BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7930
         (146 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|3IWP|A Chain A, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|B Chain B, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|C Chain C, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|D Chain D, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|E Chain E, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|F Chain F, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|G Chain G, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|H Chain H, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|I Chain I, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|J Chain J, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|K Chain K, Crystal Structure Of Human Copper Homeostasis Protein Cutc
 pdb|3IWP|L Chain L, Crystal Structure Of Human Copper Homeostasis Protein Cutc
          Length = 287

 Score =  137 bits (345), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 1/132 (0%)

Query: 8   NKTTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIR 67
           N   +EVCVDSV SA+ A RGGADR+ELC+ LSEGG TP++G+ +V+K+ V +PVFVMIR
Sbjct: 38  NGFLMEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIR 97

Query: 68  VRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPI 127
            R G DF++S  E E+M  D       GADG V GALT +  ID E    L  I    P+
Sbjct: 98  PRGG-DFLYSDREIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPV 156

Query: 128 TFHRAFDVVREP 139
           TFHRAFD+V +P
Sbjct: 157 TFHRAFDMVHDP 168


>pdb|1X7I|A Chain A, Crystal Structure Of The Native Copper Homeostasis Protein
           (Cutcm) With Calcium Binding From Shigella Flexneri 2a
           Str. 301
 pdb|1X7I|B Chain B, Crystal Structure Of The Native Copper Homeostasis Protein
           (Cutcm) With Calcium Binding From Shigella Flexneri 2a
           Str. 301
          Length = 256

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 74/128 (57%), Gaps = 1/128 (0%)

Query: 12  LEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAG 71
           LE+C  S+  AL A + GADR+ELCAA  EGGLTP+LG+ + +++ V +PV  +IR R G
Sbjct: 4   LEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGG 63

Query: 72  FDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131
            DF +S  E   +  D     E G  G V G L  +  +D+  + ++    G   +TFHR
Sbjct: 64  -DFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHR 122

Query: 132 AFDVVREP 139
           AFD+   P
Sbjct: 123 AFDMCANP 130


>pdb|1TWD|A Chain A, Crystal Structure Of The Putative Copper Homeostasis
           Protein (Cutc) From Shigella Flexneri, Northeast
           Structural Genomics Target Sfr33
 pdb|1TWD|B Chain B, Crystal Structure Of The Putative Copper Homeostasis
           Protein (Cutc) From Shigella Flexneri, Northeast
           Structural Genomics Target Sfr33
          Length = 256

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 12  LEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAG 71
           LE+C  S   AL A + GADR+ELCAA  EGGLTP+LG+ + +++ V +PV  +IR R G
Sbjct: 4   LEICCYSXECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGG 63

Query: 72  FDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131
            DF +S  E   +  D     E G  G V G L  +  +D     ++    G   +TFHR
Sbjct: 64  -DFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDXPRXEKIXAAAGPLAVTFHR 122

Query: 132 AFDVVREP 139
           AFD    P
Sbjct: 123 AFDXCANP 130


>pdb|1X8C|A Chain A, Crystal Structure Of The Semet-derivative Copper
           Homeostasis Protein (cutcm) With Calcium Binding From
           Shigella Flexneri 2a Str. 301
 pdb|1X8C|B Chain B, Crystal Structure Of The Semet-derivative Copper
           Homeostasis Protein (cutcm) With Calcium Binding From
           Shigella Flexneri 2a Str. 301
          Length = 256

 Score = 95.1 bits (235), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 1/128 (0%)

Query: 12  LEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAG 71
           LE+C  S   AL A + GADR+ELCAA  EGGLTP+LG+ + +++ V +PV  +IR R G
Sbjct: 4   LEICCYSXECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGG 63

Query: 72  FDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131
            DF +S  E   +  D     E G  G V G L  +  +D     ++    G   +TFHR
Sbjct: 64  -DFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVDXPRXEKIXAAAGPLAVTFHR 122

Query: 132 AFDVVREP 139
           AFD    P
Sbjct: 123 AFDXCANP 130


>pdb|2BDQ|A Chain A, Crystal Structure Of The Putative Copper Homeostasis
           Protein Cutc From Streptococcus Agalactiae, Northeast
           Strucural Genomics Target Sar15.
 pdb|2BDQ|B Chain B, Crystal Structure Of The Putative Copper Homeostasis
           Protein Cutc From Streptococcus Agalactiae, Northeast
           Strucural Genomics Target Sar15
          Length = 224

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 4/134 (2%)

Query: 13  EVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL---VPVFVMIRVR 69
           E C +++       +    R+ELC  L+ GG TP+ G+ +   + +    + V V IR R
Sbjct: 5   EFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVXIRPR 64

Query: 70  AGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129
            G +FV++  E  I   D  + VE  +D  V+G LT    ID E I QL       P+ F
Sbjct: 65  GG-NFVYNDLELRIXEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVF 123

Query: 130 HRAFDVVREPNEKR 143
           H AFDV+ + ++K+
Sbjct: 124 HXAFDVIPKSDQKK 137


>pdb|3L21|A Chain A, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
 pdb|3L21|B Chain B, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
 pdb|3L21|C Chain C, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
 pdb|3L21|D Chain D, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
 pdb|3L21|E Chain E, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
 pdb|3L21|F Chain F, The Crystal Structure Of A Dimeric Mutant Of
           Dihydrodipicolinate Synthase (Dapa, Rv2753c) From
           Mycobacterium Tuberculosis - Dhdps- A204r
          Length = 304

 Score = 28.9 bits (63), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 88  CHQFVESGADGFVIGALTGEQEI-----DIEFIRQLKTIIGDR 125
            +  V+ G DG V+   TGE         IE +R +   +GDR
Sbjct: 42  ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDR 84


>pdb|1XXX|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|C Chain C, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|D Chain D, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|E Chain E, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|F Chain F, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|G Chain G, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
 pdb|1XXX|H Chain H, Crystal Structure Of Dihydrodipicolinate Synthase (Dapa,
           Rv2753c) From Mycobacterium Tuberculosis
          Length = 303

 Score = 28.9 bits (63), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 5/43 (11%)

Query: 88  CHQFVESGADGFVIGALTGEQEI-----DIEFIRQLKTIIGDR 125
            +  V+ G DG V+   TGE         IE +R +   +GDR
Sbjct: 41  ANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDR 83


>pdb|1K8K|E Chain E, Crystal Structure Of Arp23 COMPLEX
 pdb|1TYQ|E Chain E, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
           Calcium
 pdb|1U2V|E Chain E, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
           Calcium
 pdb|2P9I|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
           With Adp And Crosslinked With Gluteraldehyde
 pdb|2P9K|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
           With Atp And Crosslinked With Glutaraldehyde
 pdb|2P9L|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX
 pdb|2P9N|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
           With Adp
 pdb|2P9P|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
           With Adp
 pdb|2P9S|E Chain E, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
           AtpMG2+
 pdb|2P9U|E Chain E, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
           With Amp-Pnp And Calcium
 pdb|3DXK|E Chain E, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
           Ck0944636
 pdb|3DXM|E Chain E, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
           Ck0993548
 pdb|3RSE|E Chain E, Structural And Biochemical Characterization Of Two Binding
           Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
           COMPLEX
 pdb|3UKR|E Chain E, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
           Inhibitor Ck-666
 pdb|3UKU|E Chain E, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
 pdb|3ULE|E Chain E, Structure Of Bos Taurus Arp2/3 Complex With Bound
           Inhibitor Ck-869 And Atp
          Length = 178

 Score = 28.1 bits (61), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 77  SQAEKEIMALDCHQFVESGADGFVIGALTG------EQEIDIEFIRQLKTIIGDRPITFH 130
           SQ EKE+  L    F   G  GF + A+        E E+   +++QL+   G R     
Sbjct: 89  SQGEKEMYTLGITNFPIPGEPGFPLNAIYAKPANKQEDEVMRAYLQQLRQETGLR--LCE 146

Query: 131 RAFDVVREPNEKRW 144
           + FD   +   K W
Sbjct: 147 KVFDPQNDKPSKWW 160


>pdb|1POI|B Chain B, Crystal Structure Of Glutaconate Coenzyme A-transferase
          From Acidaminococcus Fermentans To 2.55 Angstoms
          Resolution
 pdb|1POI|D Chain D, Crystal Structure Of Glutaconate Coenzyme A-transferase
          From Acidaminococcus Fermentans To 2.55 Angstoms
          Resolution
          Length = 260

 Score = 26.9 bits (58), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 65 MIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95
          ++ V  G   + +   K + A DCH  VESG
Sbjct: 24 VVTVGTGLPLIGASVAKRVYAPDCHIIVESG 54


>pdb|1OMO|A Chain A, Alanine Dehydrogenase Dimer WBOUND NAD (ARCHAEAL)
 pdb|1OMO|B Chain B, Alanine Dehydrogenase Dimer WBOUND NAD (ARCHAEAL)
          Length = 322

 Score = 26.6 bits (57), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 90  QFVESGADGFVIGA-LTGEQEIDIEFIRQLKTIIGD 124
           ++VE G     IGA   G+QE+D+E +++ K ++ D
Sbjct: 205 EWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDD 240


>pdb|1VLL|A Chain A, Crystal Structure Of Alanine Dehydrogenase (Af1665) From
           Archaeoglobus Fulgidus At 2.80 A Resolution
 pdb|1VLL|B Chain B, Crystal Structure Of Alanine Dehydrogenase (Af1665) From
           Archaeoglobus Fulgidus At 2.80 A Resolution
          Length = 334

 Score = 26.6 bits (57), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)

Query: 90  QFVESGADGFVIGA-LTGEQEIDIEFIRQLKTIIGD 124
           ++VE G     IGA   G+QE+D+E +++ K ++ D
Sbjct: 217 EWVEEGTHINAIGADGPGKQELDVEILKKAKIVVDD 252


>pdb|3Q45|A Chain A, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|B Chain B, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|C Chain C, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|D Chain D, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|E Chain E, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|F Chain F, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|G Chain G, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|H Chain H, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q45|I Chain I, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Val
 pdb|3Q4D|A Chain A, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|B Chain B, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|C Chain C, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|D Chain D, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|E Chain E, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|F Chain F, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|G Chain G, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|H Chain H, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
 pdb|3Q4D|I Chain I, Crystal Structure Of Dipeptide Epimerase From Cytophaga
           Hutchinsonii Complexed With Mg And Dipeptide D-Ala-L-Ala
          Length = 368

 Score = 26.6 bits (57), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 73  DFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGD 124
           D+  S  E   MA D  Q  ++G +  +   + G +E+D+E IR ++   GD
Sbjct: 133 DYTVSIDEPHKMAADAVQIKKNGFE-IIKVKVGGSKELDVERIRMIREAAGD 183


>pdb|1K89|A Chain A, K89l Mutant Of Glutamate Dehydrogenase
          Length = 449

 Score = 25.8 bits (55), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%)

Query: 70  AGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129
           AGF  V   A K++  L       SG DG++        E  I ++ +++    ++   +
Sbjct: 236 AGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY 295

Query: 130 HRAFDVVREPNEKRW 144
              F V   P EK W
Sbjct: 296 ADKFGVQFFPGEKPW 310


>pdb|1HRD|A Chain A, Glutamate Dehydrogenase
 pdb|1HRD|B Chain B, Glutamate Dehydrogenase
 pdb|1HRD|C Chain C, Glutamate Dehydrogenase
 pdb|1BGV|A Chain A, Glutamate Dehydrogenase
          Length = 449

 Score = 25.8 bits (55), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%)

Query: 70  AGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129
           AGF  V   A K++  L       SG DG++        E  I ++ +++    ++   +
Sbjct: 236 AGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY 295

Query: 130 HRAFDVVREPNEKRW 144
              F V   P EK W
Sbjct: 296 ADKFGVQFFPGEKPW 310


>pdb|1AUP|A Chain A, Glutamate Dehydrogenase
          Length = 449

 Score = 25.8 bits (55), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 31/75 (41%)

Query: 70  AGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129
           AGF  V   A K++  L       SG DG++        E  I ++ +++    ++   +
Sbjct: 236 AGFGNVAWGAAKKLAELGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY 295

Query: 130 HRAFDVVREPNEKRW 144
              F V   P EK W
Sbjct: 296 ADKFGVQFFPGEKPW 310


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.326    0.141    0.418 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,084,840
Number of Sequences: 62578
Number of extensions: 147806
Number of successful extensions: 433
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 417
Number of HSP's gapped (non-prelim): 18
length of query: 146
length of database: 14,973,337
effective HSP length: 90
effective length of query: 56
effective length of database: 9,341,317
effective search space: 523113752
effective search space used: 523113752
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 46 (22.3 bits)