Query psy793
Match_columns 414
No_of_seqs 383 out of 3785
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 22:29:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy793.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/793hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ihg_A Cyclophilin 40; ppiase 100.0 1.3E-71 4.4E-76 541.2 38.1 355 10-411 15-370 (370)
2 2wfi_A Peptidyl-prolyl CIS-tra 100.0 4.3E-52 1.5E-56 356.8 17.1 172 7-223 6-179 (179)
3 2igv_A Peptidyl-prolyl CIS-tra 100.0 6.9E-52 2.3E-56 354.0 16.6 171 9-224 2-172 (173)
4 1a58_A Cyclophilin; isomerase, 100.0 1E-51 3.5E-56 354.3 16.5 172 7-223 3-176 (177)
5 2he9_A NK-tumor recognition pr 100.0 1.4E-51 4.8E-56 356.3 17.0 176 4-224 13-190 (192)
6 2poy_A Peptidyl-prolyl CIS-tra 100.0 2.6E-51 8.9E-56 352.9 17.1 173 5-222 14-186 (186)
7 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.4E-51 8.1E-56 349.7 15.8 169 9-223 2-170 (170)
8 2cmt_A Peptidyl-prolyl CIS-tra 100.0 5.4E-51 1.8E-55 347.3 16.2 170 1-223 1-171 (172)
9 1mzw_A Cyclophilin H, U-snRNP- 100.0 5.3E-51 1.8E-55 349.4 15.4 172 5-223 5-177 (177)
10 2z6w_A Peptidyl-prolyl CIS-tra 100.0 2E-50 6.8E-55 342.3 16.3 162 9-223 2-164 (165)
11 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.2E-50 1.1E-54 343.3 16.7 165 7-224 8-173 (173)
12 3pmp_A Cyclophilin A; peptidyl 100.0 3.1E-50 1.1E-54 341.4 16.1 163 9-223 1-163 (164)
13 2haq_A Cyclophilin; rotamase, 100.0 9.1E-50 3.1E-54 338.9 16.0 163 7-223 8-172 (172)
14 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.2E-49 4.2E-54 342.7 16.4 167 6-224 18-184 (184)
15 1z81_A Cyclophilin; structural 100.0 1.3E-49 4.4E-54 351.2 15.1 171 6-223 55-229 (229)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 4E-49 1.4E-53 341.7 16.6 168 5-224 22-191 (193)
17 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.2E-49 7.7E-54 341.8 14.4 168 9-229 14-183 (188)
18 4fru_A Cyclophilin B, peptidyl 100.0 3.8E-49 1.3E-53 341.1 13.8 173 7-231 9-182 (185)
19 2ose_A Probable peptidyl-proly 100.0 1.9E-47 6.6E-52 340.3 14.0 178 3-227 7-210 (234)
20 2c3b_A Ppiase, cyclophilin; is 100.0 6.9E-48 2.4E-52 328.5 10.6 160 12-223 4-172 (172)
21 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.5E-45 5.3E-50 311.3 12.5 151 21-227 6-159 (161)
22 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.5E-45 8.5E-50 311.0 13.2 154 9-223 10-165 (166)
23 2poe_A Cyclophilin-like protei 100.0 3.5E-45 1.2E-49 314.8 12.2 152 22-228 23-179 (185)
24 2b71_A Cyclophilin-like protei 100.0 4.5E-45 1.5E-49 315.9 12.7 158 8-226 36-195 (196)
25 2fu0_A Cyclophilin, putative; 100.0 8.9E-45 3.1E-49 305.7 13.2 152 10-222 5-158 (160)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 8.8E-45 3E-49 313.9 13.0 158 8-226 17-177 (197)
27 2a2n_A Peptidylprolyl isomeras 100.0 3.1E-44 1.1E-48 306.4 14.6 153 8-221 19-174 (176)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 3.2E-44 1.1E-48 311.4 13.8 159 9-228 10-170 (203)
29 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.2E-44 1.1E-48 309.7 13.2 162 7-222 20-190 (191)
30 3bo7_A Peptidyl-prolyl CIS-tra 100.0 3E-44 1E-48 313.9 12.2 159 9-228 5-177 (201)
31 1v9t_A Cyclophilin B; beta bar 100.0 1.1E-43 3.7E-48 301.9 11.4 154 8-223 2-165 (166)
32 2hq6_A Serologically defined c 100.0 1.9E-43 6.5E-48 303.7 12.6 159 7-227 21-183 (185)
33 3bkp_A Cyclophilin; malaria, i 100.0 2.4E-42 8.3E-47 306.7 11.9 162 7-229 18-198 (232)
34 1lop_A Cyclophilin A; rotamase 100.0 1.3E-42 4.5E-47 294.6 9.7 145 21-223 5-163 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 3E-42 1E-46 293.9 11.9 152 9-222 2-166 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 9.6E-38 3.3E-42 292.5 11.2 177 3-219 163-355 (369)
37 3rkv_A Putative peptidylprolyl 99.9 7.9E-23 2.7E-27 174.0 14.5 156 257-412 4-162 (162)
38 4gco_A Protein STI-1; structur 99.9 7.1E-21 2.4E-25 155.3 14.0 115 262-392 11-125 (126)
39 2hr2_A Hypothetical protein; a 99.8 7E-21 2.4E-25 159.5 12.8 141 257-401 4-155 (159)
40 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 9.3E-19 3.2E-23 174.3 20.9 157 256-413 260-416 (457)
41 1p5q_A FKBP52, FK506-binding p 99.8 2.7E-18 9.2E-23 164.0 20.9 155 257-412 140-294 (336)
42 2fbn_A 70 kDa peptidylprolyl i 99.8 4.9E-18 1.7E-22 149.1 19.5 159 255-413 29-187 (198)
43 4gcn_A Protein STI-1; structur 99.8 1E-17 3.6E-22 136.5 13.2 115 260-391 4-125 (127)
44 3upv_A Heat shock protein STI1 99.7 1.7E-17 5.6E-22 134.5 13.7 117 263-395 3-125 (126)
45 2if4_A ATFKBP42; FKBP-like, al 99.7 3.3E-18 1.1E-22 163.5 11.1 160 253-412 168-328 (338)
46 3gyz_A Chaperone protein IPGC; 99.7 1.9E-16 6.6E-21 133.1 14.7 104 263-382 35-138 (151)
47 3sz7_A HSC70 cochaperone (SGT) 99.7 1.5E-16 5.1E-21 135.1 14.3 123 262-400 9-133 (164)
48 4ga2_A E3 SUMO-protein ligase 99.7 1E-16 3.4E-21 134.6 9.9 115 264-394 31-146 (150)
49 2xcb_A PCRH, regulatory protei 99.7 6E-16 2E-20 128.3 14.1 122 263-400 17-138 (142)
50 2vgx_A Chaperone SYCD; alterna 99.7 5.3E-16 1.8E-20 129.9 13.3 119 263-397 20-138 (148)
51 4ga2_A E3 SUMO-protein ligase 99.7 1.5E-16 5E-21 133.6 9.8 118 270-403 3-120 (150)
52 3q49_B STIP1 homology and U bo 99.7 5.5E-16 1.9E-20 126.8 12.2 122 264-401 9-135 (137)
53 3urz_A Uncharacterized protein 99.7 4.2E-15 1.4E-19 131.6 18.7 119 264-398 4-138 (208)
54 4gyw_A UDP-N-acetylglucosamine 99.6 2.9E-15 9.9E-20 156.4 15.2 124 262-401 7-130 (723)
55 1elw_A TPR1-domain of HOP; HOP 99.6 1.2E-14 4.2E-19 114.6 13.8 115 263-393 3-117 (118)
56 1a17_A Serine/threonine protei 99.6 4.1E-14 1.4E-18 119.0 17.5 127 257-399 6-134 (166)
57 2vyi_A SGTA protein; chaperone 99.6 2.2E-14 7.5E-19 115.2 15.0 122 260-397 8-129 (131)
58 2dba_A Smooth muscle cell asso 99.6 4.8E-14 1.6E-18 116.2 16.0 116 264-392 28-143 (148)
59 1hxi_A PEX5, peroxisome target 99.6 6.7E-15 2.3E-19 118.7 10.2 101 267-383 20-120 (121)
60 2lni_A Stress-induced-phosphop 99.6 8E-15 2.7E-19 118.5 10.7 116 264-395 16-131 (133)
61 2pl2_A Hypothetical conserved 99.6 7.8E-15 2.7E-19 130.7 11.2 118 267-401 42-170 (217)
62 4gyw_A UDP-N-acetylglucosamine 99.6 1.2E-14 4.1E-19 151.8 13.8 122 264-401 43-164 (723)
63 1elr_A TPR2A-domain of HOP; HO 99.6 3.4E-14 1.1E-18 114.2 13.2 119 263-398 3-128 (131)
64 1zu2_A Mitochondrial import re 99.6 2.1E-14 7.1E-19 119.9 11.2 111 275-401 13-144 (158)
65 4i17_A Hypothetical protein; T 99.6 5.6E-14 1.9E-18 125.5 14.7 122 265-402 8-137 (228)
66 2pl2_A Hypothetical conserved 99.5 8.5E-14 2.9E-18 123.9 15.0 98 304-402 108-205 (217)
67 3vtx_A MAMA; tetratricopeptide 99.5 8.9E-14 3E-18 119.7 14.6 141 263-403 4-162 (184)
68 2xev_A YBGF; tetratricopeptide 99.5 4.9E-14 1.7E-18 113.8 12.1 115 266-393 4-121 (129)
69 2h6f_A Protein farnesyltransfe 99.5 3.6E-14 1.2E-18 137.5 11.5 120 263-398 96-216 (382)
70 1na0_A Designed protein CTPR3; 99.5 3.7E-13 1.3E-17 106.9 14.9 115 264-394 9-123 (125)
71 2h6f_A Protein farnesyltransfe 99.5 8.7E-14 3E-18 134.9 13.0 116 264-395 131-247 (382)
72 3gyz_A Chaperone protein IPGC; 99.5 2.4E-14 8.3E-19 120.2 7.3 94 310-403 32-125 (151)
73 2c2l_A CHIP, carboxy terminus 99.5 9.9E-14 3.4E-18 128.8 12.1 102 264-381 4-105 (281)
74 3k9i_A BH0479 protein; putativ 99.5 8.5E-14 2.9E-18 111.1 9.2 103 276-391 2-104 (117)
75 1wao_1 Serine/threonine protei 99.5 5.7E-14 1.9E-18 140.3 10.0 115 262-392 4-118 (477)
76 4i17_A Hypothetical protein; T 99.5 3.8E-13 1.3E-17 120.0 13.9 118 265-398 43-169 (228)
77 3vtx_A MAMA; tetratricopeptide 99.5 7.4E-13 2.5E-17 113.9 14.8 120 264-383 39-176 (184)
78 4gco_A Protein STI-1; structur 99.5 3.7E-13 1.3E-17 109.2 12.1 95 309-403 8-102 (126)
79 3urz_A Uncharacterized protein 99.4 1.2E-12 4.2E-17 115.6 14.3 107 268-391 58-199 (208)
80 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1E-12 3.4E-17 115.7 13.0 122 263-403 5-142 (213)
81 2e2e_A Formate-dependent nitri 99.4 2.2E-12 7.6E-17 110.3 14.1 112 264-391 44-158 (177)
82 3uq3_A Heat shock protein STI1 99.4 5.8E-12 2E-16 113.4 16.4 139 264-402 79-227 (258)
83 2fo7_A Synthetic consensus TPR 99.4 3.8E-12 1.3E-16 102.1 13.7 123 265-403 2-124 (136)
84 2kck_A TPR repeat; tetratricop 99.4 7.6E-13 2.6E-17 103.1 9.2 100 266-381 8-110 (112)
85 2vgx_A Chaperone SYCD; alterna 99.4 7E-13 2.4E-17 110.7 9.0 94 310-403 17-110 (148)
86 4abn_A Tetratricopeptide repea 99.4 2.6E-12 9.1E-17 128.2 14.7 122 265-402 171-312 (474)
87 3as5_A MAMA; tetratricopeptide 99.4 6.9E-12 2.4E-16 106.7 14.9 123 264-402 42-164 (186)
88 3uq3_A Heat shock protein STI1 99.4 3.1E-12 1.1E-16 115.2 13.1 113 263-391 138-256 (258)
89 4abn_A Tetratricopeptide repea 99.4 3.4E-12 1.2E-16 127.4 14.1 123 264-403 102-242 (474)
90 2vsy_A XCC0866; transferase, g 99.4 5E-12 1.7E-16 128.9 14.9 123 264-402 23-148 (568)
91 1xnf_A Lipoprotein NLPI; TPR, 99.4 1.3E-11 4.4E-16 112.4 16.1 114 262-391 41-154 (275)
92 2pzi_A Probable serine/threoni 99.4 1.3E-12 4.4E-17 136.3 10.4 122 265-403 434-555 (681)
93 3qky_A Outer membrane assembly 99.4 2.4E-12 8E-17 117.5 10.9 126 264-402 15-168 (261)
94 3qky_A Outer membrane assembly 99.4 1.8E-11 6E-16 111.7 16.6 119 264-395 52-198 (261)
95 1hh8_A P67PHOX, NCF-2, neutrop 99.4 7.3E-12 2.5E-16 110.1 13.4 104 264-383 37-156 (213)
96 1fch_A Peroxisomal targeting s 99.3 5.1E-12 1.7E-16 120.4 12.5 124 264-403 217-351 (368)
97 3ieg_A DNAJ homolog subfamily 99.3 1.8E-11 6.2E-16 115.5 16.3 123 265-399 235-357 (359)
98 2q7f_A YRRB protein; TPR, prot 99.3 1.7E-11 5.7E-16 109.5 15.1 121 264-400 57-177 (243)
99 2yhc_A BAMD, UPF0169 lipoprote 99.3 1.6E-11 5.6E-16 109.6 14.3 110 264-386 4-134 (225)
100 3as5_A MAMA; tetratricopeptide 99.3 7.9E-12 2.7E-16 106.3 11.5 124 263-402 7-130 (186)
101 4eqf_A PEX5-related protein; a 99.3 6.3E-12 2.2E-16 120.1 12.1 124 264-403 213-348 (365)
102 2e2e_A Formate-dependent nitri 99.3 1.9E-12 6.4E-17 110.8 7.3 119 269-403 15-136 (177)
103 2xcb_A PCRH, regulatory protei 99.3 4.8E-12 1.7E-16 104.5 9.5 94 310-403 14-107 (142)
104 2l6j_A TPR repeat-containing p 99.3 7.8E-13 2.7E-17 103.5 4.2 94 264-373 4-103 (111)
105 4eqf_A PEX5-related protein; a 99.3 8.1E-12 2.8E-16 119.3 12.1 120 267-402 180-301 (365)
106 2q7f_A YRRB protein; TPR, prot 99.3 1.3E-11 4.3E-16 110.3 12.6 123 264-402 91-213 (243)
107 2pzi_A Probable serine/threoni 99.3 1.2E-12 4E-17 136.6 6.6 113 265-394 468-580 (681)
108 2kat_A Uncharacterized protein 99.3 1.4E-11 4.7E-16 97.6 11.2 103 282-400 3-107 (115)
109 2vq2_A PILW, putative fimbrial 99.3 3.4E-11 1.2E-15 105.9 14.8 138 264-401 8-166 (225)
110 2ho1_A Type 4 fimbrial biogene 99.3 2.9E-11 1E-15 108.9 14.6 135 266-400 73-227 (252)
111 2r5s_A Uncharacterized protein 99.3 1.3E-11 4.3E-16 105.8 11.5 120 266-401 8-163 (176)
112 3qou_A Protein YBBN; thioredox 99.3 1.8E-11 6E-16 113.8 13.1 122 264-401 117-274 (287)
113 3upv_A Heat shock protein STI1 99.3 2.8E-11 9.7E-16 97.3 12.4 92 312-403 2-93 (126)
114 2vq2_A PILW, putative fimbrial 99.3 4.1E-11 1.4E-15 105.4 14.6 92 310-401 109-201 (225)
115 3ieg_A DNAJ homolog subfamily 99.3 2.4E-11 8.3E-16 114.6 13.8 111 264-390 3-116 (359)
116 3u4t_A TPR repeat-containing p 99.3 7.3E-12 2.5E-16 114.1 9.8 123 267-389 6-149 (272)
117 1w3b_A UDP-N-acetylglucosamine 99.3 1.8E-11 6E-16 118.1 12.8 117 264-396 67-183 (388)
118 2ho1_A Type 4 fimbrial biogene 99.3 2.2E-11 7.4E-16 109.8 12.5 139 263-401 36-194 (252)
119 3cv0_A Peroxisome targeting si 99.3 3E-11 1E-15 112.7 13.7 123 264-402 172-306 (327)
120 1w3b_A UDP-N-acetylglucosamine 99.3 3E-11 1E-15 116.4 14.1 139 264-402 169-325 (388)
121 1qqe_A Vesicular transport pro 99.3 5.2E-11 1.8E-15 110.8 15.2 130 263-402 76-219 (292)
122 3u4t_A TPR repeat-containing p 99.3 3.5E-11 1.2E-15 109.6 13.5 118 264-397 74-191 (272)
123 1hxi_A PEX5, peroxisome target 99.3 8.7E-11 3E-15 94.3 13.6 92 316-408 19-110 (121)
124 4gcn_A Protein STI-1; structur 99.3 1.9E-11 6.5E-16 99.0 9.8 91 311-401 5-102 (127)
125 1qqe_A Vesicular transport pro 99.3 5.3E-11 1.8E-15 110.7 14.1 135 258-402 31-178 (292)
126 2gw1_A Mitochondrial precursor 99.3 5E-11 1.7E-15 118.6 14.8 107 261-384 3-109 (514)
127 3edt_B KLC 2, kinesin light ch 99.3 5.7E-11 2E-15 108.1 14.0 133 262-402 41-189 (283)
128 3hym_B Cell division cycle pro 99.3 3E-11 1E-15 112.9 12.2 123 264-393 193-315 (330)
129 3mkr_A Coatomer subunit epsilo 99.3 6E-11 2.1E-15 110.5 14.2 119 264-400 130-252 (291)
130 2y4t_A DNAJ homolog subfamily 99.3 9.4E-11 3.2E-15 114.9 15.9 120 266-397 259-378 (450)
131 2yhc_A BAMD, UPF0169 lipoprote 99.2 6E-11 2E-15 105.9 13.1 132 264-409 41-210 (225)
132 1na3_A Designed protein CTPR2; 99.2 9.5E-11 3.2E-15 87.9 11.9 85 311-395 6-90 (91)
133 2y4t_A DNAJ homolog subfamily 99.2 1.8E-10 6.3E-15 112.8 16.9 114 262-391 24-140 (450)
134 3hym_B Cell division cycle pro 99.2 5.8E-11 2E-15 110.9 12.5 123 265-403 91-214 (330)
135 2l6j_A TPR repeat-containing p 99.2 1.2E-10 4.2E-15 90.7 12.2 83 314-396 4-92 (111)
136 4g1t_A Interferon-induced prot 99.2 1.2E-10 4.2E-15 115.0 15.1 127 264-397 51-187 (472)
137 3fp2_A TPR repeat-containing p 99.2 6.3E-11 2.1E-15 118.8 12.9 115 254-385 15-129 (537)
138 2fo7_A Synthetic consensus TPR 99.2 1.4E-10 4.6E-15 92.8 12.3 101 265-381 36-136 (136)
139 2hr2_A Hypothetical protein; a 99.2 9.5E-11 3.3E-15 97.9 11.3 92 312-403 9-123 (159)
140 3sz7_A HSC70 cochaperone (SGT) 99.2 1.4E-10 4.8E-15 97.9 12.7 94 310-403 7-100 (164)
141 1fch_A Peroxisomal targeting s 99.2 1.3E-10 4.5E-15 110.5 13.9 118 269-403 187-306 (368)
142 1xnf_A Lipoprotein NLPI; TPR, 99.2 7.8E-11 2.7E-15 107.2 11.8 122 270-403 11-132 (275)
143 3ro3_A PINS homolog, G-protein 99.2 3.8E-10 1.3E-14 93.3 14.5 132 261-402 6-149 (164)
144 3edt_B KLC 2, kinesin light ch 99.2 2.7E-10 9.1E-15 103.6 14.1 139 262-409 83-278 (283)
145 1p5q_A FKBP52, FK506-binding p 99.2 2.6E-11 8.7E-16 115.4 7.4 112 276-403 125-251 (336)
146 3ma5_A Tetratricopeptide repea 99.2 1.1E-10 3.8E-15 90.2 9.7 85 310-394 3-89 (100)
147 2vsy_A XCC0866; transferase, g 99.2 9.6E-11 3.3E-15 119.4 11.3 111 277-403 2-112 (568)
148 3fp2_A TPR repeat-containing p 99.1 2E-10 6.9E-15 115.1 12.8 144 259-402 238-398 (537)
149 3cv0_A Peroxisome targeting si 99.1 4.8E-10 1.6E-14 104.4 14.5 115 273-403 147-261 (327)
150 3ulq_A Response regulator aspa 99.1 4.3E-10 1.5E-14 108.4 14.5 132 262-402 141-284 (383)
151 3mkr_A Coatomer subunit epsilo 99.1 3.8E-10 1.3E-14 105.0 12.8 99 273-387 175-274 (291)
152 3q49_B STIP1 homology and U bo 99.1 3.2E-10 1.1E-14 92.0 10.8 93 310-402 5-97 (137)
153 3u3w_A Transcriptional activat 99.1 4.6E-10 1.6E-14 104.3 13.2 107 263-378 154-267 (293)
154 2kc7_A BFR218_protein; tetratr 99.1 5.4E-11 1.9E-15 91.2 5.5 68 318-385 4-72 (99)
155 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 6.5E-11 2.2E-15 117.5 6.8 112 276-403 246-372 (457)
156 2xpi_A Anaphase-promoting comp 99.1 7.8E-10 2.7E-14 112.5 15.0 124 264-403 373-496 (597)
157 3n71_A Histone lysine methyltr 99.1 1.4E-09 4.9E-14 108.2 16.4 139 257-403 302-456 (490)
158 1na3_A Designed protein CTPR2; 99.1 5E-10 1.7E-14 83.9 10.2 84 263-362 8-91 (91)
159 3nf1_A KLC 1, kinesin light ch 99.1 9E-10 3.1E-14 101.7 14.0 133 263-403 110-299 (311)
160 3nf1_A KLC 1, kinesin light ch 99.1 8.1E-10 2.8E-14 102.1 13.3 133 263-403 68-216 (311)
161 2gw1_A Mitochondrial precursor 99.1 8.4E-10 2.9E-14 109.7 13.7 113 266-394 374-495 (514)
162 2ifu_A Gamma-SNAP; membrane fu 99.1 6.1E-10 2.1E-14 104.3 11.6 68 314-382 155-228 (307)
163 2fbn_A 70 kDa peptidylprolyl i 99.1 4.3E-10 1.5E-14 98.0 9.7 114 274-403 14-143 (198)
164 3u3w_A Transcriptional activat 99.1 5.4E-10 1.8E-14 103.8 10.8 125 264-398 115-252 (293)
165 3q15_A PSP28, response regulat 99.1 2.8E-09 9.7E-14 102.5 16.0 108 262-379 180-292 (378)
166 3ulq_A Response regulator aspa 99.1 2.3E-09 8E-14 103.2 15.3 107 262-378 182-294 (383)
167 2kc7_A BFR218_protein; tetratr 99.1 1.4E-09 4.9E-14 83.1 11.0 70 305-382 25-95 (99)
168 3rkv_A Putative peptidylprolyl 99.1 8.1E-10 2.8E-14 92.9 10.5 92 312-403 9-118 (162)
169 3q15_A PSP28, response regulat 99.1 1.6E-09 5.4E-14 104.3 13.9 133 261-402 138-281 (378)
170 3gw4_A Uncharacterized protein 99.0 1.6E-09 5.5E-14 93.8 12.5 130 263-402 25-167 (203)
171 2xpi_A Anaphase-promoting comp 99.0 1.6E-09 5.3E-14 110.2 14.2 139 264-402 407-570 (597)
172 1pc2_A Mitochondria fission pr 99.0 5.4E-10 1.8E-14 92.2 8.6 104 278-397 12-120 (152)
173 2kck_A TPR repeat; tetratricop 99.0 1.5E-10 5.3E-15 89.8 5.0 92 312-403 4-98 (112)
174 2ifu_A Gamma-SNAP; membrane fu 99.0 2.6E-09 8.8E-14 100.0 14.0 131 261-402 73-215 (307)
175 2lni_A Stress-induced-phosphop 99.0 1.4E-09 4.7E-14 87.2 10.4 94 310-403 12-105 (133)
176 1a17_A Serine/threonine protei 99.0 1.5E-09 5.2E-14 90.6 11.0 98 264-377 47-146 (166)
177 1elw_A TPR1-domain of HOP; HOP 99.0 3.5E-09 1.2E-13 82.6 12.4 90 314-403 4-93 (118)
178 2qfc_A PLCR protein; TPR, HTH, 99.0 2E-09 6.9E-14 99.9 12.6 129 263-401 114-255 (293)
179 4a1s_A PINS, partner of inscut 99.0 1.2E-09 4.2E-14 105.6 11.5 125 261-397 45-181 (411)
180 2vyi_A SGTA protein; chaperone 99.0 4.4E-09 1.5E-13 83.6 12.5 94 310-403 8-101 (131)
181 2qfc_A PLCR protein; TPR, HTH, 99.0 2.1E-09 7.2E-14 99.7 11.9 107 263-378 154-267 (293)
182 3sf4_A G-protein-signaling mod 99.0 5E-09 1.7E-13 100.6 14.7 130 263-402 186-327 (406)
183 2ond_A Cleavage stimulation fa 99.0 1.9E-09 6.6E-14 100.8 11.4 119 265-399 100-220 (308)
184 2xev_A YBGF; tetratricopeptide 99.0 4.1E-09 1.4E-13 84.4 11.7 89 315-403 3-97 (129)
185 3ro3_A PINS homolog, G-protein 99.0 7.4E-09 2.5E-13 85.4 13.1 108 263-380 48-161 (164)
186 1ouv_A Conserved hypothetical 99.0 7.3E-09 2.5E-13 94.6 14.0 109 264-394 6-122 (273)
187 1dce_A Protein (RAB geranylger 99.0 7.2E-09 2.5E-13 105.4 15.1 116 264-395 63-191 (567)
188 4g1t_A Interferon-induced prot 99.0 2.7E-09 9.1E-14 105.3 11.4 124 264-395 94-222 (472)
189 3ro2_A PINS homolog, G-protein 98.9 9.5E-09 3.3E-13 95.3 14.0 130 264-403 183-324 (338)
190 2ond_A Cleavage stimulation fa 98.9 6.7E-09 2.3E-13 97.1 12.8 111 265-391 51-177 (308)
191 1dce_A Protein (RAB geranylger 98.9 9.2E-09 3.1E-13 104.6 14.7 126 268-409 32-170 (567)
192 2dba_A Smooth muscle cell asso 98.9 1.1E-08 3.7E-13 83.6 12.6 93 311-403 25-120 (148)
193 3ro2_A PINS homolog, G-protein 98.9 3.7E-09 1.3E-13 98.2 10.8 122 264-397 5-138 (338)
194 2if4_A ATFKBP42; FKBP-like, al 98.9 6.3E-10 2.2E-14 105.8 5.4 103 266-384 232-335 (338)
195 3sf4_A G-protein-signaling mod 98.9 6.7E-09 2.3E-13 99.7 12.7 130 263-402 126-287 (406)
196 3qww_A SET and MYND domain-con 98.9 1.8E-08 6.2E-13 98.7 15.6 124 259-390 293-429 (433)
197 4a1s_A PINS, partner of inscut 98.9 6E-09 2.1E-13 100.7 11.8 130 262-401 164-322 (411)
198 2c2l_A CHIP, carboxy terminus 98.9 4.2E-09 1.5E-13 97.3 10.1 90 314-403 4-93 (281)
199 1wao_1 Serine/threonine protei 98.9 5.9E-10 2E-14 111.2 4.5 102 264-381 40-154 (477)
200 1elr_A TPR2A-domain of HOP; HO 98.9 7.1E-09 2.4E-13 82.5 10.1 91 313-403 3-100 (131)
201 1na0_A Designed protein CTPR3; 98.9 1.8E-08 6.2E-13 79.2 12.2 89 314-402 9-97 (125)
202 1ouv_A Conserved hypothetical 98.9 1.8E-08 6.2E-13 91.9 13.9 108 265-394 39-158 (273)
203 4f3v_A ESX-1 secretion system 98.9 1E-08 3.6E-13 94.0 11.8 108 266-389 137-248 (282)
204 3rjv_A Putative SEL1 repeat pr 98.9 1.1E-08 3.6E-13 90.4 11.5 130 264-394 18-174 (212)
205 3dra_A Protein farnesyltransfe 98.9 8.3E-09 2.8E-13 96.4 10.5 126 267-408 106-246 (306)
206 3rjv_A Putative SEL1 repeat pr 98.8 8.3E-09 2.8E-13 91.1 9.1 110 271-394 18-137 (212)
207 1zu2_A Mitochondrial import re 98.8 1.7E-08 5.8E-13 84.1 9.8 72 325-396 13-94 (158)
208 3dss_A Geranylgeranyl transfer 98.8 1.5E-07 5.3E-12 88.5 16.9 100 280-395 90-192 (331)
209 3dra_A Protein farnesyltransfe 98.8 3.8E-08 1.3E-12 91.9 12.6 117 265-397 68-195 (306)
210 2v5f_A Prolyl 4-hydroxylase su 98.8 4.7E-08 1.6E-12 75.9 11.2 83 314-396 5-94 (104)
211 2r5s_A Uncharacterized protein 98.8 1.9E-08 6.5E-13 85.7 9.6 113 264-376 40-172 (176)
212 3qwp_A SET and MYND domain-con 98.8 6.6E-08 2.2E-12 94.8 14.4 120 263-390 286-418 (429)
213 3q7a_A Farnesyltransferase alp 98.8 9.9E-08 3.4E-12 90.3 14.5 110 274-399 64-176 (349)
214 3gw4_A Uncharacterized protein 98.8 8.2E-08 2.8E-12 82.8 12.8 109 262-379 64-178 (203)
215 1ihg_A Cyclophilin 40; ppiase 98.8 2.8E-08 9.7E-13 95.6 10.7 90 314-403 223-328 (370)
216 3k9i_A BH0479 protein; putativ 98.8 2.1E-08 7.2E-13 79.3 8.2 75 262-352 25-99 (117)
217 2v5f_A Prolyl 4-hydroxylase su 98.7 7.4E-08 2.5E-12 74.8 10.3 83 264-355 5-87 (104)
218 4f3v_A ESX-1 secretion system 98.7 3.4E-08 1.2E-12 90.5 9.7 126 266-409 104-234 (282)
219 1hz4_A MALT regulatory protein 98.7 3.7E-07 1.3E-11 87.1 16.5 129 263-401 52-193 (373)
220 3dss_A Geranylgeranyl transfer 98.7 1.2E-07 4.2E-12 89.1 12.7 108 274-397 39-159 (331)
221 3bee_A Putative YFRE protein; 98.7 6.3E-08 2.2E-12 73.6 8.4 73 311-383 3-78 (93)
222 3ma5_A Tetratricopeptide repea 98.7 4.5E-08 1.6E-12 75.2 7.2 81 264-360 7-89 (100)
223 1nzn_A CGI-135 protein, fissio 98.7 1.8E-07 6.1E-12 74.3 10.4 104 278-397 15-123 (126)
224 3q7a_A Farnesyltransferase alp 98.6 1E-07 3.6E-12 90.1 10.5 117 265-397 89-216 (349)
225 3qou_A Protein YBBN; thioredox 98.6 8.9E-08 3E-12 88.6 8.9 113 264-376 151-283 (287)
226 1klx_A Cysteine rich protein B 98.6 4E-07 1.4E-11 74.5 11.4 98 270-389 31-136 (138)
227 2ooe_A Cleavage stimulation fa 98.6 2.3E-07 7.7E-12 93.4 11.5 129 264-409 321-451 (530)
228 1hz4_A MALT regulatory protein 98.6 3.7E-07 1.3E-11 87.0 12.6 136 257-403 7-156 (373)
229 2kat_A Uncharacterized protein 98.5 5E-07 1.7E-11 70.8 10.2 71 332-402 3-73 (115)
230 3n71_A Histone lysine methyltr 98.5 3.6E-07 1.2E-11 91.0 10.6 114 262-383 349-470 (490)
231 2xm6_A Protein corresponding t 98.5 7.6E-07 2.6E-11 88.6 12.1 80 313-394 362-452 (490)
232 2ooe_A Cleavage stimulation fa 98.5 1.8E-06 6.2E-11 86.7 14.3 112 281-409 255-382 (530)
233 2xm6_A Protein corresponding t 98.3 6E-06 2E-10 82.1 13.9 107 265-393 76-194 (490)
234 3ly7_A Transcriptional activat 98.3 5.2E-06 1.8E-10 78.5 12.6 118 265-383 197-345 (372)
235 3o48_A Mitochondria fission 1 98.3 8E-06 2.7E-10 65.0 11.7 85 314-398 40-128 (134)
236 1klx_A Cysteine rich protein B 98.3 2.4E-06 8.1E-11 69.8 9.0 94 277-394 8-105 (138)
237 3e4b_A ALGK; tetratricopeptide 98.3 2.7E-06 9.2E-11 84.0 11.0 121 266-393 178-329 (452)
238 1y8m_A FIS1; mitochondria, unk 98.3 1.4E-05 4.8E-10 64.4 12.0 84 314-397 39-126 (144)
239 4b4t_Q 26S proteasome regulato 98.2 1E-05 3.5E-10 78.4 13.5 137 260-396 51-223 (434)
240 3u64_A Protein TP_0956; tetrat 98.2 5.7E-06 1.9E-10 75.3 9.5 90 276-381 175-273 (301)
241 1pc2_A Mitochondria fission pr 98.2 1.3E-05 4.3E-10 66.0 10.4 78 264-357 32-114 (152)
242 3e4b_A ALGK; tetratricopeptide 98.1 1.3E-05 4.3E-10 79.1 11.8 105 265-393 249-365 (452)
243 4b4t_Q 26S proteasome regulato 98.1 1.2E-05 4.3E-10 77.8 11.0 104 264-377 135-238 (434)
244 1xi4_A Clathrin heavy chain; a 98.1 2E-05 7E-10 85.6 12.6 124 268-397 1053-1182(1630)
245 3ffl_A Anaphase-promoting comp 98.1 6.8E-05 2.3E-09 62.1 13.0 118 267-392 23-165 (167)
246 3mv2_B Coatomer subunit epsilo 98.1 2.5E-05 8.7E-10 72.4 11.5 122 267-405 103-234 (310)
247 1xi4_A Clathrin heavy chain; a 98.1 3.3E-05 1.1E-09 84.0 13.6 107 266-396 1197-1328(1630)
248 3mv2_B Coatomer subunit epsilo 97.9 6.2E-05 2.1E-09 69.8 11.4 115 264-397 136-270 (310)
249 3qwp_A SET and MYND domain-con 97.8 5.6E-05 1.9E-09 73.9 9.9 92 262-361 327-426 (429)
250 3bee_A Putative YFRE protein; 97.8 4.6E-05 1.6E-09 57.5 7.0 69 264-348 6-77 (93)
251 1b89_A Protein (clathrin heavy 97.8 0.00014 4.9E-09 70.5 11.1 109 263-396 147-255 (449)
252 3u64_A Protein TP_0956; tetrat 97.7 0.00012 4.1E-09 66.6 9.6 66 329-394 178-251 (301)
253 3qww_A SET and MYND domain-con 97.7 0.00011 3.8E-09 71.8 9.8 74 262-343 338-411 (433)
254 1b89_A Protein (clathrin heavy 97.4 0.00026 8.8E-09 68.7 8.0 103 266-401 124-226 (449)
255 1nzn_A CGI-135 protein, fissio 97.3 0.0014 4.7E-08 51.9 9.3 45 312-356 72-116 (126)
256 2ff4_A Probable regulatory pro 97.3 0.0032 1.1E-07 60.5 13.9 113 264-376 115-233 (388)
257 3ffl_A Anaphase-promoting comp 97.2 0.0019 6.5E-08 53.4 9.3 94 263-358 62-165 (167)
258 3o48_A Mitochondria fission 1 97.1 0.0048 1.6E-07 49.0 10.1 46 312-357 76-121 (134)
259 4h7y_A Dual specificity protei 97.0 0.011 3.8E-07 47.9 12.0 119 257-385 13-131 (161)
260 4e6h_A MRNA 3'-END-processing 97.0 0.022 7.6E-07 58.7 17.5 142 269-411 383-532 (679)
261 1y8m_A FIS1; mitochondria, unk 96.8 0.0088 3E-07 48.1 9.8 44 312-355 75-118 (144)
262 4e6h_A MRNA 3'-END-processing 96.7 0.01 3.5E-07 61.2 11.8 82 280-377 325-407 (679)
263 4gns_B Protein CSD3, chitin bi 96.4 0.025 8.6E-07 58.6 12.2 64 311-374 334-397 (754)
264 3ly7_A Transcriptional activat 96.1 0.013 4.5E-07 55.3 8.0 67 265-348 278-344 (372)
265 3txn_A 26S proteasome regulato 95.6 0.12 4E-06 49.4 12.0 99 269-377 104-210 (394)
266 2uy1_A Cleavage stimulation fa 95.4 0.48 1.6E-05 46.7 16.6 128 266-395 215-367 (493)
267 1ya0_A SMG-7 transcript varian 95.4 0.098 3.3E-06 51.6 11.2 81 315-395 153-233 (497)
268 3kae_A CDC27, possible protein 95.3 0.23 8E-06 41.0 11.2 72 314-385 62-151 (242)
269 1zbp_A Hypothetical protein VP 94.9 0.19 6.5E-06 44.9 10.5 70 322-391 5-74 (273)
270 3mv2_A Coatomer subunit alpha; 94.5 0.49 1.7E-05 43.4 12.3 119 267-386 117-245 (325)
271 4b4t_R RPN7, 26S proteasome re 94.3 0.2 7E-06 48.5 10.3 99 267-378 134-238 (429)
272 4gns_B Protein CSD3, chitin bi 94.3 0.063 2.1E-06 55.6 6.7 61 264-340 337-397 (754)
273 2v6y_A AAA family ATPase, P60 94.0 0.21 7.2E-06 36.2 7.2 40 257-296 3-43 (83)
274 1zbp_A Hypothetical protein VP 93.5 0.48 1.6E-05 42.3 10.0 63 271-349 4-66 (273)
275 3mkr_B Coatomer subunit alpha; 93.2 4.4 0.00015 37.0 16.2 116 267-383 105-233 (320)
276 3txn_A 26S proteasome regulato 93.0 1.1 3.6E-05 42.8 12.4 139 259-397 14-191 (394)
277 2uy1_A Cleavage stimulation fa 92.6 1.1 3.8E-05 44.1 12.4 112 265-397 287-399 (493)
278 2w2u_A Hypothetical P60 katani 92.6 0.45 1.5E-05 34.4 7.0 40 257-296 12-51 (83)
279 4g26_A Pentatricopeptide repea 92.2 7.1 0.00024 38.3 17.8 133 267-400 29-193 (501)
280 3lpz_A GET4 (YOR164C homolog); 92.2 4.4 0.00015 37.5 14.9 110 258-371 29-159 (336)
281 2cpt_A SKD1 protein, vacuolar 92.2 0.95 3.3E-05 35.0 8.9 40 259-298 13-52 (117)
282 4b4t_P 26S proteasome regulato 92.0 3 0.0001 40.4 14.6 105 263-377 136-247 (445)
283 1wfd_A Hypothetical protein 15 92.0 1.2 4E-05 33.0 8.9 39 260-298 11-49 (93)
284 2v6x_A Vacuolar protein sortin 91.8 0.85 2.9E-05 33.0 7.9 38 259-296 8-45 (85)
285 4g26_A Pentatricopeptide repea 91.4 1.5 5.2E-05 43.2 11.8 102 267-383 108-212 (501)
286 2ff4_A Probable regulatory pro 91.3 2.6 8.8E-05 40.0 12.9 86 317-402 118-225 (388)
287 4a5x_A MITD1, MIT domain-conta 90.7 1.3 4.5E-05 32.2 7.9 37 262-298 14-50 (86)
288 2wpv_A GET4, UPF0363 protein Y 89.7 8 0.00027 35.4 14.1 101 261-372 30-158 (312)
289 1ya0_A SMG-7 transcript varian 87.8 1.7 5.8E-05 42.7 8.8 82 263-360 151-232 (497)
290 3kae_A CDC27, possible protein 87.4 11 0.00038 31.1 12.1 81 316-401 35-133 (242)
291 3mkq_A Coatomer beta'-subunit; 84.5 3.7 0.00013 42.4 9.9 26 315-340 682-707 (814)
292 3mkq_B Coatomer subunit alpha; 84.5 9.8 0.00034 31.6 10.5 48 324-376 15-62 (177)
293 3mkq_A Coatomer beta'-subunit; 83.9 2.3 8E-05 43.9 8.1 18 357-374 745-762 (814)
294 1wy6_A Hypothetical protein ST 83.5 7.7 0.00026 30.9 8.7 53 326-378 103-155 (172)
295 3rau_A Tyrosine-protein phosph 83.4 24 0.00084 32.9 14.1 118 259-376 112-280 (363)
296 4b4t_S RPN3, 26S proteasome re 82.8 2.2 7.5E-05 41.9 6.7 71 312-382 229-304 (523)
297 2crb_A Nuclear receptor bindin 81.5 13 0.00045 27.0 9.0 40 261-300 12-51 (97)
298 2dl1_A Spartin; SPG20, MIT, st 81.5 13 0.00043 28.4 9.1 77 257-333 15-97 (116)
299 3mkq_B Coatomer subunit alpha; 80.3 12 0.00043 31.0 9.6 27 266-292 36-62 (177)
300 3r9m_A BRO1 domain-containing 80.2 15 0.0005 34.6 11.4 118 260-377 110-282 (376)
301 2vkj_A TM1634; membrane protei 80.0 6.3 0.00021 28.4 6.4 32 262-293 51-82 (106)
302 2wb7_A PT26-6P; extra chromoso 79.7 15 0.00051 35.5 10.9 15 281-295 449-463 (526)
303 4h7y_A Dual specificity protei 78.9 8.6 0.0003 31.1 7.8 81 264-362 61-141 (161)
304 4b4t_P 26S proteasome regulato 78.6 22 0.00076 34.1 12.4 88 312-399 135-231 (445)
305 4fhn_B Nucleoporin NUP120; pro 77.8 5.1 0.00018 43.8 8.4 106 268-373 846-963 (1139)
306 3spa_A Mtrpol, DNA-directed RN 77.5 18 0.00062 38.7 11.8 102 265-378 128-231 (1134)
307 2dl1_A Spartin; SPG20, MIT, st 76.3 4.4 0.00015 30.9 5.1 70 329-406 18-91 (116)
308 1qsa_A Protein (soluble lytic 74.6 9.4 0.00032 38.6 8.7 53 324-376 295-347 (618)
309 4b4t_R RPN7, 26S proteasome re 74.6 3.9 0.00013 39.3 5.7 75 315-389 132-211 (429)
310 3ax2_A Mitochondrial import re 71.2 6.9 0.00024 27.3 4.7 37 257-293 10-46 (73)
311 1om2_A Protein (mitochondrial 69.3 17 0.00059 26.7 6.7 38 257-294 13-50 (95)
312 3spa_A Mtrpol, DNA-directed RN 68.1 39 0.0013 36.3 11.6 95 315-410 128-228 (1134)
313 3ax2_A Mitochondrial import re 67.0 18 0.0006 25.2 6.1 37 353-389 22-58 (73)
314 2cfu_A SDSA1; SDS-hydrolase, l 65.8 16 0.00053 37.3 8.1 54 347-400 448-501 (658)
315 1zb1_A BRO1 protein; AIP1, BRO 65.6 17 0.00057 34.4 7.8 117 260-376 119-285 (392)
316 1qng_A Peptidyl-prolyl CIS-tra 64.6 1.3 4.5E-05 36.8 -0.1 24 103-126 51-74 (170)
317 2ymb_A MITD1, MIT domain-conta 62.9 1.5 5.3E-05 38.7 0.0 65 260-324 19-83 (257)
318 2igv_A Peptidyl-prolyl CIS-tra 62.6 1.6 5.4E-05 36.4 -0.0 22 105-126 54-75 (173)
319 1mzw_A Cyclophilin H, U-snRNP- 62.4 1.5 5.2E-05 36.6 -0.1 22 105-126 59-80 (177)
320 2poy_A Peptidyl-prolyl CIS-tra 62.1 1.6 5.5E-05 36.8 -0.0 24 103-126 68-91 (186)
321 3t5v_B Nuclear mRNA export pro 61.4 17 0.00057 35.2 7.0 67 315-381 177-254 (455)
322 1a58_A Cyclophilin; isomerase, 60.9 1.7 5.7E-05 36.4 -0.1 22 105-126 58-79 (177)
323 2fu0_A Cyclophilin, putative; 60.3 1.7 5.9E-05 35.6 -0.1 21 106-126 42-62 (160)
324 4a5x_A MITD1, MIT domain-conta 60.2 44 0.0015 23.9 8.9 26 352-377 20-45 (86)
325 2nnz_A Hypothetical protein; b 59.9 6.9 0.00024 31.7 3.4 30 15-47 32-61 (153)
326 2wfi_A Peptidyl-prolyl CIS-tra 58.3 1.9 6.3E-05 36.2 -0.3 22 105-126 61-82 (179)
327 2x7k_A Peptidyl-prolyl CIS-tra 57.8 1.9 6.7E-05 35.5 -0.3 21 106-126 48-68 (166)
328 2cmt_A Peptidyl-prolyl CIS-tra 57.7 1.9 6.5E-05 35.8 -0.3 21 106-126 55-75 (172)
329 2a2n_A Peptidylprolyl isomeras 57.6 2.1 7E-05 35.8 -0.1 21 106-126 58-78 (176)
330 3re2_A Predicted protein; meni 56.7 43 0.0015 31.0 8.3 64 333-396 276-350 (472)
331 2r99_A Peptidyl-prolyl CIS-tra 56.5 2.1 7.1E-05 35.6 -0.3 21 106-126 56-76 (173)
332 2ok3_A Peptidyl-prolyl CIS-tra 56.2 2.2 7.7E-05 35.0 -0.1 21 106-126 37-57 (161)
333 4b4t_S RPN3, 26S proteasome re 56.1 13 0.00044 36.5 5.2 73 264-347 231-303 (523)
334 2he9_A NK-tumor recognition pr 55.6 2.2 7.5E-05 36.1 -0.3 22 105-126 71-92 (192)
335 1w74_A Peptidyl-prolyl CIS-tra 55.5 2.1 7.2E-05 36.2 -0.4 21 105-125 74-94 (191)
336 2z6w_A Peptidyl-prolyl CIS-tra 55.4 2.2 7.5E-05 35.2 -0.3 21 106-126 48-68 (165)
337 2w2u_A Hypothetical P60 katani 54.6 32 0.0011 24.5 5.8 16 360-375 31-46 (83)
338 2xs1_A Programmed cell death 6 54.3 67 0.0023 32.9 10.5 118 259-376 122-288 (704)
339 3kop_A Uncharacterized protein 54.1 12 0.00043 30.8 3.9 32 14-47 23-55 (188)
340 2crb_A Nuclear receptor bindin 53.5 62 0.0021 23.5 9.1 29 313-341 14-42 (97)
341 1z81_A Cyclophilin; structural 53.3 2.7 9.1E-05 36.6 -0.1 22 105-126 108-129 (229)
342 3c3r_A Programmed cell death 6 53.3 71 0.0024 29.8 9.8 118 260-377 138-304 (380)
343 2hq6_A Serologically defined c 53.1 2.6 8.8E-05 35.5 -0.3 21 106-126 61-81 (185)
344 3bkp_A Cyclophilin; malaria, i 53.0 2.6 8.8E-05 36.9 -0.3 21 106-126 58-78 (232)
345 2ose_A Probable peptidyl-proly 52.7 2.6 9E-05 36.8 -0.3 21 106-126 76-96 (234)
346 2o8p_A 14-3-3 domain containin 52.4 40 0.0014 29.0 7.1 72 264-343 120-197 (227)
347 1zkc_A Peptidyl-prolyl CIS-tra 52.3 2.6 8.8E-05 35.9 -0.4 21 106-126 56-76 (197)
348 4fru_A Cyclophilin B, peptidyl 51.8 2.9 9.9E-05 35.2 -0.2 21 106-126 57-77 (185)
349 3t5x_A PCI domain-containing p 51.7 30 0.001 29.3 6.3 56 310-365 10-70 (203)
350 2ijq_A Hypothetical protein; s 51.5 87 0.003 25.4 8.7 58 320-377 38-104 (161)
351 2rpa_A Katanin P60 ATPase-cont 50.9 61 0.0021 22.7 7.9 51 351-401 15-71 (78)
352 1v9t_A Cyclophilin B; beta bar 50.9 2.6 8.8E-05 34.8 -0.6 21 106-126 41-61 (166)
353 3eab_A Spastin; spastin, MIT, 50.7 67 0.0023 23.1 7.5 70 257-326 9-84 (89)
354 1lop_A Cyclophilin A; rotamase 50.6 2.6 9E-05 34.6 -0.6 19 106-124 36-54 (164)
355 3ich_A Peptidyl-prolyl CIS-tra 50.6 3.1 0.00011 35.1 -0.2 21 106-126 60-80 (188)
356 4gq2_M Nucleoporin NUP120; bet 50.3 23 0.00079 37.8 6.5 52 320-375 816-867 (950)
357 2npm_A 14-3-3 domain containin 49.7 42 0.0014 29.6 6.9 54 280-342 172-226 (260)
358 2br9_A 14-3-3E, 14-3-3 protein 49.5 61 0.0021 28.1 7.9 55 280-342 146-201 (234)
359 2oo2_A Hypothetical protein AF 49.4 41 0.0014 24.1 5.6 37 258-294 29-65 (86)
360 2rpa_A Katanin P60 ATPase-cont 49.2 24 0.0008 24.9 4.3 34 265-298 13-46 (78)
361 2haq_A Cyclophilin; rotamase, 49.2 3.5 0.00012 34.2 -0.1 21 106-126 56-76 (172)
362 2yin_A DOCK2, dedicator of cyt 48.9 27 0.00094 33.5 6.2 96 266-361 37-139 (436)
363 2b71_A Cyclophilin-like protei 48.3 2.2 7.6E-05 36.2 -1.4 21 106-126 75-95 (196)
364 3t5x_A PCI domain-containing p 48.0 50 0.0017 27.8 7.1 33 349-381 15-47 (203)
365 2wpv_A GET4, UPF0363 protein Y 48.0 1.6E+02 0.0054 26.6 15.3 129 267-405 16-157 (312)
366 3pmp_A Cyclophilin A; peptidyl 47.9 3.5 0.00012 33.9 -0.2 21 106-126 47-67 (164)
367 2pmr_A Uncharacterized protein 47.8 45 0.0015 24.0 5.6 38 257-294 32-69 (87)
368 1qsa_A Protein (soluble lytic 47.5 74 0.0025 32.0 9.4 122 268-402 218-339 (618)
369 2xze_A STAM-binding protein; h 47.5 41 0.0014 26.8 6.1 41 255-295 31-71 (146)
370 3jq1_A SUSD superfamily protei 47.3 1.2E+02 0.0041 29.2 10.7 47 330-376 154-208 (481)
371 1om2_A Protein (mitochondrial 47.1 30 0.001 25.3 4.7 29 353-381 25-53 (95)
372 2v6y_A AAA family ATPase, P60 46.9 43 0.0015 23.7 5.5 15 367-381 37-51 (83)
373 2k7n_A Peptidyl-prolyl CIS-tra 46.3 3.3 0.00011 35.3 -0.6 21 106-126 48-68 (203)
374 2poe_A Cyclophilin-like protei 46.2 2.4 8.4E-05 35.6 -1.5 21 106-126 53-73 (185)
375 3rdd_A Peptidyl-prolyl CIS-tra 46.1 4.1 0.00014 34.2 -0.1 21 106-126 67-87 (184)
376 2vkj_A TM1634; membrane protei 45.7 59 0.002 23.4 5.8 29 314-342 53-81 (106)
377 2c3b_A Ppiase, cyclophilin; is 45.2 3.9 0.00013 33.9 -0.4 21 106-126 52-72 (172)
378 4gq2_M Nucleoporin NUP120; bet 45.2 38 0.0013 36.1 7.2 76 268-343 844-926 (950)
379 2pm7_A Protein WEB1, protein t 45.1 1.6E+02 0.0056 27.6 10.9 113 264-396 248-381 (399)
380 2cfu_A SDSA1; SDS-hydrolase, l 44.7 35 0.0012 34.7 6.5 50 315-364 450-499 (658)
381 4gq4_A Menin; tumor suppressor 44.5 1.6E+02 0.0056 27.8 10.2 55 345-399 300-360 (489)
382 3ubw_A 14-3-3E, 14-3-3 protein 44.4 41 0.0014 29.7 6.0 30 311-340 195-225 (261)
383 3hdx_A SUSD homolog, SUSD supe 44.3 1.3E+02 0.0043 29.0 10.4 48 330-377 156-226 (478)
384 3s6m_A Peptidyl-prolyl CIS-tra 44.3 3.8 0.00013 33.8 -0.6 21 106-126 40-60 (167)
385 1o9d_A 14-3-3-like protein C; 44.1 80 0.0028 27.8 7.9 54 280-341 151-205 (260)
386 2cpt_A SKD1 protein, vacuolar 43.8 1E+02 0.0036 23.3 8.8 15 362-376 32-46 (117)
387 3uzd_A 14-3-3 protein gamma; s 42.8 45 0.0015 29.2 6.0 53 281-341 148-201 (248)
388 2g0u_A Type III secretion syst 42.4 83 0.0028 22.8 6.3 40 363-402 31-70 (92)
389 3k2c_A Peptidyl-prolyl CIS-tra 42.2 4.9 0.00017 34.0 -0.2 21 106-126 72-92 (193)
390 3bo7_A Peptidyl-prolyl CIS-tra 41.7 4.7 0.00016 34.3 -0.4 18 106-123 43-60 (201)
391 3ph0_C ASCG; type III secretio 41.1 73 0.0025 20.8 6.5 53 315-368 7-60 (61)
392 3u84_A Menin; MLL, JUND, ledgf 41.0 87 0.003 29.6 7.8 64 333-396 298-372 (550)
393 3efz_A 14-3-3 protein; 14-3-3, 39.8 60 0.002 28.7 6.3 32 310-341 192-224 (268)
394 3esl_A Checkpoint serine/threo 39.8 1.7E+02 0.0058 24.6 13.7 68 310-378 76-145 (202)
395 4fhn_B Nucleoporin NUP120; pro 38.8 35 0.0012 37.2 5.8 53 319-375 817-869 (1139)
396 3qnk_A Putative lipoprotein; a 37.6 2.9E+02 0.0099 26.7 12.7 48 330-377 153-211 (517)
397 3snx_A SUSD homolog, putative 36.1 41 0.0014 32.4 5.3 31 312-342 189-219 (460)
398 3i4g_A SUSD-like carbohydrate 35.9 3E+02 0.01 26.8 11.6 48 330-377 167-227 (528)
399 2cwy_A Hypothetical protein TT 35.8 1E+02 0.0034 22.4 6.1 26 268-293 5-30 (94)
400 4aez_C MAD3, mitotic spindle c 35.5 1.5E+02 0.0052 25.4 8.1 63 310-378 116-180 (223)
401 3myv_A SUSD superfamily protei 35.1 46 0.0016 31.9 5.4 32 311-342 187-218 (454)
402 3iqu_A 14-3-3 protein sigma; s 34.9 74 0.0025 27.6 6.1 53 281-341 150-203 (236)
403 2wb7_A PT26-6P; extra chromoso 34.4 3E+02 0.01 26.6 10.6 36 329-364 454-490 (526)
404 3lxu_X Tripeptidyl-peptidase 2 34.4 3.2E+02 0.011 30.2 12.1 91 304-395 1231-1330(1354)
405 2p58_C Putative type III secre 34.2 1.4E+02 0.0049 22.2 6.6 54 318-372 11-64 (116)
406 4a1g_A Mitotic checkpoint seri 34.2 1.8E+02 0.0061 23.2 8.5 63 310-378 67-131 (152)
407 3kez_A Putative sugar binding 34.1 49 0.0017 31.8 5.5 32 311-342 193-224 (461)
408 3lpz_A GET4 (YOR164C homolog); 34.1 2.7E+02 0.0094 25.4 15.8 127 267-404 15-158 (336)
409 1wfd_A Hypothetical protein 15 34.1 1.3E+02 0.0045 21.6 8.9 18 359-376 26-43 (93)
410 2yhe_A SEC-alkyl sulfatase; hy 40.1 8.6 0.0003 39.2 0.0 52 349-400 462-513 (668)
411 2ca5_A MXIH; transport protein 33.5 1.3E+02 0.0044 21.3 6.4 29 364-392 26-54 (85)
412 2rkl_A Vacuolar protein sortin 32.7 99 0.0034 19.9 5.6 37 259-295 15-51 (53)
413 3myv_A SUSD superfamily protei 31.9 96 0.0033 29.6 7.2 47 330-376 164-218 (454)
414 2v6x_A Vacuolar protein sortin 31.8 1.3E+02 0.0045 21.0 8.9 21 356-376 21-41 (85)
415 3lew_A SUSD-like carbohydrate 31.5 49 0.0017 32.1 5.0 33 311-343 200-232 (495)
416 3ihv_A SUSD homolog; NP_813570 29.8 3.9E+02 0.013 25.8 12.3 48 330-377 163-233 (535)
417 3otn_A SUSD superfamily protei 29.6 1.4E+02 0.0048 28.7 7.9 47 330-376 160-225 (482)
418 2zan_A Vacuolar protein sortin 29.4 11 0.00039 36.2 0.0 37 260-296 7-43 (444)
419 3mcx_A SUSD superfamily protei 29.3 1.2E+02 0.004 29.2 7.3 48 330-377 176-231 (477)
420 3eab_A Spastin; spastin, MIT, 29.0 45 0.0015 24.1 3.1 66 329-406 12-85 (89)
421 3kez_A Putative sugar binding 29.0 1.1E+02 0.0036 29.4 6.9 47 330-376 170-224 (461)
422 3lew_A SUSD-like carbohydrate 28.5 1.1E+02 0.0039 29.5 7.1 49 330-378 174-233 (495)
423 3qnk_A Putative lipoprotein; a 28.1 59 0.002 31.8 5.0 32 312-343 180-211 (517)
424 2ijq_A Hypothetical protein; s 28.0 2.4E+02 0.0081 22.7 9.0 72 264-343 32-104 (161)
425 3mcx_A SUSD superfamily protei 26.9 52 0.0018 31.7 4.3 32 312-343 200-231 (477)
426 2a9u_A Ubiquitin carboxyl-term 25.8 1.4E+02 0.0047 23.7 5.7 39 256-294 34-72 (144)
427 3t5v_B Nuclear mRNA export pro 25.5 2.5E+02 0.0085 26.9 8.7 75 267-347 179-254 (455)
428 2qx5_A Nucleoporin NIC96; mRNA 25.5 2.6E+02 0.009 28.2 9.2 24 267-290 446-469 (661)
429 2uwj_G Type III export protein 25.4 1.4E+02 0.0048 22.2 5.2 50 320-370 12-61 (115)
430 3rfy_A Peptidyl-prolyl CIS-tra 24.5 12 0.00042 34.9 -0.7 21 106-127 215-235 (369)
431 3i4g_A SUSD-like carbohydrate 24.3 81 0.0028 30.9 5.1 32 312-343 196-227 (528)
432 3jys_A SUSD superfamily protei 24.0 4.9E+02 0.017 25.0 11.7 47 330-376 161-222 (499)
433 3hdx_A SUSD homolog, SUSD supe 23.5 78 0.0027 30.5 4.8 33 311-343 194-226 (478)
434 1wy6_A Hypothetical protein ST 22.7 1.2E+02 0.0041 24.1 4.7 32 313-344 124-155 (172)
435 3bu8_A Telomeric repeat-bindin 22.2 1E+02 0.0035 26.3 4.5 65 330-394 88-160 (235)
436 2npu_A FKBP12-rapamycin comple 22.1 1.8E+02 0.0063 22.3 5.7 79 315-396 41-124 (126)
437 3jq1_A SUSD superfamily protei 22.1 64 0.0022 31.2 3.9 30 313-342 179-208 (481)
438 2jpu_A ORF C02003 protein; sol 21.4 86 0.003 24.3 3.7 32 262-293 5-36 (129)
439 3re2_A Predicted protein; meni 21.2 99 0.0034 28.7 4.5 48 283-341 276-323 (472)
440 2l0c_A Putative membrane prote 20.3 69 0.0024 23.5 2.7 49 8-73 35-84 (97)
441 3snx_A SUSD homolog, putative 20.0 1.4E+02 0.0049 28.5 5.8 30 348-377 191-220 (460)
No 1
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=1.3e-71 Score=541.22 Aligned_cols=355 Identities=46% Similarity=0.793 Sum_probs=322.1
Q ss_pred CcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCC-CcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 10 NYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL-GKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 10 ~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~-~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
+|+||||++|++++.|+|+|+||++.||+||+||+.||++..|.|.. |+..||+||.||||||||||||||++.++|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g-- 92 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNG-- 92 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSS--
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCC--
Confidence 89999999999999999999999999999999999999998776532 455689999999999999999999986666
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCcc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
+||.++||..|++|.+.++|+.+|+|+||+.+ |+++|
T Consensus 93 ------------------------------------------~g~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~-~~~~~ 129 (370)
T 1ihg_A 93 ------------------------------------------TGGESIYGEKFEDENFHYKHDKEGLLSMANAG-SNTNG 129 (370)
T ss_dssp ------------------------------------------SCCCBTTBSCBCCCCCCBCCCSTTEEEECCSS-TTCBC
T ss_pred ------------------------------------------CCCCCCCCCCcCCCcCCcCCCCCeEEEEeeCC-CCCCC
Confidence 66778889999999999999999999999999 99999
Q ss_pred chhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCCCCCCCcCcccCCCCCCCCCCCCCCC
Q psy793 169 SQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQLSLNEDWGVAENDGSQDVYPPFPEDW 248 (414)
Q Consensus 169 sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l~~~~~~~i~~~~~~~d~~~~~~~~~ 248 (414)
||||||++++|||||+|||||+|++|++||++|+.+++..++|..+|+|..|+++.....|.+...+...+.++..+.++
T Consensus 130 sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~~v~I~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (370)
T 1ihg_A 130 SQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDA 209 (370)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESSCEEEEEEEEECTTCCCCCSCCSSSCCCSCSSGGGS
T ss_pred ceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccceeEEEEEEEEeccCcccccccccccccccccccccc
Confidence 99999999999999999999999999999999999998669999999999999998888888877677888999999988
Q ss_pred CCCCccCCHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh
Q psy793 249 KSNPETVQLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK 328 (414)
Q Consensus 249 ~~~~~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~ 328 (414)
...+.. .++..+.+..++.+|+.+++.|+|++|+..|++|+++.+........+......+....+|.|+|.||++++
T Consensus 210 ~~~~~~--~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g 287 (370)
T 1ihg_A 210 DVDLKD--VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMS 287 (370)
T ss_dssp SSCTTC--HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTT
T ss_pred cccccc--HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 765544 888899999999999999999999999999999999876543233344555568899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy793 329 AYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYAR 408 (414)
Q Consensus 329 ~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~ 408 (414)
+|++|+.+|++||+++|+++++|+++|.+|..+|++++|+.+|++|++++|++..++..++.++..+++..++++..+++
T Consensus 288 ~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~k 367 (370)
T 1ihg_A 288 DWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAK 367 (370)
T ss_dssp CHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred CHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhc
Q psy793 409 MFQ 411 (414)
Q Consensus 409 ~f~ 411 (414)
||+
T Consensus 368 mf~ 370 (370)
T 1ihg_A 368 MFA 370 (370)
T ss_dssp ---
T ss_pred hhC
Confidence 995
No 2
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=4.3e-52 Score=356.81 Aligned_cols=172 Identities=50% Similarity=0.845 Sum_probs=158.3
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCC-CCCcccccCCCcceEEeccceeccCCccccC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKG-KLGKALHFTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~-~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
+..||+||||+++++|+.|+|+||||++.||+||+||++||+|..+.+ ..++.+||+|+.||||+|+|||||||+..++
T Consensus 6 ~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 85 (179)
T 2wfi_A 6 KVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGN 85 (179)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCC
Confidence 457999999999999999999999999999999999999999988766 3457899999999999999999999997655
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ +++.|+||..+++|++.++|+.+|+|||||.+ |+
T Consensus 86 g--------------------------------------------~gg~si~g~~f~dE~~~~~h~~~G~lsMAn~g-p~ 120 (179)
T 2wfi_A 86 G--------------------------------------------RGGESIYGGFFEDESFAVKHNKEFLLSMANRG-KD 120 (179)
T ss_dssp S--------------------------------------------SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSS-TT
T ss_pred C--------------------------------------------CCCCcccCCcccccccCcCcCCCeEEEEEeCC-CC
Confidence 5 56678888899999999999999999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQL 223 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l 223 (414)
+++||||||++++||||++|+|||+|++||+||++|+.+++. .++|..+|+|.+||+|
T Consensus 121 tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 121 TNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred CcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 999999999999999999999999999999999999999984 5899999999999875
No 3
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=6.9e-52 Score=354.00 Aligned_cols=171 Identities=58% Similarity=0.949 Sum_probs=159.0
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.||+||||+++++++.|+|+||||++.||+||+||++||++..|.+..++..||+|+.||||+|+|||||||+..+++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G-- 79 (173)
T 2igv_A 2 SRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG-- 79 (173)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSS--
T ss_pred CCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCC--
Confidence 479999999999999999999999999999999999999987666555677799999999999999999999976655
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCcc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
+++.++||..+++|.+.++|+.+|+|||||.+ |++++
T Consensus 80 ------------------------------------------~gg~siyg~~f~dE~~~l~h~~~G~lsmAn~g-p~tng 116 (173)
T 2igv_A 80 ------------------------------------------TGGESIYGEKFPDENFKEKHTGPGVLSMANAG-PNTNG 116 (173)
T ss_dssp ------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TTCBS
T ss_pred ------------------------------------------CCCCccCCCcccCcccccCCCCCeEEEEeeCC-CCCcc
Confidence 56677888889999999999989999999999 99999
Q ss_pred chhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCCC
Q psy793 169 SQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQLS 224 (414)
Q Consensus 169 sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l~ 224 (414)
||||||++++||||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||++.
T Consensus 117 SQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 117 SQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQLK 172 (173)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEEEC
T ss_pred eEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEEeEEEc
Confidence 99999999999999999999999999999999999999889999999999999874
No 4
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1e-51 Score=354.26 Aligned_cols=172 Identities=52% Similarity=0.892 Sum_probs=157.5
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCC-CcccccCCCcceEEeccceeccCCccccC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKL-GKALHFTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~-~~~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
+..||+||||+++++|+.|+|+||||++.||+||+||++||++..+.+.. ++.+||+|+.||||+|+|||||||+..++
T Consensus 3 ~~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~ 82 (177)
T 1a58_A 3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGD 82 (177)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSS
T ss_pred CCCCcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCC
Confidence 34689999999999999999999999999999999999999987765532 45569999999999999999999997665
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ +++.++||..|++|.+.++|+.+|+|||||.+ |+
T Consensus 83 g--------------------------------------------~gg~si~g~~f~dE~~~~~h~~~G~lsmAn~g-p~ 117 (177)
T 1a58_A 83 G--------------------------------------------TGGESIYGGMFDDEEFVMKHDEPFVVSMANKG-PN 117 (177)
T ss_dssp S--------------------------------------------SCCCCTTSSCBCCCCCCSCCCSSSEEEECCSS-TT
T ss_pred C--------------------------------------------CCCCcccCCcccCcccCcccCCCeEEEEeeCC-CC
Confidence 6 56677888899999999999999999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQL 223 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l 223 (414)
+++||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+||++
T Consensus 118 tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l 176 (177)
T 1a58_A 118 TNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL 176 (177)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEE
T ss_pred CceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEE
Confidence 999999999999999999999999999999999999999984 5899999999999976
No 5
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-51 Score=356.33 Aligned_cols=176 Identities=47% Similarity=0.830 Sum_probs=158.8
Q ss_pred ccccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCC-CCCcccccCCCcceEEeccceeccCCcc
Q psy793 4 SICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKG-KLGKALHFTGSRFHRIIPQFMIQGGDIT 82 (414)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~-~~~~~~~y~~~~f~rv~~~~~iq~G~~~ 82 (414)
..+...+|+||||+.+++|+.|+|+||||++.||+||+||++||+|+.+.+ ..++.+||+|+.||||+|+|||||||+.
T Consensus 13 ~~~~~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~ 92 (192)
T 2he9_A 13 GLVPRGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFS 92 (192)
T ss_dssp ------CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTT
T ss_pred cccccCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCccc
Confidence 456778999999999999999999999999999999999999999988766 3457899999999999999999999997
Q ss_pred ccCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCC
Q psy793 83 NFNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTG 162 (414)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~ 162 (414)
.+++ +++.++||..|++|++.++|+.+|+|+|||.+
T Consensus 93 ~~~G--------------------------------------------~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~g 128 (192)
T 2he9_A 93 EGNG--------------------------------------------KGGESIYGGYFKDENFILKHDRAFLLSMANRG 128 (192)
T ss_dssp TSSS--------------------------------------------SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSS
T ss_pred CCCC--------------------------------------------CCCCcccCCcccCccccCCCCCCeEEEEEeCC
Confidence 6555 56778888899999999999999999999999
Q ss_pred CCCCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCCC
Q psy793 163 HPNTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQLS 224 (414)
Q Consensus 163 ~~~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l~ 224 (414)
|++++||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+||++.
T Consensus 129 -p~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 129 -KHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLA 190 (192)
T ss_dssp -TTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC
T ss_pred -CCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEc
Confidence 99999999999999999999999999999999999999999984 58999999999999885
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=2.6e-51 Score=352.86 Aligned_cols=173 Identities=58% Similarity=0.931 Sum_probs=157.3
Q ss_pred cccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCcccc
Q psy793 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNF 84 (414)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~ 84 (414)
.+...||+||||+++++|+.|+|+||||++.||+||+||++||+++.+.+..++..+|+|+.||||+|+|||||||+..+
T Consensus 14 ~~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~ 93 (186)
T 2poy_A 14 LYFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRG 93 (186)
T ss_dssp ----CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTS
T ss_pred cccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCC
Confidence 45677999999999999999999999999999999999999999877666666778899999999999999999999766
Q ss_pred CCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCC
Q psy793 85 NGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHP 164 (414)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~ 164 (414)
++ +++.|+||..|++|.+.++|..+|+|+||+.+ |
T Consensus 94 ~G--------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~g-p 128 (186)
T 2poy_A 94 DG--------------------------------------------TGGESIYGSKFRDENFVYTHDAPFLLSMANAG-P 128 (186)
T ss_dssp SS--------------------------------------------SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSS-T
T ss_pred CC--------------------------------------------CCCCccCCCcccCcccccccCCCcEEEEeeCC-C
Confidence 65 56677888889999999999989999999999 9
Q ss_pred CCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCC
Q psy793 165 NTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQ 222 (414)
Q Consensus 165 ~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~ 222 (414)
++++||||||++++|+||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||+
T Consensus 129 ntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 129 NTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSVCITASGV 186 (186)
T ss_dssp TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEC
T ss_pred CCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEeCCC
Confidence 9999999999999999999999999999999999999999998899999999999984
No 7
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.4e-51 Score=349.67 Aligned_cols=169 Identities=59% Similarity=0.955 Sum_probs=155.7
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.||+||||+++++++.|+|+||||++.||+||+||++||++. +.+..++..+|+|+.||||+|+|||||||+..+++
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g-- 78 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNG-- 78 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSS--
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCC--
Confidence 589999999999999999999999999999999999999864 33444566779999999999999999999976655
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCcc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
+++.++||..|++|.+.++|+.+|+||||+.+ |++++
T Consensus 79 ------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~g-p~tng 115 (170)
T 1qng_A 79 ------------------------------------------SGGESIYGRSFTDENFNMKHDQPGLLSMANAG-PNTNS 115 (170)
T ss_dssp ------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TTCBC
T ss_pred ------------------------------------------CCCccccCCcccccccccccCCCCEEEEeecC-CCCcc
Confidence 56678888899999999999999999999999 99999
Q ss_pred chhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCC
Q psy793 169 SQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQL 223 (414)
Q Consensus 169 sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l 223 (414)
||||||++++|+||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||++
T Consensus 116 SQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 116 SQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSVVITDCGEL 170 (170)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC
T ss_pred cEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCeEEEeceeC
Confidence 9999999999999999999999999999999999999988999999999999875
No 8
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=5.4e-51 Score=347.33 Aligned_cols=170 Identities=51% Similarity=0.805 Sum_probs=152.0
Q ss_pred CCcccccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccc-cCCCcceEEeccceeccC
Q psy793 1 MDKSICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSRFHRIIPQFMIQGG 79 (414)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~-y~~~~f~rv~~~~~iq~G 79 (414)
|+-......||+||||+++++|+.|+|+||||++.||+||+||++||++.. +| |+|+.||||+|+||||||
T Consensus 1 ~~~~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~--------g~~Y~g~~FhRvi~~f~iQgG 72 (172)
T 2cmt_A 1 MRTKKQKRNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGER--------GFGYHNCCFHRVIPQFMCQGG 72 (172)
T ss_dssp --------CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCSSTTCBEEEEETTTEEEEC
T ss_pred CCccCCCCCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCC--------CceECCCEEEEEECCCEEEcC
Confidence 344456677999999999999999999999999999999999999998643 35 999999999999999999
Q ss_pred CccccCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeec
Q psy793 80 DITNFNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLA 159 (414)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~ 159 (414)
|+..+++ +++.++||..+++|.+.++|+.+|+||||
T Consensus 73 d~~~~~G--------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmA 108 (172)
T 2cmt_A 73 DFVKGDG--------------------------------------------TGGKSIYGRKFDDENFQLRHEGFGVLSMA 108 (172)
T ss_dssp CTTTSSS--------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEEC
T ss_pred CccCCCC--------------------------------------------CCCCccCCCcccccccCcccCCceEEEEe
Confidence 9976655 56677888889999999999999999999
Q ss_pred cCCCCCCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCC
Q psy793 160 NTGHPNTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQL 223 (414)
Q Consensus 160 ~~~~~~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l 223 (414)
+++ |++++||||||++++|+||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||++
T Consensus 109 ~~g-p~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l 171 (172)
T 2cmt_A 109 NSG-PNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGEL 171 (172)
T ss_dssp CSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEEEEEE
T ss_pred eCC-CCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEEeEeE
Confidence 999 999999999999999999999999999999999999999999988999999999999976
No 9
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=5.3e-51 Score=349.44 Aligned_cols=172 Identities=53% Similarity=0.870 Sum_probs=157.5
Q ss_pred cccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCcccc
Q psy793 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNF 84 (414)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~ 84 (414)
.....||+||||+++++|+.|+|+||||++.||+||+||++||+++++. .++..+|+|+.||||+|+|||||||+..+
T Consensus 5 ~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 82 (177)
T 1mzw_A 5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNG 82 (177)
T ss_dssp CCCCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTS
T ss_pred ccCCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccC
Confidence 3456799999999999999999999999999999999999999987743 23556799999999999999999999766
Q ss_pred CCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCC
Q psy793 85 NGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHP 164 (414)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~ 164 (414)
++ +++.++||..|++|.+.++|+.+|+||||+.+ |
T Consensus 83 ~G--------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~g-p 117 (177)
T 1mzw_A 83 DG--------------------------------------------TGVASIYRGPFADENFKLRHSAPGLLSMANSG-P 117 (177)
T ss_dssp SS--------------------------------------------CCCCCTTSSCBCCCCCCSCCCSTTEEEECCSS-T
T ss_pred CC--------------------------------------------CCCCccCCCcccCcccccccCCCCEEEEccCC-C
Confidence 55 56677888899999999999999999999999 9
Q ss_pred CCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhcccc-CCCCccccEEEEcCCCC
Q psy793 165 NTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEA-ENDKPLVTCTITNSGQL 223 (414)
Q Consensus 165 ~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~-~~~~P~~~i~I~~~g~l 223 (414)
++++||||||++++|+||++|+|||+|++||+||++|+.+++ .+++|..+|+|.+||+|
T Consensus 118 ~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 118 STNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 999999999999999999999999999999999999999998 67899999999999875
No 10
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=2e-50 Score=342.26 Aligned_cols=162 Identities=54% Similarity=0.867 Sum_probs=151.4
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccc-cCCCcceEEeccceeccCCccccCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~-y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
.||+||||+++++|+.|+|+||||++.||+||+||++||+|.. +| |+|+.||||+|+|||||||+..+++
T Consensus 2 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~fhRvi~~f~iQgGd~~~~~g- 72 (165)
T 2z6w_A 2 GNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEK--------GFGYKGSTFHRVIPSFMCQAGDFTNHNG- 72 (165)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSSS-
T ss_pred CCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCC--------CccCcCCEEEEEECCCEEEeCCccCCCC-
Confidence 3799999999999999999999999999999999999998643 45 9999999999999999999976555
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCc
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTN 167 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~ 167 (414)
+++.++||..+++|.+.++|..+|+||||+.+ |+++
T Consensus 73 -------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~g-p~s~ 108 (165)
T 2z6w_A 73 -------------------------------------------TGGKSIYGSRFPDENFTLKHVGPGVLSMANAG-PNTN 108 (165)
T ss_dssp -------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TTCB
T ss_pred -------------------------------------------CCCCcccCCcccCcccccccCCCCEEEEeeCC-CCCc
Confidence 56667888889999999999889999999999 9999
Q ss_pred cchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCC
Q psy793 168 NSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQL 223 (414)
Q Consensus 168 ~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l 223 (414)
+||||||++++|+||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||++
T Consensus 109 ~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l 164 (165)
T 2z6w_A 109 GSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 164 (165)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEEC
T ss_pred ccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcEEEEEeEEE
Confidence 99999999999999999999999999999999999999888999999999999986
No 11
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.2e-50 Score=343.25 Aligned_cols=165 Identities=52% Similarity=0.834 Sum_probs=152.2
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccc-cCCCcceEEeccceeccCCccccC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~-y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
...||+||||+++++|+.|+|+||||++.||+||+||++||++.. +| |+|+.||||+|+|||||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (173)
T 2r99_A 8 ARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEK--------GFGFKGSSFHRIIPQFMCQGGDFTNHN 79 (173)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred ccCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccC--------CceecCCEEEEeeCCCEEEeCCcCCCC
Confidence 456899999999999999999999999999999999999998643 34 999999999999999999997665
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ +++.++||..|++|.+.++|+.+|+|+||+.+ |+
T Consensus 80 g--------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~g-p~ 114 (173)
T 2r99_A 80 G--------------------------------------------TGGKSIYGKKFDDENFILKHTGPGLLSMANSG-PN 114 (173)
T ss_dssp S--------------------------------------------SCCCBTTBSCBCCCCCCSCCCSSSEEEECCSS-TT
T ss_pred C--------------------------------------------CCCCccCCCcccCcccCcccCCCcEEEEccCC-CC
Confidence 5 56677888889999999999999999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQLS 224 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l~ 224 (414)
+++||||||++++|+||++|+|||+|++||+||++|+.+++.+++|..+|+|.+||++.
T Consensus 115 t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 115 TNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGEYV 173 (173)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEECC
T ss_pred CcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCeEEEEeeeEC
Confidence 99999999999999999999999999999999999999999889999999999999863
No 12
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.1e-50 Score=341.42 Aligned_cols=163 Identities=52% Similarity=0.837 Sum_probs=152.0
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.||+||||+.+++|+.|+|+||||++.||+||+||++||+|+.+.+ |+|+.||||+|+|||||||+...++
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g-- 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFG-------YKDSIFHRVIPQFMLQGGDFTRHNG-- 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBEEEEETTTEEEECCTTTSSS--
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCc-------ccCCEEEEEECCCeEEeCCCCCCCC--
Confidence 4899999999999999999999999999999999999998754322 9999999999999999999765555
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCcc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
.++.++||..+++|.+.++|+.+|+|+|||.+ |++++
T Consensus 72 ------------------------------------------~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g-~~t~~ 108 (164)
T 3pmp_A 72 ------------------------------------------TGGKSIYGEKFADENFQVKHTKPGLLSMANAG-ANTNG 108 (164)
T ss_dssp ------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSS-TTCBC
T ss_pred ------------------------------------------CCCcccCCccccccccccCcCCCcEEEEeeCC-CCCcc
Confidence 66778889999999999999999999999999 99999
Q ss_pred chhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCC
Q psy793 169 SQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQL 223 (414)
Q Consensus 169 sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l 223 (414)
||||||++++|+||++|+|||+|++||+||++|+++++.+++|..+|+|.+||+|
T Consensus 109 SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v~I~~cg~l 163 (164)
T 3pmp_A 109 SQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATIKITDCGTV 163 (164)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC
T ss_pred cEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCEEEEeCeEE
Confidence 9999999999999999999999999999999999999988999999999999986
No 13
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=9.1e-50 Score=338.93 Aligned_cols=163 Identities=53% Similarity=0.861 Sum_probs=150.1
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccc-cCCCcceEEeccceeccCCccccC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~-y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
...+++||||+++++|+.|+|+||||++.||+||+||++||+|.. +| |+|+.||||+|+|||||||+..++
T Consensus 8 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 8 PEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEH--------GFGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCC--------CcccCCCEEEEEECCCEEecCCccCCC
Confidence 356899999999999999999999999999999999999998744 45 999999999999999999976555
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ +++.|+||..+++|++.++|. +|+||||+.+ |+
T Consensus 80 g--------------------------------------------~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~g-p~ 113 (172)
T 2haq_A 80 G--------------------------------------------TGGKSIYGEKFADENLNVKHF-VGALSMANAG-PN 113 (172)
T ss_dssp S--------------------------------------------SCCCCSSSSCBCCCCCCSCCC-TTEEEECCSS-TT
T ss_pred C--------------------------------------------CCCccccCCcccCcCCCcccC-ceEEEEccCC-CC
Confidence 5 566788898999999999998 9999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQL 223 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l 223 (414)
+++||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+||+|
T Consensus 114 tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 114 TNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 999999999999999999999999999999999999999985 4599999999999875
No 14
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=342.73 Aligned_cols=167 Identities=55% Similarity=0.835 Sum_probs=153.5
Q ss_pred ccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccC
Q psy793 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
....||+||||+++++++.|+|+||||++.||+||+||++||++++|.+ |+|+.||||+|+|||||||+..++
T Consensus 18 ~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~ 90 (184)
T 3rdd_A 18 QGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHN 90 (184)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-------cCCCEEEEccCCcEEEeCCCCCCC
Confidence 3456899999999999999999999999999999999999998866443 999999999999999999987655
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ .++.++||..+++|.+.++|+.+|+|+||+.+ |+
T Consensus 91 g--------------------------------------------~gg~si~g~~~~de~~~l~h~~~G~lsmA~~g-p~ 125 (184)
T 3rdd_A 91 G--------------------------------------------TGGKSIYGEKFEDENFILKHTGPGILSMANAG-PN 125 (184)
T ss_dssp S--------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TT
T ss_pred C--------------------------------------------CCCcccCCCcccCcccccccCCCcEEEEEeCC-CC
Confidence 5 56677888999999999999999999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEcCCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITNSGQLS 224 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~~g~l~ 224 (414)
+++||||||++++|+||++|+|||+|++||+||++|+++++.+++|..+|+|.+||+|.
T Consensus 126 s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 126 TNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE 184 (184)
T ss_dssp CBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEECC
T ss_pred CcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCeEEEeCeEEC
Confidence 99999999999999999999999999999999999999999889999999999999873
No 15
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.3e-49 Score=351.16 Aligned_cols=171 Identities=47% Similarity=0.842 Sum_probs=157.2
Q ss_pred ccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccC
Q psy793 6 CKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFN 85 (414)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~ 85 (414)
....||+||||+++++|+.|+|+||||++.||+||+||++||+++++.+ ++..||+|+.||||+|+|||||||+..++
T Consensus 55 ~~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~--g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~ 132 (229)
T 1z81_A 55 TNPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN--NLPVGYKNTIFHRVIKEFMIQGGDFINHN 132 (229)
T ss_dssp SSTTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS--SSBCSSTTEECCEEETTTEEEECCTTTSS
T ss_pred cCCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc--CCCceECCCEEEEEeCCCEEEcCCCcCCC
Confidence 4557999999999999999999999999999999999999999887543 35568999999999999999999997666
Q ss_pred CCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCC
Q psy793 86 GTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~ 165 (414)
+ +++.++||..|++|.+.++|+++|+|+|||.+ |+
T Consensus 133 G--------------------------------------------~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~g-pn 167 (229)
T 1z81_A 133 G--------------------------------------------SGSLSIYGEKFDDENFDIKHDKEGLLSMANSG-PN 167 (229)
T ss_dssp S--------------------------------------------CCCCBTTBSCCCCCCCCSCCCSTTEEEECCSS-SS
T ss_pred C--------------------------------------------CCCCccCCCcccccccccccCCCcEEEeccCC-CC
Confidence 6 56678888899999999999999999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEE--echHHHHHHhccccCC--CCccccEEEEcCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVR--QGFGVAREVSYVEAEN--DKPLVTCTITNSGQL 223 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~--~G~~vv~~i~~~~~~~--~~P~~~i~I~~~g~l 223 (414)
+++||||||++++|+||++|+|||+|+ +||+||++|+.+++.. ++|..+|+|.+||++
T Consensus 168 tngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 168 TNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp CCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred CcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 999999999999999999999999999 9999999999999854 899999999999875
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=4e-49 Score=341.69 Aligned_cols=168 Identities=51% Similarity=0.813 Sum_probs=154.1
Q ss_pred cccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCcccc
Q psy793 5 ICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNF 84 (414)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~ 84 (414)
.....||+||||+++++|+.|+|+||||++.||+||+||++||+++.+.+ |+|+.||||+|+|||||||+...
T Consensus 22 ~~~~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~ 94 (193)
T 3k2c_A 22 MAKEASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAH 94 (193)
T ss_dssp CC--CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSS-------STTCBEEEEETTTEEEECCTTTS
T ss_pred ccccCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCc-------ccCCEEEEEeCCCEEEeCCCCCC
Confidence 34567999999999999999999999999999999999999998755332 99999999999999999997665
Q ss_pred CCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCC
Q psy793 85 NGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHP 164 (414)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~ 164 (414)
++ .++.++||..+++|.+.++|+.+|+|+||+.+ |
T Consensus 95 ~g--------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~g-p 129 (193)
T 3k2c_A 95 NG--------------------------------------------TGGRSIYGEKFPDENFELKHTKEGILSMANCG-A 129 (193)
T ss_dssp SS--------------------------------------------SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSS-T
T ss_pred CC--------------------------------------------cCCcccCCCcccccccccccCCCcEEEEEeCC-C
Confidence 55 56678888999999999999999999999999 9
Q ss_pred CCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCCCCcc--ccEEEEcCCCCC
Q psy793 165 NTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPL--VTCTITNSGQLS 224 (414)
Q Consensus 165 ~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~--~~i~I~~~g~l~ 224 (414)
++++||||||++++|+||++|+|||+|++||+||++|+++++.+++|. .+|+|.+||+|.
T Consensus 130 ~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 130 HTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEEEEECC
T ss_pred CCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEEceEeC
Confidence 999999999999999999999999999999999999999999889999 999999999986
No 17
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.2e-49 Score=341.84 Aligned_cols=168 Identities=49% Similarity=0.808 Sum_probs=153.2
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccc-cCCCcceEEeccceeccCCccccCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALH-FTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~-y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
.+++||||+++++|+.|+|+||||++.||+||+||++||+|+. +| |+|+.||||+|+|||||||+..+++
T Consensus 14 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~--------g~~Y~g~~FhRvi~~f~iQgGd~~~~~g- 84 (188)
T 3ich_A 14 VTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEK--------GFGYKNSKFHRVIKDFMIQGGDFTRGDG- 84 (188)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTT--------SCSSTTCBCCEEETTTEEEECCTTTSSS-
T ss_pred cCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccC--------CccccCCEEEEEECCCEEEcCCccCCCC-
Confidence 4789999999999999999999999999999999999998644 45 9999999999999999999765555
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCc
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTN 167 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~ 167 (414)
+++.|+||..|++|.+.++|+.+|+|||||.+ |+++
T Consensus 85 -------------------------------------------~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~g-p~tn 120 (188)
T 3ich_A 85 -------------------------------------------TGGKSIYGERFPDENFKLKHYGPGWVSMANAG-KDTN 120 (188)
T ss_dssp -------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TTCB
T ss_pred -------------------------------------------CCCccccCCcccccccCcccCCCeEEEEccCC-CCCc
Confidence 56678889999999999999999999999999 9999
Q ss_pred cchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCCCCCCCc
Q psy793 168 NSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQLSLNEDW 229 (414)
Q Consensus 168 ~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l~~~~~~ 229 (414)
+||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+|+++....|+
T Consensus 121 gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~~~~Pf 183 (188)
T 3ich_A 121 GSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIEVEKPF 183 (188)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEE
T ss_pred ccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEEecCCCC
Confidence 9999999999999999999999999999999999999984 5699999999999998554443
No 18
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.8e-49 Score=341.13 Aligned_cols=173 Identities=50% Similarity=0.816 Sum_probs=157.0
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNG 86 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (414)
...+++||||+++++++.|+|+||||++.||+||+||++||+++.|. +|+|+.||||+|+|||||||+..+++
T Consensus 9 p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g 81 (185)
T 4fru_A 9 PKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF-------GYKDSKFHRVIKDFMIQGGDFTRGDG 81 (185)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------CSTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC-------eEcCCEEEEeeCCCeEEECCCCCCCC
Confidence 34588999999999999999999999999999999999999874321 49999999999999999999976655
Q ss_pred CCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCC
Q psy793 87 TGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNT 166 (414)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~ 166 (414)
.++.++||..+++|++.++|+.+|+|+|||.+ |++
T Consensus 82 --------------------------------------------~gg~si~g~~f~de~~~~~h~~~G~lsma~~g-p~t 116 (185)
T 4fru_A 82 --------------------------------------------TGGKSIYGERFPDENFKLKHYGPGWVSMANAG-KDT 116 (185)
T ss_dssp --------------------------------------------SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSS-TTC
T ss_pred --------------------------------------------CCCccccCCccCccccccCcCCCeEEEEeeCC-CCC
Confidence 56778888999999999999999999999999 999
Q ss_pred ccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCCCCCCCcCc
Q psy793 167 NNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQLSLNEDWGV 231 (414)
Q Consensus 167 ~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l~~~~~~~i 231 (414)
++||||||++++|+||++|+|||+|++||+||++|+++++. +++|..+|+|.+||++....++.+
T Consensus 117 ~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~~~Pf~~ 182 (185)
T 4fru_A 117 NGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIEVEKPFAI 182 (185)
T ss_dssp BCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEEEEEEEEE
T ss_pred cceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEecCCCCcc
Confidence 99999999999999999999999999999999999999984 689999999999999876555543
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.9e-47 Score=340.26 Aligned_cols=178 Identities=29% Similarity=0.445 Sum_probs=148.1
Q ss_pred cccccCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCC---CCCcc----c--c-cCCCcceEEec
Q psy793 3 KSICKEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKG---KLGKA----L--H-FTGSRFHRIIP 72 (414)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~---~~~~~----~--~-y~~~~f~rv~~ 72 (414)
..+....||+||||+.|++|+.|+|+||||++.||+||+||++||+++.... ..++. + | |+|+.||||+|
T Consensus 7 ~~p~~~~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~ 86 (234)
T 2ose_A 7 DLPNSGKNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLH 86 (234)
T ss_dssp SCCCCCSSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEET
T ss_pred ccCcCCCCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEEC
Confidence 4566778999999999999999999999999999999999999999762110 00111 3 6 99999999999
Q ss_pred cceeccCCccccCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCc-----CCCCccc
Q psy793 73 QFMIQGGDITNFNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPC-----FEDENFK 147 (414)
Q Consensus 73 ~~~iq~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~-----~~~e~~~ 147 (414)
+|||||||+..+++++ +.|+||.. |+ ++.
T Consensus 87 ~FmiQgGd~~~g~G~G--------------------------------------------g~siyg~~~~p~~f~--~~~ 120 (234)
T 2ose_A 87 NNYIVSGDIYNSNGSS--------------------------------------------AGTVYCDEPIPPVFG--DYF 120 (234)
T ss_dssp TTEEEECCCC----CC--------------------------------------------CCCTTTTCCBCCCCC--SCC
T ss_pred CCEEEcCCccCCCCCC--------------------------------------------CccccCCccCccccc--CcC
Confidence 9999999976666644 44555554 44 457
Q ss_pred ccccccceeeecc----CCCCCCccchhhhhcCC------CCCCCCcceeeEEEEechHHHHHHhccccCC-CCccccEE
Q psy793 148 LKHKFEGQLSLAN----TGHPNTNNSQFFITLAP------CPHLDGKNVVFGCVRQGFGVAREVSYVEAEN-DKPLVTCT 216 (414)
Q Consensus 148 ~~~~~~g~l~~~~----~~~~~~~~sqf~it~~~------~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~-~~P~~~i~ 216 (414)
++|+++|+||||| .+ |++++||||||+++ +|||||+|+|||+|++||+||++|+.+++.. ++|..+|+
T Consensus 121 l~h~~~G~lsMAn~~~~~g-pntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V~ 199 (234)
T 2ose_A 121 YPHESKGLLSLVPYTDESG-NRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTFS 199 (234)
T ss_dssp CCSCSTTEEEECCEECTTS-CEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCEE
T ss_pred ccCCCCCEEEEecccccCC-CCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCEE
Confidence 8998999999999 78 99999999999999 9999999999999999999999999999854 89999999
Q ss_pred EEcCCCCCCCC
Q psy793 217 ITNSGQLSLNE 227 (414)
Q Consensus 217 I~~~g~l~~~~ 227 (414)
|.+|+++..+.
T Consensus 200 I~~~~~l~~p~ 210 (234)
T 2ose_A 200 IGKCGAYLDSS 210 (234)
T ss_dssp EEEEEECCCHH
T ss_pred EEEEEEecCCc
Confidence 99999987653
No 20
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=6.9e-48 Score=328.54 Aligned_cols=160 Identities=54% Similarity=0.855 Sum_probs=120.0
Q ss_pred EEEEEEeeC--C---eeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCC
Q psy793 12 IVFLDVSIG--E---EKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNG 86 (414)
Q Consensus 12 ~~~~~~~~~--~---~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (414)
+||||++++ + |+.|+|+||||++.||+||+||++||+|..+.+ |+|+.||||+|+|||||||+..+++
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g 76 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEG-------YRESTFHRIIPNFMIQGGDFTRGNG 76 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTS-------STTCBCCEEETTTEEEECC------
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcc-------cCCCEEEEEeCCCEEEeCCcCCCCC
Confidence 799999998 5 556999999999999999999999998754322 9999999999999999999654555
Q ss_pred CCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCC
Q psy793 87 TGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNT 166 (414)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~ 166 (414)
+++.|+||..+++|.+.++|+.+|+|+|||.+ |++
T Consensus 77 --------------------------------------------~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~g-p~t 111 (172)
T 2c3b_A 77 --------------------------------------------TGGRSIYGDKFADENFSRKHDKKGILSMANAG-PNT 111 (172)
T ss_dssp ------------------------------------------------------------CHHHHHTCEEEEC-------
T ss_pred --------------------------------------------CCCcccCCCcccCcccccccCCCeEEEEeeCC-CCC
Confidence 56778888899999989999999999999998 999
Q ss_pred ccchhhhhcCCCCCCCCcceeeEEEEe--chHHHHHHhccccCCC--CccccEEEEcCCCC
Q psy793 167 NNSQFFITLAPCPHLDGKNVVFGCVRQ--GFGVAREVSYVEAEND--KPLVTCTITNSGQL 223 (414)
Q Consensus 167 ~~sqf~it~~~~p~ld~~~~vfG~V~~--G~~vv~~i~~~~~~~~--~P~~~i~I~~~g~l 223 (414)
++||||||++++|+||++|+|||+|++ ||+||++|+++++..+ +|..+|+|.+||++
T Consensus 112 ~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 112 NGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp ---CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred cccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 999999999999999999999999999 9999999999998655 99999999999875
No 21
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.5e-45 Score=311.33 Aligned_cols=151 Identities=45% Similarity=0.674 Sum_probs=136.9
Q ss_pred CeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCCCccccCCCCCCC
Q psy793 21 EEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDE 100 (414)
Q Consensus 21 ~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~~ 100 (414)
+|+.|+|+||||++.||+||+||++||++++ |+|+.||||+|+|||||||+. +++
T Consensus 6 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~----------Y~g~~fhRvi~~f~iQgGd~~-~~g-------------- 60 (161)
T 2ok3_A 6 HTDVGDIKIEVFCERTPKTCENFLALCASNY----------YNGCIFHRNIKGFMVQTGDPT-GTG-------------- 60 (161)
T ss_dssp EETTEEEEEEECTTTCHHHHHHHHHHHHTTT----------TTTCBCCEEETTTEEEECCTT-SSS--------------
T ss_pred EeCCccEEEEEcCCCCcHHHHHHHHHhhhcc----------cCCCEEEEEECCCEEecCCCC-CCC--------------
Confidence 4677999999999999999999999997654 999999999999999999986 334
Q ss_pred cccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcc-cccccccceeeeccCCCCCCccchhhhhcCCCC
Q psy793 101 NFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENF-KLKHKFEGQLSLANTGHPNTNNSQFFITLAPCP 179 (414)
Q Consensus 101 ~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~-~~~~~~~g~l~~~~~~~~~~~~sqf~it~~~~p 179 (414)
.++.++||..+++|.. .++|+++|+||||+.+ |++++||||||++++|
T Consensus 61 ------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsma~~g-p~s~~SQFfI~~~~~~ 109 (161)
T 2ok3_A 61 ------------------------------RGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNG-PNTNGSQFFITYGKQP 109 (161)
T ss_dssp ------------------------------SCCCCTTSSCBCCCCCTTCCSCSTTEEEECCSS-TTCBCSCEEEESSCCG
T ss_pred ------------------------------CCCCcccCCccccccCcCcCcCCCeEEEEecCC-CCCcceEEEEEcCCCC
Confidence 5667888889999974 7889899999999999 9999999999999999
Q ss_pred CCCCcceeeEEEEechHHHHHHhccccCC--CCccccEEEEcCCCCCCCC
Q psy793 180 HLDGKNVVFGCVRQGFGVAREVSYVEAEN--DKPLVTCTITNSGQLSLNE 227 (414)
Q Consensus 180 ~ld~~~~vfG~V~~G~~vv~~i~~~~~~~--~~P~~~i~I~~~g~l~~~~ 227 (414)
+||++|+|||+|++||++|++|+++++.. ++|..+|+|.+|.++..++
T Consensus 110 ~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~~Pf 159 (161)
T 2ok3_A 110 HLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPF 159 (161)
T ss_dssp GGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEECCSC
T ss_pred ccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEecCCC
Confidence 99999999999999999999999999854 7999999999999887553
No 22
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.5e-45 Score=310.97 Aligned_cols=154 Identities=47% Similarity=0.744 Sum_probs=139.5
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.++.|.|+++. |+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 10 ~~~~v~l~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g-- 71 (166)
T 2x7k_A 10 QPPNVYLETSM-----GIIVLELYWKHAPKTCKNFAELARRG----------YYNGTKFHRIIKDFMIQGGDPT-GTG-- 71 (166)
T ss_dssp CCSEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEECCTT-SSS--
T ss_pred CCCEEEEEeCC-----CcEEEEEccCCCCHHHHHHHHHHhcC----------CCCCCEEEEEECCCEEEcCCCC-CCC--
Confidence 57889998765 99999999999999999999999654 5999999999999999999986 334
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCc-ccccccccceeeeccCCCCCCc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDEN-FKLKHKFEGQLSLANTGHPNTN 167 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~ 167 (414)
.++.++||..+++|. ..++|.++|+||||+.+ |+++
T Consensus 72 ------------------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~g-p~s~ 108 (166)
T 2x7k_A 72 ------------------------------------------RGGASIYGKQFEDELHPDLKFTGAGILAMANAG-PDTN 108 (166)
T ss_dssp ------------------------------------------SCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSS-TTCB
T ss_pred ------------------------------------------CCCCccCCCccccccccccCCCCCeEEEEeeCC-CCCc
Confidence 566788888999997 58899889999999999 9999
Q ss_pred cchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCC
Q psy793 168 NSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQL 223 (414)
Q Consensus 168 ~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l 223 (414)
+||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+|.++
T Consensus 109 gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 109 GSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPS 165 (166)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEEC
T ss_pred cceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEe
Confidence 9999999999999999999999999999999999999984 4799999999988654
No 23
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=3.5e-45 Score=314.83 Aligned_cols=152 Identities=39% Similarity=0.601 Sum_probs=137.3
Q ss_pred eeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCCCccccCCCCCCCc
Q psy793 22 EKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDEN 101 (414)
Q Consensus 22 ~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~~~ 101 (414)
|+.|+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+. +++
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g--------------- 76 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSASG----------YYKNTIFHKNIKGFIIQGGDPT-GTG--------------- 76 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTEEEEEECTTSEEEEEETT-SSS---------------
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhccC----------CCCCCEEEEEECCCEEEcCCCC-CCC---------------
Confidence 66799999999999999999999999655 4999999999999999999986 344
Q ss_pred ccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCc-ccccccccceeeeccCCC---CCCccchhhhhcCC
Q psy793 102 FKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDEN-FKLKHKFEGQLSLANTGH---PNTNNSQFFITLAP 177 (414)
Q Consensus 102 ~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~-~~~~~~~~g~l~~~~~~~---~~~~~sqf~it~~~ 177 (414)
.++.++||..+++|. +.++|+.+|+|||||.+. |++++||||||+++
T Consensus 77 -----------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~ 127 (185)
T 2poe_A 77 -----------------------------KGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSS 127 (185)
T ss_dssp -----------------------------SCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSC
T ss_pred -----------------------------CCCCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCC
Confidence 566788899999997 788999999999999986 99999999999999
Q ss_pred CCCCCCcceeeEEEEechHHHHHHhcccc-CCCCccccEEEEcCCCCCCCCC
Q psy793 178 CPHLDGKNVVFGCVRQGFGVAREVSYVEA-ENDKPLVTCTITNSGQLSLNED 228 (414)
Q Consensus 178 ~p~ld~~~~vfG~V~~G~~vv~~i~~~~~-~~~~P~~~i~I~~~g~l~~~~~ 228 (414)
+|+||++|+|||+|++||+||++|+.+++ ..++|..+|+|.+|+++..+++
T Consensus 128 ~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~dPf~ 179 (185)
T 2poe_A 128 LPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHSNPIA 179 (185)
T ss_dssp CGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEECCC--
T ss_pred CCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEECCCCC
Confidence 99999999999999999999999999998 4589999999999999875543
No 24
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=4.5e-45 Score=315.86 Aligned_cols=158 Identities=42% Similarity=0.686 Sum_probs=140.0
Q ss_pred CCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCC
Q psy793 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
..++.|+|++.. |+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 36 ~~~~~V~l~T~~-----G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRVi~~f~iQgGd~~-~~g- 98 (196)
T 2b71_A 36 TERGYITIYTNL-----GDFEVELYWYHSPKTCLNFYTLCEMG----------FYDNTIFHRVIPNFVIQGGDPT-GTG- 98 (196)
T ss_dssp HHSCEEEEEETT-----EEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEEEETT-SSS-
T ss_pred CCCcEEEEEeCC-----CCEEEEEeCCCCcHHHHHHHHHhhcC----------CcCCCEEEEEeCCcEEEcCCCC-CCC-
Confidence 456788887665 99999999999999999999999654 5999999999999999999986 334
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCc-ccccccccceeeeccCCCCCC
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDEN-FKLKHKFEGQLSLANTGHPNT 166 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~-~~~~~~~~g~l~~~~~~~~~~ 166 (414)
.++.++||..+++|. ..++|+.+|+|+||+.+ |++
T Consensus 99 -------------------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~g-pns 134 (196)
T 2b71_A 99 -------------------------------------------KGGKSIYGEYFEDEINKELKHTGAGILSMSNNG-PNT 134 (196)
T ss_dssp -------------------------------------------SCCCBTTBSCBCCCCCTTCCCCSTTEEEECCSS-TTC
T ss_pred -------------------------------------------CCCCccCCCcccccccCCcCcCCCeEEEEccCC-CCC
Confidence 567788888999994 67899899999999999 999
Q ss_pred ccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhcccc-CCCCccccEEEEcCCCCCCC
Q psy793 167 NNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEA-ENDKPLVTCTITNSGQLSLN 226 (414)
Q Consensus 167 ~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~-~~~~P~~~i~I~~~g~l~~~ 226 (414)
++||||||++++|+||++|+|||+|++||+||++|+.+++ ..++|..+|+|.+|.++..+
T Consensus 135 ~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~dP 195 (196)
T 2b71_A 135 NSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAVNA 195 (196)
T ss_dssp BSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC----
T ss_pred cccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEecCC
Confidence 9999999999999999999999999999999999999998 45899999999999987643
No 25
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=8.9e-45 Score=305.66 Aligned_cols=152 Identities=43% Similarity=0.645 Sum_probs=136.2
Q ss_pred CcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCCC
Q psy793 10 NYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTGG 89 (414)
Q Consensus 10 ~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~ 89 (414)
.+.|.|++. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 5 ~~~v~~~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~fhRvi~~f~iQgGd~~-~~g--- 65 (160)
T 2fu0_A 5 PKSAIIYTT-----MGDIHISLFYKECKKTVQNFSVHSING----------YYNNCIFHRVIKHFMVQTGDPS-GDG--- 65 (160)
T ss_dssp CCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSS---
T ss_pred CCEEEEEec-----CccEEEEEeCCCChHHHHHHHHHhccC----------ccCCCEEEEEECCCEEEeCCcC-CCC---
Confidence 456666554 599999999999999999999999654 5999999999999999999985 334
Q ss_pred ccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcc-cccccccceeeeccCCCCCCcc
Q psy793 90 ESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENF-KLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~-~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
.++.++||..+++|.. .++|+.+|+|+||+.+ |++++
T Consensus 66 -----------------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g-p~s~~ 103 (160)
T 2fu0_A 66 -----------------------------------------TGGESIWGNEFEDEFFDHLNHSKPFMVSMANCG-PNTNG 103 (160)
T ss_dssp -----------------------------------------SCCCCTTSSCBCCCCBTTBCSSSSSEEEECCSS-TTCBC
T ss_pred -----------------------------------------CCCCcccCCCccccccCCcccCCceEEEEecCC-CCCcc
Confidence 5667888999999987 6899889999999999 99999
Q ss_pred chhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCC
Q psy793 169 SQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQ 222 (414)
Q Consensus 169 sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~ 222 (414)
||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.++.+
T Consensus 104 SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v 158 (160)
T 2fu0_A 104 SQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKI 158 (160)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEE
T ss_pred cEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEE
Confidence 999999999999999999999999999999999999984 689999999988754
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=8.8e-45 Score=313.89 Aligned_cols=158 Identities=43% Similarity=0.671 Sum_probs=140.9
Q ss_pred CCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCC
Q psy793 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
..+.+|.|++. .|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 17 ~~~~~v~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Ydg~~FhRVi~~f~iQgGd~~-~~g- 79 (197)
T 1zkc_A 17 RGSGYVRLHTN-----KGDLNLELHCDLTPKTCENFIRLCKKH----------YYDGTIFHRSIRNFVIQGGDPT-GTG- 79 (197)
T ss_dssp CSCEEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEEEEEEETTTEEEECCTT-SSS-
T ss_pred CCCcEEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCCEEEcCCCC-CCC-
Confidence 34556777655 499999999999999999999999654 5999999999999999999986 334
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCC-cccccccccceeeeccCCCCCC
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDE-NFKLKHKFEGQLSLANTGHPNT 166 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e-~~~~~~~~~g~l~~~~~~~~~~ 166 (414)
.++.++||..|++| ...++|+.+|+|+||+.+ |++
T Consensus 80 -------------------------------------------~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~g-p~s 115 (197)
T 1zkc_A 80 -------------------------------------------TGGESYWGKPFKDEFRPNLSHTGRGILSMANSG-PNS 115 (197)
T ss_dssp -------------------------------------------SCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSS-TTC
T ss_pred -------------------------------------------CCCCccCCCccccccCcCcCCCCceEEEEecCC-CCC
Confidence 56778889999999 478899999999999999 999
Q ss_pred ccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccCC--CCccccEEEEcCCCCCCC
Q psy793 167 NNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAEN--DKPLVTCTITNSGQLSLN 226 (414)
Q Consensus 167 ~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~--~~P~~~i~I~~~g~l~~~ 226 (414)
++||||||++++|+||++|+|||+|++||+||++|+.+++.. ++|..+|+|.+|+++..+
T Consensus 116 ngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~dP 177 (197)
T 1zkc_A 116 NRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDP 177 (197)
T ss_dssp BCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEECT
T ss_pred cccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEcCC
Confidence 999999999999999999999999999999999999999854 899999999999987644
No 27
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.1e-44 Score=306.42 Aligned_cols=153 Identities=44% Similarity=0.652 Sum_probs=135.8
Q ss_pred CCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCC
Q psy793 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
.....|.+ +|+.|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 19 ~~~~~v~~-----~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g- 81 (176)
T 2a2n_A 19 RVSDSAII-----HTSMGDIHTKLFPVECPKTVENFCVHSRNG----------YYNGHTFHRIIKGFMIQTGDPT-GTG- 81 (176)
T ss_dssp CCCSEEEE-----EETTEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBCCEEETTTEEEECCTT-SSS-
T ss_pred CCCCEEEE-----EecCccEEEEEeCCCChHHHHHHHHHhhcC----------ccCCCEEEEEECCcEEEccCCC-CCC-
Confidence 33445555 455699999999999999999999999654 5999999999999999999985 334
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcc-cccccccceeeeccCCCCCC
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENF-KLKHKFEGQLSLANTGHPNT 166 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~-~~~~~~~g~l~~~~~~~~~~ 166 (414)
.++.++||..+++|.. .++|+.+|+|+||+.+ |++
T Consensus 82 -------------------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g-p~s 117 (176)
T 2a2n_A 82 -------------------------------------------MGGESIWGGEFEDEFHSTLRHDRPYTLSMANAG-SNT 117 (176)
T ss_dssp -------------------------------------------SCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSS-TTC
T ss_pred -------------------------------------------CCCCcccCCccccccccccccCCceEEEEEeCC-CCC
Confidence 5677888999999987 6899889999999999 999
Q ss_pred ccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC--CCCccccEEEEcCC
Q psy793 167 NNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE--NDKPLVTCTITNSG 221 (414)
Q Consensus 167 ~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~--~~~P~~~i~I~~~g 221 (414)
++||||||++++|+||++|+|||+|++||+||++|+.+++. +++|..+|+|.++.
T Consensus 118 ~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~ 174 (176)
T 2a2n_A 118 NGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINIT 174 (176)
T ss_dssp BCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEE
T ss_pred cccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEE
Confidence 99999999999999999999999999999999999999986 78999999998764
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=3.2e-44 Score=311.41 Aligned_cols=159 Identities=45% Similarity=0.703 Sum_probs=143.7
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.++.|+|++.. |+|+||||++.||+||+||++||+. +||+|+.||||+|+|||||||+. .++
T Consensus 10 ~~~~V~l~T~~-----G~I~ieL~~d~aP~tv~NF~~L~~~----------g~Ydg~~FhRVi~~F~iQgGd~~-~~g-- 71 (203)
T 2k7n_A 10 QPPNVYLETSM-----GIIVLELYWKHAPKTCKNFAELARR----------GYYNGTKFHRIIKDFMIQGGDPT-GTG-- 71 (203)
T ss_dssp CCSEEEEEESS-----CEEEEEECTTTCTTHHHHHHHHHHH----------TCGGGCEEEEEETTTEEEEECSS-SSS--
T ss_pred CCCEEEEEeCC-----CcEEEEEccCCCcHHHHHHHHHHhc----------CccCCCEEEEEeCCcEEEcCCCC-CCC--
Confidence 57899998766 9999999999999999999999965 45999999999999999999986 333
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCc-ccccccccceeeeccCCCCCCc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDEN-FKLKHKFEGQLSLANTGHPNTN 167 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~ 167 (414)
.++.++||..|++|. ..++|.++|+|+||+.+ |+++
T Consensus 72 ------------------------------------------~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~g-pnsn 108 (203)
T 2k7n_A 72 ------------------------------------------RGGASIYGKQFEDELHPDLKFTGAGILAMANAG-PDTN 108 (203)
T ss_dssp ------------------------------------------SCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESS-TTCE
T ss_pred ------------------------------------------CCCCccCCCcccccccccccCCCCeEEEEeeCC-CCCc
Confidence 566788888999997 58899889999999999 9999
Q ss_pred cchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhcccc-CCCCccccEEEEcCCCCCCCCC
Q psy793 168 NSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEA-ENDKPLVTCTITNSGQLSLNED 228 (414)
Q Consensus 168 ~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~-~~~~P~~~i~I~~~g~l~~~~~ 228 (414)
+||||||++++|+||++|+|||+|++||+||++|+.+++ ..++|..+|+|.+|+++.....
T Consensus 109 gSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~~~s 170 (203)
T 2k7n_A 109 GSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGGGGS 170 (203)
T ss_dssp EEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCCCCC
T ss_pred ccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEecCCC
Confidence 999999999999999999999999999999999999998 4579999999999998876644
No 29
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.2e-44 Score=309.71 Aligned_cols=162 Identities=36% Similarity=0.523 Sum_probs=140.1
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCC--C---CcccccCCCcceEEeccceeccCCc
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGK--L---GKALHFTGSRFHRIIPQFMIQGGDI 81 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~--~---~~~~~y~~~~f~rv~~~~~iq~G~~ 81 (414)
...++.|.|++.. |+|+||||++.||+||+||++||+|..+.+. . .+.+||+|+.||||+|+|||||||+
T Consensus 20 ~~~~~~v~l~t~~-----G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 20 PLATATATLHTNR-----GDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp -CCSEEEEEEETT-----EEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT
T ss_pred CCCCeEEEEEecc-----eeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCC
Confidence 3446777776554 9999999999999999999999998876431 1 1458999999999999999999998
Q ss_pred cccCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCC-cccccccccceeeecc
Q psy793 82 TNFNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDE-NFKLKHKFEGQLSLAN 160 (414)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e-~~~~~~~~~g~l~~~~ 160 (414)
. +++ +++ ||..|++| .+.++|+.+|+|+|||
T Consensus 95 ~-g~G--------------------------------------------~gg---~g~~f~dE~~~~l~h~~~G~lsMAn 126 (191)
T 1w74_A 95 T-GTG--------------------------------------------RGG---PGYKFADEFHPELQFDKPYLLAMAN 126 (191)
T ss_dssp T-SSS--------------------------------------------SCC---SSCCBCCCCCTTCCSCSSSEEEECC
T ss_pred C-CCC--------------------------------------------CCC---CCCccccccccCCCcCCCcEEEEee
Confidence 4 233 233 57788999 4789999999999999
Q ss_pred CCCCCCccchhhhhcCCCCCCCCcceeeEEEEe--chHHHHHHhcccc-CCCCccccEEEEcCCC
Q psy793 161 TGHPNTNNSQFFITLAPCPHLDGKNVVFGCVRQ--GFGVAREVSYVEA-ENDKPLVTCTITNSGQ 222 (414)
Q Consensus 161 ~~~~~~~~sqf~it~~~~p~ld~~~~vfG~V~~--G~~vv~~i~~~~~-~~~~P~~~i~I~~~g~ 222 (414)
.+ |++++||||||++++|+||++|+|||+|++ ||+||++|+.+++ ..++|..+|+|.+|++
T Consensus 127 ~g-pntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i 190 (191)
T 1w74_A 127 AG-PGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITI 190 (191)
T ss_dssp SS-TTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEEEE
T ss_pred CC-CCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEEEE
Confidence 99 999999999999999999999999999999 9999999999998 4689999999999875
No 30
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=3e-44 Score=313.87 Aligned_cols=159 Identities=34% Similarity=0.526 Sum_probs=135.9
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccC-----Cccc
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGG-----DITN 83 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G-----~~~~ 83 (414)
.+.+|.|+++ .|+|+|+||++.||+||+||++||+.+ ||+|+.||||+|+|||||| ||.
T Consensus 5 ~~~~v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~- 68 (201)
T 3bo7_A 5 KKGYLRIVTT-----QGSLNIELHADMAPRACDSFLRLCAVK----------YFDDTIFHRCIRNFMIQGGRAELRQPS- 68 (201)
T ss_dssp CCEEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT----------TTTTCBEEEEETTTEEEECCGGGCCC--
T ss_pred CceEEEEEeC-----CCCEEEEEcCCCCcHHHHHHHHHHhcC----------ccCCCEEEEeeCCCEEEcCcccccCCC-
Confidence 3567777655 499999999999999999999999654 5999999999999999999 876
Q ss_pred cCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCcccccc-------CCcCCCC-cccccccccce
Q psy793 84 FNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIY-------GPCFEDE-NFKLKHKFEGQ 155 (414)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~-------g~~~~~e-~~~~~~~~~g~ 155 (414)
+++. ++.++| |..|++| ...++|+.+|+
T Consensus 69 ~~g~--------------------------------------------gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~ 104 (201)
T 3bo7_A 69 KKKE--------------------------------------------VQQSPRSISGFPGGAPFEDEFDNRLVHQGIGV 104 (201)
T ss_dssp --------------------------------------------------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTE
T ss_pred CCCC--------------------------------------------CCccccccccccCCCcccCcccCCCCcCCCcE
Confidence 4453 444555 7788888 47889989999
Q ss_pred eeeccCCCCCCccchhhhhcCCCCCCCCcceeeEEEEechHHHHHHhccccC-CCCccccEEEEcCCCCCCCCC
Q psy793 156 LSLANTGHPNTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVAREVSYVEAE-NDKPLVTCTITNSGQLSLNED 228 (414)
Q Consensus 156 l~~~~~~~~~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~-~~~P~~~i~I~~~g~l~~~~~ 228 (414)
||||+++ |++++||||||++++|+||++|+|||+|++||+||++|+.+++. .++|..+|+|.+|+++..+++
T Consensus 105 lsmA~~g-p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~v~~dPf~ 177 (201)
T 3bo7_A 105 LSMANDG-KHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFKNPFE 177 (201)
T ss_dssp EEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEEEEEEECCC-
T ss_pred EEEeeCC-CCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEcCCcc
Confidence 9999998 99999999999999999999999999999999999999999984 589999999999999876544
No 31
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.1e-43 Score=301.86 Aligned_cols=154 Identities=31% Similarity=0.472 Sum_probs=133.2
Q ss_pred CCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCC
Q psy793 8 EGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGT 87 (414)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~ 87 (414)
.++++|+|+++. |+|+||||++.||+||+||++||+. +||+|+.||||+|+|||||||+....+
T Consensus 2 ~~~~~v~~~t~~-----G~i~ieL~~~~aP~t~~NF~~L~~~----------g~Y~g~~FhRvi~~f~iQgGd~~~~~~- 65 (166)
T 1v9t_A 2 KGDPHVLLTTSA-----GNIELELDKQKAPVSVQNFVDYVNS----------GFYNNTTFHRVIPGFMIQGGGFTEQMQ- 65 (166)
T ss_dssp CCSCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHHT----------TTTTTCBEEEEETTTEEEESSBCTTCC-
T ss_pred CCCeEEEEEeCC-----ccEEEEEcCCCCcHHHHHHHHHhcc----------CCCCCCEEEEEECCcEEEcCCcCcCCC-
Confidence 568999998654 9999999999999999999999954 459999999999999999999864211
Q ss_pred CCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCc
Q psy793 88 GGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTN 167 (414)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~ 167 (414)
.+.++..+++|.....|+.+|+|||||++.|+++
T Consensus 66 ----------------------------------------------~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~ 99 (166)
T 1v9t_A 66 ----------------------------------------------QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSA 99 (166)
T ss_dssp ----------------------------------------------BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCB
T ss_pred ----------------------------------------------CCCCCCcccccccccccCCceEEEEeecCCCCCc
Confidence 1234667888876555668999999998559999
Q ss_pred cchhhhhcCCCCCCCCc-----ceeeEEEEechHHHHHHhccccCC-----CCccccEEEEcCCCC
Q psy793 168 NSQFFITLAPCPHLDGK-----NVVFGCVRQGFGVAREVSYVEAEN-----DKPLVTCTITNSGQL 223 (414)
Q Consensus 168 ~sqf~it~~~~p~ld~~-----~~vfG~V~~G~~vv~~i~~~~~~~-----~~P~~~i~I~~~g~l 223 (414)
+||||||++++|+||++ |+|||+|++||+||++|+.+++.. ++|..+|+|.+|.++
T Consensus 100 gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 100 TSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp CSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEEEEEC
T ss_pred cceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEEEEEe
Confidence 99999999999999998 999999999999999999999843 789999999998764
No 32
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=303.68 Aligned_cols=159 Identities=36% Similarity=0.596 Sum_probs=140.6
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNG 86 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (414)
...+++|+|+++. |+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+. +++
T Consensus 21 ~~~~~~V~l~T~~-----G~I~ieL~~~~aP~tv~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~-~~g 84 (185)
T 2hq6_A 21 PPTNGKVLLKTTA-----GDIDIELWSKEAPKACRNFIQLCLEA----------YYDNTIFHRVVPGFIVQGGDPT-GTG 84 (185)
T ss_dssp CCCBCEEEEEETT-----EEEEEEEBTTTCHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEECCTT-SSS
T ss_pred CCCCCEEEEEeCC-----ccEEEEEeCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEECCCEEEcCCCC-CCC
Confidence 3457789998865 99999999999999999999999654 4999999999999999999985 334
Q ss_pred CCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcc-cccccccceeeeccCCCCC
Q psy793 87 TGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENF-KLKHKFEGQLSLANTGHPN 165 (414)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~-~~~~~~~g~l~~~~~~~~~ 165 (414)
.++.++||..+++|.. .++|+.+|+|+|||.+ |+
T Consensus 85 --------------------------------------------~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g-~~ 119 (185)
T 2hq6_A 85 --------------------------------------------SGGESIYGAPFKDEFHSRLRFNRRGLVAMANAG-SH 119 (185)
T ss_dssp --------------------------------------------SCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSS-TT
T ss_pred --------------------------------------------CCCCcccCCccccccccCcccCCCeEEEEccCC-CC
Confidence 5667888889999975 6888899999999999 99
Q ss_pred CccchhhhhcCCCCCCCCcceeeEEEEechHHH--HHHhcccc-CCCCccccEEEEcCCCCCCCC
Q psy793 166 TNNSQFFITLAPCPHLDGKNVVFGCVRQGFGVA--REVSYVEA-ENDKPLVTCTITNSGQLSLNE 227 (414)
Q Consensus 166 ~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~vv--~~i~~~~~-~~~~P~~~i~I~~~g~l~~~~ 227 (414)
+++||||||++++|+||++|+|||+|+ |++++ ++|+.+++ .+++|..+|+|.+|+++..++
T Consensus 120 s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~~Pf 183 (185)
T 2hq6_A 120 DNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPF 183 (185)
T ss_dssp CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEECTT
T ss_pred CccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeCCCC
Confidence 999999999999999999999999999 88875 67888887 578999999999999987554
No 33
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.4e-42 Score=306.65 Aligned_cols=162 Identities=31% Similarity=0.513 Sum_probs=140.0
Q ss_pred cCCCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCC
Q psy793 7 KEGNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNG 86 (414)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~ 86 (414)
...++.|+|+++. |+|+||||++.||+||+||++||+++ ||+|+.||||+|+|||||||+. +++
T Consensus 18 p~~~~~V~l~T~~-----G~I~ieL~~d~aP~tv~NF~~L~~~g----------~Ydgt~FhRVi~~FmiQgGdp~-~~G 81 (232)
T 3bkp_A 18 GSTRGKVVLHTSL-----GDLDVELWARECPLACRNFVQLCLEG----------YYVNTIFHRVVKDFIVQGGDPT-GTG 81 (232)
T ss_dssp CSCBCEEEEEETT-----EEEEEEEBTTTCHHHHHHHHHHHHHT----------TTTTCBEEEEETTTEEEECCTT-SSS
T ss_pred CCCCCEEEEEECC-----CcEEEEEcCCCCcHHHHHHHHHhhcC----------ccCCCEEEEEeCCCEEEcCCCC-CCC
Confidence 3456789998765 99999999999999999999999655 4999999999999999999986 344
Q ss_pred CCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCcccccc--CCcCCCCcc-cccccccceeeeccCCC
Q psy793 87 TGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIY--GPCFEDENF-KLKHKFEGQLSLANTGH 163 (414)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~--g~~~~~e~~-~~~~~~~g~l~~~~~~~ 163 (414)
+++.++| |..|++|.. .++|+.+|+|+||+.+.
T Consensus 82 --------------------------------------------~Gg~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~ 117 (232)
T 3bkp_A 82 --------------------------------------------RGGADTTFDGKPFDVETHPRLKFRYRGLVGVANLGR 117 (232)
T ss_dssp --------------------------------------------SCCCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC-
T ss_pred --------------------------------------------CCCCccccCCCccCCccccCcCcCCCeEEEEeccCC
Confidence 5566777 888999974 78898999999999994
Q ss_pred C-------------CCccchhhhhcCCCCCCCCcceeeEEEEechHH--HHHHhcccc-CCCCccccEEEEcCCCCCCCC
Q psy793 164 P-------------NTNNSQFFITLAPCPHLDGKNVVFGCVRQGFGV--AREVSYVEA-ENDKPLVTCTITNSGQLSLNE 227 (414)
Q Consensus 164 ~-------------~~~~sqf~it~~~~p~ld~~~~vfG~V~~G~~v--v~~i~~~~~-~~~~P~~~i~I~~~g~l~~~~ 227 (414)
+ ++++||||||++++|+||++|||||+|+ |+++ +++|+.+++ .+++|..+|+|.+|+++..++
T Consensus 118 ~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf 196 (232)
T 3bkp_A 118 SSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPF 196 (232)
T ss_dssp ---------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCC
T ss_pred cccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCCh
Confidence 3 7999999999999999999999999999 7766 889999988 578999999999999987665
Q ss_pred Cc
Q psy793 228 DW 229 (414)
Q Consensus 228 ~~ 229 (414)
+.
T Consensus 197 ~d 198 (232)
T 3bkp_A 197 ED 198 (232)
T ss_dssp TT
T ss_pred hh
Confidence 44
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=1.3e-42 Score=294.60 Aligned_cols=145 Identities=28% Similarity=0.420 Sum_probs=127.4
Q ss_pred CeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCCCccccCCCCCCC
Q psy793 21 EEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDE 100 (414)
Q Consensus 21 ~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~~ 100 (414)
+|+.|+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+..+
T Consensus 5 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~---------------- 58 (164)
T 1lop_A 5 HTNHGDIVIKTFDDKAPETVKNFLDYCREG----------FYNNTIFHRVINGFMIQGGGFEPG---------------- 58 (164)
T ss_dssp EETTEEEEEEECTTTSHHHHHHHHHHHHTT----------TTTTEECCEEETTTEEEESSEETT----------------
T ss_pred EeCCCCEEEEEeCCCCcHHHHHHHHHHhcC----------CCCCCEEEEEeCCceEecCCcccC----------------
Confidence 456699999999999999999999999654 599999999999999999998632
Q ss_pred cccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCccc-ccccccceeeeccCCCCCCccchhhhhcCCCC
Q psy793 101 NFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFK-LKHKFEGQLSLANTGHPNTNNSQFFITLAPCP 179 (414)
Q Consensus 101 ~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~-~~~~~~g~l~~~~~~~~~~~~sqf~it~~~~p 179 (414)
.+.++||..+++|... ++| .+|+|||||++.|++++||||||++++|
T Consensus 59 -------------------------------~g~~~~g~~~~dE~~~~l~~-~~G~lsmA~~~~p~s~gSQFfI~~~~~~ 106 (164)
T 1lop_A 59 -------------------------------MKQKATKEPIKNEANNGLKN-TRGTLAMARTQAPHSATAQFFINVVDND 106 (164)
T ss_dssp -------------------------------TEECCCCCCBCCCCCSSCCC-CTTEEEECCCSSTTCBCSCEEEESSCCG
T ss_pred -------------------------------CCcCCCCCcccccccccccc-CccEEEEeecCCCCCccceEEEEcCCcc
Confidence 1335667889999754 555 7999999986459999999999999999
Q ss_pred CCCCc--------ceeeEEEEechHHHHHHhccccC-----CCCccccEEEEcCCCC
Q psy793 180 HLDGK--------NVVFGCVRQGFGVAREVSYVEAE-----NDKPLVTCTITNSGQL 223 (414)
Q Consensus 180 ~ld~~--------~~vfG~V~~G~~vv~~i~~~~~~-----~~~P~~~i~I~~~g~l 223 (414)
+||++ |+|||+|++||+||++|+.+++. .++|..+|+|.+|+++
T Consensus 107 ~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~v~ 163 (164)
T 1lop_A 107 FLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIESVTVS 163 (164)
T ss_dssp GGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEEEEEC
T ss_pred ccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEEEEEe
Confidence 99998 99999999999999999999985 3799999999998765
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=3e-42 Score=293.87 Aligned_cols=152 Identities=27% Similarity=0.367 Sum_probs=129.4
Q ss_pred CCcEEEEEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccCCccccCCCC
Q psy793 9 GNYIVFLDVSIGEEKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGGDITNFNGTG 88 (414)
Q Consensus 9 ~~~~~~~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G~~~~~~~~~ 88 (414)
.++.|.|+++. |+|+||||++.||+||+||++||+.+ ||+|+.||||+|+|||||||+....
T Consensus 2 p~~~v~l~T~~-----G~i~ieL~~~~aP~t~~NF~~L~~~g----------~Y~g~~FhRvi~~f~iQgGd~~~~~--- 63 (167)
T 3s6m_A 2 PGSMVELHTNH-----GVIKLELDEAKAPKTVENFLNYVKKG----------HYDGTIFHRVINGFMIQGGGFEPGL--- 63 (167)
T ss_dssp CCCEEEEEETT-----EEEEEEECTTTCHHHHHHHHHHHHHT----------TTTTEECCEEETTTEEEESSEETTT---
T ss_pred CCcEEEEEeCC-----ceEEEEEeCCCCcHHHHHHHHHhhhc----------ccCCCEeEEecCCcEEEeccccCCC---
Confidence 46788886554 99999999999999999999999655 4999999999999999999986421
Q ss_pred CccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcccccccccceeeeccCCCCCCcc
Q psy793 89 GESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENFKLKHKFEGQLSLANTGHPNTNN 168 (414)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~g~l~~~~~~~~~~~~ 168 (414)
+.+.++..+++|.....++.+|+|||||.+.|++++
T Consensus 64 --------------------------------------------~~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~g 99 (167)
T 3s6m_A 64 --------------------------------------------KQKPTDAPIANEANNGLKNDTYTIAMARTNDPHSAT 99 (167)
T ss_dssp --------------------------------------------EECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBC
T ss_pred --------------------------------------------CCCCCCCccCCcccccccCCccEEEEecCCCCCCcc
Confidence 123446667777543334489999999964499999
Q ss_pred chhhhhcCCCCCCCCc--------ceeeEEEEechHHHHHHhccccC-----CCCccccEEEEcCCC
Q psy793 169 SQFFITLAPCPHLDGK--------NVVFGCVRQGFGVAREVSYVEAE-----NDKPLVTCTITNSGQ 222 (414)
Q Consensus 169 sqf~it~~~~p~ld~~--------~~vfG~V~~G~~vv~~i~~~~~~-----~~~P~~~i~I~~~g~ 222 (414)
||||||++++|+||++ |+|||+|++||+||++|+++++. +++|..+|+|.++.+
T Consensus 100 SQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~i 166 (167)
T 3s6m_A 100 AQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIEKAVV 166 (167)
T ss_dssp SCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEEEEEE
T ss_pred ceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEEEEEE
Confidence 9999999999999998 99999999999999999999984 479999999998754
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=9.6e-38 Score=292.50 Aligned_cols=177 Identities=20% Similarity=0.252 Sum_probs=138.2
Q ss_pred cccccCCCcEEEEEEeeCC---eeeeeEEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEeccceeccC
Q psy793 3 KSICKEGNYIVFLDVSIGE---EKVGRMVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQFMIQGG 79 (414)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~---~~~G~i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~~~iq~G 79 (414)
..++..++++|.|++.+.+ ++.|+|+|+||++.||+||+||++||+. +||+|+.|||| ++||||||
T Consensus 163 ~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~----------GfYdGt~FHRV-~gFmIQgG 231 (369)
T 3rfy_A 163 NMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVER----------HFYDGMEIQRS-DGFVVQTG 231 (369)
T ss_dssp TSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHT----------TTTTTEECEEE-EEEEECCC
T ss_pred cCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhc----------CCcCCCeeeee-CCeeEecC
Confidence 3456678999999999754 3689999999999999999999999964 45999999999 99999999
Q ss_pred CccccCCCCCccccCCCCCCCcccccccccchhcchhhhHhhcCCCCcCCCCccccccCCcCCCCcc-----cccccccc
Q psy793 80 DITNFNGTGGESIYGPCFEDENFKLKVISQYFHRIIPQFMIQGGDITNFNGTGGESIYGPCFEDENF-----KLKHKFEG 154 (414)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~e~~-----~~~~~~~g 154 (414)
|+.. +++++.... ....+.++.|+... ..+.++|+..+++|.+ .++|+++|
T Consensus 232 Dp~g-~G~G~~~~~--~g~~~~iP~E~~~~---------------------G~g~piyg~~fedegf~~~~~~L~h~~~G 287 (369)
T 3rfy_A 232 DPEG-PAEGFIDPS--TEKTRTVPLEIMVT---------------------GEKTPFYGSTLEELGLYKAQVVIPFNAFG 287 (369)
T ss_dssp CCCC-CCSCCCSCC--CCCCCSSSSSSCSS---------------------SSCCSCCCSSTGGGTEEEEEEEECCCCCC
T ss_pred CCCC-CCCCccCcc--cCcCcccCcccccc---------------------CCCCCcCCCccccccccccccccccCCCc
Confidence 9973 443322110 01112223332100 1245789998988754 78899999
Q ss_pred eeeeccC-CCCCCccchhhhhc-------CCCCCCCCcceeeEEEEechHHHHHHhccccCCCCccccEEEEc
Q psy793 155 QLSLANT-GHPNTNNSQFFITL-------APCPHLDGKNVVFGCVRQGFGVAREVSYVEAENDKPLVTCTITN 219 (414)
Q Consensus 155 ~l~~~~~-~~~~~~~sqf~it~-------~~~p~ld~~~~vfG~V~~G~~vv~~i~~~~~~~~~P~~~i~I~~ 219 (414)
+|+|||+ ..|+|++||||||+ +++|||||+|||||+|++||+||++|++ +..+..++|..
T Consensus 288 ~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD~I~sv~I~~ 355 (369)
T 3rfy_A 288 TMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV-----GDVIESIQVVS 355 (369)
T ss_dssp CCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TCEEEEEEEEE
T ss_pred eEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC-----CCceEEEEEec
Confidence 9999998 24999999999999 4789999999999999999999999988 55667777765
No 37
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.89 E-value=7.9e-23 Score=173.95 Aligned_cols=156 Identities=20% Similarity=0.306 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhcc--CCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQ--SQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAI 334 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~--~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~ 334 (414)
.++..+.+..+++.|+.+++.|+|++|+..|.+|+.+++.... ....++.....+....+|.|+|.||+++++|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 3456678999999999999999999999999999999765432 22334455667888999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy793 335 NLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-QILKEIAFVRKQMRHHLNLEKMTYARMFQN 412 (414)
Q Consensus 335 ~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 412 (414)
.+|+++|+++|+++++|+++|.++..+|++++|+.+|+++++++|++. .+...+..+...+++..+++|+.|++||++
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 162 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQP 162 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC--------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999 889999999999999999999999999974
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.85 E-value=7.1e-21 Score=155.30 Aligned_cols=115 Identities=26% Similarity=0.439 Sum_probs=110.7
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
+.+..++++|+.++++|+|++|+..|++||++ +|....+|.++|.||.++|++++|+.+|+++|
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al 74 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR----------------DPENAILYSNRAACLTKLMEFQRALDDCDTCI 74 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 88889999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 392 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 392 (414)
+++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..++.|+
T Consensus 75 ~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 75 RLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999998764
No 39
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.85 E-value=7e-21 Score=159.48 Aligned_cols=141 Identities=6% Similarity=0.073 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
|-+....+..+++.|+.+++.|+|++|+..|++||++.+...... .....|....+|.|+|.|+.++|+|++|+.+
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~----a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~ 79 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE----AFDHAGFDAFCHAGLAEALAGLRSFDEALHS 79 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS----CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh----hhhhccchHHHHHHHHHHHHHCCCHHHHHHH
Confidence 444566789999999999999999999999999999966532110 1122455677999999999999999999999
Q ss_pred HHHHHhc-------CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 337 CDDILLM-------EPNNVKAL----FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 337 ~~~al~~-------~p~~~~a~----~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
|++||++ +|+++++| |++|.++..+|++++|+.+|+++++++|++..+...+..+...+.++.++
T Consensus 80 ~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 80 ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999 99999999999999999999999999999999999999888887776654
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.81 E-value=9.3e-19 Score=174.27 Aligned_cols=157 Identities=30% Similarity=0.503 Sum_probs=137.1
Q ss_pred CHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHH
Q psy793 256 QLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAIN 335 (414)
Q Consensus 256 ~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~ 335 (414)
..+.....+..++.+|+.++++|+|++|+.+|++|+++.+.... ...+......+....+|+|+|.||+++++|++|+.
T Consensus 260 ~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~ 338 (457)
T 1kt0_A 260 DTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYG-LSEKESKASESFLLAAFLNLAMCYLKLREYTKAVE 338 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCS-CCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccc-CChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 46667788999999999999999999999999999998665432 23455556678889999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy793 336 LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQNG 413 (414)
Q Consensus 336 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~ 413 (414)
+|++||+++|+++++|+++|.+|..+|+|++|+.+|++|++++|++..++..++.++..+++..++++..|++||++.
T Consensus 339 ~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f~k~ 416 (457)
T 1kt0_A 339 CCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKF 416 (457)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999863
No 41
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.80 E-value=2.7e-18 Score=163.99 Aligned_cols=155 Identities=30% Similarity=0.529 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
.+.....+..++.+|+.+++.|+|++|+..|++|+.+.+.... ...+......+....+|.|+|.||+++++|++|+.+
T Consensus 140 ~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 218 (336)
T 1p5q_A 140 SEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESS-FSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIES 218 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCC-CCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcccc-CChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 5566778899999999999999999999999999999654432 233555666788899999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQN 412 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~ 412 (414)
|+++|+++|+++++|+++|.+|..+|++++|+.+|+++++++|++..++..++.++..+++..+.+++.|++||++
T Consensus 219 ~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 219 CNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999974
No 42
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.79 E-value=4.9e-18 Score=149.08 Aligned_cols=159 Identities=26% Similarity=0.394 Sum_probs=127.0
Q ss_pred CCHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHH
Q psy793 255 VQLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAI 334 (414)
Q Consensus 255 ~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~ 334 (414)
++.++..+.+..++..|+.+++.|+|++|+..|.+|+.+.+....................++.++|.||.++++|++|+
T Consensus 29 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 108 (198)
T 2fbn_A 29 YTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAI 108 (198)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 45777888999999999999999999999999999999754322111110111123344689999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy793 335 NLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQNG 413 (414)
Q Consensus 335 ~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~~~ 413 (414)
.+|+++++++|++..+++++|.++..+|++++|+..|+++++++|++..++..++.++..+++..+.++..++++|+..
T Consensus 109 ~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~ 187 (198)
T 2fbn_A 109 DHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDKG 187 (198)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-------------
T ss_pred HHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999853
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.75 E-value=1e-17 Score=136.54 Aligned_cols=115 Identities=22% Similarity=0.341 Sum_probs=103.5
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 339 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~ 339 (414)
..+.+..++++|+.++++|+|++|+.+|++||++ +|....+|.|+|.||+++++|++|+.+|++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~----------------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~ 67 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL----------------DPSNITFYNNKAAVYFEEKKFAECVQFCEK 67 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 4567889999999999999999999999999999 788899999999999999999999999999
Q ss_pred HHhcCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 340 ILLMEPNN-------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 340 al~~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
+|+++|++ +++|+++|.++..++++++|+..|+++++..|+ ++....+..+
T Consensus 68 al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 68 AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 99998866 468999999999999999999999999999985 5555555443
No 44
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.7e-17 Score=134.45 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=111.5
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..++..|+.+++.|+|++|+..|++|+++ .|....+|.++|.||.++++|++|+.+++++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR----------------APEDARGYSNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999 788889999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL------PNDQQILKEIAFVRKQM 395 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~ 395 (414)
++|+++.+|+++|.++..+|++++|+..|+++++++ |++..++..+..+..++
T Consensus 67 ~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred hCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999 99999999998887653
No 45
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.75 E-value=3.3e-18 Score=163.51 Aligned_cols=160 Identities=26% Similarity=0.395 Sum_probs=103.3
Q ss_pred ccCCHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-CcHHHHHhhHHHHHHHHHHHHHHHHHhhCHH
Q psy793 253 ETVQLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-QSKTQQKHFRSYYTAALLNMAAVQLKFKAYK 331 (414)
Q Consensus 253 ~~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~ 331 (414)
..++.++..+.+..++..|+.+++.++|++|+.+|.+|+.+.+..... ...............+|+|+|.||+++++|+
T Consensus 168 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~ 247 (338)
T 2if4_A 168 SDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYD 247 (338)
T ss_dssp TBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 345578888999999999999999999999999999999984322100 0001111112233469999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy793 332 RAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 411 (414)
Q Consensus 332 ~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 411 (414)
+|+.+|+++|+++|++.++|+++|.+|..+|++++|+.+|+++++++|++..++..+..+........+++++.|++||+
T Consensus 248 ~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 248 EAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFK 327 (338)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------------------------
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999999997
Q ss_pred C
Q psy793 412 N 412 (414)
Q Consensus 412 ~ 412 (414)
.
T Consensus 328 ~ 328 (338)
T 2if4_A 328 G 328 (338)
T ss_dssp -
T ss_pred C
Confidence 4
No 46
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.71 E-value=1.9e-16 Score=133.08 Aligned_cols=104 Identities=13% Similarity=0.296 Sum_probs=100.4
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..+++.|+|++|+..|++++.+ +|....+|.++|.||.++|+|++|+.+|+++++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~----------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY----------------DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 3677999999999999999999999999999 888999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 382 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~ 382 (414)
++|+++.+|+++|.||..+|++++|+..|++++++.|+.+
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999875
No 47
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.71 E-value=1.5e-16 Score=135.14 Aligned_cols=123 Identities=17% Similarity=0.208 Sum_probs=111.4
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|+.+++.|+|++|+..|++++++ .|....+|.++|.||+++++|++|+.++++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI----------------APANPIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCcCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999 77888999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH--HHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ--ILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~--~~~~l~~~~~~~~~~~~ 400 (414)
+++|++..+|+++|.++..+|++++|+..|+++++++|++.. ....+..++.++++..+
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~ 133 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANR 133 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999977 55555555555555443
No 48
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.68 E-value=1e-16 Score=134.58 Aligned_cols=115 Identities=9% Similarity=0.017 Sum_probs=99.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
...+...|+.|++.|+|++|+.+|++|+++ +|....+|.++|.||.+++++++|+.++++++++
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 94 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYINV----------------QERDPKAHRFLGLLYELEENTDKAVECYRRSVEL 94 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHh
Confidence 445677899999999999999999999998 7888889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQD-YEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~-~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
+|+++.+|+++|.++..+|++++|+.. +++|++++|+++.+...++.+...
T Consensus 95 ~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~ 146 (150)
T 4ga2_A 95 NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDC 146 (150)
T ss_dssp CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 999999999999999999998877765 589999999999888877777654
No 49
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.68 E-value=6e-16 Score=128.30 Aligned_cols=122 Identities=13% Similarity=0.183 Sum_probs=111.5
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..+++.|+|++|+..|++++.. .|....+|.++|.||.++++|++|+.++++++.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCML----------------DHYDARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3567889999999999999999999999999 888899999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+...+....+
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~ 138 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTA 138 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988777776666666555443
No 50
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.67 E-value=5.3e-16 Score=129.89 Aligned_cols=119 Identities=12% Similarity=0.154 Sum_probs=108.1
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|++++.+ .|....+|+++|.|+..+|+|++|+.+|++++.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCVL----------------DHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHHc----------------CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 4667889999999999999999999999999 888899999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
++|+++.+++++|.++..+|++++|+..|+++++++|+++........+...+..
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 138 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEA 138 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999887665555555544443
No 51
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.67 E-value=1.5e-16 Score=133.60 Aligned_cols=118 Identities=13% Similarity=0.048 Sum_probs=107.7
Q ss_pred hhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHH
Q psy793 270 SGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK 349 (414)
Q Consensus 270 ~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~ 349 (414)
+|..+..+|++++|+..|++++.. .|.....++++|.+|+++|+|++|+.+++++|+++|+++.
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~----------------~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~ 66 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPS----------------PRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPK 66 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCS----------------HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred hHHHHHHcChHHHHHHHHHHhccc----------------CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence 688899999999999999999988 8888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 350 ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 350 a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+|+.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+..+
T Consensus 67 a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~ 120 (150)
T 4ga2_A 67 AHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAK 120 (150)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHH
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHH
Confidence 999999999999999999999999999999999999999999988877654433
No 52
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.66 E-value=5.5e-16 Score=126.78 Aligned_cols=122 Identities=20% Similarity=0.347 Sum_probs=113.3
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+++.|+|++|+..|.+++.+ .|....++.++|.|+..+++|++|+.++++++++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITR----------------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhh----------------CcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 677899999999999999999999999999 7777899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----CHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN-----DQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~-----~~~~~~~l~~~~~~~~~~~~~ 401 (414)
+|+++.+++.+|.++..+|++++|+..|+++++++|+ +..+...+..+........++
T Consensus 73 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~e~ 135 (137)
T 3q49_B 73 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEE 135 (137)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998 788888888887766655544
No 53
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.66 E-value=4.2e-15 Score=131.61 Aligned_cols=119 Identities=16% Similarity=0.150 Sum_probs=111.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHH----------------HHHHHHHh
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLN----------------MAAVQLKF 327 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~n----------------la~~~~~l 327 (414)
+..+..+|..++..|+|++|+..|++++++ +|....+|++ +|.+|.++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~ 67 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIAL----------------NIDRTEMYYWTNVDKNSEISSKLATELALAYKKN 67 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHC
Confidence 566888999999999999999999999999 7888888888 99999999
Q ss_pred hCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q psy793 328 KAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 398 (414)
Q Consensus 328 ~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 398 (414)
|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++.
T Consensus 68 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~ 138 (208)
T 3urz_A 68 RNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQ 138 (208)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998666543
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.62 E-value=2.9e-15 Score=156.43 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=88.8
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
+.+..+.++|+.+.++|++++|+.+|++||++ +|....+|+|+|.+|.++|++++|+.+|++||
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l----------------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al 70 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALEV----------------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAI 70 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34778889999999999999999999999988 55566666666666666666666666666666
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
+++|+++.+|+++|.++..+|++++|++.|++|++++|++..++.+++.++..+++..+.
T Consensus 71 ~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eA 130 (723)
T 4gyw_A 71 RISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEA 130 (723)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 666666666666666666666666666666666666666666666666666666555544
No 55
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.61 E-value=1.2e-14 Score=114.57 Aligned_cols=115 Identities=21% Similarity=0.289 Sum_probs=108.4
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|++++.. .|....++.++|.++..++++++|+..++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 66 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL----------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD 66 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH----------------CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 4677899999999999999999999999998 666788999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
++|++..+++.+|.++..+|++++|+..|+++++++|++..++..++.+..
T Consensus 67 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 67 LKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred hCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999988887753
No 56
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.60 E-value=4.1e-14 Score=119.02 Aligned_cols=127 Identities=17% Similarity=0.303 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
.....+.+..+...|..++..|+|++|+..|.+++.. .|....++.++|.++..+++|++|+.+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~ 69 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL----------------NPSNAIYYGNRSLAYLRTECYGYALGD 69 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHcCCHHHHHHH
Confidence 3456678999999999999999999999999999998 677788999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH--HHHHHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV--RKQMRHHL 399 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~--~~~~~~~~ 399 (414)
++++++++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..+..+ ....++..
T Consensus 70 ~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~ 134 (166)
T 1a17_A 70 ATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFE 134 (166)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988666666 43334433
No 57
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=2.2e-14 Score=115.17 Aligned_cols=122 Identities=25% Similarity=0.362 Sum_probs=114.0
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDD 339 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~ 339 (414)
....+..+...|..++..++|++|+..|.+++.. .|....++.++|.++..++++++|+.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 71 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIEL----------------NPANAVYFCNRAAAYSKLGNYAGAVQDCER 71 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc----------------CCCCHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 4456788999999999999999999999999998 666678999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 340 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 340 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
++.++|++..+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999998877654
No 58
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=4.8e-14 Score=116.23 Aligned_cols=116 Identities=22% Similarity=0.349 Sum_probs=105.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|++++++.+. .+....++.++|.+|..+++|++|+.++++++++
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-------------PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-------------chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 667899999999999999999999999987110 1234789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 392 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 392 (414)
+|++..+++.+|.++..+|++++|+..|+++++++|++..++..+..+.
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 95 DGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp TSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998887764
No 59
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.58 E-value=6.7e-15 Score=118.66 Aligned_cols=101 Identities=14% Similarity=0.129 Sum_probs=91.7
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCC
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPN 346 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~ 346 (414)
+...|..+++.|++++|+..|++|++. .|....+|+++|.++..+|++++|+..++++++++|+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~ 83 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQK----------------EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK 83 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 677899999999999999999999999 8888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 347 NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 347 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
+..+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 84 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 84 DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 9999999999999999999999999999999998754
No 60
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.58 E-value=8e-15 Score=118.51 Aligned_cols=116 Identities=22% Similarity=0.348 Sum_probs=109.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|+++++. .|....++.++|.++..++++++|+.++++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKR----------------NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTT----------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 677999999999999999999999999988 6667889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
+|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998887654
No 61
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.58 E-value=7.8e-15 Score=130.74 Aligned_cols=118 Identities=15% Similarity=0.153 Sum_probs=69.2
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHh-----------hCHHHHHH
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-----------KAYKRAIN 335 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-----------~~~~~A~~ 335 (414)
+...|..+++.|++++|+..|++++++ +|....++.++|.++.++ |++++|+.
T Consensus 42 ~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~ 105 (217)
T 2pl2_A 42 LYWLARTQLKLGLVNPALENGKTLVAR----------------TPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALS 105 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHH
Confidence 334444444444444444444444444 555556666666666666 66666666
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 336 LCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 336 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
.++++++++|+++.+++.+|.++..+|++++|+..|+++++++ ++..++..++.++...++..+.
T Consensus 106 ~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A 170 (217)
T 2pl2_A 106 VLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEA 170 (217)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHH
Confidence 6666666666666666666666666666666666666666666 5666666666666655555444
No 62
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.57 E-value=1.2e-14 Score=151.77 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=115.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+.++|+.|.+.|++++|+..|++||++ +|....+|+|+|.+|.++|++++|+.+|++||++
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l----------------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l 106 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIRI----------------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI 106 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566889999999999999999999999999 8889999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
+|+++.+|+++|.+|..+|++++|++.|++|++++|++..++.+++.++..+++..+.
T Consensus 107 ~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A 164 (723)
T 4gyw_A 107 NPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDY 164 (723)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHH
Confidence 9999999999999999999999999999999999999999999999999887765544
No 63
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.57 E-value=3.4e-14 Score=114.20 Aligned_cols=119 Identities=21% Similarity=0.320 Sum_probs=109.7
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|.+++.. .|....++.++|.++..+++|++|+.++++++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 66 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL----------------DPTNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CCccHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 4677899999999999999999999999998 566778999999999999999999999999999
Q ss_pred cCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q psy793 343 MEPNN-------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 398 (414)
Q Consensus 343 ~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 398 (414)
+.|.+ ..+++++|.++..+|++++|+..|++++++.| +..+...+..+...+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred hccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 98877 89999999999999999999999999999999 688888888887776654
No 64
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.56 E-value=2.1e-14 Score=119.89 Aligned_cols=111 Identities=21% Similarity=0.343 Sum_probs=99.0
Q ss_pred hhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCH----------HHHHHHHHHHHhcC
Q psy793 275 FKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAY----------KRAINLCDDILLME 344 (414)
Q Consensus 275 ~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~----------~~A~~~~~~al~~~ 344 (414)
-+.+.|++|+..|++|+++ .|....+|.|+|.++..++++ ++|+..|++||+++
T Consensus 13 ~r~~~feeA~~~~~~Ai~l----------------~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld 76 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKS----------------NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID 76 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhHHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC
Confidence 3557899999999999999 899999999999999999875 59999999999999
Q ss_pred CCCHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMN-----------NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg-----------~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
|++..+|+++|.+|..+| ++++|+.+|++|++++|++...+..+..+...-.-..+.
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el~~~~ 144 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 144 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhccCcc
Confidence 999999999999999885 899999999999999999999888887776554444333
No 65
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.55 E-value=5.6e-14 Score=125.51 Aligned_cols=122 Identities=17% Similarity=0.182 Sum_probs=108.9
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHH-HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS-YYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~-~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
..+...|..++..|+|++|+..|++++++ .| ....+++++|.|+..+++|++|+.++++++++
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 71 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKL----------------TNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKK 71 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhc----------------cCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHh
Confidence 56899999999999999999999999998 44 55678889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-------QILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~-------~~~~~l~~~~~~~~~~~~~~ 402 (414)
+|++..+++.+|.++..+|++++|+..|+++++++|++. .++..++.+....++..+..
T Consensus 72 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~ 137 (228)
T 4i17_A 72 NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAE 137 (228)
T ss_dssp TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHH
Confidence 999999999999999999999999999999999999999 44666666666655554443
No 66
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.54 E-value=8.5e-14 Score=123.95 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=85.5
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 304 TQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
.......|....++.++|.++..+|++++|+..++++++++ +++.+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 108 ~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 186 (217)
T 2pl2_A 108 KDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPKDLD 186 (217)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChH
Confidence 45556678888999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy793 384 ILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 384 ~~~~l~~~~~~~~~~~~~~ 402 (414)
++..++.++...++..+..
T Consensus 187 ~~~~la~~~~~~g~~~~A~ 205 (217)
T 2pl2_A 187 LRVRYASALLLKGKAEEAA 205 (217)
T ss_dssp HHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHccCHHHHH
Confidence 9999999998888876653
No 67
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.54 E-value=8.9e-14 Score=119.74 Aligned_cols=141 Identities=13% Similarity=0.151 Sum_probs=106.1
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------Cc-------HHHHHhhHHHHHHHHHHHHHHH
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QS-------KTQQKHFRSYYTAALLNMAAVQ 324 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~nla~~~ 324 (414)
.+..+.++|+.++++|+|++|+..|++|+++-+..... .. ........+....++.++|.++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 36678999999999999999999999999983221110 00 1111222233445666666666
Q ss_pred HHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 325 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 325 ~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
...++++.|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++..+..+
T Consensus 84 ~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 162 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK 162 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH
Confidence 6666677777777777777888888999999999999999999999999999999999999999999988887766544
No 68
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.54 E-value=4.9e-14 Score=113.77 Aligned_cols=115 Identities=15% Similarity=0.141 Sum_probs=101.7
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.+...|..++..|+|++|+..|++++...+. .+....+++++|.++.++|+|++|+..+++++..+|
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-------------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p 70 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPN-------------GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYP 70 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-------------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCC
Confidence 4678899999999999999999999987221 122337899999999999999999999999999999
Q ss_pred CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 346 NN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 346 ~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
++ +.+++.+|.++..+|++++|+..|+++++..|++..+...+..+..
T Consensus 71 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 71 THDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 99 8899999999999999999999999999999999888776666544
No 69
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.52 E-value=3.6e-14 Score=137.52 Aligned_cols=120 Identities=10% Similarity=0.054 Sum_probs=74.5
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHH
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA-YKRAINLCDDIL 341 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~-~~~A~~~~~~al 341 (414)
.+..+...|..+.+.|++++|+..|++||.+ +|....+|+++|.++..+++ +++|+.+++++|
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l----------------~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al 159 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIEL----------------NAANYTVWHFRRVLLKSLQKDLHEEMNYITAII 159 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHHh----------------CccCHHHHHHHHHHHHHcccCHHHHHHHHHHHH
Confidence 3556777777777777777777777777777 55555555555555555554 555555555555
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 398 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 398 (414)
+++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+++.
T Consensus 160 ~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~ 216 (382)
T 2h6f_A 160 EEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLW 216 (382)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCC
T ss_pred HHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCCh
Confidence 555555555555555555555555555555555555555555555555555555443
No 70
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.51 E-value=3.7e-13 Score=106.90 Aligned_cols=115 Identities=24% Similarity=0.438 Sum_probs=107.7
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|++++|+..|.+++.. .|....++.++|.++...+++++|+..+++++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 567888999999999999999999999988 5556778999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
+|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++..
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 73 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999998887654
No 71
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.51 E-value=8.7e-14 Score=134.86 Aligned_cols=116 Identities=12% Similarity=0.087 Sum_probs=110.3
Q ss_pred HHHHHHhhhHHhhhcC-HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 264 IRTIKNSGNEYFKLNR-MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~-~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
+..+..+|..+.+.|+ +++|+..|++||.+ +|....+|+++|.++.++|++++|+.+|+++|+
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l----------------~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ 194 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIEE----------------QPKNYQVWHHRRVLVEWLRDPSQELEFIADILN 194 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 5668889999999997 99999999999999 888999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.++..+
T Consensus 195 ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l 247 (382)
T 2h6f_A 195 QDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNT 247 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred hCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998873
No 72
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.50 E-value=2.4e-14 Score=120.15 Aligned_cols=94 Identities=13% Similarity=0.054 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
+|....+++++|.+++++|+|++|+..|++++.++|+++.+|+.+|.++..+|+|++|+..|+++++++|+++.++..++
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg 111 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTG 111 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++..+++..+..+
T Consensus 112 ~~~~~lg~~~eA~~ 125 (151)
T 3gyz_A 112 QCQLRLKAPLKAKE 125 (151)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99999988877654
No 73
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.50 E-value=9.9e-14 Score=128.77 Aligned_cols=102 Identities=23% Similarity=0.375 Sum_probs=98.2
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..++..|+.+++.|+|++|+..|++|+.+ .|....++.++|.+|.++++|++|+.++++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR----------------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999998 7778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~ 381 (414)
+|++.++++++|.++..+|++++|+..|+++++++|++
T Consensus 68 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 68 DGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999976
No 74
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.49 E-value=8.5e-14 Score=111.12 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=88.5
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy793 276 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRG 355 (414)
Q Consensus 276 ~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g 355 (414)
..|++++|+..|++|+++-. .+|....++.++|.+|.++|+|++|+..++++++++|+++.+++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~-------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 68 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGL-------------QGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYA 68 (117)
T ss_dssp -----CCCHHHHHHHHSSCC-------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCC-------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 36889999999999998610 03778899999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 356 RAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 356 ~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
.++..+|++++|+..|+++++..|+++.+......+
T Consensus 69 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 69 MVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999999999999999999999999998876554433
No 75
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.49 E-value=5.7e-14 Score=140.34 Aligned_cols=115 Identities=19% Similarity=0.359 Sum_probs=109.3
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
+.+..+..+|+.++++|+|++|+..|++|+++ .|....+|.++|.+|.++++|++|+.++++|+
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 67 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL----------------NPSNAIYYGNRSLAYLRTECYGYALGDATRAI 67 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45667888999999999999999999999999 77788999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 392 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 392 (414)
+++|+++.+++++|.+|..+|++++|++.|+++++++|++..++..++.+.
T Consensus 68 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~ 118 (477)
T 1wao_1 68 ELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 118 (477)
T ss_dssp HSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998883
No 76
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.48 E-value=3.8e-13 Score=120.00 Aligned_cols=118 Identities=15% Similarity=0.179 Sum_probs=111.3
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+...|..++..|+|++|+..|++|+.+ .|....++.++|.+|..++++++|+..++++++++
T Consensus 43 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 43 VTAYNCGVCADNIKKYKEAADYFDIAIKK----------------NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHT----------------TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHHh----------------CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 35667999999999999999999999998 78889999999999999999999999999999999
Q ss_pred CCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHHH
Q psy793 345 PNNV-------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKEIAFVRKQMRHH 398 (414)
Q Consensus 345 p~~~-------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~~~~ 398 (414)
|++. .+|+.+|.++..+|++++|+..|+++++++|+ +..++..++.++...++.
T Consensus 107 p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 107 PGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9998 77999999999999999999999999999999 999999999998877776
No 77
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.47 E-value=7.4e-13 Score=113.92 Aligned_cols=120 Identities=16% Similarity=0.216 Sum_probs=98.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------C-------cHHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------Q-------SKTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~-------~~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
+..+...|..+++.|++++|+..+.+++...+..... . .........|....++..+|.+|.
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~ 118 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 4557788888889999999999888887653211110 0 022333445667889999999999
Q ss_pred HhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 326 KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
++|+|++|+..++++++++|.++.+|+++|.+|..+|++++|+..|++|++++|+++.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 9999999999999999999999999999999999999999999999999999997643
No 78
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.47 E-value=3.7e-13 Score=109.19 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=90.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q psy793 309 FRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEI 388 (414)
Q Consensus 309 ~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 388 (414)
++|.....+.++|.+|++.|+|++|+..++++|+++|.++.+|+++|.++..+|++++|+.+|+++++++|++..++..+
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy793 389 AFVRKQMRHHLNLEK 403 (414)
Q Consensus 389 ~~~~~~~~~~~~~~k 403 (414)
+.++..+++..+..+
T Consensus 88 g~~~~~~~~~~~A~~ 102 (126)
T 4gco_A 88 AACLVAMREWSKAQR 102 (126)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCHHHHHH
Confidence 999999988877644
No 79
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.44 E-value=1.2e-12 Score=115.61 Aligned_cols=107 Identities=18% Similarity=0.188 Sum_probs=93.3
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN 347 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~ 347 (414)
...|..+++.|+|++|+..|++++++ +|....++.++|.+|..+|++++|+.+++++++++|++
T Consensus 58 ~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 58 TELALAYKKNRNYDKAYLFYKELLQK----------------APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 34999999999999999999999999 88889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-----------------------------------cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 348 VKALFRRGRAQVS-----------------------------------MNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 348 ~~a~~~~g~~~~~-----------------------------------lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
+.+|+++|.+|+. +|+|++|+.+|++|++++|+. .+...+..+
T Consensus 122 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i 199 (208)
T 3urz_A 122 LAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKI 199 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHH
Confidence 9888888777643 356889999999999999974 344445444
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.43 E-value=1e-12 Score=115.67 Aligned_cols=122 Identities=16% Similarity=0.179 Sum_probs=110.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|++++.. ...++.++|.+|.++|+|++|+.+++++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~~-------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 65 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQDP-------------------HSRICFNIGCMYTILKNMTEAEKAFTRSIN 65 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSSC-------------------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC-------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4566889999999999999999999998521 246899999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ----------------QILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~----------------~~~~~l~~~~~~~~~~~~~~k 403 (414)
++|+++.+++++|.++..+|++++|+..|++++++.|.+. .++..++.++..+++..+..+
T Consensus 66 ~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 142 (213)
T 1hh8_A 66 RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEE 142 (213)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHH
Confidence 9999999999999999999999999999999999988877 999999999988887766543
No 81
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.42 E-value=2.2e-12 Score=110.32 Aligned_cols=112 Identities=15% Similarity=0.214 Sum_probs=102.6
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHH-HHHhhCH--HHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAV-QLKFKAY--KRAINLCDDI 340 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~~l~~~--~~A~~~~~~a 340 (414)
+..+...|..++..|+|++|+..|.+++.+ .|....++.++|.+ +...+++ ++|+..++++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~a 107 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQL----------------RGENAELYAALATVLYYQASQHMTAQTRAMIDKA 107 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------HCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 467889999999999999999999999999 67778899999999 8899999 9999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 341 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 341 l~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
++++|++..+++.+|.++..+|++++|+..|+++++++|++......+..+
T Consensus 108 l~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i 158 (177)
T 2e2e_A 108 LALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESI 158 (177)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHH
T ss_pred HHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 999999999999999999999999999999999999999987655544444
No 82
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.41 E-value=5.8e-12 Score=113.38 Aligned_cols=139 Identities=12% Similarity=0.164 Sum_probs=118.4
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC----------CcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS----------QSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRA 333 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~----------~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A 333 (414)
+..+...|..+++.|++++|+..|++++.+.+..... ..........|....++.++|.++..+|++++|
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 158 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNA 158 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHH
Confidence 6778899999999999999999999999852110000 001122224677889999999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 334 INLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 334 ~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+..++++++++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++..+..
T Consensus 159 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~ 227 (258)
T 3uq3_A 159 VKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL 227 (258)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998887776553
No 83
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.41 E-value=3.8e-12 Score=102.12 Aligned_cols=123 Identities=20% Similarity=0.324 Sum_probs=111.9
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+...|..++..|++++|+..|.+++.. .+....++.++|.++...+++++|+..+++++...
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 65 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 65 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHc----------------CCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHC
Confidence 34678899999999999999999999987 55567789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
|.+..+++.+|.++..+|++++|+..++++++..|.+..++..++.++...++..+..+
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 124 (136)
T 2fo7_A 66 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIE 124 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHH
Confidence 99999999999999999999999999999999999999999999999887776655443
No 84
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.41 E-value=7.6e-13 Score=103.14 Aligned_cols=100 Identities=9% Similarity=0.046 Sum_probs=94.4
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.+...|..++..|+|++|+..|++++++ .|....++.++|.++..+++|++|+..++++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~ 71 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQL----------------DPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIE 71 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHh----------------CcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3667899999999999999999999998 566678899999999999999999999999999999
Q ss_pred C--CHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC
Q psy793 346 N--NVKALFRRGRAQVSM-NNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 346 ~--~~~a~~~~g~~~~~l-g~~~~A~~~~~~al~l~P~~ 381 (414)
. +..+++.+|.++..+ |++++|+..++++++..|.+
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 72 DEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred ccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9 999999999999999 99999999999999999975
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.40 E-value=7e-13 Score=110.71 Aligned_cols=94 Identities=13% Similarity=0.129 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.|....+++++|.+++..|+|++|+..+++++.++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 96 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAA 96 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++..+++..+..+
T Consensus 97 ~~~~~~g~~~~A~~ 110 (148)
T 2vgx_A 97 ECLLQXGELAEAES 110 (148)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99998888776543
No 86
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.40 E-value=2.6e-12 Score=128.16 Aligned_cols=122 Identities=15% Similarity=0.134 Sum_probs=114.9
Q ss_pred HHHHHhhhHHhhh---------cCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHh--------
Q psy793 265 RTIKNSGNEYFKL---------NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-------- 327 (414)
Q Consensus 265 ~~~~~~G~~~~~~---------~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-------- 327 (414)
..+...|..++.. |+|++|+..|++|+++ .|....+|.++|.+|..+
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~~~~~~~~~ 234 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM----------------DVLDGRSWYILGNAYLSLYFNTGQNP 234 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHHHHhhcccc
Confidence 4577889999999 9999999999999999 788889999999999999
Q ss_pred hCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 328 KAYKRAINLCDDILLMEP---NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 328 ~~~~~A~~~~~~al~~~p---~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
++|++|+.+++++++++| .++.+|+++|.+|..+|++++|+..|+++++++|++..++..++.++..+++..+.-
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi 312 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLL 312 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999999999999999988876653
No 87
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.39 E-value=6.9e-12 Score=106.68 Aligned_cols=123 Identities=20% Similarity=0.301 Sum_probs=113.1
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
...+...|..++..|++++|+..|.+++.. .|....++.++|.++...+++++|+..+++++..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 105 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLAD----------------APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEA 105 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 455788899999999999999999999988 5666788999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+|.+..+++.+|.++..+|++++|+..|+++++..|.+..++..++.++...++..+..
T Consensus 106 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 164 (186)
T 3as5_A 106 NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEAL 164 (186)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999999999999999999999999999999999999999998887766544
No 88
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=3.1e-12 Score=115.16 Aligned_cols=113 Identities=20% Similarity=0.307 Sum_probs=106.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|++++.. .|....++.++|.++.+++++++|+.+++++++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 138 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR----------------APEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc----------------CcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3567888999999999999999999999998 666778999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL------PNDQQILKEIAFV 391 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~~ 391 (414)
++|+++.+++.+|.++..+|++++|+..|+++++++ |++..++..+..+
T Consensus 202 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 202 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred hCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999999999999999999999 9999998888765
No 89
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.38 E-value=3.4e-12 Score=127.37 Aligned_cols=123 Identities=11% Similarity=0.007 Sum_probs=115.3
Q ss_pred HHHHHHhhhHHhhhcCH-HHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 264 IRTIKNSGNEYFKLNRM-HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~-~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
+..+..+|..++..|+| ++|+..|++|+++ +|....+|.++|.+|.++|++++|+.+++++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 165 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKL----------------EPELVEAWNQLGEVYWKKGDVTSAHTCFSGALT 165 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 56788999999999999 9999999999999 788889999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH--------HHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSM---------NNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM--------RHHLNLEK 403 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~l---------g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~--------~~~~~~~k 403 (414)
++|+ ..+++.+|.++..+ |++++|+..|+++++++|++..++..++.++..+ ++..+..+
T Consensus 166 ~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~ 242 (474)
T 4abn_A 166 HCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALS 242 (474)
T ss_dssp TCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 9998 79999999999999 9999999999999999999999999999999888 66665543
No 90
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.37 E-value=5e-12 Score=128.88 Aligned_cols=123 Identities=14% Similarity=0.126 Sum_probs=115.6
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|++|+++ .|....++.++|.+|..+|++++|+.++++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 86 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLAL----------------HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDA 86 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 567889999999999999999999999998 7778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH---HHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM---RHHLNLE 402 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~---~~~~~~~ 402 (414)
+|++..+++++|.++..+|++++|+..|+++++++|++..++..++.++..+ ++..+..
T Consensus 87 ~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~ 148 (568)
T 2vsy_A 87 APEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLS 148 (568)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHH
Confidence 9999999999999999999999999999999999999999999999999888 6655543
No 91
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.36 E-value=1.3e-11 Score=112.43 Aligned_cols=114 Identities=16% Similarity=0.104 Sum_probs=105.5
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..++..|++++|+..|++++.+ .|....++.++|.+|..+|++++|+.++++++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al 104 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALAI----------------RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVL 104 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc----------------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 34677889999999999999999999999998 67778899999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
+++|.+..+++.+|.++..+|++++|+..|+++++++|++......+..+
T Consensus 105 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 105 ELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999998766655544
No 92
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.36 E-value=1.3e-12 Score=136.26 Aligned_cols=122 Identities=11% Similarity=0.048 Sum_probs=109.2
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+..+|..+++.|+|++|+..|++|+++ +|....+|+++|.+|.++|+|++|+..|++|++++
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAER----------------VGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------HCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhcc----------------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45677899999999999999999999998 78888899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
|+++.+++++|.++..+|++++ +..|++|++++|++..++.+++.++..+++..+...
T Consensus 498 P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~ 555 (681)
T 2pzi_A 498 PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVR 555 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999 999999999999999999999999888887766543
No 93
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.36 E-value=2.4e-12 Score=117.50 Aligned_cols=126 Identities=13% Similarity=0.157 Sum_probs=107.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..++..|..+++.|+|++|+..|++++...+. .+....+++++|.||+++|+|++|+..+++++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 81 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-------------HEWAADAQFYLARAYYQNKEYLLAASEYERFIQI 81 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-------------CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 567899999999999999999999999987211 1233789999999999999999999999999999
Q ss_pred CCCC---HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCCHHHH-----------------HHHHHHHHHH
Q psy793 344 EPNN---VKALFRRGRAQVS--------MNNFEQGLQDYEQALDLLPNDQQIL-----------------KEIAFVRKQM 395 (414)
Q Consensus 344 ~p~~---~~a~~~~g~~~~~--------lg~~~~A~~~~~~al~l~P~~~~~~-----------------~~l~~~~~~~ 395 (414)
.|++ ..+++.+|.++.. +|++++|+..|+++++.+|++..+. ..++.++...
T Consensus 82 ~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~ 161 (261)
T 3qky_A 82 YQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERR 161 (261)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8854 6799999999999 9999999999999999999987666 5556666666
Q ss_pred HHHHHHH
Q psy793 396 RHHLNLE 402 (414)
Q Consensus 396 ~~~~~~~ 402 (414)
++..+..
T Consensus 162 g~~~~A~ 168 (261)
T 3qky_A 162 ELYEAAA 168 (261)
T ss_dssp TCHHHHH
T ss_pred cCHHHHH
Confidence 6555443
No 94
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.36 E-value=1.8e-11 Score=111.65 Aligned_cols=119 Identities=14% Similarity=0.123 Sum_probs=106.6
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH--------hhCHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK--------FKAYKRAIN 335 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--------l~~~~~A~~ 335 (414)
...+...|..+++.|+|++|+..|++++...+. .+....+++++|.|+++ ++++++|+.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~-------------~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~ 118 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQI-------------DPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIE 118 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-------------CTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC-------------CchhHHHHHHHHHHHHHhcccccccchhHHHHHH
Confidence 566889999999999999999999999998321 22556889999999999 999999999
Q ss_pred HHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCC---CHHHHHHHHHHHHHH
Q psy793 336 LCDDILLMEPNNVKAL-----------------FRRGRAQVSMNNFEQGLQDYEQALDLLPN---DQQILKEIAFVRKQM 395 (414)
Q Consensus 336 ~~~~al~~~p~~~~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~P~---~~~~~~~l~~~~~~~ 395 (414)
.++++++..|++..+. +.+|.+|..+|++++|+..|+++++..|+ ...++..++.++..+
T Consensus 119 ~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 119 AFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 9999999999987666 89999999999999999999999999998 567889999998877
No 95
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.36 E-value=7.3e-12 Score=110.07 Aligned_cols=104 Identities=14% Similarity=0.214 Sum_probs=97.3
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|.+|+.+ .|....++.++|.+|..+++|++|+.++++++++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 100 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSINR----------------DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQ 100 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 456889999999999999999999999998 6777899999999999999999999999999998
Q ss_pred CCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 344 EPNNV----------------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 344 ~p~~~----------------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
.|.+. .+++++|.++..+|++++|+..|+++++++|++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 156 (213)
T 1hh8_A 101 LRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRH 156 (213)
T ss_dssp TTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGG
T ss_pred CCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccccc
Confidence 88776 99999999999999999999999999999997643
No 96
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.34 E-value=5.1e-12 Score=120.41 Aligned_cols=124 Identities=10% Similarity=0.127 Sum_probs=111.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|++++|+..|++++.+ .|....++.++|.++.++|++++|+..+++++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 280 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALSV----------------RPNDYLLWNKLGATLANGNQSEEAVAAYRRALEL 280 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456778899999999999999999999988 6667789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----------HHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-----------QQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~-----------~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+|++..+++.+|.++..+|++++|+..|++++++.|++ ..++..++.++..+++..+..+
T Consensus 281 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 351 (368)
T 1fch_A 281 QPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYGA 351 (368)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHHH
Confidence 99999999999999999999999999999999999988 8899999999988887766543
No 97
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.34 E-value=1.8e-11 Score=115.49 Aligned_cols=123 Identities=26% Similarity=0.368 Sum_probs=109.2
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
......|..+++.|++++|+..|++++...+.. ......++.++|.++.++|++++|+..++++++++
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 302 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMKTEPSV------------AEYTVRSKERICHCFSKDEKPVEAIRICSEVLQME 302 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSS------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc------------hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 345567999999999999999999999973221 23345678899999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 399 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 399 (414)
|+++.+++.+|.++..+|++++|+..|+++++++|++..++..+..++..+++.+
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~ 357 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQ 357 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999988777543
No 98
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.34 E-value=1.7e-11 Score=109.53 Aligned_cols=121 Identities=18% Similarity=0.152 Sum_probs=83.2
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|++++|+..|.+++.. .+....++.++|.++..++++++|+..+++++++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 120 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALEL----------------DSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRA 120 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc----------------CCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 455777888888888888888888888877 4445566666666666666666666666666666
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
+|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+
T Consensus 121 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (243)
T 2q7f_A 121 GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDE 177 (243)
T ss_dssp TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHH
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHH
Confidence 666666666666666666666666666666666666666666666666655554443
No 99
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.33 E-value=1.6e-11 Score=109.58 Aligned_cols=110 Identities=13% Similarity=0.183 Sum_probs=96.4
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+..+|..+++.|+|++|+..|++++...+. .+....+++++|.+|.++|+|++|+..++++++.
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-------------~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~ 70 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-------------GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRL 70 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-------------STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 456889999999999999999999999987221 2334578999999999999999999999999999
Q ss_pred CCCCHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhhCCCCHHHHH
Q psy793 344 EPNNVK---ALFRRGRAQVS------------------MNNFEQGLQDYEQALDLLPNDQQILK 386 (414)
Q Consensus 344 ~p~~~~---a~~~~g~~~~~------------------lg~~~~A~~~~~~al~l~P~~~~~~~ 386 (414)
+|++.. +++.+|.++.. +|++++|+..|+++++..|++..+..
T Consensus 71 ~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~ 134 (225)
T 2yhc_A 71 NPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTD 134 (225)
T ss_dssp CTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHH
T ss_pred CcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHH
Confidence 999875 89999999986 57999999999999999999875543
No 100
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.33 E-value=7.9e-12 Score=106.31 Aligned_cols=124 Identities=14% Similarity=0.120 Sum_probs=114.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|++++|+..|++++.. .|....++.++|.++...+++++|+..++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 70 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYDA----------------DAFDVDVALHLGIAYVKTGAVDRGTELLERSLA 70 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCCT----------------TSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CccChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 4667889999999999999999999999987 555678899999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
++|.+..+++.+|.++..+|++++|+..|+++++.+|++..++..++.++...++..+..
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~ 130 (186)
T 3as5_A 71 DAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAI 130 (186)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHH
Confidence 999999999999999999999999999999999999999999999999988877766543
No 101
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.33 E-value=6.3e-12 Score=120.07 Aligned_cols=124 Identities=11% Similarity=0.157 Sum_probs=108.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+...|++++|+..|++++++ .|....+|.++|.+|.++|++++|+..+++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 276 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTV----------------RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEI 276 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 445778899999999999999999999998 6777789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------------DQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~------------~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+|+++.+++.+|.++..+|++++|+..|+++++++|+ +..++..++.+...+++....++
T Consensus 277 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~ 348 (365)
T 4eqf_A 277 QPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQA 348 (365)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHH
Confidence 9999999999999999999999999999999999887 35678888888888777665544
No 102
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.32 E-value=1.9e-12 Score=110.78 Aligned_cols=119 Identities=10% Similarity=0.027 Sum_probs=105.0
Q ss_pred HhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCH
Q psy793 269 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV 348 (414)
Q Consensus 269 ~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~ 348 (414)
..++.++..|+|++|+..|++++.. .|....++.++|.+|..+++|++|+.+++++++++|+++
T Consensus 15 ~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 78 (177)
T 2e2e_A 15 DPLHQFASQQNPEAQLQALQDKIRA----------------NPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENA 78 (177)
T ss_dssp TTTCCCC-----CCCCHHHHHHHHH----------------CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCH
T ss_pred hhhhhhhhccCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 3566788899999999999999998 677788999999999999999999999999999999999
Q ss_pred HHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 349 KALFRRGRA-QVSMNNF--EQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 349 ~a~~~~g~~-~~~lg~~--~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.+++.+|.+ +...|++ ++|+..|+++++++|++..++..++.++...++..+...
T Consensus 79 ~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 79 ELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE 136 (177)
T ss_dssp HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH
Confidence 999999999 8899999 999999999999999999999999999988877766544
No 103
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.32 E-value=4.8e-12 Score=104.46 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.|.....++++|.++++.|+|++|+..+++++.++|+++.+|+.+|.++..+|++++|+..|+++++++|+++.++..++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 93 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAA 93 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHH
Confidence 78888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++..+++..+..+
T Consensus 94 ~~~~~~g~~~~A~~ 107 (142)
T 2xcb_A 94 ECHLQLGDLDGAES 107 (142)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99998888776543
No 104
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.32 E-value=7.8e-13 Score=103.49 Aligned_cols=94 Identities=20% Similarity=0.299 Sum_probs=76.5
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|++|+++ .|....++.++|.|+.++|+|++|+.++++++++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA----------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 556778888888888888888888888887 6666778888888888888888888888888888
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy793 344 EPNN------VKALFRRGRAQVSMNNFEQGLQDYEQ 373 (414)
Q Consensus 344 ~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~ 373 (414)
+|++ ..+++++|.++..+|+++.|+..+++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 8887 78888888888888887777665554
No 105
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=8.1e-12 Score=119.30 Aligned_cols=120 Identities=12% Similarity=0.133 Sum_probs=104.7
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHH--HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
+...|..+.+.|++++|+..|++++.+ .|. ...++.++|.+|.++|++++|+..++++++++
T Consensus 180 ~~~l~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 243 (365)
T 4eqf_A 180 TRRMSKSPVDSSVLEGVKELYLEAAHQ----------------NGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR 243 (365)
T ss_dssp ---------CCHHHHHHHHHHHHHHHH----------------SCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHh----------------CcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 445688999999999999999999998 555 67789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++..+++..+..
T Consensus 244 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 301 (365)
T 4eqf_A 244 PEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAV 301 (365)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999998888766654
No 106
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.32 E-value=1.3e-11 Score=110.33 Aligned_cols=123 Identities=14% Similarity=0.178 Sum_probs=108.4
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
...+...|..++..|++++|+..|+++++. .+....++.++|.++.+++++++|+..+++++++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 154 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALRA----------------GMENGDLFYMLGTVLVKLEQPKLALPYLQRAVEL 154 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 345778899999999999999999999998 5556678899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+|.+..+++.+|.++..+|++++|+..|+++++.+|++..++..++.++...++..+..
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 213 (243)
T 2q7f_A 155 NENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKAL 213 (243)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHH
T ss_pred CCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHH
Confidence 99999999999999999999999999999999999999999999998888776665543
No 107
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.31 E-value=1.2e-12 Score=136.62 Aligned_cols=113 Identities=10% Similarity=0.001 Sum_probs=107.1
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+..+|..+++.|+|++|+..|++|+++ +|....+|+++|.+|.++|+|++ +.+|++|++++
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l----------------~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~ 530 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLDT----------------FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTN 530 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhC
Confidence 45677899999999999999999999999 78888999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
|++..+|+++|.++..+|++++|+..|+++++++|++..++..++.++..
T Consensus 531 P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 531 DGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred CchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999988744
No 108
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.31 E-value=1.4e-11 Score=97.56 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q psy793 282 DAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSM 361 (414)
Q Consensus 282 ~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~l 361 (414)
.|+..|+++++. .|....+++++|.+|..+|+|++|+..++++++++|.+..+|+.+|.++..+
T Consensus 3 ~a~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLAQ----------------GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHTT----------------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHc
Confidence 578889999987 6777889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHHHHHHH
Q psy793 362 NNFEQGLQDYEQALDLLPN--DQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 362 g~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~~~~~~ 400 (414)
|++++|+..|+++++++|. +..+...+..+...+++...
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~~~~ 107 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLAREDA 107 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhccccC
Confidence 9999999999999999884 55666666666666655443
No 109
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.31 E-value=3.4e-11 Score=105.91 Aligned_cols=138 Identities=12% Similarity=0.043 Sum_probs=83.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------Cc-------HHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QS-------KTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
+..+...|..++..|++++|+..|++++...+..... .. ........|....++.++|.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4455666666666666666666666666652110000 00 00111113444556677777777
Q ss_pred Hh-hCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 326 KF-KAYKRAINLCDDILL--MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 326 ~l-~~~~~A~~~~~~al~--~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
.+ +++++|+..++++++ .+|.+..+++.+|.++..+|++++|+..|+++++.+|++..++..++.++...++..+.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDA 166 (225)
T ss_dssp TTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHH
Confidence 77 777777777777776 45555667777777777777777777777777777777777777777776666655544
No 110
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.31 E-value=2.9e-11 Score=108.91 Aligned_cols=135 Identities=11% Similarity=0.025 Sum_probs=69.9
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------Cc-------HHHHHh--hHHHHHHHHHHHHHHHH
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QS-------KTQQKH--FRSYYTAALLNMAAVQL 325 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~-------~~~~~~--~~~~~~~~~~nla~~~~ 325 (414)
.+...|..++..|++++|+..|.+++...+..... .. ...... ..+....++.++|.++.
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~ 152 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSL 152 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHH
Confidence 45566666777777777777777776652100000 00 000000 12334455555555555
Q ss_pred HhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 326 KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
++|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++..|.+..++..+..++...++..+
T Consensus 153 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (252)
T 2ho1_A 153 QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDT 227 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHH
Confidence 555555555555555555555555555555555555555555555555555555555555555555554444433
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.30 E-value=1.3e-11 Score=105.83 Aligned_cols=120 Identities=13% Similarity=0.050 Sum_probs=98.5
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHH-------
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCD------- 338 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~------- 338 (414)
.+...|..++..|++++|+..|+++++. +|....++.++|.++.++|++++|+..++
T Consensus 8 ~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 8 QLLKQVSELLQQGEHAQALNVIQTLSDE----------------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHTSCHH----------------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH----------------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 3677899999999999999999999998 77778888888888888888777765544
Q ss_pred ---------------------------HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHH
Q psy793 339 ---------------------------DILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND--QQILKEIA 389 (414)
Q Consensus 339 ---------------------------~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~l~ 389 (414)
++++++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~ 151 (176)
T 2r5s_A 72 DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFM 151 (176)
T ss_dssp CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHH
T ss_pred ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHH
Confidence 4445577888889999999999999999999999999999875 56888888
Q ss_pred HHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNL 401 (414)
Q Consensus 390 ~~~~~~~~~~~~ 401 (414)
.++..+++..+.
T Consensus 152 ~~~~~~g~~~~A 163 (176)
T 2r5s_A 152 DILSALGQGNAI 163 (176)
T ss_dssp HHHHHHCSSCHH
T ss_pred HHHHHhCCCCcH
Confidence 888877766543
No 112
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.30 E-value=1.8e-11 Score=113.84 Aligned_cols=122 Identities=10% Similarity=-0.019 Sum_probs=106.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH-------
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL------- 336 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~------- 336 (414)
...+...|..+...|++++|+..|+++++. +|....+++++|.++..+|++++|+..
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~----------------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~ 180 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQL----------------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQ 180 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHHh----------------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchh
Confidence 456788999999999999999999999999 777788888888888888888877655
Q ss_pred ---------------------------HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHH
Q psy793 337 ---------------------------CDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND--QQILKE 387 (414)
Q Consensus 337 ---------------------------~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~ 387 (414)
+++++..+|++..+++.+|.++..+|++++|+..|+++++.+|++ ..++..
T Consensus 181 ~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 181 DQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp GCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred hcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHH
Confidence 445566789999999999999999999999999999999999998 889999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 388 IAFVRKQMRHHLNL 401 (414)
Q Consensus 388 l~~~~~~~~~~~~~ 401 (414)
+..++..+++..+.
T Consensus 261 l~~~~~~~g~~~~a 274 (287)
T 3qou_A 261 FQEILAALGTGDAL 274 (287)
T ss_dssp HHHHHHHHCTTCHH
T ss_pred HHHHHHHcCCCCcH
Confidence 99999888765443
No 113
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.29 E-value=2.8e-11 Score=97.28 Aligned_cols=92 Identities=11% Similarity=0.136 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
.....+.++|.++++.++|++|+..++++++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q psy793 392 RKQMRHHLNLEK 403 (414)
Q Consensus 392 ~~~~~~~~~~~k 403 (414)
+..+++..+...
T Consensus 82 ~~~~~~~~~A~~ 93 (126)
T 3upv_A 82 QIAVKEYASALE 93 (126)
T ss_dssp HHHTTCHHHHHH
T ss_pred HHHHhCHHHHHH
Confidence 998888766543
No 114
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.29 E-value=4.1e-11 Score=105.36 Aligned_cols=92 Identities=12% Similarity=-0.031 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP-NDQQILKEI 388 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P-~~~~~~~~l 388 (414)
.+....++.++|.++.++|++++|+..++++++.+|.+..+++.+|.++..+|++++|+..|++++++.| .+..++..+
T Consensus 109 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 188 (225)
T 2vq2_A 109 YPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLG 188 (225)
T ss_dssp CSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3455788999999999999999999999999999999999999999999999999999999999999999 999998888
Q ss_pred HHHHHHHHHHHHH
Q psy793 389 AFVRKQMRHHLNL 401 (414)
Q Consensus 389 ~~~~~~~~~~~~~ 401 (414)
..+....+...+.
T Consensus 189 ~~~~~~~~~~~~a 201 (225)
T 2vq2_A 189 WKIAKALGNAQAA 201 (225)
T ss_dssp HHHHHHTTCHHHH
T ss_pred HHHHHhcCcHHHH
Confidence 8887776665544
No 115
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.29 E-value=2.4e-11 Score=114.61 Aligned_cols=111 Identities=15% Similarity=0.228 Sum_probs=104.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|++++.. .|....++.++|.++..+|++++|+..+++++++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 66 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG----------------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVIAL 66 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 567899999999999999999999999998 6777889999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP---NDQQILKEIAF 390 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P---~~~~~~~~l~~ 390 (414)
+|++..+++.+|.++..+|++++|+..|+++++++| ++..++..+..
T Consensus 67 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 67 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 999999999999999999999999999999999999 88888887743
No 116
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.29 E-value=7.3e-12 Score=114.14 Aligned_cols=123 Identities=13% Similarity=0.038 Sum_probs=63.5
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------CcHHHHHhh---------H-HHHHHHHHHHHHHHH
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QSKTQQKHF---------R-SYYTAALLNMAAVQL 325 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~~~~~~~~---------~-~~~~~~~~nla~~~~ 325 (414)
+...|..++..|+|++|+..|+++++..+..... ...++.... . .....+|.++|.++.
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~ 85 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILM 85 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence 5566667777777777777777776652111100 000000000 0 111334555555555
Q ss_pred HhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 326 KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.++++++|+.+++++++++|.++.+++.+|.++..+|++++|+..|+++++++|.+..++..++
T Consensus 86 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 5555555555555555555555555555555555555555555555555555555555555555
No 117
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.29 E-value=1.8e-11 Score=118.07 Aligned_cols=117 Identities=18% Similarity=0.245 Sum_probs=70.1
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+++.|++++|+..|++++++ .|....+|.++|.++.++|++++|+..+++++++
T Consensus 67 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 130 (388)
T 1w3b_A 67 AEAYSNLGNVYKERGQLQEAIEHYRHALRL----------------KPDFIDGYINLAAALVAAGDMEGAVQAYVSALQY 130 (388)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHc----------------CcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456888999999999999999999999987 3444444555555555555555555555555555
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 396 (414)
+|++..++..+|.++..+|++++|+..|+++++.+|++..++..++.++...+
T Consensus 131 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 183 (388)
T 1w3b_A 131 NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQG 183 (388)
T ss_dssp CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTT
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 55555555555555555555555555555555555555444444444444333
No 118
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.29 E-value=2.2e-11 Score=109.75 Aligned_cols=139 Identities=16% Similarity=0.117 Sum_probs=87.2
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------Cc-------HHHHHhhHHHHHHHHHHHHHHH
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QS-------KTQQKHFRSYYTAALLNMAAVQ 324 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~nla~~~ 324 (414)
.+..+...|..++..|++++|+..|++++...+..... .. ..+.....|....++.++|.++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 115 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFL 115 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHH
Confidence 37889999999999999999999999999872211100 00 1111222233445566666666
Q ss_pred HHhhCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 325 LKFKAYKRAINLCDDILL--MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 325 ~~l~~~~~A~~~~~~al~--~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
..++++++|+..+++++. ..|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...++..+.
T Consensus 116 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 194 (252)
T 2ho1_A 116 YEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPA 194 (252)
T ss_dssp HHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH
Confidence 666666666666666666 55556666666666666666666666666666666666666666666666555544443
No 119
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.28 E-value=3e-11 Score=112.72 Aligned_cols=123 Identities=13% Similarity=0.154 Sum_probs=113.7
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+++.|++++|+..|++++.. .|....++.++|.++..++++++|+..+++++++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 235 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVEL----------------RPDDAQLWNKLGATLANGNRPQEALDAYNRALDI 235 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 455777899999999999999999999998 6667789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------------CHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------------DQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~------------~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+|++..+++.+|.++..+|++++|+..|++++++.|+ +..++..++.++..+++..+..
T Consensus 236 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 306 (327)
T 3cv0_A 236 NPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVE 306 (327)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHH
Confidence 9999999999999999999999999999999999999 7899999999998888776654
No 120
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.28 E-value=3e-11 Score=116.39 Aligned_cols=139 Identities=15% Similarity=0.121 Sum_probs=99.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-------------Cc-----HHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-------------QS-----KTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-------------~~-----~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
+..+...|..+.+.|++++|+..|++++++-+..... .. ........|....++.++|.++.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 3456778888888888888888888888762211100 00 11222334556677788888888
Q ss_pred HhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 326 KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
++|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.++...++..+..
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 325 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAV 325 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 88888888888888888888888888888888888888888888888888888888888888887777766665543
No 121
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.28 E-value=5.2e-11 Score=110.81 Aligned_cols=130 Identities=6% Similarity=-0.005 Sum_probs=108.0
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHh-hCHHHHHHHHHHHH
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-KAYKRAINLCDDIL 341 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-~~~~~A~~~~~~al 341 (414)
.+..+.+.|+.+.+.|+|++|+.+|++|+.+.+... .......++.++|.+|..+ |++++|+.++++|+
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g----------~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al 145 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG----------QFRRGANFKFELGEILENDLHDYAKAIDCYELAG 145 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC----------CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH
Confidence 467788999999999999999999999999854332 0223467899999999995 99999999999999
Q ss_pred hcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-------HHHHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ-------ILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 342 ~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~-------~~~~l~~~~~~~~~~~~~~ 402 (414)
++.|.. ..++.++|.++..+|+|++|+..|++++++.|++.. ++..++.++..+++..+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 219 (292)
T 1qqe_A 146 EWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAA 219 (292)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 998754 567999999999999999999999999999988653 4577777777766655543
No 122
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.28 E-value=3.5e-11 Score=109.58 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=108.1
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+...|++++|+..|++++++ .|....++.++|.+|..+|++++|+.++++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVDR----------------DTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc----------------CcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 456788999999999999999999999998 6777789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
+|.++.+++.+|...+..+++++|+..|+++++++|++..++..++.+...+++
T Consensus 138 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 138 TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 999999999999445555699999999999999999999999999998887765
No 123
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.26 E-value=8.7e-11 Score=94.27 Aligned_cols=92 Identities=14% Similarity=0.076 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 316 ALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 316 ~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
.++++|.++++.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.++...
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q psy793 396 RHHLNLEKMTYAR 408 (414)
Q Consensus 396 ~~~~~~~k~~~~~ 408 (414)
++..+... .+.+
T Consensus 99 g~~~~A~~-~~~~ 110 (121)
T 1hxi_A 99 HNANAALA-SLRA 110 (121)
T ss_dssp HHHHHHHH-HHHH
T ss_pred CCHHHHHH-HHHH
Confidence 88877654 3443
No 124
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.26 E-value=1.9e-11 Score=99.05 Aligned_cols=91 Identities=12% Similarity=0.139 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------H
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-------Q 383 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~-------~ 383 (414)
+....++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++. .
T Consensus 5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 456678899999999999999999999999999999999999999999999999999999999999998764 3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy793 384 ILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 384 ~~~~l~~~~~~~~~~~~~ 401 (414)
++..++.++..+++..+.
T Consensus 85 ~~~~lg~~~~~~~~~~~A 102 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLA 102 (127)
T ss_dssp HHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHH
Confidence 555666666655555443
No 125
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.26 E-value=5.3e-11 Score=110.72 Aligned_cols=135 Identities=11% Similarity=0.083 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHH
Q psy793 258 NQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLC 337 (414)
Q Consensus 258 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~ 337 (414)
++..+.+..+...|+.+...|+|++|+.+|.+|+.+.+... ..+....+|.++|.+|.++|++++|+.++
T Consensus 31 ~~~~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~a~~~~~lg~~~~~~g~~~~A~~~~ 100 (292)
T 1qqe_A 31 YKFEEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAG----------NEDEAGNTYVEAYKCFKSGGNSVNAVDSL 100 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 34555667777889999999999999999999999854332 12345789999999999999999999999
Q ss_pred HHHHhcCCCC------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHH
Q psy793 338 DDILLMEPNN------VKALFRRGRAQVSM-NNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 338 ~~al~~~p~~------~~a~~~~g~~~~~l-g~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~ 402 (414)
++|+++.+.. +.++.++|.+|..+ |++++|+..|++|+++.|.+ ..++..++.++..+++..+..
T Consensus 101 ~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 178 (292)
T 1qqe_A 101 ENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS 178 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 9999997653 56899999999995 99999999999999998864 456788888888887776653
No 126
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.26 E-value=5e-11 Score=118.60 Aligned_cols=107 Identities=19% Similarity=0.314 Sum_probs=100.1
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
.+.+..++..|+.+++.|+|++|+..|++++.. .| ...++.++|.|+.++|+|++|+.+++++
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p-~~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALEL----------------KE-DPVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH----------------CC-CHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc----------------Cc-cHHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 467889999999999999999999999999998 55 4788999999999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q psy793 341 LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQI 384 (414)
Q Consensus 341 l~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~ 384 (414)
++++|++..+++.+|.++..+|++++|+..|+++++++|.+...
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccch
Confidence 99999999999999999999999999999999999999866443
No 127
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.26 E-value=5.7e-11 Score=108.06 Aligned_cols=133 Identities=21% Similarity=0.156 Sum_probs=114.9
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..++..|+|++|+..|.+++.+...... ...+....++.++|.+|..++++++|+.++++++
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 112 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLG--------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRAL 112 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcC--------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 34667888999999999999999999999998533200 1136778899999999999999999999999999
Q ss_pred hc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 342 LM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--------LPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 342 ~~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
.+ +|....+++.+|.++..+|++++|+..|++++++ .|....++..++.++...++..+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 189 (283)
T 3edt_B 113 EIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAE 189 (283)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 88 5777889999999999999999999999999999 7777888999999998888776654
No 128
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.26 E-value=3e-11 Score=112.85 Aligned_cols=123 Identities=20% Similarity=0.264 Sum_probs=107.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|++++|+..|++++.+.+....... .+....++.++|.++.++|++++|+..+++++++
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT-------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT-------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc-------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 355778899999999999999999999988432221000 1445678999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
+|++..+++.+|.++..+|++++|+..|+++++++|++..++..++.++.
T Consensus 266 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 315 (330)
T 3hym_B 266 IPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 315 (330)
T ss_dssp STTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998774
No 129
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.26 E-value=6e-11 Score=110.49 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=78.1
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHH----HHHhhCHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAV----QLKFKAYKRAINLCDD 339 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~----~~~l~~~~~A~~~~~~ 339 (414)
...+...|..+.+.|++++|+..|+++++. .|... ..+++.+ +...+++++|+..+++
T Consensus 130 ~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~----------------~p~~~--~~~l~~a~~~l~~~~~~~~eA~~~~~~ 191 (291)
T 3mkr_A 130 LECMAMTVQILLKLDRLDLARKELKKMQDQ----------------DEDAT--LTQLATAWVSLAAGGEKLQDAYYIFQE 191 (291)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCH--HHHHHHHHHHHHHCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhh----------------CcCcH--HHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 345777899999999999999999999987 22211 1122211 2233666666666666
Q ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 340 ILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 340 al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
+++.+|+++.+++.+|.++..+|++++|+..|+++++++|+++.++.+++.+....++..+
T Consensus 192 ~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~e 252 (291)
T 3mkr_A 192 MADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPE 252 (291)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHH
Confidence 6666666666666666666666666666666666666666666666666666655555443
No 130
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.25 E-value=9.4e-11 Score=114.87 Aligned_cols=120 Identities=27% Similarity=0.375 Sum_probs=106.4
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.....|..+++.|++++|+..|++++.+.+. . ......++.++|.++.++|++++|+..++++++++|
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p 326 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMKTEPS-I-----------AEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEP 326 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-S-----------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-c-----------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCc
Confidence 3455699999999999999999999987221 0 123356899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 346 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 346 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.+...+++
T Consensus 327 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 378 (450)
T 2y4t_A 327 DNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQ 378 (450)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999988766554
No 131
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.25 E-value=6e-11 Score=105.89 Aligned_cols=132 Identities=13% Similarity=0.069 Sum_probs=110.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-----------------
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----------------- 326 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----------------- 326 (414)
...+..+|..+++.|+|++|+..|+++++..+.. +....+++.+|.++.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~-------------~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~ 107 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH-------------PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDR 107 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-------------TTHHHHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC-------------CcHHHHHHHHHHHHHhhhhhhhhhhhccchhhc
Confidence 3568889999999999999999999999983321 2223578888888876
Q ss_pred -hhCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHH
Q psy793 327 -FKAYKRAINLCDDILLMEPNNVKAL-----------------FRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ---QIL 385 (414)
Q Consensus 327 -l~~~~~A~~~~~~al~~~p~~~~a~-----------------~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~---~~~ 385 (414)
++++++|+..++++++..|++..++ +.+|.+|+.+|++++|+..|+++++..|+++ .++
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~ 187 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDAL 187 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHH
Confidence 5799999999999999999987654 6789999999999999999999999999986 678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 386 KEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 386 ~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
..++.++..+++..+..+ .++++
T Consensus 188 ~~l~~~~~~~g~~~~A~~-~~~~l 210 (225)
T 2yhc_A 188 PLMENAYRQMQMNAQAEK-VAKII 210 (225)
T ss_dssp HHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHHHHcCCcHHHHH-HHHHH
Confidence 999999999888877654 34443
No 132
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.24 E-value=9.5e-11 Score=87.92 Aligned_cols=85 Identities=22% Similarity=0.423 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAF 390 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 390 (414)
+....++.++|.++..+++|++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHH
Q psy793 391 VRKQM 395 (414)
Q Consensus 391 ~~~~~ 395 (414)
++..+
T Consensus 86 ~~~~~ 90 (91)
T 1na3_A 86 AKQKQ 90 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 87653
No 133
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.23 E-value=1.8e-10 Score=112.77 Aligned_cols=114 Identities=15% Similarity=0.207 Sum_probs=106.2
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..+++.|+|++|+..|++++.. .|....++.++|.++..+|++++|+..+++++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 87 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVDG----------------DPDNYIAYYRRATVFLAMGKSKAALPDLTKVI 87 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34778999999999999999999999999998 67778999999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ---QILKEIAFV 391 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~---~~~~~l~~~ 391 (414)
+++|++..+++.+|.++..+|++++|+..|+++++++|++. .++..+..+
T Consensus 88 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 88 QLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 777666444
No 134
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.23 E-value=5.8e-11 Score=110.88 Aligned_cols=123 Identities=18% Similarity=0.131 Sum_probs=113.0
Q ss_pred HHHHHhhhHHhhhc-CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 265 RTIKNSGNEYFKLN-RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 265 ~~~~~~G~~~~~~~-~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
..+...|..++..| ++++|+..|.+++.+ .|....++.++|.++..++++++|+..+++++++
T Consensus 91 ~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 154 (330)
T 3hym_B 91 VSWFAVGCYYLMVGHKNEHARRYLSKATTL----------------EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQL 154 (330)
T ss_dssp HHHHHHHHHHHHSCSCHHHHHHHHHHHHTT----------------CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHh----------------CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45778899999999 999999999999988 6677788999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.|++..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+..+
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 155 MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 999999999999999999999999999999999999999999999999988877766543
No 135
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.22 E-value=1.2e-10 Score=90.71 Aligned_cols=83 Identities=13% Similarity=0.240 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKE 387 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~ 387 (414)
...+.++|.+++.+|+|++|+..++++++++|.++.+++++|.++..+|++++|+..|+++++++|++ ..++..
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 83 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYR 83 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999998 777777
Q ss_pred HHHHHHHHH
Q psy793 388 IAFVRKQMR 396 (414)
Q Consensus 388 l~~~~~~~~ 396 (414)
++.++..++
T Consensus 84 ~~~~~~~~~ 92 (111)
T 2l6j_A 84 LELAQGAVG 92 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776665
No 136
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.22 E-value=1.2e-10 Score=115.01 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=103.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+..+|..+..+|+|++|+.+|++|+++.+..... ...+.....|.|+|.+|..+|+|++|+.++++++++
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~-------~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i 123 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHAD-------QAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHV 123 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGG-------GCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCcc-------ccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 4557789999999999999999999999986543311 113555678999999999999999999999999976
Q ss_pred C--------CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 344 E--------PNNVKALFRRGRAQVSM--NNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 344 ~--------p~~~~a~~~~g~~~~~l--g~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
. +..+.++..+|.++..+ ++|++|+.+|++|++++|+++.++..++.+...+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~ 187 (472)
T 4g1t_A 124 CEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDN 187 (472)
T ss_dssp HHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred hHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Confidence 3 45678888888887765 479999999999999999999999888887665543
No 137
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.22 E-value=6.3e-11 Score=118.79 Aligned_cols=115 Identities=23% Similarity=0.344 Sum_probs=99.6
Q ss_pred cCCHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHH
Q psy793 254 TVQLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRA 333 (414)
Q Consensus 254 ~~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A 333 (414)
.++.++..+.+..+...|+.+++.|+|++|+..|++++.. .|....++.++|.||.++|++++|
T Consensus 15 ~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~la~~~~~~g~~~~A 78 (537)
T 3fp2_A 15 GLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL----------------DPNEPVFYSNISACYISTGDLEKV 78 (537)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh----------------CCCCcHHHHHHHHHHHHcCCHHHH
Confidence 3457777888999999999999999999999999999999 788889999999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q psy793 334 INLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 385 (414)
Q Consensus 334 ~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 385 (414)
+..++++++++|++..+++.+|.++..+|++++|+..|+ ++.++|+.....
T Consensus 79 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~~~~~ 129 (537)
T 3fp2_A 79 IEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDFDGAS 129 (537)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC---------
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCCChHH
Confidence 999999999999999999999999999999999999996 999998876543
No 138
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.21 E-value=1.4e-10 Score=92.85 Aligned_cols=101 Identities=25% Similarity=0.436 Sum_probs=93.6
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+...|..++..|++++|+..|.+++.. .+....++.++|.++..++++++|+..+++++...
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 99 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELD 99 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHH----------------CCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 44667899999999999999999999988 55566789999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~ 381 (414)
|.+..+++.+|.++..+|++++|+..|+++++++|++
T Consensus 100 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 100 PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999863
No 139
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.21 E-value=9.5e-11 Score=97.89 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh--
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPN-------NVK-----ALFRRGRAQVSMNNFEQGLQDYEQALDL-- 377 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~-------~~~-----a~~~~g~~~~~lg~~~~A~~~~~~al~l-- 377 (414)
.....+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|++|+++
T Consensus 9 ~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 9 VGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 34567899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred -----CCCCHHHH----HHHHHHHHHHHHHHHHHH
Q psy793 378 -----LPNDQQIL----KEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 378 -----~P~~~~~~----~~l~~~~~~~~~~~~~~k 403 (414)
+|++..++ .+++.++..+++..+...
T Consensus 89 ~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~ 123 (159)
T 2hr2_A 89 RRGELNQDEGKLWISAVYSRALALDGLGRGAEAMP 123 (159)
T ss_dssp HHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred ccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHH
Confidence 99999999 999999999988887644
No 140
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.21 E-value=1.4e-10 Score=97.86 Aligned_cols=94 Identities=20% Similarity=0.213 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.+.....+.++|.++++.++|++|+..++++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++..+++..+..+
T Consensus 87 ~~~~~~g~~~~A~~ 100 (164)
T 3sz7_A 87 LARFDMADYKGAKE 100 (164)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHccCHHHHHH
Confidence 99998888776544
No 141
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.20 E-value=1.3e-10 Score=110.51 Aligned_cols=118 Identities=15% Similarity=0.163 Sum_probs=108.3
Q ss_pred HhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHH--HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCC
Q psy793 269 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPN 346 (414)
Q Consensus 269 ~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~ 346 (414)
..|..+ ..|++++|+..|++++.. .|. ...++.++|.++.++|++++|+..+++++.++|+
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~~----------------~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 249 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVRL----------------DPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN 249 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHHH----------------STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHh----------------CcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC
Confidence 345554 889999999999999998 566 6789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 347 NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 347 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+...
T Consensus 250 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 306 (368)
T 1fch_A 250 DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVE 306 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999998888766543
No 142
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.20 E-value=7.8e-11 Score=107.19 Aligned_cols=122 Identities=9% Similarity=-0.002 Sum_probs=108.0
Q ss_pred hhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHH
Q psy793 270 SGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK 349 (414)
Q Consensus 270 ~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~ 349 (414)
.+..+...++|++|+..|.+++...+ .. .+....++.++|.++..+|++++|+..++++++++|.++.
T Consensus 11 ~~~~~~~~~~~~~A~~~~~~~~~~~~-~~-----------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 78 (275)
T 1xnf_A 11 LAVPLQPTLQQEVILARMEQILASRA-LT-----------DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE 78 (275)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHTSSC-CC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred eeeccCccchHHHHHHHHHHHHhccc-cc-----------CchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH
Confidence 44556667999999999999997511 01 4677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 350 ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 350 a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+++.+|.++..+|++++|+..|+++++++|++..++..++.++..+++..+..+
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~ 132 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD 132 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999999999999988877766543
No 143
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.19 E-value=3.8e-10 Score=93.34 Aligned_cols=132 Identities=13% Similarity=0.162 Sum_probs=109.0
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
...+..+...|..++..|+|++|+..|.+++.+.+... .......++.++|.++..++++++|+.+++++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 75 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG----------DKAAERIAYSNLGNAYIFLGEFETASEYYKKT 75 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC----------CchHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45678899999999999999999999999999965422 13445678999999999999999999999999
Q ss_pred HhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHHHHHHHHH
Q psy793 341 LLMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------DQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 341 l~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~------~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+.+.+.. ..+++.+|.++..+|++++|+..+++++++.+. ...+...++.++...++..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 149 (164)
T 3ro3_A 76 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAM 149 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHH
Confidence 9885443 678999999999999999999999999987432 2456777788877777665543
No 144
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.18 E-value=2.7e-10 Score=103.57 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=114.9
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..++..|++++|+..|.+|+.+...... ...+....++.++|.+|..+|++++|+.++++++
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 154 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG--------KFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRAL 154 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC--------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34677899999999999999999999999998543210 0136778899999999999999999999999999
Q ss_pred hc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----------------------------------
Q psy793 342 LM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL----------------------------------- 378 (414)
Q Consensus 342 ~~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~----------------------------------- 378 (414)
++ .|....+++.+|.++..+|++++|+..|++++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T 3edt_B 155 EIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPY 234 (283)
T ss_dssp HHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC----
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHH
Confidence 99 77778899999999999999999999999999872
Q ss_pred --------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 379 --------------PNDQQILKEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 379 --------------P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
|....++..++.++...++..+..+ .+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~-~~~~a 278 (283)
T 3edt_B 235 GEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHT-LEDCA 278 (283)
T ss_dssp --------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHH-HHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 4445677888888888777766544 34443
No 145
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.18 E-value=2.6e-11 Score=115.45 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=103.4
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC--------
Q psy793 276 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN-------- 347 (414)
Q Consensus 276 ~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~-------- 347 (414)
..+++++|+..|.+++.. .+....++.++|.+++++++|++|+..|++|+.++|.+
T Consensus 125 ~L~~~~~A~~~~~~a~~~----------------~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~ 188 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEE----------------KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEA 188 (336)
T ss_dssp EEEEEECCCCGGGCCHHH----------------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHH
T ss_pred EEeecccccchhcCCHHH----------------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHH
Confidence 456777888888888888 88899999999999999999999999999999999998
Q ss_pred -------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 348 -------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 348 -------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
..+|+++|.|+..+|+|++|+..|+++++++|++..++..++.++..+++..+...
T Consensus 189 ~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~ 251 (336)
T 1p5q_A 189 QKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARA 251 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 69999999999999999999999999999999999999999999998888776543
No 146
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.18 E-value=1.1e-10 Score=90.18 Aligned_cols=85 Identities=16% Similarity=0.306 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKE 387 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~ 387 (414)
+|....+++++|.+|+++|+|++|+..++++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|. +......
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 46677899999999999999999999999999999999999999999999999999999999999999874 4555555
Q ss_pred HHHHHHH
Q psy793 388 IAFVRKQ 394 (414)
Q Consensus 388 l~~~~~~ 394 (414)
+..++..
T Consensus 83 l~~~l~~ 89 (100)
T 3ma5_A 83 LQDAKLK 89 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 147
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.16 E-value=9.6e-11 Score=119.35 Aligned_cols=111 Identities=17% Similarity=0.110 Sum_probs=87.5
Q ss_pred hcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy793 277 LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGR 356 (414)
Q Consensus 277 ~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 356 (414)
.|++++|+..|+++++. .|....++.++|.++..+|+|++|+..++++++++|++..+++.+|.
T Consensus 2 ~g~~~~A~~~~~~al~~----------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 65 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRH----------------RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGR 65 (568)
T ss_dssp -----------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 47899999999999998 77788999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 357 AQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 357 ~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
++..+|++++|+..|+++++++|++..++..++.++...++..+..+
T Consensus 66 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 112 (568)
T 2vsy_A 66 VRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAA 112 (568)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999998888766543
No 148
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.15 E-value=2e-10 Score=115.06 Aligned_cols=144 Identities=13% Similarity=0.095 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc----------cCCc-------HHHHHhhHHHHHHHHHHHH
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN----------QSQS-------KTQQKHFRSYYTAALLNMA 321 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~nla 321 (414)
.....+..+...|..++..|++++|+..|.+++...+... .... ........|....++.++|
T Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 317 (537)
T 3fp2_A 238 LRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRG 317 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHH
Confidence 3444567778888888888888888888888877632100 0000 1122233456678899999
Q ss_pred HHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 322 AVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 322 ~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
.++..++++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+.
T Consensus 318 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 318 QMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888877776654
Q ss_pred H
Q psy793 402 E 402 (414)
Q Consensus 402 ~ 402 (414)
.
T Consensus 398 ~ 398 (537)
T 3fp2_A 398 I 398 (537)
T ss_dssp H
T ss_pred H
Confidence 4
No 149
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.15 E-value=4.8e-10 Score=104.40 Aligned_cols=115 Identities=14% Similarity=0.163 Sum_probs=107.4
Q ss_pred HHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHH
Q psy793 273 EYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALF 352 (414)
Q Consensus 273 ~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~ 352 (414)
.+...|++++|+..|++++.. .|....++.++|.++.+++++++|+..++++++++|++..+++
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~~----------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 210 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALEM----------------NPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWN 210 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHHH----------------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHhh----------------CCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHH
Confidence 588999999999999999998 6667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 353 RRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 353 ~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+..+
T Consensus 211 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 261 (327)
T 3cv0_A 211 KLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAK 261 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999999999988877766543
No 150
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.15 E-value=4.3e-10 Score=108.38 Aligned_cols=132 Identities=14% Similarity=0.154 Sum_probs=109.9
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..++..|++++|+.+|.+|+++.+.... ..+....++.++|.+|..+|+|++|+.++++|+
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 211 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA---------YNIRLLQCHSLFATNFLDLKQYEDAISHFQKAY 211 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST---------THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc---------chHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45788999999999999999999999999999664431 135567889999999999999999999999999
Q ss_pred hcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hC-CCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALD-----LL-PNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 342 ~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~-----l~-P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
++.+.. ..+++++|.+|..+|++++|+..|+++++ .+ |....+...++.++..+++..+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 284 (383)
T 3ulq_A 212 SMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAH 284 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHH
Confidence 885433 35889999999999999999999999999 46 777888888888888777665543
No 151
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.13 E-value=3.8e-10 Score=105.03 Aligned_cols=99 Identities=12% Similarity=-0.003 Sum_probs=90.5
Q ss_pred HHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHH
Q psy793 273 EYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALF 352 (414)
Q Consensus 273 ~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~ 352 (414)
.+...|++++|+..|+++++. .|....+++++|.++.++|+|++|+..++++|+++|+++.+++
T Consensus 175 l~~~~~~~~eA~~~~~~~l~~----------------~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~ 238 (291)
T 3mkr_A 175 LAAGGEKLQDAYYIFQEMADK----------------CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLI 238 (291)
T ss_dssp HHHCTTHHHHHHHHHHHHHHH----------------SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHhCchHHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 344568999999999999998 6777889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHH-HHHHHHHHHhhCCCCHHHHHH
Q psy793 353 RRGRAQVSMNNFEQ-GLQDYEQALDLLPNDQQILKE 387 (414)
Q Consensus 353 ~~g~~~~~lg~~~~-A~~~~~~al~l~P~~~~~~~~ 387 (414)
++|.++..+|++++ |..+++++++++|+++.+...
T Consensus 239 ~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 239 NLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 99999999999976 568999999999999987653
No 152
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.13 E-value=3.2e-10 Score=92.03 Aligned_cols=93 Identities=16% Similarity=0.065 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.+.....+.++|.++++.++|++|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++
T Consensus 5 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 84 (137)
T 3q49_B 5 KSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLG 84 (137)
T ss_dssp -CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence 34457789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLE 402 (414)
Q Consensus 390 ~~~~~~~~~~~~~ 402 (414)
.++..+++..+..
T Consensus 85 ~~~~~~~~~~~A~ 97 (137)
T 3q49_B 85 QCQLEMESYDEAI 97 (137)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHHhhHHHHH
Confidence 9998888776654
No 153
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.13 E-value=4.6e-10 Score=104.27 Aligned_cols=107 Identities=8% Similarity=0.100 Sum_probs=93.7
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..|+..|+|++|+.+|++|+........ ..+....+++|+|.+|.++++|++|+.+++++++
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD---------NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc---------chhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4667899999999999999999999999998654421 2567788999999999999999999999999998
Q ss_pred cCCCC------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhC
Q psy793 343 MEPNN------VKALFRRGRAQVSMN-NFEQGLQDYEQALDLL 378 (414)
Q Consensus 343 ~~p~~------~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~ 378 (414)
+.+.. +.+|+++|.++..+| ++++|+..|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 86443 789999999999999 5799999999999864
No 154
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.12 E-value=5.4e-11 Score=91.22 Aligned_cols=68 Identities=19% Similarity=0.384 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q psy793 318 LNMAAVQLKFKAYKRAINLCDDILLMEPNNVK-ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 385 (414)
Q Consensus 318 ~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 385 (414)
+++|.++++.++|++|+..++++++++|+++. +++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 34555555556666666666666666555555 555666666666666666666666666666555554
No 155
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.11 E-value=6.5e-11 Score=117.52 Aligned_cols=112 Identities=13% Similarity=0.137 Sum_probs=103.4
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC--------
Q psy793 276 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN-------- 347 (414)
Q Consensus 276 ~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~-------- 347 (414)
..++|++|+..|.+++.. .+....++.++|.+++++++|++|+..|++||+++|.+
T Consensus 246 ~l~~~~~A~~~~~~~~~~----------------~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~ 309 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKE----------------KLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKES 309 (457)
T ss_dssp EEEEEECCCCGGGSCHHH----------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHH
T ss_pred hhhhcccCcchhhcCHHH----------------HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHH
Confidence 456778888888888888 78899999999999999999999999999999999998
Q ss_pred -------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 348 -------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 348 -------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
..+|+++|.||..+++|++|+.+|++|++++|++..++..++.++..+++..+..+
T Consensus 310 ~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~ 372 (457)
T 1kt0_A 310 KASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKG 372 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHH
Confidence 69999999999999999999999999999999999999999999998888776543
No 156
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.10 E-value=7.8e-10 Score=112.50 Aligned_cols=124 Identities=15% Similarity=0.133 Sum_probs=112.1
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..|++.|++++|+..|++++++ .|....+|.+++.+|.+.|++++|+..+++++++
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 436 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSSTM----------------DPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARL 436 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445677889999999999999999999987 6777789999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.|++..+++.+|.+|...|++++|+..|++++++.|.+..++..++.++...++..+..+
T Consensus 437 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 496 (597)
T 2xpi_A 437 FQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN 496 (597)
T ss_dssp TTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999888877766543
No 157
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.10 E-value=1.4e-09 Score=108.25 Aligned_cols=139 Identities=12% Similarity=0.047 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
+.+....+....+.+..+..+|+|++|+..|+++|++....-.. ..|.....+.|+|.+|..+|+|++|+.+
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~--------~Hp~~a~~~~nLa~~y~~~g~~~eA~~~ 373 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFAD--------TNLYVLRLLSIASEVLSYLQAYEEASHY 373 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCT--------TSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCC--------CCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 44556667778888888999999999999999999986433211 1477889999999999999999999999
Q ss_pred HHHHHhc-----C---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHH---HHHHHHHHHHHHHHHHH
Q psy793 337 CDDILLM-----E---PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQQ---ILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 337 ~~~al~~-----~---p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l-----~P~~~~---~~~~l~~~~~~~~~~~~ 400 (414)
++++|++ . |+-+..+.++|.+|..+|+|++|+..|++|+++ -|+++. +...+..++..++.+++
T Consensus 374 ~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ 453 (490)
T 3n71_A 374 ARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQ 453 (490)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 9999976 2 444578999999999999999999999999985 477754 44567777777777666
Q ss_pred HHH
Q psy793 401 LEK 403 (414)
Q Consensus 401 ~~k 403 (414)
.+.
T Consensus 454 ae~ 456 (490)
T 3n71_A 454 NEF 456 (490)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.10 E-value=5e-10 Score=83.87 Aligned_cols=84 Identities=26% Similarity=0.353 Sum_probs=78.1
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..++|++|+..|++++++ .|....++.++|.++.+++++++|+..++++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL----------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc----------------CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3667889999999999999999999999998 666778999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcC
Q psy793 343 MEPNNVKALFRRGRAQVSMN 362 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg 362 (414)
++|++..+++.+|.++..+|
T Consensus 72 ~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 72 LDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999998764
No 159
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=9e-10 Score=101.74 Aligned_cols=133 Identities=18% Similarity=0.154 Sum_probs=113.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|++++|+..|.+++.+...... ...+....++.++|.++..++++++|+.++++++.
T Consensus 110 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~--------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~ 181 (311)
T 3nf1_A 110 VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG--------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALE 181 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC--------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4667889999999999999999999999998432200 01367788999999999999999999999999999
Q ss_pred c--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------------------------------------
Q psy793 343 M--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------------------------------------- 377 (414)
Q Consensus 343 ~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l------------------------------------- 377 (414)
+ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (311)
T 3nf1_A 182 IYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFG 261 (311)
T ss_dssp HHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSC
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHH
Confidence 8 6777889999999999999999999999999985
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 378 ------------LPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 378 ------------~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.|.+..++..++.++...++..+..+
T Consensus 262 ~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 299 (311)
T 3nf1_A 262 EYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAET 299 (311)
T ss_dssp CCC---------CHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHH
Confidence 45667788889999888888766544
No 160
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=8.1e-10 Score=102.08 Aligned_cols=133 Identities=21% Similarity=0.170 Sum_probs=113.6
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|++++|+..|.+++.+...... ...+....++.++|.+|..++++++|+..++++++
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~--------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~ 139 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG--------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALE 139 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC--------CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 4667888999999999999999999999998543200 11367788999999999999999999999999998
Q ss_pred cC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 343 ME--------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--------LPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 343 ~~--------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+. |....+++.+|.++..+|++++|+..|++++++ .|....++..++.++...++..+..+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 216 (311)
T 3nf1_A 140 IREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET 216 (311)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 84 566789999999999999999999999999998 77778888999999988887766543
No 161
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.08 E-value=8.4e-10 Score=109.68 Aligned_cols=113 Identities=16% Similarity=0.261 Sum_probs=98.6
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHH------HHHHHHHHHHHHH---hhCHHHHHHH
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY------TAALLNMAAVQLK---FKAYKRAINL 336 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~------~~~~~nla~~~~~---l~~~~~A~~~ 336 (414)
.+...|..+++.|++++|+..|.+++.. .|.. ..++.++|.++.. +|++++|+..
T Consensus 374 ~~~~la~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~ 437 (514)
T 2gw1_A 374 VPNFFAEILTDKNDFDKALKQYDLAIEL----------------ENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNL 437 (514)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------HHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHh----------------hhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHH
Confidence 4566777888888888888888888877 3433 3389999999999 9999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
+++++.++|++..+++.+|.++..+|++++|+..|+++++++|++..++..+..+...
T Consensus 438 ~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 495 (514)
T 2gw1_A 438 LEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAA 495 (514)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998877666543
No 162
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.07 E-value=6.1e-10 Score=104.27 Aligned_cols=68 Identities=7% Similarity=0.039 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 382 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~ 382 (414)
..++.++|.+|.++|+|++|+.++++++.+.|.+ ..+++.+|.++..+|++++|+..|++++ ++|...
T Consensus 155 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 155 AELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 4566666666666666666666666666654432 2355666666666666666666666666 666664
No 163
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.07 E-value=4.3e-10 Score=97.99 Aligned_cols=114 Identities=8% Similarity=0.006 Sum_probs=94.6
Q ss_pred HhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCH-----
Q psy793 274 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV----- 348 (414)
Q Consensus 274 ~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~----- 348 (414)
.-..+.|+.|.+.|...... .+.....+.++|.++++.++|++|+..+++++.+.|.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 77 (198)
T 2fbn_A 14 RENLYFQGAKKSIYDYTDEE----------------KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQ 77 (198)
T ss_dssp --------CCCSGGGCCHHH----------------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCH
T ss_pred hhhhhhccccCchhhCCHHH----------------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchh
Confidence 33446666666666655544 566778899999999999999999999999999999887
Q ss_pred -----------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 349 -----------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 349 -----------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.+++++|.++..+|+|++|+.+|+++++++|++..++..++.++..+++..+..+
T Consensus 78 ~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~ 143 (198)
T 2fbn_A 78 ILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKE 143 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHH
Confidence 8999999999999999999999999999999999999999999998888766543
No 164
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.07 E-value=5.4e-10 Score=103.77 Aligned_cols=125 Identities=14% Similarity=0.043 Sum_probs=102.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..++|++|+.+|++|+.+..... . ......++.++|.+|..+|+|++|+.++++++++
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~---~-------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~ 184 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI---D-------VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS---C-------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc---c-------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45566789999999999999999999998522111 0 1234568999999999999999999999999953
Q ss_pred -------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHH
Q psy793 344 -------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHH 398 (414)
Q Consensus 344 -------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~ 398 (414)
.+....+++++|.+|..+|+|++|+..+++++++.+.. ..++..++.++..+++.
T Consensus 185 ~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~ 252 (293)
T 3u3w_A 185 LEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYE 252 (293)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCC
T ss_pred HHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCc
Confidence 23345689999999999999999999999999987544 78899999999988843
No 165
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.06 E-value=2.8e-09 Score=102.51 Aligned_cols=108 Identities=15% Similarity=0.116 Sum_probs=97.0
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..+...|+|++|+.+|.+|+++.+... .......++.|+|.+|..+|++++|+.++++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 249 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ----------NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAA 249 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC----------CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4577888999999999999999999999999864332 134567899999999999999999999999999
Q ss_pred h-----cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy793 342 L-----MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP 379 (414)
Q Consensus 342 ~-----~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 379 (414)
. .+|..+.+++.+|.++..+|++++|+..+++++++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 250 KVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9 7888899999999999999999999999999999854
No 166
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.06 E-value=2.3e-09 Score=103.18 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=95.9
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..+...|+|++|+.+|.+|+++.+... ..+....++.|+|.+|..+|++++|+.++++++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 251 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK----------QPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAI 251 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC----------ChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4567889999999999999999999999999965432 145667899999999999999999999999999
Q ss_pred h-----cC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 342 L-----ME-PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 342 ~-----~~-p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
+ .+ |..+.+++.+|.++..+|++++|+..|++++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 294 (383)
T 3ulq_A 252 AVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYS 294 (383)
T ss_dssp HHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 9 46 7788999999999999999999999999999984
No 167
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.05 E-value=1.4e-09 Score=83.10 Aligned_cols=70 Identities=13% Similarity=0.099 Sum_probs=60.2
Q ss_pred HHHhhHHHHHH-HHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy793 305 QQKHFRSYYTA-ALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 382 (414)
Q Consensus 305 ~~~~~~~~~~~-~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~ 382 (414)
......|.... +++++|.+|..++++++|+.+++++++++|++..++++ +.+.+|+..|+++...+|++.
T Consensus 25 ~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 25 EFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp HHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCCS
T ss_pred HHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCcccc
Confidence 34445566778 99999999999999999999999999999999998865 677889999999988888763
No 168
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.05 E-value=8.1e-10 Score=92.90 Aligned_cols=92 Identities=16% Similarity=0.137 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM------------------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQ 373 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~------------------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~ 373 (414)
..+..+.++|..+++.|+|++|+..|+++|.+ +|.+..+|+++|.||..+|+|++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 45678899999999999999999999999999 777889999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 374 ALDLLPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 374 al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+++++|++..++..++.++..+++..+...
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~ 118 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEE 118 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHH
Confidence 999999999999999999999888877654
No 169
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.05 E-value=1.6e-09 Score=104.29 Aligned_cols=133 Identities=10% Similarity=0.080 Sum_probs=113.8
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
...+..+...|..++..|++..|+.+|.+|+++.+.... ..+....++.++|.+|..+|+|++|+.++++|
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~a 208 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPL---------YSIRTIQSLFVIAGNYDDFKHYDKALPHLEAA 208 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTT---------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCC---------chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 345788999999999999999999999999998654331 13456789999999999999999999999999
Q ss_pred HhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 341 LLMEP------NNVKALFRRGRAQVSMNNFEQGLQDYEQALD-----LLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 341 l~~~p------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~-----l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+++.+ ....+++++|.+|..+|++++|+..|+++++ .+|....+...++.++..+++..+..
T Consensus 209 l~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 281 (378)
T 3q15_A 209 LELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAF 281 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHH
Confidence 98743 1346899999999999999999999999999 77888889999999998888776654
No 170
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.05 E-value=1.6e-09 Score=93.81 Aligned_cols=130 Identities=13% Similarity=0.134 Sum_probs=106.5
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|.+|+.+..... ..+....++.++|.++..+|++++|+.++++++.
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 94 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSG----------DHTAEHRALHQVGMVERMAGNWDAARRCFLEERE 94 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcC----------CcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 367788999999999999999999999999865432 1567788999999999999999999999999998
Q ss_pred c---CC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCH----HHHHHHHHHHHHHHHHHHHH
Q psy793 343 M---EP----NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLP--NDQ----QILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 343 ~---~p----~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P--~~~----~~~~~l~~~~~~~~~~~~~~ 402 (414)
+ .+ ....+++.+|.++..+|++++|+..+++++++.+ ++. .+...++.++...++..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 167 (203)
T 3gw4_A 95 LLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQ 167 (203)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 8 34 2356799999999999999999999999998743 222 33467777777766665543
No 171
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.04 E-value=1.6e-09 Score=110.24 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=97.6
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------Cc-------HHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------QS-------KTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
...+...|..+.+.|++++|+..|++++...+..... .. ..+.....|....+|.+++.+|.
T Consensus 407 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 407 GPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4567778888888888888888888877653211100 00 01111123344567888888888
Q ss_pred HhhCHHHHHHHHHHHHhc------CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q psy793 326 KFKAYKRAINLCDDILLM------EPNN-VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHH 398 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~------~p~~-~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 398 (414)
+.|++++|+..+++++++ +|++ ..+|+.+|.++..+|++++|+..|+++++++|++..++..++.++...++.
T Consensus 487 ~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~ 566 (597)
T 2xpi_A 487 NKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIP 566 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCH
T ss_pred HhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCH
Confidence 888888888888888877 5554 677888888888888888888888888888888888888888887777766
Q ss_pred HHHH
Q psy793 399 LNLE 402 (414)
Q Consensus 399 ~~~~ 402 (414)
.+..
T Consensus 567 ~~A~ 570 (597)
T 2xpi_A 567 GLAI 570 (597)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 172
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.04 E-value=5.4e-10 Score=92.17 Aligned_cols=104 Identities=14% Similarity=0.218 Sum_probs=89.2
Q ss_pred cCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh---CHHHHHHHHHHHHhcC-C-CCHHHHH
Q psy793 278 NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK---AYKRAINLCDDILLME-P-NNVKALF 352 (414)
Q Consensus 278 ~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~---~~~~A~~~~~~al~~~-p-~~~~a~~ 352 (414)
.....+.+.|.+++.. .+....+.+++|+|+.+.+ +.++++..++.+++.+ | ++..++|
T Consensus 12 ~~l~~~~~~y~~e~~~----------------~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY 75 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAA----------------GSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVF 75 (152)
T ss_dssp HHHHHHHHHHHHHHHT----------------TCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcc----------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHH
Confidence 3445566677777654 4556788999999999988 7889999999999998 7 5789999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 353 RRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 353 ~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
.+|.+++++++|++|+++++++++++|+|..+......+..++.+
T Consensus 76 ~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 76 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888776643
No 173
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.04 E-value=1.5e-10 Score=89.76 Aligned_cols=92 Identities=13% Similarity=0.302 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKEIA 389 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~l~ 389 (414)
....++.++|.++...+++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|+ +..++..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 345678899999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHHH-HHHHHHHH
Q psy793 390 FVRKQM-RHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~-~~~~~~~k 403 (414)
.++..+ ++..+..+
T Consensus 84 ~~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 84 DALRYIEGKEVEAEI 98 (112)
T ss_dssp HHHTTCSSCSHHHHH
T ss_pred HHHHHHhCCHHHHHH
Confidence 999888 76655443
No 174
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.03 E-value=2.6e-09 Score=99.97 Aligned_cols=131 Identities=12% Similarity=0.098 Sum_probs=108.5
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
...+..+.+.|+.+.+.|+|++|+.+|++|+.+...... ......++.++|.+|.. +++++|+.++++|
T Consensus 73 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~----------~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~A 141 (307)
T 2ifu_A 73 FHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGT----------PDTAAMALDRAGKLMEP-LDLSKAVHLYQQA 141 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTC----------HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHH
Confidence 366888999999999999999999999999999876661 23457889999999999 9999999999999
Q ss_pred HhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHHHHHHHHH
Q psy793 341 LLMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ------QILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 341 l~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~------~~~~~l~~~~~~~~~~~~~~ 402 (414)
+.+.+.. ..++.++|.++..+|+|++|+..|++++++.|.+. .+...+..++..+++..+..
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~ 215 (307)
T 2ifu_A 142 AAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQ 215 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9987643 68899999999999999999999999999876542 34555556665555554443
No 175
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.03 E-value=1.4e-09 Score=87.21 Aligned_cols=94 Identities=15% Similarity=0.171 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.+.....+.++|.++...++|++|+..++++++.+|.+..+++.+|.++..++++++|+..|+++++++|++..++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++..+++..+..+
T Consensus 92 ~~~~~~~~~~~A~~ 105 (133)
T 2lni_A 92 AALEAMKDYTKAMD 105 (133)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHHhhHHHHHH
Confidence 99988877766543
No 176
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.02 E-value=1.5e-09 Score=90.64 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=87.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|.+++.+ .|....++.++|.++..+|++++|+..+++++++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~----------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIEL----------------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 455788999999999999999999999998 6777889999999999999999999999999999
Q ss_pred CCCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 344 EPNNVKALFR--RGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 344 ~p~~~~a~~~--~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
+|.+..++.. ++..+..+|++++|+..++++..+
T Consensus 111 ~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 111 KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999988855 455588899999999999988765
No 177
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=3.5e-09 Score=82.60 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
+..+.++|.++...++|++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|++..++..++.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 83 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALE 83 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH
Q psy793 394 QMRHHLNLEK 403 (414)
Q Consensus 394 ~~~~~~~~~k 403 (414)
..++..+..+
T Consensus 84 ~~~~~~~A~~ 93 (118)
T 1elw_A 84 FLNRFEEAKR 93 (118)
T ss_dssp HTTCHHHHHH
T ss_pred HHhhHHHHHH
Confidence 8877666543
No 178
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=2e-09 Score=99.86 Aligned_cols=129 Identities=12% Similarity=0.013 Sum_probs=103.6
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH-
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL- 341 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al- 341 (414)
.+..+...|..+...|+|++|+.+|.+|+.+...... ......++.++|.+|..+++|++|+.++++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~ 183 (293)
T 2qfc_A 114 FLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGID----------VYQNLYIENAIANIYAENGYLKKGIDLFEQILK 183 (293)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSC----------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCc----------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455667888999999999999999999976322110 12346789999999999999999999999999
Q ss_pred --hcCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHHHHHHHHHH
Q psy793 342 --LMEPNNV----KALFRRGRAQVSMNNFEQGLQDYEQALDLLPN------DQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 342 --~~~p~~~----~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~------~~~~~~~l~~~~~~~~~~~~~ 401 (414)
+..|++. .+++++|.+|..+|+|++|+..|++++++.+. -..+...++.++..+++..+.
T Consensus 184 ~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 184 QLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 4455532 69999999999999999999999999998643 167788888888887766554
No 179
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.02 E-value=1.2e-09 Score=105.58 Aligned_cols=125 Identities=12% Similarity=0.119 Sum_probs=109.3
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
...+..+...|..++..|+|++|+..|++++++.+. . ......++.++|.+|..+|++++|+.+++++
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~-----------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 112 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-D-----------LRTLSAIYSQLGNAYFYLGDYNKAMQYHKHD 112 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-C-----------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-C-----------hhHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 355778889999999999999999999999998211 1 2334578999999999999999999999999
Q ss_pred Hhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHH
Q psy793 341 LLM------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 341 l~~------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~ 397 (414)
+++ +|....+++.+|.++..+|++++|+..|++++++ .|....++..++.++...++
T Consensus 113 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 113 LTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 988 5777899999999999999999999999999999 56667788899999988888
No 180
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.00 E-value=4.4e-09 Score=83.59 Aligned_cols=94 Identities=17% Similarity=0.282 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.+....++..+|.++...+++++|+..+++++..+|++..+++.+|.++..+|++++|+..|+++++++|++..++..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 87 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMG 87 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHH
Confidence 67788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy793 390 FVRKQMRHHLNLEK 403 (414)
Q Consensus 390 ~~~~~~~~~~~~~k 403 (414)
.++...++..+..+
T Consensus 88 ~~~~~~~~~~~A~~ 101 (131)
T 2vyi_A 88 LALSSLNKHVEAVA 101 (131)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHhCCHHHHHH
Confidence 99988877766543
No 181
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.00 E-value=2.1e-09 Score=99.74 Aligned_cols=107 Identities=9% Similarity=0.122 Sum_probs=90.8
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..|+..|+|++|+.+|++|+.+....... ......+++|+|.+|.++|+|++|+.+++++++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~---------~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDN---------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCcc---------ccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36788999999999999999999999999885543210 122347999999999999999999999999998
Q ss_pred cCCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhhC
Q psy793 343 MEPN------NVKALFRRGRAQVSMNNFEQG-LQDYEQALDLL 378 (414)
Q Consensus 343 ~~p~------~~~a~~~~g~~~~~lg~~~~A-~~~~~~al~l~ 378 (414)
+.+. .+.+|+++|.+|..+|++++| ...|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 8542 278999999999999999999 77899999764
No 182
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.99 E-value=5e-09 Score=100.56 Aligned_cols=130 Identities=13% Similarity=0.148 Sum_probs=108.4
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|+|++|+..|++++.+.+... ..+....++.++|.+|..+|++++|+.++++++.
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 255 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG----------DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLL 255 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcC----------CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 355678899999999999999999999999865433 1345567899999999999999999999999998
Q ss_pred cCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHH
Q psy793 343 MEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 343 ~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+.+.. ..+++.+|.++..+|++++|+..|++++++.+.. ..++..++.++...++..+..
T Consensus 256 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 327 (406)
T 3sf4_A 256 LARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM 327 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 87655 7789999999999999999999999999986543 567778888887777665543
No 183
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=1.9e-09 Score=100.81 Aligned_cols=119 Identities=3% Similarity=-0.063 Sum_probs=86.7
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHH-HHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTA-ALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
..+...|..+.+.|++++|...|++|+++ .|.... +|.+++.++.++|++++|+..+++|++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLAI----------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTS----------------SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhc----------------cccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 45677888888889999999999999986 333333 6777777777777788887777777777
Q ss_pred CCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVS-MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 399 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~-lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 399 (414)
+|.+..+|...+..... +|++++|+..|+++++++|++..++..++.++...++..
T Consensus 164 ~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 164 ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp TTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHH
T ss_pred CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 77777776655555433 577777777777777777777777777776665554443
No 184
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.99 E-value=4.1e-09 Score=84.37 Aligned_cols=89 Identities=20% Similarity=0.258 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV---KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND---QQILKEI 388 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~---~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~---~~~~~~l 388 (414)
..++++|.+++..|+|++|+..++++++.+|++. .+++.+|.++..+|++++|+..|+++++.+|++ ..++..+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 3568899999999999999999999999999998 899999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHHHHHHH
Q psy793 389 AFVRKQMRHHLNLEK 403 (414)
Q Consensus 389 ~~~~~~~~~~~~~~k 403 (414)
+.++..+++..+..+
T Consensus 83 a~~~~~~g~~~~A~~ 97 (129)
T 2xev_A 83 GLSQYGEGKNTEAQQ 97 (129)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHH
Confidence 999988877766543
No 185
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.97 E-value=7.4e-09 Score=85.39 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=92.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|++++|+..|++++.+.+... ..+....++.++|.++..++++++|+.++++++.
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~----------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 117 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK----------DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 117 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC----------CcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 356788899999999999999999999999865432 1344577899999999999999999999999997
Q ss_pred cCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q psy793 343 MEP------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN 380 (414)
Q Consensus 343 ~~p------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~ 380 (414)
+.+ ....+++.+|.++..+|++++|+..+++++++...
T Consensus 118 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 118 IAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 732 22568999999999999999999999999987543
No 186
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.97 E-value=7.3e-09 Score=94.62 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=60.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH----hhCHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINLCDD 339 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~A~~~~~~ 339 (414)
+..+...|..++..+++++|+..|++|++. ....+++++|.+|.. .+++++|+.++++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~------------------~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~ 67 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACDL------------------KENSGCFNLGVLYYQGQGVEKNLKKAASFYAK 67 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHC------------------CCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHH
Confidence 456777888888888888888888887752 112344455555555 5555555555555
Q ss_pred HHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 340 ILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 340 al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
+++++ ++.+++.+|.++.. .+++++|+..|+++++.+ +..+...++.++..
T Consensus 68 a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 68 ACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 55443 44455555555555 555555555555555442 44444444444443
No 187
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.96 E-value=7.2e-09 Score=105.39 Aligned_cols=116 Identities=9% Similarity=0.025 Sum_probs=108.8
Q ss_pred HHHHHHhhhHHhhhcC----------HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh--CHH
Q psy793 264 IRTIKNSGNEYFKLNR----------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK--AYK 331 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~----------~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~--~~~ 331 (414)
...+..++..+.+.++ +++|+..|.++++. +|....+|..+++++.+++ +|+
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~----------------~pK~y~aW~hR~w~l~~l~~~~~~ 126 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRV----------------NPKSYGTWHHRCWLLSRLPEPNWA 126 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTCSSCCHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcccccHH
Confidence 3456678888888888 99999999999998 8999999999999999999 779
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 332 RAINLCDDILLMEPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 332 ~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
+|+++|+++++++|.|..||+.++.++..++ .+++|++++.++++.+|.|..++..++.+...+
T Consensus 127 ~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 127 RELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 9999999999999999999999999999999 999999999999999999999999999998876
No 188
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.95 E-value=2.7e-09 Score=105.30 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=100.7
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh--CHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK--AYKRAINLCDDIL 341 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~--~~~~A~~~~~~al 341 (414)
+..+.+.|..|+..|+|++|+.+|++++.+.+...... .+....++.++|.++++++ +|++|+.++++|+
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal 165 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY--------RIESPELDCEEGWTRLKCGGNQNERAKVCFEKAL 165 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS--------CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc--------chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 45678899999999999999999999999855433110 1233567888888887764 6999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVS---MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~---lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
+++|+++.+++.+|.++.. .+++++|+..|+++++++|++..++..++.....+
T Consensus 166 ~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 166 EKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHC
T ss_pred HhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 9999999999999988654 46778899999999999999999888887665544
No 189
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.94 E-value=9.5e-09 Score=95.35 Aligned_cols=130 Identities=13% Similarity=0.154 Sum_probs=109.2
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|++++|+..|++++.+.+... ..+....++.++|.++..+|++++|+..+++++.+
T Consensus 183 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~----------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 183 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG----------DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT----------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC----------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999855432 13455679999999999999999999999999988
Q ss_pred CCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 EPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 344 ~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k 403 (414)
.+.. ..+++.+|.++..+|++++|+..|++++++.+.. ..++..++.++...++..+..+
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 324 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 324 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 7655 7789999999999999999999999999986543 4477788888888777666543
No 190
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.94 E-value=6.7e-09 Score=97.10 Aligned_cols=111 Identities=10% Similarity=0.118 Sum_probs=95.0
Q ss_pred HHHHHhhhHHh-------hhcCH-------HHHHHHHHHHHH-HHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC
Q psy793 265 RTIKNSGNEYF-------KLNRM-------HDAQRKYKKAVR-YIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA 329 (414)
Q Consensus 265 ~~~~~~G~~~~-------~~~~~-------~~A~~~y~~Al~-~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~ 329 (414)
..+...|..+. +.|++ ++|+..|++|++ + .|....+|.++|.++.++|+
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~----------------~p~~~~~~~~~~~~~~~~~~ 114 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL----------------LKKNMLLYFAYADYEESRMK 114 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT----------------TTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh----------------CcccHHHHHHHHHHHHhcCC
Confidence 34555565554 34664 999999999998 6 67778899999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 330 YKRAINLCDDILLMEPNNVK-ALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
+++|...|+++++++|.++. +|..+|.++..+|++++|+..|++|++++|.+..++...+.+
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 115 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALM 177 (308)
T ss_dssp HHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999999999999999987 999999999999999999999999999999887766544443
No 191
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.94 E-value=9.2e-09 Score=104.59 Aligned_cols=126 Identities=10% Similarity=0.040 Sum_probs=108.1
Q ss_pred HHhhhHHhhhcCH-HHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC----------HHHHHHH
Q psy793 268 KNSGNEYFKLNRM-HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA----------YKRAINL 336 (414)
Q Consensus 268 ~~~G~~~~~~~~~-~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~----------~~~A~~~ 336 (414)
........+.+.+ ++|+..|.++|.+ .|....+|+.++.++.++++ +++|+.+
T Consensus 32 ~~~~~~~~~~~~~~eeal~~~~~~l~~----------------nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~ 95 (567)
T 1dce_A 32 TQAVFQKRQAGELDESVLELTSQILGA----------------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGF 95 (567)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHH----------------CchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHH
Confidence 3334444555655 6889999999999 89999999999999999999 9999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVSMN--NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~lg--~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
++++|+.+|++..+|+.|+.++..++ +|++|++.+.++++++|.|..++...+.+...++...+.+-+.+.++
T Consensus 96 ~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~ 170 (567)
T 1dce_A 96 LESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSL 170 (567)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTT
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 99999999999999999999999999 78999999999999999999999999999888773334444444443
No 192
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=1.1e-08 Score=83.55 Aligned_cols=93 Identities=10% Similarity=0.083 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHH
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKE 387 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 387 (414)
+.....+..+|.+++..++|++|+..++++++++|++ ..+++.+|.++..++++++|+..|+++++++|++..++..
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 4456778899999999999999999999999999988 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy793 388 IAFVRKQMRHHLNLEK 403 (414)
Q Consensus 388 l~~~~~~~~~~~~~~k 403 (414)
++.++..+++..+..+
T Consensus 105 ~a~~~~~~~~~~~A~~ 120 (148)
T 2dba_A 105 RSQALEKLGRLDQAVL 120 (148)
T ss_dssp HHHHHHHHTCHHHHHH
T ss_pred HHHHHHHcCCHHHHHH
Confidence 9999998887766543
No 193
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.93 E-value=3.7e-09 Score=98.20 Aligned_cols=122 Identities=14% Similarity=0.144 Sum_probs=103.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|++|+..|+++++..+. . ......++.++|.++..+|++++|+..+++++.+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-D-----------LKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-C-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-c-----------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 567888999999999999999999999997211 1 2344678999999999999999999999999987
Q ss_pred ------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHHHH
Q psy793 344 ------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVRKQMRH 397 (414)
Q Consensus 344 ------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~ 397 (414)
.+....+++.+|.++..+|++++|+..|++++++.|.. ..+...++.++...++
T Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 73 ARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 45567899999999999999999999999999986643 3377888888887777
No 194
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.93 E-value=6.3e-10 Score=105.85 Aligned_cols=103 Identities=10% Similarity=0.017 Sum_probs=58.6
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.+.++|..+++.++|++|+.+|++||++ +|....+|+++|.+|..+++|++|+.+++++++++|
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTE----------------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 6788999999999999999999999999 788889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCCCCHHH
Q psy793 346 NNVKALFRRGRAQ-VSMNNFEQGLQDYEQALDLLPNDQQI 384 (414)
Q Consensus 346 ~~~~a~~~~g~~~-~~lg~~~~A~~~~~~al~l~P~~~~~ 384 (414)
++..++..++.+. ...+..+++...|++++...|+++..
T Consensus 296 ~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 296 DDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ----------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 9999999999984 45577889999999999999987643
No 195
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.92 E-value=6.7e-09 Score=99.68 Aligned_cols=130 Identities=17% Similarity=0.183 Sum_probs=110.1
Q ss_pred HHHHHHHhhhHHhhhcC--------------------HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHH
Q psy793 263 VIRTIKNSGNEYFKLNR--------------------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAA 322 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~--------------------~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~ 322 (414)
.+..+...|..++..|+ |++|+..|.+++.+..... ..+....++.++|.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~la~ 195 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALG----------DRAAQGRAFGNLGN 195 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc----------CcHHHHHHHHHHHH
Confidence 46678899999999999 9999999999999855432 24667789999999
Q ss_pred HHHHhhCHHHHHHHHHHHHhcCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHH
Q psy793 323 VQLKFKAYKRAINLCDDILLMEPNNV------KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAF 390 (414)
Q Consensus 323 ~~~~l~~~~~A~~~~~~al~~~p~~~------~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~ 390 (414)
+|..+|++++|+.++++++++.+... .+++.+|.++..+|++++|+..|++++++.|.. ..++..++.
T Consensus 196 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 275 (406)
T 3sf4_A 196 THYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGN 275 (406)
T ss_dssp HHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHH
Confidence 99999999999999999998866543 389999999999999999999999999987765 667778888
Q ss_pred HHHHHHHHHHHH
Q psy793 391 VRKQMRHHLNLE 402 (414)
Q Consensus 391 ~~~~~~~~~~~~ 402 (414)
++...++..+..
T Consensus 276 ~~~~~g~~~~A~ 287 (406)
T 3sf4_A 276 TYTLLQDYEKAI 287 (406)
T ss_dssp HHHHTTCHHHHH
T ss_pred HHHHhCcHHHHH
Confidence 887777665543
No 196
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.92 E-value=1.8e-08 Score=98.74 Aligned_cols=124 Identities=11% Similarity=0.086 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCD 338 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~ 338 (414)
+....+....+.+...-..|+|++|+..|+++|++....-.. ..|.....+.|+|.+|..+|+|++|+.+++
T Consensus 293 ~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~--------~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~ 364 (433)
T 3qww_A 293 DMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFED--------SNVYMLHMMYQAMGVCLYMQDWEGALKYGQ 364 (433)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCT--------TSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccCh--------hchHHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 333445555666666667789999999999999986433211 147778899999999999999999999999
Q ss_pred HHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHH
Q psy793 339 DILLM--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQQILKEIAF 390 (414)
Q Consensus 339 ~al~~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~~l~~ 390 (414)
++|++ .|+-+..++++|.+|..+|+|++|+..|++|+++ -|+++.+......
T Consensus 365 ~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 365 KIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 99976 3444678999999999999999999999999985 5888877665443
No 197
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.91 E-value=6e-09 Score=100.70 Aligned_cols=130 Identities=16% Similarity=0.173 Sum_probs=101.7
Q ss_pred HHHHHHHHhhhHHhhhcC-----------------HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNR-----------------MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ 324 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~-----------------~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~ 324 (414)
..+..+...|..+...|+ |++|+..|.+++++..... ..+....++.++|.+|
T Consensus 164 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~----------~~~~~~~~~~~la~~~ 233 (411)
T 4a1s_A 164 SEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLG----------DRGAQGRACGNLGNTY 233 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT----------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcC----------CHHHHHHHHHHHHHHH
Confidence 346678889999999999 9999999999998854332 1355667888899999
Q ss_pred HHhhCHHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHH
Q psy793 325 LKFKAYKRAINLCDDILLMEPNNVK------ALFRRGRAQVSMNNFEQGLQDYEQALDLLPND------QQILKEIAFVR 392 (414)
Q Consensus 325 ~~l~~~~~A~~~~~~al~~~p~~~~------a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~ 392 (414)
..+|++++|+.++++++++.+.... +++.+|.++..+|++++|+..|++++++.|.. ..++..++.++
T Consensus 234 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~ 313 (411)
T 4a1s_A 234 YLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTY 313 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999999999999998888664433 78888889999999999999999888887643 56667777777
Q ss_pred HHHHHHHHH
Q psy793 393 KQMRHHLNL 401 (414)
Q Consensus 393 ~~~~~~~~~ 401 (414)
...++..+.
T Consensus 314 ~~~g~~~~A 322 (411)
T 4a1s_A 314 TLLHEFNTA 322 (411)
T ss_dssp HHTTCHHHH
T ss_pred HHcCCHHHH
Confidence 666655544
No 198
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.91 E-value=4.2e-09 Score=97.33 Aligned_cols=90 Identities=16% Similarity=0.066 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
...+.++|.++++.|+|++|+..++++++++|+++.+++++|.++..+|++++|+.+|+++++++|++..++..++.++.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 83 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQL 83 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q psy793 394 QMRHHLNLEK 403 (414)
Q Consensus 394 ~~~~~~~~~k 403 (414)
.+++..+..+
T Consensus 84 ~~g~~~~A~~ 93 (281)
T 2c2l_A 84 EMESYDEAIA 93 (281)
T ss_dssp HTTCHHHHHH
T ss_pred HcCCHHHHHH
Confidence 8887776544
No 199
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.90 E-value=5.9e-10 Score=111.20 Aligned_cols=102 Identities=14% Similarity=0.219 Sum_probs=90.5
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+..+|..+++.|+|++|+..|++|+++ .|....+++++|.+|.+++++++|+.++++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~l----------------~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIEL----------------DKKYIKGYYRRAASNMALGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566788999999999999999999999998 7788899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCC
Q psy793 344 EPNNVKALFRRGRA--QVSMNNFEQGLQDYE-----------QALDLLPND 381 (414)
Q Consensus 344 ~p~~~~a~~~~g~~--~~~lg~~~~A~~~~~-----------~al~l~P~~ 381 (414)
+|++..++..++.+ +..+|++++|++.++ ++++++|+.
T Consensus 104 ~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 104 KPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp STTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999998 889999999999999 888888764
No 200
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.90 E-value=7.1e-09 Score=82.46 Aligned_cols=91 Identities=10% Similarity=0.103 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHH
Q psy793 313 YTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-------QQIL 385 (414)
Q Consensus 313 ~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~-------~~~~ 385 (414)
....+.++|.++...++|++|+..+++++.++|.++.+++.+|.++..+|++++|+..|++++++.|++ ..++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999999877 8889
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy793 386 KEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 386 ~~l~~~~~~~~~~~~~~k 403 (414)
..++.++...++..+..+
T Consensus 83 ~~la~~~~~~~~~~~A~~ 100 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIH 100 (131)
T ss_dssp HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhccHHHHHH
Confidence 999999888777665543
No 201
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.90 E-value=1.8e-08 Score=79.22 Aligned_cols=89 Identities=21% Similarity=0.340 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
..++.++|.++...+++++|+..+++++..+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHH
Q psy793 394 QMRHHLNLE 402 (414)
Q Consensus 394 ~~~~~~~~~ 402 (414)
..++..+..
T Consensus 89 ~~~~~~~A~ 97 (125)
T 1na0_A 89 KQGDYDEAI 97 (125)
T ss_dssp HTTCHHHHH
T ss_pred HhcCHHHHH
Confidence 877665543
No 202
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.90 E-value=1.8e-08 Score=91.93 Aligned_cols=108 Identities=14% Similarity=0.171 Sum_probs=66.9
Q ss_pred HHHHHhhhHHhh----hcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH----hhCHHHHHHH
Q psy793 265 RTIKNSGNEYFK----LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINL 336 (414)
Q Consensus 265 ~~~~~~G~~~~~----~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~A~~~ 336 (414)
..+...|..+.. .+++++|+..|++|++. . ...+++++|.+|.. .+++++|+.+
T Consensus 39 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~----------------~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~ 100 (273)
T 1ouv_A 39 SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL----------------N--YSNGCHLLGNLYYSGQGVSQNTNKALQY 100 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT----------------T--CHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHC----------------C--CHHHHHHHHHHHhCCCCcccCHHHHHHH
Confidence 456677888888 88888888888888765 1 34455566666666 6666666666
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
++++++.+ ++.+++.+|.+|.. .+++++|+..|+++++++ +..+...++.++..
T Consensus 101 ~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 101 YSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 66665552 55566666666665 566666666666666554 34455555555443
No 203
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=1e-08 Score=93.96 Aligned_cols=108 Identities=12% Similarity=0.019 Sum_probs=92.8
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHH-HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY-YTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+..|..+++.++|++|+.+|++++..- ++. ...+++++|.++..+|++++|+..+++++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~---------------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWP---------------DKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSP 201 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCS---------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccC---------------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 57889999999999999999998776540 122 34689999999999999999999999999655
Q ss_pred --CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 345 --PN-NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 345 --p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
|. ...+++++|.|+..+|+.++|...|++++..+|+ ..+...|.
T Consensus 202 ~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 202 AGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp TTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 55 6679999999999999999999999999999999 77776654
No 204
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=1.1e-08 Score=90.41 Aligned_cols=130 Identities=13% Similarity=0.024 Sum_probs=94.4
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHH---------hhccC---CcHHHHHh-----hHHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK---------WYNQS---QSKTQQKH-----FRSYYTAALLNMAAVQLK 326 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~---------~~~~~---~~~~~~~~-----~~~~~~~~~~nla~~~~~ 326 (414)
+..+...|..++..+++++|+..|++|++.-. .+... .+.++... ..+....+++++|.+|..
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~ 97 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVN 97 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHc
Confidence 45567777777777777777777777765310 00000 01111111 133456788899999988
Q ss_pred ----hhCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 327 ----FKAYKRAINLCDDILLMEP--NNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 327 ----l~~~~~A~~~~~~al~~~p--~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
.+++++|+.+++++++..+ .++.+++++|.+|.. .+++++|+..|++++++ |++..+...|+.++..
T Consensus 98 g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 98 RQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp GGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 8899999999999999887 358899999999998 88999999999999998 6777788888888764
No 205
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.86 E-value=8.3e-09 Score=96.40 Aligned_cols=126 Identities=6% Similarity=-0.056 Sum_probs=109.5
Q ss_pred HHHhhhHH----hhh---cCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHH--HHHHHH
Q psy793 267 IKNSGNEY----FKL---NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYK--RAINLC 337 (414)
Q Consensus 267 ~~~~G~~~----~~~---~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~--~A~~~~ 337 (414)
+..++..+ .+. +++++++..+.++++. +|....+|..++.++.+++.++ ++++++
T Consensus 106 W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~----------------~pkny~aW~~R~~vl~~l~~~~~~~EL~~~ 169 (306)
T 3dra_A 106 WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSS----------------DPKNHHVWSYRKWLVDTFDLHNDAKELSFV 169 (306)
T ss_dssp HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhcccChHHHHHHH
Confidence 44455555 444 7899999999999999 8999999999999999999999 999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy793 338 DDILLMEPNNVKALFRRGRAQVSMNN------FEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYAR 408 (414)
Q Consensus 338 ~~al~~~p~~~~a~~~~g~~~~~lg~------~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~ 408 (414)
+++|+.+|.|..||..++.++..++. ++++++.+++++.++|+|.+++..+..+....++..+.-+..+.+
T Consensus 170 ~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~~~~~~~~~~~ 246 (306)
T 3dra_A 170 DKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFSLQ 246 (306)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCCGGGGHHHHHT
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCChHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999999999999999988776544433333333
No 206
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.84 E-value=8.3e-09 Score=91.09 Aligned_cols=110 Identities=12% Similarity=0.106 Sum_probs=87.8
Q ss_pred hhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh----CHHHHHHHHHHHHhcCCC
Q psy793 271 GNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK----AYKRAINLCDDILLMEPN 346 (414)
Q Consensus 271 G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~----~~~~A~~~~~~al~~~p~ 346 (414)
...++..|..-.....+.+|+.++.... ......+++++|.+|.. + ++++|+.+++++++ +.
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~-----------~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g 83 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAA-----------AQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG 83 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH-----------HTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHH-----------HcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC
Confidence 3445555555555566777777765433 34457889999999998 7 89999999999965 56
Q ss_pred CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHH
Q psy793 347 NVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLP--NDQQILKEIAFVRKQ 394 (414)
Q Consensus 347 ~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P--~~~~~~~~l~~~~~~ 394 (414)
++.+++++|.+|.. .+++++|+..|+++++..| +++.+...|+.++..
T Consensus 84 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 84 SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 89999999999998 8999999999999999988 358899999998876
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.82 E-value=1.7e-08 Score=84.05 Aligned_cols=72 Identities=14% Similarity=0.257 Sum_probs=68.0
Q ss_pred HHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 325 LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNF----------EQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 325 ~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~----------~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
.+++.|++|+..++++++++|+++.+|+++|.++..++++ ++|+..|++|++++|++..++..++.++..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999875 599999999999999999999999999998
Q ss_pred HH
Q psy793 395 MR 396 (414)
Q Consensus 395 ~~ 396 (414)
++
T Consensus 93 lg 94 (158)
T 1zu2_A 93 FA 94 (158)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 208
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.80 E-value=1.5e-07 Score=88.47 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy793 280 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA--YKRAINLCDDILLMEPNNVKALFRRGRA 357 (414)
Q Consensus 280 ~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~--~~~A~~~~~~al~~~p~~~~a~~~~g~~ 357 (414)
+++++..+.+++.. +|....+|..++.++.+++. |++++.+|+++|+++|.|..||..++.+
T Consensus 90 l~~EL~~~~~~L~~----------------~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~v 153 (331)
T 3dss_A 90 VKAELGFLESCLRV----------------NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFV 153 (331)
T ss_dssp HHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 78899999999988 88999999999999999994 9999999999999999999999999999
Q ss_pred HHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 358 QVSMNN-FEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 358 ~~~lg~-~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
+..++. +++++.++.++++.+|.|..++..+..+...+
T Consensus 154 l~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 154 AAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 999999 69999999999999999999999999998877
No 209
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.80 E-value=3.8e-08 Score=91.93 Aligned_cols=117 Identities=10% Similarity=-0.021 Sum_probs=105.3
Q ss_pred HHHHHhhhHHhhhc--CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHH----HHh---hCHHHHHH
Q psy793 265 RTIKNSGNEYFKLN--RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ----LKF---KAYKRAIN 335 (414)
Q Consensus 265 ~~~~~~G~~~~~~~--~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~~l---~~~~~A~~ 335 (414)
..+..+|..+...+ ++++|+..+.++|.. .|....+|..++.++ ..+ +++++++.
T Consensus 68 taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~----------------nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 68 TIWIYRFNILKNLPNRNLYDELDWCEEIALD----------------NEKNYQIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHTCTTSCHHHHHHHHHHHHHH----------------CTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHcccccHHHHHHHHHHHHHH----------------CcccHHHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 34556788887777 888888888888888 788889999999999 777 78999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 336 LCDDILLMEPNNVKALFRRGRAQVSMNNFE--QGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 336 ~~~~al~~~p~~~~a~~~~g~~~~~lg~~~--~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
.|+++|+.+|.|..+|+.++.++..++.++ ++++.++++++.+|.|..++.....+...++.
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999 99999999999999999999999988877654
No 210
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.80 E-value=4.7e-08 Score=75.92 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLME-------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILK 386 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 386 (414)
+.-++.+|..+++.++|..|+..+++|++.. +..+..+..+|.|++.+|+++.|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 3456789999999999999999999999863 345788999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH
Q psy793 387 EIAFVRKQMR 396 (414)
Q Consensus 387 ~l~~~~~~~~ 396 (414)
++..+...+.
T Consensus 85 n~~~~~~~~~ 94 (104)
T 2v5f_A 85 NLKYFEYIMA 94 (104)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8886655443
No 211
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.79 E-value=1.9e-08 Score=85.74 Aligned_cols=113 Identities=10% Similarity=-0.070 Sum_probs=91.8
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHH---------------hhccC---CcHHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK---------------WYNQS---QSKTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~---------------~~~~~---~~~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
+..+...|..+...|++++|+..|++++...+ ..... ..........|....+++++|.++.
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~ 119 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYN 119 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 56788899999999999999999988765421 00000 0112233345677899999999999
Q ss_pred HhhCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 326 KFKAYKRAINLCDDILLMEPNN--VKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
.+|++++|+..++++++.+|+. ..+++.+|.++..+|++++|+..|++++.
T Consensus 120 ~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 120 QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999999999999999999976 56999999999999999999999999875
No 212
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.79 E-value=6.6e-08 Score=94.80 Aligned_cols=120 Identities=11% Similarity=0.055 Sum_probs=95.7
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...-..+.++|+|++|+..|+++|++....-. ...+.....+.|+|.+|..+|+|++|+.+++++|+
T Consensus 286 ~~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg--------~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 286 EVQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLP--------DINIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCC--------TTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCC--------ccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 3455556666778889999999999999976322111 11467889999999999999999999999999996
Q ss_pred c--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHH
Q psy793 343 M--------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL-----LPNDQQILKEIAF 390 (414)
Q Consensus 343 ~--------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~~l~~ 390 (414)
+ .|.-+..++++|.+|..+|++++|+..|++|+++ -|+++.....+..
T Consensus 358 i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~ 418 (429)
T 3qwp_A 358 PYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILL 418 (429)
T ss_dssp HHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHH
T ss_pred hHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHH
Confidence 6 2344578999999999999999999999999985 5777766654433
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.77 E-value=9.9e-08 Score=90.25 Aligned_cols=110 Identities=7% Similarity=-0.002 Sum_probs=101.3
Q ss_pred HhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHhcCCCCHHHHH
Q psy793 274 YFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK-AYKRAINLCDDILLMEPNNVKALF 352 (414)
Q Consensus 274 ~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-~~~~A~~~~~~al~~~p~~~~a~~ 352 (414)
..+....++|+..+.++|.+ +|....+|+.++.++..++ .+++++..++++|..+|++..+|+
T Consensus 64 ~~~~e~se~AL~lt~~~L~~----------------nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~ 127 (349)
T 3q7a_A 64 AAKEEKSERALELTEIIVRM----------------NPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWH 127 (349)
T ss_dssp HHTTCCSHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHh----------------CchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHH
Confidence 33444557899999999999 8999999999999999999 599999999999999999999999
Q ss_pred HHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q psy793 353 RRGRAQVSM-N-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHL 399 (414)
Q Consensus 353 ~~g~~~~~l-g-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 399 (414)
.|+.++..+ + +++++++.+.++++++|.|..++...+.+...++...
T Consensus 128 hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 128 HRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 999999998 8 9999999999999999999999999999998887665
No 214
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.76 E-value=8.2e-08 Score=82.85 Aligned_cols=109 Identities=16% Similarity=0.139 Sum_probs=91.4
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..+...|++++|+..|.+|+++....... ......++.++|.++..+|++++|+..+++++
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 134 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED---------PLAASANAYEVATVALHFGDLAGARQEYEKSL 134 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC---------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc---------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 346778899999999999999999999999996533310 23567889999999999999999999999999
Q ss_pred hcCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q psy793 342 LMEP--NN----VKALFRRGRAQVSMNNFEQGLQDYEQALDLLP 379 (414)
Q Consensus 342 ~~~p--~~----~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P 379 (414)
.+.+ .+ ..++..+|.++..+|++++|+..+++++++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 135 VYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 7632 12 34578999999999999999999999998753
No 215
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.76 E-value=2.8e-08 Score=95.62 Aligned_cols=90 Identities=16% Similarity=0.269 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHh----------------cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILL----------------MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~----------------~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
...+.++|.++++.++|++|+..|++||+ ++|.+..+|+++|.+|..+++|++|+.+|++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 45688999999999999999999999998 78888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHH
Q psy793 378 LPNDQQILKEIAFVRKQMRHHLNLEK 403 (414)
Q Consensus 378 ~P~~~~~~~~l~~~~~~~~~~~~~~k 403 (414)
+|++..++..++.++..+++..+..+
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~eA~~ 328 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQALA 328 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHHHHH
Confidence 99999999999999998888776543
No 216
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.76 E-value=2.1e-08 Score=79.31 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=69.4
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+...|..++..|+|++|+..|++++++ .|....++.++|.|+.++|++++|+..+++++
T Consensus 25 ~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~----------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 88 (117)
T 3k9i_A 25 DLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ----------------FPNHQALRVFYAMVLYNLGRYEQGVELLLKII 88 (117)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44678999999999999999999999999999 78888999999999999999999999999999
Q ss_pred hcCCCCHHHHH
Q psy793 342 LMEPNNVKALF 352 (414)
Q Consensus 342 ~~~p~~~~a~~ 352 (414)
...|+++....
T Consensus 89 ~~~p~~~~~~~ 99 (117)
T 3k9i_A 89 AETSDDETIQS 99 (117)
T ss_dssp HHHCCCHHHHH
T ss_pred HhCCCcHHHHH
Confidence 99999987643
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.73 E-value=7.4e-08 Score=74.80 Aligned_cols=83 Identities=11% Similarity=0.030 Sum_probs=71.5
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..++..|..+++.++|..|+..|++|+...+.... .......++.++|.|+.++|++++|+..+++++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~---------~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEI---------STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCC---------CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 456889999999999999999999999998543210 02345688999999999999999999999999999
Q ss_pred CCCCHHHHHHHH
Q psy793 344 EPNNVKALFRRG 355 (414)
Q Consensus 344 ~p~~~~a~~~~g 355 (414)
+|++..++.+++
T Consensus 76 ~P~~~~~~~n~~ 87 (104)
T 2v5f_A 76 DPEHQRANGNLK 87 (104)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHhhHH
Confidence 999999988887
No 218
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.73 E-value=3.4e-08 Score=90.53 Aligned_cols=126 Identities=13% Similarity=-0.027 Sum_probs=106.2
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.....+..+...|+|++|.+.|..++.. .|... +++.+|.++++.++|++|+..+++++...+
T Consensus 104 l~LayA~~L~~~g~y~eA~~~l~~~~~~----------------~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d 166 (282)
T 4f3v_A 104 ITMGFAACEAAQGNYADAMEALEAAPVA----------------GSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPD 166 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTSSCCT----------------TCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc----------------CCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCC
Confidence 3667788999999999999999888875 67777 899999999999999999999999887643
Q ss_pred CC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 346 NN--VKALFRRGRAQVSMNNFEQGLQDYEQALDLL--PN-DQQILKEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 346 ~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~--P~-~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
+. ..+++.+|.++..+|++++|+..|++++.-. |. ...++..++.++..+++..+... .+.++
T Consensus 167 ~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~-~l~~a 234 (282)
T 4f3v_A 167 KFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVA-LLEWL 234 (282)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHH-HHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Confidence 22 4589999999999999999999999999655 66 66799999999999998866544 44443
No 219
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.70 E-value=3.7e-07 Score=87.12 Aligned_cols=129 Identities=9% Similarity=0.021 Sum_probs=98.1
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+...|..++..|++++|+..|.+|+.+.+.... ......++.++|.++..+|++++|+..+++++.
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~ 121 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDV----------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQ 121 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCc----------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3556778899999999999999999999988554320 223456678899999999999999999999987
Q ss_pred cC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHHHHHHH
Q psy793 343 ME--------PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND-----QQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 343 ~~--------p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~-----~~~~~~l~~~~~~~~~~~~~ 401 (414)
+. |....++..+|.++..+|++++|...+++++++.|.. ..+...++.++...++..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 122 LINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 64 3345677888999999999999999999999887652 34566667766666655444
No 220
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.70 E-value=1.2e-07 Score=89.11 Aligned_cols=108 Identities=10% Similarity=0.077 Sum_probs=98.9
Q ss_pred HhhhcCHH-HHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC----------HHHHHHHHHHHHh
Q psy793 274 YFKLNRMH-DAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA----------YKRAINLCDDILL 342 (414)
Q Consensus 274 ~~~~~~~~-~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~----------~~~A~~~~~~al~ 342 (414)
..+.|.|. +|+..+.++|.+ +|....+|+.++.++..++. +++++..++.+|.
T Consensus 39 ~~~~~e~s~eaL~~t~~~L~~----------------nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~ 102 (331)
T 3dss_A 39 KRQAGELDESVLELTSQILGA----------------NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 102 (331)
T ss_dssp HHHTTCCSHHHHHHHHHHHTT----------------CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHH----------------CchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH
Confidence 34567775 899999999998 89999999999999998887 7999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMN--NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg--~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
.+|.+..+|+.++.++..++ .+++++..+.++++++|.|..++...+.+...++.
T Consensus 103 ~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 103 VNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAV 159 (331)
T ss_dssp HCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred hCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc
Confidence 99999999999999999999 49999999999999999999999999999887765
No 221
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=6.3e-08 Score=73.57 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHhhC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 311 SYYTAALLNMAAVQLKFKA---YKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
|....++..+|.+++..++ .++|...+++||+++|+++.+++.+|..++..|+|++|+..|+++++.+|.++.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 4456788899999976666 799999999999999999999999999999999999999999999999998544
No 222
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.67 E-value=4.5e-08 Score=75.23 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=68.2
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..+++.|+|++|+..|++++++ .|....+|+++|.||.++|++++|+..+++++++
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVET----------------DPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 567889999999999999999999999999 7888889999999999999999999999999998
Q ss_pred CCCC--HHHHHHHHHHHHH
Q psy793 344 EPNN--VKALFRRGRAQVS 360 (414)
Q Consensus 344 ~p~~--~~a~~~~g~~~~~ 360 (414)
.|.+ ..+...+...+..
T Consensus 71 ~~~~~~~~~~~~l~~~l~~ 89 (100)
T 3ma5_A 71 AREEGTQKDLSELQDAKLK 89 (100)
T ss_dssp HHHHSCHHHHHHHHHHHHH
T ss_pred hhcCCchhHHHHHHHHHHH
Confidence 7643 3333344444433
No 223
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.65 E-value=1.8e-07 Score=74.30 Aligned_cols=104 Identities=13% Similarity=0.193 Sum_probs=86.2
Q ss_pred cCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHH---HHHHHHHHHhcC-C-CCHHHHH
Q psy793 278 NRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKR---AINLCDDILLME-P-NNVKALF 352 (414)
Q Consensus 278 ~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~---A~~~~~~al~~~-p-~~~~a~~ 352 (414)
.....+...|.+++.. .+....+.+++|+|+.+..+... ++..++..+..+ | ..-.++|
T Consensus 15 ~~l~~~~~~y~~e~~~----------------~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY 78 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAA----------------GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVF 78 (126)
T ss_dssp HHHHHHHHHHHHHHHH----------------SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcc----------------CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 3445556667666654 34456788999999999887666 999999999887 5 5678999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 353 RRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 353 ~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
.+|.+++++|+|++|+.+++.+|+.+|+|..+......+..++.+
T Consensus 79 ~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 79 YLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999988888776654
No 224
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.64 E-value=1e-07 Score=90.09 Aligned_cols=117 Identities=10% Similarity=-0.020 Sum_probs=107.7
Q ss_pred HHHHHhhhHHhhhc-CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHh-h-CHHHHHHHHHHHH
Q psy793 265 RTIKNSGNEYFKLN-RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKF-K-AYKRAINLCDDIL 341 (414)
Q Consensus 265 ~~~~~~G~~~~~~~-~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-~-~~~~A~~~~~~al 341 (414)
..+..++..+...+ .+++++..+.++|.. .|....+|..++.++..+ + ++++++..|+++|
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~~----------------nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L 152 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAVQ----------------NLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSL 152 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHT----------------TCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHh----------------CCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Confidence 44666888888888 599999999999998 888999999999999999 8 9999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFE--------QGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~--------~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
+++|.|..||+.++.++..++.++ ++++.++++++.+|.|..++.....+...+..
T Consensus 153 ~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 153 LPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp SSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 999999999999999999999888 99999999999999999999999999876653
No 225
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.61 E-value=8.9e-08 Score=88.61 Aligned_cols=113 Identities=13% Similarity=-0.039 Sum_probs=90.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHH---------------hhccC---CcHHHHHhhHHHHHHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK---------------WYNQS---QSKTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~---------------~~~~~---~~~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
+..+...|..+...|++++|+..|++++...+ ..... ....+.....|....+++++|.++.
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~ 230 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLH 230 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHH
Confidence 45677788888888888888888777654211 00000 0122333447888899999999999
Q ss_pred HhhCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 326 KFKAYKRAINLCDDILLMEPNN--VKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
.+|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|...|++++.
T Consensus 231 ~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 231 QVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999998 89999999999999999999999999875
No 226
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.59 E-value=4e-07 Score=74.49 Aligned_cols=98 Identities=12% Similarity=0.027 Sum_probs=84.0
Q ss_pred hhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH----hhCHHHHHHHHHHHHhcCC
Q psy793 270 SGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 270 ~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~A~~~~~~al~~~p 345 (414)
.|..|...+.+++|+..|++|.+. ....+++++|.+|.. .+++++|+.++++|.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~------------------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-- 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL------------------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-- 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC------------------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--
Confidence 677788888889999999999865 346788999999999 89999999999999987
Q ss_pred CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 346 NNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 346 ~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.++.+++++|.+|.. .+++++|+..|++|.+.. ++.+...|+
T Consensus 91 g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 91 NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 689999999999999 899999999999999984 566655554
No 227
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.58 E-value=2.3e-07 Score=93.42 Aligned_cols=129 Identities=5% Similarity=-0.007 Sum_probs=96.0
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHH-HHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYY-TAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~-~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
+..+...|..+.+.|++++|...|++++++ .|.. ..+|.+++.++.+++++++|+..+++|++
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~----------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAI----------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS----------------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCc----------------cccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 345667888888999999999999999987 3332 24788888888888888888888888888
Q ss_pred cCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 343 MEPNNVKALFRRGRA-QVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~-~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
..|.....+...+.. +..+|++++|...|+++++..|++..++..+..+....++..+ .+..|.+.
T Consensus 385 ~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~-Ar~~~~~a 451 (530)
T 2ooe_A 385 DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNN-TRVLFERV 451 (530)
T ss_dssp CTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHH-HHHHHHHH
T ss_pred ccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhh-HHHHHHHH
Confidence 888777777766655 3457888888888888888888888888777777665544332 33344433
No 228
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.58 E-value=3.7e-07 Score=87.05 Aligned_cols=136 Identities=12% Similarity=0.005 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
.....-.+..+...|..++..|++++|+..+.+++...+... ......++.++|.++...|++++|+..
T Consensus 7 ~~~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~l~~~~~~~g~~~~A~~~ 75 (373)
T 1hz4_A 7 IREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGW-----------FYSRIVATSVLGEVLHCKGELTRSLAL 75 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTC-----------HHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCc-----------hhHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 344445567788899999999999999999999998743211 234566889999999999999999999
Q ss_pred HHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 337 CDDILLMEPNN------VKALFRRGRAQVSMNNFEQGLQDYEQALDLL--------PNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 337 ~~~al~~~p~~------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~--------P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+++++.+.+.. ..+++.+|.++..+|++++|+..|++++++. |....+...++.++...++..+..
T Consensus 76 ~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 155 (373)
T 1hz4_A 76 MQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAE 155 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999886543 2457889999999999999999999999975 334556677888877777666554
Q ss_pred H
Q psy793 403 K 403 (414)
Q Consensus 403 k 403 (414)
.
T Consensus 156 ~ 156 (373)
T 1hz4_A 156 A 156 (373)
T ss_dssp H
T ss_pred H
Confidence 3
No 229
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.54 E-value=5e-07 Score=70.80 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 332 RAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 332 ~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.++...++..+..
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~ 73 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGAR 73 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999998887776654
No 230
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.51 E-value=3.6e-07 Score=90.95 Aligned_cols=114 Identities=12% Similarity=0.087 Sum_probs=93.4
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+.++|..|..+|+|++|+.+|+++|.+....-. ...|.....+.|+|.+|..+|+|++|+..+++||
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG--------~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYH--------HNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSC--------TTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 35677888999999999999999999999998643321 1157788999999999999999999999999999
Q ss_pred hc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 342 LM-----EPNN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 342 ~~-----~p~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
++ .|+. .+.+-.++.++..++.|++|...|+++.+-.-+|..
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~~ 470 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQP 470 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 76 3444 456778999999999999999999999765433333
No 231
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.48 E-value=7.6e-07 Score=88.60 Aligned_cols=80 Identities=14% Similarity=-0.015 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHH----hhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC---C
Q psy793 313 YTAALLNMAAVQLK----FKAYKRAINLCDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPN---D 381 (414)
Q Consensus 313 ~~~~~~nla~~~~~----l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~---~ 381 (414)
...+++++|.+|.. .+++++|+.+++++++.. ++.+++++|.+|.. .+++++|+..|++|++.+|+ +
T Consensus 362 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~ 439 (490)
T 2xm6_A 362 EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGT 439 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCC
Confidence 36789999999999 899999999999999864 68999999999998 89999999999999999954 8
Q ss_pred HHHHHHHHHHHHH
Q psy793 382 QQILKEIAFVRKQ 394 (414)
Q Consensus 382 ~~~~~~l~~~~~~ 394 (414)
..+...++.+...
T Consensus 440 ~~a~~~l~~~~~~ 452 (490)
T 2xm6_A 440 ENRNITEKKLTAK 452 (490)
T ss_dssp HHHHHHHTTSCHH
T ss_pred HHHHHHHHhcCHh
Confidence 8888888777553
No 232
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.45 E-value=1.8e-06 Score=86.73 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-------hhCHH-------HHHHHHHHHHh-cCC
Q psy793 281 HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-------FKAYK-------RAINLCDDILL-MEP 345 (414)
Q Consensus 281 ~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-------l~~~~-------~A~~~~~~al~-~~p 345 (414)
..|+..|++|+.. .|....+|+++|..+.+ +|+++ +|+..+++|++ +.|
T Consensus 255 ~~a~~~y~~al~~----------------~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p 318 (530)
T 2ooe_A 255 KRVMFAYEQCLLV----------------LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK 318 (530)
T ss_dssp HHHHHHHHHHHHH----------------HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHHHHHHHHHh----------------CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCc
Confidence 5788999999998 78888999999999987 78877 99999999997 899
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy793 346 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ-QILKEIAFVRKQMRHHLNLEKMTYARM 409 (414)
Q Consensus 346 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~k~~~~~~ 409 (414)
++..+|+.+|..+..+|++++|...|+++++++|.+. .++..++.+..+.++..+ .++.|.+.
T Consensus 319 ~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~-A~~~~~~A 382 (530)
T 2ooe_A 319 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKS-GRMIFKKA 382 (530)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred ccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHH-HHHHHHHH
Confidence 9999999999999999999999999999999999986 588888888776665544 34444443
No 233
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.31 E-value=6e-06 Score=82.08 Aligned_cols=107 Identities=12% Similarity=0.046 Sum_probs=55.2
Q ss_pred HHHHHhhhHHhh----hcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH----hhCHHHHHHH
Q psy793 265 RTIKNSGNEYFK----LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK----FKAYKRAINL 336 (414)
Q Consensus 265 ~~~~~~G~~~~~----~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~A~~~ 336 (414)
..+...|..|+. .+++++|+..|++|++. ....+++++|.+|.. .+++++|+.+
T Consensus 76 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~------------------~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 137 (490)
T 2xm6_A 76 PAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK------------------GLPQAQQNLGVMYHEGNGVKVDKAESVKW 137 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC------------------CCHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 445666767766 67777777777777643 122344445555544 4455555555
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
++++++. .++.+++.+|.+|.. .+++++|+..|+++++. ++..++..++.++.
T Consensus 138 ~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 194 (490)
T 2xm6_A 138 FRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSCNQLGYMYS 194 (490)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHh
Confidence 5554443 244445555555444 44455555555554443 24444444444443
No 234
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.31 E-value=5.2e-06 Score=78.53 Aligned_cols=118 Identities=11% Similarity=0.022 Sum_probs=85.9
Q ss_pred HHHHHhhhHHhhh---cCHHHHHHHHHHHHHHHHhhccC----------------CcHHH------------HHhhHHHH
Q psy793 265 RTIKNSGNEYFKL---NRMHDAQRKYKKAVRYIKWYNQS----------------QSKTQ------------QKHFRSYY 313 (414)
Q Consensus 265 ~~~~~~G~~~~~~---~~~~~A~~~y~~Al~~~~~~~~~----------------~~~~~------------~~~~~~~~ 313 (414)
-.++-+|..++.+ .++.+|+.+|++|+++-|.+... ..... .....+..
T Consensus 197 ydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~ 276 (372)
T 3ly7_A 197 LTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNL 276 (372)
T ss_dssp HHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcC
Confidence 3455566666654 45689999999999874422111 00000 01223445
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
..+|.-++..++..|++++|+..+++|+.++| +..+|..+|.++...|++++|++.|++|+.++|..+.
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 56677777788888999999999999999996 5778888999999999999999999999999998764
No 235
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.31 E-value=8e-06 Score=64.96 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhhC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKA---YKRAINLCDDILLMEPN-NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~---~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
....+|.|+|+.+..+ ..+++..++..+..+|. .-..+|.+|.+++++|+|++|.++.+.+|+..|+|..+.....
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 4667788888888665 56789999999998884 4789999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q psy793 390 FVRKQMRHH 398 (414)
Q Consensus 390 ~~~~~~~~~ 398 (414)
.+..++.+.
T Consensus 120 ~Ie~ki~kd 128 (134)
T 3o48_A 120 MVEDKIQKE 128 (134)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 887777653
No 236
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.30 E-value=2.4e-06 Score=69.79 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=82.7
Q ss_pred hcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy793 277 LNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGR 356 (414)
Q Consensus 277 ~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 356 (414)
.+++++|+..|++|.+. . ...+. +|.+|.....+++|+.+++++.+. .++.+++++|.
T Consensus 8 ~~d~~~A~~~~~~aa~~----------------g--~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~ 65 (138)
T 1klx_A 8 KKDLKKAIQYYVKACEL----------------N--EMFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGD 65 (138)
T ss_dssp HHHHHHHHHHHHHHHHT----------------T--CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHcC----------------C--CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHH
Confidence 36889999999999976 2 12223 999999999999999999999987 68999999999
Q ss_pred HHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 357 AQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 357 ~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
+|.. .+++++|+..|++|.+. +++.+...|+.++..
T Consensus 66 ~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 66 FYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 9999 89999999999999987 689999999999876
No 237
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.30 E-value=2.7e-06 Score=83.96 Aligned_cols=121 Identities=11% Similarity=0.089 Sum_probs=66.1
Q ss_pred HHHHhhhHHhhhc---CHHHHHHHHHHHHHHHHhhcc-----------C----CcHHHH-----HhhHHHHHHHHHHHHH
Q psy793 266 TIKNSGNEYFKLN---RMHDAQRKYKKAVRYIKWYNQ-----------S----QSKTQQ-----KHFRSYYTAALLNMAA 322 (414)
Q Consensus 266 ~~~~~G~~~~~~~---~~~~A~~~y~~Al~~~~~~~~-----------~----~~~~~~-----~~~~~~~~~~~~nla~ 322 (414)
.+...|..+.+.| ++++|+..|++|++.-+.... . .+.++. ... +....+++++|.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~~Lg~ 256 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWVSLAQ 256 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 4677888999999 999999999999876110000 0 000000 000 333445555555
Q ss_pred H-H--HHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 323 V-Q--LKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMN-----NFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 323 ~-~--~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg-----~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
+ + ...+++++|+.+++++++.. ++.+++++|.+|. .| ++++|+..|+++. |++..+...|+.++.
T Consensus 257 ~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~ 329 (452)
T 3e4b_A 257 LLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYR 329 (452)
T ss_dssp HHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHH
T ss_pred HHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHH
Confidence 5 2 34555555555555555432 5555555555555 33 5555555555555 555555555555544
No 238
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.25 E-value=1.4e-05 Score=64.38 Aligned_cols=84 Identities=11% Similarity=0.119 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHhhC---HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKA---YKRAINLCDDILLMEPN-NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~---~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
....+|.|+|+.+..+ -.+++..++..+..+|. .-..+|.+|.+++++|+|++|..+.+.+|+.+|+|..+.....
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 4566788888888665 45789999999998884 5679999999999999999999999999999999999999888
Q ss_pred HHHHHHHH
Q psy793 390 FVRKQMRH 397 (414)
Q Consensus 390 ~~~~~~~~ 397 (414)
.+..++.+
T Consensus 119 ~Ie~~i~k 126 (144)
T 1y8m_A 119 MVEDKIQK 126 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88766543
No 239
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.24 E-value=1e-05 Score=78.42 Aligned_cols=137 Identities=14% Similarity=0.155 Sum_probs=94.5
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC-----------------CcHHHHHhh-------------
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS-----------------QSKTQQKHF------------- 309 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~-----------------~~~~~~~~~------------- 309 (414)
.......+...|..|++.|+|++|+..|.+++.+.+..... ...+.....
T Consensus 51 ~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 130 (434)
T 4b4t_Q 51 RNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKR 130 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSC
T ss_pred hhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 34456678899999999999999999999999876543211 011111111
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM------EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
......++.++|.+|..+|+|.+|+..+++++.. .+....++..++.+|..+|+|++|...|++++.+.+....
T Consensus 131 ~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 210 (434)
T 4b4t_Q 131 VFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYC 210 (434)
T ss_dssp CSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred cHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCC
Confidence 1223567888889999999999999888888765 2334567888888999999999999999999888654332
Q ss_pred HHHHHHHHHHHHH
Q psy793 384 ILKEIAFVRKQMR 396 (414)
Q Consensus 384 ~~~~l~~~~~~~~ 396 (414)
.....+.+...++
T Consensus 211 ~~~~~~~~~~~~g 223 (434)
T 4b4t_Q 211 PTQTVAELDLMSG 223 (434)
T ss_dssp CHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHH
Confidence 2233333433333
No 240
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.19 E-value=5.7e-06 Score=75.27 Aligned_cols=90 Identities=12% Similarity=0.016 Sum_probs=80.7
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHH--HHHHHHHHHHHHHHh-----hCHHHHHHHHHHHHhcCCCC-
Q psy793 276 KLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSY--YTAALLNMAAVQLKF-----KAYKRAINLCDDILLMEPNN- 347 (414)
Q Consensus 276 ~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l-----~~~~~A~~~~~~al~~~p~~- 347 (414)
..+....|...+++|+++ +|. ...+|..+|..|.+. |+.++|..++++||+++|+.
T Consensus 175 Al~~l~~A~a~lerAleL----------------DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~ 238 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDL----------------WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHD 238 (301)
T ss_dssp CHHHHHHHHHHHHHHHHH----------------CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTC
T ss_pred HHHhHHHHHHHHHHHHHh----------------CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCC
Confidence 445678899999999999 776 566999999999996 99999999999999999975
Q ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC
Q psy793 348 VKALFRRGRAQVSM-NNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 348 ~~a~~~~g~~~~~l-g~~~~A~~~~~~al~l~P~~ 381 (414)
..+++..|..+... +++++|.+.+++++..+|..
T Consensus 239 id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 239 PDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp SHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred chHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 99999999999884 99999999999999998763
No 241
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.17 E-value=1.3e-05 Score=66.01 Aligned_cols=78 Identities=13% Similarity=0.087 Sum_probs=66.1
Q ss_pred HHHHHHhhhHHhhhc---CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhH-H-HHHHHHHHHHHHHHHhhCHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLN---RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFR-S-YYTAALLNMAAVQLKFKAYKRAINLCD 338 (414)
Q Consensus 264 a~~~~~~G~~~~~~~---~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~-~-~~~~~~~nla~~~~~l~~~~~A~~~~~ 338 (414)
.+..++.|..+.+.+ ++++++..++..++. + | ....+++++|..|+++++|++|+.+++
T Consensus 32 ~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~----------------~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~ 95 (152)
T 1pc2_A 32 KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK----------------GSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 95 (152)
T ss_dssp HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH----------------SCHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----------------CCccchHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 355777888888877 777999999998887 4 5 567899999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHH
Q psy793 339 DILLMEPNNVKALFRRGRA 357 (414)
Q Consensus 339 ~al~~~p~~~~a~~~~g~~ 357 (414)
++|+++|+|..|..-+-.+
T Consensus 96 ~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 96 GLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHCTTCHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHH
Confidence 9999999999887655443
No 242
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.14 E-value=1.3e-05 Score=79.09 Aligned_cols=105 Identities=12% Similarity=-0.014 Sum_probs=80.9
Q ss_pred HHHHHhhhH-H--hhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh-----CHHHHHHH
Q psy793 265 RTIKNSGNE-Y--FKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK-----AYKRAINL 336 (414)
Q Consensus 265 ~~~~~~G~~-~--~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-----~~~~A~~~ 336 (414)
..+...|.. + ...+++++|+..|++|++. ....+++++|.+|. .| ++++|+.+
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~------------------g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~ 309 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA------------------DQPRAELLLGKLYY-EGKWVPADAKAAEAH 309 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT------------------TCHHHHHHHHHHHH-HCSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC------------------CCHHHHHHHHHHHH-cCCCCCCCHHHHHHH
Confidence 456677777 3 4688999999999998864 25677888888887 44 88899999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVS----MNNFEQGLQDYEQALDLLPNDQQILKEIAFVRK 393 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 393 (414)
+++|+ +.++.+++++|.+|.. ..++++|+..|+++.+. ++..+...|+.++.
T Consensus 310 ~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 365 (452)
T 3e4b_A 310 FEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLFS 365 (452)
T ss_dssp HHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHHH
T ss_pred HHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHHH
Confidence 88888 7888888888888876 44888888888888774 45566666666654
No 243
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=1.2e-05 Score=77.81 Aligned_cols=104 Identities=9% Similarity=-0.011 Sum_probs=81.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...|..++..|+|.+|+..+.+++....... ..+....++.+++.+|..+++|++|...+++++.+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLD----------DKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSS----------CSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcc----------cchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 34556789999999999999999999998854433 15677889999999999999999999999999988
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
.+.........+..+..+|.+..+...|..|...
T Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~ 238 (434)
T 4b4t_Q 205 ANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSY 238 (434)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHH
T ss_pred hhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6544444556677777777777676667766543
No 244
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.08 E-value=2e-05 Score=85.56 Aligned_cols=124 Identities=15% Similarity=0.092 Sum_probs=91.1
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc----cCCcHHHHHhh--HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN----QSQSKTQQKHF--RSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~----~~~~~~~~~~~--~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
.+.|..+...|.|++|...|+++-....... .....+...++ ......+|+++|.++.++|+|++|+..|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 3469999999999999999988764322100 00111111111 2344789999999999999999999999886
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 342 LMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 342 ~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
+++.+|++.|.++..+|+|++|+++|+.|.+..++ +.+...++.++.++++
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e-~~Idt~LafaYAKl~r 1182 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE-SYVETELIFALAKTNR 1182 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-ccccHHHHHHHHhhcC
Confidence 88999999999999999999999999999998844 2223335555555433
No 245
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.08 E-value=6.8e-05 Score=62.09 Aligned_cols=118 Identities=8% Similarity=-0.000 Sum_probs=88.6
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC--
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME-- 344 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~-- 344 (414)
+++....++..+.|+.|+..+..++.+.+....... -.....++..+|.+++..++|.+|...|++||++.
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~s-------p~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~ 95 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFS-------PPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKA 95 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCccccc-------HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH
Confidence 677888999999999999999999998543331111 23456788999999999999999999999998552
Q ss_pred ----C-------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy793 345 ----P-------------------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVR 392 (414)
Q Consensus 345 ----p-------------------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 392 (414)
+ ......|+.|.||..++++++|+..++..-... ..+.+...|++++
T Consensus 96 l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k~-Rt~kvnm~LakLy 165 (167)
T 3ffl_A 96 LSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSRQ-RTPKINMLLANLY 165 (167)
T ss_dssp C--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGGG-CCHHHHHHHHHHC
T ss_pred HhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCchh-cCHHHHHHHHHHh
Confidence 1 112678999999999999999999887631111 2355556665553
No 246
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.07 E-value=2.5e-05 Score=72.38 Aligned_cols=122 Identities=12% Similarity=0.095 Sum_probs=96.2
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHH--HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS--YYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~--~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
+...|..+...|++++|+..+.++|.. .+ ....++..++.+++++++.+.|.+.+++..+.+
T Consensus 103 ~~~la~i~~~~g~~eeAL~~l~~~i~~----------------~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~ 166 (310)
T 3mv2_B 103 LYLLATAQAILGDLDKSLETCVEGIDN----------------DEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAI 166 (310)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHTS----------------SCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhcc----------------CCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 457889999999999999999999765 43 678899999999999999999999999999999
Q ss_pred CC----CHHHHHHHHHH--HHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy793 345 PN----NVKALFRRGRA--QVSMN--NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMT 405 (414)
Q Consensus 345 p~----~~~a~~~~g~~--~~~lg--~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~ 405 (414)
|+ +...+..++.+ ....| ++++|...|+++.+..|+.......+. ++..+++..+.++..
T Consensus 167 ~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~~L 234 (310)
T 3mv2_B 167 EDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQGIV 234 (310)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHHHH
Confidence 83 23345555555 55556 999999999999998887333333333 777777777776653
No 247
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.06 E-value=3.3e-05 Score=84.03 Aligned_cols=107 Identities=15% Similarity=0.183 Sum_probs=87.6
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.+...|..++..|+|++|+.+|.+|- .|..+|.||.++|+|++|++.+.+|....+
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~------------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~a 1252 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS------------------------NFGRLASTLVHLGEYQAAVDGARKANSTRT 1252 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh------------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHH
Confidence 45678999999999999999998753 456788899999999999999888854433
Q ss_pred -------------------------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy793 346 -------------------------NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 346 -------------------------~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 396 (414)
.++..+..++..|..+|.|++|+..|++++.++|.+......++.++.+-+
T Consensus 1253 Wkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1253 WKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 134455677788999999999999999999999999999988888877543
No 248
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.93 E-value=6.2e-05 Score=69.77 Aligned_cols=115 Identities=8% Similarity=-0.020 Sum_probs=87.4
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHH------HHHHHHHHHHHHHHHhh--CHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRS------YYTAALLNMAAVQLKFK--AYKRAIN 335 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~------~~~~~~~nla~~~~~l~--~~~~A~~ 335 (414)
.+.+...+..+++.|+.+.|.+.+++..+. .+ ..+.+++--|++.+..| ++.+|..
T Consensus 136 lea~~l~vqi~L~~~r~d~A~k~l~~~~~~----------------~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~ 199 (310)
T 3mv2_B 136 TELLLLAIEVALLNNNVSTASTIFDNYTNA----------------IEDTVSGDNEMILNLAESYIKFATNKETATSNFY 199 (310)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc----------------CccccccchHHHHHHHHHHHHHHhCCccHHHHHH
Confidence 344556778889999999999999998777 44 22223333355577777 9999999
Q ss_pred HHHHHHhcCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----------CCCCHHHHHHHHHHHHHHHH
Q psy793 336 LCDDILLMEPN--NVKALFRRGRAQVSMNNFEQGLQDYEQALDL----------LPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 336 ~~~~al~~~p~--~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l----------~P~~~~~~~~l~~~~~~~~~ 397 (414)
.|+++.+..|+ ....+++ +++.+|++++|.+.+++++++ +|+|+.++.++..+...+++
T Consensus 200 ~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk 270 (310)
T 3mv2_B 200 YYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL 270 (310)
T ss_dssp HHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh
Confidence 99999888886 3445555 999999999999999988887 58899999777666555543
No 249
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.83 E-value=5.6e-05 Score=73.87 Aligned_cols=92 Identities=5% Similarity=0.069 Sum_probs=74.1
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+.+.|..|..+|+|++|+.+|+++|.+....-. ...|.....++|+|.+|..+|+|++|+..+++|+
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg--------~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFP--------GSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSC--------SSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcC--------CCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 45777888999999999999999999999998653321 1157888999999999999999999999999999
Q ss_pred hc-----CCCCH---HHHHHHHHHHHHc
Q psy793 342 LM-----EPNNV---KALFRRGRAQVSM 361 (414)
Q Consensus 342 ~~-----~p~~~---~a~~~~g~~~~~l 361 (414)
++ .|+++ ..+.+++.+...+
T Consensus 399 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 399 DIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 76 45554 4556666666544
No 250
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.82 E-value=4.6e-05 Score=57.52 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=60.9
Q ss_pred HHHHHHhhhHHhhhcC---HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNR---MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~---~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
+..+...|..++-.++ ..+|...+++||.+ +|..+.+++.+|..+++.|+|++|+.+++++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~----------------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQL----------------EPYNEAALSLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHH----------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH----------------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4556777777765444 79999999999999 9999999999999999999999999999999
Q ss_pred HhcCCCCH
Q psy793 341 LLMEPNNV 348 (414)
Q Consensus 341 l~~~p~~~ 348 (414)
++.+|.++
T Consensus 70 l~~~p~~~ 77 (93)
T 3bee_A 70 LDSNDPNL 77 (93)
T ss_dssp HTCCCTTC
T ss_pred HhhCCCCc
Confidence 99999843
No 251
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.75 E-value=0.00014 Score=70.49 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=70.2
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.+..+..+|..+.+.|+|++|++.|.+|.. +..|...+.++...++|+.|..+... |.
T Consensus 147 ~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~---------------------~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~ 204 (449)
T 1b89_A 147 NVSNFGRLASTLVHLGEYQAAVDGARKANS---------------------TRTWKEVCFACVDGKEFRLAQMCGLH-IV 204 (449)
T ss_dssp HTTCHHHHHHHHHTTTCHHHHHHHHHHHTC---------------------HHHHHHHHHHHHHTTCHHHHHHTTTT-TT
T ss_pred HhhhHHHHHHHHHHhccHHHHHHHHHHcCC---------------------chhHHHHHHHHHHcCcHHHHHHHHHH-HH
Confidence 333344455555555555555555555421 24445555555566666666443332 22
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 396 (414)
.+| .-...+..+|...|.+++|+..+++++.+++.+-.+...++.++.+-+
T Consensus 205 ~~a---d~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 205 VHA---DELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp TCH---HHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred hCH---hhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 333 334456678999999999999999999999999999999988887543
No 252
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.74 E-value=0.00012 Score=66.60 Aligned_cols=66 Identities=8% Similarity=-0.041 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHHhcCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH
Q psy793 329 AYKRAINLCDDILLMEPN--NVKALFRRGRAQVSM-----NNFEQGLQDYEQALDLLPND-QQILKEIAFVRKQ 394 (414)
Q Consensus 329 ~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~l-----g~~~~A~~~~~~al~l~P~~-~~~~~~l~~~~~~ 394 (414)
....|...+++|++++|+ +..+|..+|..|..+ |+.++|.+.|++|++++|+. ..++..++..+..
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 478999999999999999 677999999999996 99999999999999999975 7777777776655
No 253
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.71 E-value=0.00011 Score=71.76 Aligned_cols=74 Identities=4% Similarity=0.029 Sum_probs=63.4
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
..+..+.+.|..|..+|+|++|+.+|+++|.+....-.. ..|.....++|+|.+|..+|+|++|+..+++|+
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~--------~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV--------YSLNVASMWLKLGRLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS--------SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC--------CChHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 346678889999999999999999999999986533211 147788899999999999999999999999999
Q ss_pred hc
Q psy793 342 LM 343 (414)
Q Consensus 342 ~~ 343 (414)
++
T Consensus 410 ~i 411 (433)
T 3qww_A 410 AI 411 (433)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 254
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.45 E-value=0.00026 Score=68.70 Aligned_cols=103 Identities=14% Similarity=0.153 Sum_probs=71.9
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP 345 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p 345 (414)
.+...|..++..|.|++|+.+|.++ .-|.++|.|+.++|+|++|++.+.+|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a------------------------~n~~~LA~~L~~Lg~yq~AVea~~KA----- 174 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV------------------------SNFGRLASTLVHLGEYQAAVDGARKA----- 174 (449)
T ss_dssp -------------CTTTHHHHHHHT------------------------TCHHHHHHHHHTTTCHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh------------------------hhHHHHHHHHHHhccHHHHHHHHHHc-----
Confidence 6888999999999999999999865 35679999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 346 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 346 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
.+++.|.....++...|+|+.|..+... +..+|++ ...+..++.+.+...+.
T Consensus 175 ~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEa 226 (449)
T 1b89_A 175 NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEEL 226 (449)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHH
T ss_pred CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHH
Confidence 4789999999999999999999877775 4455544 33455566555555443
No 255
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.31 E-value=0.0014 Score=51.90 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGR 356 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 356 (414)
..-.+++.+|..++++|+|.+|+.+++.+|+++|+|..|.--+..
T Consensus 72 ~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~ 116 (126)
T 1nzn_A 72 EQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERL 116 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 566889999999999999999999999999999999887654433
No 256
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.31 E-value=0.0032 Score=60.48 Aligned_cols=113 Identities=12% Similarity=0.021 Sum_probs=93.3
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhcc-C-----CcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQ-S-----QSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLC 337 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~ 337 (414)
...+...|......++...|+..+.+|+.+..-... . -.......+......+...++.+++.+|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 445566677777789999999999999987421110 0 0134456667788889999999999999999999999
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 338 DDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 338 ~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
..++..+|-+..+|..+-.+++..|+..+|++.|+++.+
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999865
No 257
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.19 E-value=0.0019 Score=53.42 Aligned_cols=94 Identities=16% Similarity=0.108 Sum_probs=65.4
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCc----------HHHHHhhHHHHHHHHHHHHHHHHHhhCHHH
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS----------KTQQKHFRSYYTAALLNMAAVQLKFKAYKR 332 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~----------~~~~~~~~~~~~~~~~nla~~~~~l~~~~~ 332 (414)
.+..+...|+.+|.+++|..|...|++||........... ..+... .+...++.+.+|.||.+++++++
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~-~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQC-LPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------C-CCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCccccc-ccchHHHHHHHHHHHHHHCCHHH
Confidence 4677889999999999999999999999988653221110 000001 12345788999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Q psy793 333 AINLCDDILLMEPNNVKALFRRGRAQ 358 (414)
Q Consensus 333 A~~~~~~al~~~p~~~~a~~~~g~~~ 358 (414)
|+..++.+-. ....++....+|..|
T Consensus 141 Ai~~Le~Ip~-k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 141 AIAILDGIPS-RQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTSCG-GGCCHHHHHHHHHHC
T ss_pred HHHHHhcCCc-hhcCHHHHHHHHHHh
Confidence 9998665422 234667777777654
No 258
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.07 E-value=0.0048 Score=48.97 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRA 357 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 357 (414)
..-.+++.+|..+.++|+|.+|..+++.+|+++|+|..|.--+..+
T Consensus 76 ~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 76 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMV 121 (134)
T ss_dssp GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Confidence 4568899999999999999999999999999999998876544433
No 259
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.03 E-value=0.011 Score=47.92 Aligned_cols=119 Identities=8% Similarity=0.015 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINL 336 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~ 336 (414)
++.-...+..+-..|+-+.. +-.+.-+..|++|+..+++.. ......++.+|.+.|.- ..+++.++|.+.
T Consensus 13 yd~W~~yl~llE~~g~p~~d-~~l~rlrd~YerAia~~Pp~k--------~~~wrrYI~LWIrYA~~-~ei~D~d~aR~v 82 (161)
T 4h7y_A 13 PEDWLSLLLKLEKNSVPLSD-ALLNKLIGRYSQAIEALPPDK--------YGQNESFARIQVRFAEL-KAIQEPDDARDY 82 (161)
T ss_dssp HHHHHHHHHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSCGGG--------GTTCHHHHHHHHHHHHH-HHHHCGGGCHHH
T ss_pred HHHHHHHHHHHHHcCCCchh-hHHHHHHHHHHHHHHcCCccc--------cccHHHHHHHHHHHHHH-HHhcCHHHHHHH
Confidence 33333334444334443333 333788899999999855431 33467788888888855 788999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHH
Q psy793 337 CDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQIL 385 (414)
Q Consensus 337 ~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 385 (414)
|+.++.+....++.|...|+--.++|+...|.+.+.+|+.+.|...+..
T Consensus 83 y~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 83 FQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHH
Confidence 9999999888999999999999999999999999999999999876544
No 260
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.01 E-value=0.022 Score=58.70 Aligned_cols=142 Identities=6% Similarity=0.046 Sum_probs=96.2
Q ss_pred HhhhHHhhhcCHHHHHHHHHHHHHHHHhhcc------CCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 269 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQ------SQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 269 ~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~------~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
..+....+.|+++.|...|++++..+..... ....+...........+|...+....+.+..+.|...+.+|++
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455555677788888888888876421100 0001111122223456788888888889999999999999998
Q ss_pred c-CCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy793 343 M-EPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLEKMTYARMFQ 411 (414)
Q Consensus 343 ~-~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 411 (414)
. .+...+.|...|..-...+ +++.|.+.|+++++..|++...+..+......+++ .+..|..|.+...
T Consensus 463 ~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~-~~~AR~lferal~ 532 (679)
T 4e6h_A 463 LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNE-ESQVKSLFESSID 532 (679)
T ss_dssp TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC-HHHHHHHHHHHTT
T ss_pred hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCC-HHHHHHHHHHHHH
Confidence 8 5555677777777766665 59999999999999999999888766666554433 3445556665443
No 261
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.82 E-value=0.0088 Score=48.07 Aligned_cols=44 Identities=18% Similarity=0.130 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRG 355 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g 355 (414)
..-.+++.+|..+.++++|.+|..+++.+|+++|+|..|.--+.
T Consensus 75 ~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~ 118 (144)
T 1y8m_A 75 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 118 (144)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 35578999999999999999999999999999999987754433
No 262
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.68 E-value=0.01 Score=61.23 Aligned_cols=82 Identities=13% Similarity=0.008 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHH-HHHHHHHhcCCCCHHHHHHHHHHH
Q psy793 280 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAI-NLCDDILLMEPNNVKALFRRGRAQ 358 (414)
Q Consensus 280 ~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~-~~~~~al~~~p~~~~a~~~~g~~~ 358 (414)
.+.....|++||.. .|....+|+..|..+...++.++|. ..+++|+...|.+...|+..+...
T Consensus 325 ~~Rv~~~Ye~aL~~----------------~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~e 388 (679)
T 4e6h_A 325 KARMTYVYMQAAQH----------------VCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQY 388 (679)
T ss_dssp HHHHHHHHHHHHHH----------------TTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----------------cCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 34567789999998 6778899999999999999999997 999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhh
Q psy793 359 VSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 359 ~~lg~~~~A~~~~~~al~l 377 (414)
...|++++|...|+++++.
T Consensus 389 e~~~~~e~aR~iyek~l~~ 407 (679)
T 4e6h_A 389 ELNTKIPEIETTILSCIDR 407 (679)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHH
Confidence 9999999999999999985
No 263
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.36 E-value=0.025 Score=58.57 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQA 374 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 374 (414)
+....++.--|.-++..++|+-|+..+++|....|..-..|+.++.||..+|+|+.|+-.+..|
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4445566667777888999999999999999999999999999999999999999999988887
No 264
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.13 E-value=0.013 Score=55.29 Aligned_cols=67 Identities=4% Similarity=-0.037 Sum_probs=57.4
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+...+..++..|++++|+..+++|+.+ ++. ...|..+|.++...|++++|++.+.+|+.++
T Consensus 278 ~~~~alal~~l~~gd~d~A~~~l~rAl~L----------------n~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~ 340 (372)
T 3ly7_A 278 IIYQIKAVSALVKGKTDESYQAINTGIDL----------------EMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLR 340 (372)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH----------------CCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHhc----------------CCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 34455677777889999999999999999 443 4577889999999999999999999999999
Q ss_pred CCCH
Q psy793 345 PNNV 348 (414)
Q Consensus 345 p~~~ 348 (414)
|...
T Consensus 341 P~~~ 344 (372)
T 3ly7_A 341 PGAN 344 (372)
T ss_dssp CSHH
T ss_pred CCcC
Confidence 9765
No 265
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.56 E-value=0.12 Score=49.43 Aligned_cols=99 Identities=10% Similarity=0.029 Sum_probs=80.2
Q ss_pred HhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC----
Q psy793 269 NSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME---- 344 (414)
Q Consensus 269 ~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~---- 344 (414)
..|..|+..|+|.+|+..+.+.++-+.... .......++......|..++++.++...+++|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d----------d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~ 173 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD----------DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY 173 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS----------CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc----------cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC
Confidence 589999999999999999999998765422 146778899999999999999999999999997553
Q ss_pred C-CC--HHHHHHHHHHHH-HcCCHHHHHHHHHHHHhh
Q psy793 345 P-NN--VKALFRRGRAQV-SMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 345 p-~~--~~a~~~~g~~~~-~lg~~~~A~~~~~~al~l 377 (414)
+ .. +.....-|..++ ..++|..|..+|-.+++-
T Consensus 174 ~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 174 CPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 1 22 233445588899 899999999999998753
No 266
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.44 E-value=0.48 Score=46.74 Aligned_cols=128 Identities=8% Similarity=-0.017 Sum_probs=88.5
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC--------CcHHHHHh----------------hHHHHHHHHHHHH
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS--------QSKTQQKH----------------FRSYYTAALLNMA 321 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~--------~~~~~~~~----------------~~~~~~~~~~nla 321 (414)
.+...+..+...|+.+.|...|.+|+.. +..... ...+.... .......+|...+
T Consensus 215 lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~ 293 (493)
T 2uy1_A 215 VYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHL 293 (493)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHH
Confidence 3556677778889999999999999988 432100 00000000 0122335677888
Q ss_pred HHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q psy793 322 AVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMN-NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 322 ~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 395 (414)
....+.+..+.|...+++| ...+.....|...|..-...+ +.+.|...|+++++..|+++..+.........+
T Consensus 294 ~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~ 367 (493)
T 2uy1_A 294 NYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRI 367 (493)
T ss_dssp HHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 8888889999999999999 443345567777777766666 699999999999999999887765554444333
No 267
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.40 E-value=0.098 Score=51.63 Aligned_cols=81 Identities=7% Similarity=-0.003 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
.++..+|........+..|..+|.+|+.+.|++..+|..+|......++.-+|+-+|-+++......+.+..+|..+...
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 46677888888888899999999999999999999999999999999999999999999999887789999999888765
Q ss_pred H
Q psy793 395 M 395 (414)
Q Consensus 395 ~ 395 (414)
.
T Consensus 233 ~ 233 (497)
T 1ya0_A 233 A 233 (497)
T ss_dssp H
T ss_pred H
Confidence 4
No 268
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.33 E-value=0.23 Score=40.97 Aligned_cols=72 Identities=18% Similarity=0.144 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHH--hc---------------CCCCHHHHH-HHHHHHHHcCCHHHHHHHHHHHH
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDIL--LM---------------EPNNVKALF-RRGRAQVSMNNFEQGLQDYEQAL 375 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al--~~---------------~p~~~~a~~-~~g~~~~~lg~~~~A~~~~~~al 375 (414)
.+..+--+.||.++++|..|+...+..| +. +|.+.+-++ -+|..+...|+.++|+..|....
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 3455667899999999999999999999 22 344455444 56999999999999999999999
Q ss_pred hhCCCCHHHH
Q psy793 376 DLLPNDQQIL 385 (414)
Q Consensus 376 ~l~P~~~~~~ 385 (414)
..+|--+.+.
T Consensus 142 ~~~~lf~~vE 151 (242)
T 3kae_A 142 GKSFLFSPVE 151 (242)
T ss_dssp HHCCCHHHHH
T ss_pred CCccccchHH
Confidence 9887655544
No 269
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.93 E-value=0.19 Score=44.95 Aligned_cols=70 Identities=13% Similarity=0.118 Sum_probs=61.6
Q ss_pred HHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q psy793 322 AVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFV 391 (414)
Q Consensus 322 ~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 391 (414)
..+++.+..++|+..+...++-+|.+++....+-+.+.-.|+|+.|.+.++.+.+++|+.......+..+
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~l 74 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL 74 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999999986655444333
No 270
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=94.51 E-value=0.49 Score=43.39 Aligned_cols=119 Identities=15% Similarity=0.154 Sum_probs=70.7
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC-------HHHHHHH--H
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA-------YKRAINL--C 337 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~-------~~~A~~~--~ 337 (414)
....|..++..|+|++|+..|+.+|..+.-...... ++..+.......+...+-.+-+++.+ ..+.++. |
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~-~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAY 195 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDA-EDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAY 195 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 556899999999999999999999999876654433 22223333333332222222223311 1111111 1
Q ss_pred HHHHhcCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q psy793 338 DDILLMEPNNVKALFRRGR-AQVSMNNFEQGLQDYEQALDLLPNDQQILK 386 (414)
Q Consensus 338 ~~al~~~p~~~~a~~~~g~-~~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 386 (414)
=.-.++.|..--.-++.|. ..++.++|.-|....++.|++.|..+.+.+
T Consensus 196 FT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a~q 245 (325)
T 3mv2_A 196 FTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQ 245 (325)
T ss_dssp GGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHHHH
T ss_pred hccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHHHH
Confidence 1112334444334445555 366789999999999999999997554443
No 271
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.34 E-value=0.2 Score=48.47 Aligned_cols=99 Identities=12% Similarity=0.100 Sum_probs=77.9
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC--
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME-- 344 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~-- 344 (414)
+..+|..|++.|+++.|++.|.++...... ....+.++++...+++..++|..+..++.++-.+-
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~-------------~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAIS-------------TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTC-------------CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-------------hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 456899999999999999999998876322 23456788999999999999999999999996552
Q ss_pred -CCC-H--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 345 -PNN-V--KALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 345 -p~~-~--~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
++. . +.....|..+...++|..|...|-.++.-.
T Consensus 201 ~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 201 GGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp CCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 221 2 234455777888899999999998887654
No 272
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.26 E-value=0.063 Score=55.62 Aligned_cols=61 Identities=11% Similarity=0.073 Sum_probs=55.3
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
...+..++..+.++++|+-|+.+-++|+.+ .|.....|+.||.||.++++|+.|+-.++-+
T Consensus 337 ~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~----------------aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 337 SDLLNIQTNFLLNRGDYELALGVSNTSTEL----------------ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hHHHHHHHHHHhccCcHHHHHHHHHHHHhc----------------CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 346777899999999999999999999999 7888899999999999999999999877666
No 273
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=93.99 E-value=0.21 Score=36.19 Aligned_cols=40 Identities=25% Similarity=0.244 Sum_probs=34.4
Q ss_pred HHH-HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHh
Q psy793 257 LNQ-MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 296 (414)
Q Consensus 257 ~~~-~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~ 296 (414)
... ....|..+..+|...=+.|+|++|+.+|..||+++-.
T Consensus 3 ~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 3 AQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 344 5677888999999999999999999999999998643
No 274
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.46 E-value=0.48 Score=42.33 Aligned_cols=63 Identities=8% Similarity=0.008 Sum_probs=56.6
Q ss_pred hhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHH
Q psy793 271 GNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVK 349 (414)
Q Consensus 271 G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~ 349 (414)
...+++.++.++|+......|+. .|.+......+-..+.-.|+|++|...++.+.+++|....
T Consensus 4 ~~~ll~~g~L~~al~~~~~~VR~----------------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 4 WKNALSEGQLQQALELLIEAIKA----------------SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHHTTTTCHHHHHHHHHHHHHT----------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHh----------------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 34678999999999999999998 8888888889999999999999999999999999997644
No 275
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=93.22 E-value=4.4 Score=37.03 Aligned_cols=116 Identities=10% Similarity=0.160 Sum_probs=70.3
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCH-------HHHHHHHHH
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAY-------KRAINLCDD 339 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~-------~~A~~~~~~ 339 (414)
....|..++..|+|++|+..|+.+|..+.-.... ..++..+.......+...+-.+-+++.+- +.....++-
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~-~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lEL 183 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVD-NKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEM 183 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCC-SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeec-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHH
Confidence 5678999999999999999999999987655432 23333343333333333332233333211 121122222
Q ss_pred H-----HhcCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHH
Q psy793 340 I-----LLMEPNNVKALFRRGR-AQVSMNNFEQGLQDYEQALDLLPNDQQ 383 (414)
Q Consensus 340 a-----l~~~p~~~~a~~~~g~-~~~~lg~~~~A~~~~~~al~l~P~~~~ 383 (414)
+ .++.|.+--.-++.|. ..++.++|.-|....++.|++.|..+.
T Consensus 184 AAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~ 233 (320)
T 3mkr_B 184 AAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEV 233 (320)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 2 2344544444445555 366789999999999999999986443
No 276
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=93.03 E-value=1.1 Score=42.77 Aligned_cols=139 Identities=9% Similarity=0.087 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHh----------------hccC-CcHH----------HHHhh-H
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW----------------YNQS-QSKT----------QQKHF-R 310 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~----------------~~~~-~~~~----------~~~~~-~ 310 (414)
.....-..+...|..|.+.|++++-..........+.. .... ...+ ++... .
T Consensus 14 ~~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 93 (394)
T 3txn_A 14 RIRIKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEK 93 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 34445677889999999999999888877444332211 1100 0111 11111 1
Q ss_pred HHHH--HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---C
Q psy793 311 SYYT--AALLNMAAVQLKFKAYKRAINLCDDILLMEPN------NVKALFRRGRAQVSMNNFEQGLQDYEQALDLL---P 379 (414)
Q Consensus 311 ~~~~--~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~---P 379 (414)
-.+. .+-..+|..|+..|+|.+|+..++++++.-.. -...+....+.|..++++.++.+.|.+|.... +
T Consensus 94 r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~ 173 (394)
T 3txn_A 94 RTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY 173 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC
Confidence 1122 24458899999999999999999988864211 13466777889999999999999999998764 3
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy793 380 NDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 380 ~~~~~~~~l~~~~~~~~~ 397 (414)
.++.++..+..+...+.-
T Consensus 174 ~~p~i~a~i~~~~Gi~~l 191 (394)
T 3txn_A 174 CPPKVQGALDLQSGILHA 191 (394)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhHHHH
Confidence 456666555555444443
No 277
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=92.60 E-value=1.1 Score=44.09 Aligned_cols=112 Identities=8% Similarity=-0.020 Sum_probs=82.1
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHhc
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFK-AYKRAINLCDDILLM 343 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-~~~~A~~~~~~al~~ 343 (414)
..+..-+....+.+..+.|...|.+| .. + +....+|...|..-...+ +.+.|...++.+++.
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~-~---------------~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~ 349 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GN-E---------------GVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLK 349 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TT-S---------------CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hC-C---------------CCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHH
Confidence 44556666666778899999999999 32 1 111235555566666666 599999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q psy793 344 EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRH 397 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 397 (414)
-|+.+..+...+.....+|+.+.|...|+++ +....++..........+.
T Consensus 350 ~~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 350 HPDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC
Confidence 9998887777788788899999999999998 3456666666655555443
No 278
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=92.57 E-value=0.45 Score=34.39 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHh
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 296 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~ 296 (414)
.....+.|..+..+|...=+.|+|++|+.+|.+||+.+-.
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999999999998653
No 279
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=92.25 E-value=7.1 Score=38.33 Aligned_cols=133 Identities=11% Similarity=0.081 Sum_probs=89.0
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHH------------HHhhccCC---------cHHHHHhh-HH-------HHHHHH
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRY------------IKWYNQSQ---------SKTQQKHF-RS-------YYTAAL 317 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~------------~~~~~~~~---------~~~~~~~~-~~-------~~~~~~ 317 (414)
+...=+.+.+.|++++|+..|.+..+. +.-..... ..+....+ .. .+...|
T Consensus 29 l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~ty 108 (501)
T 4g26_A 29 LKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATF 108 (501)
T ss_dssp HHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHH
Confidence 344456788999999999999877653 11000000 01111111 11 134578
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHH
Q psy793 318 LNMAAVQLKFKAYKRAINLCDDILLME-PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 318 ~nla~~~~~l~~~~~A~~~~~~al~~~-p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l--~P~~~~~~~~l~~~~~~ 394 (414)
..+..+|.+.|++++|+..+++..+.. ..+...|..+-.+|...|++++|.+.|+...+. .|+ ......+-.+..+
T Consensus 109 n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd-~~ty~~Li~~~~~ 187 (501)
T 4g26_A 109 TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPE-EPELAALLKVSMD 187 (501)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHhh
Confidence 888899999999999999999887653 337778888889999999999999999998875 354 4444555555555
Q ss_pred HHHHHH
Q psy793 395 MRHHLN 400 (414)
Q Consensus 395 ~~~~~~ 400 (414)
.++..+
T Consensus 188 ~g~~d~ 193 (501)
T 4g26_A 188 TKNADK 193 (501)
T ss_dssp TTCHHH
T ss_pred CCCHHH
Confidence 544433
No 280
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=92.18 E-value=4.4 Score=37.48 Aligned_cols=110 Identities=10% Similarity=0.034 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHhhhHHhhhcCHHHHHHH-HHHHHHHHHhhccCCcHHHHHhhHHHHH------------HHHHHHHHHH
Q psy793 258 NQMEDVIRTIKNSGNEYFKLNRMHDAQRK-YKKAVRYIKWYNQSQSKTQQKHFRSYYT------------AALLNMAAVQ 324 (414)
Q Consensus 258 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~-y~~Al~~~~~~~~~~~~~~~~~~~~~~~------------~~~~nla~~~ 324 (414)
++.++.-..++...+.|.++++|++|++. |.-|+.++.... .....++.-..+ ....++..++
T Consensus 29 ~~~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q----~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~ 104 (336)
T 3lpz_A 29 EEQYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQ----GGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCL 104 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCC----cchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 34467777888899999999999999996 555555544211 011111111111 1111222222
Q ss_pred HHhhC--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q psy793 325 LKFKA--------YKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDY 371 (414)
Q Consensus 325 ~~l~~--------~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~ 371 (414)
..... .++|+.+..+.=...-.++..|..+|..|..-+++.+|...|
T Consensus 105 ~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 105 RLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 22221 122333333211122346778888899999999998887776
No 281
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=92.18 E-value=0.95 Score=35.02 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 298 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~ 298 (414)
..+..|..+..+|...=..++|++|+.+|..|++++-...
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 4667788889999999999999999999999999865433
No 282
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.04 E-value=3 Score=40.35 Aligned_cols=105 Identities=14% Similarity=0.067 Sum_probs=79.3
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.++.....+..++..|+|.+|.........-. .. ..+ ....+.++......|+..++|.+|...++++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et--~~-~~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~ 205 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVET--YG-SME-------MSEKIQFILEQMELSILKGDYSQATVLSRKILK 205 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH--CS-SSC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH--Hh-ccc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 36667788999999999999999988776321 11 111 456678888999999999999999999998742
Q ss_pred ---cCCCC--HH--HHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 343 ---MEPNN--VK--ALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 343 ---~~p~~--~~--a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
-.+.. .+ .+...|..+...++|.+|..+|..+++.
T Consensus 206 ~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 206 KTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 12222 23 3456688888999999999999998864
No 283
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=92.04 E-value=1.2 Score=32.97 Aligned_cols=39 Identities=10% Similarity=0.019 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 298 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~ 298 (414)
....|..+...|...-+.++|++|+.+|..|++++-...
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 455678888999999999999999999999999875544
No 284
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=91.82 E-value=0.85 Score=33.03 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHh
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 296 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~ 296 (414)
.....|..+..+|...=..|+|++|+.+|..|++++-.
T Consensus 8 ~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~ 45 (85)
T 2v6x_A 8 DFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLML 45 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35567888888999999999999999999999998643
No 285
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.36 E-value=1.5 Score=43.22 Aligned_cols=102 Identities=9% Similarity=-0.046 Sum_probs=80.1
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC-C
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME-P 345 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~-p 345 (414)
+...-..+.+.|++++|...|.+..+. . -......|..+-.+|.+.|++++|.+.+++..+.. .
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~----g-----------~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~ 172 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAF----G-----------IQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVV 172 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHT----T-----------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHc----C-----------CCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 455667888999999999999876543 0 01234567788889999999999999999988653 3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHH
Q psy793 346 NNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQ 383 (414)
Q Consensus 346 ~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l--~P~~~~ 383 (414)
.+...|..+-.++...|++++|.+.|++..+. .|+...
T Consensus 173 Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T 212 (501)
T 4g26_A 173 PEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKST 212 (501)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHH
T ss_pred CCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHH
Confidence 37778889999999999999999999998764 465443
No 286
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.29 E-value=2.6 Score=40.01 Aligned_cols=86 Identities=8% Similarity=-0.036 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHhcCC--------C--C------------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy793 317 LLNMAAVQLKFKAYKRAINLCDDILLMEP--------N--N------------VKALFRRGRAQVSMNNFEQGLQDYEQA 374 (414)
Q Consensus 317 ~~nla~~~~~l~~~~~A~~~~~~al~~~p--------~--~------------~~a~~~~g~~~~~lg~~~~A~~~~~~a 374 (414)
+...|......++...|...+.+|+.+-. . . ..+...++.++..+|++++|+..++++
T Consensus 118 l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~ 197 (388)
T 2ff4_A 118 EKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEAL 197 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34444444556889999999999997731 1 1 124556788889999999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 375 LDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 375 l~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+..+|-+..++..+..++...+++.+..
T Consensus 198 ~~~~P~~E~~~~~lm~al~~~Gr~~~Al 225 (388)
T 2ff4_A 198 TFEHPYREPLWTQLITAYYLSDRQSDAL 225 (388)
T ss_dssp HHHSTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999887777766553
No 287
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=90.74 E-value=1.3 Score=32.16 Aligned_cols=37 Identities=14% Similarity=0.060 Sum_probs=31.1
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 298 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~ 298 (414)
..+..+..+|..+-+.|+|++|+.+|..|++++-...
T Consensus 14 ~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~al 50 (86)
T 4a5x_A 14 TAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 50 (86)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 4567788899999999999999999999999865433
No 288
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=89.69 E-value=8 Score=35.38 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHH-HHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC--HH------
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRK-YKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA--YK------ 331 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~-y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~--~~------ 331 (414)
.+....++...+.|.++++|++|++. |.-|+.++.... ...-..+-..+..+|.+.+. -+
T Consensus 30 YEAhQ~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q-----------~~sa~DLa~llvev~~~~~~~~~~~~~~rl 98 (312)
T 2wpv_A 30 YEAHQTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQ-----------GGSGTDLIFYLLEVYDLAEVKVDDISVARL 98 (312)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCC-----------cchHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 44556677788899999999999987 455555543211 11111111111122222111 00
Q ss_pred ------------HHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy793 332 ------------RAINLCDDILLM-------EPNNVKALFRRGRAQVSMNNFEQGLQDYE 372 (414)
Q Consensus 332 ------------~A~~~~~~al~~-------~p~~~~a~~~~g~~~~~lg~~~~A~~~~~ 372 (414)
.-....+++++. .-.++..|..+|..+..-+++.+|...|-
T Consensus 99 ~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 99 VRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp HHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 112233333322 22467788889999999999999988774
No 289
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=87.84 E-value=1.7 Score=42.73 Aligned_cols=82 Identities=11% Similarity=-0.032 Sum_probs=71.2
Q ss_pred HHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 263 VIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 263 ~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
....+...|....-+..+..|..+|.+|+.+ .|.....|.-+|.+....++.-+|+-+|.++|.
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~----------------~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQL----------------VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----------------CTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHh----------------CCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 3456778999999999999999999999999 677778999999999999999999999999998
Q ss_pred cCCCCHHHHHHHHHHHHH
Q psy793 343 MEPNNVKALFRRGRAQVS 360 (414)
Q Consensus 343 ~~p~~~~a~~~~g~~~~~ 360 (414)
.....+.|.-++...+..
T Consensus 215 ~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 215 VKFPFPAASTNLQKALSK 232 (497)
T ss_dssp SSBCCHHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHHHHH
Confidence 877788888777776654
No 290
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=87.44 E-value=11 Score=31.12 Aligned_cols=81 Identities=12% Similarity=0.141 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----------------hC
Q psy793 316 ALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD-----------------LL 378 (414)
Q Consensus 316 ~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~-----------------l~ 378 (414)
-.+-++..+.-.|+|..|+-.+- .-+...+.|..+.||..+++|..|+..+++.++ ++
T Consensus 35 Y~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd 109 (242)
T 3kae_A 35 YRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVD 109 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCC
T ss_pred HHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeec
Confidence 33456677778999998875432 335678899999999999999999999999993 34
Q ss_pred CCCHHHH-HHHHHHHHHHHHHHHH
Q psy793 379 PNDQQIL-KEIAFVRKQMRHHLNL 401 (414)
Q Consensus 379 P~~~~~~-~~l~~~~~~~~~~~~~ 401 (414)
|.|.+.. ..++.+..+.+..++.
T Consensus 110 ~~DkEfFy~l~a~lltq~g~r~Ea 133 (242)
T 3kae_A 110 PGDEEFFESLLGDLCTLSGYREEG 133 (242)
T ss_dssp TTCHHHHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHHHHHHhcCHHHh
Confidence 6676654 4556666666555554
No 291
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.51 E-value=3.7 Score=42.40 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
..|.++|..+++.++++.|+.+|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 46777777777788887777777765
No 292
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=84.46 E-value=9.8 Score=31.59 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=41.7
Q ss_pred HHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 324 QLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 324 ~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
.+++|+++.|.+.++.. ++...|-++|......|+++-|..+|+++-.
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 35789999999988765 5788999999999999999999999998743
No 293
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=83.92 E-value=2.3 Score=43.94 Aligned_cols=18 Identities=6% Similarity=-0.088 Sum_probs=11.5
Q ss_pred HHHHcCCHHHHHHHHHHH
Q psy793 357 AQVSMNNFEQGLQDYEQA 374 (414)
Q Consensus 357 ~~~~lg~~~~A~~~~~~a 374 (414)
++..+|++++|++.|.++
T Consensus 745 ~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 745 AYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHTCHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHc
Confidence 455567777777766554
No 294
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=83.48 E-value=7.7 Score=30.89 Aligned_cols=53 Identities=9% Similarity=-0.068 Sum_probs=39.3
Q ss_pred HhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 326 KFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 326 ~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
..++-++--+.+...+.-++.++..++.+|.+|.++|+..+|.+.+.+|.+.-
T Consensus 103 ~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 103 IQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 34444444444444455567789999999999999999999999999998854
No 295
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=83.45 E-value=24 Score=32.87 Aligned_cols=118 Identities=11% Similarity=0.091 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHhhhHHhhhc---------CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhC
Q psy793 259 QMEDVIRTIKNSGNEYFKLN---------RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKA 329 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~---------~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~ 329 (414)
-..+.+..+++.|-.+.+.+ ..+.|..+|++|--++...........-.++.+....++..++.+.-+.--
T Consensus 112 l~fE~a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~ 191 (363)
T 3rau_A 112 IKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQAYSVDMSRQILTLNVNLMLGQAQECL 191 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHCCSCSSGGGSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 35677888888888886543 468899999999887754432211111223344445555555444333333
Q ss_pred HHHHH-----------------HHHHHHHhcC---C----------C------------CHHHHHHHHHHHHHcCCHHHH
Q psy793 330 YKRAI-----------------NLCDDILLME---P----------N------------NVKALFRRGRAQVSMNNFEQG 367 (414)
Q Consensus 330 ~~~A~-----------------~~~~~al~~~---p----------~------------~~~a~~~~g~~~~~lg~~~~A 367 (414)
|.+|+ .+|++|...- + . .+.|+|+.|......+++-+|
T Consensus 192 ~~Kai~~~~k~~liAkLa~q~~~~Y~~a~~~l~~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~Gea 271 (363)
T 3rau_A 192 LEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQKFGER 271 (363)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhHHHH
Confidence 33332 2333332210 0 0 134677777777777888888
Q ss_pred HHHHHHHHh
Q psy793 368 LQDYEQALD 376 (414)
Q Consensus 368 ~~~~~~al~ 376 (414)
+..++.|.+
T Consensus 272 Ia~L~~A~~ 280 (363)
T 3rau_A 272 VAYFQSALD 280 (363)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 887777665
No 296
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.83 E-value=2.2 Score=41.93 Aligned_cols=71 Identities=7% Similarity=0.036 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC--CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLMEP--NN---VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQ 382 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p--~~---~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~ 382 (414)
....++.-+-..|+..+.|+.|.....++.--.. .+ ..-+|..|.++..+++|.+|..++..|+...|.+.
T Consensus 229 ~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 229 TKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 3356777788899999999999999999953221 12 34567789999999999999999999999988653
No 297
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=81.54 E-value=13 Score=27.02 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=33.2
Q ss_pred HHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC
Q psy793 261 EDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS 300 (414)
Q Consensus 261 ~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~ 300 (414)
+..|..+--++..+.+.|.|++||++..+|..++...-..
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkl 51 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKL 51 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3457778889999999999999999999999987654433
No 298
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.54 E-value=13 Score=28.44 Aligned_cols=77 Identities=10% Similarity=0.090 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccC------CcHHHHHhhHHHHHHHHHHHHHHHHHhhCH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQS------QSKTQQKHFRSYYTAALLNMAAVQLKFKAY 330 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~------~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 330 (414)
.....+.|..+.+.|...=..|+-+.|+.+|++.|..+...... ...+.+.....+......||..+..+++..
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~L 94 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEIL 94 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899998888999999999999999988644321 235566666667777778888887777655
Q ss_pred HHH
Q psy793 331 KRA 333 (414)
Q Consensus 331 ~~A 333 (414)
...
T Consensus 95 e~~ 97 (116)
T 2dl1_A 95 EKG 97 (116)
T ss_dssp HHH
T ss_pred Hhc
Confidence 443
No 299
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=80.34 E-value=12 Score=30.96 Aligned_cols=27 Identities=15% Similarity=0.012 Sum_probs=16.7
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHH
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVR 292 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~ 292 (414)
.++..|...+..|+++-|..+|.++=.
T Consensus 36 ~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 36 TWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 356666666666666666666655443
No 300
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=80.24 E-value=15 Score=34.61 Aligned_cols=118 Identities=16% Similarity=0.161 Sum_probs=68.2
Q ss_pred HHHHHHHHHHhhhHHhhhc------------CHHHHHHHHHHHHHHHHhhccCCcH------HHHHhhHHHHHHHHHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLN------------RMHDAQRKYKKAVRYIKWYNQSQSK------TQQKHFRSYYTAALLNMA 321 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~------------~~~~A~~~y~~Al~~~~~~~~~~~~------~~~~~~~~~~~~~~~nla 321 (414)
..+.+..+++.|-.+.+.+ ..+.|..+|++|--++......... +...++.+....++..++
T Consensus 110 ~fE~a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~Dls~~~l~~L~~l~ 189 (376)
T 3r9m_A 110 VFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYVIQC 189 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTSTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccCHHHHHHHHHHH
Confidence 5567788888777765432 3688889999998777543321110 112233455555555555
Q ss_pred HHHHHhhCHHHHH-----------------HHHHHHHhc-CC-------C------------CHHHHHHHHHHHHHcCCH
Q psy793 322 AVQLKFKAYKRAI-----------------NLCDDILLM-EP-------N------------NVKALFRRGRAQVSMNNF 364 (414)
Q Consensus 322 ~~~~~l~~~~~A~-----------------~~~~~al~~-~p-------~------------~~~a~~~~g~~~~~lg~~ 364 (414)
.+.-+.--|.+|+ ++|++|... .. . .+.|+|+.|..+...+++
T Consensus 190 LAQAQE~~~~Kai~~~~k~~liAKLa~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~k~ 269 (376)
T 3r9m_A 190 QAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASDKC 269 (376)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 4433332233222 244444432 11 0 145777888888888999
Q ss_pred HHHHHHHHHHHhh
Q psy793 365 EQGLQDYEQALDL 377 (414)
Q Consensus 365 ~~A~~~~~~al~l 377 (414)
-+|+..++.|.+.
T Consensus 270 GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 270 GEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9988888887664
No 301
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=80.00 E-value=6.3 Score=28.39 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=29.7
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRY 293 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~ 293 (414)
..++.+...|..+|+.++|.+|+..++++..+
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 56888999999999999999999999999976
No 302
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=79.67 E-value=15 Score=35.47 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHH
Q psy793 281 HDAQRKYKKAVRYIK 295 (414)
Q Consensus 281 ~~A~~~y~~Al~~~~ 295 (414)
+.|+.+|++|+.+++
T Consensus 449 ~kAi~~Y~~Ai~~L~ 463 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQ 463 (526)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555555544
No 303
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=78.85 E-value=8.6 Score=31.09 Aligned_cols=81 Identities=10% Similarity=0.101 Sum_probs=59.9
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+..-+. +...++.+.|...|+.|+.+ ......+|...|.--.+.++...|...+.+|+.+
T Consensus 61 I~LWIrYA~-~~ei~D~d~aR~vy~~a~~~----------------hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~ 123 (161)
T 4h7y_A 61 ARIQVRFAE-LKAIQEPDDARDYFQMARAN----------------CKKFAFVHISFAQFELSQGNVKKSKQLLQKAVER 123 (161)
T ss_dssp HHHHHHHHH-HHHHHCGGGCHHHHHHHHHH----------------CTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-HHHhcCHHHHHHHHHHHHHH----------------hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhcc
Confidence 444444442 24558999999999999986 2234888999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcC
Q psy793 344 EPNNVKALFRRGRAQVSMN 362 (414)
Q Consensus 344 ~p~~~~a~~~~g~~~~~lg 362 (414)
.|... -++..|..-+..|
T Consensus 124 ~~k~~-~~le~a~~nl~~~ 141 (161)
T 4h7y_A 124 GAVPL-EMLEIALRNLNLQ 141 (161)
T ss_dssp TCBCH-HHHHHHHHHHHTT
T ss_pred CCCcH-HHHHHHHHhhhcC
Confidence 98644 3445555544444
No 304
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=78.60 E-value=22 Score=34.14 Aligned_cols=88 Identities=7% Similarity=0.049 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc----CCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCCH
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM----EPNN--VKALFRRGRAQVSMNNFEQGLQDYEQALD---LLPNDQ 382 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~----~p~~--~~a~~~~g~~~~~lg~~~~A~~~~~~al~---l~P~~~ 382 (414)
....+...+|..|...|+|.+|...+.....- .... ...+......+...++|..|...++++.. -.+..+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 35667788999999999999999998887632 2222 34667778889999999999999999753 245555
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy793 383 QILKEIAFVRKQMRHHL 399 (414)
Q Consensus 383 ~~~~~l~~~~~~~~~~~ 399 (414)
.....+..+...+...+
T Consensus 215 ~lk~~~~~~~~~~~~~e 231 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHK 231 (445)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 55555555544444433
No 305
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.83 E-value=5.1 Score=43.76 Aligned_cols=106 Identities=9% Similarity=0.038 Sum_probs=73.0
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCc-HHHHHhh------HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQS-KTQQKHF------RSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~-~~~~~~~------~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
+-+|..++..|++++|..+|.+|-.-+........ ....... .......|+.+...+.+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 56899999999999999999888543221111111 1111111 1112345777888888999999999999999
Q ss_pred HhcCCCC-H----HHHHHHHHHHHHcCCHHHHHHHHHH
Q psy793 341 LLMEPNN-V----KALFRRGRAQVSMNNFEQGLQDYEQ 373 (414)
Q Consensus 341 l~~~p~~-~----~a~~~~g~~~~~lg~~~~A~~~~~~ 373 (414)
|+..+.+ . ..|.++=.++..+++|++|-..+-.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9875433 2 2567888899999999999776643
No 306
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=77.55 E-value=18 Score=38.74 Aligned_cols=102 Identities=5% Similarity=-0.189 Sum_probs=78.0
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
..+...-+.|++.|+.++|...+.+.-+..... -..++..|.-+-..|.+.|++++|++.+++-.+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG------------~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G 195 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKR------------KLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAG 195 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHH------------TTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcC------------CCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcC
Confidence 446777889999999999999997654431100 12245688888899999999999999999987653
Q ss_pred -CCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhC
Q psy793 345 -PNNVKALFRRGRAQVSMNN-FEQGLQDYEQALDLL 378 (414)
Q Consensus 345 -p~~~~a~~~~g~~~~~lg~-~~~A~~~~~~al~l~ 378 (414)
..|...|..+-.++.+.|+ .++|...|++..+..
T Consensus 196 ~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 196 LTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp CCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Confidence 3477788888888888887 578889998887643
No 307
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.31 E-value=4.4 Score=30.94 Aligned_cols=70 Identities=16% Similarity=0.272 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHHHHHHHHHHH
Q psy793 329 AYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPND----QQILKEIAFVRKQMRHHLNLEKM 404 (414)
Q Consensus 329 ~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~----~~~~~~l~~~~~~~~~~~~~~k~ 404 (414)
.|++|..+..+||.+|.. |.-..++.-|.+++..+++++.+..+- ...|.....++.++.+....-+.
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~ 89 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRT 89 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 477888888888888752 333444445566677777777776532 34555555555666655555444
Q ss_pred HH
Q psy793 405 TY 406 (414)
Q Consensus 405 ~~ 406 (414)
++
T Consensus 90 RL 91 (116)
T 2dl1_A 90 RL 91 (116)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 308
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=74.56 E-value=9.4 Score=38.57 Aligned_cols=53 Identities=4% Similarity=-0.056 Sum_probs=45.3
Q ss_pred HHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 324 QLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 324 ~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
.++.++|+.|...+.+.-.-.....++.|.+|.++..+|+-++|...|+++.+
T Consensus 295 Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 295 ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 45679999999998876654445688999999999999999999999999876
No 309
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.55 E-value=3.9 Score=39.30 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLMEP---NNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL--PNDQQILKEIA 389 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~p---~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~--P~~~~~~~~l~ 389 (414)
.++..+|..|.+.|++++|++.+.++..... .-...++....++...++|..|...+.++..+- ..++..+..+.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 4677899999999999999999999987643 235678888888999999999999999997763 33444444433
No 310
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=71.17 E-value=6.9 Score=27.25 Aligned_cols=37 Identities=8% Similarity=0.109 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRY 293 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~ 293 (414)
.++.++.-......|..++.+|++++|+.++.+||..
T Consensus 10 ~e~~e~~Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~V 46 (73)
T 3ax2_A 10 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAV 46 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 5566666777788999999999999999999999986
No 311
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=69.34 E-value=17 Score=26.65 Aligned_cols=38 Identities=8% Similarity=0.096 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYI 294 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~ 294 (414)
.+..++........|..++.+|+++.|+.+|.+||...
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 77788888888899999999999999999999999874
No 312
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=68.06 E-value=39 Score=36.27 Aligned_cols=95 Identities=9% Similarity=-0.123 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCCCHHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLM----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL--LPNDQQILKEI 388 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l--~P~~~~~~~~l 388 (414)
..|..+-.+|.+.|+.++|...+.+.-++ -..+...|.-+-..|...|++++|.+.|++..+. .|+-. ....+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvv-TYntL 206 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLL-SYAAA 206 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHH-HHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHH-HHHHH
Confidence 45667778999999999999999765432 2448889999999999999999999999998875 46543 34444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q psy793 389 AFVRKQMRHHLNLEKMTYARMF 410 (414)
Q Consensus 389 ~~~~~~~~~~~~~~k~~~~~~f 410 (414)
-.+..+.++..+...+.+..|-
T Consensus 207 I~glcK~G~~~e~A~~Ll~EM~ 228 (1134)
T 3spa_A 207 LQCMGRQDQDAGTIERCLEQMS 228 (1134)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHH
Confidence 4455544433333334555553
No 313
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=66.96 E-value=18 Score=25.17 Aligned_cols=37 Identities=19% Similarity=0.431 Sum_probs=24.0
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q psy793 353 RRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIA 389 (414)
Q Consensus 353 ~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 389 (414)
.+|..+...|++++|...|-+|+.+.|+=......+.
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q 58 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQ 58 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4566677777777777777777777766555444443
No 314
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=65.76 E-value=16 Score=37.28 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 347 NVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 347 ~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
...+...+|...+..|+|..|......++..+|+|.+++..++.++.+++.+.+
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~~ 501 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE 501 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 355678889999999999999999999999999999999999999999887754
No 315
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=65.56 E-value=17 Score=34.39 Aligned_cols=117 Identities=10% Similarity=0.065 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhhHHhhhc------CHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLN------RMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRA 333 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~------~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A 333 (414)
..+.+..+++.|-.+.+.+ ..+.|..+|++|--++...........-.++.+....++..++.+.-+.--|.+|
T Consensus 119 ~fE~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~l~~~~~~~~~~Dls~~~l~~L~~l~LAQAQE~~~~Ka 198 (392)
T 1zb1_A 119 AFEKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLSENFLNSPSVDLQSENTRFLANICHAEAQELFVLKL 198 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666665554322 5789999999998887644322211122233444555555444443332222222
Q ss_pred H--------------------HHHHHHHhc---CC----C-----------------CHHHHHHHHHHHHHcCCHHHHHH
Q psy793 334 I--------------------NLCDDILLM---EP----N-----------------NVKALFRRGRAQVSMNNFEQGLQ 369 (414)
Q Consensus 334 ~--------------------~~~~~al~~---~p----~-----------------~~~a~~~~g~~~~~lg~~~~A~~ 369 (414)
+ ++|+.|++. .+ + .+.|+|+.|..+...+++-+|+.
T Consensus 199 i~~~~~~~k~~liAkLa~~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa 278 (392)
T 1zb1_A 199 LNDQISSKQYTLISKLSRATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGEAIA 278 (392)
T ss_dssp TTSTTGGGCHHHHHHHHHHHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHH
T ss_pred HhccccCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 2 234444321 21 0 02356777777777788888888
Q ss_pred HHHHHHh
Q psy793 370 DYEQALD 376 (414)
Q Consensus 370 ~~~~al~ 376 (414)
.++.|.+
T Consensus 279 ~L~~A~~ 285 (392)
T 1zb1_A 279 FLDFSMQ 285 (392)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887764
No 316
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=64.64 E-value=1.3 Score=36.76 Aligned_cols=24 Identities=67% Similarity=1.053 Sum_probs=20.5
Q ss_pred cccccccchhcchhhhHhhcCCCC
Q psy793 103 KLKVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 103 ~~~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
++.|....|||+++.+++|+||+.
T Consensus 51 ~~~Y~g~~FhRvi~~f~iQgGd~~ 74 (170)
T 1qng_A 51 NLHYKNSIFHRIIPQFMCQGGDIT 74 (170)
T ss_dssp EECCTTCBCCEEETTTEEEECCTT
T ss_pred cceECCCEEEEEECCCEEEcCCcc
Confidence 345778899999999999999865
No 317
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=62.92 E-value=1.5 Score=38.74 Aligned_cols=65 Identities=9% Similarity=0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQ 324 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~ 324 (414)
....|..+..+|..+=+.|+|++|+.+|..|++++-.....+..+.....-...+.-|+++|..+
T Consensus 19 ~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~L 83 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENI 83 (257)
T ss_dssp -----------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 34557778889999999999999999999999987554433332222222233444566666543
No 318
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=62.57 E-value=1.6 Score=36.39 Aligned_cols=22 Identities=64% Similarity=1.067 Sum_probs=19.4
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
-|....|||++|.+++|+||+.
T Consensus 54 ~Y~g~~FhRvi~~f~iQgGd~~ 75 (173)
T 2igv_A 54 HFKGSKFHRIIPNFMIQGGDFT 75 (173)
T ss_dssp CCTTCBCCEEETTTEEEECCTT
T ss_pred eECCCEEEEEECCCEEEcCCCC
Confidence 4677899999999999999875
No 319
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=62.42 E-value=1.5 Score=36.62 Aligned_cols=22 Identities=50% Similarity=0.854 Sum_probs=19.2
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
.|....|||++|.+++|+||+.
T Consensus 59 ~Y~g~~FhRvi~~f~iQgGd~~ 80 (177)
T 1mzw_A 59 GYKGSTFHRVIKDFMIQGGDFV 80 (177)
T ss_dssp SSTTCBCCEEETTTEEEECCTT
T ss_pred eECCCEEEEEECCCEEEcCCcc
Confidence 3667899999999999999865
No 320
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=62.14 E-value=1.6 Score=36.77 Aligned_cols=24 Identities=67% Similarity=1.110 Sum_probs=20.6
Q ss_pred cccccccchhcchhhhHhhcCCCC
Q psy793 103 KLKVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 103 ~~~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
++.|....|||+++.|++|+||+.
T Consensus 68 ~~~Y~g~~FhRVi~~f~iQgGd~~ 91 (186)
T 2poy_A 68 PLCYTGSFFHRIIPQFMIQGGDFT 91 (186)
T ss_dssp BSCCTTCBCCEEETTTEEEECCTT
T ss_pred cceECCCEEEEEeCCCEEEeCCCC
Confidence 445778899999999999999865
No 321
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=61.38 E-value=17 Score=35.16 Aligned_cols=67 Identities=7% Similarity=0.127 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcC--------CC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLME--------PN--NVKALFRRGRAQVSMNNFEQGLQDYEQALDL-LPND 381 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~--------p~--~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l-~P~~ 381 (414)
-+-.++..+|+++++..-|...++..-... |. .+.-+|.+|..++..++|.+|.+.+..|++. .|.+
T Consensus 177 ~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 177 YLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 345567789999999888877664432211 21 2456789999999999999999999999998 7755
No 322
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=60.87 E-value=1.7 Score=36.36 Aligned_cols=22 Identities=55% Similarity=0.914 Sum_probs=19.1
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
-|....|||++|.+++|+||++
T Consensus 58 ~Y~g~~FhRvi~~f~iQgGd~~ 79 (177)
T 1a58_A 58 HYKGSTFHRVIKNFMIQGGDFT 79 (177)
T ss_dssp CCTTCBEEEEETTTEEEECCCS
T ss_pred eeCCCEEEEEECCCEEEeCCcc
Confidence 3567889999999999999875
No 323
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=60.27 E-value=1.7 Score=35.60 Aligned_cols=21 Identities=43% Similarity=0.722 Sum_probs=17.8
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||++
T Consensus 42 Y~g~~fhRvi~~f~iQgGd~~ 62 (160)
T 2fu0_A 42 YNNCIFHRVIKHFMVQTGDPS 62 (160)
T ss_dssp TTTCBCCEEETTTEEEECCTT
T ss_pred cCCCEEEEEECCCEEEeCCcC
Confidence 446789999999999999854
No 324
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=60.15 E-value=44 Score=23.88 Aligned_cols=26 Identities=27% Similarity=0.451 Sum_probs=15.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 352 FRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 352 ~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
...|.-.-..|+|++|+..|..++++
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34444455667777776666666653
No 325
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=59.86 E-value=6.9 Score=31.67 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=24.7
Q ss_pred EEEeeCCeeeeeEEEEEcCCcchhhHHHHHHhh
Q psy793 15 LDVSIGEEKVGRMVIELFKHIVPKTAENFRALC 47 (414)
Q Consensus 15 ~~~~~~~~~~G~i~ieL~~~~aP~~~~nF~~l~ 47 (414)
+.+.+++ ..++++|+.+.||+||+.|+++-
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTC
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhC
Confidence 4445554 67999999999999999999876
No 326
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=58.30 E-value=1.9 Score=36.16 Aligned_cols=22 Identities=45% Similarity=0.892 Sum_probs=19.2
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
-|....|||+++.+++|+||++
T Consensus 61 ~Y~g~~FhRvi~~f~iQgGd~~ 82 (179)
T 2wfi_A 61 HYKSCLFHRVVKDFMVQGGDFS 82 (179)
T ss_dssp CCTTCBEEEEETTTEEEECCTT
T ss_pred eECCCEEEEEECCCEEEccccc
Confidence 3567899999999999999865
No 327
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=57.76 E-value=1.9 Score=35.54 Aligned_cols=21 Identities=62% Similarity=0.892 Sum_probs=18.1
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||++
T Consensus 48 Y~g~~fhRvi~~f~iQgGd~~ 68 (166)
T 2x7k_A 48 YNGTKFHRIIKDFMIQGGDPT 68 (166)
T ss_dssp TTTEECCEEETTTEEEECCTT
T ss_pred CCCCEEEEEECCCEEEcCCCC
Confidence 457889999999999999854
No 328
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=57.74 E-value=1.9 Score=35.82 Aligned_cols=21 Identities=57% Similarity=0.977 Sum_probs=18.5
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||++|.+++|+||+.
T Consensus 55 Y~g~~FhRvi~~f~iQgGd~~ 75 (172)
T 2cmt_A 55 YHNCCFHRVIPQFMCQGGDFV 75 (172)
T ss_dssp STTCBEEEEETTTEEEECCTT
T ss_pred ECCCEEEEEECCCEEEcCCcc
Confidence 557789999999999999865
No 329
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=57.64 E-value=2.1 Score=35.77 Aligned_cols=21 Identities=57% Similarity=0.762 Sum_probs=18.0
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||+.
T Consensus 58 Y~g~~FhRvi~~f~iQgGd~~ 78 (176)
T 2a2n_A 58 YNGHTFHRIIKGFMIQTGDPT 78 (176)
T ss_dssp TTTCBCCEEETTTEEEECCTT
T ss_pred cCCCEEEEEECCcEEEccCCC
Confidence 456789999999999999854
No 330
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=56.70 E-value=43 Score=31.04 Aligned_cols=64 Identities=11% Similarity=0.171 Sum_probs=47.3
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHH
Q psy793 333 AINLCDDILLM-----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 333 A~~~~~~al~~-----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~ 396 (414)
++..+.+|+.. +-.....|..+|-.+++.+++.+|+..+-.|-.. .-+|.++.+++-.+...+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneli 350 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIANDLI 350 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHh
Confidence 45555555543 3446778888999999999999999999988764 3467888888877765543
No 331
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=56.47 E-value=2.1 Score=35.65 Aligned_cols=21 Identities=67% Similarity=1.062 Sum_probs=18.5
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||++
T Consensus 56 Y~g~~FhRvi~~f~iQgGd~~ 76 (173)
T 2r99_A 56 FKGSSFHRIIPQFMCQGGDFT 76 (173)
T ss_dssp STTCBEEEEETTTEEEECCTT
T ss_pred ecCCEEEEeeCCCEEEeCCcC
Confidence 556789999999999999866
No 332
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=56.19 E-value=2.2 Score=34.97 Aligned_cols=21 Identities=48% Similarity=0.602 Sum_probs=17.8
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||+.
T Consensus 37 Y~g~~fhRvi~~f~iQgGd~~ 57 (161)
T 2ok3_A 37 YNGCIFHRNIKGFMVQTGDPT 57 (161)
T ss_dssp TTTCBCCEEETTTEEEECCTT
T ss_pred cCCCEEEEEECCCEEecCCCC
Confidence 446789999999999999854
No 333
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=56.08 E-value=13 Score=36.50 Aligned_cols=73 Identities=12% Similarity=0.057 Sum_probs=54.6
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
+..+...=..|+..+.|++|...-.++.- +... .+ +......++.+|.++.-.++|.+|.+++..|+..
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~f--P~~~--~s-------n~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rk 299 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEY--PHTD--VS-------SSLEARYFFYLSKINAIQLDYSTANEYIIAAIRK 299 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCS--CTTT--SC-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcC--Cccc--CC-------HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 44455566678888888888888877741 1110 01 3456778889999999999999999999999998
Q ss_pred CCCC
Q psy793 344 EPNN 347 (414)
Q Consensus 344 ~p~~ 347 (414)
.|.+
T Consensus 300 ap~~ 303 (523)
T 4b4t_S 300 APHN 303 (523)
T ss_dssp CSCS
T ss_pred CCcc
Confidence 7755
No 334
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=55.55 E-value=2.2 Score=36.14 Aligned_cols=22 Identities=45% Similarity=0.834 Sum_probs=19.3
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
-|....|||++|.|++|+||+.
T Consensus 71 ~Y~g~~FhRVi~~fmiQgGd~~ 92 (192)
T 2he9_A 71 CYKGSTFHRVVKNFMIQGGDFS 92 (192)
T ss_dssp CCTTCBEEEEETTTEEEECCTT
T ss_pred eECCCEEEEEECCCEEEcCccc
Confidence 3668899999999999999875
No 335
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=55.48 E-value=2.1 Score=36.22 Aligned_cols=21 Identities=52% Similarity=0.759 Sum_probs=18.6
Q ss_pred cccccchhcchhhhHhhcCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDI 125 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~ 125 (414)
-|....|||+++.|++|+||+
T Consensus 74 ~Y~g~~FhRVi~~fmiQgGd~ 94 (191)
T 1w74_A 74 FYDGAVFHRVIQGFMIQGGDP 94 (191)
T ss_dssp SSTTEEEEEEETTTEEEECCT
T ss_pred ccCCCEEEEEeCCCEEecCCC
Confidence 367889999999999999984
No 336
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=55.38 E-value=2.2 Score=35.17 Aligned_cols=21 Identities=52% Similarity=0.893 Sum_probs=18.5
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||++|.+++|+||+.
T Consensus 48 Y~g~~fhRvi~~f~iQgGd~~ 68 (165)
T 2z6w_A 48 YKGSTFHRVIPSFMCQAGDFT 68 (165)
T ss_dssp STTCBEEEEETTTEEEECCTT
T ss_pred CcCCEEEEEECCCEEEeCCcc
Confidence 556789999999999999875
No 337
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=54.57 E-value=32 Score=24.47 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=6.6
Q ss_pred HcCCHHHHHHHHHHHH
Q psy793 360 SMNNFEQGLQDYEQAL 375 (414)
Q Consensus 360 ~lg~~~~A~~~~~~al 375 (414)
..|+|++|+..|+.++
T Consensus 31 ~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 31 KEGNAEEAITNYKKAI 46 (83)
T ss_dssp HTTCHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHH
Confidence 3344444444444333
No 338
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=54.34 E-value=67 Score=32.85 Aligned_cols=118 Identities=10% Similarity=0.046 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHhhhHHhhhc---------CHHHHHHHHHHHHHHHHhhccCC----cHHHHHhhHHHHHHHHHHHHHHHH
Q psy793 259 QMEDVIRTIKNSGNEYFKLN---------RMHDAQRKYKKAVRYIKWYNQSQ----SKTQQKHFRSYYTAALLNMAAVQL 325 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~---------~~~~A~~~y~~Al~~~~~~~~~~----~~~~~~~~~~~~~~~~~nla~~~~ 325 (414)
-..+.+..+++.|-.+...+ ..+.|..+|.+|--++....... ....-..+.+....++.+++.+.-
T Consensus 122 l~fE~a~vLfNlaal~s~~A~~~~r~~~~~lK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQA 201 (704)
T 2xs1_A 122 LGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQA 201 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCHHHHHHHHHHHHHHH
Confidence 35567888888877665422 36788889988887765332110 001112334555555555554433
Q ss_pred HhhCHHHHHH-----------------HHHHHHhc-------CCCC------------HHHHHHHHHHHHHcCCHHHHHH
Q psy793 326 KFKAYKRAIN-----------------LCDDILLM-------EPNN------------VKALFRRGRAQVSMNNFEQGLQ 369 (414)
Q Consensus 326 ~l~~~~~A~~-----------------~~~~al~~-------~p~~------------~~a~~~~g~~~~~lg~~~~A~~ 369 (414)
+..-|.+|+. +|+.|+.. .+.+ +.|+|+.|..+...+++-+|+.
T Consensus 202 QE~~~~Kai~~~~k~~liAkLa~~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa 281 (704)
T 2xs1_A 202 QEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIA 281 (704)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHH
Confidence 3222222222 23333321 1111 3366777777777888999998
Q ss_pred HHHHHHh
Q psy793 370 DYEQALD 376 (414)
Q Consensus 370 ~~~~al~ 376 (414)
.++.|.+
T Consensus 282 ~L~~A~~ 288 (704)
T 2xs1_A 282 RLQHAAE 288 (704)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888765
No 339
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=54.11 E-value=12 Score=30.80 Aligned_cols=32 Identities=13% Similarity=0.381 Sum_probs=24.4
Q ss_pred EEEEeeCCeeee-eEEEEEcCCcchhhHHHHHHhh
Q psy793 14 FLDVSIGEEKVG-RMVIELFKHIVPKTAENFRALC 47 (414)
Q Consensus 14 ~~~~~~~~~~~G-~i~ieL~~~~aP~~~~nF~~l~ 47 (414)
|+.|++.. .| .++.+|..+.||+||+.|+++-
T Consensus 23 ~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEEec--CCeEEEEEEccccChHHHHHHHHhC
Confidence 55566532 23 3789999999999999999875
No 340
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=53.50 E-value=62 Score=23.51 Aligned_cols=29 Identities=17% Similarity=0.058 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 313 YTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 313 ~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
.+..+..+|..+++.|+|++||++..+|.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 34556667777777777777777666554
No 341
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=53.26 E-value=2.7 Score=36.64 Aligned_cols=22 Identities=50% Similarity=0.880 Sum_probs=19.4
Q ss_pred cccccchhcchhhhHhhcCCCC
Q psy793 105 KVISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 105 ~~~~~~f~~~~~~~~~~~g~~~ 126 (414)
-|....|||+++.|++|+||+.
T Consensus 108 ~Y~gt~FHRVi~~FmiQgGD~~ 129 (229)
T 1z81_A 108 GYKNTIFHRVIKEFMIQGGDFI 129 (229)
T ss_dssp SSTTEECCEEETTTEEEECCTT
T ss_pred eECCCEEEEEeCCCEEEcCCCc
Confidence 4678899999999999999875
No 342
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=53.26 E-value=71 Score=29.84 Aligned_cols=118 Identities=11% Similarity=0.083 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhhhHHhhhc---------CHHHHHHHHHHHHHHHHhhccCC----cHHHHHhhHHHHHHHHHHHHHHHHH
Q psy793 260 MEDVIRTIKNSGNEYFKLN---------RMHDAQRKYKKAVRYIKWYNQSQ----SKTQQKHFRSYYTAALLNMAAVQLK 326 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~---------~~~~A~~~y~~Al~~~~~~~~~~----~~~~~~~~~~~~~~~~~nla~~~~~ 326 (414)
..+.+..+++.|-.+...+ ..+.|...|++|--++....... ....-.++.+....++.+++.+.-+
T Consensus 138 ~fE~a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQAQ 217 (380)
T 3c3r_A 138 GYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQAQ 217 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCTTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccCCHHHHHHHHHHHHHHHH
Confidence 4566788888777765422 26788888988887765332110 0001122344445555554444333
Q ss_pred hhCHHHHH-----------------HHHHHHH---hc----CCCC------------HHHHHHHHHHHHHcCCHHHHHHH
Q psy793 327 FKAYKRAI-----------------NLCDDIL---LM----EPNN------------VKALFRRGRAQVSMNNFEQGLQD 370 (414)
Q Consensus 327 l~~~~~A~-----------------~~~~~al---~~----~p~~------------~~a~~~~g~~~~~lg~~~~A~~~ 370 (414)
.--|.+|+ .+|+.|+ .. ++.. +.|+|+.|......+++-+|+..
T Consensus 218 E~~~~Kai~~~~k~~liAkLa~~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~ 297 (380)
T 3c3r_A 218 EVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIAR 297 (380)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 22232222 2233332 21 1111 33667778888888889888888
Q ss_pred HHHHHhh
Q psy793 371 YEQALDL 377 (414)
Q Consensus 371 ~~~al~l 377 (414)
++.|.+.
T Consensus 298 L~~A~~~ 304 (380)
T 3c3r_A 298 LQHAAEL 304 (380)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887653
No 343
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=53.06 E-value=2.6 Score=35.46 Aligned_cols=21 Identities=48% Similarity=0.934 Sum_probs=18.1
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||++
T Consensus 61 Y~g~~FhRvi~~f~iQgGd~~ 81 (185)
T 2hq6_A 61 YDNTIFHRVVPGFIVQGGDPT 81 (185)
T ss_dssp TTTEECCEEETTTEEEECCTT
T ss_pred cCCCEEEEEECCCEEEcCCCC
Confidence 457889999999999999854
No 344
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=53.03 E-value=2.6 Score=36.86 Aligned_cols=21 Identities=43% Similarity=0.944 Sum_probs=18.1
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||++
T Consensus 58 Ydgt~FhRVi~~FmiQgGdp~ 78 (232)
T 3bkp_A 58 YVNTIFHRVVKDFIVQGGDPT 78 (232)
T ss_dssp TTTCBEEEEETTTEEEECCTT
T ss_pred cCCCEEEEEeCCCEEEcCCCC
Confidence 446789999999999999864
No 345
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=52.72 E-value=2.6 Score=36.85 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=18.8
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.||+|+||+.
T Consensus 76 Y~gt~FHRVi~~FmiQgGd~~ 96 (234)
T 2ose_A 76 YEGCKFHNVLHNNYIVSGDIY 96 (234)
T ss_dssp STTCBCCEEETTTEEEECCCC
T ss_pred ECCcEEEEEECCCEEEcCCcc
Confidence 678899999999999999864
No 346
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=52.40 E-value=40 Score=29.02 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=48.4
Q ss_pred HHHHHHhhhHH-----hhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHH-HhhCHHHHHHHH
Q psy793 264 IRTIKNSGNEY-----FKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQL-KFKAYKRAINLC 337 (414)
Q Consensus 264 a~~~~~~G~~~-----~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~-~l~~~~~A~~~~ 337 (414)
+.-++-+|.-| |..|+-+.|...|+.|..+.... .....|....+.+|.+..|. -+++.++|+..+
T Consensus 120 VFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~--------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lA 191 (227)
T 2o8p_A 120 FFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEH--------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNML 191 (227)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHC--------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhh--------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 44455555433 34566889999999999885421 11125666777778777655 478899999998
Q ss_pred HHHHhc
Q psy793 338 DDILLM 343 (414)
Q Consensus 338 ~~al~~ 343 (414)
++|+.+
T Consensus 192 k~Afd~ 197 (227)
T 2o8p_A 192 NSLGKI 197 (227)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 347
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=52.26 E-value=2.6 Score=35.85 Aligned_cols=21 Identities=52% Similarity=0.756 Sum_probs=18.0
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||++
T Consensus 56 Ydg~~FhRVi~~f~iQgGd~~ 76 (197)
T 1zkc_A 56 YDGTIFHRSIRNFVIQGGDPT 76 (197)
T ss_dssp TTTEEEEEEETTTEEEECCTT
T ss_pred CCCCEEEEEeCCCEEEcCCCC
Confidence 456789999999999999854
No 348
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=51.83 E-value=2.9 Score=35.17 Aligned_cols=21 Identities=57% Similarity=0.950 Sum_probs=18.2
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||+.
T Consensus 57 Y~g~~FhRvi~~f~iQgGd~~ 77 (185)
T 4fru_A 57 YKDSKFHRVIKDFMIQGGDFT 77 (185)
T ss_dssp STTCBCCEEETTTEEEECCTT
T ss_pred EcCCEEEEeeCCCeEEECCCC
Confidence 456789999999999999875
No 349
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=51.69 E-value=30 Score=29.28 Aligned_cols=56 Identities=5% Similarity=-0.096 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHcCCHH
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFR-----RGRAQVSMNNFE 365 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~-----~g~~~~~lg~~~ 365 (414)
....+..++-+|..++-.++|.+|.+++..|+...|.......+ +-.+.+-+|++.
T Consensus 10 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 10 TAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45667788889999999999999999999999988866543333 233445567754
No 350
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=51.51 E-value=87 Score=25.36 Aligned_cols=58 Identities=5% Similarity=0.033 Sum_probs=43.6
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHhcCCCC------HHHHHH-HHHHHH--HcCCHHHHHHHHHHHHhh
Q psy793 320 MAAVQLKFKAYKRAINLCDDILLMEPNN------VKALFR-RGRAQV--SMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 320 la~~~~~l~~~~~A~~~~~~al~~~p~~------~~a~~~-~g~~~~--~lg~~~~A~~~~~~al~l 377 (414)
.+..++..++|=+|-+.++.+-...+.. .+++.. +|.++. ..|+...|...+++++..
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4455566799999999999998776554 345555 555544 559999999999999873
No 351
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=50.89 E-value=61 Score=22.72 Aligned_cols=51 Identities=14% Similarity=0.227 Sum_probs=29.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHH
Q psy793 351 LFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRHHLNL 401 (414)
Q Consensus 351 ~~~~g~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~~~~~ 401 (414)
...+|.=|..+|+|+.|+.+|+.+++. .-.|+..+..=..++.++.+..+.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~ei~~E~~~ 71 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVEAKQ 71 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHHHHHHHHH
Confidence 345666677777777777777777652 123555554445555555544443
No 352
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=50.86 E-value=2.6 Score=34.79 Aligned_cols=21 Identities=57% Similarity=0.972 Sum_probs=18.0
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||++
T Consensus 41 Y~g~~FhRvi~~f~iQgGd~~ 61 (166)
T 1v9t_A 41 YNNTTFHRVIPGFMIQGGGFT 61 (166)
T ss_dssp TTTCBEEEEETTTEEEESSBC
T ss_pred CCCCEEEEEECCcEEEcCCcC
Confidence 456789999999999999755
No 353
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=50.68 E-value=67 Score=23.14 Aligned_cols=70 Identities=10% Similarity=-0.001 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhhhHHhhh---cCHHHHHHHHHHHHHHHHhhccC---CcHHHHHhhHHHHHHHHHHHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKL---NRMHDAQRKYKKAVRYIKWYNQS---QSKTQQKHFRSYYTAALLNMAAVQLK 326 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~---~~~~~A~~~y~~Al~~~~~~~~~---~~~~~~~~~~~~~~~~~~nla~~~~~ 326 (414)
.....+.|..+.+.|...=.. |+-++|+.+|++.+..+...... ..-+++.....+......|+..+--+
T Consensus 9 ik~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~R 84 (89)
T 3eab_A 9 VRVFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDR 84 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888888888877 89999999999999887543311 12334444444444445555554433
No 354
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=50.59 E-value=2.6 Score=34.64 Aligned_cols=19 Identities=53% Similarity=0.885 Sum_probs=16.6
Q ss_pred ccccchhcchhhhHhhcCC
Q psy793 106 VISQYFHRIIPQFMIQGGD 124 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~ 124 (414)
|....|||+++.|++|+||
T Consensus 36 Y~g~~FhRvi~~f~iQgGd 54 (164)
T 1lop_A 36 YNNTIFHRVINGFMIQGGG 54 (164)
T ss_dssp TTTEECCEEETTTEEEESS
T ss_pred CCCCEEEEEeCCceEecCC
Confidence 4567899999999999995
No 355
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=50.57 E-value=3.1 Score=35.07 Aligned_cols=21 Identities=57% Similarity=0.956 Sum_probs=18.2
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||+.
T Consensus 60 Y~g~~FhRvi~~f~iQgGd~~ 80 (188)
T 3ich_A 60 YKNSKFHRVIKDFMIQGGDFT 80 (188)
T ss_dssp STTCBCCEEETTTEEEECCTT
T ss_pred ccCCEEEEEECCCEEEcCCcc
Confidence 556789999999999999854
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.33 E-value=23 Score=37.78 Aligned_cols=52 Identities=8% Similarity=0.144 Sum_probs=41.7
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy793 320 MAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQAL 375 (414)
Q Consensus 320 la~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al 375 (414)
++..++..+.++-| ...+..-|.++-.-|-+|.+|..+|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 44555666666644 45667788888888999999999999999999999876
No 357
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=49.66 E-value=42 Score=29.63 Aligned_cols=54 Identities=17% Similarity=0.186 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHh
Q psy793 280 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDILL 342 (414)
Q Consensus 280 ~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al~ 342 (414)
-+.|...|++|+.+. ..- ...+|....+.+|.+.-|.. +++.++|+..+++|+.
T Consensus 172 ~e~a~~aY~~A~~iA-~~L--------~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 172 AEDALKAYKDATVVA-KDL--------EPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHH-TTS--------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HhC--------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 357888899999885 211 11157777888888877666 7888888888887763
No 358
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=49.53 E-value=61 Score=28.09 Aligned_cols=55 Identities=15% Similarity=0.061 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHHh
Q psy793 280 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDILL 342 (414)
Q Consensus 280 ~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al~ 342 (414)
-+.|...|++|+.+....- ...+|....+.+|.+.-|.. +++.++|+..+++|+.
T Consensus 146 ~e~a~~aY~~A~~iA~~~L--------~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTEL--------PPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccC--------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3678889999998854211 11257788888888887666 8899999988888763
No 359
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=49.39 E-value=41 Score=24.11 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHH
Q psy793 258 NQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYI 294 (414)
Q Consensus 258 ~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~ 294 (414)
.+..+.|..+.+.|..++++|++..|+.++.-|--.+
T Consensus 29 ~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 65 (86)
T 2oo2_A 29 EGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWL 65 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 5678889999999999999999999999987776654
No 360
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=49.24 E-value=24 Score=24.89 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=27.8
Q ss_pred HHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhc
Q psy793 265 RTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYN 298 (414)
Q Consensus 265 ~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~ 298 (414)
......|..+...|+|+.|+.+|+.++..++...
T Consensus 13 ~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l 46 (78)
T 2rpa_A 13 VENVKLAREYALLGNYDSAMVYYQGVLDQMNKYL 46 (78)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 3455678888889999999999999999876544
No 361
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=49.19 E-value=3.5 Score=34.21 Aligned_cols=21 Identities=57% Similarity=0.975 Sum_probs=18.4
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||++|.+++|+||+.
T Consensus 56 Y~g~~FhRvi~~f~iQgGd~~ 76 (172)
T 2haq_A 56 YKDSIFHRVIQNFMIQGGDFT 76 (172)
T ss_dssp STTCBCCEEETTTEEEECCTT
T ss_pred cCCCEEEEEECCCEEecCCcc
Confidence 567889999999999999854
No 362
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=48.90 E-value=27 Score=33.46 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=56.1
Q ss_pred HHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHH-----H--HHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Q psy793 266 TIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKT-----Q--QKHFRSYYTAALLNMAAVQLKFKAYKRAINLCD 338 (414)
Q Consensus 266 ~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~ 338 (414)
-+..+++...+.++|-+|--++.....++.+........ . ..........+|...+..+.+-+.|+.|+..|+
T Consensus 37 ~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k 116 (436)
T 2yin_A 37 YLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCK 116 (436)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 345678899999999999998866555555443221000 0 000111223355556666667778999999988
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHc
Q psy793 339 DILLMEPNNVKALFRRGRAQVSM 361 (414)
Q Consensus 339 ~al~~~p~~~~a~~~~g~~~~~l 361 (414)
.++..-..+..-|-.++.++..+
T Consensus 117 ~L~~~yE~~~~Dy~~Ls~~~~~~ 139 (436)
T 2yin_A 117 ELAEQYEMEIFDYELLSQNLIQQ 139 (436)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 88865443323344555555544
No 363
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=48.26 E-value=2.2 Score=36.23 Aligned_cols=21 Identities=57% Similarity=0.975 Sum_probs=18.0
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||++
T Consensus 75 Y~g~~FhRVi~~f~iQgGd~~ 95 (196)
T 2b71_A 75 YDNTIFHRVIPNFVIQGGDPT 95 (196)
T ss_dssp TTTEEEEEEETTTEEEEEETT
T ss_pred cCCCEEEEEeCCcEEEcCCCC
Confidence 457889999999999999754
No 364
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=48.01 E-value=50 Score=27.84 Aligned_cols=33 Identities=15% Similarity=0.156 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy793 349 KALFRRGRAQVSMNNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 349 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~ 381 (414)
.-+|.+|..++..++|.+|.+.+..|++..|..
T Consensus 15 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 15 TYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 456677777777788888888888887777654
No 365
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=47.98 E-value=1.6e+02 Score=26.65 Aligned_cols=129 Identities=11% Similarity=-0.079 Sum_probs=84.4
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc---
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM--- 343 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~--- 343 (414)
...+-......|+|.+|...|+......-... .....+.+++.-|..+++.+++..|.+.+...++.
T Consensus 16 ~l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~~~----------~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~ 85 (312)
T 2wpv_A 16 TLQRFENKIKAGDYYEAHQTLRTIANRYVRSK----------SYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDL 85 (312)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccChHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHH
Confidence 33444556677889999999977665421111 13456678888999999999999998877666644
Q ss_pred --CCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Q psy793 344 --EPNNVKALFRRGRAQVSMNNFE-QGLQDYEQALDLL-------PNDQQILKEIAFVRKQMRHHLNLEKMT 405 (414)
Q Consensus 344 --~p~~~~a~~~~g~~~~~lg~~~-~A~~~~~~al~l~-------P~~~~~~~~l~~~~~~~~~~~~~~k~~ 405 (414)
.+-+....-++..++.....-+ .=.+..++|++.. -+++..+..++..+-.-++..+.++..
T Consensus 86 ~~~~~~~~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 86 AEVKVDDISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp TTCCCSHHHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 2345556667777666543222 1234455555432 258899999999988877776666543
No 366
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=47.93 E-value=3.5 Score=33.87 Aligned_cols=21 Identities=62% Similarity=1.111 Sum_probs=18.2
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||++|.+++|+||+.
T Consensus 47 Y~g~~fhRvi~~f~iQgGd~~ 67 (164)
T 3pmp_A 47 YKDSIFHRVIPQFMLQGGDFT 67 (164)
T ss_dssp STTCBEEEEETTTEEEECCTT
T ss_pred ccCCEEEEEECCCeEEeCCCC
Confidence 456789999999999999864
No 367
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=47.78 E-value=45 Score=24.00 Aligned_cols=38 Identities=5% Similarity=-0.035 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHH
Q psy793 257 LNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYI 294 (414)
Q Consensus 257 ~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~ 294 (414)
..+..+.|..+.+.|..++++|++..|+.++.-|--.+
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~GwL 69 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHGLL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 56788899999999999999999999999987666553
No 368
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=47.52 E-value=74 Score=31.97 Aligned_cols=122 Identities=5% Similarity=-0.160 Sum_probs=73.5
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCC
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLMEPNN 347 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~ 347 (414)
...+...+.+++.+.|...|.+...... . + ......++..+|.-++..+...++...+.++.....++
T Consensus 218 ~~~~~~rlar~d~~~A~~~~~~~~~~~~-~----~-------~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (618)
T 1qsa_A 218 AAVAFASVARQDAENARLMIPSLAQAQQ-L----N-------EDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQST 285 (618)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTT-C----C-------HHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHhcCHHHHHHHHHhhhhccC-C----C-------HHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCCh
Confidence 3344555566688888888866554210 0 1 22233344445555555553556666777766554443
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 348 VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 348 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
...-.+.+. .+..++++.|...|++.-.-........+.++++....++..+.+
T Consensus 286 ~~~e~~~r~-Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~ 339 (618)
T 1qsa_A 286 SLIERRVRM-ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAK 339 (618)
T ss_dssp HHHHHHHHH-HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHH-HHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHH
Confidence 333333344 446799999999998765544456788899999887776665543
No 369
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=47.49 E-value=41 Score=26.82 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHH
Q psy793 255 VQLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 295 (414)
Q Consensus 255 ~~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~ 295 (414)
.++...++.+..+...|..|...|+.+.|...|.+.+.++-
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~ 71 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFI 71 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 34788899999999999999999999999999999988863
No 370
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=47.25 E-value=1.2e+02 Score=29.24 Aligned_cols=47 Identities=15% Similarity=0.125 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 330 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~--------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
|+..+++++.|+..=|. -.-|+--+|.+|+.+++|++|++..++++.
T Consensus 154 y~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 154 WAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 67778888888765442 133677789999999999999999998874
No 371
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=47.13 E-value=30 Score=25.34 Aligned_cols=29 Identities=14% Similarity=0.384 Sum_probs=17.8
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q psy793 353 RRGRAQVSMNNFEQGLQDYEQALDLLPND 381 (414)
Q Consensus 353 ~~g~~~~~lg~~~~A~~~~~~al~l~P~~ 381 (414)
.+|..+...|+++.|+..|-+|+.+.|+=
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 34666666666666666666666666553
No 372
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=46.94 E-value=43 Score=23.71 Aligned_cols=15 Identities=20% Similarity=0.381 Sum_probs=6.7
Q ss_pred HHHHHHHHHhhCCCC
Q psy793 367 GLQDYEQALDLLPND 381 (414)
Q Consensus 367 A~~~~~~al~l~P~~ 381 (414)
|+..|.++++..|+.
T Consensus 37 aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 37 AIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCH
Confidence 334444444445544
No 373
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=46.30 E-value=3.3 Score=35.32 Aligned_cols=21 Identities=62% Similarity=0.892 Sum_probs=18.3
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||+.
T Consensus 48 Ydg~~FhRVi~~F~iQgGd~~ 68 (203)
T 2k7n_A 48 YNGTKFHRIIKDFMIQGGDPT 68 (203)
T ss_dssp GGGCEEEEEETTTEEEEECSS
T ss_pred cCCCEEEEEeCCcEEEcCCCC
Confidence 457889999999999999854
No 374
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=46.22 E-value=2.4 Score=35.62 Aligned_cols=21 Identities=48% Similarity=0.735 Sum_probs=18.0
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||++
T Consensus 53 Y~g~~FhRvi~~f~iQgGd~~ 73 (185)
T 2poe_A 53 YKNTIFHKNIKGFIIQGGDPT 73 (185)
T ss_dssp TTTEEEEEECTTSEEEEEETT
T ss_pred CCCCEEEEEECCCEEEcCCCC
Confidence 457889999999999999854
No 375
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=46.15 E-value=4.1 Score=34.16 Aligned_cols=21 Identities=62% Similarity=1.007 Sum_probs=18.4
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||+.
T Consensus 67 Y~g~~FhRvi~~f~iQgGd~~ 87 (184)
T 3rdd_A 67 YKGSCFHRIIPGFMCQGGDFT 87 (184)
T ss_dssp STTCBCCEEETTTEEEECCTT
T ss_pred cCCCEEEEccCCcEEEeCCCC
Confidence 567789999999999999865
No 376
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=45.70 E-value=59 Score=23.39 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 314 TAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 314 ~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
+.....-|--+++.++|.+|+..++++..
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALN 81 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHc
Confidence 33444444445555555555555555543
No 377
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=45.23 E-value=3.9 Score=33.92 Aligned_cols=21 Identities=67% Similarity=1.084 Sum_probs=17.2
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||++|.+++|+||+.
T Consensus 52 Y~g~~fhRvi~~f~iQgGd~~ 72 (172)
T 2c3b_A 52 YRESTFHRIIPNFMIQGGDFT 72 (172)
T ss_dssp STTCBCCEEETTTEEEECC--
T ss_pred cCCCEEEEEeCCCEEEeCCcC
Confidence 567889999999999999843
No 378
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.22 E-value=38 Score=36.08 Aligned_cols=76 Identities=14% Similarity=0.072 Sum_probs=47.1
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCC--cHHHHH-----hhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQ--SKTQQK-----HFRSYYTAALLNMAAVQLKFKAYKRAINLCDDI 340 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~a 340 (414)
+-+|..++..|++++|..+|++|-.-+....... ...... +........|...+..+.+.+-|+.++..++.|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5589999999999999999988763321111000 000000 011123446677777777777788888888888
Q ss_pred Hhc
Q psy793 341 LLM 343 (414)
Q Consensus 341 l~~ 343 (414)
|+.
T Consensus 924 I~~ 926 (950)
T 4gq2_M 924 DAS 926 (950)
T ss_dssp HHT
T ss_pred Hhh
Confidence 754
No 379
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=45.13 E-value=1.6e+02 Score=27.61 Aligned_cols=113 Identities=12% Similarity=0.072 Sum_probs=62.5
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHH-HH---------------HHHHHh
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLN-MA---------------AVQLKF 327 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~n-la---------------~~~~~l 327 (414)
...+-.+|..+...|+...|.-||--|=.+ ...+.+|.. +- .-...+
T Consensus 248 ~~Lc~~LG~RL~~~g~~~~A~lCYi~Ag~~-----------------dk~v~iW~~~~~~~~~~~~~~~~s~~~~~~~~L 310 (399)
T 2pm7_A 248 NEMMIKLGDRMKENGHRQDSLTLYLAAGSL-----------------DKVASIWLSEFPDLEDKLKKDNKTIYEAHSECM 310 (399)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHTCH-----------------HHHHHHHHHSHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhhhHHHHhhCCH-----------------HHHHHHHHHhcchhhhccccccCCcccccHHHH
Confidence 344557899999999999999999777432 111112211 00 000011
Q ss_pred hCHHHHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q psy793 328 KAYKRAINLCDDILLME-----PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 328 ~~~~~A~~~~~~al~~~-----p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 396 (414)
.++-+=...+..++... +.-...+...|..+...|.++.|+++++.. ..+++.+.....+++...+
T Consensus 311 qe~iEkv~vl~~a~~~~~~~~~~~l~~~~~eYA~lLA~qG~l~~A~~yL~~l---p~~~~~~~~lr~Rl~~a~~ 381 (399)
T 2pm7_A 311 TEFIERFTVFSNFINGSSTINNEQLIAKFLEFINLTTSTGNFELATEFLNSL---PSDNEEVKTEKARVLIASG 381 (399)
T ss_dssp HHHHHHHHHHHTTSCC---CCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHS---CTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCcCcHHHHHHHHHHHHHHHhCCCHHHHHHHHHhC---CCCChhHHHHHHHHHHhcC
Confidence 22222222344444321 112345667799999999999999988743 2244555555555555444
No 380
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.72 E-value=35 Score=34.68 Aligned_cols=50 Identities=18% Similarity=0.243 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNF 364 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~ 364 (414)
......|...+..|+|+-|.+.++.++..+|+|..|..-+|.+|.++|.-
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 44667888888999999999999999999999999999999999998743
No 381
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=44.54 E-value=1.6e+02 Score=27.83 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=42.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHHHHH
Q psy793 345 PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMRHHL 399 (414)
Q Consensus 345 p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~~~ 399 (414)
-.....|..+|-.+++.++|.+|+..|-.|-+. .-+|.++.+.+..+...+--.-
T Consensus 300 ~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanelip~~ 360 (489)
T 4gq4_A 300 DEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVIPNL 360 (489)
T ss_dssp TCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTHHHHH
T ss_pred cCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHhhhHH
Confidence 345677888899999999999999999998764 4568888888877766555443
No 382
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=44.42 E-value=41 Score=29.67 Aligned_cols=30 Identities=17% Similarity=0.184 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHH-hhCHHHHHHHHHHH
Q psy793 311 SYYTAALLNMAAVQLK-FKAYKRAINLCDDI 340 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~-l~~~~~A~~~~~~a 340 (414)
|....+.+|.+.-|.. +++.++|+..+++|
T Consensus 195 PirLGLaLNfSVFyYEIln~p~~Ac~LAk~A 225 (261)
T 3ubw_A 195 PIRLGLALNFSVFYYEILNSPDRACRLAKAA 225 (261)
T ss_dssp HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4444444454444333 44555555444444
No 383
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=44.29 E-value=1.3e+02 Score=28.96 Aligned_cols=48 Identities=10% Similarity=-0.083 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhcCCC-----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 330 YKRAINLCDDILLMEPN-----------------------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~-----------------------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
|+..+.+++.|+.+=|. -.-|+--+|.+|+.+++|++|++..++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 66677778877754331 1236677899999999999999999999864
No 384
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=44.27 E-value=3.8 Score=33.77 Aligned_cols=21 Identities=48% Similarity=0.792 Sum_probs=17.6
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.|++|+||++
T Consensus 40 Y~g~~FhRvi~~f~iQgGd~~ 60 (167)
T 3s6m_A 40 YDGTIFHRVINGFMIQGGGFE 60 (167)
T ss_dssp TTTEECCEEETTTEEEESSEE
T ss_pred cCCCEeEEecCCcEEEecccc
Confidence 456789999999999999643
No 385
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=44.13 E-value=80 Score=27.79 Aligned_cols=54 Identities=17% Similarity=0.121 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q psy793 280 MHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 341 (414)
Q Consensus 280 ~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al 341 (414)
-+.|...|++|+.+....- ...+|....+.+|.+.-|.. +++.++|+..+++|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~L--------~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTEL--------APTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC--------CCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 3578889999998854211 11257888888888887766 789999999888876
No 386
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=43.78 E-value=1e+02 Score=23.34 Aligned_cols=15 Identities=40% Similarity=0.747 Sum_probs=6.7
Q ss_pred CCHHHHHHHHHHHHh
Q psy793 362 NNFEQGLQDYEQALD 376 (414)
Q Consensus 362 g~~~~A~~~~~~al~ 376 (414)
++|++|+..|..|++
T Consensus 32 g~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 32 GNYEEALQLYQHAVQ 46 (117)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 444444444444443
No 387
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=42.80 E-value=45 Score=29.19 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q psy793 281 HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 341 (414)
Q Consensus 281 ~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al 341 (414)
+.|...|++|..+....- ...+|....+.+|.+.-|.. +++.++|+..+++|+
T Consensus 148 ~~a~~aY~~A~~iA~~~L--------~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHM--------QPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC--------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456666666666532111 11145555666666655444 566666666655554
No 388
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=42.41 E-value=83 Score=22.76 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy793 363 NFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLNLE 402 (414)
Q Consensus 363 ~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 402 (414)
+...++..-.++++.+|+|+.++..++.....-.-....+
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl~RNaQ 70 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQ 70 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555666678888877766666554444433333
No 389
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=42.17 E-value=4.9 Score=33.98 Aligned_cols=21 Identities=62% Similarity=1.024 Sum_probs=18.4
Q ss_pred ccccchhcchhhhHhhcCCCC
Q psy793 106 VISQYFHRIIPQFMIQGGDIT 126 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~ 126 (414)
|....|||+++.+++|+||+.
T Consensus 72 Y~g~~FhRvi~~f~iQgGd~~ 92 (193)
T 3k2c_A 72 YKGSTFHRIIPGFMVQGGDYT 92 (193)
T ss_dssp STTCBEEEEETTTEEEECCTT
T ss_pred ccCCEEEEEeCCCEEEeCCCC
Confidence 567789999999999999865
No 390
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=41.71 E-value=4.7 Score=34.32 Aligned_cols=18 Identities=56% Similarity=0.883 Sum_probs=16.0
Q ss_pred ccccchhcchhhhHhhcC
Q psy793 106 VISQYFHRIIPQFMIQGG 123 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g 123 (414)
|....|||+++.|++|+|
T Consensus 43 Ydg~~FhRvi~~f~iQgG 60 (201)
T 3bo7_A 43 FDDTIFHRCIRNFMIQGG 60 (201)
T ss_dssp TTTCBEEEEETTTEEEEC
T ss_pred cCCCEEEEeeCCCEEEcC
Confidence 446789999999999999
No 391
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=41.14 E-value=73 Score=20.78 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCCHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDILLMEPNNV-KALFRRGRAQVSMNNFEQGL 368 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~al~~~p~~~-~a~~~~g~~~~~lg~~~~A~ 368 (414)
..+..+|..-.-....++|....+- |...+... -+-.-+...++..|+|++|+
T Consensus 7 ~lLAe~AL~~TG~HcH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 7 KQLAELALAGTGHHCHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHccchHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 3444555566667778888665443 44445433 34556778899999999986
No 392
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=41.01 E-value=87 Score=29.64 Aligned_cols=64 Identities=14% Similarity=0.188 Sum_probs=46.2
Q ss_pred HHHHHHHHHhc-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHHH
Q psy793 333 AINLCDDILLM-----EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDL------LPNDQQILKEIAFVRKQMR 396 (414)
Q Consensus 333 A~~~~~~al~~-----~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~ 396 (414)
++..|.+|+.. +-.....|..+|-.+++.+++.+|+..+-.|-.. .-+|.++.+++-.|...+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneli 372 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVI 372 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhh
Confidence 34444444432 3346678888999999999999999999988764 3567888888777765443
No 393
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=39.83 E-value=60 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.349 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q psy793 310 RSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 341 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al 341 (414)
.|....+.+|.+.-|.. +++.++|+..+++|+
T Consensus 192 hPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AF 224 (268)
T 3efz_A 192 DPLYLATILNYTILKYDLLGNPEGAMKFANRAI 224 (268)
T ss_dssp CHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34445555555554442 455555555555544
No 394
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=39.82 E-value=1.7e+02 Score=24.62 Aligned_cols=68 Identities=4% Similarity=-0.120 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM--EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~--~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
++.++.+|...+.++ ......++...+...... .-..+.-|-..|..+...|++.+|...|+.+++..
T Consensus 76 D~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 76 DPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENN 145 (202)
T ss_dssp CHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 677788888777765 123366777777777654 45566677788999999999999999999999975
No 395
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=38.78 E-value=35 Score=37.18 Aligned_cols=53 Identities=8% Similarity=0.180 Sum_probs=40.6
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q psy793 319 NMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQAL 375 (414)
Q Consensus 319 nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al 375 (414)
.++..+++.+.++-|.+ .+...|.++..-|-+|.++...|++++|..+|++|-
T Consensus 817 ~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 34455666666655433 445667888888999999999999999999999874
No 396
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=37.62 E-value=2.9e+02 Score=26.70 Aligned_cols=48 Identities=15% Similarity=0.189 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhcCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 330 YKRAINLCDDILLMEPN-----------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~-----------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
|+..+++++.|+..=|. ..-|+--+|.+|+..++|++|++..++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777765332 1347778899999999999999999999863
No 397
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=36.05 E-value=41 Score=32.42 Aligned_cols=31 Identities=13% Similarity=-0.085 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
....++.-+|.+|+-+++|++|+.++++++.
T Consensus 189 tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 189 NTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3456788899999999999999999999984
No 398
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=35.88 E-value=3e+02 Score=26.80 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhcCCC-------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 330 YKRAINLCDDILLMEPN-------------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~-------------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
|+..+++++.|+..=|. ..-|+--+|.+|+..++|++|.+..++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 55566677777655441 1247778899999999999999999999863
No 399
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=35.81 E-value=1e+02 Score=22.39 Aligned_cols=26 Identities=4% Similarity=-0.093 Sum_probs=21.3
Q ss_pred HHhhhHHhhhcCHHHHHHHHHHHHHH
Q psy793 268 KNSGNEYFKLNRMHDAQRKYKKAVRY 293 (414)
Q Consensus 268 ~~~G~~~~~~~~~~~A~~~y~~Al~~ 293 (414)
...|..+|..|+|-+|.+.++.+..-
T Consensus 5 ~~~~~~lfn~g~~~eaHEvlE~~W~~ 30 (94)
T 2cwy_A 5 WEEVLGLWRAGRYYEVHEVLEPYWLK 30 (94)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHhh
Confidence 34677888889999999988888876
No 400
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=35.45 E-value=1.5e+02 Score=25.36 Aligned_cols=63 Identities=8% Similarity=0.010 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM--EPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~--~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
++.++.+|...+.+ . +.+...|...... .-..+.-|-..|..+...|+|.+|...|+.+++..
T Consensus 116 D~RyLklWl~Ya~~----~--~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 116 DVRYLRIWMQYVNY----I--DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHTT----C--SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHc----c--CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 56666666666653 2 3555666666544 44566677788999999999999999999999875
No 401
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=35.05 E-value=46 Score=31.95 Aligned_cols=32 Identities=22% Similarity=0.239 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.....++.-+|.+|+-+++|++|+.+++++|.
T Consensus 187 ~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 187 MNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 34456788899999999999999999999985
No 402
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=34.90 E-value=74 Score=27.57 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q psy793 281 HDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLK-FKAYKRAINLCDDIL 341 (414)
Q Consensus 281 ~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~A~~~~~~al 341 (414)
+.|...|++|..+....- ...+|....+.+|.+.-|.. +++.++|+..+++|+
T Consensus 150 e~a~~aY~~A~~iA~~~L--------~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEM--------PPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHS--------CTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhC--------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 455556666665532111 11135555555555554442 455555555555543
No 403
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=34.40 E-value=3e+02 Score=26.58 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=21.6
Q ss_pred CHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHcCCH
Q psy793 329 AYKRAINLCDDILLM-EPNNVKALFRRGRAQVSMNNF 364 (414)
Q Consensus 329 ~~~~A~~~~~~al~~-~p~~~~a~~~~g~~~~~lg~~ 364 (414)
.|++|+.+++++-.- ++...+-++..+.-|..-|+|
T Consensus 454 ~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~aGDy 490 (526)
T 2wb7_A 454 EYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMAGDY 490 (526)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhccHH
Confidence 367777777777633 344556666666655554444
No 404
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=34.37 E-value=3.2e+02 Score=30.18 Aligned_cols=91 Identities=12% Similarity=0.114 Sum_probs=58.2
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhC--------HHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q psy793 304 TQQKHFRSYYTAALLNMAAVQLKFKA--------YKRAINLCDDILLM-EPNNVKALFRRGRAQVSMNNFEQGLQDYEQA 374 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~nla~~~~~l~~--------~~~A~~~~~~al~~-~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~a 374 (414)
.+........+.+++..|.++.++.- ..+-.+.|.++++. ++.+.|++.....-.+.++.|-.|++.+.|+
T Consensus 1231 ~~m~~~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~ 1310 (1354)
T 3lxu_X 1231 TNMDKQKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKL 1310 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556667778877766665532 22233344555544 5667777655555555789999999999999
Q ss_pred HhhCCCCHHHHHHHHHHHHHH
Q psy793 375 LDLLPNDQQILKEIAFVRKQM 395 (414)
Q Consensus 375 l~l~P~~~~~~~~l~~~~~~~ 395 (414)
++-.| ..+....+..+...+
T Consensus 1311 ~~~k~-~~~~~~~~~~~~~~l 1330 (1354)
T 3lxu_X 1311 IEEKR-TRDHFVELAAINGAL 1330 (1354)
T ss_dssp HHHTC-CHHHHHHHHHHHHHH
T ss_pred Hhccc-cHHHHHHHHHHHHHc
Confidence 99887 455556665555444
No 405
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=34.22 E-value=1.4e+02 Score=22.15 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q psy793 318 LNMAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQDYE 372 (414)
Q Consensus 318 ~nla~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~ 372 (414)
..+|..-.-....++|....+- |...+...-+-.-+...++..|+|++|....+
T Consensus 11 AE~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~ 64 (116)
T 2p58_C 11 AEIALIGTGNHYHEEANCIAEW-LHLKGEEEAVQLIRLSSLMNRGDYASALQQGN 64 (116)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcC
Confidence 3444444445555665444332 33333332333445556667777777765544
No 406
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=34.17 E-value=1.8e+02 Score=23.22 Aligned_cols=63 Identities=3% Similarity=-0.016 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 310 RSYYTAALLNMAAVQLKFKAYKRAINLCDDILLME--PNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 310 ~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~--p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
++.++.+|...+... +++...+....... -..+.-|-..|..+...|++.+|...|+.+++..
T Consensus 67 D~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 67 DPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp CHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 567777777666542 33666677666543 4556667788999999999999999999999975
No 407
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=34.13 E-value=49 Score=31.81 Aligned_cols=32 Identities=19% Similarity=0.219 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
.....++.-+|.+|+-+++|++|+..++++|.
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 34456788889999999999999999999985
No 408
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=34.12 E-value=2.7e+02 Score=25.38 Aligned_cols=127 Identities=9% Similarity=-0.071 Sum_probs=82.4
Q ss_pred HHHhhhHHhhhcCH---HHHHHHHHHHHHHH-HhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 267 IKNSGNEYFKLNRM---HDAQRKYKKAVRYI-KWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 267 ~~~~G~~~~~~~~~---~~A~~~y~~Al~~~-~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
...+-......|+| .+|...|+...... .... -...+.+++.=|..+++.+++..|.+.+...++
T Consensus 15 ~i~rl~~~I~~G~y~~~YEAHQ~~RTi~~Ry~~~k~-----------y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llve 83 (336)
T 3lpz_A 15 IIARLQRRIAEGQPEEQYEAAQETRLVAARYSKQGN-----------WAAAVDILASVSQTLLRSGQGGSGGDLAVLLVD 83 (336)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC-----------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccHHHHHHHHHHHHHHhhcC-----------HHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHH
Confidence 33444556778899 89999987766442 1111 345667888899999999999999888765553
Q ss_pred c-----CCCCHHHHHHHHHHHHHcCCHH-HHHHHHHHHHhh-------CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q psy793 343 M-----EPNNVKALFRRGRAQVSMNNFE-QGLQDYEQALDL-------LPNDQQILKEIAFVRKQMRHHLNLEKM 404 (414)
Q Consensus 343 ~-----~p~~~~a~~~~g~~~~~lg~~~-~A~~~~~~al~l-------~P~~~~~~~~l~~~~~~~~~~~~~~k~ 404 (414)
. -+-+....-++..++.....-+ .=.+..++|++. .-.+++.+..++.++-+.++..+.++.
T Consensus 84 vy~~~~~~~~~~~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H 158 (336)
T 3lpz_A 84 TFRQAGQRVDGASRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKH 158 (336)
T ss_dssp HHHHHTCCCCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHH
Confidence 3 1234456667777776665421 112233344432 236789999999998877777666654
No 409
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=34.11 E-value=1.3e+02 Score=21.65 Aligned_cols=18 Identities=22% Similarity=0.481 Sum_probs=8.0
Q ss_pred HHcCCHHHHHHHHHHHHh
Q psy793 359 VSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 359 ~~lg~~~~A~~~~~~al~ 376 (414)
-..++|++|+..|..+++
T Consensus 26 D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 334444444444444443
No 410
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=40.13 E-value=8.6 Score=39.23 Aligned_cols=52 Identities=13% Similarity=0.107 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q psy793 349 KALFRRGRAQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 349 ~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 400 (414)
.+...+|...+..|+|..|...+..++..+|+|.+++..++.++.+++.+.+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 4556667777777888888888888888888888888888887777776654
No 411
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=33.51 E-value=1.3e+02 Score=21.35 Aligned_cols=29 Identities=21% Similarity=0.135 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q psy793 364 FEQGLQDYEQALDLLPNDQQILKEIAFVR 392 (414)
Q Consensus 364 ~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 392 (414)
..+++..-.++|+.+|+|+.++..++...
T Consensus 26 ~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl 54 (85)
T 2ca5_A 26 LQGELTLALDKLAKNPSNPQLLAEYQSKL 54 (85)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 34444555555566777766555554443
No 412
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=32.66 E-value=99 Score=19.85 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHH
Q psy793 259 QMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIK 295 (414)
Q Consensus 259 ~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~ 295 (414)
+....|..+..-+...+.-.++..|++..++||+++.
T Consensus 15 ~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 15 SKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 3445677777888888888999999999999998853
No 413
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=31.86 E-value=96 Score=29.61 Aligned_cols=47 Identities=11% Similarity=0.113 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 330 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~--------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
|+..+.+++.|+.+=|. -.-|+.-+|.+|+.+++|++|++..++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45566666776655332 234777889999999999999999999885
No 414
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=31.79 E-value=1.3e+02 Score=21.03 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=11.1
Q ss_pred HHHHHcCCHHHHHHHHHHHHh
Q psy793 356 RAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 356 ~~~~~lg~~~~A~~~~~~al~ 376 (414)
.-.-..|+|++|+..|..+++
T Consensus 21 v~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 21 IDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 333444566555555555554
No 415
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=31.46 E-value=49 Score=32.15 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
.....++.-+|.+|+-+++|++|+.+++++|..
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 344567888999999999999999999999853
No 416
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.84 E-value=3.9e+02 Score=25.84 Aligned_cols=48 Identities=10% Similarity=-0.034 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHhcCCC---------------CHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhh
Q psy793 330 YKRAINLCDDILLMEPN---------------NVKALFRRGRAQVSM--------NNFEQGLQDYEQALDL 377 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~---------------~~~a~~~~g~~~~~l--------g~~~~A~~~~~~al~l 377 (414)
|+..+++++.|+..=|. -.-|+--+|.+|+.. ++|++|+...++++..
T Consensus 163 ~~~I~~DL~~A~~~Lp~~~~~~~~g~~~~r~tk~aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~vi~~ 233 (535)
T 3ihv_A 163 YEYIEDDLLYACDILPYATDDQYRESNDYRFSKGAALGLLTKVYATWAGYPVKDESKWEAAAKTARILVES 233 (535)
T ss_dssp HHHHHHHHHHHHHHCCCTTTCCSSSCCTTSCCHHHHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCcccccccccccccCccHHHHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHHHhc
Confidence 55566677777654321 123556677777765 5799999999999863
No 417
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=29.59 E-value=1.4e+02 Score=28.73 Aligned_cols=47 Identities=4% Similarity=-0.123 Sum_probs=35.2
Q ss_pred HH-HHHHHHHHHHhc-CCC--------CHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHh
Q psy793 330 YK-RAINLCDDILLM-EPN--------NVKALFRRGRAQVSMN---------NFEQGLQDYEQALD 376 (414)
Q Consensus 330 ~~-~A~~~~~~al~~-~p~--------~~~a~~~~g~~~~~lg---------~~~~A~~~~~~al~ 376 (414)
|+ ..+.+++.|+.. -|. -.-|+--+|.+|+.++ +|++|++..++++.
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHc
Confidence 56 677788888775 331 2346777888888877 89999999999886
No 418
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=29.38 E-value=11 Score=36.18 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHh
Q psy793 260 MEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKW 296 (414)
Q Consensus 260 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~ 296 (414)
..+.|..+..+|..+-+.|+|++|+.+|..|++++-.
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~ 43 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLH 43 (444)
T ss_dssp -------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4456777888899999999999999999999998654
No 419
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=29.33 E-value=1.2e+02 Score=29.21 Aligned_cols=48 Identities=10% Similarity=0.119 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 330 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~--------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
|+..+.+++.|+.+=|. -.-|+--+|.+|+.+++|++|++..++++..
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 56677777777765442 2347778899999999999999999999874
No 420
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=29.04 E-value=45 Score=24.09 Aligned_cols=66 Identities=12% Similarity=0.248 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHhcCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHHHHHHH
Q psy793 329 AYKRAINLCDDILLMEPNN-------VKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN-DQQILKEIAFVRKQMRHHLN 400 (414)
Q Consensus 329 ~~~~A~~~~~~al~~~p~~-------~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~-~~~~~~~l~~~~~~~~~~~~ 400 (414)
.|++|..+..++|..|..+ +.-||+ +++..+.+++.+.-. .-..+.....++.++.....
T Consensus 12 ~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~Yk------------kGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~ 79 (89)
T 3eab_A 12 FHKQAFEYISIALRIDEDEKAGQKEQAVEWYK------------KGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLV 79 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHH------------HHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcccCCCHHHHHHHHH------------HHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHH
Confidence 4778888888888775431 223343 445556667775432 33445555666666666655
Q ss_pred HHHHHH
Q psy793 401 LEKMTY 406 (414)
Q Consensus 401 ~~k~~~ 406 (414)
.-+.++
T Consensus 80 ~v~~RL 85 (89)
T 3eab_A 80 MAKDRL 85 (89)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 421
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=29.03 E-value=1.1e+02 Score=29.39 Aligned_cols=47 Identities=15% Similarity=0.149 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q psy793 330 YKRAINLCDDILLMEPN--------NVKALFRRGRAQVSMNNFEQGLQDYEQALD 376 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~--------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~ 376 (414)
|+..+.+++.|+.+=|. -.-|+.-+|.+|+.+++|++|++..++++.
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45556666666554332 234777889999999999999999999886
No 422
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=28.51 E-value=1.1e+02 Score=29.54 Aligned_cols=49 Identities=22% Similarity=0.203 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHhcCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q psy793 330 YKRAINLCDDILLMEPN-----------NVKALFRRGRAQVSMNNFEQGLQDYEQALDLL 378 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~-----------~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~ 378 (414)
|+..+++++.|+..=|. ..-|+--+|.+|+.+++|++|+...++++...
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 45555666666544332 23477788999999999999999999998753
No 423
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=28.13 E-value=59 Score=31.76 Aligned_cols=32 Identities=25% Similarity=0.302 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
....++.-+|.+|+-+++|++|+..++++|..
T Consensus 180 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 180 TKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44567788899999999999999999999964
No 424
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=27.98 E-value=2.4e+02 Score=22.73 Aligned_cols=72 Identities=13% Similarity=0.096 Sum_probs=48.2
Q ss_pred HHHHHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHH-HHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 264 IRTIKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAAL-LNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 264 a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
...-...|..+|..|+|-+|.+.++.+..-.+... ++ . .-...-+. .-.|..+.+.+++.-|...+.+++.
T Consensus 32 ~~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~-----~e-r--~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 32 LRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN-----TE-S--KFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS-----HH-H--HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCchHHHHHHHHHHHhcCCCc-----hH-H--HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 33457788999999999999999988886521100 00 0 11222233 4455566778999999999999986
Q ss_pred c
Q psy793 343 M 343 (414)
Q Consensus 343 ~ 343 (414)
.
T Consensus 104 ~ 104 (161)
T 2ijq_A 104 Y 104 (161)
T ss_dssp H
T ss_pred H
Confidence 3
No 425
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=26.87 E-value=52 Score=31.74 Aligned_cols=32 Identities=25% Similarity=0.352 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
....++.-+|.+|+-+++|++|+.+++++|..
T Consensus 200 tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 200 NYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 44567788899999999999999999999863
No 426
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=25.76 E-value=1.4e+02 Score=23.67 Aligned_cols=39 Identities=15% Similarity=-0.032 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHHH
Q psy793 256 QLNQMEDVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRYI 294 (414)
Q Consensus 256 ~~~~~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~~ 294 (414)
++....+.|..+...|..|...|+.+.|...|.+-+.++
T Consensus 34 pl~~y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~ 72 (144)
T 2a9u_A 34 STKSYVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVY 72 (144)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 466678899999999999999999999999999998885
No 427
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=25.48 E-value=2.5e+02 Score=26.89 Aligned_cols=75 Identities=8% Similarity=-0.026 Sum_probs=52.1
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc-CC
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDILLM-EP 345 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~-~p 345 (414)
....-..||+.++...|...+ ++++.... ....+. --....+..++-+|..++-.++|.+|.+++..|+.. .|
T Consensus 179 ~n~L~kiYFkl~~~~lckni~-k~i~~~~~---~p~~~~--~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp 252 (455)
T 3t5v_B 179 VNKLNNIYFRIESPQLCSNIF-KNFQPKSM---LAHFNE--YQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLN 252 (455)
T ss_dssp HHHHHHHHHHSSCCTTHHHHH-HTHHHHCC---CSCGGG--SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHH-HHhccCCC---CcChhh--CCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCC
Confidence 334457899999988887776 34433111 000110 114567788999999999999999999999999998 66
Q ss_pred CC
Q psy793 346 NN 347 (414)
Q Consensus 346 ~~ 347 (414)
..
T Consensus 253 ~~ 254 (455)
T 3t5v_B 253 LP 254 (455)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 428
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=25.46 E-value=2.6e+02 Score=28.22 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=16.6
Q ss_pred HHHhhhHHhhhcCHHHHHHHHHHH
Q psy793 267 IKNSGNEYFKLNRMHDAQRKYKKA 290 (414)
Q Consensus 267 ~~~~G~~~~~~~~~~~A~~~y~~A 290 (414)
....|..+-.+|++++|+..|.-|
T Consensus 446 ~~~aA~~ae~~G~~~dAi~LY~La 469 (661)
T 2qx5_A 446 TEQAARRADEDGRIYDSILLYQLA 469 (661)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHh
Confidence 345666777788888888876444
No 429
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=25.38 E-value=1.4e+02 Score=22.19 Aligned_cols=50 Identities=12% Similarity=0.042 Sum_probs=20.9
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q psy793 320 MAAVQLKFKAYKRAINLCDDILLMEPNNVKALFRRGRAQVSMNNFEQGLQD 370 (414)
Q Consensus 320 la~~~~~l~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~lg~~~~A~~~ 370 (414)
+|..-.-....++|....+= |...+...-+-.-+...++..|+|++|...
T Consensus 12 ~AL~gTG~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l 61 (115)
T 2uwj_G 12 LALAGSGQHCHEEALCIAEW-LERLGQDEAARLIRISSLANQGRYQEALAF 61 (115)
T ss_dssp HHHHHHTTTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHGG
T ss_pred HHHHHccchHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHh
Confidence 33333334444554433222 222233222333344455555665555543
No 430
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=24.55 E-value=12 Score=34.88 Aligned_cols=21 Identities=24% Similarity=0.279 Sum_probs=18.7
Q ss_pred ccccchhcchhhhHhhcCCCCc
Q psy793 106 VISQYFHRIIPQFMIQGGDITN 127 (414)
Q Consensus 106 ~~~~~f~~~~~~~~~~~g~~~~ 127 (414)
|....|||+ +.|++|+||+++
T Consensus 215 YdGt~FHRV-~gFmIQgGDp~g 235 (369)
T 3rfy_A 215 YDGMEIQRS-DGFVVQTGDPEG 235 (369)
T ss_dssp TTTEECEEE-EEEEECCCCCCC
T ss_pred cCCCeeeee-CCeeEecCCCCC
Confidence 457899999 999999999985
No 431
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=24.25 E-value=81 Score=30.91 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 312 YYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 312 ~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
....++.-+|.+|+-.++|++|...++++|..
T Consensus 196 tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 196 CKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 44567788899999999999999999999863
No 432
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=23.98 E-value=4.9e+02 Score=24.99 Aligned_cols=47 Identities=9% Similarity=0.090 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCCC---------HHHHHHHHHHHH------HcCCHHHHHHHHHHHHh
Q psy793 330 YKRAINLCDDILLMEPNN---------VKALFRRGRAQV------SMNNFEQGLQDYEQALD 376 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~~---------~~a~~~~g~~~~------~lg~~~~A~~~~~~al~ 376 (414)
|+..+.+++.|+..=|.. .-|+--+|.+|+ ..++|++|++..++++.
T Consensus 161 y~~I~~DL~~A~~~Lp~~~~~~gr~tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 161 FNWIEAELNEIKPNLPSPRSEYGVADQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHGGGSCCTTSSTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCcCHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 667778888887654421 235556677666 67899999999999985
No 433
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.46 E-value=78 Score=30.51 Aligned_cols=33 Identities=15% Similarity=-0.070 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhc
Q psy793 311 SYYTAALLNMAAVQLKFKAYKRAINLCDDILLM 343 (414)
Q Consensus 311 ~~~~~~~~nla~~~~~l~~~~~A~~~~~~al~~ 343 (414)
.....++.-+|.+|+-+++|++|+.+++++|..
T Consensus 194 ~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 194 FNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 344567788899999999999999999999854
No 434
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=22.70 E-value=1.2e+02 Score=24.13 Aligned_cols=32 Identities=13% Similarity=0.040 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHhcC
Q psy793 313 YTAALLNMAAVQLKFKAYKRAINLCDDILLME 344 (414)
Q Consensus 313 ~~~~~~nla~~~~~l~~~~~A~~~~~~al~~~ 344 (414)
.+.++..+|.+|-++|+-++|-+...+|.+-.
T Consensus 124 ~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 124 SASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 36788999999999999999999999887653
No 435
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=22.20 E-value=1e+02 Score=26.26 Aligned_cols=65 Identities=12% Similarity=0.123 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhcCCCCHH-------HHHHHHH-HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q psy793 330 YKRAINLCDDILLMEPNNVK-------ALFRRGR-AQVSMNNFEQGLQDYEQALDLLPNDQQILKEIAFVRKQ 394 (414)
Q Consensus 330 ~~~A~~~~~~al~~~p~~~~-------a~~~~g~-~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 394 (414)
.+.|+...+..-+-.+-..+ ..--.|. +++..|.|++|.+.+++.+.-+|.+...+..|..+-.+
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 55666666655544432111 1111233 46778999999999999998887777777777666443
No 436
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=22.10 E-value=1.8e+02 Score=22.34 Aligned_cols=79 Identities=8% Similarity=0.001 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHH
Q psy793 315 AALLNMAAVQLKFKAYKRAINLCDDI---LLMEPNNVKALFRRGRAQVSMNNFEQGLQDYEQALDLLPN--DQQILKEIA 389 (414)
Q Consensus 315 ~~~~nla~~~~~l~~~~~A~~~~~~a---l~~~p~~~~a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~--~~~~~~~l~ 389 (414)
.++-..+.+|+..++.+..+..+... ++..|... .-.+-...--.+..+|...+++..+..-. -..++..+.
T Consensus 41 e~LeeASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~---~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~ 117 (126)
T 2npu_A 41 EGLEEASRLYFGERNVKGMFEVLEPLHAMMERGPQTL---KETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYY 117 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHHHHHccCCCCH---HHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHH
Confidence 34445556777888888888888777 33345433 22233333335667788888887654322 135677777
Q ss_pred HHHHHHH
Q psy793 390 FVRKQMR 396 (414)
Q Consensus 390 ~~~~~~~ 396 (414)
.+.+++.
T Consensus 118 ~Vf~rI~ 124 (126)
T 2npu_A 118 HVFRRIS 124 (126)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 437
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.08 E-value=64 Score=31.19 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHhhCHHHHHHHHHHHHh
Q psy793 313 YTAALLNMAAVQLKFKAYKRAINLCDDILL 342 (414)
Q Consensus 313 ~~~~~~nla~~~~~l~~~~~A~~~~~~al~ 342 (414)
...++.-+|.+|+.+++|++|+..+++++.
T Consensus 179 k~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 179 QGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 345777889999999999999999999984
No 438
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=21.40 E-value=86 Score=24.33 Aligned_cols=32 Identities=19% Similarity=0.226 Sum_probs=26.7
Q ss_pred HHHHHHHHhhhHHhhhcCHHHHHHHHHHHHHH
Q psy793 262 DVIRTIKNSGNEYFKLNRMHDAQRKYKKAVRY 293 (414)
Q Consensus 262 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~Al~~ 293 (414)
+.+..+...|..++.+||.-+|-+.|=+|.+-
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAaee 36 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAEE 36 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 35778899999999999999998888777764
No 439
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=21.21 E-value=99 Score=28.70 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhhccCCcHHHHHhhHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q psy793 283 AQRKYKKAVRYIKWYNQSQSKTQQKHFRSYYTAALLNMAAVQLKFKAYKRAINLCDDIL 341 (414)
Q Consensus 283 A~~~y~~Al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A~~~~~~al 341 (414)
++..|.+||.....+= ....+--|.-+|-++.+.+++.+|+.....|-
T Consensus 276 ~l~L~~~AI~sa~~yY-----------~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREY-----------SDHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHS-----------TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-----------ccCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 6777888887643222 12223457778999999999999999877664
No 440
>2l0c_A Putative membrane protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Salmonella enterica subsp}
Probab=20.28 E-value=69 Score=23.51 Aligned_cols=49 Identities=24% Similarity=0.429 Sum_probs=35.7
Q ss_pred CCCcEEEEEEeeCCeeeee-EEEEEcCCcchhhHHHHHHhhhcCCCCCCCCcccccCCCcceEEecc
Q psy793 8 EGNYIVFLDVSIGEEKVGR-MVIELFKHIVPKTAENFRALCTGEYGKGKLGKALHFTGSRFHRIIPQ 73 (414)
Q Consensus 8 ~~~~~~~~~~~~~~~~~G~-i~ieL~~~~aP~~~~nF~~l~~~~~~~~~~~~~~~y~~~~f~rv~~~ 73 (414)
..+-.|+|.+.-+ |+ +.+.|- ...|-.|+.|+. -.+.|.||.|....++
T Consensus 35 ~~~Y~vtFe~~~G----~~~~ef~V~-------~~~Y~~L~eGD~------G~Lt~QGTRfl~Fer~ 84 (97)
T 2l0c_A 35 SMRYEASFKPLNG----GLEKTFRLQ-------AQQYHALTVGDQ------GTLSYKGTRFVGFVSR 84 (97)
T ss_dssp CSCCEEEEEETTS----CCCEEEECC-------HHHHTTSCTTCC------EEEEEETTEEEEEECS
T ss_pred ceEEEEEEEECCC----CccEEEEEC-------HHHCCCCCCCCE------EEEEEeeeeEEeeecC
Confidence 4456788888775 56 766653 347888998887 3677999999877664
No 441
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.02 E-value=1.4e+02 Score=28.52 Aligned_cols=30 Identities=13% Similarity=-0.086 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q psy793 348 VKALFRRGRAQVSMNNFEQGLQDYEQALDL 377 (414)
Q Consensus 348 ~~a~~~~g~~~~~lg~~~~A~~~~~~al~l 377 (414)
.-|+--+|.+|+.+++|++|++..++++..
T Consensus 191 ~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 191 DVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 347778899999999999999999999864
Done!