Query psy7930
Match_columns 146
No_of_seqs 151 out of 687
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 22:30:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7930.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7930hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bdq_A Copper homeostasis prot 100.0 8.7E-62 3E-66 395.8 12.0 132 10-142 2-138 (224)
2 1twd_A Copper homeostasis prot 100.0 4E-61 1.4E-65 398.3 15.8 132 10-142 2-133 (256)
3 3iwp_A Copper homeostasis prot 100.0 1.7E-56 5.9E-61 375.5 16.4 136 6-142 36-171 (287)
4 1rd5_A Tryptophan synthase alp 98.7 2.5E-08 8.7E-13 79.9 6.7 100 19-136 35-155 (262)
5 1geq_A Tryptophan synthase alp 98.4 5E-07 1.7E-11 71.1 5.7 78 20-106 23-119 (248)
6 1xm3_A Thiazole biosynthesis p 97.4 0.00041 1.4E-08 56.1 7.5 88 12-122 130-227 (264)
7 2w6r_A Imidazole glycerol phos 97.3 0.00079 2.7E-08 53.1 8.2 93 17-123 31-124 (266)
8 1vc4_A Indole-3-glycerol phosp 97.1 0.0016 5.6E-08 52.6 7.9 84 19-123 68-151 (254)
9 1qop_A Tryptophan synthase alp 97.0 0.0013 4.3E-08 53.1 6.3 79 19-105 34-132 (268)
10 3q58_A N-acetylmannosamine-6-p 96.9 0.0032 1.1E-07 50.1 7.9 69 20-104 40-110 (229)
11 3q58_A N-acetylmannosamine-6-p 96.9 0.0076 2.6E-07 47.9 9.8 93 10-121 130-226 (229)
12 3tsm_A IGPS, indole-3-glycerol 96.9 0.0069 2.4E-07 49.8 9.8 85 20-125 83-168 (272)
13 2ekc_A AQ_1548, tryptophan syn 96.9 0.0035 1.2E-07 50.4 7.9 91 19-123 34-144 (262)
14 1xi3_A Thiamine phosphate pyro 96.9 0.0056 1.9E-07 46.2 8.6 98 9-123 108-211 (215)
15 3igs_A N-acetylmannosamine-6-p 96.8 0.0038 1.3E-07 49.7 7.9 69 20-104 40-110 (232)
16 1wv2_A Thiazole moeity, thiazo 96.8 0.0076 2.6E-07 50.0 9.3 79 11-103 138-217 (265)
17 1w8s_A FBP aldolase, fructose- 96.6 0.02 6.9E-07 46.2 10.8 100 20-128 96-200 (263)
18 3qja_A IGPS, indole-3-glycerol 96.6 0.0082 2.8E-07 49.1 8.5 91 14-121 167-261 (272)
19 3vnd_A TSA, tryptophan synthas 96.6 0.0027 9.2E-08 52.0 5.3 79 19-105 35-133 (267)
20 3igs_A N-acetylmannosamine-6-p 96.6 0.023 7.8E-07 45.1 10.6 78 10-102 130-210 (232)
21 2tps_A Protein (thiamin phosph 96.6 0.013 4.3E-07 44.8 8.7 97 10-123 117-221 (227)
22 2v82_A 2-dehydro-3-deoxy-6-pho 96.5 0.006 2.1E-07 46.6 6.5 65 20-103 23-88 (212)
23 3ngf_A AP endonuclease, family 96.5 0.075 2.6E-06 41.2 12.8 103 20-130 27-150 (269)
24 3qja_A IGPS, indole-3-glycerol 96.5 0.0082 2.8E-07 49.1 7.5 86 20-126 76-164 (272)
25 1thf_D HISF protein; thermophI 96.5 0.0034 1.1E-07 49.0 5.0 88 19-123 33-121 (253)
26 3kws_A Putative sugar isomeras 96.5 0.056 1.9E-06 42.1 12.0 106 20-130 42-165 (287)
27 1wa3_A 2-keto-3-deoxy-6-phosph 96.4 0.0049 1.7E-07 46.8 5.6 95 10-122 63-200 (205)
28 2nv1_A Pyridoxal biosynthesis 96.4 0.025 8.7E-07 46.0 10.0 72 15-100 27-105 (305)
29 2gjl_A Hypothetical protein PA 96.4 0.014 4.9E-07 47.8 8.5 104 14-133 123-234 (328)
30 3b0p_A TRNA-dihydrouridine syn 96.3 0.05 1.7E-06 45.5 11.7 114 10-128 60-201 (350)
31 1yxy_A Putative N-acetylmannos 96.3 0.029 9.9E-07 43.3 9.6 91 12-121 136-231 (234)
32 1ypf_A GMP reductase; GUAC, pu 96.3 0.019 6.4E-07 47.7 9.0 79 10-102 151-239 (336)
33 1yad_A Regulatory protein TENI 96.3 0.025 8.7E-07 43.4 9.0 98 9-123 110-213 (221)
34 1x1o_A Nicotinate-nucleotide p 96.3 0.011 3.9E-07 48.9 7.3 79 10-111 197-278 (286)
35 3tqv_A Nicotinate-nucleotide p 96.3 0.0082 2.8E-07 50.1 6.5 77 10-107 199-275 (287)
36 1yxy_A Putative N-acetylmannos 96.2 0.045 1.5E-06 42.2 10.2 93 20-128 40-137 (234)
37 3obe_A Sugar phosphate isomera 96.2 0.093 3.2E-06 42.0 12.3 107 21-130 41-169 (305)
38 2y88_A Phosphoribosyl isomeras 96.2 0.012 4E-07 45.6 6.7 88 17-122 32-120 (244)
39 1o4u_A Type II quinolic acid p 96.2 0.007 2.4E-07 50.2 5.5 75 10-107 194-273 (285)
40 3paj_A Nicotinate-nucleotide p 96.1 0.0083 2.8E-07 50.8 6.0 77 10-107 232-308 (320)
41 1ka9_F Imidazole glycerol phos 96.1 0.0094 3.2E-07 46.3 5.7 87 19-122 34-121 (252)
42 3o63_A Probable thiamine-phosp 96.1 0.033 1.1E-06 44.7 9.0 97 9-121 135-238 (243)
43 1jub_A Dihydroorotate dehydrog 96.1 0.027 9.1E-07 45.5 8.5 82 11-101 97-191 (311)
44 3bo9_A Putative nitroalkan dio 96.0 0.028 9.5E-07 46.4 8.4 103 14-132 129-237 (326)
45 2z6i_A Trans-2-enoyl-ACP reduc 96.0 0.031 1.1E-06 46.0 8.7 106 12-133 113-224 (332)
46 1z41_A YQJM, probable NADH-dep 96.0 0.1 3.5E-06 43.2 11.8 96 20-122 148-276 (338)
47 1h5y_A HISF; histidine biosynt 96.0 0.01 3.5E-07 45.3 5.3 73 17-104 34-108 (253)
48 3bw2_A 2-nitropropane dioxygen 96.0 0.047 1.6E-06 45.5 9.7 107 12-134 148-271 (369)
49 2v82_A 2-dehydro-3-deoxy-6-pho 95.9 0.021 7.2E-07 43.5 7.0 91 11-123 105-201 (212)
50 1p0k_A Isopentenyl-diphosphate 95.9 0.078 2.7E-06 43.8 11.0 73 18-102 128-209 (349)
51 1k77_A EC1530, hypothetical pr 95.9 0.28 9.7E-06 37.2 13.3 105 20-131 19-144 (260)
52 1vzw_A Phosphoribosyl isomeras 95.8 0.016 5.3E-07 45.1 6.0 86 19-122 35-121 (244)
53 1ka9_F Imidazole glycerol phos 95.8 0.058 2E-06 41.8 9.1 89 19-122 155-245 (252)
54 4gj1_A 1-(5-phosphoribosyl)-5- 95.8 0.18 6.1E-06 40.1 12.1 109 16-130 84-202 (243)
55 1y0e_A Putative N-acetylmannos 95.8 0.085 2.9E-06 40.2 9.9 70 20-105 27-98 (223)
56 2zbt_A Pyridoxal biosynthesis 95.8 0.033 1.1E-06 44.9 7.8 76 16-103 132-239 (297)
57 1h5y_A HISF; histidine biosynt 95.7 0.096 3.3E-06 39.8 10.0 89 18-121 156-246 (253)
58 1ujp_A Tryptophan synthase alp 95.7 0.01 3.5E-07 48.4 4.7 78 19-105 33-129 (271)
59 4adt_A Pyridoxine biosynthetic 95.7 0.079 2.7E-06 44.0 10.0 95 14-122 130-258 (297)
60 1p4c_A L(+)-mandelate dehydrog 95.7 0.019 6.4E-07 48.7 6.2 73 16-102 233-307 (380)
61 3nav_A Tryptophan synthase alp 95.7 0.025 8.6E-07 46.4 6.8 97 19-129 37-155 (271)
62 3l0g_A Nicotinate-nucleotide p 95.7 0.012 4E-07 49.5 4.8 77 10-107 208-284 (300)
63 3f4w_A Putative hexulose 6 pho 95.6 0.012 4.1E-07 44.6 4.5 94 10-121 106-206 (211)
64 3o07_A Pyridoxine biosynthesis 95.5 0.051 1.7E-06 45.6 8.2 77 14-102 120-229 (291)
65 3tsm_A IGPS, indole-3-glycerol 95.5 0.05 1.7E-06 44.7 8.1 91 14-120 174-267 (272)
66 1jvn_A Glutamine, bifunctional 95.5 0.092 3.2E-06 46.6 10.2 92 16-122 452-546 (555)
67 2yw3_A 4-hydroxy-2-oxoglutarat 95.5 0.057 1.9E-06 42.0 7.9 86 16-123 111-202 (207)
68 2g0w_A LMO2234 protein; putati 95.4 0.083 2.8E-06 41.7 8.8 105 20-131 40-155 (296)
69 3lmz_A Putative sugar isomeras 95.4 0.066 2.3E-06 41.2 8.0 98 20-132 34-134 (257)
70 2htm_A Thiazole biosynthesis p 95.4 0.069 2.3E-06 44.3 8.4 80 10-103 126-208 (268)
71 1ep3_A Dihydroorotate dehydrog 95.4 0.026 9E-07 45.1 5.8 80 11-101 102-195 (311)
72 2x7v_A Probable endonuclease 4 95.3 0.35 1.2E-05 37.1 12.0 110 20-131 16-145 (287)
73 1qap_A Quinolinic acid phospho 95.3 0.059 2E-06 44.7 8.0 73 11-106 210-284 (296)
74 2zbt_A Pyridoxal biosynthesis 95.3 0.15 5.2E-06 40.9 10.2 70 16-99 28-104 (297)
75 1qpo_A Quinolinate acid phosph 95.3 0.05 1.7E-06 45.0 7.4 82 11-111 196-279 (284)
76 1eep_A Inosine 5'-monophosphat 95.3 0.087 3E-06 44.5 9.0 92 18-128 154-260 (404)
77 1qtw_A Endonuclease IV; DNA re 95.3 0.33 1.1E-05 37.3 11.7 110 20-131 16-146 (285)
78 4fo4_A Inosine 5'-monophosphat 95.3 0.07 2.4E-06 45.4 8.5 72 15-102 156-240 (366)
79 1i60_A IOLI protein; beta barr 95.3 0.43 1.5E-05 36.3 12.2 109 20-131 18-143 (278)
80 3tdn_A FLR symmetric alpha-bet 95.2 0.069 2.4E-06 41.7 7.8 74 17-104 36-110 (247)
81 1y0e_A Putative N-acetylmannos 95.2 0.095 3.2E-06 39.9 8.4 92 12-121 122-220 (223)
82 4fxs_A Inosine-5'-monophosphat 95.2 0.094 3.2E-06 45.9 9.4 95 17-128 231-338 (496)
83 4adt_A Pyridoxine biosynthetic 95.2 0.12 4.1E-06 42.9 9.6 71 15-99 27-104 (297)
84 2qul_A D-tagatose 3-epimerase; 95.2 0.094 3.2E-06 40.5 8.4 112 18-131 18-153 (290)
85 3vni_A Xylose isomerase domain 95.2 0.16 5.5E-06 39.4 9.7 109 20-131 21-152 (294)
86 3sgz_A Hydroxyacid oxidase 2; 95.2 0.082 2.8E-06 45.0 8.5 72 17-102 226-301 (352)
87 1rpx_A Protein (ribulose-phosp 95.1 0.22 7.7E-06 38.2 10.3 71 19-104 26-100 (230)
88 3ffs_A Inosine-5-monophosphate 95.1 0.065 2.2E-06 46.3 7.8 74 15-102 191-275 (400)
89 4avf_A Inosine-5'-monophosphat 95.1 0.12 4.1E-06 45.1 9.6 94 17-128 229-336 (490)
90 3aal_A Probable endonuclease 4 95.0 0.46 1.6E-05 37.4 12.1 84 20-104 22-118 (303)
91 3tva_A Xylose isomerase domain 95.0 0.68 2.3E-05 35.8 12.9 112 20-132 25-160 (290)
92 1yx1_A Hypothetical protein PA 95.0 0.11 3.8E-06 40.1 8.2 100 21-130 28-131 (264)
93 1vzw_A Phosphoribosyl isomeras 94.9 0.13 4.4E-06 39.8 8.4 99 16-128 84-194 (244)
94 3gr7_A NADPH dehydrogenase; fl 94.9 0.18 6.3E-06 41.9 9.9 104 20-128 148-281 (340)
95 1mzh_A Deoxyribose-phosphate a 94.9 0.13 4.3E-06 40.4 8.4 100 20-127 74-178 (225)
96 2qjg_A Putative aldolase MJ040 94.9 0.33 1.1E-05 38.1 10.8 100 19-134 102-212 (273)
97 2hk0_A D-psicose 3-epimerase; 94.9 0.25 8.5E-06 39.0 10.1 111 18-131 38-171 (309)
98 3ayv_A Putative uncharacterize 94.8 0.26 8.8E-06 37.6 9.8 111 14-131 7-137 (254)
99 3qc0_A Sugar isomerase; TIM ba 94.8 0.085 2.9E-06 40.3 7.0 104 20-130 22-142 (275)
100 3cny_A Inositol catabolism pro 94.8 0.54 1.9E-05 36.3 11.7 100 21-131 36-161 (301)
101 2q02_A Putative cytoplasmic pr 94.7 1 3.4E-05 34.2 13.9 107 20-130 23-139 (272)
102 3o07_A Pyridoxine biosynthesis 94.7 0.25 8.7E-06 41.4 10.2 75 9-99 13-94 (291)
103 2w6r_A Imidazole glycerol phos 94.7 0.13 4.5E-06 40.2 8.1 87 19-120 159-247 (266)
104 4ad1_A Glycosyl hydrolase fami 94.7 0.018 6E-07 49.3 3.2 56 75-130 97-154 (380)
105 3l23_A Sugar phosphate isomera 94.7 0.63 2.2E-05 37.0 12.1 111 18-130 30-165 (303)
106 3l5l_A Xenobiotic reductase A; 94.6 0.52 1.8E-05 39.4 11.9 103 20-127 162-298 (363)
107 2fli_A Ribulose-phosphate 3-ep 94.6 0.14 4.7E-06 38.8 7.7 70 19-106 19-95 (220)
108 2nli_A Lactate oxidase; flavoe 94.5 0.13 4.4E-06 43.5 8.1 72 17-102 238-313 (368)
109 3khj_A Inosine-5-monophosphate 94.5 0.14 4.7E-06 43.3 8.2 72 15-102 152-236 (361)
110 1thf_D HISF protein; thermophI 94.5 0.37 1.3E-05 37.2 10.1 89 19-122 154-244 (253)
111 1gox_A (S)-2-hydroxy-acid oxid 94.4 0.14 4.8E-06 43.0 8.1 73 16-102 233-309 (370)
112 1jcn_A Inosine monophosphate d 94.4 0.1 3.5E-06 45.4 7.4 73 15-103 303-388 (514)
113 3u0h_A Xylose isomerase domain 94.4 0.064 2.2E-06 41.1 5.6 107 20-130 20-141 (281)
114 3hgj_A Chromate reductase; TIM 94.4 0.33 1.1E-05 40.4 10.3 96 20-122 156-287 (349)
115 1me8_A Inosine-5'-monophosphat 94.3 0.12 4E-06 45.2 7.5 73 15-103 291-382 (503)
116 2y88_A Phosphoribosyl isomeras 94.3 0.21 7.1E-06 38.4 8.1 70 19-102 152-225 (244)
117 3usb_A Inosine-5'-monophosphat 94.2 0.17 5.7E-06 44.6 8.3 74 15-104 304-390 (511)
118 3glc_A Aldolase LSRF; TIM barr 94.2 0.22 7.6E-06 41.2 8.6 95 21-128 130-227 (295)
119 2nzl_A Hydroxyacid oxidase 1; 94.2 0.16 5.4E-06 43.4 7.9 73 16-102 260-336 (392)
120 4avf_A Inosine-5'-monophosphat 94.1 0.16 5.4E-06 44.4 7.8 72 15-102 277-361 (490)
121 3r2g_A Inosine 5'-monophosphat 94.0 0.15 5.3E-06 43.4 7.6 70 16-102 149-228 (361)
122 2qw5_A Xylose isomerase-like T 94.0 1.1 3.6E-05 35.8 12.2 80 20-103 35-129 (335)
123 2c6q_A GMP reductase 2; TIM ba 94.0 0.17 5.8E-06 42.5 7.7 73 15-103 168-253 (351)
124 4a29_A Engineered retro-aldol 94.0 0.6 2E-05 38.4 10.7 89 17-126 64-155 (258)
125 2b7n_A Probable nicotinate-nuc 94.0 0.11 3.7E-06 42.3 6.3 76 10-105 183-260 (273)
126 1p0k_A Isopentenyl-diphosphate 94.0 0.19 6.5E-06 41.4 7.8 72 17-102 190-280 (349)
127 3b0p_A TRNA-dihydrouridine syn 94.0 0.17 5.7E-06 42.3 7.5 69 19-102 147-225 (350)
128 1vcf_A Isopentenyl-diphosphate 93.9 0.17 5.8E-06 41.6 7.3 72 17-102 193-285 (332)
129 3gnn_A Nicotinate-nucleotide p 93.7 0.15 5.2E-06 42.6 6.8 78 10-108 210-287 (298)
130 3p6l_A Sugar phosphate isomera 93.7 0.41 1.4E-05 36.6 8.8 98 20-132 26-136 (262)
131 2e6f_A Dihydroorotate dehydrog 93.7 0.14 4.7E-06 41.4 6.4 83 11-102 97-195 (314)
132 3cqj_A L-ribulose-5-phosphate 93.7 0.76 2.6E-05 35.7 10.5 111 20-131 34-167 (295)
133 1qo2_A Molecule: N-((5-phospho 93.5 0.055 1.9E-06 42.0 3.5 71 18-104 32-104 (241)
134 2jbm_A Nicotinate-nucleotide p 93.5 0.088 3E-06 43.6 4.9 74 10-106 198-276 (299)
135 1qo2_A Molecule: N-((5-phospho 93.4 0.17 5.9E-06 39.2 6.3 98 16-128 82-192 (241)
136 1jcn_A Inosine monophosphate d 93.4 0.4 1.4E-05 41.6 9.3 69 17-103 255-325 (514)
137 4acy_A Endo-alpha-mannosidase; 93.4 0.05 1.7E-06 46.7 3.4 56 75-131 96-153 (382)
138 3aam_A Endonuclease IV, endoiv 93.4 0.46 1.6E-05 36.5 8.7 109 20-131 18-140 (270)
139 4fo4_A Inosine 5'-monophosphat 93.4 0.48 1.6E-05 40.2 9.4 93 17-128 108-215 (366)
140 4fxs_A Inosine-5'-monophosphat 93.4 0.2 6.7E-06 43.9 7.2 72 15-102 279-363 (496)
141 1h1y_A D-ribulose-5-phosphate 93.4 0.25 8.6E-06 38.3 7.2 72 19-107 22-99 (228)
142 3ceu_A Thiamine phosphate pyro 93.3 0.36 1.2E-05 37.0 7.8 78 9-102 88-172 (210)
143 1kbi_A Cytochrome B2, L-LCR; f 93.2 0.28 9.6E-06 43.3 8.0 70 16-102 351-432 (511)
144 1eep_A Inosine 5'-monophosphat 93.2 0.28 9.5E-06 41.4 7.7 72 15-102 201-285 (404)
145 2zvr_A Uncharacterized protein 93.2 1.2 4.2E-05 34.5 11.0 105 21-130 46-169 (290)
146 1tqj_A Ribulose-phosphate 3-ep 93.2 0.43 1.5E-05 37.4 8.3 68 20-104 21-94 (230)
147 3ffs_A Inosine-5-monophosphate 93.1 0.54 1.8E-05 40.5 9.5 92 18-127 145-249 (400)
148 2ftp_A Hydroxymethylglutaryl-C 93.0 1.2 4E-05 36.2 11.0 111 15-131 82-210 (302)
149 2f6u_A GGGPS, (S)-3-O-geranylg 93.0 0.18 6.1E-06 40.6 5.9 68 17-108 21-90 (234)
150 3glc_A Aldolase LSRF; TIM barr 93.0 0.43 1.5E-05 39.5 8.3 65 21-103 194-258 (295)
151 2cw6_A Hydroxymethylglutaryl-C 92.9 0.5 1.7E-05 38.3 8.5 110 14-130 78-206 (298)
152 2nv1_A Pyridoxal biosynthesis 92.7 0.44 1.5E-05 38.6 8.0 95 14-122 130-258 (305)
153 3tdn_A FLR symmetric alpha-bet 92.7 0.02 6.9E-07 44.8 0.0 68 20-102 160-229 (247)
154 1vrd_A Inosine-5'-monophosphat 92.7 0.89 3E-05 39.1 10.2 67 19-103 239-307 (494)
155 2qjg_A Putative aldolase MJ040 92.6 0.69 2.4E-05 36.3 8.7 90 18-123 167-258 (273)
156 3jr2_A Hexulose-6-phosphate sy 92.5 0.05 1.7E-06 42.0 2.0 69 17-102 120-194 (218)
157 1wbh_A KHG/KDPG aldolase; lyas 92.4 0.11 3.9E-06 40.6 4.0 85 16-119 116-205 (214)
158 1nvm_A HOA, 4-hydroxy-2-oxoval 92.3 0.95 3.2E-05 37.5 9.7 91 24-130 38-139 (345)
159 1zfj_A Inosine monophosphate d 92.3 0.38 1.3E-05 41.2 7.4 87 18-122 234-332 (491)
160 1vc4_A Indole-3-glycerol phosp 92.2 0.27 9.3E-06 39.4 6.0 73 14-102 159-236 (254)
161 1viz_A PCRB protein homolog; s 92.1 0.36 1.2E-05 38.9 6.6 68 17-103 139-211 (240)
162 1ydn_A Hydroxymethylglutaryl-C 92.1 0.66 2.2E-05 37.3 8.2 112 14-131 77-206 (295)
163 3khj_A Inosine-5-monophosphate 92.1 0.77 2.6E-05 38.7 8.9 67 18-102 106-173 (361)
164 1vhc_A Putative KHG/KDPG aldol 92.0 0.5 1.7E-05 37.3 7.3 85 16-119 117-206 (224)
165 1ep3_A Dihydroorotate dehydrog 92.0 0.3 1E-05 38.9 6.0 71 18-102 177-270 (311)
166 1ydo_A HMG-COA lyase; TIM-barr 91.9 1.1 3.9E-05 36.7 9.6 112 12-130 77-207 (307)
167 2qr6_A IMP dehydrogenase/GMP r 91.8 0.27 9.4E-06 41.2 5.9 74 15-103 218-307 (393)
168 3dx5_A Uncharacterized protein 91.7 2.2 7.6E-05 32.7 10.6 108 20-131 19-143 (286)
169 3o1n_A 3-dehydroquinate dehydr 91.7 2.6 9E-05 34.2 11.5 118 12-138 44-174 (276)
170 2f6u_A GGGPS, (S)-3-O-geranylg 91.7 0.082 2.8E-06 42.5 2.4 67 18-103 147-219 (234)
171 1xi3_A Thiamine phosphate pyro 91.6 0.15 5.1E-06 38.2 3.7 65 19-105 29-96 (215)
172 3bdk_A D-mannonate dehydratase 91.6 2 6.7E-05 36.6 11.0 84 17-101 31-123 (386)
173 3oa3_A Aldolase; structural ge 91.5 0.39 1.3E-05 40.0 6.4 79 8-98 176-259 (288)
174 1f76_A Dihydroorotate dehydrog 91.5 0.76 2.6E-05 37.4 8.1 66 28-102 164-245 (336)
175 2zds_A Putative DNA-binding pr 91.4 1.6 5.4E-05 34.3 9.6 81 18-102 16-131 (340)
176 1xim_A D-xylose isomerase; iso 91.3 1.2 4.1E-05 37.0 9.3 112 20-131 37-181 (393)
177 1vhn_A Putative flavin oxidore 91.3 0.52 1.8E-05 38.4 6.8 83 10-102 61-160 (318)
178 1bxb_A Xylose isomerase; xylos 91.3 1.1 3.8E-05 37.1 9.0 114 18-131 34-181 (387)
179 1vrd_A Inosine-5'-monophosphat 91.2 1.1 3.6E-05 38.6 9.1 71 15-102 285-369 (494)
180 1to3_A Putative aldolase YIHT; 91.1 0.61 2.1E-05 38.4 7.2 68 21-102 182-254 (304)
181 3vkj_A Isopentenyl-diphosphate 91.0 0.69 2.4E-05 39.2 7.6 69 17-102 199-296 (368)
182 1i4n_A Indole-3-glycerol phosp 91.0 0.6 2E-05 37.8 6.9 96 11-121 152-249 (251)
183 3usb_A Inosine-5'-monophosphat 91.0 1 3.5E-05 39.5 8.9 102 10-128 245-363 (511)
184 3zwt_A Dihydroorotate dehydrog 91.0 0.5 1.7E-05 40.0 6.7 70 20-103 238-328 (367)
185 1muw_A Xylose isomerase; atomi 90.9 1.4 4.6E-05 36.5 9.2 112 20-131 37-181 (386)
186 2yzr_A Pyridoxal biosynthesis 90.9 1.2 4.1E-05 37.8 8.9 72 15-100 23-101 (330)
187 1ypf_A GMP reductase; GUAC, pu 90.9 0.57 1.9E-05 38.7 6.8 68 19-102 108-177 (336)
188 1vem_A Beta-amylase; beta-alph 90.9 0.22 7.5E-06 44.1 4.5 67 58-128 9-83 (516)
189 3c2e_A Nicotinate-nucleotide p 90.8 0.22 7.6E-06 41.0 4.2 79 10-107 200-282 (294)
190 3fok_A Uncharacterized protein 90.7 0.22 7.6E-06 41.9 4.2 98 21-129 133-242 (307)
191 1ub3_A Aldolase protein; schif 90.7 0.61 2.1E-05 36.9 6.5 75 8-97 121-200 (220)
192 1rd5_A Tryptophan synthase alp 90.7 0.88 3E-05 35.7 7.5 69 19-102 156-230 (262)
193 2nx9_A Oxaloacetate decarboxyl 90.2 6.8 0.00023 34.2 13.4 98 20-130 104-207 (464)
194 2p10_A MLL9387 protein; putati 90.1 1.2 4.2E-05 37.1 8.1 81 11-102 165-259 (286)
195 1rpx_A Protein (ribulose-phosp 90.0 0.23 8E-06 38.1 3.5 87 17-120 128-225 (230)
196 2qiw_A PEP phosphonomutase; st 89.9 0.89 3E-05 36.8 7.0 68 18-104 170-238 (255)
197 1w8s_A FBP aldolase, fructose- 89.9 2.3 8E-05 34.0 9.5 85 22-123 165-252 (263)
198 3ajx_A 3-hexulose-6-phosphate 89.9 0.88 3E-05 34.0 6.6 67 18-102 115-186 (207)
199 1jub_A Dihydroorotate dehydrog 89.8 0.34 1.2E-05 38.9 4.5 67 22-102 178-271 (311)
200 3rjz_A N-type ATP pyrophosphat 89.8 0.19 6.5E-06 40.5 2.9 83 17-108 16-103 (237)
201 1xla_A D-xylose isomerase; iso 89.7 1.7 5.7E-05 36.1 8.7 112 19-130 36-180 (394)
202 2qr6_A IMP dehydrogenase/GMP r 89.7 3 0.0001 34.8 10.3 88 19-121 168-265 (393)
203 1mzh_A Deoxyribose-phosphate a 89.6 0.83 2.8E-05 35.7 6.4 72 11-98 123-200 (225)
204 1i4n_A Indole-3-glycerol phosp 89.6 2.7 9.3E-05 33.9 9.6 84 21-125 66-149 (251)
205 2gou_A Oxidoreductase, FMN-bin 89.5 1.5 5.1E-05 36.7 8.3 101 20-122 165-292 (365)
206 1mxs_A KDPG aldolase; 2-keto-3 89.5 0.45 1.6E-05 37.5 4.9 86 16-120 126-216 (225)
207 1jvn_A Glutamine, bifunctional 89.2 0.39 1.3E-05 42.6 4.7 107 20-128 351-500 (555)
208 2yr1_A 3-dehydroquinate dehydr 89.2 7.3 0.00025 31.1 12.9 107 21-138 37-154 (257)
209 3nav_A Tryptophan synthase alp 89.2 1.8 6E-05 35.3 8.3 72 18-103 162-238 (271)
210 3qz6_A HPCH/HPAI aldolase; str 89.1 0.91 3.1E-05 36.5 6.5 87 17-123 25-111 (261)
211 2agk_A 1-(5-phosphoribosyl)-5- 89.1 1.1 3.6E-05 36.0 6.9 84 19-123 41-126 (260)
212 1geq_A Tryptophan synthase alp 89.0 0.87 3E-05 35.1 6.1 72 17-102 143-220 (248)
213 1vyr_A Pentaerythritol tetrani 88.6 1.3 4.5E-05 37.1 7.4 101 20-122 165-293 (364)
214 3f4w_A Putative hexulose 6 pho 88.4 1.6 5.3E-05 32.7 7.1 94 13-128 4-107 (211)
215 4h3d_A 3-dehydroquinate dehydr 88.4 2 6.9E-05 34.4 8.1 112 17-139 29-155 (258)
216 2tps_A Protein (thiamin phosph 88.0 3.4 0.00012 31.0 8.8 84 20-127 85-175 (227)
217 1f76_A Dihydroorotate dehydrog 88.0 1.1 3.8E-05 36.4 6.3 67 22-102 231-318 (336)
218 3w01_A Heptaprenylglyceryl pho 87.9 0.7 2.4E-05 37.3 5.0 71 29-121 159-230 (235)
219 2e6f_A Dihydroorotate dehydrog 87.3 0.54 1.8E-05 37.8 4.1 71 18-102 172-273 (314)
220 3vav_A 3-methyl-2-oxobutanoate 87.3 4.8 0.00016 33.1 9.8 76 23-106 113-197 (275)
221 2xfr_A Beta-amylase; hydrolase 87.3 0.6 2.1E-05 42.0 4.6 74 59-136 9-93 (535)
222 1zlp_A PSR132, petal death pro 87.3 4 0.00014 34.1 9.5 67 19-103 192-258 (318)
223 3cwo_X Beta/alpha-barrel prote 87.2 5.1 0.00017 29.2 9.1 90 20-123 134-224 (237)
224 1gte_A Dihydropyrimidine dehyd 87.2 3.3 0.00011 38.9 9.9 69 22-101 654-734 (1025)
225 1viz_A PCRB protein homolog; s 87.1 0.69 2.3E-05 37.2 4.5 46 17-66 21-68 (240)
226 3qxb_A Putative xylose isomera 87.1 2 6.9E-05 33.8 7.3 78 23-101 42-133 (316)
227 3sr7_A Isopentenyl-diphosphate 87.1 1.2 4.2E-05 37.7 6.3 70 17-103 218-308 (365)
228 2r14_A Morphinone reductase; H 87.0 2.6 8.8E-05 35.6 8.3 81 20-103 170-276 (377)
229 2fli_A Ribulose-phosphate 3-ep 87.0 0.84 2.9E-05 34.4 4.8 88 17-121 119-217 (220)
230 1vhn_A Putative flavin oxidore 86.9 0.67 2.3E-05 37.8 4.4 69 19-102 143-213 (318)
231 1qop_A Tryptophan synthase alp 86.9 3.9 0.00013 32.4 8.9 88 19-122 160-262 (268)
232 3r2g_A Inosine 5'-monophosphat 86.8 1.5 5.1E-05 37.2 6.7 66 19-102 102-169 (361)
233 1ydn_A Hydroxymethylglutaryl-C 86.8 1.6 5.6E-05 35.0 6.7 63 22-101 32-98 (295)
234 2o7s_A DHQ-SDH PR, bifunctiona 86.5 3.6 0.00012 35.7 9.1 74 21-99 22-96 (523)
235 1sfl_A 3-dehydroquinate dehydr 86.3 11 0.00036 29.7 13.7 108 20-138 21-140 (238)
236 1vyr_A Pentaerythritol tetrani 86.2 3.7 0.00013 34.3 8.8 66 22-102 257-323 (364)
237 3ktc_A Xylose isomerase; putat 86.1 11 0.00039 29.8 11.9 106 20-129 37-166 (333)
238 2zsk_A PH1733, 226AA long hypo 86.1 0.75 2.6E-05 35.4 4.1 66 41-108 7-86 (226)
239 1wdp_A Beta-amylase; (beta/alp 86.0 1.5 5.2E-05 39.1 6.5 75 58-136 10-95 (495)
240 3ih1_A Methylisocitrate lyase; 85.9 5.8 0.0002 32.9 9.7 100 20-131 108-218 (305)
241 2nx9_A Oxaloacetate decarboxyl 85.8 0.89 3.1E-05 39.8 4.9 83 20-116 162-250 (464)
242 3vnd_A TSA, tryptophan synthas 85.6 4.5 0.00015 32.7 8.7 71 18-102 160-235 (267)
243 3tty_A Beta-GAL, beta-galactos 85.5 0.47 1.6E-05 43.0 3.0 59 71-129 12-78 (675)
244 1zfj_A Inosine monophosphate d 85.5 3.8 0.00013 34.9 8.7 75 15-103 281-366 (491)
245 3cu2_A Ribulose-5-phosphate 3- 85.4 0.93 3.2E-05 36.2 4.5 83 20-125 30-116 (237)
246 1pii_A N-(5'phosphoribosyl)ant 85.4 1.6 5.6E-05 38.1 6.3 94 11-119 159-253 (452)
247 1zco_A 2-dehydro-3-deoxyphosph 85.3 9.7 0.00033 30.6 10.6 95 18-123 142-256 (262)
248 1ps9_A 2,4-dienoyl-COA reducta 85.3 0.7 2.4E-05 41.0 4.0 77 20-102 145-248 (671)
249 1xg4_A Probable methylisocitra 85.2 4.6 0.00016 33.2 8.8 67 19-103 170-236 (295)
250 1icp_A OPR1, 12-oxophytodienoa 85.2 3 0.0001 35.1 7.7 79 20-102 171-276 (376)
251 3gr7_A NADPH dehydrogenase; fl 85.1 4 0.00014 33.8 8.4 69 20-102 233-307 (340)
252 1xg4_A Probable methylisocitra 85.1 10 0.00034 31.2 10.7 101 20-131 98-210 (295)
253 3vk5_A MOEO5; TIM barrel, tran 85.1 3.6 0.00012 34.2 8.0 65 22-104 192-258 (286)
254 3nl6_A Thiamine biosynthetic b 85.0 3.5 0.00012 36.6 8.4 100 9-124 108-231 (540)
255 2h6r_A Triosephosphate isomera 84.9 2.5 8.7E-05 32.7 6.7 79 10-102 112-199 (219)
256 1kbi_A Cytochrome B2, L-LCR; f 84.9 11 0.00038 33.0 11.5 61 47-122 331-395 (511)
257 4e38_A Keto-hydroxyglutarate-a 84.8 1.9 6.4E-05 34.5 6.0 87 16-121 134-225 (232)
258 2fiq_A Putative tagatose 6-pho 84.8 9.6 0.00033 33.1 10.9 114 11-125 16-155 (420)
259 1rqb_A Transcarboxylase 5S sub 84.8 19 0.00065 32.1 13.1 99 19-130 120-226 (539)
260 3eoo_A Methylisocitrate lyase; 84.8 15 0.00053 30.2 12.1 101 20-131 102-214 (298)
261 4ab4_A Xenobiotic reductase B; 84.7 3.7 0.00013 34.5 8.1 79 20-102 157-262 (362)
262 2vws_A YFAU, 2-keto-3-deoxy su 84.6 5.7 0.0002 31.7 8.9 89 14-123 24-113 (267)
263 3lye_A Oxaloacetate acetyl hyd 84.5 12 0.0004 31.1 10.9 102 20-131 107-222 (307)
264 4ef8_A Dihydroorotate dehydrog 84.4 0.96 3.3E-05 38.2 4.3 81 11-101 130-227 (354)
265 3sr7_A Isopentenyl-diphosphate 84.2 2.5 8.4E-05 35.8 6.8 72 18-102 156-237 (365)
266 1m3u_A 3-methyl-2-oxobutanoate 84.2 7.3 0.00025 31.8 9.4 86 23-122 101-195 (264)
267 1fa2_A Beta-amylase; TIM barre 84.2 1.4 4.9E-05 39.3 5.4 75 58-136 11-96 (498)
268 2nzl_A Hydroxyacid oxidase 1; 84.0 8.5 0.00029 32.6 10.1 66 47-128 240-311 (392)
269 3zwt_A Dihydroorotate dehydrog 83.9 1.9 6.6E-05 36.3 6.0 66 27-101 174-253 (367)
270 3inp_A D-ribulose-phosphate 3- 83.5 15 0.00053 29.2 11.2 71 20-107 44-121 (246)
271 3ctl_A D-allulose-6-phosphate 83.3 6.6 0.00023 30.9 8.6 71 18-105 14-90 (231)
272 1u5h_A CITE; TIM barrel, struc 83.3 5.4 0.00018 32.0 8.2 84 9-104 8-93 (273)
273 2gou_A Oxidoreductase, FMN-bin 83.2 4.3 0.00015 33.9 7.9 66 22-102 256-322 (365)
274 2cw6_A Hydroxymethylglutaryl-C 83.1 7.3 0.00025 31.3 8.9 85 22-120 162-259 (298)
275 2agk_A 1-(5-phosphoribosyl)-5- 83.1 0.87 3E-05 36.5 3.4 105 21-129 89-210 (260)
276 2ze3_A DFA0005; organic waste 83.0 3.6 0.00012 33.5 7.1 63 19-103 171-233 (275)
277 3l9c_A 3-dehydroquinate dehydr 83.0 5.2 0.00018 32.3 8.0 90 7-101 34-129 (259)
278 1pii_A N-(5'phosphoribosyl)ant 82.9 8.3 0.00028 33.6 9.8 87 18-124 69-155 (452)
279 3vzx_A Heptaprenylglyceryl pho 82.8 5.4 0.00018 31.8 7.9 77 25-123 149-226 (228)
280 3bg3_A Pyruvate carboxylase, m 82.8 14 0.00048 34.0 11.6 100 19-131 200-312 (718)
281 2nli_A Lactate oxidase; flavoe 82.7 14 0.00047 31.0 10.8 68 46-128 216-288 (368)
282 3i65_A Dihydroorotate dehydrog 82.7 1.7 6E-05 37.6 5.3 75 19-102 201-303 (415)
283 2qiw_A PEP phosphonomutase; st 82.4 7.2 0.00025 31.3 8.6 97 19-123 96-204 (255)
284 1to3_A Putative aldolase YIHT; 82.4 6.1 0.00021 32.4 8.3 95 20-121 112-215 (304)
285 2atm_A Hyaluronoglucosaminidas 82.3 0.78 2.7E-05 39.0 2.9 57 59-120 254-313 (331)
286 3hbl_A Pyruvate carboxylase; T 81.7 14 0.00048 35.6 11.6 102 20-131 631-742 (1150)
287 3rmj_A 2-isopropylmalate synth 81.6 1.7 5.7E-05 36.8 4.8 67 20-99 161-233 (370)
288 1o66_A 3-methyl-2-oxobutanoate 81.5 8.7 0.0003 31.6 8.9 87 23-122 102-195 (275)
289 2ekc_A AQ_1548, tryptophan syn 81.5 6.9 0.00024 31.0 8.1 86 19-123 160-257 (262)
290 1gox_A (S)-2-hydroxy-acid oxid 81.2 22 0.00076 29.5 12.0 67 47-128 213-284 (370)
291 1h1y_A D-ribulose-5-phosphate 81.2 4.6 0.00016 31.0 6.8 89 17-121 123-220 (228)
292 2hbv_A 2-amino-3-carboxymucona 80.9 2.3 8E-05 33.9 5.2 50 83-132 128-179 (334)
293 3kru_A NADH:flavin oxidoreduct 80.9 4.7 0.00016 33.6 7.2 95 20-122 147-276 (343)
294 3ble_A Citramalate synthase fr 80.9 2 7E-05 35.5 4.9 66 21-99 174-242 (337)
295 3i65_A Dihydroorotate dehydrog 80.8 1.7 5.9E-05 37.6 4.6 68 21-102 288-374 (415)
296 1tqj_A Ribulose-phosphate 3-ep 80.8 1.4 4.6E-05 34.5 3.6 88 17-120 122-219 (230)
297 3gka_A N-ethylmaleimide reduct 80.6 7.8 0.00027 32.5 8.5 80 20-102 165-270 (361)
298 3dxi_A Putative aldolase; TIM 80.5 7.7 0.00026 32.1 8.4 96 22-131 30-134 (320)
299 3b8i_A PA4872 oxaloacetate dec 80.4 5.5 0.00019 32.7 7.4 66 18-103 170-235 (287)
300 3ble_A Citramalate synthase fr 80.1 11 0.00036 31.1 9.1 110 14-130 94-219 (337)
301 3bg3_A Pyruvate carboxylase, m 80.1 6.8 0.00023 36.1 8.6 71 48-125 164-236 (718)
302 3sgz_A Hydroxyacid oxidase 2; 80.0 26 0.00089 29.5 12.1 69 45-128 203-276 (352)
303 3ivs_A Homocitrate synthase, m 79.9 25 0.00086 30.3 11.7 106 15-130 109-229 (423)
304 3ih1_A Methylisocitrate lyase; 79.9 11 0.00036 31.3 9.0 67 19-103 178-244 (305)
305 3t7v_A Methylornithine synthas 79.6 6.2 0.00021 31.8 7.4 94 23-135 101-212 (350)
306 2hsa_B 12-oxophytodienoate red 79.5 6.8 0.00023 33.3 7.9 79 20-102 175-286 (402)
307 3ndo_A Deoxyribose-phosphate a 79.4 2.7 9.1E-05 33.7 5.0 74 20-100 84-164 (231)
308 3ngj_A Deoxyribose-phosphate a 79.4 2.8 9.5E-05 33.8 5.1 75 19-101 98-176 (239)
309 4gj1_A 1-(5-phosphoribosyl)-5- 79.0 14 0.00048 28.9 9.1 96 17-129 31-128 (243)
310 2hjp_A Phosphonopyruvate hydro 78.7 16 0.00055 29.9 9.7 103 20-131 94-212 (290)
311 3vkj_A Isopentenyl-diphosphate 78.7 3.5 0.00012 34.8 5.8 73 18-102 136-218 (368)
312 2egz_A 3-dehydroquinate dehydr 78.6 5.1 0.00018 31.2 6.4 64 15-84 8-76 (219)
313 3kts_A Glycerol uptake operon 78.5 3.9 0.00013 31.9 5.6 61 21-102 119-179 (192)
314 1oy0_A Ketopantoate hydroxymet 78.3 19 0.00065 29.6 10.0 111 9-130 34-155 (281)
315 3lab_A Putative KDPG (2-keto-3 78.2 5.7 0.0002 31.5 6.6 96 7-122 111-211 (217)
316 2h6r_A Triosephosphate isomera 78.0 4.2 0.00014 31.4 5.7 70 44-123 38-108 (219)
317 3w01_A Heptaprenylglyceryl pho 77.8 5.2 0.00018 32.2 6.3 46 18-67 25-72 (235)
318 2vc7_A Aryldialkylphosphatase; 77.7 12 0.00041 29.1 8.3 102 23-131 54-171 (314)
319 2uva_G Fatty acid synthase bet 77.6 1.4 4.8E-05 45.1 3.5 98 14-126 697-821 (2060)
320 1tv5_A Dhodehase, dihydroorota 77.6 6.1 0.00021 34.3 7.1 36 59-103 296-332 (443)
321 3hbl_A Pyruvate carboxylase; T 77.4 6.9 0.00024 37.7 8.0 66 20-98 696-763 (1150)
322 2c6q_A GMP reductase 2; TIM ba 77.3 7.1 0.00024 32.5 7.2 66 19-102 120-189 (351)
323 1ydo_A HMG-COA lyase; TIM-barr 77.0 2.2 7.5E-05 35.0 3.9 65 22-99 163-230 (307)
324 1vhc_A Putative KHG/KDPG aldol 76.9 20 0.00069 27.9 9.4 82 18-127 78-160 (224)
325 2z6i_A Trans-2-enoyl-ACP reduc 76.9 14 0.00048 30.0 8.8 82 20-127 79-165 (332)
326 1oy0_A Ketopantoate hydroxymet 76.8 18 0.00062 29.7 9.4 82 26-122 123-213 (281)
327 1rqb_A Transcarboxylase 5S sub 76.6 2.5 8.6E-05 37.8 4.5 67 20-99 179-249 (539)
328 3ovp_A Ribulose-phosphate 3-ep 76.5 25 0.00085 27.3 10.1 72 20-106 21-98 (228)
329 1tv5_A Dhodehase, dihydroorota 76.4 4.1 0.00014 35.4 5.7 67 22-102 317-402 (443)
330 3l5a_A NADH/flavin oxidoreduct 76.4 7.2 0.00024 33.4 7.1 103 20-128 174-322 (419)
331 1zlp_A PSR132, petal death pro 76.1 33 0.0011 28.5 12.2 100 20-130 120-231 (318)
332 1gte_A Dihydropyrimidine dehyd 76.1 4.8 0.00016 37.8 6.4 70 20-103 719-817 (1025)
333 1ujp_A Tryptophan synthase alp 76.1 8.7 0.0003 30.9 7.2 66 19-102 157-229 (271)
334 2gjl_A Hypothetical protein PA 75.7 29 0.00098 27.9 10.3 76 20-120 87-169 (328)
335 3ngj_A Deoxyribose-phosphate a 75.7 2.2 7.5E-05 34.5 3.5 74 9-97 146-224 (239)
336 3civ_A Endo-beta-1,4-mannanase 75.7 33 0.0011 28.3 12.4 110 20-130 57-203 (343)
337 1z41_A YQJM, probable NADH-dep 75.6 9.9 0.00034 31.1 7.6 69 20-102 233-307 (338)
338 2v5j_A 2,4-dihydroxyhept-2-ENE 75.3 15 0.00053 29.6 8.6 91 12-123 43-134 (287)
339 3hgj_A Chromate reductase; TIM 74.8 16 0.00053 30.1 8.6 95 22-133 245-349 (349)
340 3eeg_A 2-isopropylmalate synth 74.6 3.5 0.00012 34.1 4.6 67 20-99 155-227 (325)
341 1s2w_A Phosphoenolpyruvate pho 74.6 8.9 0.00031 31.5 7.0 65 19-103 173-239 (295)
342 3ivs_A Homocitrate synthase, m 74.4 3.1 0.00011 36.0 4.4 65 22-99 186-252 (423)
343 2qf7_A Pyruvate carboxylase pr 74.3 30 0.001 33.3 11.5 103 20-131 649-759 (1165)
344 1izc_A Macrophomate synthase i 74.1 9.7 0.00033 31.8 7.2 88 15-123 49-140 (339)
345 1bf6_A Phosphotriesterase homo 74.1 23 0.00078 26.8 8.9 105 19-131 36-158 (291)
346 2ze3_A DFA0005; organic waste 74.0 16 0.00056 29.6 8.4 96 20-123 96-204 (275)
347 1yad_A Regulatory protein TENI 73.9 3.2 0.00011 31.4 3.9 64 18-103 31-96 (221)
348 2ftp_A Hydroxymethylglutaryl-C 73.7 2.6 8.8E-05 34.1 3.5 90 18-120 157-262 (302)
349 2qf7_A Pyruvate carboxylase pr 73.6 3.5 0.00012 39.8 4.9 67 20-99 713-781 (1165)
350 2yzr_A Pyridoxal biosynthesis 73.5 3 0.0001 35.3 3.9 44 48-103 229-272 (330)
351 3jr2_A Hexulose-6-phosphate sy 72.9 17 0.0006 27.5 7.9 77 8-103 5-91 (218)
352 1vcf_A Isopentenyl-diphosphate 72.8 23 0.0008 28.6 9.1 71 18-101 133-211 (332)
353 1nvm_A HOA, 4-hydroxy-2-oxoval 72.2 39 0.0013 27.6 11.8 101 18-130 95-200 (345)
354 2dvt_A Thermophilic reversible 72.2 4.1 0.00014 31.8 4.3 48 84-131 109-165 (327)
355 3ewb_X 2-isopropylmalate synth 72.1 5.2 0.00018 32.5 5.0 88 20-120 154-250 (293)
356 1dxe_A 2-dehydro-3-deoxy-galac 72.0 16 0.00056 28.6 7.8 86 16-123 27-114 (256)
357 3fok_A Uncharacterized protein 71.7 4.7 0.00016 33.8 4.7 65 20-102 204-273 (307)
358 1ea0_A Glutamate synthase [NAD 71.6 7.9 0.00027 38.7 6.9 70 17-102 1005-1093(1479)
359 3ist_A Glutamate racemase; str 71.6 4.7 0.00016 32.4 4.6 44 19-68 57-100 (269)
360 1q6o_A Humps, 3-keto-L-gulonat 71.6 6.5 0.00022 29.8 5.2 84 19-121 119-210 (216)
361 1kwg_A Beta-galactosidase; TIM 71.5 2.2 7.4E-05 37.9 2.8 49 81-129 13-69 (645)
362 2r14_A Morphinone reductase; H 71.4 11 0.00038 31.6 7.0 66 22-102 261-328 (377)
363 1n7k_A Deoxyribose-phosphate a 71.1 7.1 0.00024 31.1 5.5 72 9-97 137-216 (234)
364 1vcv_A Probable deoxyribose-ph 71.1 3.2 0.00011 33.0 3.4 85 8-103 116-219 (226)
365 3r12_A Deoxyribose-phosphate a 71.0 7.4 0.00025 31.7 5.7 73 20-100 115-191 (260)
366 2f6k_A Metal-dependent hydrola 70.9 3.1 0.00011 32.2 3.3 50 83-132 104-156 (307)
367 3oix_A Putative dihydroorotate 70.6 8.3 0.00029 32.2 6.0 78 10-100 131-222 (345)
368 1nu0_A Hypothetical protein YQ 70.6 12 0.00042 27.3 6.3 40 90-130 48-94 (138)
369 1fcq_A Hyaluronoglucosaminidas 70.5 2.1 7.3E-05 36.6 2.4 57 59-121 259-319 (350)
370 3gmi_A UPF0348 protein MJ0951; 70.5 14 0.00046 31.3 7.4 55 57-120 111-165 (357)
371 2xsa_A Ogoga, hyaluronoglucosa 70.4 15 0.00052 32.2 7.8 47 57-107 69-116 (447)
372 2czd_A Orotidine 5'-phosphate 70.1 17 0.00056 27.4 7.2 76 22-121 125-204 (208)
373 4a29_A Engineered retro-aldol 70.1 41 0.0014 27.4 9.9 94 7-120 153-248 (258)
374 3gip_A N-acyl-D-glutamate deac 70.0 9.5 0.00033 32.1 6.3 55 77-131 162-219 (480)
375 2wm1_A 2-amino-3-carboxymucona 69.5 3.4 0.00012 32.8 3.3 49 84-132 125-176 (336)
376 3ixl_A Amdase, arylmalonate de 69.4 6 0.0002 31.0 4.7 79 22-111 109-195 (240)
377 1ofd_A Ferredoxin-dependent gl 69.4 8.5 0.00029 38.6 6.6 70 17-102 1040-1128(1520)
378 2pe4_A Hyaluronidase-1; hyalur 69.1 2.1 7E-05 37.6 2.0 40 58-101 260-301 (424)
379 3l5l_A Xenobiotic reductase A; 68.6 24 0.00082 29.2 8.4 67 22-102 252-325 (363)
380 2ffi_A 2-pyrone-4,6-dicarboxyl 68.5 2.6 8.8E-05 32.5 2.3 101 17-132 40-145 (288)
381 2gl5_A Putative dehydratase pr 68.4 49 0.0017 27.3 10.7 97 20-128 156-273 (410)
382 3oa3_A Aldolase; structural ge 67.6 13 0.00043 30.8 6.4 95 20-121 130-230 (288)
383 2uv8_G Fatty acid synthase sub 67.5 1.4 4.8E-05 45.2 0.7 88 20-121 714-824 (2051)
384 2cu0_A Inosine-5'-monophosphat 67.5 5.8 0.0002 34.1 4.5 70 17-104 277-359 (486)
385 1s2w_A Phosphoenolpyruvate pho 67.4 50 0.0017 26.9 10.0 103 20-130 98-215 (295)
386 3fa4_A 2,3-dimethylmalate lyas 67.2 52 0.0018 27.1 10.5 102 20-131 99-214 (302)
387 1p4c_A L(+)-mandelate dehydrog 67.0 16 0.00056 30.5 7.1 62 47-123 213-278 (380)
388 2a4a_A Deoxyribose-phosphate a 67.0 2.9 9.8E-05 34.5 2.4 88 9-103 160-265 (281)
389 3nur_A Amidohydrolase; TIM bar 66.8 5 0.00017 33.2 3.9 52 82-133 141-195 (357)
390 2p10_A MLL9387 protein; putati 66.8 54 0.0018 27.1 10.5 106 7-124 26-161 (286)
391 3bo9_A Putative nitroalkan dio 66.8 50 0.0017 26.7 11.2 83 19-127 92-179 (326)
392 2qt3_A N-isopropylammelide iso 66.7 43 0.0015 26.4 9.3 102 22-132 111-219 (403)
393 4eiv_A Deoxyribose-phosphate a 66.6 13 0.00043 31.1 6.2 102 8-122 153-283 (297)
394 3irs_A Uncharacterized protein 66.2 34 0.0012 26.8 8.5 105 17-132 47-159 (291)
395 3ls9_A Triazine hydrolase; atr 65.8 49 0.0017 26.5 9.6 113 21-133 114-241 (456)
396 3k2g_A Resiniferatoxin-binding 65.4 39 0.0013 28.1 9.1 44 18-64 88-131 (364)
397 2hsa_B 12-oxophytodienoate red 64.9 24 0.00083 29.8 7.8 66 22-102 266-348 (402)
398 3aty_A Tcoye, prostaglandin F2 64.7 15 0.00051 30.9 6.5 82 20-103 178-287 (379)
399 3vav_A 3-methyl-2-oxobutanoate 64.7 57 0.0019 26.7 12.1 108 9-132 29-150 (275)
400 3iv3_A Tagatose 1,6-diphosphat 64.4 19 0.00064 30.3 7.0 68 26-103 200-281 (332)
401 1b73_A Glutamate racemase; iso 64.3 19 0.00066 28.0 6.7 61 40-107 9-74 (254)
402 4e38_A Keto-hydroxyglutarate-a 64.2 47 0.0016 26.3 9.0 79 16-122 93-172 (232)
403 3k30_A Histamine dehydrogenase 64.0 13 0.00045 32.9 6.3 77 20-102 160-263 (690)
404 2qgy_A Enolase from the enviro 63.9 60 0.0021 26.7 10.9 92 20-128 155-249 (391)
405 3s81_A Putative aspartate race 63.9 23 0.00078 28.3 7.2 76 42-128 33-126 (268)
406 3oix_A Putative dihydroorotate 63.8 3.5 0.00012 34.5 2.4 70 19-102 207-304 (345)
407 2nql_A AGR_PAT_674P, isomerase 62.8 63 0.0022 26.5 10.4 93 20-128 170-263 (388)
408 3eoo_A Methylisocitrate lyase; 62.6 40 0.0014 27.7 8.5 66 20-103 175-240 (298)
409 1sgj_A Citrate lyase, beta sub 62.4 14 0.00048 29.4 5.7 100 9-122 9-118 (284)
410 2cho_A Glucosaminidase, hexosa 62.4 18 0.00063 33.2 7.0 55 47-103 184-241 (716)
411 3cu2_A Ribulose-5-phosphate 3- 62.3 4.9 0.00017 31.9 2.9 93 10-120 129-234 (237)
412 2rjg_A Alanine racemase; alpha 62.2 14 0.00047 30.5 5.7 115 11-126 72-206 (379)
413 3rhg_A Putative phophotriester 62.1 59 0.002 27.0 9.6 107 18-131 77-200 (365)
414 1tz9_A Mannonate dehydratase; 62.0 31 0.0011 27.9 7.8 82 20-101 25-114 (367)
415 2pgw_A Muconate cycloisomerase 62.0 64 0.0022 26.4 10.6 91 20-128 153-245 (384)
416 3out_A Glutamate racemase; str 61.2 7 0.00024 31.3 3.6 43 20-68 60-103 (268)
417 3fkr_A L-2-keto-3-deoxyarabona 61.1 34 0.0012 27.7 7.8 93 19-123 93-189 (309)
418 2ztj_A Homocitrate synthase; ( 61.0 72 0.0025 26.6 11.4 104 18-130 76-195 (382)
419 3lye_A Oxaloacetate acetyl hyd 60.8 32 0.0011 28.4 7.7 65 20-102 182-247 (307)
420 3vk5_A MOEO5; TIM barrel, tran 60.5 51 0.0017 27.2 8.8 70 48-130 28-102 (286)
421 2hjp_A Phosphonopyruvate hydro 60.5 66 0.0022 26.2 9.5 86 8-101 14-109 (290)
422 4dbe_A Orotidine 5'-phosphate 60.5 8.6 0.00029 30.1 4.0 61 19-102 125-187 (222)
423 1nsj_A PRAI, phosphoribosyl an 60.4 15 0.00052 28.3 5.4 38 86-124 13-52 (205)
424 3txv_A Probable tagatose 6-pho 59.6 91 0.0031 27.3 12.2 113 11-124 23-161 (450)
425 3t12_B Gliding protein MGLB; G 59.5 25 0.00084 25.7 6.1 61 72-132 1-86 (136)
426 4inf_A Metal-dependent hydrola 59.5 7.9 0.00027 32.3 3.8 52 82-133 159-213 (373)
427 3gka_A N-ethylmaleimide reduct 59.4 19 0.00066 30.1 6.2 60 22-102 256-316 (361)
428 3ixl_A Amdase, arylmalonate de 59.2 6.8 0.00023 30.7 3.2 64 60-128 31-102 (240)
429 1o66_A 3-methyl-2-oxobutanoate 59.1 73 0.0025 26.0 11.1 109 9-130 17-137 (275)
430 2qkf_A 3-deoxy-D-manno-octulos 59.0 24 0.00084 28.5 6.6 94 26-123 153-265 (280)
431 1zuw_A Glutamate racemase 1; ( 58.9 19 0.00064 28.6 5.8 23 81-103 163-185 (272)
432 1v5x_A PRA isomerase, phosphor 58.8 17 0.00058 28.0 5.4 38 86-124 12-51 (203)
433 1rcq_A Catabolic alanine racem 58.8 14 0.00048 29.9 5.1 120 11-131 52-190 (357)
434 2qq6_A Mandelate racemase/muco 58.7 77 0.0026 26.2 11.3 97 20-128 155-265 (410)
435 3ovg_A Amidohydrolase; structu 58.6 55 0.0019 27.3 8.9 108 19-131 52-189 (363)
436 3ojc_A Putative aspartate/glut 58.6 5.1 0.00017 31.2 2.3 65 42-107 9-88 (231)
437 4ab4_A Xenobiotic reductase B; 58.4 21 0.00071 29.9 6.2 60 22-102 248-308 (362)
438 1o60_A 2-dehydro-3-deoxyphosph 58.2 22 0.00075 29.0 6.2 102 18-123 144-268 (292)
439 3gnh_A L-lysine, L-arginine ca 58.1 26 0.00089 27.6 6.5 51 81-131 166-227 (403)
440 2ehh_A DHDPS, dihydrodipicolin 57.9 60 0.0021 25.9 8.7 90 19-123 85-178 (294)
441 3d3a_A Beta-galactosidase; pro 57.9 1.4 5E-05 39.8 -1.1 60 70-129 25-94 (612)
442 3aty_A Tcoye, prostaglandin F2 57.8 39 0.0013 28.3 7.9 63 22-102 272-336 (379)
443 3dxi_A Putative aldolase; TIM 57.7 8.2 0.00028 32.0 3.5 82 27-121 154-240 (320)
444 1hg3_A Triosephosphate isomera 57.7 15 0.0005 29.0 4.9 75 43-127 43-120 (225)
445 1rh9_A Endo-beta-mannanase; en 57.7 11 0.00039 30.1 4.3 49 81-129 41-103 (373)
446 1n8f_A DAHP synthetase; (beta/ 57.6 11 0.00037 32.1 4.3 92 26-121 222-340 (350)
447 1icp_A OPR1, 12-oxophytodienoa 57.3 16 0.00055 30.5 5.4 66 21-102 261-330 (376)
448 4f0h_A Ribulose bisphosphate c 57.3 10 0.00035 33.6 4.3 100 21-136 197-308 (493)
449 1iv0_A Hypothetical protein; r 57.2 8.8 0.0003 26.5 3.1 40 89-130 45-91 (98)
450 1p1x_A Deoxyribose-phosphate a 57.1 8.6 0.00029 31.2 3.5 72 9-85 138-217 (260)
451 4fhd_A Spore photoproduct lyas 56.4 15 0.00052 31.2 5.1 60 58-123 252-314 (368)
452 2ox1_A 3-dehydroquinate dehydr 56.3 45 0.0015 25.4 7.4 75 11-101 2-78 (196)
453 3h4u_A Amidohydrolase; signatu 56.2 80 0.0027 25.6 9.7 109 22-132 139-261 (479)
454 3b8i_A PA4872 oxaloacetate dec 56.1 69 0.0023 26.1 8.9 85 8-101 20-116 (287)
455 3tha_A Tryptophan synthase alp 56.0 5.2 0.00018 32.3 2.0 74 22-105 34-126 (252)
456 3tb6_A Arabinose metabolism tr 55.9 25 0.00086 26.2 5.8 45 83-129 59-104 (298)
457 4dzi_A Putative TIM-barrel met 55.9 8.1 0.00028 32.9 3.3 53 80-132 173-232 (423)
458 3tha_A Tryptophan synthase alp 55.8 29 0.00098 27.9 6.4 68 19-102 154-227 (252)
459 2gwg_A 4-oxalomesaconate hydra 55.6 9.9 0.00034 30.4 3.6 47 86-132 126-180 (350)
460 1a0c_A Xylose isomerase; ketol 55.5 20 0.00069 30.7 5.7 77 25-101 89-186 (438)
461 1m5w_A Pyridoxal phosphate bio 55.2 7.9 0.00027 31.5 3.0 21 17-37 136-156 (243)
462 1wbh_A KHG/KDPG aldolase; lyas 55.1 31 0.0011 26.5 6.3 63 21-103 33-96 (214)
463 3lab_A Putative KDPG (2-keto-3 54.9 57 0.0019 25.7 7.9 79 16-122 72-157 (217)
464 3q94_A Fructose-bisphosphate a 54.9 86 0.003 25.6 10.4 103 17-132 91-214 (288)
465 3nvt_A 3-deoxy-D-arabino-heptu 54.9 33 0.0011 29.2 6.9 98 18-123 261-375 (385)
466 3pm6_A Putative fructose-bisph 54.8 14 0.00047 30.9 4.5 42 91-132 180-229 (306)
467 3a24_A Alpha-galactosidase; gl 54.7 9.1 0.00031 35.0 3.6 100 25-133 318-427 (641)
468 3dx5_A Uncharacterized protein 54.7 41 0.0014 25.3 6.9 66 21-88 89-162 (286)
469 3pao_A Adenosine deaminase; st 54.3 9.8 0.00034 31.3 3.5 101 21-132 83-198 (326)
470 1ht6_A AMY1, alpha-amylase iso 54.2 18 0.00061 29.9 5.1 56 80-135 19-93 (405)
471 1m3u_A 3-methyl-2-oxobutanoate 54.2 86 0.0029 25.4 10.7 109 9-130 17-136 (264)
472 3r12_A Deoxyribose-phosphate a 54.0 12 0.00042 30.5 3.9 74 9-97 162-240 (260)
473 1rk6_A D-aminoacylase; TIM bar 53.9 22 0.00076 29.7 5.7 56 77-132 177-235 (496)
474 2eq5_A 228AA long hypothetical 53.9 21 0.00072 26.8 5.1 25 82-106 62-86 (228)
475 2yxg_A DHDPS, dihydrodipicolin 53.9 52 0.0018 26.2 7.7 89 19-122 85-177 (289)
476 3feq_A Putative amidohydrolase 53.6 34 0.0012 27.1 6.5 52 81-132 171-233 (423)
477 3na8_A Putative dihydrodipicol 52.8 15 0.0005 30.1 4.3 80 43-130 13-99 (315)
478 2xed_A Putative maleate isomer 52.5 10 0.00035 30.2 3.2 60 59-122 54-121 (273)
479 3e61_A Putative transcriptiona 52.3 18 0.00061 26.9 4.4 48 74-129 43-91 (277)
480 3o6c_A PNP synthase, pyridoxin 52.1 9.5 0.00032 31.4 3.0 21 17-37 133-153 (260)
481 3rot_A ABC sugar transporter, 51.7 27 0.00091 26.5 5.4 49 82-134 48-97 (297)
482 1p1x_A Deoxyribose-phosphate a 51.3 20 0.00068 29.0 4.8 75 20-101 89-169 (260)
483 2ocz_A 3-dehydroquinate dehydr 51.3 48 0.0016 25.8 6.9 83 14-102 10-99 (231)
484 3l6u_A ABC-type sugar transpor 51.2 28 0.00097 26.0 5.4 43 83-129 52-94 (293)
485 1jfl_A Aspartate racemase; alp 51.1 11 0.00037 28.7 3.1 63 42-105 8-84 (228)
486 3ij6_A Uncharacterized metal-d 51.1 8.8 0.0003 30.8 2.6 53 82-134 110-165 (312)
487 3gk0_A PNP synthase, pyridoxin 51.1 9 0.00031 31.8 2.7 21 17-37 164-184 (278)
488 1hg3_A Triosephosphate isomera 50.6 29 0.00098 27.3 5.5 80 11-102 119-205 (225)
489 1gvf_A Tagatose-bisphosphate a 50.5 29 0.00099 28.4 5.7 103 17-132 85-210 (286)
490 2rdx_A Mandelate racemase/muco 50.4 79 0.0027 25.8 8.4 89 20-128 151-241 (379)
491 3exr_A RMPD (hexulose-6-phosph 50.4 13 0.00044 28.7 3.4 68 18-102 123-196 (221)
492 3hm7_A Allantoinase; metallo-d 50.2 1E+02 0.0034 25.0 9.4 97 21-131 82-189 (448)
493 2hmc_A AGR_L_411P, dihydrodipi 50.2 43 0.0015 27.7 6.8 64 19-84 108-174 (344)
494 3iar_A Adenosine deaminase; pu 50.1 39 0.0013 28.2 6.6 103 22-132 84-213 (367)
495 2o56_A Putative mandelate race 49.8 1.1E+02 0.0037 25.2 12.1 97 20-128 158-270 (407)
496 2zsk_A PH1733, 226AA long hypo 49.8 59 0.002 24.5 7.1 71 25-103 110-193 (226)
497 2dgd_A 223AA long hypothetical 49.6 18 0.00063 27.2 4.1 80 20-110 97-185 (223)
498 3m47_A Orotidine 5'-phosphate 49.5 76 0.0026 24.5 7.8 84 21-123 83-172 (228)
499 3iwp_A Copper homeostasis prot 48.9 1.1E+02 0.0038 25.1 10.2 89 20-124 115-208 (287)
500 1fob_A Beta-1,4-galactanase; B 48.4 19 0.00063 29.4 4.2 53 86-139 31-89 (334)
No 1
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=100.00 E-value=8.7e-62 Score=395.83 Aligned_cols=132 Identities=33% Similarity=0.509 Sum_probs=129.3
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHH---hhCCCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIK---RLVLVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~---~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
+++|||++|+++|.+|+++||||||||++|++||||||+|++++++ +.++|||+||||| |+|||+||++|+++|++
T Consensus 2 ~llEvc~~s~~~a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRP-R~GdF~Ys~~E~~~M~~ 80 (224)
T 2bdq_A 2 ILREFCAENLTDLTRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRP-RGGNFVYNDLELRIMEE 80 (224)
T ss_dssp CEEEEEEETTTTGGGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCS-SSSCSCCCHHHHHHHHH
T ss_pred ceEEEEECCHHHHHHHHHcCCCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECC-CCCCCcCCHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999 8999999999999 99999999999999999
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEeecccCC--CCcccc
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHRAFDVV--REPNEK 142 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHRAFD~~--~d~~~~ 142 (146)
||+.++++|+||||||+||+||+||.+++++|+++|+|+++|||||||.+ +||.++
T Consensus 81 Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~a 138 (224)
T 2bdq_A 81 DILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKS 138 (224)
T ss_dssp HHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHH
T ss_pred HHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999 998874
No 2
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=100.00 E-value=4e-61 Score=398.29 Aligned_cols=132 Identities=39% Similarity=0.645 Sum_probs=129.8
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
++||||++|+++|.+|+++||||||||++|++||||||+|+++.+++.++|||+||||| |+|||+||++|+++|++||+
T Consensus 2 ~~lEvc~~s~~~a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRP-R~GdF~Ys~~E~~~M~~Di~ 80 (256)
T 1twd_A 2 ALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRP-RGGDFCYSDGEFAAILEDVR 80 (256)
T ss_dssp CEEEEEESSHHHHHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCS-SSSCSCCCHHHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECC-CCCCCcCCHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEeecccCCCCcccc
Q psy7930 90 QFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHRAFDVVREPNEK 142 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHRAFD~~~d~~~~ 142 (146)
.++++|+||||||+||+||+||.+++++|+++|+|+++|||||||+++||.++
T Consensus 81 ~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~a 133 (256)
T 1twd_A 81 TVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYT 133 (256)
T ss_dssp HHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHH
T ss_pred HHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999874
No 3
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.7e-56 Score=375.54 Aligned_cols=136 Identities=51% Similarity=0.789 Sum_probs=131.8
Q ss_pred ccccceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 6 LWNKTTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 6 ~~~~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
++++++||||++|++++.+|+++||||||||++|.+||||||+++++.+++.++|||+||||| |+|||+||++|+++|+
T Consensus 36 ~~~~~~lEvc~~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRP-RgGdF~Ys~~E~~~M~ 114 (287)
T 3iwp_A 36 AANGFLMEVCVDSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRP-RGGDFLYSDREIEVMK 114 (287)
T ss_dssp --CCSEEEEEESSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCS-SSSCSCCCHHHHHHHH
T ss_pred CCCCceEEEEeCCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEec-CCCCcccCHHHHHHHH
Confidence 477899999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEeecccCCCCcccc
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHRAFDVVREPNEK 142 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHRAFD~~~d~~~~ 142 (146)
+||+.++++||||||||+||+||+||.+++++|+++|+++++|||||||+++||.++
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~A 171 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAA 171 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHH
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999763
No 4
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.69 E-value=2.5e-08 Score=79.89 Aligned_cols=100 Identities=17% Similarity=0.150 Sum_probs=74.3
Q ss_pred HHHHHHHHHcCCCEEEecCCCC-----------------CCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHH
Q psy7930 19 VASALAAVRGGADRLELCAALS-----------------EGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQA 79 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~-----------------~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~ 79 (146)
.+.+..++++|||.|||+..++ .+|+||+ +.+++++++..++|+++|.++ . ..|.|.-
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~-~-~~~~~~~- 111 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYY-K-PIMFRSL- 111 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCS-H-HHHSCCT-
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecC-c-HHHHHHH-
Confidence 4567888899999999997665 6889998 678999999889999999765 2 1233332
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeecccCC
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAFDVV 136 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAFD~~ 136 (146)
+.+++.|+||+++. |..++ ...++++.++ +++.++|.+.+..
T Consensus 112 ---------~~a~~aGadgv~v~----d~~~~--~~~~~~~~~~~~g~~~i~~~a~~t~ 155 (262)
T 1rd5_A 112 ---------AKMKEAGVHGLIVP----DLPYV--AAHSLWSEAKNNNLELVLLTTPAIP 155 (262)
T ss_dssp ---------HHHHHTTCCEEECT----TCBTT--THHHHHHHHHHTTCEECEEECTTSC
T ss_pred ---------HHHHHcCCCEEEEc----CCChh--hHHHHHHHHHHcCCceEEEECCCCC
Confidence 22899999999985 33332 3566766654 7889999987643
No 5
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=98.35 E-value=5e-07 Score=71.12 Aligned_cols=78 Identities=18% Similarity=0.172 Sum_probs=58.9
Q ss_pred HHHHHHHHcCCCEEEec---CC-CCCCCC-------------CC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHH
Q psy7930 20 ASALAAVRGGADRLELC---AA-LSEGGL-------------TP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc---~~-l~~GGl-------------TP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
+.+...+++ ||+|||+ +. ..-|.+ +. +..+++++++.+++||++|+.. +. .|.|.
T Consensus 23 ~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~-~~-~~~~~--- 96 (248)
T 1geq_A 23 NFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYY-NP-IYRAG--- 96 (248)
T ss_dssp HHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECH-HH-HHHHC---
T ss_pred HHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEecc-ch-hhhcC---
Confidence 456777788 9999999 32 222333 33 3789999999889999999854 22 36666
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeecC
Q psy7930 81 KEIMALDCHQFVESGADGFVIGALTG 106 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~L~~ 106 (146)
+.++++.+.++|+||+++|.+..
T Consensus 97 ---~~~~~~~~~~~Gad~v~~~~~~~ 119 (248)
T 1geq_A 97 ---VRNFLAEAKASGVDGILVVDLPV 119 (248)
T ss_dssp ---HHHHHHHHHHHTCCEEEETTCCG
T ss_pred ---HHHHHHHHHHCCCCEEEECCCCh
Confidence 56789999999999999997654
No 6
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=97.41 E-value=0.00041 Score=56.13 Aligned_cols=88 Identities=24% Similarity=0.279 Sum_probs=63.4
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCC------CHHHHHHHHhhCCCcEEEE--Ec-cCCCCCcccCHHHHH
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSEGGLTP------TLGLYRVIKRLVLVPVFVM--IR-VRAGFDFVFSQAEKE 82 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTP------S~g~i~~~~~~~~ipv~vM--IR-P~R~gdF~Ys~~E~~ 82 (146)
+=+++.+.+.+..+.+.|++-| +..||.|+ +...++.+++..++||.+. |+ |
T Consensus 130 i~~~~~~~~~a~~~~~~gad~v-----~~~~~~~Gt~~~~~~~~~l~~i~~~~~iPviv~gGI~t~-------------- 190 (264)
T 1xm3_A 130 LPYTSDDVVLARKLEELGVHAI-----MPGASPIGSGQGILNPLNLSFIIEQAKVPVIVDAGIGSP-------------- 190 (264)
T ss_dssp EEEECSCHHHHHHHHHHTCSCB-----EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEEESCCCSH--------------
T ss_pred EEEcCCCHHHHHHHHHhCCCEE-----EECCcccCCCCCCCCHHHHHHHHhcCCCCEEEEeCCCCH--------------
Confidence 3367889999999999999998 22344433 3678999999889999887 54 5
Q ss_pred HHHHHHHHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHHHh
Q psy7930 83 IMALDCHQFVESGADGFVIG-ALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~~a 122 (146)
+|+..+.++|||||++| ++..... -.+.+++|+++.
T Consensus 191 ---eda~~~~~~GAdgViVGSAi~~a~d-p~~~~~~l~~~v 227 (264)
T 1xm3_A 191 ---KDAAYAMELGADGVLLNTAVSGADD-PVKMARAMKLAV 227 (264)
T ss_dssp ---HHHHHHHHTTCSEEEESHHHHTSSS-HHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCEEEEcHHHhCCCC-HHHHHHHHHHHH
Confidence 67888999999999999 4443211 134566665443
No 7
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=97.34 E-value=0.00079 Score=53.07 Aligned_cols=93 Identities=14% Similarity=0.080 Sum_probs=62.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSE-GGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~-GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+..+-+..++++||+.|++-+--.. .|..+....++.+++..++||.++ | |..+. .|+..+++.|
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~------g-gi~~~-------~~i~~~~~~G 96 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS------G-GAGKM-------EHFLEAFLAG 96 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEE------S-CCCST-------HHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEE------C-CCCCH-------HHHHHHHHcC
Confidence 3456678889999999999652222 355578999999999999998763 2 33333 3466677789
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
|||+++|-..-++.+|.+.++++++..+
T Consensus 97 ad~v~lg~~~~~~~~~~~~~~~~~~~~g 124 (266)
T 2w6r_A 97 ADKALAASVFHFREIDMRELKEYLKKHG 124 (266)
T ss_dssp CSEEECCCCC------CHHHHHHCC---
T ss_pred CcHhhhhHHHHhCCCCHHHHHHHHHHcC
Confidence 9999999876656678888888776655
No 8
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.10 E-value=0.0016 Score=52.57 Aligned_cols=84 Identities=21% Similarity=0.230 Sum_probs=64.8
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
.+-|...+++||+.|-+... .+-...+...++.+++.+++||. |. ||..++. ++..++++|||+
T Consensus 68 ~~~A~~~~~~GA~~isvlt~--~~~f~G~~~~l~~i~~~v~lPvl---~k----dfI~d~~-------qi~~a~~~GAD~ 131 (254)
T 1vc4_A 68 VEAALAYARGGARAVSVLTE--PHRFGGSLLDLKRVREAVDLPLL---RK----DFVVDPF-------MLEEARAFGASA 131 (254)
T ss_dssp HHHHHHHHHTTCSEEEEECC--CSSSCCCHHHHHHHHHHCCSCEE---EE----SCCCSHH-------HHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEecc--hhhhccCHHHHHHHHHhcCCCEE---EC----CcCCCHH-------HHHHHHHcCCCE
Confidence 45588899999999998642 22233489999999999999973 43 6998876 467789999999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
|.+|.-. ++ +.+++|++.++
T Consensus 132 VlL~~~~----l~-~~l~~l~~~a~ 151 (254)
T 1vc4_A 132 ALLIVAL----LG-ELTGAYLEEAR 151 (254)
T ss_dssp EEEEHHH----HG-GGHHHHHHHHH
T ss_pred EEECccc----hH-HHHHHHHHHHH
Confidence 9999753 34 67888888776
No 9
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=96.99 E-value=0.0013 Score=53.12 Aligned_cols=79 Identities=19% Similarity=0.326 Sum_probs=56.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCC-----------------CCCCCCC--HHHHHHHHhh-CCCcEEEEEccCCCCCcccCH
Q psy7930 19 VASALAAVRGGADRLELCAALS-----------------EGGLTPT--LGLYRVIKRL-VLVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~-----------------~GGlTPS--~g~i~~~~~~-~~ipv~vMIRP~R~gdF~Ys~ 78 (146)
.+.+...+++|||-|||---++ .+|+|.+ ..+++++++. .++||++|+.- . .-|.|.-
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~-n-~v~~~g~ 111 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYA-N-LVFNNGI 111 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECH-H-HHHTTCH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcc-c-HHHHhhH
Confidence 3457777889999999965332 3455554 3679999988 79999999632 1 1233443
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeec
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALT 105 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~ 105 (146)
.+.++.+.+.|+||+++.-+.
T Consensus 112 ------~~~~~~~~~aGadgii~~d~~ 132 (268)
T 1qop_A 112 ------DAFYARCEQVGVDSVLVADVP 132 (268)
T ss_dssp ------HHHHHHHHHHTCCEEEETTCC
T ss_pred ------HHHHHHHHHcCCCEEEEcCCC
Confidence 467888999999999997555
No 10
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.91 E-value=0.0032 Score=50.14 Aligned_cols=69 Identities=22% Similarity=0.250 Sum_probs=53.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCC--cccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFD--FVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gd--F~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+=|.+++++||.=|+. .|...++++++.+++||.-++|- -+++ |.-++. .++++.++++|||
T Consensus 40 ~~A~a~~~~Ga~~i~~----------~~~~~i~~ir~~v~~Pvig~~k~-~~~~~~~~I~~~-----~~~i~~~~~aGad 103 (229)
T 3q58_A 40 AMAQAAASAGAVAVRI----------EGIENLRTVRPHLSVPIIGIIKR-DLTGSPVRITPY-----LQDVDALAQAGAD 103 (229)
T ss_dssp HHHHHHHHTTCSEEEE----------ESHHHHHHHGGGCCSCEEEECBC-CCSSCCCCBSCS-----HHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCcEEEE----------CCHHHHHHHHHhcCCCEEEEEee-cCCCCceEeCcc-----HHHHHHHHHcCCC
Confidence 4577889999999985 36889999999999999887776 5555 433331 2467788999999
Q ss_pred EEEEeee
Q psy7930 98 GFVIGAL 104 (146)
Q Consensus 98 G~VfG~L 104 (146)
.|++++-
T Consensus 104 ~I~l~~~ 110 (229)
T 3q58_A 104 IIAFDAS 110 (229)
T ss_dssp EEEEECC
T ss_pred EEEECcc
Confidence 9998873
No 11
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.87 E-value=0.0076 Score=47.92 Aligned_cols=93 Identities=12% Similarity=0.131 Sum_probs=63.0
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEec-CCCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELC-AALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc-~~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
+.+=+.+.|.+.+..|++.|||-|=.. .++..++ ..|.+.+++++++. ++||.. -|| . .|. +
T Consensus 130 ~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~-~ipvIA-----~GG-I-~t~-------~ 194 (229)
T 3q58_A 130 LLAMADCSTVNEGISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA-GCRVIA-----EGR-Y-NTP-------A 194 (229)
T ss_dssp CEEEEECSSHHHHHHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT-TCCEEE-----ESS-C-CSH-------H
T ss_pred CEEEEecCCHHHHHHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc-CCCEEE-----ECC-C-CCH-------H
Confidence 344467789999999999999999532 2232222 35788999999887 888754 244 2 122 5
Q ss_pred HHHHHHHcCCCEEEEee-ecCCCCcCHHHHHHHHHH
Q psy7930 87 DCHQFVESGADGFVIGA-LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~-L~~dg~iD~~~~~~Li~~ 121 (146)
|+..+.++|||||++|= |.. -...+++++++
T Consensus 195 d~~~~~~~GadgV~VGsai~~----p~~~~~~f~~~ 226 (229)
T 3q58_A 195 LAANAIEHGAWAVTVGSAITR----IEHICQWFSHA 226 (229)
T ss_dssp HHHHHHHTTCSEEEECHHHHC----HHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEchHhcC----hHHHHHHHHHH
Confidence 77778899999999992 221 23455555554
No 12
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=96.86 E-value=0.0069 Score=49.84 Aligned_cols=85 Identities=24% Similarity=0.261 Sum_probs=66.2
Q ss_pred HHHHHHHHcCCCEEEecCCC-CCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAAL-SEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+-|...+++||+.|-....- ..+| |...++.+++.+++||. |= ||..++. +|..++.+|||+
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~G---s~~~L~~ir~~v~lPVl---~K----dfi~d~~-------qi~ea~~~GAD~ 145 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQG---APEFLTAARQACSLPAL---RK----DFLFDPY-------QVYEARSWGADC 145 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCC---CHHHHHHHHHTSSSCEE---EE----SCCCSTH-------HHHHHHHTTCSE
T ss_pred HHHHHHHHCCCCEEEEeccccccCC---CHHHHHHHHHhcCCCEE---EC----CccCCHH-------HHHHHHHcCCCE
Confidence 45788889999999887632 2233 88899999999999984 32 5877766 377889999999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhCCC
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIGDR 125 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~~~ 125 (146)
|.+++- .++.+.+++|++.|+.+
T Consensus 146 VlLi~a----~L~~~~l~~l~~~a~~l 168 (272)
T 3tsm_A 146 ILIIMA----SVDDDLAKELEDTAFAL 168 (272)
T ss_dssp EEEETT----TSCHHHHHHHHHHHHHT
T ss_pred EEEccc----ccCHHHHHHHHHHHHHc
Confidence 999964 35778899999998743
No 13
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=96.86 E-value=0.0035 Score=50.44 Aligned_cols=91 Identities=23% Similarity=0.367 Sum_probs=60.8
Q ss_pred HHHHHHHHHcCCCEEEecCCCC-----------------CCCCCCC--HHHHHHHHhhC-CCcEEEEEccCCCCCcccCH
Q psy7930 19 VASALAAVRGGADRLELCAALS-----------------EGGLTPT--LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~-----------------~GGlTPS--~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~ 78 (146)
.+-+...+++|+|-|||---++ ..|+|.. ..+++++++.+ ++|+.+|--. ..-|.|.
T Consensus 34 ~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~--n~v~~~g- 110 (262)
T 2ekc_A 34 LKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYY--NPIFRIG- 110 (262)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCH--HHHHHHC-
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecC--cHHHHhh-
Confidence 3457777889999999965332 2455543 45688888888 9999988211 0012222
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
..+.++.+++.|+||+++.-| ..+...++++.++
T Consensus 111 -----~~~f~~~~~~aG~dgvii~dl------~~ee~~~~~~~~~ 144 (262)
T 2ekc_A 111 -----LEKFCRLSREKGIDGFIVPDL------PPEEAEELKAVMK 144 (262)
T ss_dssp -----HHHHHHHHHHTTCCEEECTTC------CHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHcCCCEEEECCC------CHHHHHHHHHHHH
Confidence 267788899999999988532 2355677777665
No 14
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=96.85 E-value=0.0056 Score=46.24 Aligned_cols=98 Identities=24% Similarity=0.361 Sum_probs=67.2
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCCC----CCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAALS----EGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~----~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
.+++-+.+.|.+++..+.+.|+|.|=+-.-.. .|+.+.+...++++++..++||.+. || -. .
T Consensus 108 ~~~~~v~~~t~~e~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~-----GG-I~--~------ 173 (215)
T 1xi3_A 108 NLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAI-----GG-IN--K------ 173 (215)
T ss_dssp TSEEEEEESSHHHHHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEE-----SS-CC--T------
T ss_pred CCEEEEecCCHHHHHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEE-----CC-cC--H------
Confidence 34566778999999999999999997632111 2234556788888888888998653 33 21 1
Q ss_pred HHHHHHHHHcCCCEEEEee-ecCCCCcCH-HHHHHHHHHhC
Q psy7930 85 ALDCHQFVESGADGFVIGA-LTGEQEIDI-EFIRQLKTIIG 123 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~-L~~dg~iD~-~~~~~Li~~a~ 123 (146)
+++..+.+.|++||++|- +.... |. +.++++++..+
T Consensus 174 -~nv~~~~~~Ga~gv~vgs~i~~~~--d~~~~~~~~~~~~~ 211 (215)
T 1xi3_A 174 -DNAREVLKTGVDGIAVISAVMGAE--DVRKATEELRKIVE 211 (215)
T ss_dssp -TTHHHHHTTTCSEEEESHHHHTSS--SHHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCEEEEhHHHhCCC--CHHHHHHHHHHHHh
Confidence 367778889999999994 32221 55 57778776653
No 15
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.85 E-value=0.0038 Score=49.73 Aligned_cols=69 Identities=23% Similarity=0.279 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCC--cccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFD--FVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gd--F~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+=|.+++++||.-|+. .|...++++++.+++||.-++|. ..|+ |.-++. .++++.++++|||
T Consensus 40 ~~A~a~~~~Ga~~i~~----------~~~~~i~~ir~~v~~Pvig~~k~-d~~~~~~~I~~~-----~~~i~~~~~~Gad 103 (232)
T 3igs_A 40 AMALAAEQAGAVAVRI----------EGIDNLRMTRSLVSVPIIGIIKR-DLDESPVRITPF-----LDDVDALAQAGAA 103 (232)
T ss_dssp HHHHHHHHTTCSEEEE----------ESHHHHHHHHTTCCSCEEEECBC-CCSSCCCCBSCS-----HHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCeEEEE----------CCHHHHHHHHHhcCCCEEEEEee-cCCCcceEeCcc-----HHHHHHHHHcCCC
Confidence 4577889999998885 36889999999999999666675 4454 433331 2467788999999
Q ss_pred EEEEeee
Q psy7930 98 GFVIGAL 104 (146)
Q Consensus 98 G~VfG~L 104 (146)
.|++++-
T Consensus 104 ~V~l~~~ 110 (232)
T 3igs_A 104 IIAVDGT 110 (232)
T ss_dssp EEEEECC
T ss_pred EEEECcc
Confidence 9999874
No 16
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=96.77 E-value=0.0076 Score=49.95 Aligned_cols=79 Identities=20% Similarity=0.120 Sum_probs=60.0
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
.+=+|++|+.-++..++.|++-|+=-..+--+|... .+.+++.+++..++||.+ - || .. ++ +|+.
T Consensus 138 Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~---e--GG-I~-TP-------sDAa 203 (265)
T 1wv2_A 138 VMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEAKVPVLV---D--AG-VG-TA-------SDAA 203 (265)
T ss_dssp EEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE---E--SC-CC-SH-------HHHH
T ss_pred EEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE---e--CC-CC-CH-------HHHH
Confidence 456899999999999999999997755543334222 488999999988999866 2 33 32 33 5677
Q ss_pred HHHHcCCCEEEEee
Q psy7930 90 QFVESGADGFVIGA 103 (146)
Q Consensus 90 ~~~~~GadG~VfG~ 103 (146)
.+.++|+|||++|=
T Consensus 204 ~AmeLGAdgVlVgS 217 (265)
T 1wv2_A 204 IAMELGCEAVLMNT 217 (265)
T ss_dssp HHHHHTCSEEEESH
T ss_pred HHHHcCCCEEEECh
Confidence 78899999999983
No 17
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=96.64 E-value=0.02 Score=46.22 Aligned_cols=100 Identities=21% Similarity=0.088 Sum_probs=69.5
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh---CCCcEEEEEccCCCCCcc--cCHHHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFV--FSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~--Ys~~E~~~M~~dI~~~~~~ 94 (146)
.++..|.++||+=|-+.-++..+...--+..++++++. .++|+.++..| +|.++. +|++++... .+.+.++
T Consensus 96 ~~ve~Ai~~Ga~~v~~~~nig~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~-~G~~~~~~~s~~~i~~a---~~~a~~~ 171 (263)
T 1w8s_A 96 CSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVESFP-RGGKVVNETAPEIVAYA---ARIALEL 171 (263)
T ss_dssp SCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECC-CSTTCCCTTCHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCCcCHHHHHHHHHHHHHHHHHcCCeEEEEeeC-CCCccccCCCHHHHHHH---HHHHHHc
Confidence 56788899999999998876643222223344444432 38999999999 887663 255555443 6778889
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
|||.+-+|. + .+.+.++++.+.+.-+|+.
T Consensus 172 GAD~vkt~~--~---~~~e~~~~~~~~~~~~pV~ 200 (263)
T 1w8s_A 172 GADAMKIKY--T---GDPKTFSWAVKVAGKVPVL 200 (263)
T ss_dssp TCSEEEEEC--C---SSHHHHHHHHHHTTTSCEE
T ss_pred CCCEEEEcC--C---CCHHHHHHHHHhCCCCeEE
Confidence 999999994 2 3788899988877333654
No 18
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.62 E-value=0.0082 Score=49.09 Aligned_cols=91 Identities=22% Similarity=0.168 Sum_probs=63.2
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
+.+.|.+++..|.+.|||.|=... -....+.|+...++.+.+.+ ++||.+- || ..|. +|++.+
T Consensus 167 vev~t~ee~~~A~~~Gad~IGv~~-r~l~~~~~dl~~~~~l~~~v~~~~pvVae-----gG--I~t~-------edv~~l 231 (272)
T 3qja_A 167 VEVHTEQEADRALKAGAKVIGVNA-RDLMTLDVDRDCFARIAPGLPSSVIRIAE-----SG--VRGT-------ADLLAY 231 (272)
T ss_dssp EEESSHHHHHHHHHHTCSEEEEES-BCTTTCCBCTTHHHHHGGGSCTTSEEEEE-----SC--CCSH-------HHHHHH
T ss_pred EEcCCHHHHHHHHHCCCCEEEECC-CcccccccCHHHHHHHHHhCcccCEEEEE-----CC--CCCH-------HHHHHH
Confidence 456899999999999999998874 23445567888888888876 5676542 34 1222 677888
Q ss_pred HHcCCCEEEEee-ecCCCCcC-HHHHHHHHHH
Q psy7930 92 VESGADGFVIGA-LTGEQEID-IEFIRQLKTI 121 (146)
Q Consensus 92 ~~~GadG~VfG~-L~~dg~iD-~~~~~~Li~~ 121 (146)
+++|+|||++|= |-... | ..++++|+++
T Consensus 232 ~~~GadgvlVGsal~~a~--dp~~~~~~l~~~ 261 (272)
T 3qja_A 232 AGAGADAVLVGEGLVTSG--DPRAAVADLVTA 261 (272)
T ss_dssp HHTTCSEEEECHHHHTCS--CHHHHHHHHHTT
T ss_pred HHcCCCEEEEcHHHhCCC--CHHHHHHHHHhh
Confidence 999999999993 22211 3 3456666654
No 19
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=96.58 E-value=0.0027 Score=52.02 Aligned_cols=79 Identities=18% Similarity=0.202 Sum_probs=53.6
Q ss_pred HHHHHHHHHcCCCEEEec---CCCCC--------------CCCCCC--HHHHHHHHhh-CCCcEEEEEccCCCCCcccCH
Q psy7930 19 VASALAAVRGGADRLELC---AALSE--------------GGLTPT--LGLYRVIKRL-VLVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc---~~l~~--------------GGlTPS--~g~i~~~~~~-~~ipv~vMIRP~R~gdF~Ys~ 78 (146)
.+.+...+++|||-|||- |+.-. .|+|.. +.+++++++. .++||++|.-- .. -|.|.-
T Consensus 35 ~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~-np-v~~~g~ 112 (267)
T 3vnd_A 35 LKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYA-NL-VFANGI 112 (267)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECH-HH-HHHHCH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecC-cH-HHHhhH
Confidence 456677788999999998 22211 344442 5778888877 79999999532 00 244443
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeec
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALT 105 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~ 105 (146)
.+=++.++++|+||+++.=|.
T Consensus 113 ------e~f~~~~~~aGvdgvii~Dlp 133 (267)
T 3vnd_A 113 ------DEFYTKAQAAGVDSVLIADVP 133 (267)
T ss_dssp ------HHHHHHHHHHTCCEEEETTSC
T ss_pred ------HHHHHHHHHcCCCEEEeCCCC
Confidence 445778889999999986444
No 20
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=96.58 E-value=0.023 Score=45.15 Aligned_cols=78 Identities=22% Similarity=0.197 Sum_probs=56.9
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEec-CCCCCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELC-AALSEG--GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc-~~l~~G--GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
+.+=+.+.|.+.+..|++.|||-|=.. .++..+ ...|.+.+++++++. ++||.. -|| . .|. +
T Consensus 130 ~~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~-~ipvIA-----~GG-I-~t~-------~ 194 (232)
T 3igs_A 130 LLTMADCSSVDDGLACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA-GCRVIA-----EGR-Y-NSP-------A 194 (232)
T ss_dssp CEEEEECCSHHHHHHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT-TCCEEE-----ESC-C-CSH-------H
T ss_pred CEEEEeCCCHHHHHHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc-CCcEEE-----ECC-C-CCH-------H
Confidence 344467789999999999999998432 223222 246789999999887 888753 344 2 122 6
Q ss_pred HHHHHHHcCCCEEEEe
Q psy7930 87 DCHQFVESGADGFVIG 102 (146)
Q Consensus 87 dI~~~~~~GadG~VfG 102 (146)
|+..+.++|+|||++|
T Consensus 195 d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 195 LAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEe
Confidence 7777889999999999
No 21
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=96.56 E-value=0.013 Score=44.82 Aligned_cols=97 Identities=19% Similarity=0.285 Sum_probs=67.3
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEec----CCCCCC-CCCCCHHHHHHHHhhCC-CcEEEEEccCCCCCcccCHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELC----AALSEG-GLTPTLGLYRVIKRLVL-VPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc----~~l~~G-GlTPS~g~i~~~~~~~~-ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
.++.+-+.|.+++..|.+.|+|.|=+- +.-..| |.+.....++++++..+ +||.+. || =. .
T Consensus 117 ~~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~-----GG-I~--~----- 183 (227)
T 2tps_A 117 MILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGI-----GG-IT--I----- 183 (227)
T ss_dssp SEEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEE-----SS-CC--T-----
T ss_pred cEEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEE-----cC-CC--H-----
Confidence 466777789999999999999999862 121222 34456788998888777 887653 33 11 1
Q ss_pred HHHHHHHHHHcCCCEEEEee-ecCCCCcCH-HHHHHHHHHhC
Q psy7930 84 MALDCHQFVESGADGFVIGA-LTGEQEIDI-EFIRQLKTIIG 123 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG~-L~~dg~iD~-~~~~~Li~~a~ 123 (146)
+++..+.++|++||++|- +... -|. +.++++++..+
T Consensus 184 --~nv~~~~~~Ga~gv~vgs~i~~~--~d~~~~~~~~~~~~~ 221 (227)
T 2tps_A 184 --DNAAPVIQAGADGVSMISAISQA--EDPESAARKFREEIQ 221 (227)
T ss_dssp --TTSHHHHHTTCSEEEESHHHHTS--SCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCEEEEhHHhhcC--CCHHHHHHHHHHHHH
Confidence 357777789999999994 3222 466 78888877654
No 22
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.49 E-value=0.006 Score=46.56 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=46.4
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+.+..+.++|++.|+|... +|+ ...++.+++..++|+. | |+++++++ ++++.+.++|+|+
T Consensus 23 ~~~~~~~~~G~~~i~l~~~------~~~~~~~i~~i~~~~~~~l~--v----g~g~~~~~-------~~i~~a~~~Gad~ 83 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPLN------SPQWEQSIPAIVDAYGDKAL--I----GAGTVLKP-------EQVDALARMGCQL 83 (212)
T ss_dssp HHHHHHHHHTCCEEEEETT------STTHHHHHHHHHHHHTTTSE--E----EEECCCSH-------HHHHHHHHTTCCE
T ss_pred HHHHHHHHCCCCEEEEeCC------ChhHHHHHHHHHHhCCCCeE--E----EeccccCH-------HHHHHHHHcCCCE
Confidence 4567788999999999754 243 4566666666566654 4 33466765 3688899999999
Q ss_pred EEEee
Q psy7930 99 FVIGA 103 (146)
Q Consensus 99 ~VfG~ 103 (146)
|++|.
T Consensus 84 V~~~~ 88 (212)
T 2v82_A 84 IVTPN 88 (212)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 99775
No 23
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=96.47 E-value=0.075 Score=41.18 Aligned_cols=103 Identities=11% Similarity=-0.002 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCccc-------C----HHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVF-------S----QAEKEIMALDC 88 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y-------s----~~E~~~M~~dI 88 (146)
+.+..+.+.|.+-|||.... + -+..-+++..+..++.+..+--| .++|.. + +.-++.+++-|
T Consensus 27 ~~l~~~~~~G~~~vEl~~~~---~--~~~~~~~~~l~~~gl~~~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~i 99 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFPY---D--FDADVIARELKQHNLTQVLFNMP--PGDWAAGERGMAAISGREQEFRDNVDIAL 99 (269)
T ss_dssp HHHHHHHHTTCSEEECSCCT---T--SCHHHHHHHHHHTTCEEEEEECC--CSCTTTTCCBCTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCc---c--CCHHHHHHHHHHcCCcEEEEecC--CCccccCCCCcCCCccHHHHHHHHHHHHH
Confidence 45667888999999998632 2 24677777777889988776656 334432 1 24567889999
Q ss_pred HHHHHcCCCEEEEeeecCCCCcC--------HHHHHHHHHHhC--CCCeEEe
Q psy7930 89 HQFVESGADGFVIGALTGEQEID--------IEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~dg~iD--------~~~~~~Li~~a~--~~~vtFH 130 (146)
+.++++|++-+|+..=.+++ .+ .+.++++.+.|+ |+.+.+|
T Consensus 100 ~~A~~lGa~~v~~~~g~~~~-~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 100 HYALALDCRTLHAMSGITEG-LDRKACEETFIENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp HHHHHTTCCEEECCBCBCTT-SCHHHHHHHHHHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHcCCCEEEEccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 99999999999973213333 22 345666777665 6777776
No 24
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.46 E-value=0.0082 Score=49.09 Aligned_cols=86 Identities=20% Similarity=0.230 Sum_probs=62.1
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+-|...+++||+-|.+...- +..- |...++.+++.+++||. | .||..++.+ +..++++||||
T Consensus 76 ~~A~~y~~~GA~~isvltd~---~~f~Gs~~~l~~ir~~v~lPvl---~----kdfiid~~q-------v~~A~~~GAD~ 138 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQ---RRFQGSLDDLDAVRASVSIPVL---R----KDFVVQPYQ-------IHEARAHGADM 138 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCG---GGHHHHHHHHHHHHHHCSSCEE---E----ESCCCSHHH-------HHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEecCh---hhcCCCHHHHHHHHHhCCCCEE---E----CccccCHHH-------HHHHHHcCCCE
Confidence 45667788999999987531 1111 45689999999999995 2 268888763 56677899999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhC--CCC
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIG--DRP 126 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~--~~~ 126 (146)
|.+|.-+ ++.+.+++|++.++ |+.
T Consensus 139 VlLi~a~----l~~~~l~~l~~~a~~lGl~ 164 (272)
T 3qja_A 139 LLLIVAA----LEQSVLVSMLDRTESLGMT 164 (272)
T ss_dssp EEEEGGG----SCHHHHHHHHHHHHHTTCE
T ss_pred EEEeccc----CCHHHHHHHHHHHHHCCCc
Confidence 9998532 34567888888887 444
No 25
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=96.46 E-value=0.0034 Score=48.96 Aligned_cols=88 Identities=19% Similarity=0.141 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCCEEEecCCC-CCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 19 VASALAAVRGGADRLELCAAL-SEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l-~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
.+-+..++++||+.|.+..-- ...|.++....++.+++..++|+.+. | +..+. +|++.+.+.|||
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~------g-gI~~~-------~~~~~~~~~Gad 98 (253)
T 1thf_D 33 VELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVG------G-GIHDF-------ETASELILRGAD 98 (253)
T ss_dssp HHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEE------S-SCCSH-------HHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEe------C-CCCCH-------HHHHHHHHcCCC
Confidence 345677889999999988522 12345566778898998889998763 1 22232 568888889999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+|++|...-. |.+.+.++++..+
T Consensus 99 ~V~lg~~~l~---~p~~~~~~~~~~g 121 (253)
T 1thf_D 99 KVSINTAAVE---NPSLITQIAQTFG 121 (253)
T ss_dssp EEEESHHHHH---CTHHHHHHHHHHC
T ss_pred EEEEChHHHh---ChHHHHHHHHHcC
Confidence 9999975422 2345566665543
No 26
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=96.45 E-value=0.056 Score=42.11 Aligned_cols=106 Identities=11% Similarity=-0.020 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCH-----HHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQ-----AEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~-----~E~~~M~~dI~~~~~~ 94 (146)
+.+..+.+.|.+-|||...- +-....-++...+..++.+..+--| -.+++.-.+ .-++.+++-|+.++++
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gl~v~~~~~~-~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 116 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGG----LAGRVNEIKQALNGRNIKVSAICAG-FKGFILSTDPAIRKECMDTMKEIIAAAGEL 116 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTT----CGGGHHHHHHHHTTSSCEECEEECC-CCSCTTBSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCCc----hHHHHHHHHHHHHHcCCeEEEEecC-CCCcCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 44667888999999999751 2235666777777778887665444 345443322 2357888999999999
Q ss_pred CCCEEEEeee--cCCCCc-C--------HHHHHHHHHHhC--CCCeEEe
Q psy7930 95 GADGFVIGAL--TGEQEI-D--------IEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 95 GadG~VfG~L--~~dg~i-D--------~~~~~~Li~~a~--~~~vtFH 130 (146)
|++.+|+..- ..++.. + .+.++++.+.|+ |+.+.+|
T Consensus 117 Ga~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 117 GSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp TCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999998531 111111 1 456677777664 7888887
No 27
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.43 E-value=0.0049 Score=46.76 Aligned_cols=95 Identities=22% Similarity=0.280 Sum_probs=56.6
Q ss_pred ceeEE-EecCHHHHHHHHHcCCCEEEecCCCCC---------------CCCCCC----------------------HHHH
Q psy7930 10 TTLEV-CVDSVASALAAVRGGADRLELCAALSE---------------GGLTPT----------------------LGLY 51 (146)
Q Consensus 10 ~~lEv-cv~s~~~a~~A~~~GAdRIELc~~l~~---------------GGlTPS----------------------~g~i 51 (146)
.++.+ .+.|++++..|.+.|||-| +...+.. |..||+ ...+
T Consensus 63 ~~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~ 141 (205)
T 1wa3_A 63 AIIGAGTVTSVEQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFV 141 (205)
T ss_dssp CEEEEESCCSHHHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred cEEEecccCCHHHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHH
Confidence 44555 5678999999999999999 6554430 112232 2344
Q ss_pred HHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee-ecCCCC---cCHHHHHHHHHHh
Q psy7930 52 RVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA-LTGEQE---IDIEFIRQLKTII 122 (146)
Q Consensus 52 ~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~-L~~dg~---iD~~~~~~Li~~a 122 (146)
+++++.. ++||. + -|| - +. +++..+.++|+|||++|- +.. +. + .++++++++..
T Consensus 142 ~~l~~~~~~~pvi----a-~GG-I--~~-------~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~-~~~~~~~~~~~ 200 (205)
T 1wa3_A 142 KAMKGPFPNVKFV----P-TGG-V--NL-------DNVCEWFKAGVLAVGVGSALVK-GTPDEV-REKAKAFVEKI 200 (205)
T ss_dssp HHHHTTCTTCEEE----E-BSS-C--CT-------TTHHHHHHHTCSCEEECHHHHC-SCHHHH-HHHHHHHHHHH
T ss_pred HHHHHhCCCCcEE----E-cCC-C--CH-------HHHHHHHHCCCCEEEECccccC-CCHHHH-HHHHHHHHHHH
Confidence 4444544 45543 2 344 2 11 467888899999999984 443 32 2 45555665543
No 28
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=96.37 E-value=0.025 Score=46.05 Aligned_cols=72 Identities=19% Similarity=0.177 Sum_probs=54.1
Q ss_pred EecCHHHHHHHHHcCCCEE-Eec----CCCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRL-ELC----AALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRI-ELc----~~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
-++..+-+..++++||+-| +|| ..-..+| +-.+...++.+++.+++|+.+=+|+ | | ..+
T Consensus 27 ~~~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~---g-~----------~~~ 92 (305)
T 2nv1_A 27 DVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARI---G-H----------IVE 92 (305)
T ss_dssp EESSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECT---T-C----------HHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccc---c-c----------hHH
Confidence 4577889999999999999 776 2223455 5557899999999999999877776 2 2 245
Q ss_pred HHHHHHcCCCEEE
Q psy7930 88 CHQFVESGADGFV 100 (146)
Q Consensus 88 I~~~~~~GadG~V 100 (146)
++.+.++|||+|+
T Consensus 93 ~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 93 ARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHTCSEEE
T ss_pred HHHHHHCCCCEEE
Confidence 6677789999997
No 29
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.37 E-value=0.014 Score=47.78 Aligned_cols=104 Identities=23% Similarity=0.256 Sum_probs=68.3
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCCC-----CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGLT-----PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGlT-----PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
.-+.+.+++..+++.|+|-|-+ .+...||.+ |+..+++++++.+++||.+- || .. +. +|+
T Consensus 123 ~~v~t~~~a~~~~~~GaD~i~v-~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaa-----GG-I~-~~-------~~v 187 (328)
T 2gjl_A 123 HKCTAVRHALKAERLGVDAVSI-DGFECAGHPGEDDIPGLVLLPAAANRLRVPIIAS-----GG-FA-DG-------RGL 187 (328)
T ss_dssp EEESSHHHHHHHHHTTCSEEEE-ECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEE-----SS-CC-SH-------HHH
T ss_pred eeCCCHHHHHHHHHcCCCEEEE-ECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEE-----CC-CC-CH-------HHH
Confidence 4578999999999999999986 344446542 67889999998889998542 34 22 22 356
Q ss_pred HHHHHcCCCEEEEee--e-cCCCCcCHHHHHHHHHHhCCCCeEEeecc
Q psy7930 89 HQFVESGADGFVIGA--L-TGEQEIDIEFIRQLKTIIGDRPITFHRAF 133 (146)
Q Consensus 89 ~~~~~~GadG~VfG~--L-~~dg~iD~~~~~~Li~~a~~~~vtFHRAF 133 (146)
..+.++|||||++|= + +++-..... .++.+..+..-....-+.|
T Consensus 188 ~~al~~GAdgV~vGs~~~~~~e~~~~~~-~k~~~~~~~~~~~~~~~~~ 234 (328)
T 2gjl_A 188 VAALALGADAINMGTRFLATRECPIHPA-VKAAIRAADERSTDLIMRS 234 (328)
T ss_dssp HHHHHHTCSEEEESHHHHTSSSSCSCHH-HHHHHHHCCTTCEEEECGG
T ss_pred HHHHHcCCCEEEECHHHHcCccccccHH-HHHHHHhcccccEEEeecc
Confidence 666678999999992 2 233334443 4444444554454444444
No 30
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.32 E-value=0.05 Score=45.46 Aligned_cols=114 Identities=18% Similarity=0.194 Sum_probs=71.4
Q ss_pred ceeEEEecCHH----HHHHHHHcCCCEEEecCCCC--------CCC-C--CC--CHHHHHHHHhhCCCcEEEEEccCCCC
Q psy7930 10 TTLEVCVDSVA----SALAAVRGGADRLELCAALS--------EGG-L--TP--TLGLYRVIKRLVLVPVFVMIRVRAGF 72 (146)
Q Consensus 10 ~~lEvcv~s~~----~a~~A~~~GAdRIELc~~l~--------~GG-l--TP--S~g~i~~~~~~~~ipv~vMIRP~R~g 72 (146)
+.+.++..+++ .+..+++.|+|-|||+.+-. -|| + .| -..+++.+++.+++||.|=||+ -..
T Consensus 60 ~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~-g~~ 138 (350)
T 3b0p_A 60 IALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL-GLE 138 (350)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES-CBT
T ss_pred EEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec-CcC
Confidence 45666665554 34556678999999986411 111 1 11 1235566667779999998898 322
Q ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCC----C-------CcCHHHHHHHHHHhCCCCeE
Q psy7930 73 DFVFSQAEKEIMALDCHQFVESGADGFVIGALTGE----Q-------EIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 73 dF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~d----g-------~iD~~~~~~Li~~a~~~~vt 128 (146)
++ ...+...+-++.+.+.|+|+|++-.-+.. | ..|.+.++++.+...++|+.
T Consensus 139 ~~----~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVi 201 (350)
T 3b0p_A 139 GK----ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFV 201 (350)
T ss_dssp TC----CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEE
T ss_pred cc----ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEE
Confidence 22 12334556678888999999998543321 1 25788888888776455554
No 31
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.32 E-value=0.029 Score=43.34 Aligned_cols=91 Identities=18% Similarity=0.272 Sum_probs=60.7
Q ss_pred eEEEecCHHHHHHHHHcCCCEEE-ecCCCCCCC---CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 12 LEVCVDSVASALAAVRGGADRLE-LCAALSEGG---LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIE-Lc~~l~~GG---lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+=+-+.+++++..|.+.|||.|- ++.....|. ..|.+.+++++++. ++||.+ -|| - -|. +|
T Consensus 136 v~~~~~t~~ea~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~-~ipvia-----~GG-I-~s~-------~~ 200 (234)
T 1yxy_A 136 LMADISTFDEGLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA-GIAVIA-----EGK-I-HSP-------EE 200 (234)
T ss_dssp EEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT-TCCEEE-----ESC-C-CSH-------HH
T ss_pred EEEeCCCHHHHHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC-CCCEEE-----ECC-C-CCH-------HH
Confidence 33445789999999999999994 233332222 34668889999887 888765 344 1 122 57
Q ss_pred HHHHHHcCCCEEEEee-ecCCCCcCHHHHHHHHHH
Q psy7930 88 CHQFVESGADGFVIGA-LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 88 I~~~~~~GadG~VfG~-L~~dg~iD~~~~~~Li~~ 121 (146)
+..+.++|||||++|= |.. -....++|.++
T Consensus 201 ~~~~~~~Gad~v~vGsal~~----p~~~~~~l~~~ 231 (234)
T 1yxy_A 201 AKKINDLGVAGIVVGGAITR----PKEIAERFIEA 231 (234)
T ss_dssp HHHHHTTCCSEEEECHHHHC----HHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEchHHhC----hHHHHHHHHHH
Confidence 7778889999999993 332 34555666554
No 32
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=96.31 E-value=0.019 Score=47.69 Aligned_cols=79 Identities=19% Similarity=0.128 Sum_probs=57.3
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCC--------CCCCCCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAAL--------SEGGLTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQA 79 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l--------~~GGlTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~ 79 (146)
+++.=.+.+.++|..|++.|||.|-+-..- ..|+-+| +...+.++++.+++||..- || ....
T Consensus 151 ~vi~G~v~s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~-----GG-I~~g-- 222 (336)
T 1ypf_A 151 FVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIAD-----GG-IRTN-- 222 (336)
T ss_dssp EEEEEEECSHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEE-----SC-CCST--
T ss_pred EEEECCcCCHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEe-----CC-CCCH--
Confidence 344445789999999999999999994321 0223346 6788888888889998652 33 2222
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 80 EKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+|||+|.+|
T Consensus 223 ------~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 223 ------GDVAKSIRFGATMVMIG 239 (336)
T ss_dssp ------HHHHHHHHTTCSEEEES
T ss_pred ------HHHHHHHHcCCCEEEeC
Confidence 67888888999999999
No 33
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=96.27 E-value=0.025 Score=43.38 Aligned_cols=98 Identities=19% Similarity=0.264 Sum_probs=64.6
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCC----CCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAAL----SEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l----~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
..++-+.+.|.+++..|.+.|||.|=+-.-. ..|+.+.+...++++++..++||.+ -|| - |.
T Consensus 110 ~~~ig~sv~t~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia-----~GG-I--~~------ 175 (221)
T 1yad_A 110 HLHIGRSVHSLEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIA-----IGG-M--TP------ 175 (221)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEE-----ESS-C--CG------
T ss_pred CCEEEEEcCCHHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEE-----ECC-C--CH------
Confidence 4556678889999999999999999663311 1122222456788887777889755 255 2 32
Q ss_pred HHHHHHHHHcCCCEEEEee-ecCCCCcC-HHHHHHHHHHhC
Q psy7930 85 ALDCHQFVESGADGFVIGA-LTGEQEID-IEFIRQLKTIIG 123 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~-L~~dg~iD-~~~~~~Li~~a~ 123 (146)
+++..+.+.|++||++|= +... =| .+.++++++..+
T Consensus 176 -~nv~~~~~~Ga~gv~vgs~i~~~--~d~~~~~~~~~~~~~ 213 (221)
T 1yad_A 176 -DRLRDVKQAGADGIAVMSGIFSS--AEPLEAARRYSRKLK 213 (221)
T ss_dssp -GGHHHHHHTTCSEEEESHHHHTS--SSHHHHHHHHHHHHH
T ss_pred -HHHHHHHHcCCCEEEEhHHhhCC--CCHHHHHHHHHHHHH
Confidence 467778889999999983 2211 24 677777776553
No 34
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=96.26 E-value=0.011 Score=48.87 Aligned_cols=79 Identities=30% Similarity=0.316 Sum_probs=59.5
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
.++||-|+|++++..|.+.|||.|=|=. ++...++++++.+ ++|+.+ -|| .. .+.
T Consensus 197 ~~IgVev~t~eea~eA~~aGaD~I~ld~--------~~~~~~k~av~~v~~~ipi~A-----sGG-It---------~en 253 (286)
T 1x1o_A 197 LKVEVEVRSLEELEEALEAGADLILLDN--------FPLEALREAVRRVGGRVPLEA-----SGN-MT---------LER 253 (286)
T ss_dssp SCEEEEESSHHHHHHHHHHTCSEEEEES--------CCHHHHHHHHHHHTTSSCEEE-----ESS-CC---------HHH
T ss_pred CEEEEEeCCHHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhCCCCeEEE-----EcC-CC---------HHH
Confidence 5789999999999999999999986643 3556677777765 567654 355 22 467
Q ss_pred HHHHHHcCCCEEEEeeecCC-CCcC
Q psy7930 88 CHQFVESGADGFVIGALTGE-QEID 111 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~d-g~iD 111 (146)
|..+.+.|+|+|.+|.++.+ ..+|
T Consensus 254 i~~~a~tGvD~IsVgs~~~~a~~~D 278 (286)
T 1x1o_A 254 AKAAAEAGVDYVSVGALTHSAKALD 278 (286)
T ss_dssp HHHHHHHTCSEEECTHHHHSCCCCC
T ss_pred HHHHHHcCCCEEEEcHHHcCCCcee
Confidence 88999999999999997754 3344
No 35
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.26 E-value=0.0082 Score=50.07 Aligned_cols=77 Identities=19% Similarity=0.116 Sum_probs=59.6
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
..+||-|+|++++..|.++|||.|=|= + .|.+.++++.+..+- ++.|-. .||= . .+.|+
T Consensus 199 ~~IeVEv~tl~ea~eAl~aGaD~I~LD-n-------~~~~~l~~av~~~~~--~v~iea-SGGI-t---------~~~i~ 257 (287)
T 3tqv_A 199 KVVEVEVTNLDELNQAIAAKADIVMLD-N-------FSGEDIDIAVSIARG--KVALEV-SGNI-D---------RNSIV 257 (287)
T ss_dssp SCEEEEESSHHHHHHHHHTTCSEEEEE-S-------CCHHHHHHHHHHHTT--TCEEEE-ESSC-C---------TTTHH
T ss_pred CcEEEEeCCHHHHHHHHHcCCCEEEEc-C-------CCHHHHHHHHHhhcC--CceEEE-ECCC-C---------HHHHH
Confidence 479999999999999999999999883 2 667889988876531 233444 4552 1 25678
Q ss_pred HHHHcCCCEEEEeeecCC
Q psy7930 90 QFVESGADGFVIGALTGE 107 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~d 107 (146)
.+.+.|+|.|.+|.||.+
T Consensus 258 ~~a~tGVD~IsvGalt~s 275 (287)
T 3tqv_A 258 AIAKTGVDFISVGAITKH 275 (287)
T ss_dssp HHHTTTCSEEECSHHHHS
T ss_pred HHHHcCCCEEEEChhhcC
Confidence 889999999999999854
No 36
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=96.22 E-value=0.045 Score=42.24 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=60.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCC--CCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRA--GFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R--~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+-+.++.++|++-|++. +...++.+++.+++|+...+|. . ++.+.-++ =.++++.+.++|+|
T Consensus 40 ~~a~~~~~~G~~~i~~~----------~~~~i~~i~~~~~~p~i~~~~~-~~~~~~~~i~~-----~~~~i~~~~~~Gad 103 (234)
T 1yxy_A 40 LMAKAAQEAGAVGIRAN----------SVRDIKEIQAITDLPIIGIIKK-DYPPQEPFITA-----TMTEVDQLAALNIA 103 (234)
T ss_dssp HHHHHHHHHTCSEEEEE----------SHHHHHHHHTTCCSCEEEECBC-CCTTSCCCBSC-----SHHHHHHHHTTTCS
T ss_pred HHHHHHHHCCCcEeecC----------CHHHHHHHHHhCCCCEEeeEcC-CCCccccccCC-----hHHHHHHHHHcCCC
Confidence 45677889999999874 4578999999999999666664 2 22232221 12457778999999
Q ss_pred EEEEeeecC---CCCcCHHHHHHHHHHhCCCCeE
Q psy7930 98 GFVIGALTG---EQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 98 G~VfG~L~~---dg~iD~~~~~~Li~~a~~~~vt 128 (146)
.|.++.-.. +|....+.++++.+...++++.
T Consensus 104 ~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~ 137 (234)
T 1yxy_A 104 VIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLM 137 (234)
T ss_dssp EEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEE
T ss_pred EEEEcccccCCCCCccHHHHHHHHHHhCCCCeEE
Confidence 999998642 2222245565555554455543
No 37
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=96.20 E-value=0.093 Score=42.01 Aligned_cols=107 Identities=13% Similarity=0.072 Sum_probs=68.9
Q ss_pred HHHHHHHcCCCEEEecCC-CC---CCCCCC------CHHHHHHHHhhCCCcEEEEEccCCC-CCcccC--HHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAA-LS---EGGLTP------TLGLYRVIKRLVLVPVFVMIRVRAG-FDFVFS--QAEKEIMALD 87 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~-l~---~GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~-gdF~Ys--~~E~~~M~~d 87 (146)
.+..|.+.|.+-|||... .. ..|.+| ....++...+..++.+..+--| -. .+|.-. +.-++.+++-
T Consensus 41 ~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 119 (305)
T 3obe_A 41 GLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLT-PSLREYTKENMPKFDEFWKKA 119 (305)
T ss_dssp HHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCC-CSCCCCCGGGHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecc-ccccccchhhHHHHHHHHHHH
Confidence 345788899999999852 11 235544 4667777777889988766444 21 111111 3447789999
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcC-------HHHHHHHHHHhC--CCCeEEe
Q psy7930 88 CHQFVESGADGFVIGALTGEQEID-------IEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD-------~~~~~~Li~~a~--~~~vtFH 130 (146)
|+.++++|++-+|++...+. .+ .+.++++.+.|+ |+.+.+|
T Consensus 120 i~~A~~lG~~~v~~~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 169 (305)
T 3obe_A 120 TDIHAELGVSCMVQPSLPRI--ENEDDAKVVSEIFNRAGEITKKAGILWGYH 169 (305)
T ss_dssp HHHHHHHTCSEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHcCCCEEEeCCCCCC--CCHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 99999999999998754332 22 245566666665 6666665
No 38
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=96.19 E-value=0.012 Score=45.60 Aligned_cols=88 Identities=15% Similarity=0.086 Sum_probs=58.8
Q ss_pred cCHHHHHHHHHcCCCEEEecC-CCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCA-ALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~-~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+-.+-+..++++||+.|.+.. .-..+|..+. ..++++++.+++|+.+ +++..+. ++++.+.++|
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v-------~ggi~~~-------~~~~~~l~~G 96 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKLDVQVEL-------SGGIRDD-------ESLAAALATG 96 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHCSSEEEE-------ESSCCSH-------HHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhcCCcEEE-------ECCCCCH-------HHHHHHHHcC
Confidence 344667788899999999974 1122333333 9999999999999865 2244443 3477778899
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
||+|++|.-.- -|.+.+.++++..
T Consensus 97 ad~V~lg~~~l---~~p~~~~~~~~~~ 120 (244)
T 2y88_A 97 CARVNVGTAAL---ENPQWCARVIGEH 120 (244)
T ss_dssp CSEEEECHHHH---HCHHHHHHHHHHH
T ss_pred CCEEEECchHh---hChHHHHHHHHHc
Confidence 99999997321 1245566666554
No 39
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=96.16 E-value=0.007 Score=50.23 Aligned_cols=75 Identities=28% Similarity=0.211 Sum_probs=56.2
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
..+||-|+|++++..|.+.|||.|=|=. .+...++++++.+ ++|+.+ -|| ..
T Consensus 194 ~~I~VEV~tleea~eA~~aGaD~I~LDn--------~~~e~l~~av~~l~~~~~~v~ieA-----SGG-It--------- 250 (285)
T 1o4u_A 194 TKIEVEVENLEDALRAVEAGADIVMLDN--------LSPEEVKDISRRIKDINPNVIVEV-----SGG-IT--------- 250 (285)
T ss_dssp SCEEEEESSHHHHHHHHHTTCSEEEEES--------CCHHHHHHHHHHHHHHCTTSEEEE-----EEC-CC---------
T ss_pred ceEEEEeCCHHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCceEEE-----ECC-CC---------
Confidence 4678889999999999999999986644 4667777777665 444433 233 32
Q ss_pred HHHHHHHHHcCCCEEEEeeecCC
Q psy7930 85 ALDCHQFVESGADGFVIGALTGE 107 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~L~~d 107 (146)
.+.|+.+.+.|+|+|++|.++-+
T Consensus 251 ~eni~~~a~tGVD~IsvGslt~s 273 (285)
T 1o4u_A 251 EENVSLYDFETVDVISSSRLTLQ 273 (285)
T ss_dssp TTTGGGGCCTTCCEEEEGGGTSS
T ss_pred HHHHHHHHHcCCCEEEEeHHHcC
Confidence 25678888999999999998764
No 40
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.15 E-value=0.0083 Score=50.78 Aligned_cols=77 Identities=23% Similarity=0.270 Sum_probs=59.9
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
..+||-|+|++++..|.+.|||.|=|= + .+.+.++++++.++- ++.|-. .|| -. .+.|+
T Consensus 232 ~kIeVEVdtldea~eAl~aGaD~I~LD-n-------~~~~~l~~av~~l~~--~v~iea-SGG-It---------~~~I~ 290 (320)
T 3paj_A 232 KPVEVETETLAELEEAISAGADIIMLD-N-------FSLEMMREAVKINAG--RAALEN-SGN-IT---------LDNLK 290 (320)
T ss_dssp SCEEEEESSHHHHHHHHHTTCSEEEEE-S-------CCHHHHHHHHHHHTT--SSEEEE-ESS-CC---------HHHHH
T ss_pred CeEEEEECCHHHHHHHHHcCCCEEEEC-C-------CCHHHHHHHHHHhCC--CCeEEE-ECC-CC---------HHHHH
Confidence 378999999999999999999999883 3 467889988886531 234444 455 33 46788
Q ss_pred HHHHcCCCEEEEeeecCC
Q psy7930 90 QFVESGADGFVIGALTGE 107 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~d 107 (146)
.+.+.|+|+|.+|.|+.+
T Consensus 291 ~~a~tGVD~isvGalt~s 308 (320)
T 3paj_A 291 ECAETGVDYISVGALTKH 308 (320)
T ss_dssp HHHTTTCSEEECTHHHHS
T ss_pred HHHHcCCCEEEECceecC
Confidence 889999999999999854
No 41
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=96.10 E-value=0.0094 Score=46.34 Aligned_cols=87 Identities=25% Similarity=0.214 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCC-CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEG-GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~G-GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
.+-+..++++|||.|.+.+--..| |..+....++++++.+++||.++= +.-+. ++++.+.++|||
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~G-------gi~~~-------~~~~~~~~~Gad 99 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGG-------GVRSL-------EDARKLLLSGAD 99 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEES-------SCCSH-------HHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEEC-------CcCCH-------HHHHHHHHcCCC
Confidence 455677889999999887422111 333456778888888899997742 22232 478888889999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
||++|...-. |.+.++++.+..
T Consensus 100 ~V~lg~~~l~---~p~~~~~~~~~~ 121 (252)
T 1ka9_F 100 KVSVNSAAVR---RPELIRELADHF 121 (252)
T ss_dssp EEEECHHHHH---CTHHHHHHHHHH
T ss_pred EEEEChHHHh---CcHHHHHHHHHc
Confidence 9999975422 123455555554
No 42
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=96.07 E-value=0.033 Score=44.73 Aligned_cols=97 Identities=25% Similarity=0.287 Sum_probs=64.3
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCCCCC---CC-CCCHHHHHHHHhh--CCCcEEEEEccCCCCCcccCHHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAALSEG---GL-TPTLGLYRVIKRL--VLVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~G---Gl-TPS~g~i~~~~~~--~~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
..++-+.+.|.+++..|.+.|||-|=+..-.... +. ..+...++.+++. .++||++. ||= +.
T Consensus 135 ~~~iG~S~ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAi-----GGI---~~---- 202 (243)
T 3o63_A 135 DTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAI-----GGI---NA---- 202 (243)
T ss_dssp TCEEEEEECSHHHHHHHHHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEE-----SSC---CT----
T ss_pred CCEEEEeCCCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEe-----cCC---CH----
Confidence 4567778899999999999999999885422211 11 2357788888876 48898775 441 21
Q ss_pred HHHHHHHHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHHH
Q psy7930 83 IMALDCHQFVESGADGFVIG-ALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~~ 121 (146)
+++..++++|++||++| ++..... -..++++|.+.
T Consensus 203 ---~ni~~~~~aGa~gvav~sai~~a~d-p~~a~~~l~~~ 238 (243)
T 3o63_A 203 ---QRLPAVLDAGARRIVVVRAITSADD-PRAAAEQLRSA 238 (243)
T ss_dssp ---TTHHHHHHTTCCCEEESHHHHTCSS-HHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCEEEEeHHHhCCCC-HHHHHHHHHHH
Confidence 47788899999999986 3443221 13445555543
No 43
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.06 E-value=0.027 Score=45.54 Aligned_cols=82 Identities=11% Similarity=-0.029 Sum_probs=53.3
Q ss_pred eeEEEecCHHH----HHHHHHcCCC-EEEecCC--CCCC----CCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccC
Q psy7930 11 TLEVCVDSVAS----ALAAVRGGAD-RLELCAA--LSEG----GLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 11 ~lEvcv~s~~~----a~~A~~~GAd-RIELc~~--l~~G----GlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys 77 (146)
...+.-.++++ +..+.+.|+| -|||+-+ ...| |-+|. ..+++.+++.+++||.|.|+| - ++
T Consensus 97 ~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~-~-----~~ 170 (311)
T 1jub_A 97 FFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPP-Y-----FD 170 (311)
T ss_dssp EEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC-C-----CS
T ss_pred EEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECC-C-----CC
Confidence 34455455544 4455678999 9999642 1122 22332 457777777789999999999 2 25
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEE
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~Vf 101 (146)
.+|+. +=.+.+.++|+|++++
T Consensus 171 ~~~~~---~~a~~~~~~G~d~i~v 191 (311)
T 1jub_A 171 LVHFD---IMAEILNQFPLTYVNS 191 (311)
T ss_dssp HHHHH---HHHHHHTTSCCCEEEE
T ss_pred HHHHH---HHHHHHHHcCCcEEEe
Confidence 55543 3356778899999986
No 44
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.98 E-value=0.028 Score=46.44 Aligned_cols=103 Identities=22% Similarity=0.236 Sum_probs=68.1
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCC---CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGL---TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGl---TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
+.+.+.+.+..+++.|+|-|=+-. ...||. .|+..+++++++.+++||.+ -|| .. |. +|+..
T Consensus 129 ~~v~s~~~a~~a~~~GaD~i~v~g-~~~GG~~G~~~~~~ll~~i~~~~~iPvia-----aGG-I~-~~-------~dv~~ 193 (326)
T 3bo9_A 129 PVVASDSLARMVERAGADAVIAEG-MESGGHIGEVTTFVLVNKVSRSVNIPVIA-----AGG-IA-DG-------RGMAA 193 (326)
T ss_dssp EEESSHHHHHHHHHTTCSCEEEEC-TTSSEECCSSCHHHHHHHHHHHCSSCEEE-----ESS-CC-SH-------HHHHH
T ss_pred EEcCCHHHHHHHHHcCCCEEEEEC-CCCCccCCCccHHHHHHHHHHHcCCCEEE-----ECC-CC-CH-------HHHHH
Confidence 456899999999999999987743 234554 47889999999888999754 244 22 23 45666
Q ss_pred HHHcCCCEEEEee---ecCCCCcCHHHHHHHHHHhCCCCeEEeec
Q psy7930 91 FVESGADGFVIGA---LTGEQEIDIEFIRQLKTIIGDRPITFHRA 132 (146)
Q Consensus 91 ~~~~GadG~VfG~---L~~dg~iD~~~~~~Li~~a~~~~vtFHRA 132 (146)
+.++||+||.+|= .+++-...... ++.+-.+..-..+.-++
T Consensus 194 al~~GA~gV~vGs~~~~~~e~~~~~~~-k~~~~~~~~~~~~~~~~ 237 (326)
T 3bo9_A 194 AFALGAEAVQMGTRFVASVESDVHPVY-KEKIVKASIRDTVVTGA 237 (326)
T ss_dssp HHHHTCSEEEESHHHHTBSSCCSCHHH-HHHHHHCCTTCEEEECT
T ss_pred HHHhCCCEEEechHHHcCccccccHHH-HHHHHhcccccEEEecc
Confidence 6678999999992 24444455544 44443444444444344
No 45
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.98 E-value=0.031 Score=46.01 Aligned_cols=106 Identities=21% Similarity=0.181 Sum_probs=71.1
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCCCCC---CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSEGGL---TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGl---TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+=+-+.+.+.+..+++.|+|-|-+-+. ..||. .|+..+++++++.+++||.+- || .. +. +|+
T Consensus 113 v~~~v~~~~~a~~~~~~GaD~i~v~g~-~~GG~~g~~~~~~ll~~i~~~~~iPViaa-----GG-I~-~~-------~~~ 177 (332)
T 2z6i_A 113 VIPVVPSVALAKRMEKIGADAVIAEGM-EAGGHIGKLTTMTLVRQVATAISIPVIAA-----GG-IA-DG-------EGA 177 (332)
T ss_dssp EEEEESSHHHHHHHHHTTCSCEEEECT-TSSEECCSSCHHHHHHHHHHHCSSCEEEE-----SS-CC-SH-------HHH
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEEECC-CCCCCCCCccHHHHHHHHHHhcCCCEEEE-----CC-CC-CH-------HHH
Confidence 335679999999999999999988433 44654 567889999999899997542 44 22 23 356
Q ss_pred HHHHHcCCCEEEEee--e-cCCCCcCHHHHHHHHHHhCCCCeEEeecc
Q psy7930 89 HQFVESGADGFVIGA--L-TGEQEIDIEFIRQLKTIIGDRPITFHRAF 133 (146)
Q Consensus 89 ~~~~~~GadG~VfG~--L-~~dg~iD~~~~~~Li~~a~~~~vtFHRAF 133 (146)
..+.++|||||.+|= + +++-... +..++.+..++.-.++.-++|
T Consensus 178 ~~al~~GAdgV~vGs~~l~~~e~~~~-~~~k~~~~~~~~~d~~~~~~~ 224 (332)
T 2z6i_A 178 AAGFMLGAEAVQVGTRFVVAKESNAH-PNYKEKILKARDIDTTISAQH 224 (332)
T ss_dssp HHHHHTTCSEEEECHHHHTBTTCCSC-HHHHHHHHHCCTTCEEEESGG
T ss_pred HHHHHcCCCEEEecHHHhcCcccccc-HHHHHHHHhCCCcCEEEECCc
Confidence 666678999999992 2 3443333 344555555655555554544
No 46
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=95.97 E-value=0.1 Score=43.17 Aligned_cols=96 Identities=21% Similarity=0.225 Sum_probs=64.1
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC------CHHHHHHHHhhCCCcEEEEEccCCCCCc--
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP------TLGLYRVIKRLVLVPVFVMIRVRAGFDF-- 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~gdF-- 74 (146)
+.|..|.++|+|-|||..+- .-||. . ...+++.+++.+++||.|=|+| . +|
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs-lenr~r~~~eiv~avr~~v~~pv~vris~-~--~~~~ 223 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS-PENRYRFLREIIDEVKQVWDGPLFVRVSA-S--DYTD 223 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHCCSCEEEEEEC-C--CCST
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc-hhhhHHHHHHHHHHHHHHcCCcEEEEecC-c--ccCC
Confidence 66788899999999997531 12331 1 2567888888888898777777 2 33
Q ss_pred -ccCHHHHHHHHHHHHHHHHcCCCEEEEeeecC------CC-CcCHHHHHHHHHHh
Q psy7930 75 -VFSQAEKEIMALDCHQFVESGADGFVIGALTG------EQ-EIDIEFIRQLKTII 122 (146)
Q Consensus 75 -~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~------dg-~iD~~~~~~Li~~a 122 (146)
-++.+| ..+=++.+.+.|+|.+.+...+. .+ ..+.+.++++.+..
T Consensus 224 ~g~~~~~---~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (338)
T 1z41_A 224 KGLDIAD---HIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA 276 (338)
T ss_dssp TSCCHHH---HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred CCCCHHH---HHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC
Confidence 234444 44556778899999999876532 12 24667777777665
No 47
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.96 E-value=0.01 Score=45.29 Aligned_cols=73 Identities=23% Similarity=0.307 Sum_probs=51.6
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEG--GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~G--GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+..+-+..++++|+|.|++.. +... +..+....++.+++.+++|+.+.-. ..+. ++++.+.++
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~-~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~-------i~~~-------~~~~~~~~~ 98 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILD-ITAAPEGRATFIDSVKRVAEAVSIPVLVGGG-------VRSL-------EDATTLFRA 98 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEE-CCCCTTTHHHHHHHHHHHHHHCSSCEEEESS-------CCSH-------HHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEEe-CCccccCCcccHHHHHHHHHhcCCCEEEECC-------CCCH-------HHHHHHHHc
Confidence 456778888999999999974 2222 2234567888888888999876433 3333 346677788
Q ss_pred CCCEEEEeee
Q psy7930 95 GADGFVIGAL 104 (146)
Q Consensus 95 GadG~VfG~L 104 (146)
|||++.+|..
T Consensus 99 Gad~V~i~~~ 108 (253)
T 1h5y_A 99 GADKVSVNTA 108 (253)
T ss_dssp TCSEEEESHH
T ss_pred CCCEEEEChH
Confidence 9999999953
No 48
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.95 E-value=0.047 Score=45.50 Aligned_cols=107 Identities=24% Similarity=0.220 Sum_probs=68.4
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCC-------------C-HHHHHHHHhhCCCcEEEEEccCCCCCcccC
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSEGGLTP-------------T-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTP-------------S-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys 77 (146)
+=+.+.|++++..+++.|+|-|-+- +...||.+. + ..+++++++.+++||.+ -|| . .+
T Consensus 148 v~~~v~t~~~a~~a~~~GaD~i~v~-g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPVia-----aGG-I-~~ 219 (369)
T 3bw2_A 148 TLVTATTPEEARAVEAAGADAVIAQ-GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVA-----AGG-I-MR 219 (369)
T ss_dssp EEEEESSHHHHHHHHHTTCSEEEEE-CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEE-----ESS-C-CS
T ss_pred EEEECCCHHHHHHHHHcCCCEEEEe-CCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEE-----ECC-C-CC
Confidence 3345689999999999999999873 233455431 2 67888888888999754 244 2 23
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEee--e-cCCCCcCHHHHHHHHHHhCCCCeEEeeccc
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIGA--L-TGEQEIDIEFIRQLKTIIGDRPITFHRAFD 134 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG~--L-~~dg~iD~~~~~~Li~~a~~~~vtFHRAFD 134 (146)
. +++..+.++|||||++|= + +++-... +..++.+..|..-..++.+.|.
T Consensus 220 ~-------~~~~~~l~~GAd~V~vGs~~~~~~e~~~~-~~~k~~i~~~~~~~~~~~~~~~ 271 (369)
T 3bw2_A 220 G-------GQIAAVLAAGADAAQLGTAFLATDESGAP-GPHKRALTDPLFARTRLTRAFT 271 (369)
T ss_dssp H-------HHHHHHHHTTCSEEEESHHHHTSTTCCCC-HHHHHHTTCGGGCCEEEESTTT
T ss_pred H-------HHHHHHHHcCCCEEEEChHHhCCcccCcc-HHHHHHHHhCcCCCEEEEeccC
Confidence 3 456666679999999982 2 3343333 4445555444444455555554
No 49
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.95 E-value=0.021 Score=43.48 Aligned_cols=91 Identities=16% Similarity=0.268 Sum_probs=60.5
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC--CcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL--VPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~--ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+++ +.|++++..|.+.|+|.|=+.. ++ ..+...++++++..+ +||.+. || -. . +++
T Consensus 105 ~~g--~~t~~e~~~a~~~G~d~v~v~~----t~-~~g~~~~~~l~~~~~~~ipvia~-----GG-I~--~-------~~i 162 (212)
T 2v82_A 105 CPG--CATATEAFTALEAGAQALKIFP----SS-AFGPQYIKALKAVLPSDIAVFAV-----GG-VT--P-------ENL 162 (212)
T ss_dssp ECE--ECSHHHHHHHHHTTCSEEEETT----HH-HHCHHHHHHHHTTSCTTCEEEEE-----SS-CC--T-------TTH
T ss_pred Eee--cCCHHHHHHHHHCCCCEEEEec----CC-CCCHHHHHHHHHhccCCCeEEEe-----CC-CC--H-------HHH
Confidence 445 6899999999999999998732 11 124678888887765 776542 44 21 1 477
Q ss_pred HHHHHcCCCEEEEe-eecCC-CCc-C-HHHHHHHHHHhC
Q psy7930 89 HQFVESGADGFVIG-ALTGE-QEI-D-IEFIRQLKTIIG 123 (146)
Q Consensus 89 ~~~~~~GadG~VfG-~L~~d-g~i-D-~~~~~~Li~~a~ 123 (146)
..++++|++||++| .+... |.. | .+++++|.+..+
T Consensus 163 ~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~~l~~~~~ 201 (212)
T 2v82_A 163 AQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYR 201 (212)
T ss_dssp HHHHHHTCSEEEECTTTCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEChHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 88888999999999 55543 221 2 345566655543
No 50
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=95.94 E-value=0.078 Score=43.76 Aligned_cols=73 Identities=26% Similarity=0.228 Sum_probs=48.8
Q ss_pred CHHHHHH-HHHcCCCEEEecCCCCCCCC----CCC----HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 18 SVASALA-AVRGGADRLELCAALSEGGL----TPT----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 18 s~~~a~~-A~~~GAdRIELc~~l~~GGl----TPS----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+.+.... +++.|||-||+.-+-..... .|+ ...++.+++..++||.+.+.+ |.++ .+++
T Consensus 128 ~~~~~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~-----~~~~-------~~~a 195 (349)
T 1p0k_A 128 TAAQAKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVG-----FGMS-------KASA 195 (349)
T ss_dssp CHHHHHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEES-----SCCC-------HHHH
T ss_pred CHHHHHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecC-----CCCC-------HHHH
Confidence 4444433 45779999999854221111 333 467888888889999998865 2344 2457
Q ss_pred HHHHHcCCCEEEEe
Q psy7930 89 HQFVESGADGFVIG 102 (146)
Q Consensus 89 ~~~~~~GadG~VfG 102 (146)
+.+.++|+|+|++.
T Consensus 196 ~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 196 GKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHTCSEEEEE
T ss_pred HHHHHcCCCEEEEc
Confidence 88899999999994
No 51
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=95.92 E-value=0.28 Score=37.19 Aligned_cols=105 Identities=12% Similarity=-0.002 Sum_probs=69.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcc------cC-----HHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFV------FS-----QAEKEIMALDC 88 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~------Ys-----~~E~~~M~~dI 88 (146)
+.+..+.+.|.+-|||... .+. +...+++..+..++.+..+=-| .++|. .+ +.-++.+++-|
T Consensus 19 ~~l~~~~~~G~~~vEl~~~---~~~--~~~~~~~~l~~~gl~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP---YNY--STLQIQKQLEQNHLTLALFNTA--PGDINAGEWGLSALPGREHEAHADIDLAL 91 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC---TTS--CHHHHHHHHHHTTCEEEEEECC--CCCGGGTCSCSTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCC---CCC--CHHHHHHHHHHcCCceEEEecC--CcccccccCCCCCChhHHHHHHHHHHHHH
Confidence 4556778899999999863 222 3566777777788988775445 33442 11 34578899999
Q ss_pred HHHHHcCCCEEEEeeecCCCCcC--------HHHHHHHHHHhC--CCCeEEee
Q psy7930 89 HQFVESGADGFVIGALTGEQEID--------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~dg~iD--------~~~~~~Li~~a~--~~~vtFHR 131 (146)
+.++++|++-+|+..=......+ .+.++++.+.|+ |+.+.+|=
T Consensus 92 ~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~ 144 (260)
T 1k77_A 92 EYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEA 144 (260)
T ss_dssp HHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999999999883211111223 345667777775 66666653
No 52
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=95.84 E-value=0.016 Score=45.06 Aligned_cols=86 Identities=16% Similarity=0.116 Sum_probs=57.3
Q ss_pred HHHHHHHHHcCCCEEEecC-CCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 19 VASALAAVRGGADRLELCA-ALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~-~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
.+-+..++++||+.|.+.. .-...|..+. ..++++++.+++|+.+ +++.-+. ++++.+.++|||
T Consensus 35 ~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~~ipv~v-------~ggI~~~-------~~~~~~l~~Gad 99 (244)
T 1vzw_A 35 LEAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAMDIKVEL-------SGGIRDD-------DTLAAALATGCT 99 (244)
T ss_dssp HHHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHCSSEEEE-------ESSCCSH-------HHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhcCCcEEE-------ECCcCCH-------HHHHHHHHcCCC
Confidence 3556778899999999975 1122233344 8899999999999865 1233343 357778889999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
+|++|.-.- -|.+.+.++++..
T Consensus 100 ~V~lg~~~l---~~p~~~~~~~~~~ 121 (244)
T 1vzw_A 100 RVNLGTAAL---ETPEWVAKVIAEH 121 (244)
T ss_dssp EEEECHHHH---HCHHHHHHHHHHH
T ss_pred EEEECchHh---hCHHHHHHHHHHc
Confidence 999996321 1245566666653
No 53
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=95.80 E-value=0.058 Score=41.80 Aligned_cols=89 Identities=22% Similarity=0.211 Sum_probs=65.4
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCC--CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLT--PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlT--PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+.+..+++.|++.|=.++ ....|.+ |...+++++++.+++||.+- ||= .+. +|+..+++.|+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~-~~~~g~~~g~~~~~i~~l~~~~~ipvia~-----GGI--~~~-------~d~~~~~~~Ga 219 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTS-MDRDGTKEGYDLRLTRMVAEAVGVPVIAS-----GGA--GRM-------EHFLEAFQAGA 219 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEE-TTTTTTCSCCCHHHHHHHHHHCSSCEEEE-----SCC--CSH-------HHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEec-ccCCCCcCCCCHHHHHHHHHHcCCCEEEe-----CCC--CCH-------HHHHHHHHCCC
Confidence 6778999999999987764 2333433 56999999999999998652 442 222 56777778899
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
||+++|=-=-.+.+|.....+.+..+
T Consensus 220 dgv~vgsal~~~~~~~~~~~~~l~~~ 245 (252)
T 1ka9_F 220 EAALAASVFHFGEIPIPKLKRYLAEK 245 (252)
T ss_dssp SEEEESHHHHTTSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 99999965556778888887776644
No 54
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=95.79 E-value=0.18 Score=40.08 Aligned_cols=109 Identities=11% Similarity=0.092 Sum_probs=74.0
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC-CcEEEEE--ccCCCCCcccCHHHHHH----HHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL-VPVFVMI--RVRAGFDFVFSQAEKEI----MALDC 88 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~-ipv~vMI--RP~R~gdF~Ys~~E~~~----M~~dI 88 (146)
+.|.+++....+.||+|+-+.+..- -...+++++.+..+ =.+.+-| +- ..+.++|++.=.+. ..+-+
T Consensus 84 Irs~e~~~~~l~~GadkVii~t~a~-----~~p~li~e~~~~~g~q~iv~~iD~~~-~~~~~v~~~gw~~~~~~~~~~~~ 157 (243)
T 4gj1_A 84 IRSKEEVKALLDCGVKRVVIGSMAI-----KDATLCLEILKEFGSEAIVLALDTIL-KEDYVVAVNAWQEASDKKLMEVL 157 (243)
T ss_dssp CCCHHHHHHHHHTTCSEEEECTTTT-----TCHHHHHHHHHHHCTTTEEEEEEEEE-SSSEEEC--------CCBHHHHH
T ss_pred cccHHHHHHHHHcCCCEEEEccccc-----cCCchHHHHHhcccCceEEEEEEEEe-CCCCEEEecCceecccchHHHHH
Confidence 3588999999999999999997532 35778877776553 2233333 33 34446665532221 34567
Q ss_pred HHHHHcCCCEEEEeeecCCCC---cCHHHHHHHHHHhCCCCeEEe
Q psy7930 89 HQFVESGADGFVIGALTGEQE---IDIEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~dg~---iD~~~~~~Li~~a~~~~vtFH 130 (146)
+.+.+.|+..|++=-++.||+ +|.+.++++.+...+.|++..
T Consensus 158 ~~~~~~g~~eil~t~Id~DGt~~G~d~~l~~~l~~~~~~ipvias 202 (243)
T 4gj1_A 158 DFYSNKGLKHILCTDISKDGTMQGVNVRLYKLIHEIFPNICIQAS 202 (243)
T ss_dssp HHHHTTTCCEEEEEETTC-----CCCHHHHHHHHHHCTTSEEEEE
T ss_pred HHHhhcCCcEEEeeeecccccccCCCHHHHHHHHHhcCCCCEEEE
Confidence 788899999999999999985 899999999888777887754
No 55
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.79 E-value=0.085 Score=40.20 Aligned_cols=70 Identities=24% Similarity=0.271 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCC--CCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRA--GFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R--~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+=+..++++|++.+++. +...++.+++.+++|+...++. . ++.+..++. .++++.+.+.|+|
T Consensus 27 ~~a~~~~~~Ga~~i~~~----------~~~~i~~i~~~~~~pv~~~~~~-~~~~~~~~i~~~-----~~~i~~~~~~Gad 90 (223)
T 1y0e_A 27 KMALAAYEGGAVGIRAN----------TKEDILAIKETVDLPVIGIVKR-DYDHSDVFITAT-----SKEVDELIESQCE 90 (223)
T ss_dssp HHHHHHHHHTCSEEEEE----------SHHHHHHHHHHCCSCEEEECBC-CCTTCCCCBSCS-----HHHHHHHHHHTCS
T ss_pred HHHHHHHHCCCeeeccC----------CHHHHHHHHHhcCCCEEeeecc-CCCccccccCCc-----HHHHHHHHhCCCC
Confidence 44566788999999873 4688999999999999544443 2 344433321 2456778899999
Q ss_pred EEEEeeec
Q psy7930 98 GFVIGALT 105 (146)
Q Consensus 98 G~VfG~L~ 105 (146)
.++++...
T Consensus 91 ~v~l~~~~ 98 (223)
T 1y0e_A 91 VIALDATL 98 (223)
T ss_dssp EEEEECSC
T ss_pred EEEEeeec
Confidence 99999754
No 56
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.78 E-value=0.033 Score=44.90 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=54.0
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCC--------------------CCCCCC------------CHHHHHHHHhhCCCcEE
Q psy7930 16 VDSVASALAAVRGGADRLELCAALS--------------------EGGLTP------------TLGLYRVIKRLVLVPVF 63 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~--------------------~GGlTP------------S~g~i~~~~~~~~ipv~ 63 (146)
+.|++++..+.+.|||.|-....-. .+|+|| +...++++++..++|+.
T Consensus 132 v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi 211 (297)
T 2zbt_A 132 ARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVV 211 (297)
T ss_dssp ESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSC
T ss_pred cCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcE
Confidence 7899999999999999985542100 124444 45778888888888864
Q ss_pred EEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 64 VMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 64 vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+ =. -|| - .|. +|+..+.++|||||++|=
T Consensus 212 ~--~a-~GG-I-~~~-------e~i~~~~~aGadgvvvGs 239 (297)
T 2zbt_A 212 N--FA-AGG-I-ATP-------ADAALMMHLGMDGVFVGS 239 (297)
T ss_dssp E--EB-CSS-C-CSH-------HHHHHHHHTTCSEEEECG
T ss_pred E--Ee-eCC-C-CCH-------HHHHHHHHcCCCEEEEch
Confidence 2 25 455 2 233 578888899999999993
No 57
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.74 E-value=0.096 Score=39.79 Aligned_cols=89 Identities=20% Similarity=0.191 Sum_probs=61.3
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
..+.+..+.+.||+.|=+.+- ..+| ..|....++++++..++||.+ -||=. +. +|+..+.+.|
T Consensus 156 ~~e~~~~~~~~G~d~i~~~~~-~~~g~~~~~~~~~i~~l~~~~~~pvia-----~GGi~--~~-------~~~~~~~~~G 220 (253)
T 1h5y_A 156 AVKWAKEVEELGAGEILLTSI-DRDGTGLGYDVELIRRVADSVRIPVIA-----SGGAG--RV-------EHFYEAAAAG 220 (253)
T ss_dssp HHHHHHHHHHHTCSEEEEEET-TTTTTCSCCCHHHHHHHHHHCSSCEEE-----ESCCC--SH-------HHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEEecc-cCCCCcCcCCHHHHHHHHHhcCCCEEE-----eCCCC--CH-------HHHHHHHHcC
Confidence 456688899999999987642 2233 356788999999988888754 24422 22 4566677899
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHH
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~ 121 (146)
|||+++|=-=-.+..+.+.+.+.++.
T Consensus 221 a~~v~vgsal~~~~~~~~~~~~~l~~ 246 (253)
T 1h5y_A 221 ADAVLAASLFHFRVLSIAQVKRYLKE 246 (253)
T ss_dssp CSEEEESHHHHTTSSCHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 99999995222345777777776653
No 58
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=95.73 E-value=0.01 Score=48.42 Aligned_cols=78 Identities=23% Similarity=0.316 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCCEEEecCCCC-----------------CCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHH
Q psy7930 19 VASALAAVRGGADRLELCAALS-----------------EGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQA 79 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~-----------------~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~ 79 (146)
.+.+...+++ ||=|||---++ ..|+|.. +..++++++..++||.+|... . .-|.|.
T Consensus 33 ~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~-n-~v~~~g-- 107 (271)
T 1ujp_A 33 LQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYL-N-PVLAWG-- 107 (271)
T ss_dssp HHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCH-H-HHHHHC--
T ss_pred HHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecC-c-HHHHhh--
Confidence 3455566677 99999965433 3567765 578999998889999999433 1 123333
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeec
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGALT 105 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L~ 105 (146)
..+.++.+++.|+||+++.-|.
T Consensus 108 ----~~~f~~~~~~aG~dGviv~Dl~ 129 (271)
T 1ujp_A 108 ----PERFFGLFKQAGATGVILPDLP 129 (271)
T ss_dssp ----HHHHHHHHHHHTCCEEECTTCC
T ss_pred ----HHHHHHHHHHcCCCEEEecCCC
Confidence 3566788999999999886554
No 59
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.68 E-value=0.079 Score=43.99 Aligned_cols=95 Identities=18% Similarity=0.309 Sum_probs=64.6
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCC-------------------------C-------CCCCHHHHHHHHhhCCCc
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEG-------------------------G-------LTPTLGLYRVIKRLVLVP 61 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~G-------------------------G-------lTPS~g~i~~~~~~~~ip 61 (146)
+++.|.+++..|.+.||+-|=....-..| + +.|+..+++++++..++|
T Consensus 130 v~v~~~~Ea~~a~~~Gad~I~v~g~~gTG~~~~~v~h~~~~~~eir~l~~~~~d~L~t~~~~~~~~~~ll~~i~~~~~iP 209 (297)
T 4adt_A 130 CGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLDESEVYNFAKKLRAPIDLILLTRKLKRLP 209 (297)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECCCTTSCCCHHHHHHHHHHHHHHHHHHHSCTTTHHHHHHHHTCCHHHHHHHHHHTSCS
T ss_pred EEeCCHHHHHHHHhCCCCEEEECCCcCCCchHHHHHHHHHhhhhhhhhccccccccccccccCCCCHHHHHHHHHhcCCC
Confidence 35899999999999999987666320111 1 267889999999988899
Q ss_pred EEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe-eecCCCCcCH-HHHHHHHHHh
Q psy7930 62 VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIG-ALTGEQEIDI-EFIRQLKTII 122 (146)
Q Consensus 62 v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG-~L~~dg~iD~-~~~~~Li~~a 122 (146)
|.+.. -|| . .|. +|+..+.++|||||++| .|.... |. ..+++|+++.
T Consensus 210 VivvA---~GG-I-~t~-------~dv~~~~~~GAdgVlVGsai~~a~--dp~~~~~~l~~ai 258 (297)
T 4adt_A 210 VVNFA---AGG-I-ATP-------ADAAMCMQLGMDGVFVGSGIFESE--NPQKMASSIVMAV 258 (297)
T ss_dssp SEEEE---ESC-C-CSH-------HHHHHHHHTTCSCEEESHHHHTSS--CHHHHHHHHHHHH
T ss_pred eEEEe---cCC-C-CCH-------HHHHHHHHcCCCEEEEhHHHHcCC--CHHHHHHHHHHHH
Confidence 75321 244 2 122 67888889999999998 333222 43 4566666654
No 60
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=95.67 E-value=0.019 Score=48.73 Aligned_cols=73 Identities=18% Similarity=0.155 Sum_probs=53.8
Q ss_pred ecCHHHHHHHHHcCCCEEEecCC--CCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAA--LSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~--l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+.+.+++..+.+.|||.|.+-.. ....|..|+...+.++++.+++||.+ -|| .. +. .|+..+..
T Consensus 233 v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~~~pVia-----~GG-I~-~~-------~dv~kal~ 298 (380)
T 1p4c_A 233 LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKTGKPVLI-----DSG-FR-RG-------SDIVKALA 298 (380)
T ss_dssp ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHHCSCEEE-----CSS-CC-SH-------HHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHcCCeEEE-----ECC-CC-CH-------HHHHHHHH
Confidence 47999999999999999999432 12223346788888888888887643 344 32 22 56667778
Q ss_pred cCCCEEEEe
Q psy7930 94 SGADGFVIG 102 (146)
Q Consensus 94 ~GadG~VfG 102 (146)
+|||+|.+|
T Consensus 299 ~GAdaV~iG 307 (380)
T 1p4c_A 299 LGAEAVLLG 307 (380)
T ss_dssp TTCSCEEES
T ss_pred hCCcHhheh
Confidence 999999998
No 61
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.67 E-value=0.025 Score=46.37 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCCEEEecCCC---C--------------CCCCCC--CHHHHHHHHhh-CCCcEEEEEccCCCCCcccCH
Q psy7930 19 VASALAAVRGGADRLELCAAL---S--------------EGGLTP--TLGLYRVIKRL-VLVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l---~--------------~GGlTP--S~g~i~~~~~~-~~ipv~vMIRP~R~gdF~Ys~ 78 (146)
.+-+...+++|||=|||---. - ..|+|. .+.+++++++. .++|+.+|.-- .. -|.|.-
T Consensus 37 ~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~-n~-v~~~g~ 114 (271)
T 3nav_A 37 LAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYA-NL-VYARGI 114 (271)
T ss_dssp HHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECH-HH-HHHTCH
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecC-cH-HHHHhH
Confidence 455666788999999998321 1 144554 25677888876 79999999632 00 344543
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEE
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITF 129 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtF 129 (146)
.+=++.++++|+||+++.=|. ++ ...++.+.++ ++...|
T Consensus 115 ------~~f~~~~~~aGvdGvIipDlp----~e--e~~~~~~~~~~~gl~~I~ 155 (271)
T 3nav_A 115 ------DDFYQRCQKAGVDSVLIADVP----TN--ESQPFVAAAEKFGIQPIF 155 (271)
T ss_dssp ------HHHHHHHHHHTCCEEEETTSC----GG--GCHHHHHHHHHTTCEEEE
T ss_pred ------HHHHHHHHHCCCCEEEECCCC----HH--HHHHHHHHHHHcCCeEEE
Confidence 344778899999999885333 32 2455555554 444433
No 62
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=95.66 E-value=0.012 Score=49.53 Aligned_cols=77 Identities=14% Similarity=0.199 Sum_probs=60.4
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
..+||=|+|++++..|.++|||.|=| +| .|.+.++++.+..+- ++.|-. .||= . .+.|+
T Consensus 208 ~kIeVEv~tl~e~~eAl~aGaDiImL-Dn-------~s~~~l~~av~~~~~--~v~lea-SGGI-t---------~~~i~ 266 (300)
T 3l0g_A 208 EYIAIECDNISQVEESLSNNVDMILL-DN-------MSISEIKKAVDIVNG--KSVLEV-SGCV-N---------IRNVR 266 (300)
T ss_dssp CCEEEEESSHHHHHHHHHTTCSEEEE-ES-------CCHHHHHHHHHHHTT--SSEEEE-ESSC-C---------TTTHH
T ss_pred CCEEEEECCHHHHHHHHHcCCCEEEE-CC-------CCHHHHHHHHHhhcC--ceEEEE-ECCC-C---------HHHHH
Confidence 57899999999999999999999977 33 567899988876542 344555 4552 1 35688
Q ss_pred HHHHcCCCEEEEeeecCC
Q psy7930 90 QFVESGADGFVIGALTGE 107 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~d 107 (146)
.+.+.|+|.|++|.|+.+
T Consensus 267 ~~A~tGVD~IsvGalths 284 (300)
T 3l0g_A 267 NIALTGVDYISIGCITNS 284 (300)
T ss_dssp HHHTTTCSEEECGGGTSS
T ss_pred HHHHcCCCEEEeCccccC
Confidence 899999999999999964
No 63
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.64 E-value=0.012 Score=44.63 Aligned_cols=94 Identities=18% Similarity=0.290 Sum_probs=58.1
Q ss_pred ceeE-EEecCH-HHHHHHHHcCCCEEEecCCCCCCCCC---CCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 10 TTLE-VCVDSV-ASALAAVRGGADRLELCAALSEGGLT---PTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 10 ~~lE-vcv~s~-~~a~~A~~~GAdRIELc~~l~~GGlT---PS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
+++| ++..++ +.+..+.+.|+|.|-+.. ..+|.+ .+...++++++.. ++||.+- || - +.
T Consensus 106 ~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~--g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~-----gG-I--~~----- 170 (211)
T 3f4w_A 106 VVVDMICVDDLPARVRLLEEAGADMLAVHT--GTDQQAAGRKPIDDLITMLKVRRKARIAVA-----GG-I--SS----- 170 (211)
T ss_dssp EEEECTTCSSHHHHHHHHHHHTCCEEEEEC--CHHHHHTTCCSHHHHHHHHHHCSSCEEEEE-----SS-C--CT-----
T ss_pred EEEEecCCCCHHHHHHHHHHcCCCEEEEcC--CCcccccCCCCHHHHHHHHHHcCCCcEEEE-----CC-C--CH-----
Confidence 3444 234454 668999999999974432 112221 2578899988876 7777542 22 2 11
Q ss_pred HHHHHHHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHHH
Q psy7930 84 MALDCHQFVESGADGFVIG-ALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~~ 121 (146)
+++..+.++|+||+|+| ++..... -.+++++|.+.
T Consensus 171 --~~~~~~~~~Gad~vvvGsai~~~~d-~~~~~~~l~~~ 206 (211)
T 3f4w_A 171 --QTVKDYALLGPDVVIVGSAITHAAD-PAGEARKISQV 206 (211)
T ss_dssp --TTHHHHHTTCCSEEEECHHHHTCSS-HHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCEEEECHHHcCCCC-HHHHHHHHHHH
Confidence 38888999999999999 4443322 13455666554
No 64
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=95.53 E-value=0.051 Score=45.58 Aligned_cols=77 Identities=23% Similarity=0.343 Sum_probs=55.0
Q ss_pred EEecCHHHHHHHHHcCCCEEEecC-------------------------CCC-CC-------CCCCCHHHHHHHHhhCCC
Q psy7930 14 VCVDSVASALAAVRGGADRLELCA-------------------------ALS-EG-------GLTPTLGLYRVIKRLVLV 60 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~-------------------------~l~-~G-------GlTPS~g~i~~~~~~~~i 60 (146)
.=+.|+++|+.+.+.||+=|=--. +|. .. =+.|++.+++++++..++
T Consensus 120 ~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~I 199 (291)
T 3o07_A 120 CGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKL 199 (291)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSC
T ss_pred eeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHHHHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCC
Confidence 347899999999999999988531 221 10 136889999999999999
Q ss_pred cEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 61 PVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 61 pv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
||.+. - -|| ..|++ |+..+.++|+|||++|
T Consensus 200 PVV~I--A-nGG--I~Tpe-------dA~~~le~GaDGVmVG 229 (291)
T 3o07_A 200 PVVNF--A-AGG--VATPA-------DAALLMQLGCDGVFVG 229 (291)
T ss_dssp SSCEE--B-CSS--CCSHH-------HHHHHHHTTCSCEEEC
T ss_pred CEEEe--c-CCC--CCCHH-------HHHHHHHhCCCEEEEc
Confidence 98543 1 233 23344 4555567999999998
No 65
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=95.51 E-value=0.05 Score=44.67 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=61.5
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
|++.|.+++..|.+.|++-|=.+. -....++|+......+.+.+ ++|+.. = +| .+|. +|++.+
T Consensus 174 vevh~~eEl~~A~~~ga~iIGinn-r~l~t~~~dl~~~~~L~~~ip~~~~vIa---e--sG--I~t~-------edv~~l 238 (272)
T 3tsm_A 174 IEVHDEAEMERALKLSSRLLGVNN-RNLRSFEVNLAVSERLAKMAPSDRLLVG---E--SG--IFTH-------EDCLRL 238 (272)
T ss_dssp EEECSHHHHHHHTTSCCSEEEEEC-BCTTTCCBCTHHHHHHHHHSCTTSEEEE---E--SS--CCSH-------HHHHHH
T ss_pred EEeCCHHHHHHHHhcCCCEEEECC-CCCccCCCChHHHHHHHHhCCCCCcEEE---E--CC--CCCH-------HHHHHH
Confidence 677999999999999999997773 23355678888888887766 344332 2 34 3344 456667
Q ss_pred HHcCCCEEEEee-ecCCCCcCHHHHHHHHH
Q psy7930 92 VESGADGFVIGA-LTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 92 ~~~GadG~VfG~-L~~dg~iD~~~~~~Li~ 120 (146)
+++|+|||++|= |..... -..++++|+.
T Consensus 239 ~~~Ga~gvLVG~almr~~d-~~~~~~~l~~ 267 (272)
T 3tsm_A 239 EKSGIGTFLIGESLMRQHD-VAAATRALLT 267 (272)
T ss_dssp HTTTCCEEEECHHHHTSSC-HHHHHHHHHH
T ss_pred HHcCCCEEEEcHHHcCCcC-HHHHHHHHHh
Confidence 899999999992 333322 2345555554
No 66
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=95.47 E-value=0.092 Score=46.57 Aligned_cols=92 Identities=15% Similarity=0.114 Sum_probs=68.9
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCC--CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGL--TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGl--TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
.+..+-+..+++.||+.| |+.+....|+ -|...+++++++.+++||.. .|| +.|.+ |++.+++
T Consensus 452 ~~~~e~a~~~~~~Ga~~i-l~t~~~~dG~~~G~d~~li~~l~~~~~iPVIa-----sGG--i~s~~-------d~~~~~~ 516 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEI-LLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA-----SSG--AGVPE-------HFEEAFL 516 (555)
T ss_dssp EEHHHHHHHHHHTTCCEE-EECCGGGTTTCSCCCHHHHHHHHHHCSSCEEE-----CSC--CCSHH-------HHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEE-EEeCCCCCCCCCCCCHHHHHHHHHhCCccEEE-----ECC--CCCHH-------HHHHHHH
Confidence 345788999999999999 5555554443 37899999999999999854 365 33444 4455554
Q ss_pred -cCCCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 94 -SGADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 94 -~GadG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
.|++|+++|=.--.+.++...+++.+...
T Consensus 517 ~~G~~gvivg~a~~~~~~~~~e~~~~l~~~ 546 (555)
T 1jvn_A 517 KTRADACLGAGMFHRGEFTVNDVKEYLLEH 546 (555)
T ss_dssp HSCCSEEEESHHHHTTSCCHHHHHHHHHHT
T ss_pred hcCChHHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 79999999976667899999988877654
No 67
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=95.46 E-value=0.057 Score=42.00 Aligned_cols=86 Identities=16% Similarity=0.071 Sum_probs=59.4
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+.|++++..|.+.|||-|-+-..-..|| ...++.+++.. ++|+. | -||= . .+++..+.++
T Consensus 111 ~~t~~e~~~A~~~Gad~v~~fpa~~~gG----~~~lk~l~~~~~~ipvv----a-iGGI-~---------~~n~~~~l~a 171 (207)
T 2yw3_A 111 VLTPTEVERALALGLSALKFFPAEPFQG----VRVLRAYAEVFPEVRFL----P-TGGI-K---------EEHLPHYAAL 171 (207)
T ss_dssp ECSHHHHHHHHHTTCCEEEETTTTTTTH----HHHHHHHHHHCTTCEEE----E-BSSC-C---------GGGHHHHHTC
T ss_pred CCCHHHHHHHHHCCCCEEEEecCccccC----HHHHHHHHhhCCCCcEE----E-eCCC-C---------HHHHHHHHhC
Confidence 6789999999999999998832111223 46788888877 78864 5 5662 1 1478889999
Q ss_pred CCCEEEEee-ecCCCCcC----HHHHHHHHHHhC
Q psy7930 95 GADGFVIGA-LTGEQEID----IEFIRQLKTIIG 123 (146)
Q Consensus 95 GadG~VfG~-L~~dg~iD----~~~~~~Li~~a~ 123 (146)
|++|+++|- +.. =| .++.+++++..+
T Consensus 172 Ga~~vavgSai~~---~d~~~i~~~a~~~~~~~~ 202 (207)
T 2yw3_A 172 PNLLAVGGSWLLQ---GNLEAVRAKVRAAKALLS 202 (207)
T ss_dssp SSBSCEEESGGGS---SCHHHHHHHHHHHHHHC-
T ss_pred CCcEEEEehhhhC---CCHHHHHHHHHHHHHHhc
Confidence 999999884 665 34 344555555443
No 68
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=95.40 E-value=0.083 Score=41.68 Aligned_cols=105 Identities=15% Similarity=-0.031 Sum_probs=70.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCC---CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccC----HHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGG---LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFS----QAEKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GG---lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys----~~E~~~M~~dI~~~~ 92 (146)
+.+..|.+.|.+-|||...-. .. .......+++..+..++.+..+- | .++|.-+ ...++.+++.|+.++
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~~l~~~gl~i~~~~-~--~~~~~~~~~~~~~~~~~~~~~i~~A~ 115 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENY-VDALAAGLTDEDMLRILDEHNMKVTEVE-Y--ITQWGTAEDRTAEQQKKEQTTFHMAR 115 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHH-HHHHHTTCCHHHHHHHHHHTTCEEEEEE-C--BCCCSSTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCHHHH-HHHHhcCCcHHHHHHHHHHcCCceEeeh-h--hhccccCChHHHHHHHHHHHHHHHHH
Confidence 346778899999999975210 00 11245667777777888877653 3 2344211 123678899999999
Q ss_pred HcCCCEEEEeeecCCCCcC----HHHHHHHHHHhCCCCeEEee
Q psy7930 93 ESGADGFVIGALTGEQEID----IEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 93 ~~GadG~VfG~L~~dg~iD----~~~~~~Li~~a~~~~vtFHR 131 (146)
++|++-+++|.. +..+ .+.++++.+.|.|+.+.+|=
T Consensus 116 ~lGa~~v~~g~~---~~~~~~~~~~~l~~l~~~a~Gv~l~lE~ 155 (296)
T 2g0w_A 116 LFGVKHINCGLL---EKIPEEQIIVALGELCDRAEELIIGLEF 155 (296)
T ss_dssp HHTCCEEEECCC---SCCCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HcCCCEEEEcCC---CCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 999999999876 2233 45567777777778887773
No 69
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=95.38 E-value=0.066 Score=41.21 Aligned_cols=98 Identities=10% Similarity=-0.062 Sum_probs=65.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+.+..+.+.|.+-|||...--..+.+|. ...++...+..++.+..+=-+ .. ..++.+++-|+.++++|++-
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~-------~~~~~~~~~i~~A~~lGa~~ 105 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YM-------KSEEEIDRAFDYAKRVGVKL 105 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EE-------CSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-cc-------CCHHHHHHHHHHHHHhCCCE
Confidence 4456788899999999975111222321 234455555668887755333 11 34778899999999999999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+|+- +. .+.++++.+.|+ |+.+.+|=-
T Consensus 106 v~~~---p~----~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 106 IVGV---PN----YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEEE---EC----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred EEec---CC----HHHHHHHHHHHHHcCCEEEEecC
Confidence 9973 21 467788888776 677777753
No 70
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=95.36 E-value=0.069 Score=44.29 Aligned_cols=80 Identities=19% Similarity=0.099 Sum_probs=58.8
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHh-hCC-CcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKR-LVL-VPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~-~~~-ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
..+-+|.+|+.-+...++.|++=|+=-..+--+|.-. ...+++.+++ ..+ +||.+ - || ..++ +
T Consensus 126 ~Vlpy~~~D~~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~---~--GG--I~tp-------s 191 (268)
T 2htm_A 126 LVLPYMGPDLVLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV---D--AG--LGLP-------S 191 (268)
T ss_dssp EECCEECSCHHHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE---E--SC--CCSH-------H
T ss_pred EEeeccCCCHHHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE---e--CC--CCCH-------H
Confidence 3457899999999999999999997766543334211 3667899988 677 99765 2 33 3333 5
Q ss_pred HHHHHHHcCCCEEEEee
Q psy7930 87 DCHQFVESGADGFVIGA 103 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~ 103 (146)
|+..+.++|+|||++|=
T Consensus 192 DAa~AmeLGAdgVlVgS 208 (268)
T 2htm_A 192 HAAEVMELGLDAVLVNT 208 (268)
T ss_dssp HHHHHHHTTCCEEEESH
T ss_pred HHHHHHHcCCCEEEECh
Confidence 67778899999999984
No 71
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.35 E-value=0.026 Score=45.12 Aligned_cols=80 Identities=21% Similarity=0.309 Sum_probs=51.8
Q ss_pred eeEEEecCHHHHHHHH----H-cCCCEEEecCC---CCCCCC----CCC--HHHHHHHHhhCCCcEEEEEccCCCCCccc
Q psy7930 11 TLEVCVDSVASALAAV----R-GGADRLELCAA---LSEGGL----TPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVF 76 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~----~-~GAdRIELc~~---l~~GGl----TPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y 76 (146)
.+-+...++++...+. + .|+|.|||+-+ ...||. .|. ..+++.+++.+++||.|.++| -- .
T Consensus 102 ~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~-~~----~ 176 (311)
T 1ep3_A 102 IANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSP-NV----T 176 (311)
T ss_dssp EEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECS-CS----S
T ss_pred EEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECC-Ch----H
Confidence 4556555665544433 4 89999999632 112333 221 567778888789999999998 22 2
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEE
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~Vf 101 (146)
+..| -++.+.++|+|+|++
T Consensus 177 ~~~~------~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 177 DIVP------IAKAVEAAGADGLTM 195 (311)
T ss_dssp CSHH------HHHHHHHTTCSEEEE
T ss_pred HHHH------HHHHHHHcCCCEEEE
Confidence 2222 256778899999998
No 72
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=95.35 E-value=0.35 Score=37.13 Aligned_cols=110 Identities=8% Similarity=0.024 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCCEEEecCCCCCC--CCCCCHHHHHHH---HhhCCCcE--EEEEccCCCCCcccCH-----HHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEG--GLTPTLGLYRVI---KRLVLVPV--FVMIRVRAGFDFVFSQ-----AEKEIMALD 87 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~G--GlTPS~g~i~~~---~~~~~ipv--~vMIRP~R~gdF~Ys~-----~E~~~M~~d 87 (146)
+.+..|.+.|.+-|||...-... ....+...++++ .+..++.+ ..+--| -..++.-.+ .-++.+++.
T Consensus 16 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~-~~~~~~~~~~~~r~~~~~~~~~~ 94 (287)
T 2x7v_A 16 RVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSG-YLINLASPKDDIWQKSVELLKKE 94 (287)
T ss_dssp GHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECC-TTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecc-cccccCCCCHHHHHHHHHHHHHH
Confidence 45677889999999997421111 111233444444 44457774 333335 323333222 236788999
Q ss_pred HHHHHHcCCCEEEE--eeecCCCCcC------HHHHHHHHHHhCCCCeEEee
Q psy7930 88 CHQFVESGADGFVI--GALTGEQEID------IEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 88 I~~~~~~GadG~Vf--G~L~~dg~iD------~~~~~~Li~~a~~~~vtFHR 131 (146)
|+.++++|++.+|+ |.-... .-+ .+.++++.+.+.|+.+.+|=
T Consensus 95 i~~A~~lG~~~v~~~~g~~~~~-~~~~~~~~~~~~l~~l~~~~~gv~l~lEn 145 (287)
T 2x7v_A 95 VEICRKLGIRYLNIHPGSHLGT-GEEEGIDRIVRGLNEVLNNTEGVVILLEN 145 (287)
T ss_dssp HHHHHHHTCCEEEECCEECTTS-CHHHHHHHHHHHHHHHHTTCCSCEEEEEC
T ss_pred HHHHHHcCCCEEEEecCCCCCC-CHHHHHHHHHHHHHHHHcccCCCEEEEeC
Confidence 99999999999998 543211 111 23455555544677777764
No 73
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=95.32 E-value=0.059 Score=44.72 Aligned_cols=73 Identities=29% Similarity=0.307 Sum_probs=56.6
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC--CcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL--VPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~--ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
.+||-++|++++..|.+.|||.|=|-+ .+...++++++.++ +||. - -|| . + .+.|
T Consensus 210 kI~vev~tlee~~eA~~aGaD~I~ld~--------~~~e~l~~~v~~~~~~~~I~----A-SGG-I--t-------~~~i 266 (296)
T 1qap_A 210 PVEVEVENLDELDDALKAGADIIMLDN--------FNTDQMREAVKRVNGQARLE----V-SGN-V--T-------AETL 266 (296)
T ss_dssp CEEEEESSHHHHHHHHHTTCSEEEESS--------CCHHHHHHHHHTTCTTCCEE----E-CCC-S--C-------HHHH
T ss_pred cEEEEeCCHHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhCCCCeEE----E-ECC-C--C-------HHHH
Confidence 678888999999999999999999843 67788888887663 4443 3 455 3 2 3567
Q ss_pred HHHHHcCCCEEEEeeecC
Q psy7930 89 HQFVESGADGFVIGALTG 106 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~ 106 (146)
+.+.+.|+|+|.+|.|+.
T Consensus 267 ~~~a~~GvD~isvGsli~ 284 (296)
T 1qap_A 267 REFAETGVDFISVGALTK 284 (296)
T ss_dssp HHHHHTTCSEEECSHHHH
T ss_pred HHHHHcCCCEEEEeHHHc
Confidence 888999999999998763
No 74
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.30 E-value=0.15 Score=40.93 Aligned_cols=70 Identities=20% Similarity=0.257 Sum_probs=54.3
Q ss_pred ecCHHHHHHHHHcCCCEEEecCC-----CCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAA-----LSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~-----l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+...+-+..+.++||+.|++... -..|| +..+...++++++.+++|+.+-+++ + + .+++
T Consensus 28 ~~~~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~-~------~-------~~~~ 93 (297)
T 2zbt_A 28 VTTPEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRI-G------H-------FVEA 93 (297)
T ss_dssp ESSHHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEET-T------C-------HHHH
T ss_pred echHHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEecc-C------C-------HHHH
Confidence 34588899999999999998421 12356 4457889999999999999887788 3 1 3567
Q ss_pred HHHHHcCCCEE
Q psy7930 89 HQFVESGADGF 99 (146)
Q Consensus 89 ~~~~~~GadG~ 99 (146)
+.+.++|||++
T Consensus 94 ~~~~~aGad~v 104 (297)
T 2zbt_A 94 MILEAIGVDFI 104 (297)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHCCCCEE
Confidence 78889999999
No 75
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=95.29 E-value=0.05 Score=44.97 Aligned_cols=82 Identities=22% Similarity=0.185 Sum_probs=57.3
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCC-cEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLV-PVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~i-pv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
.+||=++|++++..|.+.|||.|-|= + .+...++++++.++- ..++.|-- .|| .. .+.|+
T Consensus 196 ~I~Vev~t~eea~eal~aGaD~I~LD-n-------~~~~~~~~~v~~l~~~~~~v~iea-SGG-It---------~~~i~ 256 (284)
T 1qpo_A 196 PCEVEVDSLEQLDAVLPEKPELILLD-N-------FAVWQTQTAVQRRDSRAPTVMLES-SGG-LS---------LQTAA 256 (284)
T ss_dssp CEEEEESSHHHHHHHGGGCCSEEEEE-T-------CCHHHHHHHHHHHHHHCTTCEEEE-ESS-CC---------TTTHH
T ss_pred CEEEEeCCHHHHHHHHHcCCCEEEEC-C-------CCHHHHHHHHHHhhccCCCeEEEE-ECC-CC---------HHHHH
Confidence 78888899999999999999977654 3 355777776665321 01123333 344 42 25688
Q ss_pred HHHHcCCCEEEEeeecCCCC-cC
Q psy7930 90 QFVESGADGFVIGALTGEQE-ID 111 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg~-iD 111 (146)
.+.+.|+|+|++|.++..-. +|
T Consensus 257 ~~a~tGVD~isvG~l~~~a~~~D 279 (284)
T 1qpo_A 257 TYAETGVDYLAVGALTHSVRVLD 279 (284)
T ss_dssp HHHHTTCSEEECGGGTSSBCCCC
T ss_pred HHHhcCCCEEEECHHHcCCCCcc
Confidence 89999999999999887543 55
No 76
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.29 E-value=0.087 Score=44.50 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=60.7
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
..+.+..+.+.|+|-|||... .| .| ....++.+++.+ ++||.+ + .+.+. ++++.+.++
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~--~g--~~~~~~e~i~~ir~~~~~~pviv---~-----~v~~~-------~~a~~a~~~ 214 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSA--HG--HSTRIIELIKKIKTKYPNLDLIA---G-----NIVTK-------EAALDLISV 214 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCS--CC--SSHHHHHHHHHHHHHCTTCEEEE---E-----EECSH-------HHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEEeCC--CC--ChHHHHHHHHHHHHHCCCCeEEE---c-----CCCcH-------HHHHHHHhc
Confidence 457777888999999999532 22 45 356778888887 788866 3 33343 466778889
Q ss_pred CCCEEEEee----------ecCCCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 95 GADGFVIGA----------LTGEQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 95 GadG~VfG~----------L~~dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
|+|+|++|. ....|.-+.+.+.++.+.++ ++|+.
T Consensus 215 Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVi 260 (404)
T 1eep_A 215 GADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICII 260 (404)
T ss_dssp TCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEE
Confidence 999999963 01123335667777777655 44443
No 77
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=95.28 E-value=0.33 Score=37.26 Aligned_cols=110 Identities=8% Similarity=-0.022 Sum_probs=62.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCC---CCCHHH---HHHHHhhCCCcE--EEEEccCCCCCcccCHH-----HHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGL---TPTLGL---YRVIKRLVLVPV--FVMIRVRAGFDFVFSQA-----EKEIMAL 86 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGl---TPS~g~---i~~~~~~~~ipv--~vMIRP~R~gdF~Ys~~-----E~~~M~~ 86 (146)
+.+..|.+.|.+-|||... ..... ..+... +++..+..++++ ..+--| -..++.-.+. -++.+++
T Consensus 16 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-~~~~l~~~~~~~r~~~~~~~~~ 93 (285)
T 1qtw_A 16 NAAIRAAEIDATAFALFTK-NQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDS-YLINLGHPVTEALEKSRDAFID 93 (285)
T ss_dssp HHHHHHHHTTCSEEECCSS-CSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCC-TTCCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeCC-CCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCC-cccccCCCCHHHHHHHHHHHHH
Confidence 4456678899999999421 11111 123334 444445557764 222235 3334443222 3678899
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcCH--------HHHHHHHHHhCCCCeEEee
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEIDI--------EFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD~--------~~~~~Li~~a~~~~vtFHR 131 (146)
-|+.++++|++.+|+..=...+..+. +.++++.+...++.+.++-
T Consensus 94 ~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~a~~~gv~l~lEn 146 (285)
T 1qtw_A 94 EMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIEN 146 (285)
T ss_dssp HHHHHHHTTCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHhccCCCEEEEec
Confidence 99999999999999832111122222 3455665544677777764
No 78
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.28 E-value=0.07 Score=45.39 Aligned_cols=72 Identities=21% Similarity=0.336 Sum_probs=53.3
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCCC----------CCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGGL----------TPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GGl----------TPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.+.+.+..+++.|||-|-+ ....|+. .|....+..+.+ ..++||.. -|| ..+.
T Consensus 156 ~v~t~e~A~~a~~aGAD~I~v--G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA-----~GG-I~~~---- 223 (366)
T 4fo4_A 156 NVATAEGARALIEAGVSAVKV--GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA-----DGG-IRFS---- 223 (366)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE-----ESC-CCSH----
T ss_pred eeCCHHHHHHHHHcCCCEEEE--ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEE-----eCC-CCCH----
Confidence 478999999999999999998 3344443 466777777765 45788753 244 3332
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
.||..+..+|||+|.+|
T Consensus 224 ----~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 224 ----GDISKAIAAGASCVMVG 240 (366)
T ss_dssp ----HHHHHHHHTTCSEEEES
T ss_pred ----HHHHHHHHcCCCEEEEC
Confidence 57888899999999999
No 79
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=95.28 E-value=0.43 Score=36.27 Aligned_cols=109 Identities=13% Similarity=0.010 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCCEEEec-CCCCCCC-CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcc-cCHH----HHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELC-AALSEGG-LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFV-FSQA----EKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc-~~l~~GG-lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~-Ys~~----E~~~M~~dI~~~~ 92 (146)
+.+..+.+.|.+-|||. ......= .......++...+..++.+..+=-| - +|. -++. -++.+++-|+.++
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~i~~a~ 94 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNAL-V--FFNNRDEKGHNEIITEFKGMMETCK 94 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEE-E--CCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccc-c--ccccCCHHHHHHHHHHHHHHHHHHH
Confidence 34567888999999998 4311000 0135566777777778887655444 2 444 2332 3778999999999
Q ss_pred HcCCCEEEEeeecCCCCcC--------HHHHHHHHHHhC--CCCeEEee
Q psy7930 93 ESGADGFVIGALTGEQEID--------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 93 ~~GadG~VfG~L~~dg~iD--------~~~~~~Li~~a~--~~~vtFHR 131 (146)
++|++-+|+-.-......+ .+.++++.+.|+ |+.+.+|=
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 143 (278)
T 1i60_A 95 TLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEF 143 (278)
T ss_dssp HHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred HcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 9999999983211111233 245566666665 67777764
No 80
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=95.25 E-value=0.069 Score=41.67 Aligned_cols=74 Identities=14% Similarity=0.041 Sum_probs=52.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSE-GGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~-GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+..+-+..+++.||+.|-+-+--.. .+.-+...+++++++.+++||.+. | ...|. +|++.+.+.|
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~------G-gi~~~-------~~~~~~l~~G 101 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS------G-GAGKM-------EHFLEAFLRG 101 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEE------S-CCCSH-------HHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEe------C-CCCCH-------HHHHHHHHcC
Confidence 4457788889999999987542112 234567899999999999998652 2 34454 4566667889
Q ss_pred CCEEEEeee
Q psy7930 96 ADGFVIGAL 104 (146)
Q Consensus 96 adG~VfG~L 104 (146)
||+|++|-.
T Consensus 102 ad~V~ig~~ 110 (247)
T 3tdn_A 102 ADKVSINTA 110 (247)
T ss_dssp CSEECCSHH
T ss_pred CCeeehhhH
Confidence 999999963
No 81
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.24 E-value=0.095 Score=39.92 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=59.1
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCC----CC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSE----GG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~----GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+=+-+.+.+++..+.+.|+|-|-+...-.. ++ ..|....++++++.+++||.+ -|| . .|.
T Consensus 122 v~~~~~t~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia-----~GG-I-~~~------- 187 (223)
T 1y0e_A 122 IMADIATVEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIA-----EGN-V-ITP------- 187 (223)
T ss_dssp EEEECSSHHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEE-----ESS-C-CSH-------
T ss_pred EEecCCCHHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEE-----ecC-C-CCH-------
Confidence 335677899999999999999865432111 11 223456788888888888765 344 2 122
Q ss_pred HHHHHHHHcCCCEEEEee-ecCCCCcCHHHHHHHHHH
Q psy7930 86 LDCHQFVESGADGFVIGA-LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~-L~~dg~iD~~~~~~Li~~ 121 (146)
+|+..+.++|||+|++|= |.. .....++|.++
T Consensus 188 ~~~~~~~~~Gad~v~vG~al~~----p~~~~~~~~~~ 220 (223)
T 1y0e_A 188 DMYKRVMDLGVHCSVVGGAITR----PKEITKRFVQV 220 (223)
T ss_dssp HHHHHHHHTTCSEEEECHHHHC----HHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEChHHcC----cHHHHHHHHHH
Confidence 567778889999999992 221 33455555543
No 82
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.24 E-value=0.094 Score=45.94 Aligned_cols=95 Identities=18% Similarity=0.201 Sum_probs=64.0
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
++.+.+..+.++|+|.|++..+- |-..-....++.+++.. ++||.+ +.+-+.+ +++.+.++|
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~--g~~~~~~~~i~~ir~~~p~~~Vi~--------g~v~t~e-------~a~~l~~aG 293 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSH--GHSEGVLQRIRETRAAYPHLEIIG--------GNVATAE-------GARALIEAG 293 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSC--TTSHHHHHHHHHHHHHCTTCCEEE--------EEECSHH-------HHHHHHHHT
T ss_pred chHHHHHHHHhccCceEEecccc--ccchHHHHHHHHHHHHCCCceEEE--------cccCcHH-------HHHHHHHhC
Confidence 45889999999999999998652 22112346788888877 788866 1333443 457778899
Q ss_pred CCEEEEee------ec----CCCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 96 ADGFVIGA------LT----GEQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 96 adG~VfG~------L~----~dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
||+|++|. -+ .-|.-+...+.++.++++ +.|+.
T Consensus 294 aD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVI 338 (496)
T 4fxs_A 294 VSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 338 (496)
T ss_dssp CSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred CCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEE
Confidence 99999973 11 123446677788888775 45543
No 83
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=95.24 E-value=0.12 Score=42.88 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=54.2
Q ss_pred EecCHHHHHHHHHcCCCEEEec-----CCCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELC-----AALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc-----~~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
=+++++.|..++++||+-|-.- ..-..|| -..++..++++++.+++||.+-.|. +| ..+
T Consensus 27 d~~~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i----~~----------ide 92 (297)
T 4adt_A 27 DVKNVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRI----GH----------FVE 92 (297)
T ss_dssp EESSHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEET----TC----------HHH
T ss_pred CCCcHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccC----Cc----------HHH
Confidence 3578899999999999998665 3334555 5679999999999999999887776 23 345
Q ss_pred HHHHHHcCCCEE
Q psy7930 88 CHQFVESGADGF 99 (146)
Q Consensus 88 I~~~~~~GadG~ 99 (146)
++.+.++|||.|
T Consensus 93 ~qil~aaGAD~I 104 (297)
T 4adt_A 93 AQILEELKVDML 104 (297)
T ss_dssp HHHHHHTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 566668999998
No 84
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=95.21 E-value=0.094 Score=40.46 Aligned_cols=112 Identities=14% Similarity=0.091 Sum_probs=64.6
Q ss_pred CHH-HHHHHHHcCCCEEEecCCCCCCCCC-CCHHHHHHHHhhCCCcEEEEEc-cCCCCCcccCHH-----HHHHHHHHHH
Q psy7930 18 SVA-SALAAVRGGADRLELCAALSEGGLT-PTLGLYRVIKRLVLVPVFVMIR-VRAGFDFVFSQA-----EKEIMALDCH 89 (146)
Q Consensus 18 s~~-~a~~A~~~GAdRIELc~~l~~GGlT-PS~g~i~~~~~~~~ipv~vMIR-P~R~gdF~Ys~~-----E~~~M~~dI~ 89 (146)
+++ .+..+.+.|.+-|||...-.. ..+ -...-++...+..++.+....- | ...++.-.+. -++.+++-|+
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~~~~l~~~gl~~~~~~~~~-~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFH-NLSDAKKRELKAVADDLGLTVMCCIGLK-SEYDFASPDKSVRDAGTEYVKRLLD 95 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGG-GSCHHHHHHHHHHHHHHTCEEEEEEEEC-GGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCEEEEecCCcc-ccchhhHHHHHHHHHHcCCceEEecCCC-CCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 344 456678899999999864211 111 1233444444556888776542 3 3334443222 2578999999
Q ss_pred HHHHcCCCEEEE------ee--ecCCCCcC------HHHHHHHHHHhC--CCCeEEee
Q psy7930 90 QFVESGADGFVI------GA--LTGEQEID------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 90 ~~~~~GadG~Vf------G~--L~~dg~iD------~~~~~~Li~~a~--~~~vtFHR 131 (146)
.++++|++-+|+ |. ..++..-+ .+.++++.+.|+ |+.+.+|=
T Consensus 96 ~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 153 (290)
T 2qul_A 96 DCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV 153 (290)
T ss_dssp HHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC
T ss_pred HHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 999999999884 21 11111111 234555555554 77788773
No 85
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=95.19 E-value=0.16 Score=39.39 Aligned_cols=109 Identities=11% Similarity=-0.037 Sum_probs=66.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHH---HHHHhhCCCcEEEEEccCCCCCcccCHH-----HHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLY---RVIKRLVLVPVFVMIRVRAGFDFVFSQA-----EKEIMALDCHQF 91 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i---~~~~~~~~ipv~vMIRP~R~gdF~Ys~~-----E~~~M~~dI~~~ 91 (146)
+.+..+.+.|.+-|||...- . ..++...+ +...+..++.+..+.-|....+|.-.+. -++.+++-|+.+
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~-~--~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 21 YYIEKVAKLGFDILEIAASP-L--PFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp HHHHHHHHHTCSEEEEESTT-G--GGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCcc-c--CCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45566788999999999642 1 12244444 4444556898888655412334443333 357888999999
Q ss_pred HHcCCCEEEEeeec-----CCCCcC--------HHHHHHHHHHhC--CCCeEEee
Q psy7930 92 VESGADGFVIGALT-----GEQEID--------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 92 ~~~GadG~VfG~L~-----~dg~iD--------~~~~~~Li~~a~--~~~vtFHR 131 (146)
+++|++.+++.+-. -.+..+ .+.++++.+.|+ |+.+.+|=
T Consensus 98 ~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 152 (294)
T 3vni_A 98 YKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEV 152 (294)
T ss_dssp HHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999998742211 122233 345566666664 67777773
No 86
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=95.15 E-value=0.082 Score=44.96 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=53.4
Q ss_pred cCHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
.+.++|..|++.|||-|-+-..- ...|-.|+...+.++++.+ ++||..- || ... . .|+..+.
T Consensus 226 ~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~-----GG-I~~-g-------~Dv~kaL 291 (352)
T 3sgz_A 226 LTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD-----GG-VRT-G-------TDVLKAL 291 (352)
T ss_dssp CSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE-----SS-CCS-H-------HHHHHHH
T ss_pred CcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE-----CC-CCC-H-------HHHHHHH
Confidence 78999999999999999986531 1223356788888888877 6887552 33 222 2 5788888
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
.+|||+|.+|
T Consensus 292 alGA~aV~iG 301 (352)
T 3sgz_A 292 ALGARCIFLG 301 (352)
T ss_dssp HTTCSEEEES
T ss_pred HcCCCEEEEC
Confidence 8999999998
No 87
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=95.13 E-value=0.22 Score=38.22 Aligned_cols=71 Identities=15% Similarity=0.209 Sum_probs=49.2
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCC----CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRGGADRLELCAALSEGG----LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GG----lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.+.+..+.++|+|-|||-- .-|- ++-....++++++.++.|+.+++- +.+.+ +.++.+.++
T Consensus 26 ~~~i~~~~~~G~d~i~l~~--~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~l~-------vnd~~------~~v~~~~~~ 90 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDV--MDGRFVPNITIGPLVVDSLRPITDLPLDVHLM-------IVEPD------QRVPDFIKA 90 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEE--EBSSSSSCBCCCHHHHHHHGGGCCSCEEEEEE-------SSSHH------HHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEEee--ccCCcccccccCHHHHHHHHhccCCcEEEEEE-------ecCHH------HHHHHHHHc
Confidence 4567788899999999952 1111 222368899988877777666542 22221 578888999
Q ss_pred CCCEEEEeee
Q psy7930 95 GADGFVIGAL 104 (146)
Q Consensus 95 GadG~VfG~L 104 (146)
|+||+.++..
T Consensus 91 Gad~v~vh~~ 100 (230)
T 1rpx_A 91 GADIVSVHCE 100 (230)
T ss_dssp TCSEEEEECS
T ss_pred CCCEEEEEec
Confidence 9999999976
No 88
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.11 E-value=0.065 Score=46.26 Aligned_cols=74 Identities=20% Similarity=0.359 Sum_probs=52.0
Q ss_pred EecCHHHHHHHHHcCCCEEEe-------cCCCCCCCC-CCCHHHHHHHHhh---CCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLEL-------CAALSEGGL-TPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIEL-------c~~l~~GGl-TPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
.+.+.+.|..+++.|||-|=+ |..-...|. .|...++..+.+. .++||.. -|| ..+.
T Consensus 191 ~V~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA-----~GG-I~~~------ 258 (400)
T 3ffs_A 191 NVVTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIA-----DGG-IRYS------ 258 (400)
T ss_dssp EECSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEE-----ESC-CCSH------
T ss_pred ecCCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEe-----cCC-CCCH------
Confidence 468999999999999999988 211111122 4777778777664 4788753 244 3332
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q psy7930 84 MALDCHQFVESGADGFVIG 102 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG 102 (146)
+||..+..+||++|.+|
T Consensus 259 --~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 259 --GDIGKALAVGASSVMIG 275 (400)
T ss_dssp --HHHHHHHTTTCSEEEEC
T ss_pred --HHHHHHHHcCCCEEEEC
Confidence 78888899999999999
No 89
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.09 E-value=0.12 Score=45.13 Aligned_cols=94 Identities=20% Similarity=0.224 Sum_probs=64.2
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
++.+.+.++.++|+|.|++..+ .|-.......++.+++.. ++||.+ ..+-+.+ +++.+.++|
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a--~g~~~~~~~~v~~i~~~~p~~~Vi~--------g~v~t~e-------~a~~l~~aG 291 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTA--HGHSKGVIERVRWVKQTFPDVQVIG--------GNIATAE-------AAKALAEAG 291 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECS--CCSBHHHHHHHHHHHHHCTTSEEEE--------EEECSHH-------HHHHHHHTT
T ss_pred chHHHHHHHhhcccceEEeccc--CCcchhHHHHHHHHHHHCCCceEEE--------eeeCcHH-------HHHHHHHcC
Confidence 3468888999999999999864 232223457888888877 778765 1344443 467889999
Q ss_pred CCEEEEeeecC-----------CCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 96 ADGFVIGALTG-----------EQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 96 adG~VfG~L~~-----------dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
||+|++|. .+ -|.-+...+.++.++++ +.|+.
T Consensus 292 aD~I~vg~-g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 336 (490)
T 4avf_A 292 ADAVKVGI-GPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLI 336 (490)
T ss_dssp CSEEEECS-SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEE
T ss_pred CCEEEECC-CCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEE
Confidence 99999974 22 12346677788888775 34543
No 90
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=95.05 E-value=0.46 Score=37.38 Aligned_cols=84 Identities=13% Similarity=0.101 Sum_probs=53.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCC----CCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCH------HHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSE----GGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQ------AEKEIMALDC 88 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~----GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~------~E~~~M~~dI 88 (146)
+.+..|.+.|.+-|||...-.. .-++| ....+++..+..++....+--| -..++.-.+ .-++.+++.|
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~-~~~nl~s~d~~~~r~~~~~~~~~~i 100 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAP-YIINIGNTTNLDTFSLGVDFLRAEI 100 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECC-TTCCTTCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEecc-ccccCCCCCcHHHHHHHHHHHHHHH
Confidence 3457788889999999432111 11222 4566777777778843344446 333443222 2378899999
Q ss_pred HHHHHcCCCEEEE--eee
Q psy7930 89 HQFVESGADGFVI--GAL 104 (146)
Q Consensus 89 ~~~~~~GadG~Vf--G~L 104 (146)
+.++++|++.+|+ |..
T Consensus 101 ~~A~~lGa~~vv~h~g~~ 118 (303)
T 3aal_A 101 ERTEAIGAKQLVLHPGAH 118 (303)
T ss_dssp HHHHHHTCSEEEECCEEC
T ss_pred HHHHHcCCCEEEECCCcC
Confidence 9999999999998 643
No 91
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=95.02 E-value=0.68 Score=35.78 Aligned_cols=112 Identities=13% Similarity=0.043 Sum_probs=68.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCC---CCcc--------cC----HHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAG---FDFV--------FS----QAEKEI 83 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~---gdF~--------Ys----~~E~~~ 83 (146)
+.+..+.+.|.+-|||...-. ..++| ...-++...+..++.+.++--+-.+ .+|. .+ +..++.
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~ 103 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHP-HTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAE 103 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCG-GGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHH
Confidence 456678899999999996321 11222 1444555556678988777431011 1220 11 356788
Q ss_pred HHHHHHHHHHcCCCEEEE--eeecCCCCcC----HHHHHHHHHHhC--CCCeEEeec
Q psy7930 84 MALDCHQFVESGADGFVI--GALTGEQEID----IEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 84 M~~dI~~~~~~GadG~Vf--G~L~~dg~iD----~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+++-|+.++++|++-+|+ |....+..-+ .+.++++.+.|+ |+.+.+|=-
T Consensus 104 ~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~ 160 (290)
T 3tva_A 104 MKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG 160 (290)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC
Confidence 999999999999999998 5443321111 344666777665 666667653
No 92
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=95.01 E-value=0.11 Score=40.10 Aligned_cols=100 Identities=12% Similarity=0.051 Sum_probs=66.1
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccC-HHHH-HHHHHHHHHHHHcCCCE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFS-QAEK-EIMALDCHQFVESGADG 98 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys-~~E~-~~M~~dI~~~~~~GadG 98 (146)
-+..|.+.|.+-|||...+... ++....+++..+..++++... -| . . .++ +..+ +.+++.|+.++++|++-
T Consensus 28 ~l~~a~~~G~~~vEl~~~~~~~--~~~~~~~~~~l~~~gl~i~~~-~~-~-~--~~~~~~~~~~~~~~~i~~A~~lGa~~ 100 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELREELFAG--PPDTEALTAAIQLQGLECVFS-SP-L-E--LWREDGQLNPELEPTLRRAEACGAGW 100 (264)
T ss_dssp GHHHHHHHTCSEEEEEGGGCSS--CCCHHHHHHHHHHTTCEEEEE-EE-E-E--EECTTSSBCTTHHHHHHHHHHTTCSE
T ss_pred HHHHHHHcCCCEEEEEHHhcCC--CHHHHHHHHHHHHcCCEEEEe-cc-h-h--hcCCchhHHHHHHHHHHHHHHcCCCE
Confidence 4567889999999998653222 346777777777788887543 34 2 1 112 2245 77899999999999999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEe
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFH 130 (146)
+++..=..... ..++++.+.|. |+.+.+|
T Consensus 101 v~~~~g~~~~~---~~l~~l~~~a~~~Gv~l~lE 131 (264)
T 1yx1_A 101 LKVSLGLLPEQ---PDLAALGRRLARHGLQLLVE 131 (264)
T ss_dssp EEEEEECCCSS---CCHHHHHHHHTTSSCEEEEE
T ss_pred EEEecCCCCcH---HHHHHHHHHHHhcCCEEEEe
Confidence 98754221111 16677777776 5556655
No 93
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=94.92 E-value=0.13 Score=39.80 Aligned_cols=99 Identities=17% Similarity=0.220 Sum_probs=64.7
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCccc---------CHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVF---------SQAEKEIMAL 86 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y---------s~~E~~~M~~ 86 (146)
+.|++++..+.+.|||+|-|-+.+ .+....+.++.+..+..+.+.+-| +.| .++ +..|
T Consensus 84 I~~~~~~~~~l~~Gad~V~lg~~~-----l~~p~~~~~~~~~~g~~~~~~l~~-~~g-~v~~~g~~~~~~~~~e------ 150 (244)
T 1vzw_A 84 IRDDDTLAAALATGCTRVNLGTAA-----LETPEWVAKVIAEHGDKIAVGLDV-RGT-TLRGRGWTRDGGDLYE------ 150 (244)
T ss_dssp CCSHHHHHHHHHTTCSEEEECHHH-----HHCHHHHHHHHHHHGGGEEEEEEE-ETT-EECCSSSCCCCCBHHH------
T ss_pred cCCHHHHHHHHHcCCCEEEECchH-----hhCHHHHHHHHHHcCCcEEEEEEc-cCC-EEEEcCcccCCCCHHH------
Confidence 468899999999999999886532 344567777766655456666766 533 333 2222
Q ss_pred HHHHHHHcCCCEEEEeeecCCCC---cCHHHHHHHHHHhCCCCeE
Q psy7930 87 DCHQFVESGADGFVIGALTGEQE---IDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~---iD~~~~~~Li~~a~~~~vt 128 (146)
.++.+.++|++.|.+=-.+++|. +|.+.++++.+.. +.|+.
T Consensus 151 ~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~~-~ipvi 194 (244)
T 1vzw_A 151 TLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAAT-DRPVV 194 (244)
T ss_dssp HHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHTC-SSCEE
T ss_pred HHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHhc-CCCEE
Confidence 24566679999988766667653 7999999998754 45543
No 94
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.92 E-value=0.18 Score=41.95 Aligned_cols=104 Identities=22% Similarity=0.270 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCCC------HHHHHHHHhhCCCcEEEEEccCCCCCccc
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTPT------LGLYRVIKRLVLVPVFVMIRVRAGFDFVF 76 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTPS------~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y 76 (146)
+.|..|+++|.|=|||..+- .-|| +.- ..+++.+++.++.||.|=|+| .+|.-
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~avr~~v~~pv~vRls~---~~~~~ 223 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGG-SPENRYRFLGEVIDAVREVWDGPLFVRISA---SDYHP 223 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHCCSCEEEEEES---CCCST
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccC-CHHHHHHHHHHHHHHHHHhcCCceEEEecc---ccccC
Confidence 56788999999999998541 1144 221 457888888888998777777 23421
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEE--eeecC-----CCCcCHHHHHHHHHHhCCCCeE
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVI--GALTG-----EQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~Vf--G~L~~-----dg~iD~~~~~~Li~~a~~~~vt 128 (146)
.....+...+=++.+.++|+|.+.+ |-..+ ....+.+..+++.+.. +.|+.
T Consensus 224 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~-~iPVi 281 (340)
T 3gr7_A 224 DGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA-DIPTG 281 (340)
T ss_dssp TSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT-TCCEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc-CCcEE
Confidence 1111233344567778899999987 43332 1224667777776655 34443
No 95
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=94.91 E-value=0.13 Score=40.41 Aligned_cols=100 Identities=19% Similarity=0.181 Sum_probs=61.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCC---CCCCCCHHHHHHHHhhCCCcEEEEE-ccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 20 ASALAAVRGGADRLELCAALSE---GGLTPTLGLYRVIKRLVLVPVFVMI-RVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~---GGlTPS~g~i~~~~~~~~ipv~vMI-RP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.++..|.+.|||-|++..|++. |--.-....++.+++.++ |+.+=+ -+ +++ ++++|+ ..-.+.+.++|
T Consensus 74 ~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~-pv~vKvi~e-~~~---l~~~~~---~~~a~~a~eaG 145 (225)
T 1mzh_A 74 KEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETP-SAVHKVIVE-TPY---LNEEEI---KKAVEICIEAG 145 (225)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCT-TSEEEEECC-GGG---CCHHHH---HHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhc-CceEEEEEe-CCC---CCHHHH---HHHHHHHHHhC
Confidence 5567899999999997666543 211112345667777776 765544 23 222 466653 44566788899
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHhC-CCCe
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTIIG-DRPI 127 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a~-~~~v 127 (146)
+|++.+--=...|..+.+.++.+.+..+ ++|+
T Consensus 146 ad~I~tstg~~~gga~~~~i~~v~~~v~~~ipV 178 (225)
T 1mzh_A 146 ADFIKTSTGFAPRGTTLEEVRLIKSSAKGRIKV 178 (225)
T ss_dssp CSEEECCCSCSSSCCCHHHHHHHHHHHTTSSEE
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHhCCCCcE
Confidence 9999332100124568888888888764 4554
No 96
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=94.88 E-value=0.33 Score=38.14 Aligned_cols=100 Identities=18% Similarity=0.105 Sum_probs=65.8
Q ss_pred HHHHHHHHHcCCCEE--EecCCCCCCCCCCCHH----HHHHHHh---hCCCcEEEEEccCCCCCcc--cCHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRL--ELCAALSEGGLTPTLG----LYRVIKR---LVLVPVFVMIRVRAGFDFV--FSQAEKEIMALD 87 (146)
Q Consensus 19 ~~~a~~A~~~GAdRI--ELc~~l~~GGlTPS~g----~i~~~~~---~~~ipv~vMIRP~R~gdF~--Ys~~E~~~M~~d 87 (146)
.+.+..|.+.||+.| -+... +++.. .++++.+ ..++|+.+.+-| +|.+.. .|..+++. -
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~------~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~-~G~~l~~~~~~~~~~~---~ 171 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVG------SDEDWEAYRDLGMIAETCEYWGMPLIAMMYP-RGKHIQNERDPELVAH---A 171 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEET------STTHHHHHHHHHHHHHHHHHHTCCEEEEEEE-CSTTCSCTTCHHHHHH---H
T ss_pred HHHHHHHHHcCCCEEEEEEecC------CCCHHHHHHHHHHHHHHHHHcCCCEEEEeCC-CCcccCCCCCHhHHHH---H
Confidence 678889999999999 55432 22322 2333332 348999888878 655321 34433322 2
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEeeccc
Q psy7930 88 CHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHRAFD 134 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHRAFD 134 (146)
.+.+.++|+|-+.++. ..|.+.++++.+.. +.|+..|=-+.
T Consensus 172 a~~a~~~Gad~i~~~~-----~~~~~~l~~i~~~~-~ipvva~GGi~ 212 (273)
T 2qjg_A 172 ARLGAELGADIVKTSY-----TGDIDSFRDVVKGC-PAPVVVAGGPK 212 (273)
T ss_dssp HHHHHHTTCSEEEECC-----CSSHHHHHHHHHHC-SSCEEEECCSC
T ss_pred HHHHHHcCCCEEEECC-----CCCHHHHHHHHHhC-CCCEEEEeCCC
Confidence 2678889999888883 47999999998876 67877765444
No 97
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=94.85 E-value=0.25 Score=38.97 Aligned_cols=111 Identities=13% Similarity=-0.021 Sum_probs=67.5
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccC-CCCCcccCH-----HHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVR-AGFDFVFSQ-----AEKEIMALDCHQ 90 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~-R~gdF~Ys~-----~E~~~M~~dI~~ 90 (146)
+++++..+.+.|.+-|||...-. ...++ ....++...+..++.+... -|- .+.++.-.+ .-++.+++-|+.
T Consensus 38 ~l~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~l~~~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 115 (309)
T 2hk0_A 38 FGPYIEKVAKLGFDIIEVAAHHI-NEYSDAELATIRKSAKDNGIILTAG-IGPSKTKNLSSEDAAVRAAGKAFFERTLSN 115 (309)
T ss_dssp SHHHHHHHHHTTCSEEEEEHHHH-TTSCHHHHHHHHHHHHHTTCEEEEE-CCCCSSSCSSCSCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhCCCEEEeccCCc-cccchhhHHHHHHHHHHcCCeEEEe-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 44458888999999999985311 11121 2344555556678888874 340 123343222 235789999999
Q ss_pred HHHcCCCEEEEeeec-CCCC----c-C--------HHHHHHHHHHhC--CCCeEEee
Q psy7930 91 FVESGADGFVIGALT-GEQE----I-D--------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 91 ~~~~GadG~VfG~L~-~dg~----i-D--------~~~~~~Li~~a~--~~~vtFHR 131 (146)
++++|++-+| |... +.|. . + .+.++++.+.|+ |+.+.+|=
T Consensus 116 A~~lG~~~v~-~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 171 (309)
T 2hk0_A 116 VAKLDIHTIG-GALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEV 171 (309)
T ss_dssp HHHTTCCEEE-ECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHcCCCEEE-eeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 9999999998 4321 1222 1 2 345666666664 67777764
No 98
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=94.81 E-value=0.26 Score=37.58 Aligned_cols=111 Identities=13% Similarity=0.038 Sum_probs=65.3
Q ss_pred EEecCHHHH-HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCC-CCcccCHH-----HHHHHH
Q psy7930 14 VCVDSVASA-LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAG-FDFVFSQA-----EKEIMA 85 (146)
Q Consensus 14 vcv~s~~~a-~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~-gdF~Ys~~-----E~~~M~ 85 (146)
+...+++++ ..+.+.|.+ |||.... ..+.|.. .++++++.. + ++. +.-| -. .++.-.+. -++.++
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl~~~~--~~~~~~~-~~~~~~~~~~~-~~~-~h~~-~~~~~l~~~~~~~r~~~~~~~~ 79 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEVYLDP--ALLEEDA-LFQSLRRRFSG-KLS-VHLP-FWNLDLLSPDPEVRGLTLRRLL 79 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEEECCG--GGTTCHH-HHHHHHHHCCS-CEE-EECC-CTTCCTTCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEEeccc--cccCcHH-HHHHHHHHhCC-CeE-EecC-ccCCCCCCCCHHHHHHHHHHHH
Confidence 344455554 557788999 9995331 1234432 677777777 4 443 3334 22 23433222 267889
Q ss_pred HHHHHHHHcCCCEEEEe--eecCCCC--------cCHHHHHHHHHHhC--CCCeEEee
Q psy7930 86 LDCHQFVESGADGFVIG--ALTGEQE--------IDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG--~L~~dg~--------iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
+-|+.++++|++.+|+. ....+.. -=.+.++++.+.|+ |+.+.+|=
T Consensus 80 ~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 137 (254)
T 3ayv_A 80 FGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLEN 137 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcC
Confidence 99999999999999884 3222210 01234566666665 77777764
No 99
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=94.78 E-value=0.085 Score=40.28 Aligned_cols=104 Identities=15% Similarity=0.049 Sum_probs=66.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCC-CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCH-----HHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLT-PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQ-----AEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlT-PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~-----~E~~~M~~dI~~~~~ 93 (146)
+.+..|.+.|.+-|||...- ++ -...-++...+..++.+..+- | +++|.-.+ .-++.+++.|+.+++
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~~l~~~gl~~~~~~-~--~~~~~~~d~~~r~~~~~~~~~~i~~a~~ 94 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQ----VAAIGLGEAGRIVRANGLKLTGLC-R--GGFFPAPDASGREKAIDDNRRAVDEAAE 94 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHH----HHHHCHHHHHHHHHHHTCEESCEE-E--EECCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecccc----ccccCHHHHHHHHHHcCCceEEee-c--CCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45667888999999997520 11 134445555555677655433 3 23444332 235789999999999
Q ss_pred cCCCEEEEeee-cCCCCcC--------HHHHHHHHHHhC--CCCeEEe
Q psy7930 94 SGADGFVIGAL-TGEQEID--------IEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 94 ~GadG~VfG~L-~~dg~iD--------~~~~~~Li~~a~--~~~vtFH 130 (146)
+|++-+|+..= .+.+..+ .+.++++.+.|+ |+.+.+|
T Consensus 95 lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 95 LGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp TTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred hCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 99999988641 1223333 355677777764 7888888
No 100
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=94.76 E-value=0.54 Score=36.28 Aligned_cols=100 Identities=12% Similarity=0.078 Sum_probs=66.1
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCH----HHHHHHHHHHHHHHHcCC
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQ----AEKEIMALDCHQFVESGA 96 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~----~E~~~M~~dI~~~~~~Ga 96 (146)
.+..|.+.|.+-|||...+ |....++...+..++.+..+ + -.+ +. ++ .-++.+++-|+.++++|+
T Consensus 36 ~l~~~~~~G~~~vEl~~~~------~~~~~~~~~l~~~gl~~~~~--~-~~~-~~-~~~~~~~~~~~~~~~i~~a~~lG~ 104 (301)
T 3cny_A 36 LLSDIVVAGFQGTEVGGFF------PGPEKLNYELKLRNLEIAGQ--W-FSS-YI-IRDGIEKASEAFEKHCQYLKAINA 104 (301)
T ss_dssp HHHHHHHHTCCEECCCTTC------CCHHHHHHHHHHTTCEECEE--E-EEE-CH-HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCEEEecCCC------CCHHHHHHHHHHCCCeEEEE--e-ccC-CC-ChhhHHHHHHHHHHHHHHHHHcCC
Confidence 4567788899999998432 36677777777788887776 3 222 21 22 236778999999999999
Q ss_pred CEEEEee--------ecC--C--CCc-C-------HHHHHHHHHHhC--CCCeEEee
Q psy7930 97 DGFVIGA--------LTG--E--QEI-D-------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 97 dG~VfG~--------L~~--d--g~i-D-------~~~~~~Li~~a~--~~~vtFHR 131 (146)
+-+|+.. ..+ + ... . .+.++++.+.|+ |+.+.+|-
T Consensus 105 ~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 105 PVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp CEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 9999864 111 0 011 1 245566666664 77787774
No 101
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=94.74 E-value=1 Score=34.22 Aligned_cols=107 Identities=15% Similarity=0.109 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCC--CCCHHHHHHHHhhCCCcEEEEEccCCCCCccc-CHHHHHHHHHHHHHHHHcCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGL--TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVF-SQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGl--TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y-s~~E~~~M~~dI~~~~~~Ga 96 (146)
+.+..|.+.|.+-|||.......-. ......+++..+..++.+..+=-| - +|.- ++...+.+++-|+.++++|+
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~-~--~~~~~~~~~~~~~~~~i~~a~~lG~ 99 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAV-Y--PFNQLTEEVVKKTEGLLRDAQGVGA 99 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEE-T--TTTSCCHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhh-h--ccCCcHHHHHHHHHHHHHHHHHhCC
Confidence 3456778899999999853321111 134666777777788887655333 1 1221 35567889999999999999
Q ss_pred CEEEEeeecCCCC--c---CHHHHHHHHHHhC--CCCeEEe
Q psy7930 97 DGFVIGALTGEQE--I---DIEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 97 dG~VfG~L~~dg~--i---D~~~~~~Li~~a~--~~~vtFH 130 (146)
+-+|+..-. .+. . ..+.++++.+.|+ |+.+.+|
T Consensus 100 ~~v~~~~g~-~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E 139 (272)
T 2q02_A 100 RALVLCPLN-DGTIVPPEVTVEAIKRLSDLFARYDIQGLVE 139 (272)
T ss_dssp SEEEECCCC-SSBCCCHHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred CEEEEccCC-CchhHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 999974221 111 1 1667788888775 5666665
No 102
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=94.74 E-value=0.25 Score=41.36 Aligned_cols=75 Identities=16% Similarity=0.166 Sum_probs=59.6
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCC-----CCCCCC--CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAA-----LSEGGL--TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~-----l~~GGl--TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
..+++| .|.+.|..|+++||.-|=..-. -..||. ..++..|+++++.++|||.-..|- |+
T Consensus 13 ~vimdv--~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~ri---gh-------- 79 (291)
T 3o07_A 13 GVIMDV--VTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRI---GH-------- 79 (291)
T ss_dssp CEEEEE--SSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEET---TC--------
T ss_pred Ceeeec--CCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEec---Cc--------
Confidence 345555 8999999999999998876621 256886 678999999999999999888886 33
Q ss_pred HHHHHHHHHHHHcCCCEE
Q psy7930 82 EIMALDCHQFVESGADGF 99 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~ 99 (146)
..+.+.+.++|+|=|
T Consensus 80 ---~~EAqilea~GaD~I 94 (291)
T 3o07_A 80 ---FVEAQIIEALEVDYI 94 (291)
T ss_dssp ---HHHHHHHHHTTCSEE
T ss_pred ---HHHHHHHHHcCCCEE
Confidence 466777888999944
No 103
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=94.73 E-value=0.13 Score=40.18 Aligned_cols=87 Identities=16% Similarity=0.211 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCC--CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGL--TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGl--TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+-+..+++.|++.|=+. +....|. .|...+++++++.+++||.+. || ..+. +|+..+++.|+
T Consensus 159 ~e~~~~~~~~G~~~i~~t-~~~~~g~~~g~~~~~i~~l~~~~~ipvia~-----GG--I~~~-------ed~~~~~~~Ga 223 (266)
T 2w6r_A 159 RDWVVEVEKRGAGEILLT-SIDRDGTKSGYDTEMIRFVRPLTTLPIIAS-----GG--AGKM-------EHFLEAFLAGA 223 (266)
T ss_dssp HHHHHHHHHTTCSEEEEE-ETTTTTTCSCCCHHHHHHHGGGCCSCEEEE-----SC--CCSH-------HHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEE-eecCCCCcCCCCHHHHHHHHHHcCCCEEEe-----CC--CCCH-------HHHHHHHHcCC
Confidence 345688999999999663 3333343 257899999999999998653 44 2223 45666667899
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHH
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~ 120 (146)
||+++|=-=-.+..+.+.+.+++.
T Consensus 224 dgv~vgsal~~~~~~~~~~~~~l~ 247 (266)
T 2w6r_A 224 DAALAASVFHFREIDMRELKEYLK 247 (266)
T ss_dssp SEEEESTTTC--------------
T ss_pred HHHHccHHHHcCCCCHHHHHHHHH
Confidence 999999433355566666655554
No 104
>4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A*
Probab=94.73 E-value=0.018 Score=49.26 Aligned_cols=56 Identities=14% Similarity=0.229 Sum_probs=46.0
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEe
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFH 130 (146)
.|+...-++|.++++.++++|+|||++=.-..++..|...+..++++|. ++.+.||
T Consensus 97 ~Yss~d~~v~~~h~~~Ak~aGIDgf~l~w~~~~~~~d~~~l~~~l~aA~~~~~k~~f~ 154 (380)
T 4ad1_A 97 RYSSSDPNILTKHMDMFVMARTGVLALTWWNEQDETEAKRIGLILDAADKKKIKVCFH 154 (380)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTEEEEEEEECCCCSHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHcCCCEEEEEecCCCCcccHHHHHHHHHHHHHcCCeEEEE
Confidence 4777778999999999999999999998776666666677888888776 6777665
No 105
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=94.66 E-value=0.63 Score=36.97 Aligned_cols=111 Identities=12% Similarity=0.099 Sum_probs=70.5
Q ss_pred CHH-HHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCc----------ccC----HHHH
Q psy7930 18 SVA-SALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDF----------VFS----QAEK 81 (146)
Q Consensus 18 s~~-~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF----------~Ys----~~E~ 81 (146)
+++ ....|.+.|.+-|||... ..+-..| +...++...+..++.+..+--| -.+.+ .++ +.-+
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~-~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~ 107 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGY-GKGAIGGVPMMDFKKMAEDAGLKIISSHVN-PVDTSISDPFKAMIFKYSKEVTPKIM 107 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCE-ETTEETTEEHHHHHHHHHHTTCEEEEEECC-CBCTTCSSTTTTBCCSCCTTTHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeccc-cCcccCCCCHHHHHHHHHHcCCeEEEEecc-cccccccCcccccccccchhhHHHHH
Confidence 444 445788899999999752 1110122 4667777777789888766555 21111 122 4447
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeecCCCCc-C----HHHHHHHHHHhC--CCC--eEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIGALTGEQEI-D----IEFIRQLKTIIG--DRP--ITFH 130 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L~~dg~i-D----~~~~~~Li~~a~--~~~--vtFH 130 (146)
+.+++-|+.++++|++-+|++.......- + .+.++++.+.|. |+. +.+|
T Consensus 108 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 108 EYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 88999999999999999999754332110 1 234556666665 788 8776
No 106
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=94.61 E-value=0.52 Score=39.43 Aligned_cols=103 Identities=16% Similarity=0.140 Sum_probs=65.1
Q ss_pred HHHHHHHHcCCCEEEecCC--------------C---CCCCCCCC------HHHHHHHHhhC--CCcEEEEEccCCCCCc
Q psy7930 20 ASALAAVRGGADRLELCAA--------------L---SEGGLTPT------LGLYRVIKRLV--LVPVFVMIRVRAGFDF 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~--------------l---~~GGlTPS------~g~i~~~~~~~--~ipv~vMIRP~R~gdF 74 (146)
+.|..|+++|.|=|||..+ . .-||. .- ..+++.+++.+ +.||.|=|+| .+|
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~avg~d~pV~vRis~---~~~ 237 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGS-FDNRSRFLLETLAAVREVWPENLPLTARFGV---LEY 237 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHTTSCTTSCEEEEEEE---ECS
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcC-HHHHHHHHHHHHHHHHHHcCCCceEEEEecc---hhc
Confidence 5678899999999999853 1 12341 11 34777777777 4677665556 345
Q ss_pred ccCH-HHHHHHHHHHHHHHHcCCCEEEEeeec--CC-----C-CcCHHHHHHHHHHhCCCCe
Q psy7930 75 VFSQ-AEKEIMALDCHQFVESGADGFVIGALT--GE-----Q-EIDIEFIRQLKTIIGDRPI 127 (146)
Q Consensus 75 ~Ys~-~E~~~M~~dI~~~~~~GadG~VfG~L~--~d-----g-~iD~~~~~~Li~~a~~~~v 127 (146)
.=.. ...+...+=++.+.++|+|.+-+-.-+ ++ + ..+.+..+++.+.. +.|+
T Consensus 238 ~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPV 298 (363)
T 3l5l_A 238 DGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREA-KLPV 298 (363)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCCE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHc-CCcE
Confidence 4333 455566666788899999998875422 11 2 24667777776665 3444
No 107
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.59 E-value=0.14 Score=38.85 Aligned_cols=70 Identities=13% Similarity=0.162 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCC-CCC----HHHHHHHHhhCCCc--EEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGL-TPT----LGLYRVIKRLVLVP--VFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGl-TPS----~g~i~~~~~~~~ip--v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
.+.+..+.++|+|.+++-- + .|. .|. ..+++++++.++.| +++||++ . . +.++.+
T Consensus 19 ~~~~~~~~~~G~~~i~~~~-~--dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d-~-~-------------~~i~~~ 80 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDI-M--DGQFVPNISFGADVVASMRKHSKLVFDCHLMVVD-P-E-------------RYVEAF 80 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEE-E--BSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSS-G-G-------------GGHHHH
T ss_pred HHHHHHHHHcCCCEEEEEe-e--cCCCCCccccCHHHHHHHHHhCCCCEEEEEeecC-H-H-------------HHHHHH
Confidence 3567778899999999873 1 233 333 88999999877655 5556665 2 1 147888
Q ss_pred HHcCCCEEEEeeecC
Q psy7930 92 VESGADGFVIGALTG 106 (146)
Q Consensus 92 ~~~GadG~VfG~L~~ 106 (146)
.++|+|++.++....
T Consensus 81 ~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 81 AQAGADIMTIHTEST 95 (220)
T ss_dssp HHHTCSEEEEEGGGC
T ss_pred HHcCCCEEEEccCcc
Confidence 999999999987654
No 108
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=94.54 E-value=0.13 Score=43.50 Aligned_cols=72 Identities=18% Similarity=0.133 Sum_probs=53.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
.+.+++..|++.|||-|-+...- ...+-.|+...+.++++.+ ++||.+ -|| .. +. .|+..+.
T Consensus 238 ~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia-----~GG-I~-~g-------~D~~kal 303 (368)
T 2nli_A 238 QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVF-----DSG-VR-RG-------EHVAKAL 303 (368)
T ss_dssp CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEE-----CSS-CC-SH-------HHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEE-----ECC-CC-CH-------HHHHHHH
Confidence 78999999999999999985421 1223456788888888877 688754 233 33 22 5667777
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
.+|||+|.+|
T Consensus 304 alGAd~V~iG 313 (368)
T 2nli_A 304 ASGADVVALG 313 (368)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 8999999999
No 109
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.50 E-value=0.14 Score=43.32 Aligned_cols=72 Identities=19% Similarity=0.339 Sum_probs=51.7
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCCC----------CCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGGL----------TPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GGl----------TPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.+.+.+..+++.|||-|-+ ....|+. .|....+..+.+ ..++||.. -|| -.+.
T Consensus 152 ~v~t~e~A~~l~~aGaD~I~V--G~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA-----~GG-I~~~---- 219 (361)
T 3khj_A 152 NVVTEEATKELIENGADGIKV--GIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIA-----DGG-IRYS---- 219 (361)
T ss_dssp EECSHHHHHHHHHTTCSEEEE--CSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEE-----ESC-CCSH----
T ss_pred cCCCHHHHHHHHHcCcCEEEE--ecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEE-----ECC-CCCH----
Confidence 568999999999999999987 2222221 477777777754 35788753 244 3322
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
+||..+..+|||+|.+|
T Consensus 220 ----~di~kala~GAd~V~vG 236 (361)
T 3khj_A 220 ----GDIGKALAVGASSVMIG 236 (361)
T ss_dssp ----HHHHHHHHHTCSEEEES
T ss_pred ----HHHHHHHHcCCCEEEEC
Confidence 67888888999999999
No 110
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=94.48 E-value=0.37 Score=37.19 Aligned_cols=89 Identities=16% Similarity=0.199 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+-+..+++.|++.|=+.+ ...+| ..|...+++++++.+++||.+ -|| ..+. +|+..+++.|+
T Consensus 154 ~e~~~~~~~~G~~~i~~~~-~~~~g~~~g~~~~~~~~l~~~~~ipvia-----~GG--I~~~-------~d~~~~~~~Ga 218 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTS-IDRDGTKSGYDTEMIRFVRPLTTLPIIA-----SGG--AGKM-------EHFLEAFLAGA 218 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEE-TTTTTSCSCCCHHHHHHHGGGCCSCEEE-----ESC--CCSH-------HHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCEEEEEe-ccCCCCCCCCCHHHHHHHHHhcCCCEEE-----ECC--CCCH-------HHHHHHHHcCC
Confidence 4668999999999987643 22333 346789999999988999865 244 2222 46666778899
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
||+++|=-=-.+.+|.+...+.+...
T Consensus 219 dgv~vGsal~~~~~~~~~~~~~l~~~ 244 (253)
T 1thf_D 219 DAALAASVFHFREIDVRELKEYLKKH 244 (253)
T ss_dssp SEEEESHHHHTTCSCHHHHHHHHHHT
T ss_pred hHHHHHHHHHcCCCCHHHHHHHHHHc
Confidence 99999932224567887777666544
No 111
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=94.45 E-value=0.14 Score=43.03 Aligned_cols=73 Identities=23% Similarity=0.250 Sum_probs=53.5
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
+.+.+++..|.+.|||-|-+-... ...|..|+...+.++++.+ ++||.. -|| . .+. .|+..+
T Consensus 233 ~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia-----~GG-I-~~~-------~D~~k~ 298 (370)
T 1gox_A 233 VITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFL-----DGG-V-RRG-------TDVFKA 298 (370)
T ss_dssp CCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEE-----ESS-C-CSH-------HHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEE-----ECC-C-CCH-------HHHHHH
Confidence 478999999999999999995421 1222357888899998877 688754 244 2 222 567777
Q ss_pred HHcCCCEEEEe
Q psy7930 92 VESGADGFVIG 102 (146)
Q Consensus 92 ~~~GadG~VfG 102 (146)
..+|||+|.+|
T Consensus 299 l~~GAdaV~iG 309 (370)
T 1gox_A 299 LALGAAGVFIG 309 (370)
T ss_dssp HHHTCSEEEEC
T ss_pred HHcCCCEEeec
Confidence 78899999999
No 112
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=94.44 E-value=0.1 Score=45.38 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=52.0
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCCC----------CC---CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGGL----------TP---TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GGl----------TP---S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
-+.+.+.|..+++.|||-|-+ ....||. .| +...+.++++..++||.. -|| ..+.
T Consensus 303 ~v~t~~~a~~l~~aGad~I~v--g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia-----~GG-I~~~---- 370 (514)
T 1jcn_A 303 NVVTAAQAKNLIDAGVDGLRV--GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA-----DGG-IQTV---- 370 (514)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE-----ESC-CCSH----
T ss_pred ccchHHHHHHHHHcCCCEEEE--CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE-----ECC-CCCH----
Confidence 468999999999999999998 2233443 12 345666677777899854 233 3222
Q ss_pred HHHHHHHHHHHHcCCCEEEEee
Q psy7930 82 EIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~ 103 (146)
.|+..+..+|||++.+|=
T Consensus 371 ----~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 371 ----GHVVKALALGASTVMMGS 388 (514)
T ss_dssp ----HHHHHHHHTTCSEEEEST
T ss_pred ----HHHHHHHHcCCCeeeECH
Confidence 577788889999999994
No 113
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=94.44 E-value=0.064 Score=41.11 Aligned_cols=107 Identities=8% Similarity=-0.072 Sum_probs=66.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCC-CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHH----HHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGG-LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAE----KEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GG-lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E----~~~M~~dI~~~~~~ 94 (146)
+.+..|.+.|.+-|||...-...- ...+..-+++..+..++.+..+--| .+|.-.+.+ ++.+++-|+.++++
T Consensus 20 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (281)
T 3u0h_A 20 LYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLP---LNLYDSEPVFLRELSLLPDRARLCARL 96 (281)
T ss_dssp HHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECC---SCTTSCHHHHHHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEeccc---ccccCCCHHHHHHHHHHHHHHHHHHHc
Confidence 456678899999999986321000 0113455555666668877544333 355544433 45678899999999
Q ss_pred CCCEEEEeeecCCCCcC--------HHHHHHHHHHhC--CCCeEEe
Q psy7930 95 GADGFVIGALTGEQEID--------IEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD--------~~~~~~Li~~a~--~~~vtFH 130 (146)
|++.+++++.. .+.-+ .+.++++.+.|+ |+.+.+|
T Consensus 97 G~~~v~~~~~p-~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 141 (281)
T 3u0h_A 97 GARSVTAFLWP-SMDEEPVRYISQLARRIRQVAVELLPLGMRVGLE 141 (281)
T ss_dssp TCCEEEEECCS-EESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCCEEEEeecC-CCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 99999987532 22211 355666666665 6777776
No 114
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.43 E-value=0.33 Score=40.37 Aligned_cols=96 Identities=21% Similarity=0.336 Sum_probs=61.7
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCc
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDF 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF 74 (146)
+.|..|.++|.|=|||..+- .-|| +. ...+++.+++.+ +.||-|=|+| - +|
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~avG~d~pV~vRls~-~--~~ 231 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVREVVPRELPLFVRVSA-T--DW 231 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHSCTTSCEEEEEES-C--CC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHHHhcCCceEEEEecc-c--cc
Confidence 56788999999999997531 1244 22 145788888887 6788666666 3 22
Q ss_pred c---cCHHHHHHHHHHHHHHHHcCCCEEEEee--ecCC------CCcCHHHHHHHHHHh
Q psy7930 75 V---FSQAEKEIMALDCHQFVESGADGFVIGA--LTGE------QEIDIEFIRQLKTII 122 (146)
Q Consensus 75 ~---Ys~~E~~~M~~dI~~~~~~GadG~VfG~--L~~d------g~iD~~~~~~Li~~a 122 (146)
. ++.+| ..+=++.+.++|+|.+-+.. ..++ ...+.+..+++.+..
T Consensus 232 ~~~g~~~~~---~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~ 287 (349)
T 3hgj_A 232 GEGGWSLED---TLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV 287 (349)
T ss_dssp STTSCCHHH---HHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH
T ss_pred cCCCCCHHH---HHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc
Confidence 2 33343 44557778889999988742 3322 125677777776655
No 115
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=94.30 E-value=0.12 Score=45.22 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=52.2
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCC--C--------CCCHHHHHHHHhhC---------CCcEEEEEccCCCCCcc
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGG--L--------TPTLGLYRVIKRLV---------LVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GG--l--------TPS~g~i~~~~~~~---------~ipv~vMIRP~R~gdF~ 75 (146)
.+.+.+++..+.+.|||-|.+ ...-|+ + .|....+..+.+.. ++||.. .|+..
T Consensus 291 ~V~t~~~a~~l~~aGad~I~V--g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia------~GGi~ 362 (503)
T 1me8_A 291 NIVDGEGFRYLADAGADFIKI--GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCS------DGGIV 362 (503)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEE------ESCCC
T ss_pred cccCHHHHHHHHHhCCCeEEe--cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEE------eCCCC
Confidence 478899999999999999999 333332 1 36666666665443 577643 23344
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 76 FSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+. .||..+..+||+++.+|-
T Consensus 363 ~~--------~di~kAlalGA~~V~iG~ 382 (503)
T 1me8_A 363 YD--------YHMTLALAMGADFIMLGR 382 (503)
T ss_dssp SH--------HHHHHHHHTTCSEEEESH
T ss_pred CH--------HHHHHHHHcCCCEEEECc
Confidence 44 688899999999999994
No 116
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=94.25 E-value=0.21 Score=38.42 Aligned_cols=70 Identities=20% Similarity=0.194 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCC-CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc---
Q psy7930 19 VASALAAVRGGADRLELCAALSEG-GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES--- 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~G-GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~--- 94 (146)
.+.+..+++.|++.|=+.+--..| +..|....++++++..++||.+ -||=. +. +|+..++++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~~~ipvia-----~GGI~--~~-------~d~~~~~~~~~~ 217 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADRTDAPVIA-----SGGVS--SL-------DDLRAIATLTHR 217 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTTCSSCEEE-----ESCCC--SH-------HHHHHHHTTGGG
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHhCCCCEEE-----ECCCC--CH-------HHHHHHHhhccC
Confidence 677899999999999665522222 2357889999999988899865 25522 22 677778888
Q ss_pred CCCEEEEe
Q psy7930 95 GADGFVIG 102 (146)
Q Consensus 95 GadG~VfG 102 (146)
|+|||++|
T Consensus 218 Gad~v~vG 225 (244)
T 2y88_A 218 GVEGAIVG 225 (244)
T ss_dssp TEEEEEEC
T ss_pred CCCEEEEc
Confidence 99999999
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.18 E-value=0.17 Score=44.55 Aligned_cols=74 Identities=22% Similarity=0.347 Sum_probs=52.3
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCC---------CC-CCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEG---------GL-TPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~G---------Gl-TPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
-+.+.+.|..+++.|||-|-+ +...| |. .|....+..+.+ ..++||.+ -|| ..+.
T Consensus 304 ~v~t~e~a~~~~~aGad~i~v--g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa-----~GG-I~~~---- 371 (511)
T 3usb_A 304 NVATAEATKALIEAGANVVKV--GIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIA-----DGG-IKYS---- 371 (511)
T ss_dssp EECSHHHHHHHHHHTCSEEEE--CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEE-----ESC-CCSH----
T ss_pred eeccHHHHHHHHHhCCCEEEE--CCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEE-----eCC-CCCH----
Confidence 567999999999999999986 22222 22 677777766644 34688754 233 3333
Q ss_pred HHHHHHHHHHHHcCCCEEEEeee
Q psy7930 82 EIMALDCHQFVESGADGFVIGAL 104 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L 104 (146)
.||..+..+||+++++|=.
T Consensus 372 ----~di~kala~GA~~V~vGs~ 390 (511)
T 3usb_A 372 ----GDMVKALAAGAHVVMLGSM 390 (511)
T ss_dssp ----HHHHHHHHTTCSEEEESTT
T ss_pred ----HHHHHHHHhCchhheecHH
Confidence 6778888999999999943
No 118
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=94.16 E-value=0.22 Score=41.24 Aligned_cols=95 Identities=17% Similarity=0.050 Sum_probs=57.3
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh---CCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
++..|.+.|||=|-+--++..+...-....+.++++. .++|+.+|- | +|..+..++ | ......+.+.++|||
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~-~-~G~~~~~d~-e--~i~~aariA~elGAD 204 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVT-G-VGKDMVRDQ-R--YFSLATRIAAEMGAQ 204 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEE-C-C----CCSH-H--HHHHHHHHHHHTTCS
T ss_pred HHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEEC-C-CCCccCCCH-H--HHHHHHHHHHHhCCC
Confidence 5666789999999887765422211123333344433 379998875 7 777776543 2 334677889999999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
.|-+.. ++ +.++++++.+ ++|+.
T Consensus 205 ~VKt~~-t~------e~~~~vv~~~-~vPVv 227 (295)
T 3glc_A 205 IIKTYY-VE------KGFERIVAGC-PVPIV 227 (295)
T ss_dssp EEEEEC-CT------TTHHHHHHTC-SSCEE
T ss_pred EEEeCC-CH------HHHHHHHHhC-CCcEE
Confidence 999984 43 2356666554 45554
No 119
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=94.15 E-value=0.16 Score=43.37 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=52.7
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
+.+.++|..|++.|||-|-+-..- ...+-.|+...+.++++.+ ++||.+ -|| ... . .|+..+
T Consensus 260 v~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia-----~GG-I~~-g-------~Dv~ka 325 (392)
T 2nzl_A 260 ILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFL-----DGG-VRK-G-------TDVLKA 325 (392)
T ss_dssp ECCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEE-----CSS-CCS-H-------HHHHHH
T ss_pred cCCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEE-----ECC-CCC-H-------HHHHHH
Confidence 478999999999999999985321 1223356778888888876 478754 233 332 2 567777
Q ss_pred HHcCCCEEEEe
Q psy7930 92 VESGADGFVIG 102 (146)
Q Consensus 92 ~~~GadG~VfG 102 (146)
..+|||+|.+|
T Consensus 326 lalGAd~V~iG 336 (392)
T 2nzl_A 326 LALGAKAVFVG 336 (392)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhCCCeeEEC
Confidence 78999999999
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.05 E-value=0.16 Score=44.39 Aligned_cols=72 Identities=22% Similarity=0.345 Sum_probs=52.1
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCC---------C-CCCHHHHHHHHhhC---CCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGG---------L-TPTLGLYRVIKRLV---LVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GG---------l-TPS~g~i~~~~~~~---~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.+.+.+..++++|||-|-+- ...|+ . .|....+.++.+.+ ++||.. -|| ..+.
T Consensus 277 ~v~t~e~a~~l~~aGaD~I~vg--~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa-----~GG-I~~~---- 344 (490)
T 4avf_A 277 NIATAEAAKALAEAGADAVKVG--IGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIA-----DGG-IRFS---- 344 (490)
T ss_dssp EECSHHHHHHHHHTTCSEEEEC--SSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEE-----ESC-CCSH----
T ss_pred eeCcHHHHHHHHHcCCCEEEEC--CCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEE-----eCC-CCCH----
Confidence 3789999999999999999872 11221 1 57777788877744 788754 244 3333
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
.||..+.++||+++.+|
T Consensus 345 ----~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 345 ----GDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp ----HHHHHHHHHTCSEEEEC
T ss_pred ----HHHHHHHHcCCCeeeec
Confidence 67777788999999999
No 121
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.04 E-value=0.15 Score=43.36 Aligned_cols=70 Identities=26% Similarity=0.206 Sum_probs=48.0
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCC----------CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGG----------LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GG----------lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.++++|+.+++.|||-|-+ + ..-|+ -.|....+.++.+... ||.. -|| ..+.
T Consensus 149 V~T~e~A~~a~~aGaD~I~V-g-~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIA-----dGG-I~~~-------- 211 (361)
T 3r2g_A 149 VATYAGADYLASCGADIIKA-G-IGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVA-----DGG-IKTS-------- 211 (361)
T ss_dssp ECSHHHHHHHHHTTCSEEEE-C-CSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEE-----ESC-CCSH--------
T ss_pred cCCHHHHHHHHHcCCCEEEE-c-CCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEE-----ECC-CCCH--------
Confidence 67999999999999999998 2 22221 1355555665555444 5532 133 3333
Q ss_pred HHHHHHHHcCCCEEEEe
Q psy7930 86 LDCHQFVESGADGFVIG 102 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG 102 (146)
.||..+.++|||+|.+|
T Consensus 212 ~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 212 GDIVKALAFGADFVMIG 228 (361)
T ss_dssp HHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 68888889999999999
No 122
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=94.03 E-value=1.1 Score=35.77 Aligned_cols=80 Identities=14% Similarity=-0.007 Sum_probs=52.0
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC------CHHHHHHHHhhCCCc---EEEEEc-cCCCCCcccCH-----HHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP------TLGLYRVIKRLVLVP---VFVMIR-VRAGFDFVFSQ-----AEKEIM 84 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP------S~g~i~~~~~~~~ip---v~vMIR-P~R~gdF~Ys~-----~E~~~M 84 (146)
+-+..+.+.|.+-|||...-.. .. | ....++...+..++. +..++- | +..++.-.+ ..++.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~-~~-~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~-~~~~l~~~d~~~r~~~~~~~ 111 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGL-PE-NYAQDLENYTNLRHYLDSEGLENVKISTNVGAT-RTFDPSSNYPEQRQEALEYL 111 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCC-GG-GHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCC-SSSCTTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCc-cc-ccccchHHHHHHHHHHHHCCCCcceeEEEeccC-CCCCCCCCCHHHHHHHHHHH
Confidence 4567788999999999753111 11 2 233455555566888 776532 4 444444322 235889
Q ss_pred HHHHHHHHHcCCCEEEEee
Q psy7930 85 ALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~ 103 (146)
++-|+.++++|++-+ +|.
T Consensus 112 ~~~i~~A~~lG~~~v-~~~ 129 (335)
T 2qw5_A 112 KSRVDITAALGGEIM-MGP 129 (335)
T ss_dssp HHHHHHHHHTTCSEE-EEC
T ss_pred HHHHHHHHHcCCCEE-ecc
Confidence 999999999999988 553
No 123
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.01 E-value=0.17 Score=42.49 Aligned_cols=73 Identities=18% Similarity=0.127 Sum_probs=50.3
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCC----------CCCCHHHHHHHHhh---CCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGG----------LTPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GG----------lTPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.|.++|..|++.|||-|-+-. .-|+ ..|....+..+.+. .++||.. -|| ....
T Consensus 168 ~v~t~e~A~~a~~aGaD~I~v~~--g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa-----~GG-I~~g---- 235 (351)
T 2c6q_A 168 NVVTGEMVEELILSGADIIKVGI--GPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIIS-----DGG-CSCP---- 235 (351)
T ss_dssp EECSHHHHHHHHHTTCSEEEECS--SCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEE-----ESC-CCSH----
T ss_pred eCCCHHHHHHHHHhCCCEEEECC--CCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEE-----eCC-CCCH----
Confidence 47889999999999999996631 1111 24666666666543 4788754 122 2222
Q ss_pred HHHHHHHHHHHHcCCCEEEEee
Q psy7930 82 EIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~ 103 (146)
.||..+..+|||+|.+|=
T Consensus 236 ----~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 236 ----GDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp ----HHHHHHHHTTCSEEEEST
T ss_pred ----HHHHHHHHcCCCceeccH
Confidence 688899999999999984
No 124
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=93.99 E-value=0.6 Score=38.39 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=67.2
Q ss_pred cCHHHHHHHHHcCCCEEEecCC-CCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 17 DSVASALAAVRGGADRLELCAA-LSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~-l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.++.+.....++||.=|-.... -..|| |...++.+++.+++|| +|= ||..++.+ |..++.+|
T Consensus 64 ~dp~~iA~~~~~GA~aiSVLTd~~~F~G---s~~~L~~vr~~v~lPv---LrK----DFiid~yQ-------I~eAr~~G 126 (258)
T 4a29_A 64 RDPIEYAKFMERYAVGLSITTEEKYFNG---SYETLRKIASSVSIPI---LMS----DFIVKESQ-------IDDAYNLG 126 (258)
T ss_dssp CCHHHHHHHHTTTCSEEEEECCSTTTCC---CHHHHHHHHTTCSSCE---EEE----SCCCSHHH-------HHHHHHHT
T ss_pred CCHHHHHHHHhCCCeEEEEeCCCCCCCC---CHHHHHHHHHhcCCCE---eec----cccccHHH-------HHHHHHcC
Confidence 4566666677899999987653 34455 7899999999999997 565 89999755 56688999
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHhC--CCC
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTIIG--DRP 126 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~ 126 (146)
||.|.+=+ .-++.+.+++|.+.|+ ||.
T Consensus 127 ADaILLI~----a~L~~~~l~~l~~~A~~lGl~ 155 (258)
T 4a29_A 127 ADTVLLIV----KILTERELESLLEYARSYGME 155 (258)
T ss_dssp CSEEEEEG----GGSCHHHHHHHHHHHHHTTCC
T ss_pred CCeeehHH----hhcCHHHHHHHHHHHHHHhHH
Confidence 99986421 1356678999999997 554
No 125
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=93.98 E-value=0.11 Score=42.31 Aligned_cols=76 Identities=24% Similarity=0.320 Sum_probs=54.5
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC--CcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL--VPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~--ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
..+++-++|++++..|.+.|||.|=|=+ -+...++++++.++ .| ++-|-+ -|| .. . +.
T Consensus 183 ~~i~vev~tlee~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~-~~~i~A-sGG-I~--~-------~n 242 (273)
T 2b7n_A 183 AKIEIECESFEEAKNAMNAGADIVMCDN--------LSVLETKEIAAYRDAHYP-FVLLEA-SGN-IS--L-------ES 242 (273)
T ss_dssp CCEEEEESSHHHHHHHHHHTCSEEEEET--------CCHHHHHHHHHHHHHHCT-TCEEEE-ESS-CC--T-------TT
T ss_pred ceEEEEcCCHHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCC-CcEEEE-ECC-CC--H-------HH
Confidence 4688889999999999999999999843 34677777666542 11 123334 455 42 1 45
Q ss_pred HHHHHHcCCCEEEEeeec
Q psy7930 88 CHQFVESGADGFVIGALT 105 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~ 105 (146)
|..+.+.|+|+|.+|.++
T Consensus 243 i~~~~~aGaD~i~vGs~i 260 (273)
T 2b7n_A 243 INAYAKSGVDAISVGALI 260 (273)
T ss_dssp HHHHHTTTCSEEECTHHH
T ss_pred HHHHHHcCCcEEEEcHHh
Confidence 778899999999999854
No 126
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=93.96 E-value=0.19 Score=41.41 Aligned_cols=72 Identities=18% Similarity=0.070 Sum_probs=49.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCC-----------CC-------CCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccC
Q psy7930 17 DSVASALAAVRGGADRLELCAA-----------LS-------EGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~-----------l~-------~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys 77 (146)
.+.+++..|.+.|||-|.+-.. -. ..+-.|+...++++++.+ ++||.+- || . .|
T Consensus 190 ~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~-----GG-I-~~ 262 (349)
T 1p0k_A 190 MSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIAS-----GG-L-QD 262 (349)
T ss_dssp CCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEE-----SS-C-CS
T ss_pred CCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEE-----CC-C-CC
Confidence 5799999999999999999532 00 122334566778887776 7887542 44 2 22
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
. +|+..+..+|||+|.+|
T Consensus 263 ~-------~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 263 A-------LDVAKAIALGASCTGMA 280 (349)
T ss_dssp H-------HHHHHHHHTTCSEEEEC
T ss_pred H-------HHHHHHHHcCCCEEEEc
Confidence 2 56667777899999999
No 127
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.96 E-value=0.17 Score=42.26 Aligned_cols=69 Identities=17% Similarity=0.154 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCC---------CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTP---------TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTP---------S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
.+-+..+++.|+|-|.+-..-..+|++| .+.+++.+++.+ ++||.+ -|| ..|.++.+.
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia-----nGg--I~s~eda~~----- 214 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVT-----NGG--IRSLEEALF----- 214 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEE-----ESS--CCSHHHHHH-----
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEE-----ECC--cCCHHHHHH-----
Confidence 4556788999999999876444345554 478899999988 898753 244 334555444
Q ss_pred HHHHHcCCCEEEEe
Q psy7930 89 HQFVESGADGFVIG 102 (146)
Q Consensus 89 ~~~~~~GadG~VfG 102 (146)
+.+ |||||.+|
T Consensus 215 --~l~-GaD~V~iG 225 (350)
T 3b0p_A 215 --HLK-RVDGVMLG 225 (350)
T ss_dssp --HHT-TSSEEEEC
T ss_pred --HHh-CCCEEEEC
Confidence 334 99999998
No 128
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=93.86 E-value=0.17 Score=41.60 Aligned_cols=72 Identities=18% Similarity=0.102 Sum_probs=51.4
Q ss_pred cCHHHHHHHHHcCCCEEEecCCC-----------C---------CCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcc
Q psy7930 17 DSVASALAAVRGGADRLELCAAL-----------S---------EGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l-----------~---------~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~ 75 (146)
.+.+++..+++.|+|-|.+-..- . ..+-.|+...+.++++.+ ++||... || ..
T Consensus 193 ~~~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~-----GG-I~ 266 (332)
T 1vcf_A 193 LSREAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVAS-----GG-VY 266 (332)
T ss_dssp CCHHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEE-----SS-CC
T ss_pred CCHHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEE-----CC-CC
Confidence 68899999999999999995431 0 122236677788888888 7887552 44 22
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 76 FSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
|. .|+..+..+|||+|.+|
T Consensus 267 -~~-------~d~~kal~~GAd~V~ig 285 (332)
T 1vcf_A 267 -TG-------TDGAKALALGADLLAVA 285 (332)
T ss_dssp -SH-------HHHHHHHHHTCSEEEEC
T ss_pred -CH-------HHHHHHHHhCCChHhhh
Confidence 22 46666777899999998
No 129
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=93.72 E-value=0.15 Score=42.61 Aligned_cols=78 Identities=24% Similarity=0.247 Sum_probs=58.7
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
..+||=|+|++++..|.++|||.|=|= + .+.+.++++.+...- ++.|-. .||== .+.|+
T Consensus 210 ~~ieVEvdtlde~~eAl~aGaD~I~LD-n-------~~~~~l~~av~~i~~--~v~iea-SGGI~----------~~~i~ 268 (298)
T 3gnn_A 210 VPVQIEVETLDQLRTALAHGARSVLLD-N-------FTLDMMRDAVRVTEG--RAVLEV-SGGVN----------FDTVR 268 (298)
T ss_dssp CCCEEEESSHHHHHHHHHTTCEEEEEE-S-------CCHHHHHHHHHHHTT--SEEEEE-ESSCS----------TTTHH
T ss_pred CCEEEEeCCHHHHHHHHHcCCCEEEEC-C-------CCHHHHHHHHHHhCC--CCeEEE-EcCCC----------HHHHH
Confidence 457888999999999999999998774 3 466888888775521 344555 56631 24577
Q ss_pred HHHHcCCCEEEEeeecCCC
Q psy7930 90 QFVESGADGFVIGALTGEQ 108 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg 108 (146)
.+.+.|+|+|.+|.|+.+-
T Consensus 269 ~~a~tGVD~isvG~lt~sa 287 (298)
T 3gnn_A 269 AIAETGVDRISIGALTKDV 287 (298)
T ss_dssp HHHHTTCSEEECGGGGTSC
T ss_pred HHHHcCCCEEEECCeecCC
Confidence 7889999999999998764
No 130
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.71 E-value=0.41 Score=36.60 Aligned_cols=98 Identities=5% Similarity=-0.077 Sum_probs=63.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCC----C----CCCC---HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEG----G----LTPT---LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~G----G----lTPS---~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+.+..+.+.|.+-|||...-..+ | ...+ ..-++...+..++.+..+--+ .. .-.+.+++-|
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~-------~~~~~~~~~i 97 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VA-------EKSSDWEKMF 97 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CC-------SSTTHHHHHH
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CC-------ccHHHHHHHH
Confidence 34557889999999998643211 1 1223 344555555668887666544 22 1234578899
Q ss_pred HHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 89 HQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+.++++|++-+|+.. | .+.++++.+.|+ |+.+.+|=-
T Consensus 98 ~~A~~lGa~~v~~~~----~---~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 98 KFAKAMDLEFITCEP----A---LSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HHHHHTTCSEEEECC----C---GGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHcCCCEEEecC----C---HHHHHHHHHHHHHhCCEEEEEeC
Confidence 999999999999973 2 245567777765 677776643
No 131
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=93.70 E-value=0.14 Score=41.37 Aligned_cols=83 Identities=14% Similarity=-0.021 Sum_probs=52.8
Q ss_pred eeEEEecCHHHH----HHHHHcCCC---EEEecCC--CCCC----CCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcc
Q psy7930 11 TLEVCVDSVASA----LAAVRGGAD---RLELCAA--LSEG----GLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 11 ~lEvcv~s~~~a----~~A~~~GAd---RIELc~~--l~~G----GlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~ 75 (146)
..-+...++++. ..+.+.|+| -|||+-+ ...| |-+|. ..+++.+++.+++||.|.++| -
T Consensus 97 ~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~-~----- 170 (314)
T 2e6f_A 97 FLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPP-Y----- 170 (314)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECC-C-----
T ss_pred EEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECC-C-----
Confidence 334555565544 445677999 9999742 1123 11221 347888888889999999999 2
Q ss_pred cCHHHHHHHHHHHHHHHHcC-CCEEEEe
Q psy7930 76 FSQAEKEIMALDCHQFVESG-ADGFVIG 102 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~G-adG~VfG 102 (146)
++.+++..+ .+.+.++| +|+|++-
T Consensus 171 ~~~~~~~~~---a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 FDIAHFDTA---AAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CCHHHHHHH---HHHHHTCTTEEEEEEC
T ss_pred CCHHHHHHH---HHHHHhcCCceEEEEe
Confidence 255444333 55678899 9999853
No 132
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=93.69 E-value=0.76 Score=35.71 Aligned_cols=111 Identities=14% Similarity=-0.011 Sum_probs=63.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCC---CCCCCHH---HHHHHHhhCCCcEEEEEccCCCCCccc---CHH----HHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEG---GLTPTLG---LYRVIKRLVLVPVFVMIRVRAGFDFVF---SQA----EKEIMAL 86 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~G---GlTPS~g---~i~~~~~~~~ipv~vMIRP~R~gdF~Y---s~~----E~~~M~~ 86 (146)
+.+..+.+.|.+-|||....... -...+.. -++...+..++.+..+--| -...|.. +++ -++.+++
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~l~~~d~~~r~~~~~~~~~ 112 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLS-AHRRFPLGSEDDAVRAQGLEIMRK 112 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEG-GGGTSCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecC-cccCCCCCCCCHHHHHHHHHHHHH
Confidence 34556778899999998532100 0112333 3444445568888765433 1111212 122 3678999
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcC--------HHHHHHHHHHhC--CCCeEEee
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEID--------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD--------~~~~~~Li~~a~--~~~vtFHR 131 (146)
-|+.++++|++-+|+.........+ .+.++++.+.|+ |+.+.+|=
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 167 (295)
T 3cqj_A 113 AIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEI 167 (295)
T ss_dssp HHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEee
Confidence 9999999999999885322101111 245666666665 67777764
No 133
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.49 E-value=0.055 Score=42.03 Aligned_cols=71 Identities=10% Similarity=0.021 Sum_probs=49.7
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCC--CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 18 SVASALAAVRGGADRLELCAALSE--GGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~--GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
..+-+..++++||+.|++-. +.. .+..+....+++++ ..++||.++ | +..+.+ |++.+.+.|
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d-~~~~~~~~~~~~~~i~~i~-~~~ipvi~~------G-gi~~~~-------~~~~~~~~G 95 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVD-LSNAIENSGENLPVLEKLS-EFAEHIQIG------G-GIRSLD-------YAEKLRKLG 95 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEE-HHHHHHCCCTTHHHHHHGG-GGGGGEEEE------S-SCCSHH-------HHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEEec-ccccccCCchhHHHHHHHH-hcCCcEEEE------C-CCCCHH-------HHHHHHHCC
Confidence 34567788999999999853 222 24446788888888 778998664 2 333333 566677789
Q ss_pred CCEEEEeee
Q psy7930 96 ADGFVIGAL 104 (146)
Q Consensus 96 adG~VfG~L 104 (146)
|||+++|-.
T Consensus 96 ad~V~lg~~ 104 (241)
T 1qo2_A 96 YRRQIVSSK 104 (241)
T ss_dssp CCEEEECHH
T ss_pred CCEEEECch
Confidence 999999865
No 134
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=93.46 E-value=0.088 Score=43.56 Aligned_cols=74 Identities=24% Similarity=0.199 Sum_probs=54.2
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC-----CcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL-----VPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~-----ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
..+++-++|++++..|.+.|||.|=|-+ .+...++++++.++ +||. . -|| ...
T Consensus 198 ~~i~vev~tlee~~~A~~aGaD~I~ld~--------~~~~~l~~~v~~l~~~~~~~~I~----A-SGG-It~-------- 255 (299)
T 2jbm_A 198 LKVEVECSSLQEAVQAAEAGADLVLLDN--------FKPEELHPTATVLKAQFPSVAVE----A-SGG-ITL-------- 255 (299)
T ss_dssp SCEEEEESSHHHHHHHHHTTCSEEEEES--------CCHHHHHHHHHHHHHHCTTSEEE----E-ESS-CCT--------
T ss_pred CeEEEecCCHHHHHHHHHcCCCEEEECC--------CCHHHHHHHHHHhhccCCCeeEE----E-ECC-CCH--------
Confidence 4678888999999999999999999843 34677777666542 4443 4 344 422
Q ss_pred HHHHHHHHHcCCCEEEEeeecC
Q psy7930 85 ALDCHQFVESGADGFVIGALTG 106 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~L~~ 106 (146)
+.|+.+.+.|+|+|.+|.++.
T Consensus 256 -~ni~~~~~aGaD~i~vGs~i~ 276 (299)
T 2jbm_A 256 -DNLPQFCGPHIDVISMGMLTQ 276 (299)
T ss_dssp -TTHHHHCCTTCCEEECTHHHH
T ss_pred -HHHHHHHHCCCCEEEEChhhc
Confidence 457788899999999998653
No 135
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=93.45 E-value=0.17 Score=39.15 Aligned_cols=98 Identities=13% Similarity=0.131 Sum_probs=65.0
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCccc----------CHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVF----------SQAEKEIMA 85 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y----------s~~E~~~M~ 85 (146)
+.+.+++..+.+.|||.+-+-+.+- +...+++.+ +..+-.+.+.+-+ +.| .++ +..|+
T Consensus 82 i~~~~~~~~~~~~Gad~V~lg~~~l-----~~p~~~~~~-~~~g~~i~~~~d~-~~~-~v~~~g~~~~~~~~~~e~---- 149 (241)
T 1qo2_A 82 IRSLDYAEKLRKLGYRRQIVSSKVL-----EDPSFLKSL-REIDVEPVFSLDT-RGG-RVAFKGWLAEEEIDPVSL---- 149 (241)
T ss_dssp CCSHHHHHHHHHTTCCEEEECHHHH-----HCTTHHHHH-HTTTCEEEEEEEE-ETT-EECCTTCSSCSCCCHHHH----
T ss_pred CCCHHHHHHHHHCCCCEEEECchHh-----hChHHHHHH-HHcCCcEEEEEEe-cCC-EEEECCceecCCCCHHHH----
Confidence 4678999999999999997765321 233567777 5554335555666 433 333 43443
Q ss_pred HHHHHHHHcCCCEEEEeeecCCC---CcCHHHHHHHHHHhCCCCeE
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQ---EIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg---~iD~~~~~~Li~~a~~~~vt 128 (146)
++.+.++|++.|++--.+.|| .+|.+.++++.+.. +.|+.
T Consensus 150 --~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~-~iPvi 192 (241)
T 1qo2_A 150 --LKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA-EVKVL 192 (241)
T ss_dssp --HHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH-TCEEE
T ss_pred --HHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc-CCcEE
Confidence 345667999999986665554 27999999998876 45554
No 136
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.43 E-value=0.4 Score=41.59 Aligned_cols=69 Identities=19% Similarity=0.296 Sum_probs=49.4
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCC-CCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLT-PTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlT-PS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+..+.+..+.++|+|.|+|..+. |.. .....++.+++.+ ++||.+- + +-+. ++++.+.++
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~---G~~~~~~~~i~~i~~~~~~~pvi~~-------~-v~t~-------~~a~~l~~a 316 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQ---GNSVYQIAMVHYIKQKYPHLQVIGG-------N-VVTA-------AQAKNLIDA 316 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC---CCSHHHHHHHHHHHHHCTTCEEEEE-------E-ECSH-------HHHHHHHHH
T ss_pred hhHHHHHHHHHcCCCEEEeeccC---CcchhHHHHHHHHHHhCCCCceEec-------c-cchH-------HHHHHHHHc
Confidence 34688889999999999997642 322 1357789998888 7888651 0 1122 347888899
Q ss_pred CCCEEEEee
Q psy7930 95 GADGFVIGA 103 (146)
Q Consensus 95 GadG~VfG~ 103 (146)
|+|+|++|.
T Consensus 317 Gad~I~vg~ 325 (514)
T 1jcn_A 317 GVDGLRVGM 325 (514)
T ss_dssp TCSEEEECS
T ss_pred CCCEEEECC
Confidence 999999964
No 137
>4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B
Probab=93.40 E-value=0.05 Score=46.66 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=44.9
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
.||..+-+++.++++.++++|+|||++=.-..+...| ..+..++++|. ++.+.||-
T Consensus 96 ~ysS~D~~v~~~hi~~ak~aGIDgfal~w~~~~~~~d-~~l~~~~~aA~~~g~k~~f~~ 153 (382)
T 4acy_A 96 TYSSNDPEIIRKHIRMHIKANVGVLSVTWWGESDYGN-QSVSLLLDEAAKVGAKVCFHI 153 (382)
T ss_dssp SCCTTCHHHHHHHHHHHHHHTEEEEEEEECGGGGTTC-HHHHHHHHHHHHHTCEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHcCCCEEEEEecCCCCchH-HHHHHHHHHHHHcCCEEEEEe
Confidence 4777778999999999999999999998754444456 57788888887 78887763
No 138
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=93.40 E-value=0.46 Score=36.48 Aligned_cols=109 Identities=12% Similarity=0.008 Sum_probs=64.5
Q ss_pred HHHHHHHHcCCCEEEecCCCCCC--CCCCCHHH---HHHHHhhCCCcEEEEEccCCCCCcccC----HHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEG--GLTPTLGL---YRVIKRLVLVPVFVMIRVRAGFDFVFS----QAEKEIMALDCHQ 90 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~G--GlTPS~g~---i~~~~~~~~ipv~vMIRP~R~gdF~Ys----~~E~~~M~~dI~~ 90 (146)
+.+..|.+.|.+-|||...-..+ ....+... ++...+..+++...+--| -..++.-+ +.-++.+++.|+.
T Consensus 18 ~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~-~~~~l~s~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 18 GAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHAS-YLVNLGAEGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECC-TTCCTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecC-cccCCCCCHHHHHHHHHHHHHHHHH
Confidence 34567888999999995421111 11122334 444445567733334445 33233211 2357889999999
Q ss_pred HHHcCCCEEEE--eeecCCCCcCHHHHHHHHHHhC---CCCeEEee
Q psy7930 91 FVESGADGFVI--GALTGEQEIDIEFIRQLKTIIG---DRPITFHR 131 (146)
Q Consensus 91 ~~~~GadG~Vf--G~L~~dg~iD~~~~~~Li~~a~---~~~vtFHR 131 (146)
++++|++.+|+ |.. .+ ..=.+.++++.+.|. ++.+.++-
T Consensus 97 a~~lGa~~vv~h~g~~-~~-~~~~~~l~~l~~~a~~~~gv~l~lEn 140 (270)
T 3aam_A 97 AALLGVEYVVVHPGSG-RP-ERVKEGALKALRLAGVRSRPVLLVEN 140 (270)
T ss_dssp HHHHTCCEEEECCCBS-CH-HHHHHHHHHHHHHHTCCSSSEEEEEC
T ss_pred HHHcCCCEEEECCCCC-CH-HHHHHHHHHHHHhhcccCCCEEEEec
Confidence 99999999998 443 11 223466778888885 56665543
No 139
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.38 E-value=0.48 Score=40.23 Aligned_cols=93 Identities=16% Similarity=0.181 Sum_probs=59.4
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+..+.+..+.++|+|-|++.+. +|.++. ...++.+++.. ++||.+ ..+-|.+ +++.+.++
T Consensus 108 ~~~~~~~~lieaGvd~I~idta---~G~~~~~~~~I~~ik~~~p~v~Vi~--------G~v~t~e-------~A~~a~~a 169 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSS---HGHSEGVLQRIRETRAAYPHLEIIG--------GNVATAE-------GARALIEA 169 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECS---CTTSHHHHHHHHHHHHHCTTCEEEE--------EEECSHH-------HHHHHHHH
T ss_pred hHHHHHHHHHhCCCCEEEEeCC---CCCCHHHHHHHHHHHHhcCCCceEe--------eeeCCHH-------HHHHHHHc
Confidence 4578899999999999999643 344332 34566777766 667643 1344544 45667788
Q ss_pred CCCEEEEeeecC-----------CCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 95 GADGFVIGALTG-----------EQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 95 GadG~VfG~L~~-----------dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
|||++++|. .+ -|.-+...+.++.++++ +.|+.
T Consensus 170 GAD~I~vG~-gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVI 215 (366)
T 4fo4_A 170 GVSAVKVGI-GPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVI 215 (366)
T ss_dssp TCSEEEECS-SCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEE
T ss_pred CCCEEEEec-CCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEE
Confidence 999999972 21 12345566667666554 45543
No 140
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=93.37 E-value=0.2 Score=43.93 Aligned_cols=72 Identities=21% Similarity=0.330 Sum_probs=51.5
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCCC----------CCCHHHHHHHHhh---CCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGGL----------TPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GGl----------TPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.+.+.+..++++|||-|-+-.. .|+. .|....+.++.+. .++||.. -|| -.+.
T Consensus 279 ~v~t~e~a~~l~~aGaD~I~Vg~g--~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa-----~GG-I~~~---- 346 (496)
T 4fxs_A 279 NVATAEGARALIEAGVSAVKVGIG--PGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIA-----DGG-IRFS---- 346 (496)
T ss_dssp EECSHHHHHHHHHHTCSEEEECSS--CCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEE-----ESC-CCSH----
T ss_pred ccCcHHHHHHHHHhCCCEEEECCC--CCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEE-----eCC-CCCH----
Confidence 478899999999999999986421 2222 4667777777764 3788754 233 3332
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
.||..+.++|||++.+|
T Consensus 347 ----~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 347 ----GDISKAIAAGASCVMVG 363 (496)
T ss_dssp ----HHHHHHHHTTCSEEEES
T ss_pred ----HHHHHHHHcCCCeEEec
Confidence 57777788999999999
No 141
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.35 E-value=0.25 Score=38.27 Aligned_cols=72 Identities=21% Similarity=0.278 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCC----CHHHHHHHHhhCCCc--EEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTP----TLGLYRVIKRLVLVP--VFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTP----S~g~i~~~~~~~~ip--v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
.+.+..+.++|||-|+|-- ..|...| +...++++++.++.| +++||.. . .+.++.+.
T Consensus 22 ~~~i~~~~~~Gad~i~l~i--~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d-~--------------~~~i~~~~ 84 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDI--MDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTN-P--------------SDYVEPLA 84 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEE--EBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSC-G--------------GGGHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEE--ecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecC-H--------------HHHHHHHH
Confidence 3667788899999999884 1243334 378999998877654 5588876 3 23467778
Q ss_pred HcCCCEEEEeeecCC
Q psy7930 93 ESGADGFVIGALTGE 107 (146)
Q Consensus 93 ~~GadG~VfG~L~~d 107 (146)
+.|+||+.|-....+
T Consensus 85 ~agad~v~vH~~~~~ 99 (228)
T 1h1y_A 85 KAGASGFTFHIEVSR 99 (228)
T ss_dssp HHTCSEEEEEGGGCT
T ss_pred HcCCCEEEECCCCcc
Confidence 889999988876655
No 142
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.27 E-value=0.36 Score=36.99 Aligned_cols=78 Identities=14% Similarity=0.040 Sum_probs=52.9
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCCCCC---CC--CCCHHHHHHHHhh--CCCcEEEEEccCCCCCcccCHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAALSEG---GL--TPTLGLYRVIKRL--VLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~G---Gl--TPS~g~i~~~~~~--~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
..++=+-+.|.+++..|. .|||-|=+-.-...+ |. +.....++.+++. .++||+.. || -. .
T Consensus 88 ~~~ig~s~~t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai-----GG-I~--~--- 155 (210)
T 3ceu_A 88 AGHVSCSCHSVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL-----GG-IN--E--- 155 (210)
T ss_dssp CSEEEEEECSHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEE-----SS-CC--T---
T ss_pred CCEEEEecCCHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE-----CC-CC--H---
Confidence 345667788999999998 999998763222111 12 3356788888876 68998764 33 11 1
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
+++..+.+.|++||.+|
T Consensus 156 ----~nv~~~~~~Ga~gVav~ 172 (210)
T 3ceu_A 156 ----DNLLEIKDFGFGGAVVL 172 (210)
T ss_dssp ----TTHHHHHHTTCSEEEES
T ss_pred ----HHHHHHHHhCCCEEEEh
Confidence 26777888999999886
No 143
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=93.24 E-value=0.28 Score=43.30 Aligned_cols=70 Identities=21% Similarity=0.278 Sum_probs=51.3
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCC-----CCCHHHHHHHHhhC-------CCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGL-----TPTLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGl-----TPS~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
+.+.++|..|++.|||-|-+-. .||+ .|+...+.++++.+ ++||.+. || .. +.
T Consensus 351 v~~~e~A~~a~~aGad~I~vs~---hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~-----GG-I~-~g----- 415 (511)
T 1kbi_A 351 VQRTEDVIKAAEIGVSGVVLSN---HGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD-----GG-VR-RG----- 415 (511)
T ss_dssp ECSHHHHHHHHHTTCSEEEECC---TTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE-----SS-CC-SH-----
T ss_pred CCCHHHHHHHHHcCCCEEEEcC---CCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE-----CC-CC-CH-----
Confidence 4579999999999999999943 2553 45677777777765 6787552 33 22 22
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q psy7930 84 MALDCHQFVESGADGFVIG 102 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+|||+|.+|
T Consensus 416 --~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 416 --TDVLKALCLGAKGVGLG 432 (511)
T ss_dssp --HHHHHHHHHTCSEEEEC
T ss_pred --HHHHHHHHcCCCEEEEC
Confidence 56777778999999998
No 144
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=93.22 E-value=0.28 Score=41.36 Aligned_cols=72 Identities=22% Similarity=0.311 Sum_probs=49.1
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCC---------CC-CCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEG---------GL-TPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~G---------Gl-TPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
.+.+.+.+..|++.|||-|-+ + ...| |. .|....+..+.+ ..++||.. -|| . .+.
T Consensus 201 ~v~~~~~a~~a~~~Gad~I~v-g-~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia-----~GG-I-~~~--- 268 (404)
T 1eep_A 201 NIVTKEAALDLISVGADCLKV-G-IGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIA-----DGG-I-RFS--- 268 (404)
T ss_dssp EECSHHHHHHHHTTTCSEEEE-C-SSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEE-----ESC-C-CSH---
T ss_pred CCCcHHHHHHHHhcCCCEEEE-C-CCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEE-----ECC-C-CCH---
Confidence 467899999999999999998 3 2211 11 355566666665 45778754 233 1 122
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+|||+|.+|
T Consensus 269 ----~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 269 ----GDVVKAIAAGADSVMIG 285 (404)
T ss_dssp ----HHHHHHHHHTCSEEEEC
T ss_pred ----HHHHHHHHcCCCHHhhC
Confidence 57777888999999996
No 145
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=93.19 E-value=1.2 Score=34.47 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=67.0
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEc--cCC---CCCcccCHH-----HHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIR--VRA---GFDFVFSQA-----EKEIMALDCHQ 90 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIR--P~R---~gdF~Ys~~-----E~~~M~~dI~~ 90 (146)
.+..+.+.|.+-|||...-. ......-++...+..++++..+-- | . ..+|.-.+. -++.+++-|+.
T Consensus 46 ~l~~~~~~G~~~vEl~~~~~---~~~~~~~~~~~l~~~gl~~~~~~~~~p-~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 121 (290)
T 2zvr_A 46 GMELAKRVGYQAVEIAVRDP---SIVDWNEVKILSEELNLPICAIGTGQA-YLADGLSLTHPNDEIRKKAIERVVKHTEV 121 (290)
T ss_dssp HHHHHHHHTCSEEEEECSCG---GGSCHHHHHHHHHHHTCCEEEEECTHH-HHTTCCCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEcCCCc---chhhHHHHHHHHHHcCCeEEEEeccCc-cccCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35667889999999986411 113466677777777888866544 4 3 334442222 26889999999
Q ss_pred HHHcCCCEEEEeeecC-CCCcC--------HHHHHHHHHHhCCCCeEEe
Q psy7930 91 FVESGADGFVIGALTG-EQEID--------IEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 91 ~~~~GadG~VfG~L~~-dg~iD--------~~~~~~Li~~a~~~~vtFH 130 (146)
++++|++-+| +.... ....+ .+.++++.+.|+.+.+.+|
T Consensus 122 A~~lG~~~v~-~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lE 169 (290)
T 2zvr_A 122 AGMFGALVII-GLVRGRREGRSYEETEELFIESMKRLLELTEHAKFVIE 169 (290)
T ss_dssp HHHHTCEEEE-SGGGCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEEC
T ss_pred HHHcCCCEEE-ecCCCCCCCcCHHHHHHHHHHHHHHHHHHhccCEEEEE
Confidence 9999999988 44211 11122 3456677777766666665
No 146
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.16 E-value=0.43 Score=37.41 Aligned_cols=68 Identities=22% Similarity=0.219 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCC----CCCHHHHHHHHhhCCCc--EEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGL----TPTLGLYRVIKRLVLVP--VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGl----TPS~g~i~~~~~~~~ip--v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+.+..+.++|||-++|=- .-|.. |-...+++++++.+++| ++.||-- . .+-++.+.+
T Consensus 21 ~~i~~~~~~Gad~ihldi--~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~d-p--------------~~~i~~~~~ 83 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDV--MDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVE-P--------------EKYVEDFAK 83 (230)
T ss_dssp HHHHHHHHTTCSEEEEEE--EBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEESSS-G--------------GGTHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEE--EecCCCcchhhhHHHHHHHHhhcCCcEEEEEEccC-H--------------HHHHHHHHH
Confidence 556677889999998864 12333 33457899998877666 4588854 2 235678889
Q ss_pred cCCCEEEEeee
Q psy7930 94 SGADGFVIGAL 104 (146)
Q Consensus 94 ~GadG~VfG~L 104 (146)
+||||+.|+..
T Consensus 84 aGadgv~vh~e 94 (230)
T 1tqj_A 84 AGADIISVHVE 94 (230)
T ss_dssp HTCSEEEEECS
T ss_pred cCCCEEEECcc
Confidence 99999999976
No 147
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=93.15 E-value=0.54 Score=40.49 Aligned_cols=92 Identities=25% Similarity=0.321 Sum_probs=59.2
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
+.+.+..+.+.|+|.|+|-+. .|..+. ...++.+++..++||.+ . =+-|. ++++.+.++|+
T Consensus 145 ~~e~~~~lveaGvdvIvldta---~G~~~~~~e~I~~ik~~~~i~Vi~---g-----~V~t~-------e~A~~a~~aGA 206 (400)
T 3ffs_A 145 EIERAKLLVEAGVDVIVLDSA---HGHSLNIIRTLKEIKSKMNIDVIV---G-----NVVTE-------EATKELIENGA 206 (400)
T ss_dssp -CHHHHHHHHHTCSEEEECCS---CCSBHHHHHHHHHHHTTCCCEEEE---E-----EECSH-------HHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEeCC---CCCcccHHHHHHHHHhcCCCeEEE---e-----ecCCH-------HHHHHHHHcCC
Confidence 367889999999999998543 343222 57788888877888765 1 12233 34566778999
Q ss_pred CEEEEee------ecC----CCCcCHHHHHHHHHHhC--CCCe
Q psy7930 97 DGFVIGA------LTG----EQEIDIEFIRQLKTIIG--DRPI 127 (146)
Q Consensus 97 dG~VfG~------L~~----dg~iD~~~~~~Li~~a~--~~~v 127 (146)
|+|++|. -+. -|.-+...+.++.++++ +.|+
T Consensus 207 D~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPV 249 (400)
T 3ffs_A 207 DGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPI 249 (400)
T ss_dssp SEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCE
T ss_pred CEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCE
Confidence 9999973 111 12335667777777764 3444
No 148
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.03 E-value=1.2 Score=36.23 Aligned_cols=111 Identities=14% Similarity=0.020 Sum_probs=67.2
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCC------CCCCC--CHHHHHHHHh---hCCCcEEEEEccCCCC--C-cccCHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSE------GGLTP--TLGLYRVIKR---LVLVPVFVMIRVRAGF--D-FVFSQAE 80 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~------GGlTP--S~g~i~~~~~---~~~ipv~vMIRP~R~g--d-F~Ys~~E 80 (146)
.+.+.+++..|.++|+++|-+....+. =+.|+ +...++.+.+ ..++.|.+=|-- -.| + -.++.++
T Consensus 82 l~~~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~-~~~~e~~~~~~~~~ 160 (302)
T 2ftp_A 82 LAPNLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISC-VLGCPYDGDVDPRQ 160 (302)
T ss_dssp ECCSHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC-TTCBTTTBCCCHHH
T ss_pred EeCCHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEE-EeeCCcCCCCCHHH
Confidence 346899999999999999998632110 01111 1122222222 235665443322 111 1 1344554
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC----CCCeEEee
Q psy7930 81 KEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG----DRPITFHR 131 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~----~~~vtFHR 131 (146)
+. +=++.+.++|+|.|.+. +-.|........++++..+ +.++.||=
T Consensus 161 ~~---~~~~~~~~~G~d~i~l~--DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~ 210 (302)
T 2ftp_A 161 VA---WVARELQQMGCYEVSLG--DTIGVGTAGATRRLIEAVASEVPRERLAGHF 210 (302)
T ss_dssp HH---HHHHHHHHTTCSEEEEE--ESSSCCCHHHHHHHHHHHTTTSCGGGEEEEE
T ss_pred HH---HHHHHHHHcCCCEEEEe--CCCCCcCHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 44 44566778899999988 7778888888888887765 36788883
No 149
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=93.00 E-value=0.18 Score=40.57 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=50.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.+.+-+.++.++|||=|||-. ..|.|. ...+++++++ .++|+..|.-- - ..| +.
T Consensus 21 ~t~~~~~~l~~~GaD~IelG~---S~g~t~~~~~~~v~~ir~-~~~Pivl~~y~-~-n~i------------------~~ 76 (234)
T 2f6u_A 21 NTDEIIKAVADSGTDAVMISG---TQNVTYEKARTLIEKVSQ-YGLPIVVEPSD-P-SNV------------------VY 76 (234)
T ss_dssp CCHHHHHHHHTTTCSEEEECC---CTTCCHHHHHHHHHHHTT-SCCCEEECCSS-C-CCC------------------CC
T ss_pred ccHHHHHHHHHcCCCEEEECC---CCCCCHHHHHHHHHHhcC-CCCCEEEecCC-c-chh------------------hc
Confidence 346678888999999999986 378887 5778888887 78999776422 0 223 77
Q ss_pred CCCEEEEeeecCCC
Q psy7930 95 GADGFVIGALTGEQ 108 (146)
Q Consensus 95 GadG~VfG~L~~dg 108 (146)
|+||+.|=-|-.+.
T Consensus 77 gvDg~iipdLp~ee 90 (234)
T 2f6u_A 77 DVDYLFVPTVLNSA 90 (234)
T ss_dssp CSSEEEEEEETTBS
T ss_pred CCCEEEEcccCCCC
Confidence 99999988776544
No 150
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=92.95 E-value=0.43 Score=39.51 Aligned_cols=65 Identities=23% Similarity=0.286 Sum_probs=45.8
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFV 100 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V 100 (146)
.+..|.+.|||-|-.- .|| ..++++++...+||.+ .||.=. +++|+-. .++.+.++||+|++
T Consensus 194 aariA~elGAD~VKt~-------~t~--e~~~~vv~~~~vPVv~-----~GG~~~-~~~~~l~---~v~~ai~aGA~Gv~ 255 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTY-------YVE--KGFERIVAGCPVPIVI-----AGGKKL-PEREALE---MCWQAIDQGASGVD 255 (295)
T ss_dssp HHHHHHHTTCSEEEEE-------CCT--TTHHHHHHTCSSCEEE-----ECCSCC-CHHHHHH---HHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCCEEEeC-------CCH--HHHHHHHHhCCCcEEE-----EECCCC-CHHHHHH---HHHHHHHhCCeEEE
Confidence 6788999999998775 222 3478888888899753 356433 5555544 45555578999999
Q ss_pred Eee
Q psy7930 101 IGA 103 (146)
Q Consensus 101 fG~ 103 (146)
+|=
T Consensus 256 vGR 258 (295)
T 3glc_A 256 MGR 258 (295)
T ss_dssp ESH
T ss_pred eHH
Confidence 993
No 151
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=92.89 E-value=0.5 Score=38.31 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=68.1
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCC------CCCC--CHHH----HHHHHhhCCCcEEEEEccCC---CCCcccCH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEG------GLTP--TLGL----YRVIKRLVLVPVFVMIRVRA---GFDFVFSQ 78 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~G------GlTP--S~g~----i~~~~~~~~ipv~vMIRP~R---~gdF~Ys~ 78 (146)
+.+.+..++..|.++|+++|-+....+.- +.|+ +... ++.+++ .+++|.+=|-- - .-...++.
T Consensus 78 ~l~~~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~-~G~~v~~~l~~-~~~~~~~~~~~~ 155 (298)
T 2cw6_A 78 VLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS-ANISVRGYVSC-ALGCPYEGKISP 155 (298)
T ss_dssp EECCSHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH-TTCEEEEEEET-TTCBTTTBSCCH
T ss_pred EEcCCHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEE-EeeCCcCCCCCH
Confidence 34568999999999999999987543211 1221 1122 333322 36666543321 1 11123556
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC----CCCeEEe
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG----DRPITFH 130 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~----~~~vtFH 130 (146)
+++..+ ++.+.++|++.|.+. +.-|........++++..+ +.++-||
T Consensus 156 ~~~~~~---~~~~~~~Ga~~i~l~--DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H 206 (298)
T 2cw6_A 156 AKVAEV---TKKFYSMGCYEISLG--DTIGVGTPGIMKDMLSAVMQEVPLAALAVH 206 (298)
T ss_dssp HHHHHH---HHHHHHTTCSEEEEE--ETTSCCCHHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHH---HHHHHHcCCCEEEec--CCCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 555544 567788999988877 6678888888888877764 4667777
No 152
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.74 E-value=0.44 Score=38.61 Aligned_cols=95 Identities=24% Similarity=0.298 Sum_probs=61.1
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCC-------------------------CCCC-------CCCCHHHHHHHHhhCCCc
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAAL-------------------------SEGG-------LTPTLGLYRVIKRLVLVP 61 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l-------------------------~~GG-------lTPS~g~i~~~~~~~~ip 61 (146)
+.+.|++++..+.+.|||-|-+-... ...+ ..++..+++++++..++|
T Consensus 130 ~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iP 209 (305)
T 2nv1_A 130 CGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLP 209 (305)
T ss_dssp EEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCS
T ss_pred EEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCC
Confidence 56778999999999999988774311 0011 235678888888888889
Q ss_pred EEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee-ecCCCCcCH-HHHHHHHHHh
Q psy7930 62 VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA-LTGEQEIDI-EFIRQLKTII 122 (146)
Q Consensus 62 v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~-L~~dg~iD~-~~~~~Li~~a 122 (146)
|.+. . -|| ..|.+ |+..+.++|||||++|= +-..+ |. ..++++++..
T Consensus 210 vi~~--a-~GG--I~~~~-------d~~~~~~~GadgV~vGsai~~~~--~p~~~~~~l~~~~ 258 (305)
T 2nv1_A 210 VVNF--A-AGG--VATPA-------DAALMMQLGADGVFVGSGIFKSD--NPAKFAKAIVEAT 258 (305)
T ss_dssp SCEE--B-CSC--CCSHH-------HHHHHHHTTCSCEEECGGGGGSS--CHHHHHHHHHHHH
T ss_pred EEEE--e-ccC--CCCHH-------HHHHHHHcCCCEEEEcHHHHcCC--CHHHHHHHHHHHH
Confidence 7421 2 345 33443 46667779999999992 22222 32 4666666544
No 153
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=92.74 E-value=0.02 Score=44.76 Aligned_cols=68 Identities=18% Similarity=0.239 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCC--CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLT--PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlT--PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+-+..+++.|++.|=+. +....|+. |...+++++++.+++||.. -|| ..|. +|+..+.++|+|
T Consensus 160 ~~a~~~~~~G~~~i~~t-~~~~~g~~~g~~~~~~~~i~~~~~iPvia-----~GG--I~~~-------~d~~~~~~~Gad 224 (247)
T 3tdn_A 160 DWVVEVEKRGAGEILLT-SIDRDGTKSGYDTEMIRFVRPLTTLPIIA-----SGG--AGKM-------EHFLEAFLRGAD 224 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCEEEEe-cccCCCCcCCCCHHHHHHHHHhCCCCEEE-----ECC--CCCH-------HHHHHHHHcCCc
Confidence 34566788899988654 34444443 5667888888888888754 233 1112 567777888999
Q ss_pred EEEEe
Q psy7930 98 GFVIG 102 (146)
Q Consensus 98 G~VfG 102 (146)
|+++|
T Consensus 225 ~v~vg 229 (247)
T 3tdn_A 225 KVSIN 229 (247)
T ss_dssp -----
T ss_pred Hhhcc
Confidence 99998
No 154
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.66 E-value=0.89 Score=39.06 Aligned_cols=67 Identities=21% Similarity=0.295 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+.+..+.++|+|.|++..+ .|..+ ....++.+++.. ++||.+ + ...+.+|. +.+.++|+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~---~G~~~~~~e~i~~i~~~~p~~pvi~---g-----~~~t~e~a-------~~l~~~G~ 300 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA---HGHSRRVIETLEMIKADYPDLPVVA---G-----NVATPEGT-------EALIKAGA 300 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS---CCSSHHHHHHHHHHHHHCTTSCEEE---E-----EECSHHHH-------HHHHHTTC
T ss_pred HHHHHHHHHhCCCEEEEEec---CCchHHHHHHHHHHHHHCCCceEEe---C-----CcCCHHHH-------HHHHHcCC
Confidence 67888899999999999654 24322 667888888887 688854 3 45565554 56678999
Q ss_pred CEEEEee
Q psy7930 97 DGFVIGA 103 (146)
Q Consensus 97 dG~VfG~ 103 (146)
|+|++|.
T Consensus 301 d~I~v~~ 307 (494)
T 1vrd_A 301 DAVKVGV 307 (494)
T ss_dssp SEEEECS
T ss_pred CEEEEcC
Confidence 9999964
No 155
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.55 E-value=0.69 Score=36.27 Aligned_cols=90 Identities=23% Similarity=0.262 Sum_probs=59.0
Q ss_pred CHHHH-HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 18 SVASA-LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 18 s~~~a-~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
+++.+ ..|++.|||-|-+.- +.....++++++.+++||.+ -||--.-+.+++.. .+..+.++|+
T Consensus 167 ~~~~~a~~a~~~Gad~i~~~~-------~~~~~~l~~i~~~~~ipvva-----~GGi~~~~~~~~~~---~~~~~~~~Ga 231 (273)
T 2qjg_A 167 LVAHAARLGAELGADIVKTSY-------TGDIDSFRDVVKGCPAPVVV-----AGGPKTNTDEEFLQ---MIKDAMEAGA 231 (273)
T ss_dssp HHHHHHHHHHHTTCSEEEECC-------CSSHHHHHHHHHHCSSCEEE-----ECCSCCSSHHHHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEECC-------CCCHHHHHHHHHhCCCCEEE-----EeCCCCCCHHHHHH---HHHHHHHcCC
Confidence 34555 889999999887652 24688999999888999865 35543324555444 3555668999
Q ss_pred CEEEEe-eecCCCCcCHHHHHHHHHHhC
Q psy7930 97 DGFVIG-ALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 97 dG~VfG-~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+|+.+| .+.....+ .+.+++|.+..+
T Consensus 232 ~gv~vg~~i~~~~~~-~~~~~~l~~~~~ 258 (273)
T 2qjg_A 232 AGVAVGRNIFQHDDV-VGITRAVCKIVH 258 (273)
T ss_dssp SEEECCHHHHTSSSH-HHHHHHHHHHHH
T ss_pred cEEEeeHHhhCCCCH-HHHHHHHHHHHh
Confidence 999998 34333322 355666665543
No 156
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=92.53 E-value=0.05 Score=42.04 Aligned_cols=69 Identities=17% Similarity=0.083 Sum_probs=47.6
Q ss_pred cCHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhC--CCcEEEE--EccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLV--LVPVFVM--IRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~--~ipv~vM--IRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
.|.+++..+.+.|+|-+-+.... ..+|...+...++.+++.. ++|+.|- |+| +.+..
T Consensus 120 ~T~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~~-----------------~~~~~ 182 (218)
T 3jr2_A 120 WTMQDAKAWVDLGITQAIYHRSRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVP-----------------EDIYL 182 (218)
T ss_dssp CCHHHHHHHHHTTCCEEEEECCHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCCG-----------------GGGGG
T ss_pred CCHHHHHHHHHcCccceeeeeccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCCH-----------------HHHHH
Confidence 46788999999999987663221 2246667777788777754 6676543 233 12345
Q ss_pred HHHcCCCEEEEe
Q psy7930 91 FVESGADGFVIG 102 (146)
Q Consensus 91 ~~~~GadG~VfG 102 (146)
+.++|||++|+|
T Consensus 183 ~~~aGAd~vvvG 194 (218)
T 3jr2_A 183 FEGIKTKTFIAG 194 (218)
T ss_dssp GTTSCEEEEEES
T ss_pred HHHcCCCEEEEc
Confidence 889999999999
No 157
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.40 E-value=0.11 Score=40.62 Aligned_cols=85 Identities=15% Similarity=0.173 Sum_probs=58.8
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+.|++++..|.+.|||-|-+=-.-..|| ...++.+++.+ ++|+. | -||= |. +.+..+.++
T Consensus 116 ~~t~~e~~~A~~~Gad~v~~Fpa~~~gG----~~~lk~i~~~~~~ipvv----a-iGGI---~~-------~n~~~~l~a 176 (214)
T 1wbh_A 116 ISTVSELMLGMDYGLKEFKFFPAEANGG----VKALQAIAGPFSQVRFC----P-TGGI---SP-------ANYRDYLAL 176 (214)
T ss_dssp ESSHHHHHHHHHTTCCEEEETTTTTTTH----HHHHHHHHTTCTTCEEE----E-BSSC---CT-------TTHHHHHTS
T ss_pred cCCHHHHHHHHHCCCCEEEEecCccccC----HHHHHHHhhhCCCCeEE----E-ECCC---CH-------HHHHHHHhc
Confidence 7889999999999999999932111222 67888888877 67774 4 4652 11 366778888
Q ss_pred -CCCEEEEeeecCCCCc---CHHHHHHHH
Q psy7930 95 -GADGFVIGALTGEQEI---DIEFIRQLK 119 (146)
Q Consensus 95 -GadG~VfG~L~~dg~i---D~~~~~~Li 119 (146)
|++|+..+.|.+...+ |.+.++++.
T Consensus 177 gg~~~v~gS~i~~~~~~~~~~~~~i~~~a 205 (214)
T 1wbh_A 177 KSVLCIGGSWLVPADALEAGDYDRITKLA 205 (214)
T ss_dssp TTBSCEEEGGGSCHHHHHHTCHHHHHHHH
T ss_pred CCCeEEEeccccChhhhhcCCHHHHHHHH
Confidence 9999998888865322 344444443
No 158
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.32 E-value=0.95 Score=37.51 Aligned_cols=91 Identities=10% Similarity=0.015 Sum_probs=57.0
Q ss_pred HHHHcCCCEEEecCCCCCCCCC-------C-CHHHHHHHHhh-CCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 24 AAVRGGADRLELCAALSEGGLT-------P-TLGLYRVIKRL-VLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 24 ~A~~~GAdRIELc~~l~~GGlT-------P-S~g~i~~~~~~-~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.-.+.|++.||+--.-..+|.+ + ....++.+++. .++|+.+|..| .-+. .++++.+.+.
T Consensus 38 ~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p-~~~~-----------~~~i~~a~~a 105 (345)
T 1nvm_A 38 ALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLP-GIGS-----------VHDLKNAYQA 105 (345)
T ss_dssp HHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECB-TTBC-----------HHHHHHHHHH
T ss_pred HHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecC-Cccc-----------HHHHHHHHhC
Confidence 3456799999994100112222 2 35566676665 37899999777 3221 3689999999
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEe
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFH 130 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFH 130 (146)
|+|+|-+-. . -. |.+.+++.++.|+ ++.+.|.
T Consensus 106 Gvd~v~I~~-~-~s--~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 106 GARVVRVAT-H-CT--EADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp TCCEEEEEE-E-TT--CGGGGHHHHHHHHHHTCEEEEE
T ss_pred CcCEEEEEE-e-cc--HHHHHHHHHHHHHHCCCEEEEE
Confidence 999987742 2 11 2245677777776 6776666
No 159
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=92.25 E-value=0.38 Score=41.20 Aligned_cols=87 Identities=16% Similarity=0.173 Sum_probs=58.9
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+.+.+..+.+.|+|.|.+-.+ +|-.+ ....++.+++.. ++|+. . | .+-+. ++++.+.++|
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a---~g~~~~~~~~i~~l~~~~p~~pvi----~---G-~v~t~-------~~a~~~~~~G 295 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTA---HGHSAGVLRKIAEIRAHFPNRTLI----A---G-NIATA-------EGARALYDAG 295 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCS---CTTCHHHHHHHHHHHHHCSSSCEE----E---E-EECSH-------HHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCeEEEeee---cCcchhHHHHHHHHHHHCCCCcEe----C---C-CccCH-------HHHHHHHHcC
Confidence 368899999999999998763 34332 355677777777 78874 3 2 33443 6777888999
Q ss_pred CCEEEEee----------ecCCCCcCHHHHHHHHHHh
Q psy7930 96 ADGFVIGA----------LTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 96 adG~VfG~----------L~~dg~iD~~~~~~Li~~a 122 (146)
+|++.+|. ++.-+.-..+.++++..++
T Consensus 296 ad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~ 332 (491)
T 1zfj_A 296 VDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVA 332 (491)
T ss_dssp CSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHH
T ss_pred CCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHH
Confidence 99999983 1122344566666666654
No 160
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=92.16 E-value=0.27 Score=39.43 Aligned_cols=73 Identities=18% Similarity=0.071 Sum_probs=53.8
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-----CCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
|++.|.+++..|.+.|++-|=++.. ..-.+.|.....+.+.+.+ ++|+.. = || ..|. +|+
T Consensus 159 vev~~~~E~~~a~~~gad~IGvn~~-~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA---e--gG--I~s~-------~dv 223 (254)
T 1vc4_A 159 VEVHTERELEIALEAGAEVLGINNR-DLATLHINLETAPRLGRLARKRGFGGVLVA---E--SG--YSRK-------EEL 223 (254)
T ss_dssp EEECSHHHHHHHHHHTCSEEEEESB-CTTTCCBCTTHHHHHHHHHHHTTCCSEEEE---E--SC--CCSH-------HHH
T ss_pred EEECCHHHHHHHHHcCCCEEEEccc-cCcCCCCCHHHHHHHHHhCccccCCCeEEE---E--cC--CCCH-------HHH
Confidence 7889999999999999998877652 2345677778777777655 555543 2 45 2233 567
Q ss_pred HHHHHcCCCEEEEe
Q psy7930 89 HQFVESGADGFVIG 102 (146)
Q Consensus 89 ~~~~~~GadG~VfG 102 (146)
..+++ |++||++|
T Consensus 224 ~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 224 KALEG-LFDAVLIG 236 (254)
T ss_dssp HTTTT-TCSEEEEC
T ss_pred HHHHc-CCCEEEEe
Confidence 78889 99999998
No 161
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=92.13 E-value=0.36 Score=38.88 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=50.2
Q ss_pred cCHHHHHHHHHcCC----CEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGA----DRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 17 ~s~~~a~~A~~~GA----dRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
++++.+....+.|. .-+=|-+ -|.++...+++++++.+ ++|+.| ||+-. |. ++++.+
T Consensus 139 ~~~~~~~~~a~~g~~~~~~~VYl~s----~G~~~~~~~i~~i~~~~~~~Pv~v------GgGI~-t~-------e~a~~~ 200 (240)
T 1viz_A 139 LNMDDIVAYARVSELLQLPIFYLEY----SGVLGDIEAVKKTKAVLETSTLFY------GGGIK-DA-------ETAKQY 200 (240)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC----TTSCCCHHHHHHHHHTCSSSEEEE------ESSCC-SH-------HHHHHH
T ss_pred CCHHHHHHHHHhCcccCCCEEEEeC----CCccChHHHHHHHHHhcCCCCEEE------EeccC-CH-------HHHHHH
Confidence 56788888888884 5664444 37899999999999999 999765 33222 22 456667
Q ss_pred HHcCCCEEEEee
Q psy7930 92 VESGADGFVIGA 103 (146)
Q Consensus 92 ~~~GadG~VfG~ 103 (146)
.+ ||||+|+|=
T Consensus 201 ~~-gAd~VIVGS 211 (240)
T 1viz_A 201 AE-HADVIVVGN 211 (240)
T ss_dssp HT-TCSEEEECT
T ss_pred Hh-CCCEEEECh
Confidence 77 999999994
No 162
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=92.09 E-value=0.66 Score=37.32 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=70.1
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCC------CCCC--CHHHHHHHHh---hCCCcEEEEEccCCCC---CcccCHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEG------GLTP--TLGLYRVIKR---LVLVPVFVMIRVRAGF---DFVFSQA 79 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~G------GlTP--S~g~i~~~~~---~~~ipv~vMIRP~R~g---dF~Ys~~ 79 (146)
+-+.|.+++..|.++|+++|-+....+.. +.|+ +...++.+.+ ..+++|..-|.- -.| ...++.+
T Consensus 77 ~l~~n~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~-~~~~e~~~~~~~~ 155 (295)
T 1ydn_A 77 VLVPNMKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSC-VVECPYDGPVTPQ 155 (295)
T ss_dssp EECSSHHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEEC-SSEETTTEECCHH
T ss_pred EEeCCHHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEE-EecCCcCCCCCHH
Confidence 33478999999999999999886422100 2222 2222222222 247777655543 221 2455666
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC---C-CCeEEee
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG---D-RPITFHR 131 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~---~-~~vtFHR 131 (146)
++..+. +.+.++|+|.+.+. +.-|........++++..+ + .++.||=
T Consensus 156 ~~~~~~---~~~~~~G~d~i~l~--Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~ 206 (295)
T 1ydn_A 156 AVASVT---EQLFSLGCHEVSLG--DTIGRGTPDTVAAMLDAVLAIAPAHSLAGHY 206 (295)
T ss_dssp HHHHHH---HHHHHHTCSEEEEE--ETTSCCCHHHHHHHHHHHHTTSCGGGEEEEE
T ss_pred HHHHHH---HHHHhcCCCEEEec--CCCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 665554 55668899999988 6677777777777777654 3 6788884
No 163
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.07 E-value=0.77 Score=38.67 Aligned_cols=67 Identities=27% Similarity=0.398 Sum_probs=47.1
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
+.+.+..+.++|||.|+|... .|.+. -...++.+++..++||.+ - .+-|.+ +++.+.++|+
T Consensus 106 ~~e~a~~l~eaGad~I~ld~a---~G~~~~~~~~i~~i~~~~~~~Viv--g------~v~t~e-------~A~~l~~aGa 167 (361)
T 3khj_A 106 EIERAKLLVEAGVDVIVLDSA---HGHSLNIIRTLKEIKSKMNIDVIV--G------NVVTEE-------ATKELIENGA 167 (361)
T ss_dssp CHHHHHHHHHTTCSEEEECCS---CCSBHHHHHHHHHHHHHCCCEEEE--E------EECSHH-------HHHHHHHTTC
T ss_pred HHHHHHHHHHcCcCeEEEeCC---CCCcHHHHHHHHHHHHhcCCcEEE--c------cCCCHH-------HHHHHHHcCc
Confidence 378899999999999999754 23221 235677777777888765 1 123333 4677888999
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|+|++|
T Consensus 168 D~I~VG 173 (361)
T 3khj_A 168 DGIKVG 173 (361)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999997
No 164
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.02 E-value=0.5 Score=37.30 Aligned_cols=85 Identities=11% Similarity=0.094 Sum_probs=58.8
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+.|++++..|.+.|||-|-+=-.-..|| ...++.+++.+ ++|+. | -||= |. +++..+.++
T Consensus 117 v~t~~e~~~A~~~Gad~vk~Fpa~~~gG----~~~lk~l~~~~~~ipvv----a-iGGI---~~-------~N~~~~l~a 177 (224)
T 1vhc_A 117 VNNPMAIEIALEMGISAVKFFPAEASGG----VKMIKALLGPYAQLQIM----P-TGGI---GL-------HNIRDYLAI 177 (224)
T ss_dssp ECSHHHHHHHHHTTCCEEEETTTTTTTH----HHHHHHHHTTTTTCEEE----E-BSSC---CT-------TTHHHHHTS
T ss_pred cCCHHHHHHHHHCCCCEEEEeeCccccC----HHHHHHHHhhCCCCeEE----E-ECCc---CH-------HHHHHHHhc
Confidence 7889999999999999999932111223 67888888877 68863 4 5662 11 356778888
Q ss_pred -CCCEEEEeeecCCCC---cCHHHHHHHH
Q psy7930 95 -GADGFVIGALTGEQE---IDIEFIRQLK 119 (146)
Q Consensus 95 -GadG~VfG~L~~dg~---iD~~~~~~Li 119 (146)
|++|+..+.|.+... =|.+.++++.
T Consensus 178 gga~~v~gS~i~~~~~i~~~~~~~i~~~a 206 (224)
T 1vhc_A 178 PNIVACGGSWFVEKKLIQSNNWDEIGRLV 206 (224)
T ss_dssp TTBCCEEECGGGCHHHHHTTCHHHHHHHH
T ss_pred CCCEEEEEchhcCcchhccCCHHHHHHHH
Confidence 999999888886432 2444444443
No 165
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.00 E-value=0.3 Score=38.90 Aligned_cols=71 Identities=28% Similarity=0.403 Sum_probs=47.8
Q ss_pred CHHH-HHHHHHcCCCEEEecCC-------C---------CCCCCCCC------HHHHHHHHhhCCCcEEEEEccCCCCCc
Q psy7930 18 SVAS-ALAAVRGGADRLELCAA-------L---------SEGGLTPT------LGLYRVIKRLVLVPVFVMIRVRAGFDF 74 (146)
Q Consensus 18 s~~~-a~~A~~~GAdRIELc~~-------l---------~~GGlTPS------~g~i~~~~~~~~ipv~vMIRP~R~gdF 74 (146)
++.+ +..+++.|+|-|-+-.. . ..||++.. ..+++++++.+++||.+ -||
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia-----~GG-- 249 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIG-----MGG-- 249 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEE-----CSS--
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEE-----ECC--
Confidence 4444 88899999999998431 1 02444432 47888888888999754 244
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
..|.+ |+..+.++|||+|.+|
T Consensus 250 I~~~~-------d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 250 VANAQ-------DVLEMYMAGASAVAVG 270 (311)
T ss_dssp CCSHH-------HHHHHHHHTCSEEEEC
T ss_pred cCCHH-------HHHHHHHcCCCEEEEC
Confidence 22333 5556667899999998
No 166
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.94 E-value=1.1 Score=36.71 Aligned_cols=112 Identities=10% Similarity=0.033 Sum_probs=69.5
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCC------CCCCCC------HHHHHHHHhhCCCcEEEEEccCCCC---Cccc
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSE------GGLTPT------LGLYRVIKRLVLVPVFVMIRVRAGF---DFVF 76 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~------GGlTPS------~g~i~~~~~~~~ipv~vMIRP~R~g---dF~Y 76 (146)
+-+.+.+..++..|.++|+++|-+....+. =+.|+. ...++.+++ .++.|.+-|-- -.| +..+
T Consensus 77 ~~~l~~~~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~-~G~~v~~~i~~-~~~~~~~~~~ 154 (307)
T 1ydo_A 77 YAALVPNQRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQK-ANLTTRAYLST-VFGCPYEKDV 154 (307)
T ss_dssp EEEECCSHHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHH-TTCEEEEEEEC-TTCBTTTBCC
T ss_pred EEEEeCCHHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCEEEEEEEE-EecCCcCCCC
Confidence 334457899999999999999998753221 122221 122333333 35555433321 111 1245
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC----CCCeEEe
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG----DRPITFH 130 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~----~~~vtFH 130 (146)
+.+.+.. =++.+.++|+|.|.+. +--|......+.+|++..+ +.++.||
T Consensus 155 ~~~~~~~---~~~~~~~~Ga~~i~l~--DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H 207 (307)
T 1ydo_A 155 PIEQVIR---LSEALFEFGISELSLG--DTIGAANPAQVETVLEALLARFPANQIALH 207 (307)
T ss_dssp CHHHHHH---HHHHHHHHTCSCEEEE--CSSCCCCHHHHHHHHHHHHTTSCGGGEEEE
T ss_pred CHHHHHH---HHHHHHhcCCCEEEEc--CCCCCcCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 5555544 4566778899988887 6778888889888888764 3678888
No 167
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=91.83 E-value=0.27 Score=41.18 Aligned_cols=74 Identities=22% Similarity=0.219 Sum_probs=51.1
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCC-----C-CCCCHHHHHHHHhh-------CC---CcEEEEEccCCCCCcccCH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEG-----G-LTPTLGLYRVIKRL-------VL---VPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~G-----G-lTPS~g~i~~~~~~-------~~---ipv~vMIRP~R~gdF~Ys~ 78 (146)
.+.|.+++..+.+.|||-|-+ ++-..+ | -.|....+.++++. ++ +||.+ -|| ....
T Consensus 218 gi~t~e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia-----~GG-I~~~- 289 (393)
T 2qr6_A 218 GVNDYTTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIA-----DGS-IENS- 289 (393)
T ss_dssp CCCSHHHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEE-----CSS-CCSH-
T ss_pred CcCCHHHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEE-----ECC-CCCH-
Confidence 467899999999999999999 431111 2 15667777766665 44 77643 244 3322
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
.|+..+..+|||+|.+|=
T Consensus 290 -------~dv~kalalGA~~V~iG~ 307 (393)
T 2qr6_A 290 -------GDVVKAIACGADAVVLGS 307 (393)
T ss_dssp -------HHHHHHHHHTCSEEEECG
T ss_pred -------HHHHHHHHcCCCEEEECH
Confidence 567788889999999993
No 168
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=91.75 E-value=2.2 Score=32.68 Aligned_cols=108 Identities=10% Similarity=-0.018 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCC-CCCHHHHH---HHHhhCCCcEEEEEccCCCCCcccC---HHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGL-TPTLGLYR---VIKRLVLVPVFVMIRVRAGFDFVFS---QAEKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGl-TPS~g~i~---~~~~~~~ipv~vMIRP~R~gdF~Ys---~~E~~~M~~dI~~~~ 92 (146)
+.+..|.+.|.+-|||..... ..+ ..+...++ ...+..++++..+ -| ..+ +..+ +.-++.+++-|+.++
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~i~~A~ 94 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHA-QNLYMQEYETTERELNCLKDKTLEITMI-SD-YLD-ISLSADFEKTIEKCEQLAILAN 94 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHH-HHHHHHCHHHHHHHHHHTGGGTCCEEEE-EC-CCC-CSTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccccc-ccccccCHHHHHHHHHHHHHcCCeEEEE-ec-CCC-CCCchhHHHHHHHHHHHHHHHH
Confidence 345678889999999953100 000 01223344 4444558887764 45 221 2121 345788999999999
Q ss_pred HcCCCEEEEeeec-CCCCcC-------HHHHHHHHHHhC--CCCeEEee
Q psy7930 93 ESGADGFVIGALT-GEQEID-------IEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 93 ~~GadG~VfG~L~-~dg~iD-------~~~~~~Li~~a~--~~~vtFHR 131 (146)
++|++-+++..=. +.+... .+.++++.+.|+ |+.+.+|-
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 143 (286)
T 3dx5_A 95 WFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLET 143 (286)
T ss_dssp HHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEec
Confidence 9999999874322 111122 355666766664 77777774
No 169
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=91.71 E-value=2.6 Score=34.23 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=76.3
Q ss_pred eEEEecCHHHHHH----HHHcCCCEEEecCCCCCCCCCCC---HHHHHHHHhhC-CCcEEEEEccC-CCCCcccCHHHHH
Q psy7930 12 LEVCVDSVASALA----AVRGGADRLELCAALSEGGLTPT---LGLYRVIKRLV-LVPVFVMIRVR-AGFDFVFSQAEKE 82 (146)
Q Consensus 12 lEvcv~s~~~a~~----A~~~GAdRIELc~~l~~GGlTPS---~g~i~~~~~~~-~ipv~vMIRP~-R~gdF~Ys~~E~~ 82 (146)
+=+...+.+++.. +...|||=|||.-++-.. ..+. ...++.+++.. ++|+.+-+|++ -||-|..++++..
T Consensus 44 v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~ 122 (276)
T 3o1n_A 44 VSLMGKTITDVKSEALAYREADFDILEWRVDHFAN-VTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYI 122 (276)
T ss_dssp EEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-TTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc-cCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHH
Confidence 3444456666554 445899999999876553 3331 23455566666 79999999973 3577777776554
Q ss_pred HHHHHHHHHHHcC-CCEEEEeeecCCCCcCHHHHHHHHHHh--CCCCeEEee-cccCCCC
Q psy7930 83 IMALDCHQFVESG-ADGFVIGALTGEQEIDIEFIRQLKTII--GDRPITFHR-AFDVVRE 138 (146)
Q Consensus 83 ~M~~dI~~~~~~G-adG~VfG~L~~dg~iD~~~~~~Li~~a--~~~~vtFHR-AFD~~~d 138 (146)
.+ ++.+.++| +|-+-+= -..+.+..++|++.| ++.++..+. =|+.+++
T Consensus 123 ~l---l~~~l~~g~~dyIDvE-----l~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~ 174 (276)
T 3o1n_A 123 DL---NRAAVDSGLVDMIDLE-----LFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPA 174 (276)
T ss_dssp HH---HHHHHHHTCCSEEEEE-----GGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC
T ss_pred HH---HHHHHhcCCCCEEEEE-----CcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcC
Confidence 44 34455678 7776553 345677899999865 466666533 4777764
No 170
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=91.65 E-value=0.082 Score=42.54 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=49.4
Q ss_pred CHHHHHHHHHcCC-----CEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGA-----DRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 18 s~~~a~~A~~~GA-----dRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
+.+.+..-.+.|+ .-|=|-+ -|.++...+++.+++.+ ++|+.| ||+-. |. ++++.+
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~----~G~~~~~~~i~~i~~~~~~~Pv~v------GgGI~-s~-------e~a~~~ 208 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY----SGTYGNPELVAEVKKVLDKARLFY------GGGID-SR-------EKAREM 208 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC----TTSCCCHHHHHHHHHHCSSSEEEE------ESCCC-SH-------HHHHHH
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC----CCCcchHHHHHHHHHhCCCCCEEE------EecCC-CH-------HHHHHH
Confidence 6666888888888 5555554 36899999999999999 999865 33222 22 456667
Q ss_pred HHcCCCEEEEee
Q psy7930 92 VESGADGFVIGA 103 (146)
Q Consensus 92 ~~~GadG~VfG~ 103 (146)
.+ ||||+|+|=
T Consensus 209 ~~-gAd~VIVGS 219 (234)
T 2f6u_A 209 LR-YADTIIVGN 219 (234)
T ss_dssp HH-HSSEEEECH
T ss_pred Hh-CCCEEEECh
Confidence 77 999999993
No 171
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=91.64 E-value=0.15 Score=38.21 Aligned_cols=65 Identities=17% Similarity=0.270 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.+.+..+.++|++-|+|-.. ..+|. ...++.+++.. ...+.+|+. ++++.++++|
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~----~~~~~~~~~~~~~l~~~~~~~~v~v~v~------------------~~~~~a~~~g 86 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIK----NAPTREMYEIGKTLRQLTREYDALFFVD------------------DRVDVALAVD 86 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCC----SCCHHHHHHHHHHHHHHHHHTTCEEEEE------------------SCHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEc------------------ChHHHHHHcC
Confidence 47788899999999999841 12222 33344443322 123444553 2346788999
Q ss_pred CCEEEEeeec
Q psy7930 96 ADGFVIGALT 105 (146)
Q Consensus 96 adG~VfG~L~ 105 (146)
+||+++|..+
T Consensus 87 ad~v~l~~~~ 96 (215)
T 1xi3_A 87 ADGVQLGPED 96 (215)
T ss_dssp CSEEEECTTS
T ss_pred CCEEEECCcc
Confidence 9999998543
No 172
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=91.58 E-value=2 Score=36.64 Aligned_cols=84 Identities=11% Similarity=-0.083 Sum_probs=55.7
Q ss_pred cCHHHHHHHHHc-CCCEEEecCCCCCCCCCCCHHHHHHHHh---hCCCcEEEEEc-cCCCCCccc----CHHHHHHHHHH
Q psy7930 17 DSVASALAAVRG-GADRLELCAALSEGGLTPTLGLYRVIKR---LVLVPVFVMIR-VRAGFDFVF----SQAEKEIMALD 87 (146)
Q Consensus 17 ~s~~~a~~A~~~-GAdRIELc~~l~~GGlTPS~g~i~~~~~---~~~ipv~vMIR-P~R~gdF~Y----s~~E~~~M~~d 87 (146)
.+......+.+. |.+-||+.-.-...|...+...++++++ ..++.+.++=- | -..++.. -+..++.+++-
T Consensus 31 ~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~-~~~~i~~~~~~r~~~ie~~k~~ 109 (386)
T 3bdk_A 31 KDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIP-VHEDIKQGKPNRDALIENYKTS 109 (386)
T ss_dssp TCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCC-CCHHHHTTCTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccc-cccccccCcHHHHHHHHHHHHH
Confidence 344567778899 9999999633233455556555555554 45788877621 2 1111111 26788999999
Q ss_pred HHHHHHcCCCEEEE
Q psy7930 88 CHQFVESGADGFVI 101 (146)
Q Consensus 88 I~~~~~~GadG~Vf 101 (146)
|+.+.++|++-|++
T Consensus 110 i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 110 IRNVGAAGIPVVCY 123 (386)
T ss_dssp HHHHHTTTCCEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 99999999997764
No 173
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.54 E-value=0.39 Score=39.99 Aligned_cols=79 Identities=15% Similarity=0.191 Sum_probs=56.0
Q ss_pred ccceeEEEecCHHH----HHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHH
Q psy7930 8 NKTTLEVCVDSVAS----ALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 8 ~~~~lEvcv~s~~~----a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
-++++|.|.-+.++ +..|.++|||-|--......||.|| ...+|+++.+..+-++ =|-+ -|| .-|.++..
T Consensus 176 lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~~~g~~v--~VKA-AGG--Irt~edAl 250 (288)
T 3oa3_A 176 LKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSET--RVKA-SGG--IRTIEDCV 250 (288)
T ss_dssp EEEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHHHSSSCC--EEEE-ESS--CCSHHHHH
T ss_pred ceEEEECCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHhCCCc--eEEE-eCC--CCCHHHHH
Confidence 46788999888888 7888899999999998888888887 6788888876443332 2334 455 22444444
Q ss_pred HHHHHHHHHHHcCCCE
Q psy7930 83 IMALDCHQFVESGADG 98 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG 98 (146)
. +.++||+-
T Consensus 251 ~-------mi~aGA~R 259 (288)
T 3oa3_A 251 K-------MVRAGAER 259 (288)
T ss_dssp H-------HHHTTCSE
T ss_pred H-------HHHcCCce
Confidence 4 44589983
No 174
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.54 E-value=0.76 Score=37.43 Aligned_cols=66 Identities=23% Similarity=0.228 Sum_probs=42.9
Q ss_pred cCCCEEEecCCCCC-CCC----CC--CHHHHHHHHhhC---------CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 28 GGADRLELCAALSE-GGL----TP--TLGLYRVIKRLV---------LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 28 ~GAdRIELc~~l~~-GGl----TP--S~g~i~~~~~~~---------~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
.|+|-||++-+-.. -|. .| ...+++.+++.. ++||.|=|+| - ++.+|+ .+-.+.+
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~-~-----~~~~~~---~~~a~~l 234 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAP-D-----LSEEEL---IQVADSL 234 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCS-C-----CCHHHH---HHHHHHH
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecC-C-----CCHHHH---HHHHHHH
Confidence 48999999742100 010 01 136778888776 7999887777 2 455543 3446778
Q ss_pred HHcCCCEEEEe
Q psy7930 92 VESGADGFVIG 102 (146)
Q Consensus 92 ~~~GadG~VfG 102 (146)
.+.|+|+|++.
T Consensus 235 ~~~Gvd~i~vs 245 (336)
T 1f76_A 235 VRHNIDGVIAT 245 (336)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCcEEEEe
Confidence 89999999974
No 175
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=91.35 E-value=1.6 Score=34.34 Aligned_cols=81 Identities=11% Similarity=0.037 Sum_probs=51.4
Q ss_pred CHHH-HHHHHHcCCCEEEecCCCCCCCCCC-----C---HHHHHHHHhhCCCcEEEEEc---------cCCCCC-----c
Q psy7930 18 SVAS-ALAAVRGGADRLELCAALSEGGLTP-----T---LGLYRVIKRLVLVPVFVMIR---------VRAGFD-----F 74 (146)
Q Consensus 18 s~~~-a~~A~~~GAdRIELc~~l~~GGlTP-----S---~g~i~~~~~~~~ipv~vMIR---------P~R~gd-----F 74 (146)
++++ +..|.+.|.+-|||... .+.+.+ + ..-++...+..++.+..+-- | .-+ |
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p--~~~~~~~~~ 91 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACW--GDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDA--IIDERHEAI 91 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESS--TTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCS--CCSHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeccc--cccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccc--ccccccccc
Confidence 3444 67788899999999863 112222 1 34555666667888765321 3 111 1
Q ss_pred c----c---CH-----HHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 75 V----F---SQ-----AEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 75 ~----Y---s~-----~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
. . ++ .-++.+++-|+.++++|++-+|+-
T Consensus 92 ~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~ 131 (340)
T 2zds_A 92 LPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGF 131 (340)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred ccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 1 0 22 236789999999999999999973
No 176
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=91.34 E-value=1.2 Score=36.95 Aligned_cols=112 Identities=12% Similarity=-0.013 Sum_probs=65.4
Q ss_pred HHHHHHHHcCCCEEEecC-CCCCCCCCC-----CHHHHHHHHhhCCCcEEEEEccC----C--CCCcccCHHH-----HH
Q psy7930 20 ASALAAVRGGADRLELCA-ALSEGGLTP-----TLGLYRVIKRLVLVPVFVMIRVR----A--GFDFVFSQAE-----KE 82 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~-~l~~GGlTP-----S~g~i~~~~~~~~ipv~vMIRP~----R--~gdF~Ys~~E-----~~ 82 (146)
+.+..+.+.|.+-|||.. .+...+.++ ....++...+..++.+..+--+- + .|+|.-.+.+ ++
T Consensus 37 e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~spd~~~r~~~i~ 116 (393)
T 1xim_A 37 EAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGFTSNDRSVRRYAIR 116 (393)
T ss_dssp HHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCCCCCCHHHHHHHHH
Confidence 445667889999999972 122223332 23344444455577764432210 1 2455543333 57
Q ss_pred HHHHHHHHHHHcCCCEEEEeee----cCCCCcC--------HHHHHHHHHHhC----CCCeEEee
Q psy7930 83 IMALDCHQFVESGADGFVIGAL----TGEQEID--------IEFIRQLKTIIG----DRPITFHR 131 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L----~~dg~iD--------~~~~~~Li~~a~----~~~vtFHR 131 (146)
.+++-|+.++++|++-+|+-.= +..+..| .+.++++.+.|. ++.+.+|=
T Consensus 117 ~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~ 181 (393)
T 1xim_A 117 KVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEP 181 (393)
T ss_dssp HHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 8999999999999999998321 1112334 245666666665 66777664
No 177
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=91.29 E-value=0.52 Score=38.43 Aligned_cols=83 Identities=19% Similarity=0.151 Sum_probs=51.9
Q ss_pred ceeEEEecCHH----HHHHHHHcCCCEEEecCCCCC--------CC-C--CC--CHHHHHHHHhhCCCcEEEEEccCCCC
Q psy7930 10 TTLEVCVDSVA----SALAAVRGGADRLELCAALSE--------GG-L--TP--TLGLYRVIKRLVLVPVFVMIRVRAGF 72 (146)
Q Consensus 10 ~~lEvcv~s~~----~a~~A~~~GAdRIELc~~l~~--------GG-l--TP--S~g~i~~~~~~~~ipv~vMIRP~R~g 72 (146)
+.+.++..+++ .|..|++. +|-|||+.+-.. || + .| ...+++.+++.+++||.|=||| |
T Consensus 61 ~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~---G 136 (318)
T 1vhn_A 61 VAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL---G 136 (318)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES---C
T ss_pred EEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC---C
Confidence 45666655554 45566677 999999853111 11 1 11 1234677777778898777777 2
Q ss_pred CcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 73 DFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 73 dF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
+. ..|. .+.++.+.+.|+|+|++-
T Consensus 137 -~~--~~~~---~~~a~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 137 -WE--KNEV---EEIYRILVEEGVDEVFIH 160 (318)
T ss_dssp -SS--SCCH---HHHHHHHHHTTCCEEEEE
T ss_pred -CC--hHHH---HHHHHHHHHhCCCEEEEc
Confidence 22 2221 167888899999999884
No 178
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=91.27 E-value=1.1 Score=37.08 Aligned_cols=114 Identities=12% Similarity=-0.008 Sum_probs=66.4
Q ss_pred CH-HHHHHHHHcCCCEEEecC-CCCCCCCCC-----CHHHHHHHHhhCCCcEEEEEc-----cC-CCCCcccCHHH----
Q psy7930 18 SV-ASALAAVRGGADRLELCA-ALSEGGLTP-----TLGLYRVIKRLVLVPVFVMIR-----VR-AGFDFVFSQAE---- 80 (146)
Q Consensus 18 s~-~~a~~A~~~GAdRIELc~-~l~~GGlTP-----S~g~i~~~~~~~~ipv~vMIR-----P~-R~gdF~Ys~~E---- 80 (146)
++ +.+..|.+.|.+-|||.. .+...+.++ ....++...+..++.|..+-- |+ ..|+|.-.+.+
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~ 113 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAFTSPDPWVRAY 113 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCSTTCSSHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCCCCCCHHHHHH
Confidence 44 445678889999999972 122233332 233444444555777643321 10 02355544333
Q ss_pred -HHHHHHHHHHHHHcCCCEEEEeeecC----CCCcC--------HHHHHHHHHHhC----CCCeEEee
Q psy7930 81 -KEIMALDCHQFVESGADGFVIGALTG----EQEID--------IEFIRQLKTIIG----DRPITFHR 131 (146)
Q Consensus 81 -~~~M~~dI~~~~~~GadG~VfG~L~~----dg~iD--------~~~~~~Li~~a~----~~~vtFHR 131 (146)
++.+++-|+.++++|++-+|+..=.+ ....| .+.++++.+.|. ++.+.+|=
T Consensus 114 ~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~ 181 (387)
T 1bxb_A 114 ALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEP 181 (387)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 57899999999999999998853110 11122 255667777665 66666653
No 179
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=91.22 E-value=1.1 Score=38.56 Aligned_cols=71 Identities=23% Similarity=0.335 Sum_probs=50.8
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCC-----------CCCCHHHHHHHHhh---CCCcEEEEEccCCCCCcccCHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGG-----------LTPTLGLYRVIKRL---VLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GG-----------lTPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
.+.+.+++..+++.|||-|-+ ++ .|| -.|....+..+.+. .++||.+ -|| ....
T Consensus 285 ~~~t~e~a~~l~~~G~d~I~v-~~--~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia-----~GG-I~~~--- 352 (494)
T 1vrd_A 285 NVATPEGTEALIKAGADAVKV-GV--GPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIA-----DGG-IRYS--- 352 (494)
T ss_dssp EECSHHHHHHHHHTTCSEEEE-CS--SCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEE-----ESC-CCSH---
T ss_pred CcCCHHHHHHHHHcCCCEEEE-cC--CCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEE-----ECC-cCCH---
Confidence 578999999999999999998 32 122 14666666666554 5788754 233 3322
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe
Q psy7930 81 KEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+|||+|.+|
T Consensus 353 -----~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 353 -----GDIVKALAAGAESVMVG 369 (494)
T ss_dssp -----HHHHHHHHTTCSEEEES
T ss_pred -----HHHHHHHHcCCCEEEEC
Confidence 57778888999999988
No 180
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=91.14 E-value=0.61 Score=38.42 Aligned_cols=68 Identities=21% Similarity=0.198 Sum_probs=47.4
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh----CCCc-EEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL----VLVP-VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~----~~ip-v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.+..+.+.|||-+-+---.. | |++...++.+.+. +.+| |.+ -||. +.+++..+.+++ ++.|
T Consensus 182 aa~~a~~lGaD~iKv~~~~~--~-~g~~~~~~~vv~~~~~~~~~P~Vv~-----aGG~---~~~~~~~~~~~a---~~aG 247 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLY--G-KGARSDLLTASQRLNGHINMPWVIL-----SSGV---DEKLFPRAVRVA---MEAG 247 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGG--G-CSCHHHHHHHHHHHHHTCCSCEEEC-----CTTS---CTTTHHHHHHHH---HHTT
T ss_pred HHHHHHHcCCCEEEeCCCcC--C-CCCHHHHHHHHHhccccCCCCeEEE-----ecCC---CHHHHHHHHHHH---HHcC
Confidence 37888888999876654221 2 3377777777776 7888 543 4776 666666655554 6789
Q ss_pred CCEEEEe
Q psy7930 96 ADGFVIG 102 (146)
Q Consensus 96 adG~VfG 102 (146)
++||++|
T Consensus 248 a~Gv~vG 254 (304)
T 1to3_A 248 ASGFLAG 254 (304)
T ss_dssp CCEEEES
T ss_pred CeEEEEe
Confidence 9999999
No 181
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=91.04 E-value=0.69 Score=39.15 Aligned_cols=69 Identities=22% Similarity=0.146 Sum_probs=49.5
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCC----------------------------CCCHHHHHHHHhhC-CCcEEEEEc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGL----------------------------TPTLGLYRVIKRLV-LVPVFVMIR 67 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGl----------------------------TPS~g~i~~~~~~~-~ipv~vMIR 67 (146)
.|.++|..+++.|||-|-+-.. ||+ .|+...+.++++.+ ++||.+-
T Consensus 199 ~s~~~A~~l~~aGad~I~V~g~---GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ipvia~-- 273 (368)
T 3vkj_A 199 ISMETAKLLYSYGIKNFDTSGQ---GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPDSFLVGS-- 273 (368)
T ss_dssp CCHHHHHHHHHTTCCEEECCCB---TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTTCEEEEE--
T ss_pred CCHHHHHHHHhCCCCEEEEeCC---CCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCCCcEEEE--
Confidence 5899999999999999998654 663 24444566666666 4776542
Q ss_pred cCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 68 VRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 68 P~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
|| .. |. .|+..+..+|||+|-+|
T Consensus 274 ---GG-I~-~~-------~d~~kal~lGA~~v~ig 296 (368)
T 3vkj_A 274 ---GG-IR-SG-------LDAAKAIALGADIAGMA 296 (368)
T ss_dssp ---SS-CC-SH-------HHHHHHHHHTCSEEEEC
T ss_pred ---CC-CC-CH-------HHHHHHHHcCCCEEEEc
Confidence 33 32 22 57777888999999999
No 182
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=91.03 E-value=0.6 Score=37.78 Aligned_cols=96 Identities=8% Similarity=0.067 Sum_probs=62.8
Q ss_pred eeEEEecCHHHHHHHHHc-CCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRG-GADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~-GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
..=|||.|.+++..|.+. |++=|=.+. -...++++.......+.+.+.-.+ +.|-= +| .+|. +|++
T Consensus 152 ~~lvEv~~~eE~~~A~~l~g~~iIGinn-r~l~t~~~d~~~~~~l~~~ip~~~-~vIaE--sG--I~t~-------edv~ 218 (251)
T 1i4n_A 152 DSLVEVHSREDLEKVFSVIRPKIIGINT-RDLDTFEIKKNVLWELLPLVPDDT-VVVAE--SG--IKDP-------RELK 218 (251)
T ss_dssp EEEEEECSHHHHHHHHTTCCCSEEEEEC-BCTTTCCBCTTHHHHHGGGSCTTS-EEEEE--SC--CCCG-------GGHH
T ss_pred eEEEEeCCHHHHHHHHhcCCCCEEEEeC-cccccCCCCHHHHHHHHHhCCCCC-EEEEe--CC--CCCH-------HHHH
Confidence 344678899999999999 999887765 345678888888887777652212 22222 44 2232 5688
Q ss_pred HHHHcCCCEEEEe-eecCCCCcCHHHHHHHHHH
Q psy7930 90 QFVESGADGFVIG-ALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 90 ~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~~ 121 (146)
.++++ ++||++| .|+.... -...+++|+.+
T Consensus 219 ~~~~~-a~avLVG~aimr~~d-~~~~~~~l~~~ 249 (251)
T 1i4n_A 219 DLRGK-VNAVLVGTSIMKAEN-PRRFLEEMRAW 249 (251)
T ss_dssp HHTTT-CSEEEECHHHHHCSS-HHHHHHHHHHH
T ss_pred HHHHh-CCEEEEcHHHcCCcC-HHHHHHHHHhC
Confidence 88999 9999999 2332221 23455666554
No 183
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.02 E-value=1 Score=39.49 Aligned_cols=102 Identities=16% Similarity=0.166 Sum_probs=63.2
Q ss_pred ceeEEEe----cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 10 TTLEVCV----DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 10 ~~lEvcv----~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
..+-+.+ ++.+.+....++|+|.|++.++ .|....-..+++++++.. ++||.+- -+.+.
T Consensus 245 l~V~aavg~~~d~~era~aLveaGvd~I~Id~a--~g~~~~v~~~i~~i~~~~~~~~vi~g--------~v~t~------ 308 (511)
T 3usb_A 245 LLVGAAVGVTADAMTRIDALVKASVDAIVLDTA--HGHSQGVIDKVKEVRAKYPSLNIIAG--------NVATA------ 308 (511)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEEECS--CTTSHHHHHHHHHHHHHCTTSEEEEE--------EECSH------
T ss_pred eeeeeeeeeccchHHHHHHHHhhccceEEeccc--ccchhhhhhHHHHHHHhCCCceEEee--------eeccH------
Confidence 4444444 3467788889999999999875 344433456777777766 4676531 12232
Q ss_pred HHHHHHHHHcCCCEEEEeee----------cCCCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 85 ALDCHQFVESGADGFVIGAL----------TGEQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~L----------~~dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
++.+.+.++|+|+|++|.= +.-|.-+...+.++.++++ +.|+.
T Consensus 309 -e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 309 -EATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp -HHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred -HHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEE
Confidence 3467788899999999641 1112345566666666665 35543
No 184
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=90.96 E-value=0.5 Score=39.97 Aligned_cols=70 Identities=24% Similarity=0.226 Sum_probs=50.3
Q ss_pred HHHHHHHHcCCCEEEecCCC-------------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCcccCH
Q psy7930 20 ASALAAVRGGADRLELCAAL-------------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-------------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~ 78 (146)
+-|..++++|||-|-+-... ..||+++ +...++++++.+ ++||... || ..|.
T Consensus 238 ~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~-----GG--I~s~ 310 (367)
T 3zwt_A 238 DIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV-----GG--VSSG 310 (367)
T ss_dssp HHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE-----SS--CCSH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEE-----CC--CCCH
Confidence 34677889999999987533 2478765 357899999988 7998653 55 3344
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+|+..+.++|||+|.+|=
T Consensus 311 -------~da~~~l~~GAd~V~vgr 328 (367)
T 3zwt_A 311 -------QDALEKIRAGASLVQLYT 328 (367)
T ss_dssp -------HHHHHHHHHTCSEEEESH
T ss_pred -------HHHHHHHHcCCCEEEECH
Confidence 455555667999999983
No 185
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=90.94 E-value=1.4 Score=36.47 Aligned_cols=112 Identities=14% Similarity=0.046 Sum_probs=66.1
Q ss_pred HHHHHHHHcCCCEEEecC-CCCCCCCCCC-----HHHHHHHHhhCCCcEEEEE-----ccC-CCCCcccCHHH-----HH
Q psy7930 20 ASALAAVRGGADRLELCA-ALSEGGLTPT-----LGLYRVIKRLVLVPVFVMI-----RVR-AGFDFVFSQAE-----KE 82 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~-~l~~GGlTPS-----~g~i~~~~~~~~ipv~vMI-----RP~-R~gdF~Ys~~E-----~~ 82 (146)
+.+..|.+.|.+-|||.. .+...+.+|. ..-+++..+..++.+..+- -|. +.|+|.-.+.+ ++
T Consensus 37 e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l~~~d~~~r~~~i~ 116 (386)
T 1muw_A 37 ETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGGFTANDRDVRRYALR 116 (386)
T ss_dssp HHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCCCCCCCHHHHHHHHH
Confidence 456677888999999975 2222333332 3344444445577765442 120 23456544333 57
Q ss_pred HHHHHHHHHHHcCCCEEEEeeecC----CCCcC--------HHHHHHHHHHhC--C--CCeEEee
Q psy7930 83 IMALDCHQFVESGADGFVIGALTG----EQEID--------IEFIRQLKTIIG--D--RPITFHR 131 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~~----dg~iD--------~~~~~~Li~~a~--~--~~vtFHR 131 (146)
.+++-|+.++++|++-+|+..=.. .+..| .+.++++.+.|. | +.+.+|=
T Consensus 117 ~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~ 181 (386)
T 1muw_A 117 KTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEP 181 (386)
T ss_dssp HHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 899999999999999999832111 12334 244566666664 5 6777663
No 186
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=90.93 E-value=1.2 Score=37.79 Aligned_cols=72 Identities=25% Similarity=0.261 Sum_probs=54.7
Q ss_pred EecCHHHHHHHHHcCCCEE-EecC----CCCCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRL-ELCA----ALSEGG--LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRI-ELc~----~l~~GG--lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
-+.+.+.|..|+++||.=| -||. --..|| .-.+...++++++.+++||..-+|- |. ..+
T Consensus 23 d~~~~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~p~~i~~I~~av~iPV~~K~ri--g~------------~~e 88 (330)
T 2yzr_A 23 DVTNVEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSDPALIEEIMDAVSIPVMAKCRI--GH------------TTE 88 (330)
T ss_dssp EESSHHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCCHHHHHHHHHHCSSCEEEEEET--TC------------HHH
T ss_pred eCCHHHHHHHHHHcCCCEEEecCCccccccCCcchhhcCCHHHHHHHHHhcCCCeEEEEee--cc------------hHH
Confidence 6788999999999999999 3331 124567 8889999999999999999888876 32 244
Q ss_pred HHHHHHcCCCEEE
Q psy7930 88 CHQFVESGADGFV 100 (146)
Q Consensus 88 I~~~~~~GadG~V 100 (146)
.+.+.++|||-|-
T Consensus 89 ~qilea~GaD~Id 101 (330)
T 2yzr_A 89 ALVLEAIGVDMID 101 (330)
T ss_dssp HHHHHHTTCSEEE
T ss_pred HHHHHHcCCCEEe
Confidence 5555669999884
No 187
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=90.93 E-value=0.57 Score=38.67 Aligned_cols=68 Identities=12% Similarity=0.126 Sum_probs=46.8
Q ss_pred HHHHHHHHHcC--CCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGG--ADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~G--AdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+.+..+.+.| ++-|++.. ..|...+....++.+++..+.|+.+ . | ++-+. +|++.+.++|+
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~--~~G~~~~~~~~i~~lr~~~~~~~vi---~---G-~v~s~-------e~A~~a~~aGa 171 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDI--AHGHSNAVINMIQHIKKHLPESFVI---A---G-NVGTP-------EAVRELENAGA 171 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEEC--SSCCSHHHHHHHHHHHHHCTTSEEE---E---E-EECSH-------HHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCEEEEEC--CCCCcHHHHHHHHHHHHhCCCCEEE---E---C-CcCCH-------HHHHHHHHcCC
Confidence 45567778889 99999964 3353344577899999888533322 1 1 33332 47888999999
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|+|++|
T Consensus 172 d~Ivvs 177 (336)
T 1ypf_A 172 DATKVG 177 (336)
T ss_dssp SEEEEC
T ss_pred CEEEEe
Confidence 999995
No 188
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=90.91 E-value=0.22 Score=44.06 Aligned_cols=67 Identities=9% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee----ecC--CCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 58 VLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA----LTG--EQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 58 ~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~----L~~--dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
-++|++||.= .+-+.+..-.+.+++|++.+|++|.++|-+++ +-+ .|+.|.+.++++++.++ |+.+.
T Consensus 9 ~~~~~~vmlp----~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~~~d~~id~a~~~GL~vi 83 (516)
T 1vem_A 9 PDYKAYLMAP----LKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSYAQRFAQSVKNAGMKMI 83 (516)
T ss_dssp TTCEEEEECC----SSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred CCCCeEEEec----ccccCCCCCHHHHHHHHHHHHHcCCCEEEEecchhhccCCCCCccchHHHHHHHHHHHHCCCEEE
Confidence 3689999963 23333344557999999999999999999987 334 48999999999999987 66644
No 189
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=90.80 E-value=0.22 Score=41.03 Aligned_cols=79 Identities=14% Similarity=0.114 Sum_probs=42.5
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCc----EEEEEccCCCCCcccCHHHHHHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVP----VFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ip----v~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
..+|+-+++++++..|.+.|||.|=| ++ .+...++++++.++-+ =++-|-. .|| .. .
T Consensus 200 ~~i~vev~tlee~~~A~~aGaD~I~l-d~-------~~~~~l~~~v~~l~~~~~g~~~v~I~A-SGG-It--~------- 260 (294)
T 3c2e_A 200 VKIEVECLSEDEATEAIEAGADVIML-DN-------FKGDGLKMCAQSLKNKWNGKKHFLLEC-SGG-LN--L------- 260 (294)
T ss_dssp SCEEEECSSSHHHHHHHHHTCSEEEC-CC----------------------------CCEEEE-ECC-CC--C-------
T ss_pred CeEEEecCCHHHHHHHHHcCCCEEEE-CC-------CCHHHHHHHHHHhcccccCCCCeEEEE-ECC-CC--H-------
Confidence 46788889999999999999999987 33 2345666655544211 0123344 444 42 2
Q ss_pred HHHHHHHHcCCCEEEEeeecCC
Q psy7930 86 LDCHQFVESGADGFVIGALTGE 107 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~d 107 (146)
+.|+.+.+.|+|+|.+|.++.+
T Consensus 261 ~ni~~~~~~GvD~i~vGs~i~~ 282 (294)
T 3c2e_A 261 DNLEEYLCDDIDIYSTSSIHQG 282 (294)
T ss_dssp ------CCCSCSEEECGGGTSS
T ss_pred HHHHHHHHcCCCEEEEechhcC
Confidence 4677888999999999997654
No 190
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=90.74 E-value=0.22 Score=41.92 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=57.2
Q ss_pred HHHHHHHcCCCEEEecCCCCCC--CCCCCHHHHHHHHh---hCCCcEEEE--EccCC-CCCcccCHHHHHHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEG--GLTPTLGLYRVIKR---LVLVPVFVM--IRVRA-GFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~G--GlTPS~g~i~~~~~---~~~ipv~vM--IRP~R-~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
++..|.+.|||=+-+--.+..| +..-....+.++.+ ..++|+.+| +-| | +| -+=++..-+....-++.+.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~-r~gg-~v~~~~dp~~Va~aaRiAa 210 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLEPFMSN-WVNG-KVVNDLSTDAVIQSVAIAA 210 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEEE-EETT-EEEECCSHHHHHHHHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeccc-cCCC-CcCCCCCHHHHHHHHHHHH
Confidence 4555678899998743222233 22122223333332 348999998 888 6 54 3333345567788899999
Q ss_pred HcCCC----EEEEeeecCCCCcCHHHHHHHHHHhCCCCeEE
Q psy7930 93 ESGAD----GFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129 (146)
Q Consensus 93 ~~Gad----G~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtF 129 (146)
++||| =+=.-. + +.++++++.| +.|+.+
T Consensus 211 ELGADs~~tivK~~y-~-------e~f~~Vv~a~-~vPVVi 242 (307)
T 3fok_A 211 GLGNDSSYTWMKLPV-V-------EEMERVMEST-TMPTLL 242 (307)
T ss_dssp TCSSCCSSEEEEEEC-C-------TTHHHHGGGC-SSCEEE
T ss_pred HhCCCcCCCEEEeCC-c-------HHHHHHHHhC-CCCEEE
Confidence 99999 443322 2 2356666655 455544
No 191
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=90.70 E-value=0.61 Score=36.95 Aligned_cols=75 Identities=28% Similarity=0.223 Sum_probs=53.0
Q ss_pred ccceeEEEecCHH----HHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHH
Q psy7930 8 NKTTLEVCVDSVA----SALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 8 ~~~~lEvcv~s~~----~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
.++++|.|.-+.+ -++.|.++|||-|--......||.|| +..+|+++. ..++||- + -|| -. |.++..
T Consensus 121 lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~v-g~~v~Vk----a-aGG-ir-t~~~al 192 (220)
T 1ub3_A 121 LKVILETGYFSPEEIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVA-QGRAQVK----A-AGG-IR-DRETAL 192 (220)
T ss_dssp EEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHH-TTSSEEE----E-ESS-CC-SHHHHH
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhh-CCCCeEE----E-ECC-CC-CHHHHH
Confidence 3467888888876 45567788999999998888899998 677777654 3345553 3 333 33 566666
Q ss_pred HHHHHHHHHHHcCCC
Q psy7930 83 IMALDCHQFVESGAD 97 (146)
Q Consensus 83 ~M~~dI~~~~~~Gad 97 (146)
.|. ++|++
T Consensus 193 ~~i-------~aGa~ 200 (220)
T 1ub3_A 193 RML-------KAGAS 200 (220)
T ss_dssp HHH-------HTTCS
T ss_pred HHH-------HCCCc
Confidence 666 38999
No 192
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=90.68 E-value=0.88 Score=35.73 Aligned_cols=69 Identities=20% Similarity=0.216 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCCEEEecCCC-CCCCCC----C-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAAL-SEGGLT----P-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l-~~GGlT----P-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
.+.+....+.+.+-+ ++..+ ...|.+ | ...+++.+++..++||.+- || - -|. +++..+.
T Consensus 156 ~e~~~~~~~~~~g~v-~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vg-----GG-I-~~~-------e~~~~~~ 220 (262)
T 1rd5_A 156 EDRMKEITKASEGFV-YLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVG-----FG-I-SKP-------EHVKQIA 220 (262)
T ss_dssp HHHHHHHHHHCCSCE-EEECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEE-----SC-C-CSH-------HHHHHHH
T ss_pred HHHHHHHHhcCCCeE-EEecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEE-----CC-c-CCH-------HHHHHHH
Confidence 445555566666555 44322 112321 2 2347888888889998761 22 1 112 5677788
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
++||||||+|
T Consensus 221 ~~GAdgvvVG 230 (262)
T 1rd5_A 221 QWGADGVIIG 230 (262)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 8999999999
No 193
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=90.22 E-value=6.8 Score=34.21 Aligned_cols=98 Identities=13% Similarity=0.081 Sum_probs=65.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
..+..|.++|++.|-+...++. . ..++.+.+ ..+..|.+=|-. ..+..|+.+.+..+ ++.+.++||
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd-----~-~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~---a~~l~~~Ga 172 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMND-----V-RNMQQALQAVKKMGAHAQGTLCY--TTSPVHNLQTWVDV---AQQLAELGV 172 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCC-----T-HHHHHHHHHHHHTTCEEEEEEEC--CCCTTCCHHHHHHH---HHHHHHTTC
T ss_pred HHHHHHHhCCcCEEEEEEecCH-----H-HHHHHHHHHHHHCCCEEEEEEEe--eeCCCCCHHHHHHH---HHHHHHCCC
Confidence 4567899999999998865433 2 22333322 246677666644 45577876665555 455678899
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEe
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFH 130 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFH 130 (146)
+-|.+. +-.|-.....+.+|+++.+ +.++-||
T Consensus 173 d~I~l~--DT~G~~~P~~v~~lv~~l~~~~~~~i~~H 207 (464)
T 2nx9_A 173 DSIALK--DMAGILTPYAAEELVSTLKKQVDVELHLH 207 (464)
T ss_dssp SEEEEE--ETTSCCCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CEEEEc--CCCCCcCHHHHHHHHHHHHHhcCCeEEEE
Confidence 977664 6677777888888877664 6788888
No 194
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=90.09 E-value=1.2 Score=37.07 Aligned_cols=81 Identities=21% Similarity=0.214 Sum_probs=50.9
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCC-----CCCHHH----HHHHHhh---CCCcEEEEEccCCCCCcccCH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGL-----TPTLGL----YRVIKRL---VLVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGl-----TPS~g~----i~~~~~~---~~ipv~vMIRP~R~gdF~Ys~ 78 (146)
.-=+|++|++++.++.+.|+|-|=.-=.|..||+ ..|..- ++++.+. ++-.|.||. .+|...- +
T Consensus 165 ~Ti~~v~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc---~gGpIst-p 240 (286)
T 2p10_A 165 LTTPYVFSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILS---HGGPIAN-P 240 (286)
T ss_dssp EECCEECSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEE---ESTTCCS-H
T ss_pred eEEEecCCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEe---cCCCCCC-H
Confidence 3347999999999999999999866656655543 335443 3333322 344555554 3444442 2
Q ss_pred HHHHHHHHHHHHHHHc--CCCEEEEe
Q psy7930 79 AEKEIMALDCHQFVES--GADGFVIG 102 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~--GadG~VfG 102 (146)
+|++.+.++ |++||.-+
T Consensus 241 -------eDv~~~l~~t~G~~G~~gA 259 (286)
T 2p10_A 241 -------EDARFILDSCQGCHGFYGA 259 (286)
T ss_dssp -------HHHHHHHHHCTTCCEEEES
T ss_pred -------HHHHHHHhcCCCccEEEee
Confidence 677777788 99999765
No 195
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=90.00 E-value=0.23 Score=38.13 Aligned_cols=87 Identities=20% Similarity=0.177 Sum_probs=48.1
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCC--CH---HHHHHHHhhC-----CCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTP--TL---GLYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S~---g~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
.+..+...+...|+|.|= +.....|+.++ +. ..++.+++.. ++|+.+- || -. . +
T Consensus 128 ~t~~e~~~~~~~~~d~vl-~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~-----GG-I~--~-------~ 191 (230)
T 1rpx_A 128 GTPLTAIEYVLDAVDLVL-IMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVD-----GG-VG--P-------K 191 (230)
T ss_dssp TCCGGGGTTTTTTCSEEE-EESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEE-----SS-CC--T-------T
T ss_pred CCCHHHHHHHHhhCCEEE-EEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEE-----CC-CC--H-------H
Confidence 455566666778899773 44333343333 32 3456666554 5675442 22 11 1 4
Q ss_pred HHHHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHH
Q psy7930 87 DCHQFVESGADGFVIG-ALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 87 dI~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~ 120 (146)
.+..+.+.|+||+|+| .+..... -.+++++|.+
T Consensus 192 n~~~~~~aGad~vvvgSaI~~a~d-p~~a~~~l~~ 225 (230)
T 1rpx_A 192 NAYKVIEAGANALVAGSAVFGAPD-YAEAIKGIKT 225 (230)
T ss_dssp THHHHHHHTCCEEEESHHHHTSSC-HHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEChhhhCCCC-HHHHHHHHHH
Confidence 6777888899999999 2332211 1345555543
No 196
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=89.94 E-value=0.89 Score=36.75 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=52.3
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCc-ccCHHHHHHHHHHHHHHHHcCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDF-VFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF-~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
-++.+.+-+++|||-|=+= | .|+..+++++.+.+++|++++..| ++.+ .+| .+.++++|+
T Consensus 170 ai~ra~a~~eAGAd~i~~e-----~--~~~~~~~~~i~~~~~~P~n~~~~~--~~~~p~~~----------~~eL~~lGv 230 (255)
T 2qiw_A 170 AIKRIKLMEQAGARSVYPV-----G--LSTAEQVERLVDAVSVPVNITAHP--VDGHGAGD----------LATLAGLGV 230 (255)
T ss_dssp HHHHHHHHHHHTCSEEEEC-----C--CCSHHHHHHHHTTCSSCBEEECBT--TTBBTTBC----------HHHHHHTTC
T ss_pred HHHHHHHHHHcCCcEEEEc-----C--CCCHHHHHHHHHhCCCCEEEEecC--CCCCCCCC----------HHHHHHcCC
Confidence 3567888899999988772 2 389999999999999999988777 3311 133 356778999
Q ss_pred CEEEEeee
Q psy7930 97 DGFVIGAL 104 (146)
Q Consensus 97 dG~VfG~L 104 (146)
+-+.+|..
T Consensus 231 ~~v~~~~~ 238 (255)
T 2qiw_A 231 RRVTFGPL 238 (255)
T ss_dssp CEEECTTH
T ss_pred CEEEEHHH
Confidence 99999965
No 197
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=89.92 E-value=2.3 Score=33.95 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=54.4
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCC-cEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLV-PVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFV 100 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~i-pv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V 100 (146)
+..|.+.|||-|-.-. |.+...++.+++.+++ ||.+ -||-=.-+.+++..| ++.+.+.||+|+.
T Consensus 165 ~~~a~~~GAD~vkt~~-------~~~~e~~~~~~~~~~~~pV~a-----sGGi~~~~~~~~l~~---i~~~~~aGA~Gvs 229 (263)
T 1w8s_A 165 ARIALELGADAMKIKY-------TGDPKTFSWAVKVAGKVPVLM-----SGGPKTKTEEDFLKQ---VEGVLEAGALGIA 229 (263)
T ss_dssp HHHHHHHTCSEEEEEC-------CSSHHHHHHHHHHTTTSCEEE-----ECCSCCSSHHHHHHH---HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEEEcC-------CCCHHHHHHHHHhCCCCeEEE-----EeCCCCCCHHHHHHH---HHHHHHcCCeEEE
Confidence 5778999999977652 2378999999988877 8544 255321245555554 5555679999999
Q ss_pred Eee--ecCCCCcCHHHHHHHHHHhC
Q psy7930 101 IGA--LTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 101 fG~--L~~dg~iD~~~~~~Li~~a~ 123 (146)
+|- +..+ . -...+++|.+..+
T Consensus 230 vgraI~~~~-d-p~~~~~~l~~~v~ 252 (263)
T 1w8s_A 230 VGRNVWQRR-D-ALKFARALAELVY 252 (263)
T ss_dssp ESHHHHTST-T-HHHHHHHHHHHHC
T ss_pred EehhhcCCc-C-HHHHHHHHHHHHh
Confidence 994 2332 1 1445555555544
No 198
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=89.90 E-value=0.88 Score=34.01 Aligned_cols=67 Identities=27% Similarity=0.226 Sum_probs=41.7
Q ss_pred CHHH-HHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhCCCcEEEE--EccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 18 SVAS-ALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLVLVPVFVM--IRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 18 s~~~-a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~~ipv~vM--IRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
|+++ +..+.+.|+|-+-+--.. ..+|..|--..++++++. ++|+.+- |+| - ++..+.
T Consensus 115 ~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~~-~~pi~v~GGI~~-~----------------~~~~~~ 176 (207)
T 3ajx_A 115 DKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEKA-RVPFSVAGGVKV-A----------------TIPAVQ 176 (207)
T ss_dssp SHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHHH-TSCEEEESSCCG-G----------------GHHHHH
T ss_pred ChHHHHHHHHHhCCCEEEEEecccccccCCCchHHHHHHhhCC-CCCEEEECCcCH-H----------------HHHHHH
Confidence 5555 666778899988443222 124554433334444332 6787654 444 1 777888
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
+.|||++|+|
T Consensus 177 ~aGad~vvvG 186 (207)
T 3ajx_A 177 KAGAEVAVAG 186 (207)
T ss_dssp HTTCSEEEES
T ss_pred HcCCCEEEEe
Confidence 9999999999
No 199
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=89.80 E-value=0.34 Score=38.93 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=45.8
Q ss_pred HHHHHHcCCCEEEecCCC-------------------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCc
Q psy7930 22 ALAAVRGGADRLELCAAL-------------------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDF 74 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l-------------------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF 74 (146)
|..+++.|+|-|.+-... ..||++. +...++++++.+ ++||... ||
T Consensus 178 a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~-----GG-- 250 (311)
T 1jub_A 178 AEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGT-----GG-- 250 (311)
T ss_dssp HHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEE-----SS--
T ss_pred HHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEE-----CC--
Confidence 678888999998876432 1355543 367888888888 8997653 44
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
..|.+ |+..+..+|||+|.+|
T Consensus 251 I~~~~-------da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 251 IETGQ-------DAFEHLLCGATMLQIG 271 (311)
T ss_dssp CCSHH-------HHHHHHHHTCSEEEEC
T ss_pred CCCHH-------HHHHHHHcCCCEEEEc
Confidence 33443 4445456799999998
No 200
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=89.77 E-value=0.19 Score=40.47 Aligned_cols=83 Identities=22% Similarity=0.146 Sum_probs=46.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCC--C---CCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEG--G---LTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~G--G---lTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
||.-.+..|.+.|-+-+-|...+... . -++....++...+.++||.++.=-| +. .++|++.|.+-+
T Consensus 16 DSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~--g~----~~~e~e~l~~~l--- 86 (237)
T 3rjz_A 16 DSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQ--GE----KEKEVEDLKRVL--- 86 (237)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------------CHHHHHHHH---
T ss_pred HHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECC--CC----chHHHHHHHHHH---
Confidence 34455566788886555553322222 1 2456677888888889998766444 21 245666665544
Q ss_pred HHcCCCEEEEeeecCCC
Q psy7930 92 VESGADGFVIGALTGEQ 108 (146)
Q Consensus 92 ~~~GadG~VfG~L~~dg 108 (146)
+++|++++|||.+..+.
T Consensus 87 ~~~~i~~vv~Gdi~s~y 103 (237)
T 3rjz_A 87 SGLKIQGIVAGALASKY 103 (237)
T ss_dssp TTSCCSEEECC---CCS
T ss_pred HhcCCcEEEECCcchHH
Confidence 45599999999998653
No 201
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=89.74 E-value=1.7 Score=36.11 Aligned_cols=112 Identities=17% Similarity=0.080 Sum_probs=65.6
Q ss_pred HHHHHHHHHcCCCEEEecC-CCCCCCCCC-----CHHHHHHHHhhCCCcEEEEEc-----cC-CCCCcccCHHH-----H
Q psy7930 19 VASALAAVRGGADRLELCA-ALSEGGLTP-----TLGLYRVIKRLVLVPVFVMIR-----VR-AGFDFVFSQAE-----K 81 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~-~l~~GGlTP-----S~g~i~~~~~~~~ipv~vMIR-----P~-R~gdF~Ys~~E-----~ 81 (146)
.+.+..|.+.|.+-|||.. .+...+.++ ....+++..+..++.|.++-- |. ..|+|.-.+.+ +
T Consensus 36 ~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~~i 115 (394)
T 1xla_A 36 VEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFAL 115 (394)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHHHHHHHH
Confidence 3456678889999999986 222233322 133344444455776654321 10 13456544333 5
Q ss_pred HHHHHHHHHHHHcCCCEEEE--eeec--CCCCcC--------HHHHHHHHHHhC--C--CCeEEe
Q psy7930 82 EIMALDCHQFVESGADGFVI--GALT--GEQEID--------IEFIRQLKTIIG--D--RPITFH 130 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~Vf--G~L~--~dg~iD--------~~~~~~Li~~a~--~--~~vtFH 130 (146)
+.+++-|+.++++|++-+|+ |.-. ..+..+ .+.+++|.+.|. | +.+.+|
T Consensus 116 ~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE 180 (394)
T 1xla_A 116 AKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALE 180 (394)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 78999999999999999998 3210 001233 345666666664 5 666665
No 202
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.71 E-value=3 Score=34.78 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCCCEEEecCCC--C-CCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 19 VASALAAVRGGADRLELCAAL--S-EGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l--~-~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.+.+..+.+.|+|-+++-.+- . .++.+.+...++.+++..++||.+ - .+.|.+ |++.+.++|
T Consensus 168 ~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~---g-----gi~t~e-------~a~~~~~~G 232 (393)
T 2qr6_A 168 REIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPVIA---G-----GVNDYT-------TALHMMRTG 232 (393)
T ss_dssp HHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCEEE---E-----CCCSHH-------HHHHHHTTT
T ss_pred HHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCEEE---C-----CcCCHH-------HHHHHHHcC
Confidence 344566678899999875321 1 122111344577888888999877 2 234443 467788899
Q ss_pred CCEEEEee-------ecCCCCcCHHHHHHHHHH
Q psy7930 96 ADGFVIGA-------LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 96 adG~VfG~-------L~~dg~iD~~~~~~Li~~ 121 (146)
+|+|++|. ++.-|.-..+.+.++.++
T Consensus 233 ad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~ 265 (393)
T 2qr6_A 233 AVGIIVGGGENTNSLALGMEVSMATAIADVAAA 265 (393)
T ss_dssp CSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHH
T ss_pred CCEEEECCCcccccccCCCCCChHHHHHHHHHH
Confidence 99999974 111134455666666555
No 203
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=89.60 E-value=0.83 Score=35.67 Aligned_cols=72 Identities=24% Similarity=0.201 Sum_probs=45.7
Q ss_pred eeEEEecCHH----HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 11 TLEVCVDSVA----SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 11 ~lEvcv~s~~----~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
++|.+--+.+ -+..++++|||-|-.......||. +...++.+++.+ ++||.. -||=. |.++...|
T Consensus 123 i~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga--~~~~i~~v~~~v~~~ipVia-----~GGI~--t~~da~~~ 193 (225)
T 1mzh_A 123 IVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGT--TLEEVRLIKSSAKGRIKVKA-----SGGIR--DLETAISM 193 (225)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCC--CHHHHHHHHHHHTTSSEEEE-----ESSCC--SHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCC--CHHHHHHHHHHhCCCCcEEE-----ECCCC--CHHHHHHH
Confidence 4444444443 377888899999965555555663 567788887776 577654 35533 44444444
Q ss_pred HHHHHHHHHcCCCE
Q psy7930 85 ALDCHQFVESGADG 98 (146)
Q Consensus 85 ~~dI~~~~~~GadG 98 (146)
. ++|||-
T Consensus 194 l-------~aGA~~ 200 (225)
T 1mzh_A 194 I-------EAGADR 200 (225)
T ss_dssp H-------HTTCSE
T ss_pred H-------HhCchH
Confidence 4 689994
No 204
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=89.56 E-value=2.7 Score=33.86 Aligned_cols=84 Identities=17% Similarity=0.169 Sum_probs=60.9
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFV 100 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V 100 (146)
=|..++++ |.=|-.... .-=..+|+..++.+++.+++||. |- ||..++.+ |..++.+|||++.
T Consensus 66 iA~~y~~~-A~~IsVlTd--~~~F~gs~~dL~~ir~~v~lPvL---rK----Dfi~~~~q-------i~ea~~~GAD~il 128 (251)
T 1i4n_A 66 FIRMYDEL-ADAISILTE--KHYFKGDPAFVRAARNLTCRPIL---AK----DFYIDTVQ-------VKLASSVGADAIL 128 (251)
T ss_dssp HHHHHHHH-CSEEEEECC--CSSSCCCTHHHHHHHTTCCSCEE---EE----CCCCSTHH-------HHHHHHTTCSEEE
T ss_pred HHHHHHHh-CCceEEEec--ccccCCCHHHHHHHHHhCCCCEE---Ee----eCCCCHHH-------HHHHHHcCCCEEE
Confidence 45666677 988877642 22334588999999999999974 55 48877653 4558999999986
Q ss_pred EeeecCCCCcCHHHHHHHHHHhCCC
Q psy7930 101 IGALTGEQEIDIEFIRQLKTIIGDR 125 (146)
Q Consensus 101 fG~L~~dg~iD~~~~~~Li~~a~~~ 125 (146)
+=+= .++.+.+++|++.|+.+
T Consensus 129 Li~a----~l~~~~l~~l~~~a~~l 149 (251)
T 1i4n_A 129 IIAR----ILTAEQIKEIYEAAEEL 149 (251)
T ss_dssp EEGG----GSCHHHHHHHHHHHHTT
T ss_pred Eecc----cCCHHHHHHHHHHHHHc
Confidence 5331 36778999999999744
No 205
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=89.51 E-value=1.5 Score=36.74 Aligned_cols=101 Identities=17% Similarity=0.104 Sum_probs=60.2
Q ss_pred HHHHHHHHcCCCEEEecCC--------------C---CCCCCC-----CCHHHHHHHHhhCCC-cEEEEEccCCCCCcc-
Q psy7930 20 ASALAAVRGGADRLELCAA--------------L---SEGGLT-----PTLGLYRVIKRLVLV-PVFVMIRVRAGFDFV- 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~--------------l---~~GGlT-----PS~g~i~~~~~~~~i-pv~vMIRP~R~gdF~- 75 (146)
+.|..|.++|+|-|||..+ . .-||-- =...+++.+++.++- ||-|=|+| . +.|.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~-~-~~~~~ 242 (365)
T 2gou_A 165 QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAP-L-TTLNG 242 (365)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECS-S-CCTTS
T ss_pred HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcc-c-cccCC
Confidence 5667789999999999642 1 123420 023567778877743 88777777 3 2221
Q ss_pred -cCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCC--CcCHHHHHHHHHHh
Q psy7930 76 -FSQAEKEIMALDCHQFVESGADGFVIGALTGEQ--EIDIEFIRQLKTII 122 (146)
Q Consensus 76 -Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg--~iD~~~~~~Li~~a 122 (146)
-.....+...+=++.+.+.|+|.+.+..=+-++ ....+.++++.+..
T Consensus 243 ~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~ 292 (365)
T 2gou_A 243 TVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY 292 (365)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHC
Confidence 112234445555777889999999987532111 13455566665554
No 206
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=89.46 E-value=0.45 Score=37.55 Aligned_cols=86 Identities=10% Similarity=0.081 Sum_probs=57.8
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH-
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE- 93 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~- 93 (146)
+.|++++..|.+.|||-|-+=-.-..|| ...++.+++.+ ++|+. | -||= |. +.+..+.+
T Consensus 126 ~~t~~e~~~A~~~Gad~vk~FPa~~~~G----~~~lk~i~~~~~~ipvv----a-iGGI---~~-------~N~~~~l~~ 186 (225)
T 1mxs_A 126 ISTPSEIMMGYALGYRRFKLFPAEISGG----VAAIKAFGGPFGDIRFC----P-TGGV---NP-------ANVRNYMAL 186 (225)
T ss_dssp ECSHHHHHHHHTTTCCEEEETTHHHHTH----HHHHHHHHTTTTTCEEE----E-BSSC---CT-------TTHHHHHHS
T ss_pred eCCHHHHHHHHHCCCCEEEEccCccccC----HHHHHHHHhhCCCCeEE----E-ECCC---CH-------HHHHHHHhc
Confidence 7899999999999999999822001122 56788888777 67763 5 5662 11 35667888
Q ss_pred cCCCEEEEeeecCCC---CcCHHHHHHHHH
Q psy7930 94 SGADGFVIGALTGEQ---EIDIEFIRQLKT 120 (146)
Q Consensus 94 ~GadG~VfG~L~~dg---~iD~~~~~~Li~ 120 (146)
.|++|+..+.|.+.. .=|.+.++++.+
T Consensus 187 ~Ga~~v~gSai~~~~~i~~~~~~~i~~~a~ 216 (225)
T 1mxs_A 187 PNVMCVGTTWMLDSSWIKNGDWARIEACSA 216 (225)
T ss_dssp TTBCCEEECTTSCHHHHHTTCHHHHHHHHH
T ss_pred cCCEEEEEchhcCchhhccCCHHHHHHHHH
Confidence 699999988887632 124555555543
No 207
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=89.22 E-value=0.39 Score=42.56 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=71.1
Q ss_pred HHHHHHHHcCCCEEEecCCCC--------CCCCCCCHHHHHHHHhhCC-CcEEEEEccCC--------------------
Q psy7930 20 ASALAAVRGGADRLELCAALS--------EGGLTPTLGLYRVIKRLVL-VPVFVMIRVRA-------------------- 70 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~--------~GGlTPS~g~i~~~~~~~~-ipv~vMIRP~R-------------------- 70 (146)
+++....+.|||+|-+.+... -++..-...+++++.+..+ =.|.++|=+||
T Consensus 351 ~~a~~~l~aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~ 430 (555)
T 1jvn_A 351 EVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPG 430 (555)
T ss_dssp HHHHHHHHHTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCC
T ss_pred HHHHHHHHcCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccC
Confidence 559999999999999997542 2223334567888877664 24777876622
Q ss_pred -CCC-----cccCHH-----HHHHHHHHHHHHHHcCCCEEEEeeecCCCC---cCHHHHHHHHHHhCCCCeE
Q psy7930 71 -GFD-----FVFSQA-----EKEIMALDCHQFVESGADGFVIGALTGEQE---IDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 71 -~gd-----F~Ys~~-----E~~~M~~dI~~~~~~GadG~VfG~L~~dg~---iD~~~~~~Li~~a~~~~vt 128 (146)
.|. .+|+.. ++.. .+-++.+.++|++.|++--.+.||. .|.+.++++.++. +.||+
T Consensus 431 ~~g~~~~~~~v~~~Gw~~~~~~~~-~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d~~li~~l~~~~-~iPVI 500 (555)
T 1jvn_A 431 PNGEKYCWYQCTIKGGRESRDLGV-WELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAV-KIPVI 500 (555)
T ss_dssp TTCCCEEEEEEEETTTTEEEEEEH-HHHHHHHHHTTCCEEEECCGGGTTTCSCCCHHHHHHHHHHC-SSCEE
T ss_pred CCCCcceeEEEEEecCccCCCCCH-HHHHHHHHHcCCCEEEEeCCCCCCCCCCCCHHHHHHHHHhC-CccEE
Confidence 232 333211 0111 2457788899999999866677765 7999999998765 45554
No 208
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=89.19 E-value=7.3 Score=31.09 Aligned_cols=107 Identities=18% Similarity=0.164 Sum_probs=68.0
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHH----HHHHHHhhC-CCcEEEEEccC-CCCCc-ccCHHHHHHHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLG----LYRVIKRLV-LVPVFVMIRVR-AGFDF-VFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g----~i~~~~~~~-~ipv~vMIRP~-R~gdF-~Ys~~E~~~M~~dI~~~~~ 93 (146)
.+..+.+.|||=|||.-.+-.. .. +.. .++.+++.. ++|+.+-+|++ -||.| ..++++.-.+.+ .+.+
T Consensus 37 ~~~~~~~~~~D~vElRvD~l~~-~~-~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~~ll~---~~~~ 111 (257)
T 2yr1_A 37 EAEEVCRKQPDLLEWRADFFRA-ID-DQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAEVRRLIE---AICR 111 (257)
T ss_dssp HHHHHHHSCCSEEEEEGGGCTT-TT-CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHHHHHHHH---HHHH
T ss_pred HHHHHhhcCCCEEEEEeecccc-cC-cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHHHHHHHH---HHHH
Confidence 3445566799999999876533 22 333 445566666 89999999973 35667 778877666544 4556
Q ss_pred cC-CCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEee-cccCCCC
Q psy7930 94 SG-ADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHR-AFDVVRE 138 (146)
Q Consensus 94 ~G-adG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHR-AFD~~~d 138 (146)
+| +|-+=+=. ..+. ..+++++.++ +..+..+- =|+.+++
T Consensus 112 ~g~~d~iDvEl-----~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~ 154 (257)
T 2yr1_A 112 SGAIDLVDYEL-----AYGE-RIADVRRMTEECSVWLVVSRHYFDGTPR 154 (257)
T ss_dssp HTCCSEEEEEG-----GGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCC
T ss_pred cCCCCEEEEEC-----CCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcC
Confidence 67 78665542 1222 6667887553 55555444 4677664
No 209
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.15 E-value=1.8 Score=35.28 Aligned_cols=72 Identities=21% Similarity=0.261 Sum_probs=46.6
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC-----CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP-----TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP-----S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
+.+.+....+.+.+-|=+.+....-|.+. -..+++.+++..++||.| +|--+.. ++++...
T Consensus 162 ~~eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v--------GfGIst~------e~~~~~~ 227 (271)
T 3nav_A 162 SDETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALL--------GFGISEP------AQVKQAI 227 (271)
T ss_dssp CHHHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEE--------CSSCCSH------HHHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEE--------ECCCCCH------HHHHHHH
Confidence 35777778888888887777665555542 146788888888899876 2444321 3455567
Q ss_pred HcCCCEEEEee
Q psy7930 93 ESGADGFVIGA 103 (146)
Q Consensus 93 ~~GadG~VfG~ 103 (146)
+.||||+|+|=
T Consensus 228 ~~gADgvIVGS 238 (271)
T 3nav_A 228 EAGAAGAISGS 238 (271)
T ss_dssp HTTCSEEEESH
T ss_pred HcCCCEEEECH
Confidence 78999999993
No 210
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=89.14 E-value=0.91 Score=36.45 Aligned_cols=87 Identities=16% Similarity=0.206 Sum_probs=59.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.|++-+..|...|+|-|=|-- +.|..|...+...+.....-+..++||. .+.+- .||+.+.+.|+
T Consensus 25 ~~p~~~e~a~~~g~D~vilDl---Ehav~~~~k~~~~l~a~~~~~~~~~VRV-n~~~~-----------~di~~~ld~G~ 89 (261)
T 3qz6_A 25 YNPDIVRIYAEAGLDYFIVDC---EHAAYTFREINHLVSVAKNAGVSVLVRI-PQVDR-----------AHVQRLLDIGA 89 (261)
T ss_dssp CCTTHHHHHHHTTCSEEEEES---SSSCCCHHHHHHHHHHHHHHTCEEEEEC-SSCCH-----------HHHHHHHHHTC
T ss_pred CCHHHHHHHhcCCcCEEEEec---cCCCCCHHHHHHHHHHHhhcCCeEEEEe-CCCCH-----------HHHHHHHhcCC
Confidence 678889999999999998863 4666666555444433222356779997 55542 38999999999
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+||++=..+ +.+..++++++++
T Consensus 90 ~gI~lP~v~-----saed~~~~~~~~~ 111 (261)
T 3qz6_A 90 EGFMIPGVQ-----SAETMRETVRLAK 111 (261)
T ss_dssp CEEEETTCC-----SHHHHHHHHHHHS
T ss_pred CEEEECCcC-----CHHHHHHHHHHhc
Confidence 999876443 2445566666653
No 211
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=89.11 E-value=1.1 Score=35.97 Aligned_cols=84 Identities=11% Similarity=0.061 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
.+-|....+.||+.+-+.. +.| +...+++++.+...+||.+ ||+-. + + |++.+. +||+-
T Consensus 41 ~~~A~~~~~~Ga~~l~vvD---L~~--~n~~~i~~i~~~~~~pv~v------gGGir-~------~--~~~~~l-~Ga~~ 99 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIK---LGP--NNDDAAREALQESPQFLQV------GGGIN-D------T--NCLEWL-KWASK 99 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEE---ESS--SCHHHHHHHHHHSTTTSEE------ESSCC-T------T--THHHHT-TTCSC
T ss_pred HHHHHHHHHcCCCEEEEEe---CCC--CCHHHHHHHHhcCCceEEE------eCCCC-H------H--HHHHHh-cCCCE
Confidence 3456888899999998864 123 7899999999999999874 44443 2 1 666777 99999
Q ss_pred EEEeee-cCC-CCcCHHHHHHHHHHhC
Q psy7930 99 FVIGAL-TGE-QEIDIEFIRQLKTIIG 123 (146)
Q Consensus 99 ~VfG~L-~~d-g~iD~~~~~~Li~~a~ 123 (146)
|++|.- -.| |.++.+.++++++..+
T Consensus 100 Viigs~a~~~~g~~~p~~~~~~~~~~g 126 (260)
T 2agk_A 100 VIVTSWLFTKEGHFQLKRLERLTELCG 126 (260)
T ss_dssp EEECGGGBCTTCCBCHHHHHHHHHHHC
T ss_pred EEECcHHHhhcCCCCHHHHHHHHHHhC
Confidence 999974 234 8999999999999876
No 212
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=88.99 E-value=0.87 Score=35.09 Aligned_cols=72 Identities=19% Similarity=0.238 Sum_probs=43.1
Q ss_pred cCHHHHHHHHHcCCCEEEecCCC-CCCCCC----C-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAAL-SEGGLT----P-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l-~~GGlT----P-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
.+..+...+...+++.+=.+-.. ..+|.. | ....++++++..++||.+ -|| -. +. +++..
T Consensus 143 ~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~-----~GG-I~-~~-------e~i~~ 208 (248)
T 1geq_A 143 NTPDERLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAV-----GFG-VS-KR-------EHVVS 208 (248)
T ss_dssp TCCHHHHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHHHCSSCEEE-----ESC-CC-SH-------HHHHH
T ss_pred CCHHHHHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEE-----Eee-cC-CH-------HHHHH
Confidence 35667777777778733322222 112221 3 256888888888888754 233 22 11 46777
Q ss_pred HHHcCCCEEEEe
Q psy7930 91 FVESGADGFVIG 102 (146)
Q Consensus 91 ~~~~GadG~VfG 102 (146)
+.++|+|||++|
T Consensus 209 ~~~~Gad~vivG 220 (248)
T 1geq_A 209 LLKEGANGVVVG 220 (248)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCCCEEEEc
Confidence 778999999999
No 213
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=88.56 E-value=1.3 Score=37.06 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC-----CHHHHHHHHhhCC-CcEEEEEccCCCCCcc-
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP-----TLGLYRVIKRLVL-VPVFVMIRVRAGFDFV- 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP-----S~g~i~~~~~~~~-ipv~vMIRP~R~gdF~- 75 (146)
+.|..|+++|+|=|||..+- .-||--- ...+++.+++.++ -||-|=|+| . ..|.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~-~-~~~~~ 242 (364)
T 1vyr_A 165 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSP-I-GTFQN 242 (364)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECC-S-SCBTT
T ss_pred HHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcc-c-ccccc
Confidence 56777899999999995420 1133100 2446788888774 377666666 2 2132
Q ss_pred --cCHHHHHHHHHHHHHHHHcCCCEEEEeeecCC--CCcCHHHHHHHHHHh
Q psy7930 76 --FSQAEKEIMALDCHQFVESGADGFVIGALTGE--QEIDIEFIRQLKTII 122 (146)
Q Consensus 76 --Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~d--g~iD~~~~~~Li~~a 122 (146)
-.....+...+=++.+.+.|+|.+.+..=+-. -..+.+.++++.+..
T Consensus 243 ~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~ 293 (364)
T 1vyr_A 243 VDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERF 293 (364)
T ss_dssp BCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHC
T ss_pred ccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHC
Confidence 11224445555677888999999988752211 123556666665554
No 214
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.43 E-value=1.6 Score=32.71 Aligned_cols=94 Identities=15% Similarity=0.224 Sum_probs=56.5
Q ss_pred EEEec--CHHHHHHHHH---cCCCEEEecCCCCCCCCCCCHHHHHHHHhh-CCCcEE--EEEccCCCCCcccCHHHHHHH
Q psy7930 13 EVCVD--SVASALAAVR---GGADRLELCAALSEGGLTPTLGLYRVIKRL-VLVPVF--VMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 13 Evcv~--s~~~a~~A~~---~GAdRIELc~~l~~GGlTPS~g~i~~~~~~-~~ipv~--vMIRP~R~gdF~Ys~~E~~~M 84 (146)
=+|.| +++++....+ .|+|-||+=-.+. ++-....++++++. .++||+ .|+.+ +. .
T Consensus 4 i~a~D~~~~~~~~~~~~~~~~~~diie~G~p~~---~~~g~~~i~~ir~~~~~~~i~~~~~~~~--~~------~----- 67 (211)
T 3f4w_A 4 QLALDELTLPEAMVFMDKVVDDVDIIEVGTPFL---IREGVNAIKAIKEKYPHKEVLADAKIMD--GG------H----- 67 (211)
T ss_dssp EEEECSCCHHHHHHHHHHHGGGCSEEEECHHHH---HHHTTHHHHHHHHHCTTSEEEEEEEECS--CH------H-----
T ss_pred EEEeCCCCHHHHHHHHHHhhcCccEEEeCcHHH---HhccHHHHHHHHHhCCCCEEEEEEEecc--ch------H-----
Confidence 34554 4554444332 5899999743110 11225789999887 488874 34443 21 1
Q ss_pred HHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeE
Q psy7930 85 ALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPIT 128 (146)
Q Consensus 85 ~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vt 128 (146)
..++.++++|+|+++++.+.. .+.++++++.++ ++++.
T Consensus 68 -~~~~~~~~~Gad~v~v~~~~~-----~~~~~~~~~~~~~~g~~~~ 107 (211)
T 3f4w_A 68 -FESQLLFDAGADYVTVLGVTD-----VLTIQSCIRAAKEAGKQVV 107 (211)
T ss_dssp -HHHHHHHHTTCSEEEEETTSC-----HHHHHHHHHHHHHHTCEEE
T ss_pred -HHHHHHHhcCCCEEEEeCCCC-----hhHHHHHHHHHHHcCCeEE
Confidence 237889999999999987642 345566666665 44443
No 215
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=88.41 E-value=2 Score=34.44 Aligned_cols=112 Identities=14% Similarity=0.181 Sum_probs=71.5
Q ss_pred cCHHH----HHHHHHcCCCEEEecCCCCCCCCCCCHH----HHHHHHhhC-CCcEEEEEccCC-CCCcccCHHHHHHHHH
Q psy7930 17 DSVAS----ALAAVRGGADRLELCAALSEGGLTPTLG----LYRVIKRLV-LVPVFVMIRVRA-GFDFVFSQAEKEIMAL 86 (146)
Q Consensus 17 ~s~~~----a~~A~~~GAdRIELc~~l~~GGlTPS~g----~i~~~~~~~-~ipv~vMIRP~R-~gdF~Ys~~E~~~M~~ 86 (146)
.|.++ +..+...|||=|||.-.+-.. .|+.. .+..+++.. ++|+.+-+|+.. ||-|..++++...+..
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vElR~D~l~~--~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll~ 106 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEWRVDFFEN--VENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLNK 106 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEEEGGGCTT--TTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeeccccc--cCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHHH
Confidence 55544 455667899999999876543 23443 344444444 799999999833 5678888887766554
Q ss_pred HHHHHHHcC-CCEEEEeeecCCCCcCHHHHHHHHHHhC--CCC--eEEeecccCCCCc
Q psy7930 87 DCHQFVESG-ADGFVIGALTGEQEIDIEFIRQLKTIIG--DRP--ITFHRAFDVVREP 139 (146)
Q Consensus 87 dI~~~~~~G-adG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~--vtFHRAFD~~~d~ 139 (146)
. +.+.| +|-+=+ +-..+.+..+++++.++ +.. +.+| =|+.+++.
T Consensus 107 ~---~~~~~~~d~iDv-----El~~~~~~~~~l~~~a~~~~~kiI~S~H-df~~TP~~ 155 (258)
T 4h3d_A 107 E---ISNTGLVDLIDV-----ELFMGDEVIDEVVNFAHKKEVKVIISNH-DFNKTPKK 155 (258)
T ss_dssp H---HHHTTCCSEEEE-----EGGGCHHHHHHHHHHHHHTTCEEEEEEE-ESSCCCCH
T ss_pred H---HHhcCCchhhHH-----hhhccHHHHHHHHHHHHhCCCEEEEEEe-cCCCCCCH
Confidence 3 34445 554433 33456778889988765 444 3455 47776643
No 216
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=88.02 E-value=3.4 Score=31.00 Aligned_cols=84 Identities=17% Similarity=0.183 Sum_probs=52.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+.+..|.+.|||.|-| |...+. +..+++..+. +.+-+.| .|..| +..+.+.|+|.+
T Consensus 85 ~~~~~a~~~gad~v~l------~~~~~~---~~~~~~~~g~-~~~~~s~-------~t~~e-------~~~a~~~g~d~v 140 (227)
T 2tps_A 85 DDVELALNLKADGIHI------GQEDAN---AKEVRAAIGD-MILGVSA-------HTMSE-------VKQAEEDGADYV 140 (227)
T ss_dssp SCHHHHHHHTCSEEEE------CTTSSC---HHHHHHHHTT-SEEEEEE-------CSHHH-------HHHHHHHTCSEE
T ss_pred CHHHHHHHcCCCEEEE------CCCccC---HHHHHHhcCC-cEEEEec-------CCHHH-------HHHHHhCCCCEE
Confidence 3556788899999977 223344 4555554554 4455555 35544 334557899999
Q ss_pred EEeeecCC-------CCcCHHHHHHHHHHhCCCCe
Q psy7930 100 VIGALTGE-------QEIDIEFIRQLKTIIGDRPI 127 (146)
Q Consensus 100 VfG~L~~d-------g~iD~~~~~~Li~~a~~~~v 127 (146)
++|.+-+. ...+.+.++++.+...+.|+
T Consensus 141 ~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pv 175 (227)
T 2tps_A 141 GLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPI 175 (227)
T ss_dssp EECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCE
T ss_pred EECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCE
Confidence 99865442 24678888888765533554
No 217
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=87.96 E-value=1.1 Score=36.45 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=46.6
Q ss_pred HHHHHHcCCCEEEecCCC-------------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHH
Q psy7930 22 ALAAVRGGADRLELCAAL-------------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l-------------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
|..+++.|+|-|.+-... ..||++. +...++++++.+ ++||... || ..|.+
T Consensus 231 a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~-----GG--I~~~~- 302 (336)
T 1f76_A 231 ADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV-----GG--IDSVI- 302 (336)
T ss_dssp HHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE-----SS--CCSHH-
T ss_pred HHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE-----CC--CCCHH-
Confidence 788999999999986532 2456542 347788888887 8998653 44 33443
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe
Q psy7930 81 KEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG 102 (146)
|+..+.++|||+|-+|
T Consensus 303 ------da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 303 ------AAREKIAAGASLVQIY 318 (336)
T ss_dssp ------HHHHHHHHTCSEEEES
T ss_pred ------HHHHHHHCCCCEEEee
Confidence 4455556799999988
No 218
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=87.91 E-value=0.7 Score=37.30 Aligned_cols=71 Identities=14% Similarity=0.166 Sum_probs=46.0
Q ss_pred CCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCC
Q psy7930 29 GADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGE 107 (146)
Q Consensus 29 GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~d 107 (146)
|-.-|=|-+ -|.|+...+++.+++.. ++|+.|= +| .-|.+ +++.+.+ ||||+|+|=.--+
T Consensus 159 g~~~vY~e~----sG~~g~~~~v~~ir~~~~~~pv~vG-----fG--I~~~e-------~a~~~~~-gAD~VVVGSai~~ 219 (235)
T 3w01_A 159 RLPVMYIEY----SGIYGDVSKVQAVSEHLTETQLFYG-----GG--ISSEQ-------QATEMAA-IADTIIVGDIIYK 219 (235)
T ss_dssp CCSEEEEEC----TTSCCCHHHHHHHHTTCSSSEEEEE-----SC--CCSHH-------HHHHHHT-TSSEEEECTHHHH
T ss_pred CCCEEEEec----CCCcCCHHHHHHHHHhcCCCCEEEE-----CC--cCCHH-------HHHHHHc-CCCEEEECCceec
Confidence 666666654 27788999999999988 8898662 22 22333 3344556 9999999943222
Q ss_pred CCcCHHHHHHHHHH
Q psy7930 108 QEIDIEFIRQLKTI 121 (146)
Q Consensus 108 g~iD~~~~~~Li~~ 121 (146)
|.+..+++++.
T Consensus 220 ---~~~~~~e~v~~ 230 (235)
T 3w01_A 220 ---DIKKALKTVKI 230 (235)
T ss_dssp ---CHHHHHHTTCC
T ss_pred ---CHHHHHHHHHH
Confidence 45555555543
No 219
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=87.33 E-value=0.54 Score=37.82 Aligned_cols=71 Identities=23% Similarity=0.188 Sum_probs=47.9
Q ss_pred CHHH----HHHHHHcC-CCEEEecCCC-------------------CCCCCCC------CHHHHHHHHhhC-CCcEEEEE
Q psy7930 18 SVAS----ALAAVRGG-ADRLELCAAL-------------------SEGGLTP------TLGLYRVIKRLV-LVPVFVMI 66 (146)
Q Consensus 18 s~~~----a~~A~~~G-AdRIELc~~l-------------------~~GGlTP------S~g~i~~~~~~~-~ipv~vMI 66 (146)
+.++ +..+++.| +|-|.+-... ..||++. +...++++++.+ ++||...
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~- 250 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGC- 250 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEE-
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEE-
Confidence 4555 77888999 9988765422 2355543 357888888888 8997543
Q ss_pred ccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 67 RVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 67 RP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
|| +.|.+ |+..+..+|||+|.+|
T Consensus 251 ----GG--I~~~~-------da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 251 ----GG--VYSGE-------DAFLHILAGASMVQVG 273 (314)
T ss_dssp ----SS--CCSHH-------HHHHHHHHTCSSEEEC
T ss_pred ----CC--CCCHH-------HHHHHHHcCCCEEEEc
Confidence 44 33443 4455556899999998
No 220
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=87.30 E-value=4.8 Score=33.13 Aligned_cols=76 Identities=22% Similarity=0.245 Sum_probs=53.6
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEE--ccCC----CCCccc---CHHHHHHHHHHHHHHHH
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMI--RVRA----GFDFVF---SQAEKEIMALDCHQFVE 93 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMI--RP~R----~gdF~Y---s~~E~~~M~~dI~~~~~ 93 (146)
....+.||+=|-|= ||.. ....++.+.+ .+|||.--| .| + -|+|.- ++++.+.+.+|.+.+.+
T Consensus 113 ~rl~kaGa~aVklE-----dg~~-~~~~i~~l~~-~GIpv~gHlgltP-q~~~~~gg~~vqgrt~~~a~~~i~rA~a~~e 184 (275)
T 3vav_A 113 VKLMRAGAQMVKFE-----GGEW-LAETVRFLVE-RAVPVCAHVGLTP-QSVHAFGGFKVQGKTEAGAAQLLRDARAVEE 184 (275)
T ss_dssp HHHHHTTCSEEEEE-----CCGG-GHHHHHHHHH-TTCCEEEEEESCG-GGHHHHC---CCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-----Cchh-HHHHHHHHHH-CCCCEEEecCCCc-eEEeccCCeEEEcCCHHHHHHHHHHHHHHHH
Confidence 44566799888763 5544 3567776655 589987655 35 3 255653 57888999999999999
Q ss_pred cCCCEEEEeeecC
Q psy7930 94 SGADGFVIGALTG 106 (146)
Q Consensus 94 ~GadG~VfG~L~~ 106 (146)
+||+++|+=++..
T Consensus 185 AGA~~ivlE~vp~ 197 (275)
T 3vav_A 185 AGAQLIVLEAVPT 197 (275)
T ss_dssp HTCSEEEEESCCH
T ss_pred cCCCEEEecCCCH
Confidence 9999999987753
No 221
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=87.30 E-value=0.6 Score=42.02 Aligned_cols=74 Identities=22% Similarity=0.399 Sum_probs=55.0
Q ss_pred CCcEEEEEcc---CCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEE----eeecC--CCCcCHHHHHHHHHHhC--CCCe
Q psy7930 59 LVPVFVMIRV---RAGFDFVFSQAEKEIMALDCHQFVESGADGFVI----GALTG--EQEIDIEFIRQLKTIIG--DRPI 127 (146)
Q Consensus 59 ~ipv~vMIRP---~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~Vf----G~L~~--dg~iD~~~~~~Li~~a~--~~~v 127 (146)
.+||+||.=- ...+.| ...+.|..+++.+|++|+|||.+ |+.-. .++.|...-++|.+.++ ++++
T Consensus 9 ~vpvyVMlPLd~V~~~~~~----~~~~~l~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKl 84 (535)
T 2xfr_A 9 YVQVYVMLPLDAVSVNNRF----EKGDELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKL 84 (535)
T ss_dssp CCEEEEECCTTSSCTTSCC----CCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEE
T ss_pred CccEEEeeecceecCCCee----CCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeE
Confidence 6899999854 012222 24578899999999999999998 55554 67899999999999997 6766
Q ss_pred EEeecccCC
Q psy7930 128 TFHRAFDVV 136 (146)
Q Consensus 128 tFHRAFD~~ 136 (146)
.-=+.|-+|
T Consensus 85 q~vmSFHqC 93 (535)
T 2xfr_A 85 QAIMSFHQC 93 (535)
T ss_dssp EEEEECSCB
T ss_pred EEEEEeeec
Confidence 545555544
No 222
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=87.25 E-value=4 Score=34.13 Aligned_cols=67 Identities=12% Similarity=-0.002 Sum_probs=48.9
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
++.+.+-+++|||-|=+= |+ |+...++++.+.+++|+.+.+-+ -+..-.++ .+.+.++|..-
T Consensus 192 i~Ra~Ay~eAGAd~i~~e------~~-~~~e~~~~i~~~l~~P~lan~~~-~g~~~~~~----------~~eL~~lGv~~ 253 (318)
T 1zlp_A 192 IRRANLYKEAGADATFVE------AP-ANVDELKEVSAKTKGLRIANMIE-GGKTPLHT----------PEEFKEMGFHL 253 (318)
T ss_dssp HHHHHHHHHTTCSEEEEC------CC-CSHHHHHHHHHHSCSEEEEEECT-TSSSCCCC----------HHHHHHHTCCE
T ss_pred HHHHHHHHHcCCCEEEEc------CC-CCHHHHHHHHHhcCCCEEEEecc-CCCCCCCC----------HHHHHHcCCeE
Confidence 457778899999987652 33 89999999999999998776665 33223445 44566778888
Q ss_pred EEEee
Q psy7930 99 FVIGA 103 (146)
Q Consensus 99 ~VfG~ 103 (146)
+.+|.
T Consensus 254 v~~~~ 258 (318)
T 1zlp_A 254 IAHSL 258 (318)
T ss_dssp EEECS
T ss_pred EEEch
Confidence 77774
No 223
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=87.23 E-value=5.1 Score=29.21 Aligned_cols=90 Identities=17% Similarity=0.187 Sum_probs=57.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCC-CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEG-GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~G-GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+-+..+...|+..+=+.+--..| |--+....++++.+..++|+.++ +| +. +.+|+..+.+.|++|
T Consensus 134 ~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~~~~Pvia~-----~g-~~--------~~~~~~~~~~~G~~~ 199 (237)
T 3cwo_X 134 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIAS-----GG-AG--------KMEHFLEAFLAGADA 199 (237)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGGCCSCEEEE-----SC-CC--------SHHHHHHHHHHTCSE
T ss_pred HHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHhcCCCEEec-----CC-CC--------CHHHHHHHHHcCcHH
Confidence 44566777788877544310122 22234778998888889998764 22 11 124455556689999
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+++|-.--.+.+|...+++.+...+
T Consensus 200 ~~vg~a~~~~~~~~~~~~~~l~~~~ 224 (237)
T 3cwo_X 200 ALAASVFHFREIDVRELKEYLKKHG 224 (237)
T ss_dssp EEESHHHHTTSSCHHHHHHHHHTTT
T ss_pred HhhhHHHHcCCCCHHHHHHHHHHCC
Confidence 9999655467789888887766443
No 224
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=87.19 E-value=3.3 Score=38.86 Aligned_cols=69 Identities=26% Similarity=0.350 Sum_probs=46.3
Q ss_pred HHHHHHcCCCEEEecCCCCC----C--C----CCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 22 ALAAVRGGADRLELCAALSE----G--G----LTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~----G--G----lTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
+..+++.|+|-|||+-+-.. + | ..| ...+++.+++.+++||.|=++| ... + +.+-++
T Consensus 654 a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~-~~~----~------~~~~a~ 722 (1025)
T 1gte_A 654 SRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTP-NVT----D------IVSIAR 722 (1025)
T ss_dssp HHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECS-CSS----C------HHHHHH
T ss_pred HHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCC-ChH----H------HHHHHH
Confidence 34455789999999753211 1 1 122 1347777788889999999999 332 1 334466
Q ss_pred HHHHcCCCEEEE
Q psy7930 90 QFVESGADGFVI 101 (146)
Q Consensus 90 ~~~~~GadG~Vf 101 (146)
.+.++|+|||++
T Consensus 723 ~~~~~G~d~i~v 734 (1025)
T 1gte_A 723 AAKEGGADGVTA 734 (1025)
T ss_dssp HHHHHTCSEEEE
T ss_pred HHHHcCCCEEEE
Confidence 778899999998
No 225
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=87.10 E-value=0.69 Score=37.19 Aligned_cols=46 Identities=20% Similarity=0.315 Sum_probs=34.8
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhCCCcEEEEE
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLVLVPVFVMI 66 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~~ipv~vMI 66 (146)
.|.+-+.+..++|||=|||-. ..|.|. ...+++++++ .++||..|.
T Consensus 21 ~t~~~~~~l~~~GaD~ielG~---S~Gvt~~~~~~~v~~ir~-~~~Pivlm~ 68 (240)
T 1viz_A 21 LPDEQLEILCESGTDAVIIGG---SDGVTEDNVLRMMSKVRR-FLVPCVLEV 68 (240)
T ss_dssp CCHHHHHHHHTSCCSEEEECC-------CHHHHHHHHHHHTT-SSSCEEEEC
T ss_pred ccHHHHHHHHHcCCCEEEECC---CCCCCHHHHHHHHHHhhC-cCCCEEEec
Confidence 345678888999999999986 377887 5778888888 899998775
No 226
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=87.06 E-value=2 Score=33.81 Aligned_cols=78 Identities=10% Similarity=-0.040 Sum_probs=49.7
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCC------CHHHHHHHHhhCCCcEEEEEcc--C-CCCCcccCHHH-----HHHHHHHH
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTP------TLGLYRVIKRLVLVPVFVMIRV--R-AGFDFVFSQAE-----KEIMALDC 88 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTP------S~g~i~~~~~~~~ipv~vMIRP--~-R~gdF~Ys~~E-----~~~M~~dI 88 (146)
..|.+.|.+-|||..... ...-| ....+++..+..++.+..+.-+ . +..+|.-.+.+ ++.+++-|
T Consensus 42 ~~a~~~G~~~vEl~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i 120 (316)
T 3qxb_A 42 LVRDDLGLEYVQYTYDLT-DPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLKRAI 120 (316)
T ss_dssp HHHHTSCCCEEEEETTTS-CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEeecccc-CccccccchhhHHHHHHHHHHHcCCeEEEeeccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 455789999999986421 11112 2445556666678988765432 0 11244433333 56789999
Q ss_pred HHHHHcCCCEEEE
Q psy7930 89 HQFVESGADGFVI 101 (146)
Q Consensus 89 ~~~~~~GadG~Vf 101 (146)
+.++++|++.+|+
T Consensus 121 ~~A~~lGa~~v~~ 133 (316)
T 3qxb_A 121 DMTAAMEVPATGM 133 (316)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEe
Confidence 9999999999874
No 227
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=87.05 E-value=1.2 Score=37.72 Aligned_cols=70 Identities=19% Similarity=0.240 Sum_probs=47.0
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCC--------------------CCCHHHHHHHHhhC-CCcEEEEEccCCCCCcc
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGL--------------------TPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGl--------------------TPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~ 75 (146)
.+.++|..+++.|||-|-+-.. ||+ .|+...+..++... ++||.+ -|| ..
T Consensus 218 ~s~e~A~~l~~aGad~I~V~g~---GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia-----~GG-I~ 288 (365)
T 3sr7_A 218 MDVKTIQTAIDLGVKTVDISGR---GGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILA-----SGG-IR 288 (365)
T ss_dssp CCHHHHHHHHHHTCCEEECCCB---C--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEE-----CSS-CC
T ss_pred CCHHHHHHHHHcCCCEEEEeCC---CCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEE-----eCC-CC
Confidence 6899999999999999988543 444 24445555554322 566543 233 33
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 76 FSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
.. .|+..+..+|||+|.+|-
T Consensus 289 ~g--------~Dv~KaLalGAdaV~ig~ 308 (365)
T 3sr7_A 289 HP--------LDIIKALVLGAKAVGLSR 308 (365)
T ss_dssp SH--------HHHHHHHHHTCSEEEESH
T ss_pred CH--------HHHHHHHHcCCCEEEECH
Confidence 32 577778889999999994
No 228
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=87.03 E-value=2.6 Score=35.56 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=50.7
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC------CHHHHHHHHhhCCC-cEEEEEccCCCCCcc
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP------TLGLYRVIKRLVLV-PVFVMIRVRAGFDFV 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP------S~g~i~~~~~~~~i-pv~vMIRP~R~gdF~ 75 (146)
+.|..|+++|+|-|||..+- .-|| +. ...+++.+++.++- ||-|=|+| . ..|.
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~avg~~~v~vrls~-~-~~~~ 246 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGG-SIENRARFPLEVVDAVAEVFGPERVGIRLTP-F-LELF 246 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-T-CCCT
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCc-chhhchHHHHHHHHHHHHHcCCCcEEEEecc-c-cccC
Confidence 56778899999999996420 1234 22 24567778877743 88777777 3 1121
Q ss_pred --cCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 76 --FSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 76 --Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
......+...+=++.+.+.|+|.+.+..
T Consensus 247 ~~~~~~~~~~~~~la~~le~~Gvd~i~v~~ 276 (377)
T 2r14_A 247 GLTDDEPEAMAFYLAGELDRRGLAYLHFNE 276 (377)
T ss_dssp TCCCSCHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 0112334445557788889999998853
No 229
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=87.03 E-value=0.84 Score=34.38 Aligned_cols=88 Identities=19% Similarity=0.162 Sum_probs=49.4
Q ss_pred cCHHHHHHHHHcCCCEEEecC-CCCCCCCCCCH---HHHHHHHhhC-----CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCA-ALSEGGLTPTL---GLYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~-~l~~GGlTPS~---g~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
.+..+...+...++|.|-+.+ +...+|.+-+. ..++.+++.. ++|+.+ =+ | -. . ++
T Consensus 119 ~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v--~G---G-I~--~-------~~ 183 (220)
T 2fli_A 119 GTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV--DG---G-VD--N-------KT 183 (220)
T ss_dssp TSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE--ES---S-CC--T-------TT
T ss_pred CCCHHHHHHHHhhCCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE--EC---c-CC--H-------HH
Confidence 455566666677899885522 33445544332 3355555543 566543 22 2 11 1 57
Q ss_pred HHHHHHcCCCEEEEee-ecCCCCcCH-HHHHHHHHH
Q psy7930 88 CHQFVESGADGFVIGA-LTGEQEIDI-EFIRQLKTI 121 (146)
Q Consensus 88 I~~~~~~GadG~VfG~-L~~dg~iD~-~~~~~Li~~ 121 (146)
+..++++|+||+|+|= +... -|. ++.++|.+.
T Consensus 184 ~~~~~~~Gad~vvvGsai~~~--~d~~~a~~~~~~~ 217 (220)
T 2fli_A 184 IRACYEAGANVFVAGSYLFKA--SDLVSQVQTLRTA 217 (220)
T ss_dssp HHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHhCC--CCHHHHHHHHHHH
Confidence 8788889999999992 3322 343 455555543
No 230
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=86.93 E-value=0.67 Score=37.76 Aligned_cols=69 Identities=22% Similarity=0.351 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCC--CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLT--PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlT--PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+-+..+++.|+|-|.+-..-..+|.+ |...+++++++ ++||.+ -|| .+|.++.+.+.+ +.||
T Consensus 143 ~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~-----~Gg--I~s~~da~~~l~------~~ga 207 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFV-----SGD--IFTPEDAKRALE------ESGC 207 (318)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEE-----ESS--CCSHHHHHHHHH------HHCC
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEE-----ECC--cCCHHHHHHHHH------cCCC
Confidence 477899999999999996544445544 35566666666 788743 244 345555544332 3699
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|+|.+|
T Consensus 208 d~V~iG 213 (318)
T 1vhn_A 208 DGLLVA 213 (318)
T ss_dssp SEEEES
T ss_pred CEEEEC
Confidence 999999
No 231
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.92 E-value=3.9 Score=32.42 Aligned_cols=88 Identities=15% Similarity=0.119 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCCEEEecCCC-CCCCCCC-----CHHHHHHHHhhCCCcEEEEEccCCCCCcccC-HHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAAL-SEGGLTP-----TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFS-QAEKEIMALDCHQF 91 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l-~~GGlTP-----S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys-~~E~~~M~~dI~~~ 91 (146)
.+.+....+.+.+.+ +|-.+ ..+|.+. ....++.+++..++||.| +|-.+ . +++..+
T Consensus 160 ~~~i~~i~~~~~g~v-~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~v--------ggGI~t~-------e~~~~~ 223 (268)
T 1qop_A 160 DDLLRQVASYGRGYT-YLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQ--------GFGISSP-------EQVSAA 223 (268)
T ss_dssp HHHHHHHHHHCCSCE-EEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEE--------ESSCCSH-------HHHHHH
T ss_pred HHHHHHHHhhCCCcE-EEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEE--------ECCCCCH-------HHHHHH
Confidence 455555555555566 44333 3445432 368999999988899766 23333 3 355666
Q ss_pred HHcCCCEEEEeee-----cCC-C--CcCHHHHHHHHHHh
Q psy7930 92 VESGADGFVIGAL-----TGE-Q--EIDIEFIRQLKTII 122 (146)
Q Consensus 92 ~~~GadG~VfG~L-----~~d-g--~iD~~~~~~Li~~a 122 (146)
...||||+|+|=- .++ + ..+.+.++++++..
T Consensus 224 ~~agAD~vVVGSai~~~~~~~~~~~~~~~~~~~~~~~~l 262 (268)
T 1qop_A 224 VRAGAAGAISGSAIVKIIEKNLASPKQMLAELRSFVSAM 262 (268)
T ss_dssp HHTTCSEEEECHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCCEEEEChHHhhhHhhcccCchHHHHHHHHHHHHH
Confidence 7889999999931 111 1 34556777777654
No 232
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=86.80 E-value=1.5 Score=37.25 Aligned_cols=66 Identities=18% Similarity=0.126 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.+-+..+.++|+|-|++-.+- |.++ -...++.+++.. ++||.+ . -+-|. ++.+.+.++|+
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~---G~~~~~~e~I~~ir~~~~~~~Vi~--G------~V~T~-------e~A~~a~~aGa 163 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAH---AHAKYVGKTLKSLRQLLGSRCIMA--G------NVATY-------AGADYLASCGA 163 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSC---CSSHHHHHHHHHHHHHHTTCEEEE--E------EECSH-------HHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEEeCCC---CCcHhHHHHHHHHHHhcCCCeEEE--c------CcCCH-------HHHHHHHHcCC
Confidence 567888999999999985432 3322 135777777765 677754 1 02232 35778889999
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|+|++|
T Consensus 164 D~I~Vg 169 (361)
T 3r2g_A 164 DIIKAG 169 (361)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 999997
No 233
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.80 E-value=1.6 Score=34.95 Aligned_cols=63 Identities=17% Similarity=0.116 Sum_probs=37.1
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCC----CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTP----TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTP----S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+.++.+.|.+.||.-+--+ +-..| ....++.+++..++|+.+++ | . .++|+.+.+.|++
T Consensus 32 ~~~L~~~Gv~~IE~g~~~~-~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~-n--------------~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 32 INRLSDCGYARIEATSFVS-PKWVPQLADSREVMAGIRRADGVRYSVLV-P-N--------------MKGYEAAAAAHAD 94 (295)
T ss_dssp HHHHTTTTCSEEEEEECSC-TTTCGGGTTHHHHHHHSCCCSSSEEEEEC-S-S--------------HHHHHHHHHTTCS
T ss_pred HHHHHHcCcCEEEEccCcC-ccccccccCHHHHHHHHHhCCCCEEEEEe-C-C--------------HHHHHHHHHCCCC
Confidence 4455667999999864211 22223 44555655554467887776 6 2 3556666666766
Q ss_pred EEEE
Q psy7930 98 GFVI 101 (146)
Q Consensus 98 G~Vf 101 (146)
.|-+
T Consensus 95 ~V~i 98 (295)
T 1ydn_A 95 EIAV 98 (295)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 234
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=86.45 E-value=3.6 Score=35.74 Aligned_cols=74 Identities=22% Similarity=0.236 Sum_probs=50.6
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccC-CCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVR-AGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~-R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
++..+.+.|||=|||+-.+-.. ..| ..-++.+++..++|+.+-+|++ .||.|..++++.-.. ++.+.++|++-+
T Consensus 22 ~~~~~~~~g~D~vElRvD~l~~-~~~-~~~l~~l~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~l---l~~~~~~~~~yi 96 (523)
T 2o7s_A 22 ETSKAHELGADLVEIRLDWLKD-FNP-LEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDV---LRLAMELGADYI 96 (523)
T ss_dssp HHHHHHHHTCSEEEEEGGGCSS-CCH-HHHHHHHHHHCSSCEEEECCBGGGTSSBCSCHHHHHHH---HHHHHHHTCSEE
T ss_pred HHHHhhhcCCCEEEEEEecccc-cCh-HHHHHHHHhcCCCcEEEEecccccCCCCCCCHHHHHHH---HHHHHHhCCCEE
Confidence 3444677899999999876542 223 4567777777899999999962 467788887665433 344555677643
No 235
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=86.29 E-value=11 Score=29.70 Aligned_cols=108 Identities=18% Similarity=0.156 Sum_probs=69.4
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHH----HHHhhC-CCcEEEEEccC-CCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYR----VIKRLV-LVPVFVMIRVR-AGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~----~~~~~~-~ipv~vMIRP~-R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+.+..+.+.|||=|||.-.+-.. ++...+. .+++.. ++|+.+-+|++ -||.|..++++.-.+.+ .+.+
T Consensus 21 ~~~~~~~~~~~D~vElRvD~l~~---~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~---~~~~ 94 (238)
T 1sfl_A 21 IQKINHRIDAIDVLELRIDQFEN---VTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLIS---DLAN 94 (238)
T ss_dssp HHHHHHTTTTCSEEEEECTTSTT---CCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHHH---HGGG
T ss_pred HHHHHhhhcCCCEEEEEeccccc---CCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHHH---HHHH
Confidence 44555667799999999876542 3454443 344445 78999999972 36778888777655533 4555
Q ss_pred c-CCCEEEEeeecCCCCc--CHHHHHHHHHHhC--CCCeEEee-cccCCCC
Q psy7930 94 S-GADGFVIGALTGEQEI--DIEFIRQLKTIIG--DRPITFHR-AFDVVRE 138 (146)
Q Consensus 94 ~-GadG~VfG~L~~dg~i--D~~~~~~Li~~a~--~~~vtFHR-AFD~~~d 138 (146)
+ |+|-+=+= -.. +.+..+++++.++ +..+..+. =|+.+++
T Consensus 95 ~~~~d~iDvE-----l~~~~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~ 140 (238)
T 1sfl_A 95 INGIDMIDIE-----WQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPP 140 (238)
T ss_dssp CTTCCEEEEE-----CCTTSCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC
T ss_pred hCCCCEEEEE-----ccCCCChHHHHHHHHHHHhcCCEEEEEecCCCCCcC
Confidence 5 57766553 234 7788899998864 56655444 4677664
No 236
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=86.21 E-value=3.7 Score=34.27 Aligned_cols=66 Identities=12% Similarity=0.192 Sum_probs=44.8
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGFV 100 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~V 100 (146)
+..+++.|+|-|++-..-..++-.-...+++.+++.+++||.+ .|++ |.++.+ .+.+.| +|+|.
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~------~Ggi--t~~~a~-------~~l~~g~aD~V~ 321 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIG------AGAY--TAEKAE-------DLIGKGLIDAVA 321 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE------ESSC--CHHHHH-------HHHHTTSCSEEE
T ss_pred HHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEE------ECCc--CHHHHH-------HHHHCCCccEEE
Confidence 6778899999999975321121111467888999999999743 3556 655444 444556 99999
Q ss_pred Ee
Q psy7930 101 IG 102 (146)
Q Consensus 101 fG 102 (146)
||
T Consensus 322 ~g 323 (364)
T 1vyr_A 322 FG 323 (364)
T ss_dssp ES
T ss_pred EC
Confidence 98
No 237
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=86.06 E-value=11 Score=29.84 Aligned_cols=106 Identities=13% Similarity=-0.031 Sum_probs=66.2
Q ss_pred HHHHHHHHc-CCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCC------CCcccCHHH-----HHHHHHH
Q psy7930 20 ASALAAVRG-GADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAG------FDFVFSQAE-----KEIMALD 87 (146)
Q Consensus 20 ~~a~~A~~~-GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~------gdF~Ys~~E-----~~~M~~d 87 (146)
+.+..|.+. |.+-|||.-.. +..-....+++..+..++.+..+--+ .. |++.-.+.+ ++.+++-
T Consensus 37 e~l~~aa~~~G~~~VEl~~~~---~~~~~~~~l~~~l~~~Gl~i~~~~~~-~~~~~~~~g~l~~~d~~~r~~~i~~~~~~ 112 (333)
T 3ktc_A 37 DQINAAKEVGELSYVDLPYPF---TPGVTLSEVKDALKDAGLKAIGITPE-IYLQKWSRGAFTNPDPAARAAAFELMHES 112 (333)
T ss_dssp HHHHHHHHHSSEEEEEEEESC---STTCCHHHHHHHHHHHTCEEEEEEEC-TTSGGGTTCSTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEecCCC---cchhHHHHHHHHHHHcCCeEEEEecC-cCcccccCCCCCCcCHHHHHHHHHHHHHH
Confidence 456678888 99999996221 11335777777777788887544322 11 233323333 5789999
Q ss_pred HHHHHHcCCCEEEEeeecC----CCCcCH--------HHHHHHHHHhCCCCeEE
Q psy7930 88 CHQFVESGADGFVIGALTG----EQEIDI--------EFIRQLKTIIGDRPITF 129 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~----dg~iD~--------~~~~~Li~~a~~~~vtF 129 (146)
|+.++++|++.+|+-.=.+ .+..|. +.++++.+.|++..+++
T Consensus 113 i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~l 166 (333)
T 3ktc_A 113 AGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAI 166 (333)
T ss_dssp HHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEE
T ss_pred HHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence 9999999999999842110 122343 34666677777655554
No 238
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=86.05 E-value=0.75 Score=35.42 Aligned_cols=66 Identities=24% Similarity=0.383 Sum_probs=45.7
Q ss_pred CCCCCC--CHHHHHHHHhhC-------CCcEEEEEccCCCCCcccC-----HHHHHHHHHHHHHHHHcCCCEEEEeeecC
Q psy7930 41 EGGLTP--TLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFS-----QAEKEIMALDCHQFVESGADGFVIGALTG 106 (146)
Q Consensus 41 ~GGlTP--S~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys-----~~E~~~M~~dI~~~~~~GadG~VfG~L~~ 106 (146)
.||..| +..+++.+.+.+ .+|..++-.| ...++ |- ++=.+.+.+.++.+.+.|+|.+|+.|-|.
T Consensus 7 iGGmgp~at~~~~~~i~~~~~~~~~~~~~~~i~~~~~-~~~~~-~~~~~~~~~~~~~l~~~~~~L~~~g~d~iviaCnTa 84 (226)
T 2zsk_A 7 IGGTTPESTLYYYKKYIEISREKFEKYFYPELIIYSI-NFKEF-FQNPEGWEGRKKILINAAKALERAGAELIAFAANTP 84 (226)
T ss_dssp EECSSHHHHHHHHHHHHHHHHHHSSTTCCCCEEEEEC-CTHHH-HTCTTHHHHHHHHHHHHHHHHHHHTCSEEEESSSGG
T ss_pred ecccCHHHHHHHHHHHHHHHHHhcCCccCCeeEEeCC-CHHHH-HhhcCCcchHHHHHHHHHHHHHHcCCCEEEECCCcH
Confidence 388888 455555555432 4677777777 55555 33 33355577778888999999999999887
Q ss_pred CC
Q psy7930 107 EQ 108 (146)
Q Consensus 107 dg 108 (146)
..
T Consensus 85 ~~ 86 (226)
T 2zsk_A 85 HL 86 (226)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 239
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=86.04 E-value=1.5 Score=39.09 Aligned_cols=75 Identities=20% Similarity=0.330 Sum_probs=55.4
Q ss_pred CCCcEEEEEcc---CCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEE----eeecC--CCCcCHHHHHHHHHHhC--CCC
Q psy7930 58 VLVPVFVMIRV---RAGFDFVFSQAEKEIMALDCHQFVESGADGFVI----GALTG--EQEIDIEFIRQLKTIIG--DRP 126 (146)
Q Consensus 58 ~~ipv~vMIRP---~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~Vf----G~L~~--dg~iD~~~~~~Li~~a~--~~~ 126 (146)
..+||+||.=- ...+.| ..-+.|..+++.+|++|+|||.+ |+.-. .++.|...-++|.+.++ |++
T Consensus 10 ~~vpv~VMlPLd~V~~~~~~----~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLK 85 (495)
T 1wdp_A 10 NYVPVYVMLPLGVVNVDNVF----EDPDGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLT 85 (495)
T ss_dssp TCCCEEEECCTTSBCTTSCB----CCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCE
T ss_pred CCccEEEeeecceecCCCee----CCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCe
Confidence 47999999843 012222 24578999999999999999998 54543 57899999999999997 676
Q ss_pred eEEeecccCC
Q psy7930 127 ITFHRAFDVV 136 (146)
Q Consensus 127 vtFHRAFD~~ 136 (146)
+.-=+.|-+|
T Consensus 86 lq~vmSFHqC 95 (495)
T 1wdp_A 86 LQAIMSFHQC 95 (495)
T ss_dssp EEEEEECSCB
T ss_pred EEEEEEeeec
Confidence 6555555544
No 240
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=85.92 E-value=5.8 Score=32.92 Aligned_cols=100 Identities=18% Similarity=0.244 Sum_probs=68.0
Q ss_pred HHHHHHHHcCCCEEEecC--------CCCCCCCCCCHHHHH---HHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCA--------ALSEGGLTPTLGLYR---VIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~--------~l~~GGlTPS~g~i~---~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
+.+...+++||.-|-|=+ ++.-..+.|--..+. .+++. +++..|+-|- -. + ....++...++.
T Consensus 108 ~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARt-da--~--~~~g~~~ai~Ra 181 (305)
T 3ih1_A 108 RTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVART-DA--R--GVEGLDEAIERA 181 (305)
T ss_dssp HHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEE-CC--H--HHHCHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEee-cc--c--cccCHHHHHHHH
Confidence 345556788999887744 333334666544444 44444 7888888776 22 2 234588999999
Q ss_pred HHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEee
Q psy7930 89 HQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 89 ~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
+.+.++|||++++=.+. +.+.++++.+..+ .|+....
T Consensus 182 ~ay~eAGAD~i~~e~~~-----~~~~~~~i~~~~~-~P~~~n~ 218 (305)
T 3ih1_A 182 NAYVKAGADAIFPEALQ-----SEEEFRLFNSKVN-APLLANM 218 (305)
T ss_dssp HHHHHHTCSEEEETTCC-----SHHHHHHHHHHSC-SCBEEEC
T ss_pred HHHHHcCCCEEEEcCCC-----CHHHHHHHHHHcC-CCEEEee
Confidence 99999999999985553 6778888888764 4665544
No 241
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=85.80 E-value=0.89 Score=39.80 Aligned_cols=83 Identities=20% Similarity=0.157 Sum_probs=55.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+-+..+.+.||++|=||+ ..|++||. ..+++.+++.+++||.+---- ..| +. ..-...+.++||+
T Consensus 162 ~~a~~l~~~Gad~I~l~D--T~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hn-d~G--------lA--vAN~laAv~AGa~ 228 (464)
T 2nx9_A 162 DVAQQLAELGVDSIALKD--MAGILTPYAAEELVSTLKKQVDVELHLHCHS-TAG--------LA--DMTLLKAIEAGVD 228 (464)
T ss_dssp HHHHHHHHTTCSEEEEEE--TTSCCCHHHHHHHHHHHHHHCCSCEEEEECC-TTS--------CH--HHHHHHHHHTTCS
T ss_pred HHHHHHHHCCCCEEEEcC--CCCCcCHHHHHHHHHHHHHhcCCeEEEEECC-CCC--------hH--HHHHHHHHHhCCC
Confidence 346678889999999998 47999995 678999998888888776554 333 12 2445566778998
Q ss_pred EEEEeeecC----CCCcCHHHHH
Q psy7930 98 GFVIGALTG----EQEIDIEFIR 116 (146)
Q Consensus 98 G~VfG~L~~----dg~iD~~~~~ 116 (146)
-| =|.+++ -|+.+++.+-
T Consensus 229 ~V-D~ti~g~gertGN~~lE~lv 250 (464)
T 2nx9_A 229 RV-DTAISSMSGTYGHPATESLV 250 (464)
T ss_dssp EE-EEBCGGGCSTTSCCBHHHHH
T ss_pred EE-EEeccccCCCCcCHHHHHHH
Confidence 44 333332 3455555443
No 242
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.57 E-value=4.5 Score=32.74 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=46.5
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCC----CC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLT----PT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlT----PS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
+.+.+....+.+-+-|=+.+....-|.+ |. ..+++.+++..++||.| +|--+.. ++++...
T Consensus 160 ~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v--------GfGI~~~------e~~~~~~ 225 (267)
T 3vnd_A 160 DADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL--------GFGIAEP------EQVRAAI 225 (267)
T ss_dssp CHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE--------CSSCCSH------HHHHHHH
T ss_pred CHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE--------ECCcCCH------HHHHHHH
Confidence 3566777777777778777766433332 22 57888888888889876 2444321 3455567
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
+.||||+|+|
T Consensus 226 ~~gADgvVVG 235 (267)
T 3vnd_A 226 KAGAAGAISG 235 (267)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEC
Confidence 7899999999
No 243
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=85.46 E-value=0.47 Score=42.98 Aligned_cols=59 Identities=19% Similarity=0.226 Sum_probs=46.9
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee------ecCCCCcCHHHHHHHHHHhC--CCCeEE
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGADGFVIGA------LTGEQEIDIEFIRQLKTIIG--DRPITF 129 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~------L~~dg~iD~~~~~~Li~~a~--~~~vtF 129 (146)
|++|......-+.+++||+.+|++|.+.|-+++ -...|..|.+.+.++++.|+ |+.+.+
T Consensus 12 G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~~ld~~i~~~~~~Gi~vil 78 (675)
T 3tty_A 12 GGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFTWLDDIIERLTKENIYLCL 78 (675)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCHHHHHHHHHHHHTTCEEEE
T ss_pred eeeCChhhCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCCccCHHHHHHHHHHHHHCCCEEEE
Confidence 444433333567899999999999999999997 34568999999999999997 777654
No 244
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=85.45 E-value=3.8 Score=34.89 Aligned_cols=75 Identities=15% Similarity=0.161 Sum_probs=50.1
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCC--------CCCCCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSE--------GGLTPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~--------GGlTPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
.+.+.+++..+.+.|||-|-+-..-.. |=-.|....++++.+ ..++||.+ -|| ....
T Consensus 281 ~v~t~~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia-----~GG-i~~~------ 348 (491)
T 1zfj_A 281 NIATAEGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIA-----DGG-IKYS------ 348 (491)
T ss_dssp EECSHHHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEE-----ESC-CCSH------
T ss_pred CccCHHHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEe-----eCC-CCCH------
Confidence 456889999999999999977321000 001566677777665 35677642 244 3322
Q ss_pred HHHHHHHHHHcCCCEEEEee
Q psy7930 84 MALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG~ 103 (146)
.|+..+.++||+++++|=
T Consensus 349 --~di~kal~~GA~~v~vG~ 366 (491)
T 1zfj_A 349 --GDIVKALAAGGNAVMLGS 366 (491)
T ss_dssp --HHHHHHHHTTCSEEEEST
T ss_pred --HHHHHHHHcCCcceeeCH
Confidence 677888899999999974
No 245
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=85.42 E-value=0.93 Score=36.17 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=54.5
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC----HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+++..+.++|||.+++=- + .|...|. ...++.+++.++..+|.||.. . ..-++.+.++|
T Consensus 30 ~~i~~~~~~gad~lhvDv-m-DG~fvpn~t~G~~~v~~lr~~~~~DvhLMv~~-p--------------~~~i~~~~~aG 92 (237)
T 3cu2_A 30 EEVTTLLENQINVLHFDI-A-DGQFSSLFTVGAIGIKYFPTHCFKDVHLMVRN-Q--------------LEVAKAVVANG 92 (237)
T ss_dssp HHHHHHHHTTCCEEEEEE-E-BSSSSSCBCBCTHHHHTSCTTSEEEEEEECSC-H--------------HHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEE-e-cCccccchhhhHHHHHHHhhhCCCCeEEEEEC-H--------------HHHHHHHHHcC
Confidence 456677889999987643 2 3665554 357777777665589999887 3 34577888999
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHhCCC
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTIIGDR 125 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a~~~ 125 (146)
||++.|=+-..+ + ..++++.+++.
T Consensus 93 Ad~itvH~ea~~---~---~~~~i~~i~~~ 116 (237)
T 3cu2_A 93 ANLVTLQLEQYH---D---FALTIEWLAKQ 116 (237)
T ss_dssp CSEEEEETTCTT---S---HHHHHHHHTTC
T ss_pred CCEEEEecCCcc---c---HHHHHHHHHhc
Confidence 999877544432 2 34455555443
No 246
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=85.35 E-value=1.6 Score=38.12 Aligned_cols=94 Identities=18% Similarity=0.151 Sum_probs=63.6
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
..=|||.|.+++..|.+.||+=|=.+.. ...+++|...+...+.+.+.-.+. .|-- +| .+|+ +|++.
T Consensus 159 ~~LvEvh~~eE~~~A~~lga~iIGinnr-~L~t~~~dl~~~~~L~~~ip~~~~-vIaE--sG--I~t~-------edv~~ 225 (452)
T 1pii_A 159 GVLTEVSNEEEQERAIALGAKVVGINNR-DLRDLSIDLNRTRELAPKLGHNVT-VISE--SG--INTY-------AQVRE 225 (452)
T ss_dssp EEEEEECSHHHHHHHHHTTCSEEEEESE-ETTTTEECTHHHHHHHHHHCTTSE-EEEE--SC--CCCH-------HHHHH
T ss_pred eEEEEeCCHHHHHHHHHCCCCEEEEeCC-CCCCCCCCHHHHHHHHHhCCCCCe-EEEE--CC--CCCH-------HHHHH
Confidence 3446789999999999999998877642 346689999988888776532221 2222 44 3444 56778
Q ss_pred HHHcCCCEEEEe-eecCCCCcCHHHHHHHH
Q psy7930 91 FVESGADGFVIG-ALTGEQEIDIEFIRQLK 119 (146)
Q Consensus 91 ~~~~GadG~VfG-~L~~dg~iD~~~~~~Li 119 (146)
++++ ++||++| .|..... -..++++|+
T Consensus 226 ~~~~-a~avLVGealmr~~d-~~~~~~~l~ 253 (452)
T 1pii_A 226 LSHF-ANGFLIGSALMAHDD-LHAAVRRVL 253 (452)
T ss_dssp HTTT-CSEEEECHHHHTCSC-HHHHHHHHH
T ss_pred HHHh-CCEEEEcHHHcCCcC-HHHHHHHHH
Confidence 8899 9999999 3444332 234556665
No 247
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=85.34 E-value=9.7 Score=30.56 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=62.9
Q ss_pred CHHHHHHHH----HcCCCEEEecCCCCCCCCC-C-------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 18 SVASALAAV----RGGADRLELCAALSEGGLT-P-------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 18 s~~~a~~A~----~~GAdRIELc~~l~~GGlT-P-------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+++++..|. ..|...+-||-. ||.| | ....+...++..++| ||+=|.++++.-.= +..|
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~R---G~~~~~~y~~~~v~L~ai~~lk~~~~~p--Vi~d~sH~~g~~~~---v~~~- 212 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCER---GIRTFETATRFTLDISAVPVVKELSHLP--IIVDPSHPAGRRSL---VIPL- 212 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEEC---CBCCSCCSSSSBCCTTHHHHHHHHBSSC--EEECSSTTTCSGGG---HHHH-
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEEC---CCCCCCCcChhhcCHHHHHHHHhhhCCC--EEEEcCCCCCccch---HHHH-
Confidence 677777666 468889999863 4333 2 345677777777889 57777565442210 1111
Q ss_pred HHHHHHHHcCCCEEEEeee--------cCCCCcCHHHHHHHHHHhC
Q psy7930 86 LDCHQFVESGADGFVIGAL--------TGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L--------~~dg~iD~~~~~~Li~~a~ 123 (146)
...+..+||+|+++=.= +...+++.+.+++|++..+
T Consensus 213 --~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~ 256 (262)
T 1zco_A 213 --AKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELE 256 (262)
T ss_dssp --HHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHH
T ss_pred --HHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHH
Confidence 33467899999999753 2234799999999998765
No 248
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=85.27 E-value=0.7 Score=40.99 Aligned_cols=77 Identities=19% Similarity=0.148 Sum_probs=50.9
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC-----CHHHHHHHHhhC--CCcEEEEEccCCCCCc-
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP-----TLGLYRVIKRLV--LVPVFVMIRVRAGFDF- 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP-----S~g~i~~~~~~~--~ipv~vMIRP~R~gdF- 74 (146)
+.|..|+++|.|-|||..+- .-||--- ....++.+++.+ ++||.+=|+| - +|
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~-~--~~~ 221 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM-L--DLV 221 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEE-E--CCS
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECc-c--ccC
Confidence 67888999999999996420 1133211 155777788877 6777777777 3 22
Q ss_pred --ccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 75 --VFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 75 --~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
-++.+|.. +=++.+.+.|+|.+.++
T Consensus 222 ~~g~~~~~~~---~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 222 EDGGTFAETV---ELAQAIEAAGATIINTG 248 (671)
T ss_dssp TTCCCHHHHH---HHHHHHHHHTCSEEEEE
T ss_pred CCCCCHHHHH---HHHHHHHhcCCCEEEcC
Confidence 24555443 44667788999999875
No 249
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=85.24 E-value=4.6 Score=33.23 Aligned_cols=67 Identities=22% Similarity=0.271 Sum_probs=47.8
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
++.+.+.+++|||=|=+= |+ |+...++++.+.+++|+.+-+-. -+..-.++. +.+.++|++.
T Consensus 170 i~ra~ay~eAGAd~i~~e------~~-~~~~~~~~i~~~~~iP~~~N~~~-~g~~p~~~~----------~eL~~~G~~~ 231 (295)
T 1xg4_A 170 IERAQAYVEAGAEMLFPE------AI-TELAMYRQFADAVQVPILANITE-FGATPLFTT----------DELRSAHVAM 231 (295)
T ss_dssp HHHHHHHHHTTCSEEEET------TC-CSHHHHHHHHHHHCSCBEEECCS-SSSSCCCCH----------HHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEe------CC-CCHHHHHHHHHHcCCCEEEEecc-cCCCCCCCH----------HHHHHcCCCE
Confidence 467888999999987652 33 89999999999999998543322 111223343 5677889999
Q ss_pred EEEee
Q psy7930 99 FVIGA 103 (146)
Q Consensus 99 ~VfG~ 103 (146)
+.+|.
T Consensus 232 v~~~~ 236 (295)
T 1xg4_A 232 ALYPL 236 (295)
T ss_dssp EEESS
T ss_pred EEECh
Confidence 99985
No 250
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=85.18 E-value=3 Score=35.11 Aligned_cols=79 Identities=15% Similarity=0.090 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC------CHHHHHHHHhhCCC-cEEEEEccCCCCCcc
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP------TLGLYRVIKRLVLV-PVFVMIRVRAGFDFV 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP------S~g~i~~~~~~~~i-pv~vMIRP~R~gdF~ 75 (146)
+.|..|.++|.|-|||..+- .-||- . ...+++.+++.++- ||.|=|+| .++.
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~avg~~~V~vrls~---~~~~ 246 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGS-LENRCRFALEIVEAVANEIGSDRVGIRISP---FAHY 246 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECT---TCCT
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCcc-HHHhHHHHHHHHHHHHHHhcCCceEEEecc---cccc
Confidence 56788999999999997531 11332 1 24567777777743 77665555 3331
Q ss_pred ---cCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 76 ---FSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 76 ---Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
-.....+...+=++.+.+.|+|.+.+-
T Consensus 247 ~g~~~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 247 NEAGDTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp TTCCCSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 012234445556778888999998773
No 251
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=85.14 E-value=4 Score=33.77 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=44.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCC---CCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGG---LTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GG---lTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+=+...++.|+|-|++-+.-...- ..| ...+++.+++.+++||.+ .|++ +|.++ ++.+.+.
T Consensus 233 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~------~GgI-~s~e~-------a~~~L~~ 298 (340)
T 3gr7_A 233 PYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGA------VGLI-TSGWQ-------AEEILQN 298 (340)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEE------ESSC-CCHHH-------HHHHHHT
T ss_pred HHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEe------eCCC-CCHHH-------HHHHHHC
Confidence 346667788999999964211110 012 467888999999999754 2333 34443 4455567
Q ss_pred C-CCEEEEe
Q psy7930 95 G-ADGFVIG 102 (146)
Q Consensus 95 G-adG~VfG 102 (146)
| +|.|.||
T Consensus 299 G~aD~V~iG 307 (340)
T 3gr7_A 299 GRADLVFLG 307 (340)
T ss_dssp TSCSEEEEC
T ss_pred CCeeEEEec
Confidence 7 9999999
No 252
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=85.12 E-value=10 Score=31.21 Aligned_cols=101 Identities=16% Similarity=0.226 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCEEEecCCC--------CCCCCCCCHHHHHHHHh---hC-CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAAL--------SEGGLTPTLGLYRVIKR---LV-LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l--------~~GGlTPS~g~i~~~~~---~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+.+...+++||.=|-|-+.. .-..|+|--..+..++. .. +.+..|+-|- ..+. ...++...++
T Consensus 98 ~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRt---da~~--~~gl~~ai~r 172 (295)
T 1xg4_A 98 RTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMART---DALA--VEGLDAAIER 172 (295)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE---CCHH--HHCHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEec---HHhh--hcCHHHHHHH
Confidence 34555677899998886543 22238887666555443 32 5677777776 2222 4457889999
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEee
Q psy7930 88 CHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
.+.+.++|||++++=.++ |.+..+++.+..+ .|+.+..
T Consensus 173 a~ay~eAGAd~i~~e~~~-----~~~~~~~i~~~~~-iP~~~N~ 210 (295)
T 1xg4_A 173 AQAYVEAGAEMLFPEAIT-----ELAMYRQFADAVQ-VPILANI 210 (295)
T ss_dssp HHHHHHTTCSEEEETTCC-----SHHHHHHHHHHHC-SCBEEEC
T ss_pred HHHHHHcCCCEEEEeCCC-----CHHHHHHHHHHcC-CCEEEEe
Confidence 999999999999985543 7788888888775 5655444
No 253
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=85.11 E-value=3.6 Score=34.21 Aligned_cols=65 Identities=20% Similarity=0.128 Sum_probs=44.5
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+.+++..|.+=+=|-. ++......+++++++.+ ++||.+- || .-|. +|++.+.++|||+|
T Consensus 192 a~~gad~G~~lV~LD~----~~~~v~~e~V~~I~~~~~~~iPV~vG-----GG--Irs~-------Eda~~ll~aGAD~V 253 (286)
T 3vk5_A 192 LHVARAFGFHMVYLYS----RNEHVPPEVVRHFRKGLGPDQVLFVS-----GN--VRSG-------RQVTEYLDSGADYV 253 (286)
T ss_dssp HHHHHHTTCSEEEEEC----SSSCCCHHHHHHHHHHSCTTCEEEEE-----SS--CCSH-------HHHHHHHHTTCSEE
T ss_pred HHHHHHcCCCEEEEcC----CCCcCCHHHHHHHHHhcCCCCCEEEE-----eC--CCCH-------HHHHHHHHcCCCEE
Confidence 3444556666665553 34444679999999999 8998763 22 2222 56777888999999
Q ss_pred EEeee
Q psy7930 100 VIGAL 104 (146)
Q Consensus 100 VfG~L 104 (146)
|+|=.
T Consensus 254 VVGSA 258 (286)
T 3vk5_A 254 GFAGA 258 (286)
T ss_dssp EESGG
T ss_pred EECch
Confidence 99953
No 254
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=85.00 E-value=3.5 Score=36.63 Aligned_cols=100 Identities=8% Similarity=0.023 Sum_probs=62.4
Q ss_pred cceeEEEecCHHHHHHHHHcC---CCEEEecCCCCC---CCCC-CC--HHHHHHHHhh------CCCcEEEEEccCCCCC
Q psy7930 9 KTTLEVCVDSVASALAAVRGG---ADRLELCAALSE---GGLT-PT--LGLYRVIKRL------VLVPVFVMIRVRAGFD 73 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~G---AdRIELc~~l~~---GGlT-PS--~g~i~~~~~~------~~ipv~vMIRP~R~gd 73 (146)
..++=+-+.|++++..|.+.| ||-|=+-.-... -+.. |. ...++++++. .++||+++ ||=
T Consensus 108 ~~iiG~S~ht~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAI-----GGI 182 (540)
T 3nl6_A 108 DMVIGWSVGFPEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGI-----GGL 182 (540)
T ss_dssp TSEEEEEECSHHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEE-----SSC
T ss_pred CCEEEEECCCHHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEE-----cCC
Confidence 457888999999999999999 999988332211 1221 22 4456666654 47898775 331
Q ss_pred cccCHHHHHHHHHHHHHHHH--------cCCCEEEEe-eecCCCCcCHHHHHHHHHHhCC
Q psy7930 74 FVFSQAEKEIMALDCHQFVE--------SGADGFVIG-ALTGEQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 74 F~Ys~~E~~~M~~dI~~~~~--------~GadG~VfG-~L~~dg~iD~~~~~~Li~~a~~ 124 (146)
+. +++..+.+ .|+|||+++ ++..... -..+.++|.+....
T Consensus 183 ---~~-------~ni~~v~~~~~~~g~~~GadgvAVvsaI~~a~d-p~~a~~~l~~~~~~ 231 (540)
T 3nl6_A 183 ---HP-------DNIERVLYQCVSSNGKRSLDGICVVSDIIASLD-AAKSTKILRGLIDK 231 (540)
T ss_dssp ---CT-------TTHHHHHHHCBCTTSSCBCSCEEESHHHHTCTT-HHHHHHHHHHHHHC
T ss_pred ---CH-------HHHHHHHHhhcccccccCceEEEEeHHHhcCCC-HHHHHHHHHHHHHh
Confidence 11 34566665 799999876 4543322 24456677666554
No 255
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=84.92 E-value=2.5 Score=32.72 Aligned_cols=79 Identities=19% Similarity=0.268 Sum_probs=44.9
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEecCCCCC-CC---CCCCH----HHHHHHHhhC-CCcEEEEEccCCCCCcccCHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLELCAALSE-GG---LTPTL----GLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~-GG---lTPS~----g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
+..=+|+.+.++...+.+.|++-|=....-.. -| .|++. ...+.+++.. ++||.+ +|+-. ++
T Consensus 112 l~~iv~v~~~~e~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~~~ii~------ggGI~-~~-- 182 (219)
T 2h6r_A 112 LETIVCTNNINTSKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKDVKVLC------GAGIS-KG-- 182 (219)
T ss_dssp CEEEEEESSSHHHHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTTCEEEE------CSSCC-SH--
T ss_pred CeEEEEeCCchHHHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCCCeEEE------EeCcC-cH--
Confidence 34456888888888888889887777663322 24 44433 2334444433 455432 33222 22
Q ss_pred HHHHHHHHHHHHHcCCCEEEEe
Q psy7930 81 KEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG 102 (146)
++++.+++.|+|||++|
T Consensus 183 -----~~~~~~~~~gaDgvlVG 199 (219)
T 2h6r_A 183 -----EDVKAALDLGAEGVLLA 199 (219)
T ss_dssp -----HHHHHHHTTTCCCEEES
T ss_pred -----HHHHHHhhCCCCEEEEc
Confidence 46667889999999999
No 256
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=84.91 E-value=11 Score=33.04 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=41.2
Q ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeee---c-CCCCcCHHHHHHHHHHh
Q psy7930 47 TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGAL---T-GEQEIDIEFIRQLKTII 122 (146)
Q Consensus 47 S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L---~-~dg~iD~~~~~~Li~~a 122 (146)
+...++.+++..++||.|=.-+ + .+|.+.+.++|+|+|+++-- . +.+.-+.+.+.++.++.
T Consensus 331 ~~~~i~~lr~~~~~PvivKgv~--------~-------~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v 395 (511)
T 1kbi_A 331 TWKDIEELKKKTKLPIVIKGVQ--------R-------TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPIL 395 (511)
T ss_dssp CHHHHHHHHHHCSSCEEEEEEC--------S-------HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEEeCC--------C-------HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHH
Confidence 4778899999889998653212 1 36688899999999999421 0 11223466777777766
No 257
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.81 E-value=1.9 Score=34.52 Aligned_cols=87 Identities=11% Similarity=0.124 Sum_probs=58.9
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+.|++++.+|.+.|||-|-+=- .+..+....++.++..+ ++|+ | | -|| - |. +.+..+.++
T Consensus 134 v~TptEi~~A~~~Gad~vK~FP----a~~~gG~~~lkal~~p~p~ip~--~--p-tGG-I--~~-------~n~~~~l~a 194 (232)
T 4e38_A 134 VNNPSTVEAALEMGLTTLKFFP----AEASGGISMVKSLVGPYGDIRL--M--P-TGG-I--TP-------SNIDNYLAI 194 (232)
T ss_dssp ECSHHHHHHHHHTTCCEEEECS----TTTTTHHHHHHHHHTTCTTCEE--E--E-BSS-C--CT-------TTHHHHHTS
T ss_pred CCCHHHHHHHHHcCCCEEEECc----CccccCHHHHHHHHHHhcCCCe--e--e-EcC-C--CH-------HHHHHHHHC
Confidence 4599999999999999998732 22223457888887765 4554 3 7 677 2 22 467888999
Q ss_pred CCCEEEEee-ecCCC---CcCHHHHHHHHHH
Q psy7930 95 GADGFVIGA-LTGEQ---EIDIEFIRQLKTI 121 (146)
Q Consensus 95 GadG~VfG~-L~~dg---~iD~~~~~~Li~~ 121 (146)
|+.++|.|- |++.. .=|.+.++++.+.
T Consensus 195 Ga~~~vgGs~l~~~~~i~~~~~~~i~~~a~~ 225 (232)
T 4e38_A 195 PQVLACGGTWMVDKKLVTNGEWDEIARLTRE 225 (232)
T ss_dssp TTBCCEEECGGGCHHHHHTTCHHHHHHHHHH
T ss_pred CCeEEEECchhcChHHhhcCCHHHHHHHHHH
Confidence 999999985 55421 1256666655443
No 258
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=84.78 E-value=9.6 Score=33.10 Aligned_cols=114 Identities=15% Similarity=0.001 Sum_probs=74.4
Q ss_pred eeEEEecCHHHHHHHHHcCCC-----EEEecCCC-C-CCCCCCC-----HHHHHHHHhhCCCcE--EEEEccCCCCCccc
Q psy7930 11 TLEVCVDSVASALAAVRGGAD-----RLELCAAL-S-EGGLTPT-----LGLYRVIKRLVLVPV--FVMIRVRAGFDFVF 76 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAd-----RIELc~~l-~-~GGlTPS-----~g~i~~~~~~~~ipv--~vMIRP~R~gdF~Y 76 (146)
+.=+|+.|++.+.++.++... =||...+- . .||.|+- ..+++.+.+..++|+ .++=.= ++|+|.+
T Consensus 16 v~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlD-Hg~~~~w 94 (420)
T 2fiq_A 16 ICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGD-HLGPNCW 94 (420)
T ss_dssp EEEECCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEE-EESSGGG
T ss_pred EEEeccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECC-CCCCccc
Confidence 456888999888887766432 35655432 2 3788852 344444555678994 444444 6999966
Q ss_pred ----CHHHHHHHHHHHHHHHHcCCCEEEEeeec----CCCCcCH----HHHHHHHHHhCCC
Q psy7930 77 ----SQAEKEIMALDCHQFVESGADGFVIGALT----GEQEIDI----EFIRQLKTIIGDR 125 (146)
Q Consensus 77 ----s~~E~~~M~~dI~~~~~~GadG~VfG~L~----~dg~iD~----~~~~~Li~~a~~~ 125 (146)
.+++++.-++.|..+.++|-..|-|=+=. ++-.++. .++++|++.|+..
T Consensus 95 ~~~~~~~am~~a~e~i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~ 155 (420)
T 2fiq_A 95 QQENVDAAMEKSVELVKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESV 155 (420)
T ss_dssp TTSBHHHHHHHHHHHHHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhhhhHHHHHHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence 46667777799999999999999885543 1111333 3378899988754
No 259
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=84.76 E-value=19 Score=32.08 Aligned_cols=99 Identities=14% Similarity=0.078 Sum_probs=65.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHh---hCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKR---LVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~---~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
-.++..|.++|++.|-+...++. . .-++.+.+ ..+..+.+-|-+ ..+..|+.+.+..+. +.+.++|
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd-----~-~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~a---~~l~~~G 188 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMND-----P-RNMAHAMAAVKKAGKHAQGTICY--TISPVHTVEGYVKLA---GQLLDMG 188 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCC-----T-HHHHHHHHHHHHTTCEEEEEEEC--CCSTTCCHHHHHHHH---HHHHHTT
T ss_pred HHHHHHHHhCCCCEEEEEEehhH-----H-HHHHHHHHHHHHCCCeEEEEEEe--eeCCCCCHHHHHHHH---HHHHHcC
Confidence 34578899999999999865433 2 22333322 246677667766 445778766655554 5566789
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHh----C-CCCeEEe
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTII----G-DRPITFH 130 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a----~-~~~vtFH 130 (146)
++-|.+. +--|-.......+|+++. . +.++-||
T Consensus 189 ad~I~L~--DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H 226 (539)
T 1rqb_A 189 ADSIALK--DMAALLKPQPAYDIIKAIKDTYGQKTQINLH 226 (539)
T ss_dssp CSEEEEE--ETTCCCCHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred CCEEEeC--CCCCCcCHHHHHHHHHHHHHhcCCCceEEEE
Confidence 9977664 556667777777776654 3 5788888
No 260
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=84.76 E-value=15 Score=30.22 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEecCC--------CCCCCCCCCHHHHHHHH---hhC-CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAA--------LSEGGLTPTLGLYRVIK---RLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~--------l~~GGlTPS~g~i~~~~---~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+.+...++.||.-|-|=+. +.-..+.|.-..+..++ +.. +.+..++-|- -.| ....++.-.+.
T Consensus 102 ~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ART---Da~--~~~gldeai~R 176 (298)
T 3eoo_A 102 RTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMART---DAA--AAEGIDAAIER 176 (298)
T ss_dssp HHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE---CTH--HHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEee---hhh--hhcCHHHHHHH
Confidence 3455567789998877553 33334777765555554 332 5678888776 223 34568888888
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEee
Q psy7930 88 CHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
.+.+.++|||++.+=.++ |.+.++++.+..+ .|+....
T Consensus 177 a~ay~~AGAD~if~~~~~-----~~ee~~~~~~~~~-~Pl~~n~ 214 (298)
T 3eoo_A 177 AIAYVEAGADMIFPEAMK-----TLDDYRRFKEAVK-VPILANL 214 (298)
T ss_dssp HHHHHHTTCSEEEECCCC-----SHHHHHHHHHHHC-SCBEEEC
T ss_pred HHhhHhcCCCEEEeCCCC-----CHHHHHHHHHHcC-CCeEEEe
Confidence 999999999999886553 7888999998875 6664443
No 261
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=84.70 E-value=3.7 Score=34.54 Aligned_cols=79 Identities=16% Similarity=0.077 Sum_probs=48.4
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCCC------HHHHHHHHhhCCC-cEEEEEccCCCCCcc
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTPT------LGLYRVIKRLVLV-PVFVMIRVRAGFDFV 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTPS------~g~i~~~~~~~~i-pv~vMIRP~R~gdF~ 75 (146)
+.|..|.++|.|-|||..+- .-|| +.- ..+++.+++.++- ||-|=|+| .++.
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGG-slenR~rf~~eiv~aVr~~vg~~~v~vRls~---~~~~ 232 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGG-SLENRARLLLEVTDAAIEVWGAQRVGVHLAP---RADA 232 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGGGEEEEECT---TCCS
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCC-chhhHHHHHHHHHHHHHHhcCCCceEEEeec---cccc
Confidence 56788999999999998641 1144 221 3477777777643 76555555 3321
Q ss_pred --c-CHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 76 --F-SQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 76 --Y-s~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
. ..+..+...+=++.+.++|+|-+-+-
T Consensus 233 ~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~ 262 (362)
T 4ab4_A 233 HDMGDADRAETFTYVARELGKRGIAFICSR 262 (362)
T ss_dssp SSCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred cccCCCCcHHHHHHHHHHHHHhCCCEEEEC
Confidence 0 11223444555677788999988653
No 262
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=84.65 E-value=5.7 Score=31.66 Aligned_cols=89 Identities=18% Similarity=0.048 Sum_probs=59.1
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
+-+.+++.+..|...|+|-|=|- ++. +. +....+....... .-+..++||. -+++ ..||+.+.
T Consensus 24 ~~~~~p~~~e~a~~~GaD~v~lD--lE~-~~-~~~~~~~~~~~a~~~~~~~~~VRv-~~~~-----------~~~i~~~l 87 (267)
T 2vws_A 24 LSSTTAYMAEIAATSGYDWLLID--GEH-AP-NTIQDLYHQLQAVAPYASQPVIRP-VEGS-----------KPLIKQVL 87 (267)
T ss_dssp ECSCCHHHHHHHHTTCCSEEEEE--TTT-SC-CCHHHHHHHHHHHTTSSSEEEEEC-SSCC-----------HHHHHHHH
T ss_pred EeCCCHHHHHHHHhCCCCEEEEc--CCC-CC-CCHHHHHHHHHHHHhCCCcEEEEe-CCCC-----------HHHHHHHH
Confidence 34569999999999999987664 333 33 2344444444332 2366789998 5554 25778888
Q ss_pred HcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 93 ESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 93 ~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+.|++||++=..+. .+..+++++.++
T Consensus 88 ~~g~~~I~~P~V~s-----~ee~~~~~~~~~ 113 (267)
T 2vws_A 88 DIGAQTLLIPMVDT-----AEQARQVVSATR 113 (267)
T ss_dssp HTTCCEEEECCCCS-----HHHHHHHHHHTS
T ss_pred HhCCCEEEeCCCCC-----HHHHHHHHHHHc
Confidence 99999998866542 334667777764
No 263
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.48 E-value=12 Score=31.12 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=69.6
Q ss_pred HHHHHHHHcCCCEEEecCCC--------CCCCCCCCHHHHHHHH---hh---CCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAAL--------SEGGLTPTLGLYRVIK---RL---VLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l--------~~GGlTPS~g~i~~~~---~~---~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.+...++.||.-|-|=+.. .-..+.|.-..+..++ +. .+.+..++-|- . .|. ...++.-.
T Consensus 107 ~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ART--D-a~~--~~gldeAi 181 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIART--D-ALQ--SLGYEECI 181 (307)
T ss_dssp HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE--C-CHH--HHCHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEec--h-hhh--ccCHHHHH
Confidence 34556678899998876543 2223667655555443 32 36788888887 2 232 34578888
Q ss_pred HHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEee
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
+..+.+.++|||++.+=.+ -|.+.++++.+...+.|+....
T Consensus 182 ~Ra~ay~eAGAD~ifi~~~-----~~~~~~~~i~~~~~~~Pv~~n~ 222 (307)
T 3lye_A 182 ERLRAARDEGADVGLLEGF-----RSKEQAAAAVAALAPWPLLLNS 222 (307)
T ss_dssp HHHHHHHHTTCSEEEECCC-----SCHHHHHHHHHHHTTSCBEEEE
T ss_pred HHHHHHHHCCCCEEEecCC-----CCHHHHHHHHHHccCCceeEEe
Confidence 8899999999999987544 4778899999988777775543
No 264
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=84.36 E-value=0.96 Score=38.18 Aligned_cols=81 Identities=12% Similarity=-0.035 Sum_probs=52.0
Q ss_pred eeEEEecCHHHHH----HHH---HcCCCEEEecC---CCCCCCC----CC--CHHHHHHHHhhCCCcEEEEEccCCCCCc
Q psy7930 11 TLEVCVDSVASAL----AAV---RGGADRLELCA---ALSEGGL----TP--TLGLYRVIKRLVLVPVFVMIRVRAGFDF 74 (146)
Q Consensus 11 ~lEvcv~s~~~a~----~A~---~~GAdRIELc~---~l~~GGl----TP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF 74 (146)
++-++..|+++-. .++ +.|+|-|||+- +. .||- .| -..+++.+++..++||.|=||| - +
T Consensus 130 ivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~-~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p-~---~ 204 (354)
T 4ef8_A 130 FLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNV-PGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP-Y---F 204 (354)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS-TTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC-C---C
T ss_pred EEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC-CCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC-C---C
Confidence 4556666666533 333 46899999984 22 2432 12 1346677777789999999999 2 2
Q ss_pred ccCHHHHHHHHHHHHHHHHcC-CCEEEE
Q psy7930 75 VFSQAEKEIMALDCHQFVESG-ADGFVI 101 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~G-adG~Vf 101 (146)
+..|+.. =++.+.+.| +|||+.
T Consensus 205 --d~~~~~~---~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 205 --DFAHFDA---AAEILNEFPKVQFITC 227 (354)
T ss_dssp --SHHHHHH---HHHHHHTCTTEEEEEE
T ss_pred --CHHHHHH---HHHHHHhCCCccEEEE
Confidence 4555533 345566888 999985
No 265
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=84.21 E-value=2.5 Score=35.84 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=49.3
Q ss_pred CHHHHHHH-HHcCCCEEEecCCCC-----CCCCCCCH----HHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 18 SVASALAA-VRGGADRLELCAALS-----EGGLTPTL----GLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 18 s~~~a~~A-~~~GAdRIELc~~l~-----~GGlTPS~----g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+.+++..+ ...|||-+++--+.. ..| .+++ ..++.+++..++||.|=. . + |-.+. ++
T Consensus 156 ~~e~~~~~ve~~~adal~ihln~~qe~~~p~G-d~~~~~~~~~I~~l~~~~~~PVivK~-v--g--~g~s~-------e~ 222 (365)
T 3sr7_A 156 PYQAGLQAVRDLQPLFLQVHINLMQELLMPEG-EREFRSWKKHLSDYAKKLQLPFILKE-V--G--FGMDV-------KT 222 (365)
T ss_dssp CHHHHHHHHHHHCCSCEEEEECHHHHHTSSSS-CCCCHHHHHHHHHHHHHCCSCEEEEE-C--S--SCCCH-------HH
T ss_pred CHHHHHHHHHhcCCCEEEEeccccccccCCCC-CCcHHHHHHHHHHHHHhhCCCEEEEE-C--C--CCCCH-------HH
Confidence 45555554 478999999887642 122 2334 678888888899986653 3 1 33444 46
Q ss_pred HHHHHHcCCCEEEEe
Q psy7930 88 CHQFVESGADGFVIG 102 (146)
Q Consensus 88 I~~~~~~GadG~VfG 102 (146)
++.+.++|+|+|+++
T Consensus 223 A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 223 IQTAIDLGVKTVDIS 237 (365)
T ss_dssp HHHHHHHTCCEEECC
T ss_pred HHHHHHcCCCEEEEe
Confidence 788889999999984
No 266
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=84.20 E-value=7.3 Score=31.84 Aligned_cols=86 Identities=15% Similarity=0.258 Sum_probs=58.3
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEE--ccCCC----CCccc---CHHHHHHHHHHHHHHHH
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMI--RVRAG----FDFVF---SQAEKEIMALDCHQFVE 93 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMI--RP~R~----gdF~Y---s~~E~~~M~~dI~~~~~ 93 (146)
....++||+=|-|= || .--...++.+.+ .+|||+--| -| +. |+|.- ++++.+.+.+|.+.+.+
T Consensus 101 ~rl~kaGa~aVklE-----gg-~e~~~~I~al~~-agipV~gHiGLtP-q~v~~~ggf~v~grt~~~a~~~i~rA~a~~e 172 (264)
T 1m3u_A 101 ATVMRAGANMVKIE-----GG-EWLVETVQMLTE-RAVPVCGHLGLTP-QSVNIFGGYKVQGRGDEAGDQLLSDALALEA 172 (264)
T ss_dssp HHHHHTTCSEEECC-----CS-GGGHHHHHHHHH-TTCCEEEEEESCG-GGHHHHTSSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEC-----Cc-HHHHHHHHHHHH-CCCCeEeeecCCc-eeecccCCeEEEeCCHHHHHHHHHHHHHHHH
Confidence 35667899988764 44 233555665544 479985444 46 32 45643 67788999999999999
Q ss_pred cCCCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 94 SGADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 94 ~GadG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
+||+++|+=++.+ +..+++.+..
T Consensus 173 AGA~~ivlE~vp~------~~a~~it~~l 195 (264)
T 1m3u_A 173 AGAQLLVLECVPV------ELAKRITEAL 195 (264)
T ss_dssp HTCCEEEEESCCH------HHHHHHHHHC
T ss_pred CCCcEEEEecCCH------HHHHHHHHhC
Confidence 9999999977542 3445555544
No 267
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=84.18 E-value=1.4 Score=39.31 Aligned_cols=75 Identities=23% Similarity=0.360 Sum_probs=55.1
Q ss_pred CCCcEEEEEcc---CCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEE----eeecC--CCCcCHHHHHHHHHHhC--CCC
Q psy7930 58 VLVPVFVMIRV---RAGFDFVFSQAEKEIMALDCHQFVESGADGFVI----GALTG--EQEIDIEFIRQLKTIIG--DRP 126 (146)
Q Consensus 58 ~~ipv~vMIRP---~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~Vf----G~L~~--dg~iD~~~~~~Li~~a~--~~~ 126 (146)
..+||+||.=- ...+.| ..-+.|..+++.+|++|+|||.+ |+.-. .++.|...-++|.+.++ |++
T Consensus 11 ~~vpv~VMlPLd~V~~~~~~----~~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mv~~~GLK 86 (498)
T 1fa2_A 11 NYVSLYVMLPLGVVNADNVF----PDKEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLK 86 (498)
T ss_dssp GCCEEEEECCTTSSCSSSCC----CCHHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHHHHHHHHHHHHTTCE
T ss_pred CCceEEEEeecceecCCCee----CCHHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCe
Confidence 36899999843 012222 24578899999999999999998 44543 57899999999999997 676
Q ss_pred eEEeecccCC
Q psy7930 127 ITFHRAFDVV 136 (146)
Q Consensus 127 vtFHRAFD~~ 136 (146)
+.-=+.|-+|
T Consensus 87 lq~vmSFHqC 96 (498)
T 1fa2_A 87 IQAIMSFHQC 96 (498)
T ss_dssp EEEEEECSCB
T ss_pred EEEEEEeeec
Confidence 6545555544
No 268
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=84.00 E-value=8.5 Score=32.61 Aligned_cols=66 Identities=14% Similarity=0.275 Sum_probs=43.6
Q ss_pred CHHHHHHHHhhCCCcEEE-EEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee----ecCCCCcCHHHHHHHHHH
Q psy7930 47 TLGLYRVIKRLVLVPVFV-MIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA----LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 47 S~g~i~~~~~~~~ipv~v-MIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~----L~~dg~iD~~~~~~Li~~ 121 (146)
+...++.+++..++||.| .+ .+ .+|.+.+.++|+|+|+++- -...|.-+.+.+.++.++
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv---------~~-------~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~a 303 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGI---------LR-------GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEA 303 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEE---------CC-------HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEec---------CC-------HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHH
Confidence 567788888888899876 22 22 2468899999999999931 112244567788888877
Q ss_pred hC-CCCeE
Q psy7930 122 IG-DRPIT 128 (146)
Q Consensus 122 a~-~~~vt 128 (146)
.+ .+|+.
T Consensus 304 v~~~ipVi 311 (392)
T 2nzl_A 304 VEGKVEVF 311 (392)
T ss_dssp HTTSSEEE
T ss_pred cCCCCEEE
Confidence 65 35554
No 269
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=83.93 E-value=1.9 Score=36.34 Aligned_cols=66 Identities=20% Similarity=0.172 Sum_probs=41.5
Q ss_pred HcCCCEEEecC-CCCCCCCC----CC--HHHHHHHHhh-------CCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 27 RGGADRLELCA-ALSEGGLT----PT--LGLYRVIKRL-------VLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 27 ~~GAdRIELc~-~l~~GGlT----PS--~g~i~~~~~~-------~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
..+||-|||+- ....-|+- |. ..+++.+++. .++||.|=||| - .++++ +.+-++.+.
T Consensus 174 ~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p-~-----~~~~~---~~~ia~~~~ 244 (367)
T 3zwt_A 174 GPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAP-D-----LTSQD---KEDIASVVK 244 (367)
T ss_dssp GGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECS-C-----CCHHH---HHHHHHHHH
T ss_pred hhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCC-C-----CCHHH---HHHHHHHHH
Confidence 34699999973 22222321 21 2345555442 57999999999 2 34444 445567778
Q ss_pred HcCCCEEEE
Q psy7930 93 ESGADGFVI 101 (146)
Q Consensus 93 ~~GadG~Vf 101 (146)
++|+|||++
T Consensus 245 ~aGadgi~v 253 (367)
T 3zwt_A 245 ELGIDGLIV 253 (367)
T ss_dssp HHTCCEEEE
T ss_pred HcCCCEEEE
Confidence 999999986
No 270
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=83.52 E-value=15 Score=29.25 Aligned_cols=71 Identities=17% Similarity=0.227 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC----CHHHHHHHHhhC-CCc--EEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP----TLGLYRVIKRLV-LVP--VFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP----S~g~i~~~~~~~-~ip--v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
+++....++|||.+.+=- -.|...| ...+++++++.. ++| ++.||.. .+ +=++.+.
T Consensus 44 ~~i~~l~~~G~d~lHvDV--mDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~--p~-------------~~i~~~~ 106 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDV--MDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKP--VD-------------ALIESFA 106 (246)
T ss_dssp HHHHHHHHTTCCCEEEEE--EBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSS--CH-------------HHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEe--cCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCC--HH-------------HHHHHHH
Confidence 556667789999887731 1244434 567899999887 666 6667664 21 2356678
Q ss_pred HcCCCEEEEeeecCC
Q psy7930 93 ESGADGFVIGALTGE 107 (146)
Q Consensus 93 ~~GadG~VfG~L~~d 107 (146)
++|||.+.|..-..+
T Consensus 107 ~aGAd~itvH~Ea~~ 121 (246)
T 3inp_A 107 KAGATSIVFHPEASE 121 (246)
T ss_dssp HHTCSEEEECGGGCS
T ss_pred HcCCCEEEEccccch
Confidence 899999999876543
No 271
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=83.27 E-value=6.6 Score=30.88 Aligned_cols=71 Identities=18% Similarity=0.157 Sum_probs=47.3
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCC----CCCCHHHHHHHHhhCCC--cEEEEEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGG----LTPTLGLYRVIKRLVLV--PVFVMIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GG----lTPS~g~i~~~~~~~~i--pv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
++++.....++|||.+++=- --|. +|=...+++.+++.++. .+|.||-. .+ +-++.+
T Consensus 14 ~l~~~i~~~~~gad~lHvDv--mDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~d--p~-------------~~i~~~ 76 (231)
T 3ctl_A 14 KFKEQIEFIDSHADYFHIDI--MDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTR--PQ-------------DYIAQL 76 (231)
T ss_dssp GHHHHHHHHHTTCSCEEEEE--ECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSC--GG-------------GTHHHH
T ss_pred hHHHHHHHHHcCCCEEEEEE--EeCccCccchhcHHHHHHHHhccCCcEEEEEEecC--HH-------------HHHHHH
Confidence 34444444499999987642 1355 44457799999987654 58888875 22 124667
Q ss_pred HHcCCCEEEEeeec
Q psy7930 92 VESGADGFVIGALT 105 (146)
Q Consensus 92 ~~~GadG~VfG~L~ 105 (146)
.++|||++.|-+=.
T Consensus 77 ~~aGAd~itvh~Ea 90 (231)
T 3ctl_A 77 ARAGADFITLHPET 90 (231)
T ss_dssp HHHTCSEEEECGGG
T ss_pred HHcCCCEEEECccc
Confidence 78899998887543
No 272
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=83.26 E-value=5.4 Score=31.97 Aligned_cols=84 Identities=18% Similarity=0.088 Sum_probs=56.3
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHH-HHhhCCCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPT-LGLYRV-IKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~-~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
+..|=+-..+.+-+..|.. |||-|=|+- +.|..|+ ....+. +++...-+..++||+ ++-+-- ....
T Consensus 8 rs~L~vP~~~~~~~~ka~~-gaD~vilDl---EDav~~~~k~~Ar~~l~~~~~~~~~~~VRV-n~~~~~-------~~~~ 75 (273)
T 1u5h_A 8 PGWLFCPADAPEAFAAAAA-AADVVILDL---EDGVAEAQKPAARNALRDTPLDPERTVVRI-NAGGTA-------DQAR 75 (273)
T ss_dssp SEEEEEETTCGGGHHHHHH-HCSEEEEES---STTSCGGGHHHHHHHHHHSCCCTTSEEEEC-CCTTCH-------HHHH
T ss_pred CeEEEeeCCCHHHHHHHHh-CCCEEEEEC---CCCCCcCCHHHHHHHHHhcCcCCCeEEEEE-CCCCch-------HHHH
Confidence 3456677778888888888 999999994 4777776 232222 222222245678898 665432 3567
Q ss_pred HHHHHHHcCCCEEEEeee
Q psy7930 87 DCHQFVESGADGFVIGAL 104 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L 104 (146)
|++.+...|++||++=-.
T Consensus 76 dl~~~~~~g~~gi~lPKv 93 (273)
T 1u5h_A 76 DLEALAGTAYTTVMLPKA 93 (273)
T ss_dssp HHHHHHTSCCCEEEETTC
T ss_pred HHHHHHhcCCCEEEeCCC
Confidence 888888899999987533
No 273
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=83.23 E-value=4.3 Score=33.89 Aligned_cols=66 Identities=12% Similarity=0.113 Sum_probs=44.7
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGFV 100 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~V 100 (146)
+..+++.|+|-|++-.....++-.-...+++.+++.+++||.+ .|++ |.++ +..+.+.| ||+|.
T Consensus 256 a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~------~Ggi--~~~~-------a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 256 AALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIY------AGRY--NAEK-------AEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEE------ESSC--CHHH-------HHHHHHTTSCSEEE
T ss_pred HHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEE------eCCC--CHHH-------HHHHHHCCCcceeh
Confidence 6778899999999976422221111357888999999998743 2445 6544 34455566 99999
Q ss_pred Ee
Q psy7930 101 IG 102 (146)
Q Consensus 101 fG 102 (146)
||
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 98
No 274
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=83.06 E-value=7.3 Score=31.32 Aligned_cols=85 Identities=12% Similarity=0.047 Sum_probs=58.2
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+..+.+.||++|-||+. .|.+||. ..+++.+++.+ ++|+.+..-. ..|- -+ .-...+.++|++-
T Consensus 162 ~~~~~~~Ga~~i~l~DT--~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn-~~Gl-a~---------An~laA~~aGa~~ 228 (298)
T 2cw6_A 162 TKKFYSMGCYEISLGDT--IGVGTPGIMKDMLSAVMQEVPLAALAVHCHD-TYGQ-AL---------ANTLMALQMGVSV 228 (298)
T ss_dssp HHHHHHTTCSEEEEEET--TSCCCHHHHHHHHHHHHHHSCGGGEEEEEBC-TTSC-HH---------HHHHHHHHTTCCE
T ss_pred HHHHHHcCCCEEEecCC--CCCcCHHHHHHHHHHHHHhCCCCeEEEEECC-CCch-HH---------HHHHHHHHhCCCE
Confidence 55578889999999985 6899995 67889888888 5888887776 3331 11 2355566789985
Q ss_pred EEEeeec----------CCCCcCHHHHHHHHH
Q psy7930 99 FVIGALT----------GEQEIDIEFIRQLKT 120 (146)
Q Consensus 99 ~VfG~L~----------~dg~iD~~~~~~Li~ 120 (146)
|= +.+. .-|.++.+.+-..+.
T Consensus 229 vd-~tv~GlG~cp~a~g~aGN~~~E~lv~~l~ 259 (298)
T 2cw6_A 229 VD-SSVAGLGGCPYAQGASGNLATEDLVYMLE 259 (298)
T ss_dssp EE-EBTTSCCCCTTSCSSCCBCBHHHHHHHHH
T ss_pred EE-eecccccCCCCCCCCcCChhHHHHHHHHH
Confidence 53 3344 356676665555544
No 275
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=83.06 E-value=0.87 Score=36.50 Aligned_cols=105 Identities=18% Similarity=0.109 Sum_probs=66.1
Q ss_pred HHHHHHHcCCCEEEecCCCCCC-CCCCCHHHHHHHHhhCC-CcEEEEEccCC---C-CCcccCHH-----HHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEG-GLTPTLGLYRVIKRLVL-VPVFVMIRVRA---G-FDFVFSQA-----EKEIMALDCH 89 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~G-GlTPS~g~i~~~~~~~~-ipv~vMIRP~R---~-gdF~Ys~~-----E~~~M~~dI~ 89 (146)
++.... .||+||=+.+.+-.. | .+.+.+++++.+.++ --|.++|-. + + |-++++.. .+....+=++
T Consensus 89 ~~~~~l-~Ga~~Viigs~a~~~~g-~~~p~~~~~~~~~~g~~~ivv~iD~-k~~~~~g~~V~~~gw~~~t~~~~~~e~a~ 165 (260)
T 2agk_A 89 NCLEWL-KWASKVIVTSWLFTKEG-HFQLKRLERLTELCGKDRIVVDLSC-RKTQDGRWIVAMNKWQTLTDLELNADTFR 165 (260)
T ss_dssp THHHHT-TTCSCEEECGGGBCTTC-CBCHHHHHHHHHHHCGGGEEEEEEE-EEEETTEEEEEETTTTEEEEEEESHHHHH
T ss_pred HHHHHh-cCCCEEEECcHHHhhcC-CCCHHHHHHHHHHhCcCcEEEEEEe-eecCCCceEEEEcCCccccCccHHHHHHH
Confidence 667777 999999999876554 5 455688988887664 346666654 3 3 22443211 0111113355
Q ss_pred HHHHcCCCEEEEeeecCCCC---cCHHHHHHHHHHhC---CCCeEE
Q psy7930 90 QFVESGADGFVIGALTGEQE---IDIEFIRQLKTIIG---DRPITF 129 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg~---iD~~~~~~Li~~a~---~~~vtF 129 (146)
.+.++ ++.|++=-.+.||. .|.+.++++.++.. +.|++-
T Consensus 166 ~~~~~-a~~il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIa 210 (260)
T 2agk_A 166 ELRKY-TNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVY 210 (260)
T ss_dssp HHTTT-CSEEEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHh-cCEEEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEE
Confidence 66778 99999977777664 79999999999884 677664
No 276
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=82.97 E-value=3.6 Score=33.54 Aligned_cols=63 Identities=21% Similarity=0.126 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
++.+.+-+++|||-|=+= | .|+...++++.+.+++|++++..| + .++ .+.++++|..-
T Consensus 171 i~Ra~ay~eAGAd~i~~e------~-~~~~~~~~~i~~~~~~P~n~~~~~---~--~~~----------~~eL~~lGv~~ 228 (275)
T 2ze3_A 171 VRRGQAYADAGADGIFVP------L-ALQSQDIRALADALRVPLNVMAFP---G--SPV----------PRALLDAGAAR 228 (275)
T ss_dssp HHHHHHHHHTTCSEEECT------T-CCCHHHHHHHHHHCSSCEEEECCT---T--SCC----------HHHHHHTTCSE
T ss_pred HHHHHHHHHCCCCEEEEC------C-CCCHHHHHHHHHhcCCCEEEecCC---C--CCC----------HHHHHHcCCcE
Confidence 456778889999977552 3 399999999999999999877555 2 233 34566778887
Q ss_pred EEEee
Q psy7930 99 FVIGA 103 (146)
Q Consensus 99 ~VfG~ 103 (146)
+.+|.
T Consensus 229 v~~~~ 233 (275)
T 2ze3_A 229 VSFGQ 233 (275)
T ss_dssp EECTT
T ss_pred EEECh
Confidence 77774
No 277
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=82.96 E-value=5.2 Score=32.29 Aligned_cols=90 Identities=14% Similarity=0.033 Sum_probs=58.2
Q ss_pred cccceeEEEecCHHHHHHH---HHcCCCEEEecCCCCCCCCCCCHH-HHHHHHh-hCCCcEEEEEccCC-CCCcccCHHH
Q psy7930 7 WNKTTLEVCVDSVASALAA---VRGGADRLELCAALSEGGLTPTLG-LYRVIKR-LVLVPVFVMIRVRA-GFDFVFSQAE 80 (146)
Q Consensus 7 ~~~~~lEvcv~s~~~a~~A---~~~GAdRIELc~~l~~GGlTPS~g-~i~~~~~-~~~ipv~vMIRP~R-~gdF~Ys~~E 80 (146)
..++.+=+...|.+++.++ ...|||=|||.-++-. .++.. +.+++++ ..++|+.+-+|++. ||-|..++++
T Consensus 34 ~pkIcvpl~~~t~~e~~~~~~~~~~gaD~VElRvD~l~---~~~~~~v~~~l~~~~~~~PiI~T~Rt~~EGG~~~~~~~~ 110 (259)
T 3l9c_A 34 SMKIVVPVMPQNIEEANQLDLTRIDSTDIIEWRADYLV---KDDILTVAPAIFEKFSGHEVIFTLRTEKEGGNISLSNED 110 (259)
T ss_dssp CCEEEEEECCSSHHHHHHCCCTTCCTTCEEEEEGGGSC---GGGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHH
T ss_pred CcEEEEEecCCCHHHHHHHHHhhccCCCEEEEEecccc---chhHHHHHHHHHHhcCCCcEEEEEeehhhCCCCCCCHHH
Confidence 3445566667888888742 3469999999987654 23332 3334444 35899999999844 6778888887
Q ss_pred HHHHHHHHHHHHHcCCCEEEE
Q psy7930 81 KEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~Vf 101 (146)
...+.+.+. +..|+|-|-+
T Consensus 111 y~~ll~~~~--~~~~~dyIDV 129 (259)
T 3l9c_A 111 YLAIIRDIA--ALYQPDYIDF 129 (259)
T ss_dssp HHHHHHHHH--HHHCCSEEEE
T ss_pred HHHHHHHHH--HhcCCCEEEE
Confidence 766555432 2256665433
No 278
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=82.88 E-value=8.3 Score=33.63 Aligned_cols=87 Identities=15% Similarity=0.174 Sum_probs=60.5
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
++.....+.+.||.=|-.... .-=...|...++++++.+++|| +|= ||..++.+ |..++.+|||
T Consensus 69 ~~~~iA~~y~~~A~~IsvLTd--~~~F~gs~~dL~~vr~~v~lPv---LrK----DFI~d~~Q-------i~ea~~~GAD 132 (452)
T 1pii_A 69 DPARIAAIYKHYASAISVLTD--EKYFQGSFNFLPIVSQIAPQPI---LCK----DFIIDPYQ-------IYLARYYQAD 132 (452)
T ss_dssp CHHHHHHHHTTTCSEEEEECC--STTTCCCTTHHHHHHHHCCSCE---EEE----SCCCSHHH-------HHHHHHTTCS
T ss_pred CHHHHHHHHHhhCcEEEEEec--ccccCCCHHHHHHHHHhcCCCe---EEE----eccCCHHH-------HHHHHHcCCC
Confidence 344444444445988876542 1222337889999999999998 565 48877653 4558999999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhCC
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~~ 124 (146)
.+.+=+ . .++.+.+++|++.|+.
T Consensus 133 ~ILLi~---a-~l~~~~l~~l~~~a~~ 155 (452)
T 1pii_A 133 ACLLML---S-VLDDDQYRQLAAVAHS 155 (452)
T ss_dssp EEEEET---T-TCCHHHHHHHHHHHHH
T ss_pred EEEEEc---c-cCCHHHHHHHHHHHHH
Confidence 987533 1 4677899999999973
No 279
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=82.80 E-value=5.4 Score=31.82 Aligned_cols=77 Identities=16% Similarity=0.136 Sum_probs=50.0
Q ss_pred HHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 25 AVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 25 A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
|+-.|-+-+=|-+ -|.+....+++++++.+ ++||.+ ||+ .-|.+ +++.+. .|||++|+|=
T Consensus 149 a~~~g~~~VYld~----sG~~~~~~~i~~i~~~~~~~Pv~v------GGG-I~t~e-------~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 149 SELLQLPIFYLEY----SGVLGDIEAVKKTKAVLETSTLFY------GGG-IKDAE-------TAKQYA-EHADVIVVGN 209 (228)
T ss_dssp HHHTTCSEEEEEC----TTSCCCHHHHHHHHHHCSSSEEEE------ESS-CCSHH-------HHHHHH-TTCSEEEECT
T ss_pred HHHcCCCEEEecC----CCCcCCHHHHHHHHHhcCCCCEEE------eCC-CCCHH-------HHHHHH-hCCCEEEECh
Confidence 3334567665554 35666899999999999 799865 332 22333 334444 5999999994
Q ss_pred ecCCCCcCHHHHHHHHHHhC
Q psy7930 104 LTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 104 L~~dg~iD~~~~~~Li~~a~ 123 (146)
.--. |.+..++++++.+
T Consensus 210 a~v~---~p~~~~~~v~a~~ 226 (228)
T 3vzx_A 210 AVYE---DFDRALKTVAAVK 226 (228)
T ss_dssp HHHH---CHHHHHHHHHHHH
T ss_pred HHhc---CHHHHHHHHHHHh
Confidence 3211 5777788777653
No 280
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=82.75 E-value=14 Score=34.04 Aligned_cols=100 Identities=16% Similarity=0.056 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh---CCCcEEEEEccCCCCCc------ccCHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL---VLVPVFVMIRVRAGFDF------VFSQAEKEIMALDCH 89 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~---~~ipv~vMIRP~R~gdF------~Ys~~E~~~M~~dI~ 89 (146)
..++..|.++|++.+-+..++. ....++...+. .+..+...|-- .+|| .|+.+. ..+-++
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n------~l~~l~~~i~~ak~~G~~v~~~i~~--~~d~~dp~r~~~~~e~---~~~~a~ 268 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLN------YLPNMLLGMEAAGSAGGVVEAAISY--TGDVADPSRTKYSLQY---YMGLAE 268 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSC------CHHHHHHHHHHHHTTTSEEEEEEEC--CSCTTCTTCCTTCHHH---HHHHHH
T ss_pred HHHHHHHHhcCcCEEEEEecHH------HHHHHHHHHHHHHHcCCeEEEEEEe--eccccCCCCCCCCHHH---HHHHHH
Confidence 3677889999999999997664 24444444433 24555544433 3322 234444 445566
Q ss_pred HHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC----CCCeEEee
Q psy7930 90 QFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG----DRPITFHR 131 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~----~~~vtFHR 131 (146)
.+.++||+-|.+. +--|-.......+|+++.+ +.++-||-
T Consensus 269 ~l~~~Ga~~I~l~--DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~ 312 (718)
T 3bg3_A 269 ELVRAGTHILCIK--DMAGLLKPTACTMLVSSLRDRFPDLPLHIHT 312 (718)
T ss_dssp HHHHHTCSEEEEE--CTTSCCCHHHHHHHHHHHHHHSTTCCEEEEC
T ss_pred HHHHcCCCEEEEc--CcCCCcCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 6778899977664 6678888888888877663 57888883
No 281
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=82.70 E-value=14 Score=30.96 Aligned_cols=68 Identities=18% Similarity=0.131 Sum_probs=46.4
Q ss_pred CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee----ecCCCCcCHHHHHHHHHH
Q psy7930 46 PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA----LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 46 PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~----L~~dg~iD~~~~~~Li~~ 121 (146)
.+...++.+++..++||.|=.- -+ .+|.+.+.++|+|+|++.- --..|.-+.+.+.++.++
T Consensus 216 ~~~~~i~~lr~~~~~PvivK~v--------~~-------~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~ 280 (368)
T 2nli_A 216 ISPRDIEEIAGHSGLPVFVKGI--------QH-------PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAER 280 (368)
T ss_dssp CCHHHHHHHHHHSSSCEEEEEE--------CS-------HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEcC--------CC-------HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHH
Confidence 4567788888888888765211 11 2667889999999999932 112345677888888887
Q ss_pred hC-CCCeE
Q psy7930 122 IG-DRPIT 128 (146)
Q Consensus 122 a~-~~~vt 128 (146)
.+ .+|+.
T Consensus 281 v~~~ipVi 288 (368)
T 2nli_A 281 VNKRVPIV 288 (368)
T ss_dssp HTTSSCEE
T ss_pred hCCCCeEE
Confidence 75 46654
No 282
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=82.68 E-value=1.7 Score=37.60 Aligned_cols=75 Identities=20% Similarity=0.295 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCCEEEec-CCCCCCCCC----CC--HHHHHHHHhh--------------------CCCc-EEEEEccCC
Q psy7930 19 VASALAAVRGGADRLELC-AALSEGGLT----PT--LGLYRVIKRL--------------------VLVP-VFVMIRVRA 70 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc-~~l~~GGlT----PS--~g~i~~~~~~--------------------~~ip-v~vMIRP~R 70 (146)
+..+......-||-|||+ |.....|+. |. ..+++.+++. .++| |.|=|+| -
T Consensus 201 y~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~p-d 279 (415)
T 3i65_A 201 LKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAP-D 279 (415)
T ss_dssp HHHHHHHHGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECS-C
T ss_pred HHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEecC-C
Confidence 333333444459999998 333334442 22 3456666654 2689 9999999 2
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
.+++++. +=++.+.+.|+|||++-
T Consensus 280 -----~~~~~i~---~iA~~a~~aGaDgIiv~ 303 (415)
T 3i65_A 280 -----LNQEQKK---EIADVLLETNIDGMIIS 303 (415)
T ss_dssp -----CCHHHHH---HHHHHHHHHTCSEEEEC
T ss_pred -----CCHHHHH---HHHHHHHHcCCcEEEEe
Confidence 2455543 34566788999999865
No 283
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=82.44 E-value=7.2 Score=31.35 Aligned_cols=97 Identities=10% Similarity=0.028 Sum_probs=63.7
Q ss_pred HHHHHHHHHcCCCEEEecCCCC--CCCCCCCHHH---HHHHHhh---CCCcEEEEEccCCCCCcccC----HHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALS--EGGLTPTLGL---YRVIKRL---VLVPVFVMIRVRAGFDFVFS----QAEKEIMAL 86 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~--~GGlTPS~g~---i~~~~~~---~~ipv~vMIRP~R~gdF~Ys----~~E~~~M~~ 86 (146)
.+.+....+.||.-|-|=+... -..+.|.-.. |+.+++. .++|..|+=|- +.|.-. .+.++...+
T Consensus 96 ~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRt---d~~~~g~~~~~~~~~~ai~ 172 (255)
T 2qiw_A 96 ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRT---DAVKLGADVFEDPMVEAIK 172 (255)
T ss_dssp HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEE---CHHHHCTTTSSSHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEe---chhhccCCcchHHHHHHHH
Confidence 6677778889999988865421 1123343333 4444333 27998888876 222211 236899999
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+.+.+.++|||++++=++ -+.+..+++.+..+
T Consensus 173 ra~a~~eAGAd~i~~e~~-----~~~~~~~~i~~~~~ 204 (255)
T 2qiw_A 173 RIKLMEQAGARSVYPVGL-----STAEQVERLVDAVS 204 (255)
T ss_dssp HHHHHHHHTCSEEEECCC-----CSHHHHHHHHTTCS
T ss_pred HHHHHHHcCCcEEEEcCC-----CCHHHHHHHHHhCC
Confidence 999999999999999443 45667777776554
No 284
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=82.39 E-value=6.1 Score=32.36 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=60.5
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHH---HHHHHHh---hCCCcEEEEEccCCCCCcc--cCHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLG---LYRVIKR---LVLVPVFVMIRVRAGFDFV--FSQAEKEIMALDCHQF 91 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g---~i~~~~~---~~~ipv~vMIRP~R~gdF~--Ys~~E~~~M~~dI~~~ 91 (146)
.++..|.+.|||=+-+--.+... .|... .++++.+ ..++|+.+++-| |+..+- +++ -+...+-++.+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d--~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~-~g~~v~~~~~~--~~~v~~aa~~a 186 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSD--EDAQQRLNMVKEFNELCHSNGLLSIIEPVV-RPPRCGDKFDR--EQAIIDAAKEL 186 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTT--SCHHHHHHHHHHHHHHHHTTTCEEEEEEEE-CCCSSCSCCCH--HHHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCC--ccHHHHHHHHHHHHHHHHHcCCcEEEEEEC-CCCccccCCCh--hHHHHHHHHHH
Confidence 56677889999988844333211 22233 3333333 348999999999 776543 232 14555668889
Q ss_pred HHcCCCEEEEee-ecCCCCcCHHHHHHHHHH
Q psy7930 92 VESGADGFVIGA-LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 92 ~~~GadG~VfG~-L~~dg~iD~~~~~~Li~~ 121 (146)
.++|+|=+=++. .++-| +.+.++++++.
T Consensus 187 ~~lGaD~iKv~~~~~~~g--~~~~~~~vv~~ 215 (304)
T 1to3_A 187 GDSGADLYKVEMPLYGKG--ARSDLLTASQR 215 (304)
T ss_dssp TTSSCSEEEECCGGGGCS--CHHHHHHHHHH
T ss_pred HHcCCCEEEeCCCcCCCC--CHHHHHHHHHh
Confidence 999999666666 33222 77777777776
No 285
>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES; 2.00A {Vespula vulgaris}
Probab=82.33 E-value=0.78 Score=38.98 Aligned_cols=57 Identities=14% Similarity=0.194 Sum_probs=38.1
Q ss_pred CCcEEEEEccCCCCC--c-ccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHH
Q psy7930 59 LVPVFVMIRVRAGFD--F-VFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 59 ~ipv~vMIRP~R~gd--F-~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~ 120 (146)
.+||++-.|| ...| . .+|.++ +...|...+.+|++|||+=- +.+..-..+.|..|-+
T Consensus 254 ~~pV~~Y~r~-~y~d~~~~fLs~~D---L~~TigesaalGa~GiViWG-ss~~~~s~~~C~~l~~ 313 (331)
T 2atm_A 254 SPKVLSYWWY-VYQDETNTFLTETD---VKKTFQEIVINGGDGIIIWG-SSSDVNSLSKCKRLQD 313 (331)
T ss_dssp CCEEEEEEES-EETTEEEEECCHHH---HHHHHHHHHHTTCCEEEEEC-CGGGGSSHHHHHHHHH
T ss_pred CCceEEEeee-EecCCccccccHHH---HHHHHHHHHHcCCCeEEEec-cccccccHHHHHHHHH
Confidence 6899999999 6543 2 345555 45788888999999999831 1122344556666544
No 286
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=81.71 E-value=14 Score=35.64 Aligned_cols=102 Identities=12% Similarity=0.031 Sum_probs=67.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCc------ccCHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDF------VFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF------~Ys~~E~~~M~~dI~~~~ 92 (146)
.++..|.++|.|++-+..+++. ... ...++.++ ..+.-+.+.|.+ -++-| .|+.+.+.. -++.+.
T Consensus 631 ~~v~~a~~~Gvd~irif~~~sd---~~~~~~~~~~~~-e~g~~~~~~i~~-~~~~~~pe~~~~~~~~~~~~---~a~~~~ 702 (1150)
T 3hbl_A 631 KFVQESAKAGIDVFRIFDSLNW---VDQMKVANEAVQ-EAGKISEGTICY-TGDILNPERSNIYTLEYYVK---LAKELE 702 (1150)
T ss_dssp HHHHHHHHTTCCEEEEECTTCC---GGGGHHHHHHHH-HTTCEEEEEEEC-CSCTTCTTTCSSSSHHHHHH---HHHHHH
T ss_pred HHHHHHHhCCcCEEEEEeeCCH---HHHHHHHHHHHH-HHhhheeEEEee-cccccChhhcCCCCHHHHHH---HHHHHH
Confidence 4688899999999999876654 122 22333333 345556677777 44322 355554444 456678
Q ss_pred HcCCCEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEee
Q psy7930 93 ESGADGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFHR 131 (146)
Q Consensus 93 ~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFHR 131 (146)
++|++-|.+. +--|........+|+++.+ ++++-||-
T Consensus 703 ~~Ga~~i~l~--Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~ 742 (1150)
T 3hbl_A 703 REGFHILAIK--DMAGLLKPKAAYELIGELKSAVDLPIHLHT 742 (1150)
T ss_dssp HTTCSEEEEE--ETTCCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HcCCCeeeEc--CccCCCCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 8899976554 6778888888888887765 67888874
No 287
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=81.60 E-value=1.7 Score=36.80 Aligned_cols=67 Identities=13% Similarity=0.043 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCC----CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVL----VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~----ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+-+..+.+.||++|-||+ ..|.+||. ..+++.+++.+. +|+.+---- ..| +. ..-...+.+
T Consensus 161 ~~~~~~~~~Ga~~i~l~D--T~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hn-d~G--------lA--vAN~laAv~ 227 (370)
T 3rmj_A 161 EICGAVIEAGATTINIPD--TVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHN-DLG--------LA--VANSLAALK 227 (370)
T ss_dssp HHHHHHHHHTCCEEEEEC--SSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBC-TTS--------CH--HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecC--ccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCC-CCC--------hH--HHHHHHHHH
Confidence 446678899999999999 47999995 678888888774 666554433 112 22 234455667
Q ss_pred cCCCEE
Q psy7930 94 SGADGF 99 (146)
Q Consensus 94 ~GadG~ 99 (146)
+||+-|
T Consensus 228 aGa~~v 233 (370)
T 3rmj_A 228 GGARQV 233 (370)
T ss_dssp TTCCEE
T ss_pred hCCCEE
Confidence 888643
No 288
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=81.48 E-value=8.7 Score=31.60 Aligned_cols=87 Identities=14% Similarity=0.190 Sum_probs=53.7
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEc--cCC---CCCcccC--HHHHHHHHHHHHHHHHcC
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIR--VRA---GFDFVFS--QAEKEIMALDCHQFVESG 95 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIR--P~R---~gdF~Ys--~~E~~~M~~dI~~~~~~G 95 (146)
....++||+=|-|= || .--...|+.+.+ .+|||+.-|. |++ -|+|.-- .++.+.+.+|.+.+.++|
T Consensus 102 ~rl~kaGa~aVklE-----dg-~e~~~~I~al~~-agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eAG 174 (275)
T 1o66_A 102 AELMAAGAHMVKLE-----GG-VWMAETTEFLQM-RGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDAG 174 (275)
T ss_dssp HHHHHTTCSEEEEE-----CS-GGGHHHHHHHHH-TTCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEEEC-----Cc-HHHHHHHHHHHH-cCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHcC
Confidence 35677899988774 34 223555665544 5899876665 511 2556431 145789999999999999
Q ss_pred CCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 96 ADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 96 adG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
|+++|+=++.+ +..+++.+..
T Consensus 175 A~~ivlE~vp~------~~a~~it~~l 195 (275)
T 1o66_A 175 AAVVLMECVLA------ELAKKVTETV 195 (275)
T ss_dssp CSEEEEESCCH------HHHHHHHHHC
T ss_pred CcEEEEecCCH------HHHHHHHHhC
Confidence 99999977542 3455555544
No 289
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=81.45 E-value=6.9 Score=30.98 Aligned_cols=86 Identities=19% Similarity=0.177 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCCEEEecCCC-CCCCCCCCH-----HHHHHHHhhCCCcEEEEEccCCCCCcccC-HHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAAL-SEGGLTPTL-----GLYRVIKRLVLVPVFVMIRVRAGFDFVFS-QAEKEIMALDCHQF 91 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l-~~GGlTPS~-----g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys-~~E~~~M~~dI~~~ 91 (146)
.+.+....+.+...+=+.+-. ..|..||.. .+++.+++..++||.| +|=-+ .+ +++.
T Consensus 160 ~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~v--------G~GI~t~e-------~~~~- 223 (262)
T 2ekc_A 160 RKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVVV--------GFGVSKKE-------HARE- 223 (262)
T ss_dssp HHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEEE--------ESSCCSHH-------HHHH-
T ss_pred HHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEEE--------eCCCCCHH-------HHHH-
Confidence 344444444455555332322 234445533 7888998888999865 23333 43 3444
Q ss_pred HHcCCCEEEEe-----eecCCCCcCHHHHHHHHHHhC
Q psy7930 92 VESGADGFVIG-----ALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 92 ~~~GadG~VfG-----~L~~dg~iD~~~~~~Li~~a~ 123 (146)
...||||+|+| .+.++ +.++++++++..+
T Consensus 224 ~~~gADgvIVGSai~~~~~~~---~~~~~~~~~~~~~ 257 (262)
T 2ekc_A 224 IGSFADGVVVGSALVKLAGQK---KIEDLGNLVKELK 257 (262)
T ss_dssp HHTTSSEEEECHHHHHHHHTT---CHHHHHHHHHHHH
T ss_pred HHcCCCEEEECHHHHhhhhhh---hHHHHHHHHHHHH
Confidence 35689999999 33222 6778888887653
No 290
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=81.19 E-value=22 Score=29.47 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=45.3
Q ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeee----cCCCCcCHHHHHHHHHHh
Q psy7930 47 TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGAL----TGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 47 S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L----~~dg~iD~~~~~~Li~~a 122 (146)
+...++.+++..++||.+=.+. +. +|++.+.++|+|+|+++-- ...+..+.+.+.++.+..
T Consensus 213 ~~~~i~~l~~~~~~pv~vK~~~--------~~-------e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~ 277 (370)
T 1gox_A 213 SWKDVAWLQTITSLPILVKGVI--------TA-------EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAA 277 (370)
T ss_dssp CHHHHHHHHHHCCSCEEEECCC--------SH-------HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCCEEEEecC--------CH-------HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHh
Confidence 4567888888889998762222 22 5678899999999999520 112336777788888766
Q ss_pred C-CCCeE
Q psy7930 123 G-DRPIT 128 (146)
Q Consensus 123 ~-~~~vt 128 (146)
+ .+++.
T Consensus 278 ~~~ipvi 284 (370)
T 1gox_A 278 QGRIPVF 284 (370)
T ss_dssp TTSSCEE
T ss_pred CCCCEEE
Confidence 4 45554
No 291
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=81.17 E-value=4.6 Score=30.99 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=51.2
Q ss_pred cCHHHHHHHHHc---CCCEEEecCCC-CCCCCCC---CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 17 DSVASALAAVRG---GADRLELCAAL-SEGGLTP---TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 17 ~s~~~a~~A~~~---GAdRIELc~~l-~~GGlTP---S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
.+..+...+... ++|.|-+-+-. ..||.+- ....++++++.. ++||.+- || = +. +.+
T Consensus 123 ~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~-----GG-I--~~-------~ni 187 (228)
T 1h1y_A 123 GTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVD-----GG-L--GP-------STI 187 (228)
T ss_dssp TSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEE-----SS-C--ST-------TTH
T ss_pred CCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEE-----CC-c--CH-------HHH
Confidence 455555555555 99998885532 3335332 245677777777 7887552 33 1 11 256
Q ss_pred HHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHHH
Q psy7930 89 HQFVESGADGFVIG-ALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 89 ~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~~ 121 (146)
..+.+.|+|+||+| ++.....+ .+++++|.+.
T Consensus 188 ~~~~~aGaD~vvvGsai~~~~d~-~~~~~~l~~~ 220 (228)
T 1h1y_A 188 DVAASAGANCIVAGSSIFGAAEP-GEVISALRKS 220 (228)
T ss_dssp HHHHHHTCCEEEESHHHHTSSCH-HHHHHHHHHH
T ss_pred HHHHHcCCCEEEECHHHHCCCCH-HHHHHHHHHH
Confidence 66677799999999 23322112 3455555543
No 292
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=80.94 E-value=2.3 Score=33.88 Aligned_cols=50 Identities=24% Similarity=0.361 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 83 IMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
...+.++.+.+.|+.||-+|.--.+..+|-+....+.++|. ++++.+|-.
T Consensus 128 ~a~~el~~~~~~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~ 179 (334)
T 2hbv_A 128 LACKEASRAVAAGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPW 179 (334)
T ss_dssp HHHHHHHHHHHHTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECC
T ss_pred HHHHHHHHHHHcCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCC
Confidence 34466777778899999988754455688889999999885 899999974
No 293
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=80.88 E-value=4.7 Score=33.61 Aligned_cols=95 Identities=17% Similarity=0.207 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCCEEEecCC--------------C---CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCc
Q psy7930 20 ASALAAVRGGADRLELCAA--------------L---SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDF 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~--------------l---~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF 74 (146)
+.|..|.++|.|=|||..+ - .-|| +. ...+++.+++.+ ++||.|=|+| .+|
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGG-slenR~rf~~eiv~aVr~avg~d~pv~vRls~---~~~ 222 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKNWPENKPIFVRVSA---DDY 222 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHTSCTTSCEEEEEEC---CCS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhcc-chHhHHHHHHHHHHHHHhcCCccCCeEEEeec---hhh
Confidence 5678899999999999832 1 2244 22 145788888887 5788666666 344
Q ss_pred c---cCHHHHHHHHHHHHHHHHcCCCEEEE--eeecC-----CCCcCHHHHHHHHHHh
Q psy7930 75 V---FSQAEKEIMALDCHQFVESGADGFVI--GALTG-----EQEIDIEFIRQLKTII 122 (146)
Q Consensus 75 ~---Ys~~E~~~M~~dI~~~~~~GadG~Vf--G~L~~-----dg~iD~~~~~~Li~~a 122 (146)
. ++.+|. .+=++.+.++ +|.+.+ |-..+ .-..+.+..+++.+..
T Consensus 223 ~~~g~~~~~~---~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~ 276 (343)
T 3kru_A 223 MEGGINIDMM---VEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC 276 (343)
T ss_dssp STTSCCHHHH---HHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH
T ss_pred hccCccHHHH---HHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc
Confidence 3 334444 3445666777 999887 32211 1124666666666654
No 294
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=80.86 E-value=2 Score=35.53 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=46.4
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
-+..+.+.||++|=||+. .|.+|| -..+++.+++.+ ++|+.+---- ..| +. ..-...+.++|++
T Consensus 174 ~~~~~~~~Ga~~i~l~DT--~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hn-d~G--------lA--~AN~laAv~aGa~ 240 (337)
T 3ble_A 174 LVEHLSKEHIERIFLPDT--LGVLSPEETFQGVDSLIQKYPDIHFEFHGHN-DYD--------LS--VANSLQAIRAGVK 240 (337)
T ss_dssp HHHHHHTSCCSEEEEECT--TCCCCHHHHHHHHHHHHHHCTTSCEEEECBC-TTS--------CH--HHHHHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEEecC--CCCcCHHHHHHHHHHHHHhcCCCeEEEEecC-Ccc--------hH--HHHHHHHHHhCCC
Confidence 466678899999999995 899999 477899999888 7887765544 222 11 2334445567876
Q ss_pred EE
Q psy7930 98 GF 99 (146)
Q Consensus 98 G~ 99 (146)
-|
T Consensus 241 ~v 242 (337)
T 3ble_A 241 GL 242 (337)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 295
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=80.83 E-value=1.7 Score=37.63 Aligned_cols=68 Identities=19% Similarity=0.288 Sum_probs=49.0
Q ss_pred HHHHHHHcCCCEEEecCCC-----------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHH
Q psy7930 21 SALAAVRGGADRLELCAAL-----------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEK 81 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l-----------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~ 81 (146)
=|..++++|||-|-+-... ..||++- |...++++++.+ ++||.. -|| +.|.
T Consensus 288 iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg-----~GG--I~s~--- 357 (415)
T 3i65_A 288 IADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA-----SGG--IFSG--- 357 (415)
T ss_dssp HHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE-----CSS--CCSH---
T ss_pred HHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE-----ECC--CCCH---
Confidence 3778889999999877533 2577753 457899999888 799864 255 3344
Q ss_pred HHHHHHHHHHHHcCCCEEEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG 102 (146)
+|+..+..+|||+|.+|
T Consensus 358 ----eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 358 ----LDALEKIEAGASVCQLY 374 (415)
T ss_dssp ----HHHHHHHHHTEEEEEES
T ss_pred ----HHHHHHHHcCCCEEEEc
Confidence 45556667899999998
No 296
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=80.76 E-value=1.4 Score=34.48 Aligned_cols=88 Identities=22% Similarity=0.235 Sum_probs=52.3
Q ss_pred cCHHHHHHHHHcCCCEEEecC-CCCCCCCC--C-CHHHHHHHHhhC-----CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCA-ALSEGGLT--P-TLGLYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~-~l~~GGlT--P-S~g~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
.+..+...+...++|.|=+-+ +...||.. | +...++++++.. ++||.|- || = |. +.
T Consensus 122 ~t~~e~~~~~~~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~-----GG-I--~~-------~~ 186 (230)
T 1tqj_A 122 STPLDFLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVD-----GG-L--KP-------NN 186 (230)
T ss_dssp TCCGGGGTTTGGGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEE-----SS-C--CT-------TT
T ss_pred CCcHHHHHHHHhcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEE-----CC-c--CH-------HH
Confidence 666777777778999775544 33344532 1 356777777766 6787662 33 1 11 46
Q ss_pred HHHHHHcCCCEEEEe-eecCCCCcCHHHHHHHHH
Q psy7930 88 CHQFVESGADGFVIG-ALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 88 I~~~~~~GadG~VfG-~L~~dg~iD~~~~~~Li~ 120 (146)
+..+.++||||||+| ++.....+ .++.++|.+
T Consensus 187 ~~~~~~aGad~vvvGSai~~a~d~-~~~~~~l~~ 219 (230)
T 1tqj_A 187 TWQVLEAGANAIVAGSAVFNAPNY-AEAIAGVRN 219 (230)
T ss_dssp THHHHHHTCCEEEESHHHHTSSCH-HHHHHHHHT
T ss_pred HHHHHHcCCCEEEECHHHHCCCCH-HHHHHHHHH
Confidence 777888999999999 33322111 345666654
No 297
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=80.56 E-value=7.8 Score=32.55 Aligned_cols=80 Identities=15% Similarity=0.031 Sum_probs=49.3
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCCC------HHHHHHHHhhCCC-cEEEEEccCCCC--C
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTPT------LGLYRVIKRLVLV-PVFVMIRVRAGF--D 73 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTPS------~g~i~~~~~~~~i-pv~vMIRP~R~g--d 73 (146)
+.|..|.++|.|-|||..+- .-|| +.. ..+++.+++.++- ||-|=|+| ... +
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~~v~vRls~-~~~~~g 242 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAARVGVHLAP-RGDAHT 242 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGGGEEEEECT-TCCSSS
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCCeEEEeccc-ccccCC
Confidence 56788999999999998641 1155 221 4577777777743 77666666 321 1
Q ss_pred cccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 74 FVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 74 F~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
+.. .+..+...+=++.+.++|+|-+-+-
T Consensus 243 ~~~-~~~~~~~~~la~~l~~~Gvd~i~v~ 270 (361)
T 3gka_A 243 MGD-SDPAATFGHVARELGRRRIAFLFAR 270 (361)
T ss_dssp CCC-SCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCC-CCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 111 1123344455677788899988764
No 298
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=80.53 E-value=7.7 Score=32.14 Aligned_cols=96 Identities=13% Similarity=0.043 Sum_probs=60.9
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCC----C---CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLT----P---TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlT----P---S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+....+.|.+.||.=+- ..||-| | +...++.+++..++++.+|+|. .. .|. ++++. +...++.
T Consensus 30 a~~L~~aGv~~IEvg~~-~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~-~~---~~~-~dv~~----~~~a~~~ 99 (320)
T 3dxi_A 30 ILAMNELPIDYLEVGYR-NKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNE-KN---TTP-EDLNH----LLLPIIG 99 (320)
T ss_dssp HHHHHTTTCCEEEEEEC-CSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEG-GG---CCG-GGHHH----HHGGGTT
T ss_pred HHHHHHhCCCEEEEecc-cCCccccccccccChHHHHHHHhhccCCeEEEEecC-CC---CCh-hhHHH----HHHhhhc
Confidence 33456679999998864 345554 1 2677888877668899999988 33 333 23322 2223458
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
|+|.|-+-..- =+.+...+.++.|+ ++.+.|--
T Consensus 100 Gvd~~ri~~~~----~nle~~~~~v~~ak~~G~~v~~~~ 134 (320)
T 3dxi_A 100 LVDMIRIAIDP----QNIDRAIVLAKAIKTMGFEVGFNV 134 (320)
T ss_dssp TCSEEEEEECG----GGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEEEecH----HHHHHHHHHHHHHHHCCCEEEEEE
Confidence 99998555311 14777788887776 56666643
No 299
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=80.40 E-value=5.5 Score=32.73 Aligned_cols=66 Identities=20% Similarity=0.304 Sum_probs=47.9
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
-++.+.+-+++|||-|=+= | .|+...++++.+.+++|+. |+ | -+..-.+|. +.+.++|+.
T Consensus 170 ai~Ra~ay~eAGAd~i~~e------~-~~~~~~~~~i~~~~~~P~i-i~-~-~g~~~~~~~----------~eL~~lGv~ 229 (287)
T 3b8i_A 170 VIQRTLAYQEAGADGICLV------G-VRDFAHLEAIAEHLHIPLM-LV-T-YGNPQLRDD----------ARLARLGVR 229 (287)
T ss_dssp HHHHHHHHHHTTCSEEEEE------C-CCSHHHHHHHHTTCCSCEE-EE-C-TTCGGGCCH----------HHHHHTTEE
T ss_pred HHHHHHHHHHcCCCEEEec------C-CCCHHHHHHHHHhCCCCEE-Ee-C-CCCCCCCCH----------HHHHHcCCc
Confidence 3567788999999987663 2 3899999999999999998 44 4 233334554 456677887
Q ss_pred EEEEee
Q psy7930 98 GFVIGA 103 (146)
Q Consensus 98 G~VfG~ 103 (146)
-+.+|.
T Consensus 230 ~v~~~~ 235 (287)
T 3b8i_A 230 VVVNGH 235 (287)
T ss_dssp EEECCC
T ss_pred EEEECh
Confidence 777764
No 300
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=80.12 E-value=11 Score=31.13 Aligned_cols=110 Identities=15% Similarity=0.051 Sum_probs=65.6
Q ss_pred EEecCHHHHHHHHHcCCCEEEecCCCCCC------CCCCC--HHHHHHHHhh---CCCcEEEEEccCCCCCccc-CHHHH
Q psy7930 14 VCVDSVASALAAVRGGADRLELCAALSEG------GLTPT--LGLYRVIKRL---VLVPVFVMIRVRAGFDFVF-SQAEK 81 (146)
Q Consensus 14 vcv~s~~~a~~A~~~GAdRIELc~~l~~G------GlTPS--~g~i~~~~~~---~~ipv~vMIRP~R~gdF~Y-s~~E~ 81 (146)
+-+.+..++..|.++|++.|.+....+.- +.|+. ...++.+.+. .++.|. +-+ - +|-| +..+.
T Consensus 94 ~l~~~~~~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~--~~~-~--~~~~~~~~~~ 168 (337)
T 3ble_A 94 GFVDGNKTVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN--VYL-E--DWSNGFRNSP 168 (337)
T ss_dssp EESSTTHHHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE--EEE-E--THHHHHHHCH
T ss_pred EEccchhhHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE--EEE-E--ECCCCCcCCH
Confidence 33445568999999999999987543211 22221 2233333322 244443 333 1 1222 23345
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC----CCCeEEe
Q psy7930 82 EIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG----DRPITFH 130 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~----~~~vtFH 130 (146)
+...+-++.+.++|++.|.+. +--|-.....+.+|++..+ +.++.||
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~--DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H 219 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLP--DTLGVLSPEETFQGVDSLIQKYPDIHFEFH 219 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEE--CTTCCCCHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe--cCCCCcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 555666778889999988775 5567777778777777653 6788888
No 301
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.06 E-value=6.8 Score=36.10 Aligned_cols=71 Identities=17% Similarity=0.241 Sum_probs=47.2
Q ss_pred HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE-EEeeecCCCCcCHHHHHHHHHHhCCC
Q psy7930 48 LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF-VIGALTGEQEIDIEFIRQLKTIIGDR 125 (146)
Q Consensus 48 ~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~-VfG~L~~dg~iD~~~~~~Li~~a~~~ 125 (146)
...++.+++.. ++++.++.|. +.. |-|+..-=.....||+.+.+.|+|-| +|..++ |.+.++..++.++..
T Consensus 164 ~e~l~~l~~~~~~~~l~~l~R~-~n~-vgy~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n-----~l~~l~~~i~~ak~~ 236 (718)
T 3bg3_A 164 WRRLQELRELIPNIPFQMLLRG-ANA-VGYTNYPDNVVFKFCEVAKENGMDVFRVFDSLN-----YLPNMLLGMEAAGSA 236 (718)
T ss_dssp HHHHHHHHHHCSSSCEEEEECG-GGT-TSSSCCCHHHHHHHHHHHHHHTCCEEEEECSSC-----CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcccchHHHHhcc-ccc-ccccccCCcchHHHHHHHHhcCcCEEEEEecHH-----HHHHHHHHHHHHHHc
Confidence 45666666655 6788888886 432 44443222334789999999999976 344443 567888888888743
No 302
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=79.95 E-value=26 Score=29.48 Aligned_cols=69 Identities=9% Similarity=0.171 Sum_probs=48.7
Q ss_pred CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe---eecCC-CCcCHHHHHHHHH
Q psy7930 45 TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIG---ALTGE-QEIDIEFIRQLKT 120 (146)
Q Consensus 45 TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG---~L~~d-g~iD~~~~~~Li~ 120 (146)
+++...++.+++..++||.+=..+ . .+|.+.+.++|+|||++. --..| +..+.+.+.++.+
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~v~-~--------------~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~ 267 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKGIL-T--------------KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVA 267 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEEEC-S--------------HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEecC-c--------------HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHH
Confidence 356788999999999999776554 1 267889999999999982 21112 3456777888877
Q ss_pred HhC-CCCeE
Q psy7930 121 IIG-DRPIT 128 (146)
Q Consensus 121 ~a~-~~~vt 128 (146)
+.+ .+|+.
T Consensus 268 av~~~ipVi 276 (352)
T 3sgz_A 268 AVKGKIEVY 276 (352)
T ss_dssp HHTTSSEEE
T ss_pred HhCCCCeEE
Confidence 765 35554
No 303
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=79.94 E-value=25 Score=30.32 Aligned_cols=106 Identities=15% Similarity=0.056 Sum_probs=63.8
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCC------CCCCCC--HHH----HHHHHhhCCCcEEEEEccCCCCCcccCHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSE------GGLTPT--LGL----YRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~------GGlTPS--~g~----i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
+..+..++..|.++|+++|-+.-+-+. =+.|+. ... ++.+++ .++.|.+- + .-.|.++.+.+.
T Consensus 109 ~r~~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~-~G~~V~~~--~--eda~r~d~~~~~ 183 (423)
T 3ivs_A 109 IRCHMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKS-KGIEVRFS--S--EDSFRSDLVDLL 183 (423)
T ss_dssp EESCHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHT-TTCEEEEE--E--ESGGGSCHHHHH
T ss_pred eccChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHH-CCCEEEEE--E--ccCcCCCHHHHH
Confidence 357899999999999999999732211 245553 222 333332 24554432 3 233667766654
Q ss_pred HHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEe
Q psy7930 83 IMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFH 130 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFH 130 (146)
+=++.+.++|++-|.+. +--|-.....+.++++..+ +.++-||
T Consensus 184 ---~v~~~~~~~Ga~~i~l~--DTvG~~~P~~v~~lv~~l~~~~~~~i~~H 229 (423)
T 3ivs_A 184 ---SLYKAVDKIGVNRVGIA--DTVGCATPRQVYDLIRTLRGVVSCDIECH 229 (423)
T ss_dssp ---HHHHHHHHHCCSEEEEE--ETTSCCCHHHHHHHHHHHHHHCSSEEEEE
T ss_pred ---HHHHHHHHhCCCccccC--CccCcCCHHHHHHHHHHHHhhcCCeEEEE
Confidence 44566778899986654 5567777777777776654 5667766
No 304
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=79.90 E-value=11 Score=31.31 Aligned_cols=67 Identities=22% Similarity=0.269 Sum_probs=48.3
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
++.+.+.+++|||=|=+=+ + |+...++++.+.+++|+.+.+-. .+..=.+| .+.+.++|++-
T Consensus 178 i~Ra~ay~eAGAD~i~~e~------~-~~~~~~~~i~~~~~~P~~~n~~~-~g~tp~~~----------~~eL~~lGv~~ 239 (305)
T 3ih1_A 178 IERANAYVKAGADAIFPEA------L-QSEEEFRLFNSKVNAPLLANMTE-FGKTPYYS----------AEEFANMGFQM 239 (305)
T ss_dssp HHHHHHHHHHTCSEEEETT------C-CSHHHHHHHHHHSCSCBEEECCT-TSSSCCCC----------HHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEcC------C-CCHHHHHHHHHHcCCCEEEeecC-CCCCCCCC----------HHHHHHcCCCE
Confidence 4677888999999986532 2 78999999999999999654433 12111234 56677889999
Q ss_pred EEEee
Q psy7930 99 FVIGA 103 (146)
Q Consensus 99 ~VfG~ 103 (146)
+.+|.
T Consensus 240 v~~~~ 244 (305)
T 3ih1_A 240 VIYPV 244 (305)
T ss_dssp EEECS
T ss_pred EEEch
Confidence 99884
No 305
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=79.55 E-value=6.2 Score=31.84 Aligned_cols=94 Identities=15% Similarity=0.057 Sum_probs=56.5
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCCCH--------HHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTPTL--------GLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTPS~--------g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
..+.+.|+++|-|. ||-+|.+ .+++.+++..++++ .+.| |. -++ +.++.++++
T Consensus 101 ~~~~~~G~~~i~l~-----gGe~p~~~~~~~~~~~l~~~ik~~~~i~i--~~s~---g~--~~~-------e~l~~L~~a 161 (350)
T 3t7v_A 101 KTLKGAGFHMVDLT-----MGEDPYYYEDPNRFVELVQIVKEELGLPI--MISP---GL--MDN-------ATLLKAREK 161 (350)
T ss_dssp HHHTTSCCSEEEEE-----ECCCHHHHHSTHHHHHHHHHHHHHHCSCE--EEEC---SS--CCH-------HHHHHHHHT
T ss_pred HHHHHCCCCEEEEe-----eCCCCccccCHHHHHHHHHHHHhhcCceE--EEeC---CC--CCH-------HHHHHHHHc
Confidence 34456789988874 6777853 46666666555554 5666 21 222 446667788
Q ss_pred CCCEEEEeeecCC--------CCcCHHHHHHHHHHhC--CCCeEEeecccC
Q psy7930 95 GADGFVIGALTGE--------QEIDIEFIRQLKTIIG--DRPITFHRAFDV 135 (146)
Q Consensus 95 GadG~VfG~L~~d--------g~iD~~~~~~Li~~a~--~~~vtFHRAFD~ 135 (146)
|++.+-+|+=+.+ ...+.+...+.++.++ |++++.+.-|-.
T Consensus 162 G~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Gl 212 (350)
T 3t7v_A 162 GANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGV 212 (350)
T ss_dssp TEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESS
T ss_pred CCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeec
Confidence 8888887754432 1345555555555554 677777665544
No 306
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=79.54 E-value=6.8 Score=33.27 Aligned_cols=79 Identities=15% Similarity=0.061 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCCC------CHHHHHHHHhhCC-CcEEEEEccCCCCCc-
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLTP------TLGLYRVIKRLVL-VPVFVMIRVRAGFDF- 74 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlTP------S~g~i~~~~~~~~-ipv~vMIRP~R~gdF- 74 (146)
+.|..|+++|.|-|||..+= .-||- . ...+++.+++.++ .||-|=|+| +++
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGs-lenR~rf~~Eiv~aVr~avg~~~V~vRls~---~~~~ 250 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-LANRCKFITQVVQAVVSAIGADRVGVRVSP---AIDH 250 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECS---SCCS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcC-hhhhhHHHHHHHHHHHHHhCCCcEEEEecc---cccc
Confidence 67788999999999998631 11342 2 2457777777774 477665556 322
Q ss_pred c--cCHHHHHHHHHHHHHHHHcC------CCEEEEe
Q psy7930 75 V--FSQAEKEIMALDCHQFVESG------ADGFVIG 102 (146)
Q Consensus 75 ~--Ys~~E~~~M~~dI~~~~~~G------adG~VfG 102 (146)
. -.....+...+=++.+.+.| +|.+.+-
T Consensus 251 ~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 251 LDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp TTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 1 12223444555667778889 9988873
No 307
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=79.44 E-value=2.7 Score=33.72 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=53.1
Q ss_pred HHHHHHHHcCCCEEEecCCCCC---CCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcc---cCHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSE---GGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFV---FSQAEKEIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~---GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~---Ys~~E~~~M~~dI~~~~ 92 (146)
.++..|.+.|||-|...=|+.. |-..--...++.+++.+ +.|+-|||-+ .+. .+++|+.... +.+.
T Consensus 84 ~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt----~~L~~~~t~eei~~a~---~ia~ 156 (231)
T 3ndo_A 84 TEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVES----AALLEFSGEPLLADVC---RVAR 156 (231)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCH----HHHHHHTCHHHHHHHH---HHHH
T ss_pred HHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEEC----cccCCCCCHHHHHHHH---HHHH
Confidence 5788899999999999977543 44444556677777776 5788888766 244 4777766544 5778
Q ss_pred HcCCCEEE
Q psy7930 93 ESGADGFV 100 (146)
Q Consensus 93 ~~GadG~V 100 (146)
++|||-|=
T Consensus 157 ~aGADfVK 164 (231)
T 3ndo_A 157 DAGADFVK 164 (231)
T ss_dssp HTTCSEEE
T ss_pred HHCcCEEE
Confidence 89999664
No 308
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=79.41 E-value=2.8 Score=33.84 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCCEEEecCCCCC---CCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRGGADRLELCAALSE---GGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~---GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
..++..|.+.|||-|...=|+.. |-..--...++.+++.+ +.++-|+| + ++ | .+++|+... .+.+.++
T Consensus 98 v~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIl-E-t~--~-Lt~eei~~a---~~ia~~a 169 (239)
T 3ngj_A 98 AYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVII-E-CC--Y-LTNEEKVEV---CKRCVAA 169 (239)
T ss_dssp HHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEEC-C-GG--G-SCHHHHHHH---HHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEE-e-cC--C-CCHHHHHHH---HHHHHHH
Confidence 35788899999999999877532 43333445566666655 46777777 6 44 4 477765544 4567789
Q ss_pred CCCEEEE
Q psy7930 95 GADGFVI 101 (146)
Q Consensus 95 GadG~Vf 101 (146)
|||-|=.
T Consensus 170 GADfVKT 176 (239)
T 3ngj_A 170 GAEYVKT 176 (239)
T ss_dssp TCSEEEC
T ss_pred CcCEEEC
Confidence 9996643
No 309
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=79.03 E-value=14 Score=28.92 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=69.9
Q ss_pred cCH-HHHHHHHHcCCCEEEecC-CCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSV-ASALAAVRGGADRLELCA-ALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~-~~a~~A~~~GAdRIELc~-~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.++ +-|..=.+.||+++-+.+ .-+..|-.+...+++.+.+.+.+|+.| ||+..= .+|++.+.++
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~~~~~~~~~i~~i~~~~~~pl~v------GGGIrs--------~e~~~~~l~~ 96 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKDPSKRQFALIEKLAKEVSVNLQV------GGGIRS--------KEEVKALLDC 96 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHCGGGCCHHHHHHHHHHCCSEEEE------ESSCCC--------HHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccccchhHHHHHHHHHHhcCCCeEe------cccccc--------HHHHHHHHHc
Confidence 344 345555778999999987 224578888999999999999999866 454431 3678889999
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEE
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtF 129 (146)
|||-+++|-.. --|.+.++++.+.-++-.++.
T Consensus 97 GadkVii~t~a---~~~p~li~e~~~~~g~q~iv~ 128 (243)
T 4gj1_A 97 GVKRVVIGSMA---IKDATLCLEILKEFGSEAIVL 128 (243)
T ss_dssp TCSEEEECTTT---TTCHHHHHHHHHHHCTTTEEE
T ss_pred CCCEEEEcccc---ccCCchHHHHHhcccCceEEE
Confidence 99999998432 346777778777776544443
No 310
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=78.73 E-value=16 Score=29.89 Aligned_cols=103 Identities=14% Similarity=0.074 Sum_probs=66.0
Q ss_pred HHHHHHHHcCCCEEEecCCC--------C--CCCCCCCHHHHHHHH---hhC-CCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAAL--------S--EGGLTPTLGLYRVIK---RLV-LVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l--------~--~GGlTPS~g~i~~~~---~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.+...+++||.=|-|=+.. . -..|+|--..+..++ +.. ..+..|+=|- -.+. ....++...
T Consensus 94 ~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRt---da~~-a~~g~~~ai 169 (290)
T 2hjp_A 94 YVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARV---EALI-AGLGQQEAV 169 (290)
T ss_dssp HHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEE---CTTT-TTCCHHHHH
T ss_pred HHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee---hHhh-ccccHHHHH
Confidence 44555677899988775543 2 234888755554444 432 3466666664 1121 011278899
Q ss_pred HHHHHHHHcCCCEEEEee-ecCCCCcCHHHHHHHHHHhC-CCCeEEee
Q psy7930 86 LDCHQFVESGADGFVIGA-LTGEQEIDIEFIRQLKTIIG-DRPITFHR 131 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~-L~~dg~iD~~~~~~Li~~a~-~~~vtFHR 131 (146)
++.+.+.++|||++++=+ + -|.+.++++.+..+ +.|+.+..
T Consensus 170 ~Ra~ay~eAGAd~i~~e~~~-----~~~~~~~~i~~~~~~~vP~i~n~ 212 (290)
T 2hjp_A 170 RRGQAYEEAGADAILIHSRQ-----KTPDEILAFVKSWPGKVPLVLVP 212 (290)
T ss_dssp HHHHHHHHTTCSEEEECCCC-----SSSHHHHHHHHHCCCSSCEEECG
T ss_pred HHHHHHHHcCCcEEEeCCCC-----CCHHHHHHHHHHcCCCCCEEEec
Confidence 999999999999999844 3 34556788887775 47877654
No 311
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=78.73 E-value=3.5 Score=34.81 Aligned_cols=73 Identities=19% Similarity=0.229 Sum_probs=45.5
Q ss_pred CHHHHHHHHH---cCCCEEEecC---CCCCCCCC----CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 18 SVASALAAVR---GGADRLELCA---ALSEGGLT----PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 18 s~~~a~~A~~---~GAdRIELc~---~l~~GGlT----PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+++.+..|.+ +||..|.|+. .....|-+ -....++.+++.+++||.| .- -|+++ |. ++
T Consensus 136 ~~~~~~~av~~~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPViv--K~-vG~g~--s~-------~~ 203 (368)
T 3vkj_A 136 GLKEFQDAIQMIEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIV--KE-SGNGI--SM-------ET 203 (368)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEE--EC-SSSCC--CH-------HH
T ss_pred CHHHHHHHHHHhcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEE--Ee-CCCCC--CH-------HH
Confidence 4566666443 4555555553 11123332 1467888888888899855 32 24444 32 57
Q ss_pred HHHHHHcCCCEEEEe
Q psy7930 88 CHQFVESGADGFVIG 102 (146)
Q Consensus 88 I~~~~~~GadG~VfG 102 (146)
++.+.++|+|+|+++
T Consensus 204 A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 204 AKLLYSYGIKNFDTS 218 (368)
T ss_dssp HHHHHHTTCCEEECC
T ss_pred HHHHHhCCCCEEEEe
Confidence 889999999999984
No 312
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=78.58 E-value=5.1 Score=31.21 Aligned_cols=64 Identities=16% Similarity=0.072 Sum_probs=42.2
Q ss_pred EecCHHH-HHHHHHcCCCEEEecCCCCCCCCCCCHH----HHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 15 CVDSVAS-ALAAVRGGADRLELCAALSEGGLTPTLG----LYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 15 cv~s~~~-a~~A~~~GAdRIELc~~l~~GGlTPS~g----~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
...+.++ ...|.+.|||=|||.-.+-.. ++.. +++.+++. ++|+.+-+|++..|+. ++++.-.+
T Consensus 8 ~~~~~~~~~~~~~~~~~D~vElRvD~l~~---~~~~~v~~~~~~lr~~-~~PiI~T~R~~~eGG~--~~~~~~~l 76 (219)
T 2egz_A 8 DDTNFSENLKKAKEKGADIVELRVDQFSD---TSLNYVKEKLEEVHSQ-GLKTILTIRSPEEGGR--EVKNREEL 76 (219)
T ss_dssp CSTTHHHHHHHHHHHTCSEEEEEGGGCSC---CCHHHHHHHHHHHHHT-TCEEEEECCCGGGTCC--CCTTHHHH
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEeccccc---cCHHHHHHHHHHHHhc-CCcEEEEEeehhccCC--CHHHHHHH
Confidence 3456776 455666799999999876532 3333 45555665 7999999998555655 55554443
No 313
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=78.53 E-value=3.9 Score=31.93 Aligned_cols=61 Identities=16% Similarity=0.221 Sum_probs=47.8
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFV 100 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V 100 (146)
+.....+...|-+|+-. |+ ....++++++.+++||. .|+|.=+.+ |+..+.++||++|+
T Consensus 119 ~~~~i~~~~PD~iEiLP-----Gi--~p~iI~~i~~~~~~PiI-------aGGlI~~~e-------dv~~al~aGA~aVs 177 (192)
T 3kts_A 119 GVALIQKVQPDCIELLP-----GI--IPEQVQKMTQKLHIPVI-------AGGLIETSE-------QVNQVIASGAIAVT 177 (192)
T ss_dssp HHHHHHHHCCSEEEEEC-----TT--CHHHHHHHHHHHCCCEE-------EESSCCSHH-------HHHHHHTTTEEEEE
T ss_pred HHHHHhhcCCCEEEECC-----ch--hHHHHHHHHHhcCCCEE-------EECCcCCHH-------HHHHHHHcCCeEEE
Confidence 55566677889999984 33 44899999999999985 455887754 56678899999999
Q ss_pred Ee
Q psy7930 101 IG 102 (146)
Q Consensus 101 fG 102 (146)
.|
T Consensus 178 Ts 179 (192)
T 3kts_A 178 TS 179 (192)
T ss_dssp EC
T ss_pred eC
Confidence 87
No 314
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=78.26 E-value=19 Score=29.60 Aligned_cols=111 Identities=15% Similarity=0.055 Sum_probs=70.6
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecC-CC-------CC-CCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccC
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCA-AL-------SE-GGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l-------~~-GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys 77 (146)
..+.=.++.+..+|..+.++|.|=| |.. ++ .- +.+|.. ....+.+.+..+.|..|.==| .|+|.-|
T Consensus 34 ~~i~~~tayDa~sA~l~e~aG~d~i-lvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~p--fgsy~~s 110 (281)
T 1oy0_A 34 HKWAMLTAYDYSTARIFDEAGIPVL-LVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLP--FGSYEAG 110 (281)
T ss_dssp CCEEEEECCSHHHHHHHHTTTCCEE-EECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECC--TTSSTTC
T ss_pred CcEEEEeCcCHHHHHHHHHcCCCEE-EECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECC--CCcccCC
Confidence 4677889999999999999999988 774 22 11 222222 234455556677787773346 5556545
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEe
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFH 130 (146)
.+ +.++.-++.+++.||+||=+ +||.-=.++++.++++ +.||.=|
T Consensus 111 ~~--~a~~na~rl~~eaGa~aVkl----Edg~e~~~~I~al~~a--gIpV~gH 155 (281)
T 1oy0_A 111 PT--AALAAATRFLKDGGAHAVKL----EGGERVAEQIACLTAA--GIPVMAH 155 (281)
T ss_dssp HH--HHHHHHHHHHHTTCCSEEEE----EBSGGGHHHHHHHHHH--TCCEEEE
T ss_pred HH--HHHHHHHHHHHHhCCeEEEE----CCcHHHHHHHHHHHHC--CCCEEee
Confidence 53 45566688888899998854 3443335556666553 4555433
No 315
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=78.19 E-value=5.7 Score=31.52 Aligned_cols=96 Identities=16% Similarity=0.144 Sum_probs=62.6
Q ss_pred cccceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 7 WNKTTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 7 ~~~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
|+...+== +.|++++.+|.+.|+|-|-+--+ +..+....++.++..+ ++|+ | | -|| -. .
T Consensus 111 ~~~~~~PG-~~TptE~~~A~~~Gad~vK~FPa----~~~gG~~~lkal~~p~p~i~~--~--p-tGG-I~--~------- 170 (217)
T 3lab_A 111 WQGVFLPG-VATASEVMIAAQAGITQLKCFPA----SAIGGAKLLKAWSGPFPDIQF--C--P-TGG-IS--K------- 170 (217)
T ss_dssp CCCEEEEE-ECSHHHHHHHHHTTCCEEEETTT----TTTTHHHHHHHHHTTCTTCEE--E--E-BSS-CC--T-------
T ss_pred CCCeEeCC-CCCHHHHHHHHHcCCCEEEECcc----ccccCHHHHHHHHhhhcCceE--E--E-eCC-CC--H-------
Confidence 44444443 48899999999999999976432 2222357888887755 3443 3 8 676 22 1
Q ss_pred HHHHHHHHcCCCEEEEee-ecCCC---CcCHHHHHHHHHHh
Q psy7930 86 LDCHQFVESGADGFVIGA-LTGEQ---EIDIEFIRQLKTII 122 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~-L~~dg---~iD~~~~~~Li~~a 122 (146)
+.+..+.++|+..+|.|- |++.. .=|.+.++++.+.+
T Consensus 171 ~N~~~~l~aGa~~~vgGs~l~~~~~i~~~~~~~i~~~a~~~ 211 (217)
T 3lab_A 171 DNYKEYLGLPNVICAGGSWLTESKLLIEGDWNEVTRRASEI 211 (217)
T ss_dssp TTHHHHHHSTTBCCEEESGGGCHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHCCCEEEEEChhhcChhHHhcCCHHHHHHHHHHH
Confidence 457888999998888875 44321 12667777766654
No 316
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=78.00 E-value=4.2 Score=31.42 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=43.5
Q ss_pred CCCCHHHHHHHHhhCCCcEEE-EEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 44 LTPTLGLYRVIKRLVLVPVFV-MIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 44 lTPS~g~i~~~~~~~~ipv~v-MIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
..||+..++.+++.+++||-. =+-|-..|-| |. |+ .+..++++|||++.+|.= +..++.+.++++++.|
T Consensus 38 ~~~~~~~l~~v~~~~~~~v~aqd~~~~~~ga~--tG-ei-----~~~~~~~~Gad~Vll~~s--er~l~~~e~~~~~~~a 107 (219)
T 2h6r_A 38 VAPQFVDLRMIVENVNIPVYAQHIDNINPGSH--TG-HI-----LAEAIKDCGCKGTLINHS--EKRMLLADIEAVINKC 107 (219)
T ss_dssp EECCTTTHHHHHHHCCSCBEESCCCSCCSBSC--TT-CC-----CHHHHHHHTCCEEEESBT--TBCCBHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHcCCcEEEEECChhhcCCc--cC-ch-----HHHHHHHcCCCEEEECCc--cccCCHHHHHHHHHHH
Confidence 557888888888888999833 1112011222 11 11 137889999999999852 2234444578888777
Q ss_pred C
Q psy7930 123 G 123 (146)
Q Consensus 123 ~ 123 (146)
+
T Consensus 108 ~ 108 (219)
T 2h6r_A 108 K 108 (219)
T ss_dssp H
T ss_pred H
Confidence 5
No 317
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=77.77 E-value=5.2 Score=32.17 Aligned_cols=46 Identities=20% Similarity=0.223 Sum_probs=34.6
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhCCCcEEEEEc
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLVLVPVFVMIR 67 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~~ipv~vMIR 67 (146)
+.+.+..+.+.|+|-||+=. ..|.|. ...+++.+++ .++|+..|.-
T Consensus 25 ~~~~l~~~~~~GtDaI~vGg---s~gvt~~~~~~~v~~ik~-~~~Piil~p~ 72 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGG---TDDVTEDNVIHLMSKIRR-YPLPLVLEIS 72 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECC---SSCCCHHHHHHHHHHHTT-SCSCEEEECC
T ss_pred CHHHHHHHHHcCCCEEEECC---cCCcCHHHHHHHHHHhcC-cCCCEEEecC
Confidence 45666778899999999865 245566 4678888888 8999977653
No 318
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=77.69 E-value=12 Score=29.08 Aligned_cols=102 Identities=14% Similarity=-0.020 Sum_probs=52.2
Q ss_pred HHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEE--EccCCC--CCcc--cCHHHHHHHHHHHHHHHHcCC
Q psy7930 23 LAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVM--IRVRAG--FDFV--FSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 23 ~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vM--IRP~R~--gdF~--Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
..+.++|..++=.++ ..|.+.+...+.++.+..++.|+.. +-| .. .++. .+.+++. +.+..-+..|+
T Consensus 54 ~~~~~~Gv~~iv~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~G~hp-~~~~~~~~~~~~~~~l~---~~~~~~~~~gi 126 (314)
T 2vc7_A 54 KRAMQFGVKTIVDPT---VMGLGRDIRFMEKVVKATGINLVAGTGIYI-YIDLPFYFLNRSIDEIA---DLFIHDIKEGI 126 (314)
T ss_dssp HHHHHTTCCEEEECC---CBTTTCCHHHHHHHHHHHCCEEEECEEBCC-SSCCCGGGTTCCHHHHH---HHHHHHHHTCS
T ss_pred HHHHHcCCCEEEecC---CCCCCcCHHHHHHHHHHcCCeEEEEeecCC-CCCCchhhhccCHHHHH---HHHHHHHHhhc
Confidence 567789999985554 2344455666655555555445433 334 22 1121 1233443 33322223344
Q ss_pred C--EEEEee----ecCCC--CcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 97 D--GFVIGA----LTGEQ--EIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 97 d--G~VfG~----L~~dg--~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
. |+-.|+ |+..+ ....+.++..+++|+ ++|+.+|-
T Consensus 127 ge~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~ 171 (314)
T 2vc7_A 127 QGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHS 171 (314)
T ss_dssp SSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeC
Confidence 3 333333 44332 123345666777775 89999996
No 319
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=77.64 E-value=1.4 Score=45.07 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=66.5
Q ss_pred EEecCHHHHHHH----HHcCCCEEEe--cCCCCCCCC-------CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHH
Q psy7930 14 VCVDSVASALAA----VRGGADRLEL--CAALSEGGL-------TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 14 vcv~s~~~a~~A----~~~GAdRIEL--c~~l~~GGl-------TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
..+.+..++..+ ++.|+|-|=. +.+...||- .|...++.++++..+|||.+ +|++...
T Consensus 697 ~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipvia------aGGI~~g--- 767 (2060)
T 2uva_G 697 SFKPGSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVA------GSGFGGS--- 767 (2060)
T ss_dssp EECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEE------ESSCCSH---
T ss_pred EecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEE------eCCCCCH---
Confidence 456777888888 8999998862 223445554 34577888888888888654 4556544
Q ss_pred HHHHHHHHHHHH-----------HcCCCEEEEee---ecCCCCcCHHHHHHHHHHhCCCC
Q psy7930 81 KEIMALDCHQFV-----------ESGADGFVIGA---LTGEQEIDIEFIRQLKTIIGDRP 126 (146)
Q Consensus 81 ~~~M~~dI~~~~-----------~~GadG~VfG~---L~~dg~iD~~~~~~Li~~a~~~~ 126 (146)
+|+..+. .+|||||.+|= .+.+-...... |+.+-.|++-.
T Consensus 768 -----~~i~aaltg~ws~~~g~palGAdgV~~GT~f~~t~Ea~~s~~~-K~~lv~a~~~d 821 (2060)
T 2uva_G 768 -----EDTYPYLTGSWSTKFGYPPMPFDGCMFGSRMMTAKEAHTSKQA-KQAIVDAPGVD 821 (2060)
T ss_dssp -----HHHHHHHHTCGGGTTTSCCCCCSCEEESGGGGGBTTSCCCHHH-HHHHHTSCCCC
T ss_pred -----HHHHHHhcCcchhhcCCCCCCCCEEEEchhhhcCcCCCCCHHH-HHHHHhCCccc
Confidence 5777888 89999999994 45565666554 44444455433
No 320
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=77.56 E-value=6.1 Score=34.27 Aligned_cols=36 Identities=28% Similarity=0.458 Sum_probs=25.3
Q ss_pred CCc-EEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 59 LVP-VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 59 ~ip-v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
++| |.|=|+| - ++++|+. +=.+.+.+.|+|||++--
T Consensus 296 ~~P~V~vKisp-d-----~~~ed~~---~iA~~~~~aGaDgI~v~n 332 (443)
T 1tv5_A 296 KKPLVFVKLAP-D-----LNQEQKK---EIADVLLETNIDGMIISN 332 (443)
T ss_dssp SCCEEEEEECS-C-----CCHHHHH---HHHHHHHHTTCSEEEECC
T ss_pred CCCeEEEEeCC-C-----CCHHHHH---HHHHHHHHcCCCEEEEEC
Confidence 578 8888888 2 3554443 335677889999998754
No 321
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=77.45 E-value=6.9 Score=37.74 Aligned_cols=66 Identities=23% Similarity=0.233 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+-+..+.+.||++|-||+- .|.+||. ..+++.+++.+++||++.--- ..|- . ..-...+.++|||
T Consensus 696 ~~a~~~~~~Ga~~i~l~Dt--~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn-t~G~--------a--~An~laA~~aGa~ 762 (1150)
T 3hbl_A 696 KLAKELEREGFHILAIKDM--AGLLKPKAAYELIGELKSAVDLPIHLHTHD-TSGN--------G--LLTYKQAIDAGVD 762 (1150)
T ss_dssp HHHHHHHHTTCSEEEEEET--TCCCCHHHHHHHHHHHHHHCCSCEEEEECB-TTSC--------H--HHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCeeeEcCc--cCCCCHHHHHHHHHHHHHhcCCeEEEEeCC-CCcH--------H--HHHHHHHHHhCCC
Confidence 4567788999999999994 7999995 678899999889999887665 3331 1 1334556678887
Q ss_pred E
Q psy7930 98 G 98 (146)
Q Consensus 98 G 98 (146)
-
T Consensus 763 ~ 763 (1150)
T 3hbl_A 763 I 763 (1150)
T ss_dssp E
T ss_pred E
Confidence 4
No 322
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=77.27 E-value=7.1 Score=32.49 Aligned_cols=66 Identities=14% Similarity=0.171 Sum_probs=43.5
Q ss_pred HHHHHHHHHc--CCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRG--GADRLELCAALSEGGLTP-TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~--GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.+.+....+. |++-+++-.+ . |.++ ....++.+++.. ++||.+ . .+-|. +|.+.+.++
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~--~-g~~~~~~~~i~~lr~~~~~~~vi~--g------~v~t~-------e~A~~a~~a 181 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVA--N-GYSEHFVEFVKDVRKRFPQHTIMA--G------NVVTG-------EMVEELILS 181 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECS--C-TTBHHHHHHHHHHHHHCTTSEEEE--E------EECSH-------HHHHHHHHT
T ss_pred HHHHHHHHhccCCCCEEEEEec--C-CCcHHHHHHHHHHHHhcCCCeEEE--E------eCCCH-------HHHHHHHHh
Confidence 4455556666 9999887432 2 3332 345788888877 788753 1 23332 567788999
Q ss_pred CCCEEEEe
Q psy7930 95 GADGFVIG 102 (146)
Q Consensus 95 GadG~VfG 102 (146)
|+|+|++|
T Consensus 182 GaD~I~v~ 189 (351)
T 2c6q_A 182 GADIIKVG 189 (351)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999887
No 323
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=76.96 E-value=2.2 Score=34.98 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=44.3
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+..+.+.||++|=||+. .|.+||. ..+++.+++.+ ++|+.+---- ..| +. ..-...+.++||+-
T Consensus 163 ~~~~~~~Ga~~i~l~DT--~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hn-d~G--------la--~AN~laAv~aGa~~ 229 (307)
T 1ydo_A 163 SEALFEFGISELSLGDT--IGAANPAQVETVLEALLARFPANQIALHFHD-TRG--------TA--LANMVTALQMGITV 229 (307)
T ss_dssp HHHHHHHTCSCEEEECS--SCCCCHHHHHHHHHHHHTTSCGGGEEEECBG-GGS--------CH--HHHHHHHHHHTCCE
T ss_pred HHHHHhcCCCEEEEcCC--CCCcCHHHHHHHHHHHHHhCCCCeEEEEECC-CCc--------hH--HHHHHHHHHhCCCE
Confidence 55577889999999984 7899994 67888888877 4777665433 112 11 23444556678864
Q ss_pred E
Q psy7930 99 F 99 (146)
Q Consensus 99 ~ 99 (146)
|
T Consensus 230 v 230 (307)
T 1ydo_A 230 F 230 (307)
T ss_dssp E
T ss_pred E
Confidence 4
No 324
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=76.88 E-value=20 Score=27.88 Aligned_cols=82 Identities=17% Similarity=0.182 Sum_probs=53.7
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+.+++..|.+.|||-+ ..|+++ ..+++.+++ .++|+. | | +.|..|+. .+.++|+|
T Consensus 78 ~~d~~~~A~~aGAd~v------~~p~~d--~~v~~~ar~-~g~~~i----~---G--v~t~~e~~-------~A~~~Gad 132 (224)
T 1vhc_A 78 TAEQVVLAKSSGADFV------VTPGLN--PKIVKLCQD-LNFPIT----P---G--VNNPMAIE-------IALEMGIS 132 (224)
T ss_dssp SHHHHHHHHHHTCSEE------ECSSCC--HHHHHHHHH-TTCCEE----C---E--ECSHHHHH-------HHHHTTCC
T ss_pred eHHHHHHHHHCCCCEE------EECCCC--HHHHHHHHH-hCCCEE----e---c--cCCHHHHH-------HHHHCCCC
Confidence 6799999999999999 235554 455677777 777763 3 3 77877753 36688999
Q ss_pred EEEEeeecCCCCc-CHHHHHHHHHHhCCCCe
Q psy7930 98 GFVIGALTGEQEI-DIEFIRQLKTIIGDRPI 127 (146)
Q Consensus 98 G~VfG~L~~dg~i-D~~~~~~Li~~a~~~~v 127 (146)
-+-| -+...+ -.+.++++.....++|+
T Consensus 133 ~vk~---Fpa~~~gG~~~lk~l~~~~~~ipv 160 (224)
T 1vhc_A 133 AVKF---FPAEASGGVKMIKALLGPYAQLQI 160 (224)
T ss_dssp EEEE---TTTTTTTHHHHHHHHHTTTTTCEE
T ss_pred EEEE---eeCccccCHHHHHHHHhhCCCCeE
Confidence 8766 232223 35666666555544443
No 325
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=76.88 E-value=14 Score=29.96 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=51.9
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+.+..+.+.|+|-|++... .| ..+++.+++ .++||.+-+- +. ++++.+.+.|+|+|
T Consensus 79 ~~~~~a~~~g~d~V~~~~g------~p-~~~i~~l~~-~g~~v~~~v~---------~~-------~~a~~~~~~GaD~i 134 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAG------NP-SKYMERFHE-AGIIVIPVVP---------SV-------ALAKRMEKIGADAV 134 (332)
T ss_dssp HHHHHHHHTTCSEEEECSS------CG-GGTHHHHHH-TTCEEEEEES---------SH-------HHHHHHHHTTCSCE
T ss_pred HHHHHHHHCCCCEEEECCC------Ch-HHHHHHHHH-cCCeEEEEeC---------CH-------HHHHHHHHcCCCEE
Confidence 4577889999999998753 23 456777766 4777765441 22 34556778999999
Q ss_pred EE-eeecCCC----CcCHHHHHHHHHHhCCCCe
Q psy7930 100 VI-GALTGEQ----EIDIEFIRQLKTIIGDRPI 127 (146)
Q Consensus 100 Vf-G~L~~dg----~iD~~~~~~Li~~a~~~~v 127 (146)
++ |. ...| ..+.+.++++.+.. +.|+
T Consensus 135 ~v~g~-~~GG~~g~~~~~~ll~~i~~~~-~iPV 165 (332)
T 2z6i_A 135 IAEGM-EAGGHIGKLTTMTLVRQVATAI-SIPV 165 (332)
T ss_dssp EEECT-TSSEECCSSCHHHHHHHHHHHC-SSCE
T ss_pred EEECC-CCCCCCCCccHHHHHHHHHHhc-CCCE
Confidence 99 54 2221 34566666665543 3444
No 326
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=76.78 E-value=18 Score=29.72 Aligned_cols=82 Identities=21% Similarity=0.257 Sum_probs=51.2
Q ss_pred HHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEE--ccCCC----CCccc---CHHHHHHHHHHHHHHHHcCC
Q psy7930 26 VRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMI--RVRAG----FDFVF---SQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 26 ~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMI--RP~R~----gdF~Y---s~~E~~~M~~dI~~~~~~Ga 96 (146)
+++||+=|-|=. | .--...|+.+.+ .+|||+--| -| +. |+|.- ++ +.+.+.+|.+.+.++||
T Consensus 123 ~eaGa~aVklEd-----g-~e~~~~I~al~~-agIpV~gHiGLtP-qsv~~~ggf~v~grt~-~a~~~i~rA~a~~eAGA 193 (281)
T 1oy0_A 123 KDGGAHAVKLEG-----G-ERVAEQIACLTA-AGIPVMAHIGFTP-QSVNTLGGFRVQGRGD-AAEQTIADAIAVAEAGA 193 (281)
T ss_dssp HTTCCSEEEEEB-----S-GGGHHHHHHHHH-HTCCEEEEEECCC---------------CH-HHHHHHHHHHHHHHHTC
T ss_pred HHhCCeEEEECC-----c-HHHHHHHHHHHH-CCCCEEeeecCCc-ceecccCCeEEEeCcH-HHHHHHHHHHHHHHcCC
Confidence 348999887753 3 223555655544 479975444 45 22 45632 45 77999999999999999
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
+++|+=++.+ +..+++.+..
T Consensus 194 ~~ivlE~vp~------~~a~~it~~l 213 (281)
T 1oy0_A 194 FAVVMEMVPA------ELATQITGKL 213 (281)
T ss_dssp SEEEEESCCH------HHHHHHHHHC
T ss_pred cEEEEecCCH------HHHHHHHHhC
Confidence 9999977542 3455555544
No 327
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=76.57 E-value=2.5 Score=37.77 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=48.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+-+..+.+.||++|=||+ ..|++||. ..+++.+++.+ ++||.+---- ..| +. ..-...+.++|
T Consensus 179 ~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hn-d~G--------lA--vAN~laAveAG 245 (539)
T 1rqb_A 179 KLAGQLLDMGADSIALKD--MAALLKPQPAYDIIKAIKDTYGQKTQINLHCHS-TTG--------VT--EVSLMKAIEAG 245 (539)
T ss_dssp HHHHHHHHTTCSEEEEEE--TTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBC-TTS--------CH--HHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEeCC--CCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCC-CCC--------hH--HHHHHHHHHhC
Confidence 346668889999999998 47999995 67889998888 7888776554 333 12 24455667789
Q ss_pred CCEE
Q psy7930 96 ADGF 99 (146)
Q Consensus 96 adG~ 99 (146)
|+-|
T Consensus 246 a~~V 249 (539)
T 1rqb_A 246 VDVV 249 (539)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9743
No 328
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=76.47 E-value=25 Score=27.35 Aligned_cols=72 Identities=15% Similarity=0.096 Sum_probs=45.3
Q ss_pred HHHHHHHHcCCCEEEec--CCCCCCCCCCCHHHHHHHHhh--CCCc--EEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELC--AALSEGGLTPTLGLYRVIKRL--VLVP--VFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc--~~l~~GGlTPS~g~i~~~~~~--~~ip--v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+++..+.++|||.+.+= ...-+=-+|=...+++++++. .++| +|.||-. .++ -++.+.+
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~--p~~-------------~i~~~~~ 85 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSK--PEQ-------------WVKPMAV 85 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSC--GGG-------------GHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCC--HHH-------------HHHHHHH
Confidence 45566778999988772 211111133356789999988 4666 6678764 222 2455677
Q ss_pred cCCCEEEEeeecC
Q psy7930 94 SGADGFVIGALTG 106 (146)
Q Consensus 94 ~GadG~VfG~L~~ 106 (146)
+|+|.+.|..-..
T Consensus 86 aGad~itvH~Ea~ 98 (228)
T 3ovp_A 86 AGANQYTFHLEAT 98 (228)
T ss_dssp HTCSEEEEEGGGC
T ss_pred cCCCEEEEccCCc
Confidence 8888888876443
No 329
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=76.44 E-value=4.1 Score=35.36 Aligned_cols=67 Identities=18% Similarity=0.263 Sum_probs=48.2
Q ss_pred HHHHHHcCCCEEEecCCC-----------CCCCCCC------CHHHHHHHHhhC--CCcEEEEEccCCCCCcccCHHHHH
Q psy7930 22 ALAAVRGGADRLELCAAL-----------SEGGLTP------TLGLYRVIKRLV--LVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l-----------~~GGlTP------S~g~i~~~~~~~--~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
|..+++.|+|-|-+-... ..||++- +..+++++++.+ ++||... || ..|.+
T Consensus 317 A~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~-----GG--I~s~~--- 386 (443)
T 1tv5_A 317 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS-----GG--IFSGL--- 386 (443)
T ss_dssp HHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE-----SS--CCSHH---
T ss_pred HHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE-----CC--CCCHH---
Confidence 788899999999887642 2366642 467888999988 8998654 44 33443
Q ss_pred HHHHHHHHHHHcCCCEEEEe
Q psy7930 83 IMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG 102 (146)
|+..+..+|||+|-+|
T Consensus 387 ----DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 387 ----DALEKIEAGASVCQLY 402 (443)
T ss_dssp ----HHHHHHHTTEEEEEES
T ss_pred ----HHHHHHHcCCCEEEEc
Confidence 4455556899999987
No 330
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=76.35 E-value=7.2 Score=33.40 Aligned_cols=103 Identities=13% Similarity=0.118 Sum_probs=62.9
Q ss_pred HHHHHHHHcCCCEEEecCCC-----------------CCCCCC------CCHHHHHHHHhhC------CCcEEEEEccCC
Q psy7930 20 ASALAAVRGGADRLELCAAL-----------------SEGGLT------PTLGLYRVIKRLV------LVPVFVMIRVRA 70 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l-----------------~~GGlT------PS~g~i~~~~~~~------~ipv~vMIRP~R 70 (146)
+.|..|+++|.|-|||..+- .-||-. =...+++++++.+ +.||-|=|+|
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~-- 251 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATP-- 251 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECS--
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccc--
Confidence 56788999999999997531 125533 1356777777765 4566655555
Q ss_pred CCCc-----ccCHHHHHHHHHHHHHHHH-cCCCEEEEeeecC---------CCC-cCHHHHHHHHHHhC-CCCeE
Q psy7930 71 GFDF-----VFSQAEKEIMALDCHQFVE-SGADGFVIGALTG---------EQE-IDIEFIRQLKTIIG-DRPIT 128 (146)
Q Consensus 71 ~gdF-----~Ys~~E~~~M~~dI~~~~~-~GadG~VfG~L~~---------dg~-iD~~~~~~Li~~a~-~~~vt 128 (146)
.+| -++.+|. .+=++.+.+ .|+|.+-+-.-+. .+. .+.+..+.+.+..+ .+|+.
T Consensus 252 -~~~~~~~~G~~~ed~---~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI 322 (419)
T 3l5a_A 252 -EETRGSDLGYTIDEF---NQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLI 322 (419)
T ss_dssp -CEEETTEEEECHHHH---HHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEE
T ss_pred -ccccCCCCCCCHHHH---HHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEE
Confidence 333 2445543 444667778 9999988765332 122 34456667776665 35554
No 331
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=76.09 E-value=33 Score=28.53 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=67.3
Q ss_pred HHHHHHHHcCCCEEEecCC--------CCCCCCCCCHHHHHHHH---hhC-CCcEEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAA--------LSEGGLTPTLGLYRVIK---RLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~--------l~~GGlTPS~g~i~~~~---~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
+.+...+++||.=|-|=+. +.-..|+|--..+..++ +.. ..+..|+=|- -.+ ....++...++
T Consensus 120 ~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt---da~--a~~gl~~ai~R 194 (318)
T 1zlp_A 120 RFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART---DAR--APHGLEEGIRR 194 (318)
T ss_dssp HHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE---CTH--HHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee---HHh--hhcCHHHHHHH
Confidence 4556667889998877443 33334888766654444 332 3566666665 223 24557899999
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEe
Q psy7930 88 CHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFH 130 (146)
.+.+.++|||++++=++ -|.+..+++.+..+ .|+.+.
T Consensus 195 a~Ay~eAGAd~i~~e~~-----~~~e~~~~i~~~l~-~P~lan 231 (318)
T 1zlp_A 195 ANLYKEAGADATFVEAP-----ANVDELKEVSAKTK-GLRIAN 231 (318)
T ss_dssp HHHHHHTTCSEEEECCC-----CSHHHHHHHHHHSC-SEEEEE
T ss_pred HHHHHHcCCCEEEEcCC-----CCHHHHHHHHHhcC-CCEEEE
Confidence 99999999999998554 36778888888775 666444
No 332
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=76.08 E-value=4.8 Score=37.81 Aligned_cols=70 Identities=30% Similarity=0.352 Sum_probs=47.6
Q ss_pred HHHHHHHHcCCCEEEecCC----------------------CCCCCCCCC------HHHHHHHHhhC-CCcEEEEEccCC
Q psy7930 20 ASALAAVRGGADRLELCAA----------------------LSEGGLTPT------LGLYRVIKRLV-LVPVFVMIRVRA 70 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~----------------------l~~GGlTPS------~g~i~~~~~~~-~ipv~vMIRP~R 70 (146)
+-+..++++|+|-|.+-.. -..||++.. ...++++++.+ ++||...
T Consensus 719 ~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~----- 793 (1025)
T 1gte_A 719 SIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILAT----- 793 (1025)
T ss_dssp HHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEE-----
T ss_pred HHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEe-----
Confidence 3488899999999999421 133555432 35788888888 8998653
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
|| ..|. +|+..+..+|||+|.+|-
T Consensus 794 GG--I~s~-------~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 794 GG--IDSA-------ESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp SS--CCSH-------HHHHHHHHTTCSEEEESH
T ss_pred cC--cCCH-------HHHHHHHHcCCCEEEEee
Confidence 55 3344 344555568999999984
No 333
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=76.07 E-value=8.7 Score=30.88 Aligned_cols=66 Identities=32% Similarity=0.370 Sum_probs=36.9
Q ss_pred HHHHHHHHHcCCCEEEecCC-CCCCCCCC-----CHHHHHHHHhhCCCcEEEEEccCCCCCcccC-HHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAA-LSEGGLTP-----TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFS-QAEKEIMALDCHQF 91 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~-l~~GGlTP-----S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys-~~E~~~M~~dI~~~ 91 (146)
.+.+....+.+...+ .|.. ...-|.+. -..+++.+++..++||.| | |-.+ .+ +++.+
T Consensus 157 ~eri~~ia~~~~gfi-y~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~v------G--fGI~t~e-------~a~~~ 220 (271)
T 1ujp_A 157 DARIATVVRHATGFV-YAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAV------G--FGVSGKA-------TAAQA 220 (271)
T ss_dssp HHHHHHHHTTCCSCE-EEECC------------CCHHHHHHHHTTCCSCEEE------E--SCCCSHH-------HHHHH
T ss_pred HHHHHHHHHhCCCCE-EEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEE------E--cCCCCHH-------HHHHh
Confidence 454455555555555 4432 22223322 257999999988999865 2 2232 43 44444
Q ss_pred HHcCCCEEEEe
Q psy7930 92 VESGADGFVIG 102 (146)
Q Consensus 92 ~~~GadG~VfG 102 (146)
.||||+|+|
T Consensus 221 --~~ADgVIVG 229 (271)
T 1ujp_A 221 --AVADGVVVG 229 (271)
T ss_dssp --TTSSEEEEC
T ss_pred --cCCCEEEEC
Confidence 799999999
No 334
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=75.72 E-value=29 Score=27.87 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=49.2
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+.+..+.+.|++.|.+-. |. | ..+++.+++. ++||.+.+. |.+ +.+.+.+.|+|+|
T Consensus 87 ~~~~~~~~~g~d~V~~~~-----g~-p-~~~~~~l~~~-gi~vi~~v~---------t~~-------~a~~~~~~GaD~i 142 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAG-----ND-P-GEHIAEFRRH-GVKVIHKCT---------AVR-------HALKAERLGVDAV 142 (328)
T ss_dssp HHHHHHHHTTCCEEEEEE-----SC-C-HHHHHHHHHT-TCEEEEEES---------SHH-------HHHHHHHTTCSEE
T ss_pred HHHHHHHhcCCCEEEEcC-----CC-c-HHHHHHHHHc-CCCEEeeCC---------CHH-------HHHHHHHcCCCEE
Confidence 667788899999999763 32 4 6778877765 778764432 332 3456778999999
Q ss_pred EE-eeecCC---CC---cCHHHHHHHHH
Q psy7930 100 VI-GALTGE---QE---IDIEFIRQLKT 120 (146)
Q Consensus 100 Vf-G~L~~d---g~---iD~~~~~~Li~ 120 (146)
++ |. +.. |. .+.+.++++.+
T Consensus 143 ~v~g~-~~GG~~G~~~~~~~~~l~~v~~ 169 (328)
T 2gjl_A 143 SIDGF-ECAGHPGEDDIPGLVLLPAAAN 169 (328)
T ss_dssp EEECT-TCSBCCCSSCCCHHHHHHHHHT
T ss_pred EEECC-CCCcCCCCccccHHHHHHHHHH
Confidence 98 43 222 22 45555555544
No 335
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=75.71 E-value=2.2 Score=34.46 Aligned_cols=74 Identities=20% Similarity=0.328 Sum_probs=49.9
Q ss_pred cceeEEEecCHHHHHHH----HHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 9 KTTLEVCVDSVASALAA----VRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A----~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
++++|.|--+.+....| .++|||-|--......||.|+ ...+++++. +-++- |-+ -|| - =|.+
T Consensus 146 KVIlEt~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~v---g~~v~--VKa-sGG-I-rt~~---- 213 (239)
T 3ngj_A 146 KVIIECCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTV---GDKAL--VKA-AGG-I-RTFD---- 213 (239)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHH---GGGSE--EEE-ESS-C-CSHH----
T ss_pred EEEEecCCCCHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhh---CCCce--EEE-eCC-C-CCHH----
Confidence 56789998888777766 889999999999988899887 345555443 33332 334 454 2 1333
Q ss_pred HHHHHHHHHHcCCC
Q psy7930 84 MALDCHQFVESGAD 97 (146)
Q Consensus 84 M~~dI~~~~~~Gad 97 (146)
|...+.++||+
T Consensus 214 ---da~~~i~aGA~ 224 (239)
T 3ngj_A 214 ---DAMKMINNGAS 224 (239)
T ss_dssp ---HHHHHHHTTEE
T ss_pred ---HHHHHHHhccc
Confidence 44445588998
No 336
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=75.66 E-value=33 Score=28.32 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=63.0
Q ss_pred HHHHHHHHcCCCEEEec----------CCCC-CCCCCCCHHHHHHHHhhC-CCcEEEEEccCC----CCCc----c-cCH
Q psy7930 20 ASALAAVRGGADRLELC----------AALS-EGGLTPTLGLYRVIKRLV-LVPVFVMIRVRA----GFDF----V-FSQ 78 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc----------~~l~-~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R----~gdF----~-Ys~ 78 (146)
++.....+.|++-|-|. ..+. .+|-||+..-+..+.+.+ ..-+.||+.| . .|.+ . +++
T Consensus 57 ~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p-~i~~~~g~w~g~i~~~~~ 135 (343)
T 3civ_A 57 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKP-TVNCRDGTWRGEIRFEKE 135 (343)
T ss_dssp HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEE-EEEETTCCCGGGCCCSBS
T ss_pred HHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE-EeeccCCcccccccccCc
Confidence 34445566999999984 2221 346678887666655443 2334445544 2 1222 1 221
Q ss_pred ------------HHHHHHHHHHHH-HHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEe
Q psy7930 79 ------------AEKEIMALDCHQ-FVESGADGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFH 130 (146)
Q Consensus 79 ------------~E~~~M~~dI~~-~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFH 130 (146)
...+.+..-+.. +...+++.+++|.=...++-..+.+++|++.++ +-++|++
T Consensus 136 ~~~~~~~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~~~~~~~~~~Li~~vR~~~~g~VTya 203 (343)
T 3civ_A 136 HGPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARVRTEYDGLVTYN 203 (343)
T ss_dssp CCTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCCCchHHHHHHHHHHHHhhCCCCEEEE
Confidence 122222222222 345689999999744444446778889988886 4499996
No 337
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=75.58 E-value=9.9 Score=31.07 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCC---CCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGG---LTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GG---lTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+=+...++.|+|-|++-..-..+. ..| ...+++.+++.+++||.+ .|++ +|.++. ..+.+.
T Consensus 233 ~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~Ggi-~s~~~a-------~~~l~~ 298 (338)
T 1z41_A 233 GFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGA------VGMI-TDGSMA-------EEILQN 298 (338)
T ss_dssp HHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEE------CSSC-CSHHHH-------HHHHHT
T ss_pred HHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEE------ECCC-CCHHHH-------HHHHHc
Confidence 335667789999999975321111 112 367888999988999753 3333 344444 445566
Q ss_pred C-CCEEEEe
Q psy7930 95 G-ADGFVIG 102 (146)
Q Consensus 95 G-adG~VfG 102 (146)
| ||+|.||
T Consensus 299 G~aD~V~iG 307 (338)
T 1z41_A 299 GRADLIFIG 307 (338)
T ss_dssp TSCSEEEEC
T ss_pred CCceEEeec
Confidence 7 9999999
No 338
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=75.26 E-value=15 Score=29.65 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=60.6
Q ss_pred eEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 12 LEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 12 lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
+=+-..+++.+..|...|+|-|=|- ++-+ .-....+....+.. .-+..++||. -..|- .||+.
T Consensus 43 l~~~~~~p~~~e~a~~~GaD~v~lD--lEh~--~~~~~~~~~~l~a~~~~~~~~~VRv-~~~d~-----------~di~~ 106 (287)
T 2v5j_A 43 LWLGLSSSYSAELLAGAGFDWLLID--GEHA--PNNVQTVLTQLQAIAPYPSQPVVRP-SWNDP-----------VQIKQ 106 (287)
T ss_dssp EEECSCCHHHHHHHHTSCCSEEEEE--SSSS--SCCHHHHHHHHHHHTTSSSEEEEEC-SSSCH-----------HHHHH
T ss_pred EEEECCCHHHHHHHHhCCCCEEEEe--CCCc--cchHHHHHHHHHHHHhcCCCEEEEE-CCCCH-----------HHHHH
Confidence 4456789999999999999987664 3333 12355555444332 2356679997 55441 18999
Q ss_pred HHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 91 FVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 91 ~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+.+.|++||++=..+. .+..+++++.++
T Consensus 107 ~ld~ga~~ImlP~V~s-----aeea~~~~~~~~ 134 (287)
T 2v5j_A 107 LLDVGTQTLLVPMVQN-----ADEAREAVRATR 134 (287)
T ss_dssp HHHTTCCEEEESCCCS-----HHHHHHHHHHTS
T ss_pred HHhCCCCEEEeCCCCC-----HHHHHHHHHHhc
Confidence 9999999998866542 334667777664
No 339
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=74.77 E-value=16 Score=30.13 Aligned_cols=95 Identities=16% Similarity=0.169 Sum_probs=54.0
Q ss_pred HHHHHHcCCCEEEecC-CCCCC-----CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 22 ALAAVRGGADRLELCA-ALSEG-----GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 22 a~~A~~~GAdRIELc~-~l~~G-----GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+...++.|+|-|++-. ..... +--....+++.+++.+++||.+ .|+ .+|.++. +.+.+.|
T Consensus 245 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~Gg-i~t~e~a-------~~~l~~G 310 (349)
T 3hgj_A 245 ARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA------VGL-ITTPEQA-------ETLLQAG 310 (349)
T ss_dssp HHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE------CSS-CCCHHHH-------HHHHHTT
T ss_pred HHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE------ECC-CCCHHHH-------HHHHHCC
Confidence 6667788999999974 11110 0011456788888888888743 232 3455444 4455667
Q ss_pred -CCEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEeecc
Q psy7930 96 -ADGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFHRAF 133 (146)
Q Consensus 96 -adG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFHRAF 133 (146)
+|.|.||=-- --|.+...++.+..+ ..+..+.|+|
T Consensus 311 ~aD~V~iGR~~---lanPdl~~k~~~~l~~~~~~~~~~~~~~ 349 (349)
T 3hgj_A 311 SADLVLLGRVL---LRDPYFPLRAAKALGVAPEVPPQYQRGF 349 (349)
T ss_dssp SCSEEEESTHH---HHCTTHHHHHHHHTTCCCCCCGGGGGGC
T ss_pred CceEEEecHHH---HhCchHHHHHHHHCCCCCCCcchhhcCC
Confidence 9999998210 012234445544433 3444555554
No 340
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=74.62 E-value=3.5 Score=34.09 Aligned_cols=67 Identities=13% Similarity=0.039 Sum_probs=44.1
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCC----CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVL----VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~----ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+-+..+.+.||++|-||+- .|.+||. ..+++.+++.++ +|+.+---- ..| +. ..-...+.+
T Consensus 155 ~~~~~~~~~G~~~i~l~DT--~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hn-d~G--------lA--~AN~laA~~ 221 (325)
T 3eeg_A 155 RMVEAVIEAGADVVNIPDT--TGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHN-DLG--------LA--TANSLAALQ 221 (325)
T ss_dssp HHHHHHHHHTCSEEECCBS--SSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCC-TTS--------CH--HHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEecCc--cCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCC-CCC--------HH--HHHHHHHHH
Confidence 4456678889999999994 7999994 668888888775 666554333 112 11 133445556
Q ss_pred cCCCEE
Q psy7930 94 SGADGF 99 (146)
Q Consensus 94 ~GadG~ 99 (146)
+|++-|
T Consensus 222 aGa~~v 227 (325)
T 3eeg_A 222 NGARQV 227 (325)
T ss_dssp HTCCEE
T ss_pred hCCCEE
Confidence 788643
No 341
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=74.61 E-value=8.9 Score=31.47 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=47.6
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC--CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL--VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~--ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
++.+.+-+++|||=|=+= +..|+...++++.+.++ +|+ ++.| -.++. + ++..+.++|.
T Consensus 173 i~Ra~ay~eAGAd~i~~e------~~~~~~~~~~~i~~~~~~~~P~--i~~~-~~~~~--~---------~~~eL~~lGv 232 (295)
T 1s2w_A 173 LKRAEAYRNAGADAILMH------SKKADPSDIEAFMKAWNNQGPV--VIVP-TKYYK--T---------PTDHFRDMGV 232 (295)
T ss_dssp HHHHHHHHHTTCSEEEEC------CCSSSSHHHHHHHHHHTTCSCE--EECC-STTTT--S---------CHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEEc------CCCCCHHHHHHHHHHcCCCCCE--EEeC-CCCCC--C---------CHHHHHHcCC
Confidence 456788999999987662 23578889999999887 787 4557 32211 1 2678889999
Q ss_pred CEEEEee
Q psy7930 97 DGFVIGA 103 (146)
Q Consensus 97 dG~VfG~ 103 (146)
.-+.+|.
T Consensus 233 ~~v~~~~ 239 (295)
T 1s2w_A 233 SMVIWAN 239 (295)
T ss_dssp CEEEECS
T ss_pred cEEEECh
Confidence 9999984
No 342
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=74.41 E-value=3.1 Score=36.03 Aligned_cols=65 Identities=18% Similarity=0.188 Sum_probs=45.5
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+..+.+.||++|-||+- .|.+||. ..+++.+++..++|+.+---- ..| +. ..-...+.++||+.|
T Consensus 186 ~~~~~~~Ga~~i~l~DT--vG~~~P~~v~~lv~~l~~~~~~~i~~H~Hn-d~G--------lA--vAN~laAv~aGa~~v 252 (423)
T 3ivs_A 186 YKAVDKIGVNRVGIADT--VGCATPRQVYDLIRTLRGVVSCDIECHFHN-DTG--------MA--IANAYCALEAGATHI 252 (423)
T ss_dssp HHHHHHHCCSEEEEEET--TSCCCHHHHHHHHHHHHHHCSSEEEEEEBC-TTS--------CH--HHHHHHHHHTTCCEE
T ss_pred HHHHHHhCCCccccCCc--cCcCCHHHHHHHHHHHHhhcCCeEEEEECC-CCc--------hH--HHHHHHHHHhCCCEE
Confidence 56678899999999994 7999994 578888888877777665444 222 11 234555667898733
No 343
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=74.31 E-value=30 Score=33.35 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=64.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCC--CC-cc--cCHHHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAG--FD-FV--FSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~--gd-F~--Ys~~E~~~M~~dI~~~~~~ 94 (146)
+++..|.++|+|.+-+..++.. +.--...++.+++ .+..+...|.- .+ +| |- |+.+. ..+=++.+.++
T Consensus 649 ~~i~~a~~~g~d~irif~sl~~--~~~~~~~i~~~~~-~g~~v~~~i~~-~~~~~d~~r~~~~~~~---~~~~~~~~~~~ 721 (1165)
T 2qf7_A 649 YFVRQAAKGGIDLFRVFDCLNW--VENMRVSMDAIAE-ENKLCEAAICY-TGDILNSARPKYDLKY---YTNLAVELEKA 721 (1165)
T ss_dssp HHHHHHHHHTCCEEEEECTTCC--GGGGHHHHHHHHH-TTCEEEEEEEC-CSCTTCTTSGGGCHHH---HHHHHHHHHHT
T ss_pred HHHHHHHhcCcCEEEEEeeHHH--HHHHHHHHHHHHh-ccceEEEEEEE-eccccCCCCCCCCHHH---HHHHHHHHHHc
Confidence 6788899999999999876542 1111223333333 24556655544 21 11 22 45444 44456677889
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC---CCCeEEee
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG---DRPITFHR 131 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~---~~~vtFHR 131 (146)
||+-|.+. +-.|-.....+.+|++..+ +.++-||-
T Consensus 722 Ga~~i~l~--DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~ 759 (1165)
T 2qf7_A 722 GAHIIAVK--DMAGLLKPAAAKVLFKALREATGLPIHFHT 759 (1165)
T ss_dssp TCSEEEEE--ETTCCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCEEEEe--CccCCcCHHHHHHHHHHHHHhcCCeEEEEE
Confidence 99977664 6678788888888877664 67888873
No 344
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=74.13 E-value=9.7 Score=31.79 Aligned_cols=88 Identities=16% Similarity=0.133 Sum_probs=54.8
Q ss_pred EecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC-Cc---EEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 15 CVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL-VP---VFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 15 cv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~-ip---v~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
-+.|++.+..|...|+|-|=|-- + .|.. +...+........ .+ ..++||. .+.+- .||+.
T Consensus 49 ~i~~p~~~e~a~~~GaD~vilDl--E-ha~~-~~e~~~~~l~a~~~~~~~~~~~~VRv-~~~~~-----------~di~~ 112 (339)
T 1izc_A 49 GIPSTFVTKVLAATKPDFVWIDV--E-HGMF-NRLELHDAIHAAQHHSEGRSLVIVRV-PKHDE-----------VSLST 112 (339)
T ss_dssp CSCCHHHHHHHHHTCCSEEEEET--T-TSCC-CHHHHHHHHHHHHHHTTTCSEEEEEC-CTTCH-----------HHHHH
T ss_pred ECCCHHHHHHHHhCCCCEEEEEC--C-CCCC-cHHHHHHHHHHhhhcCCCCCeEEEEe-CCCCH-----------HHHHH
Confidence 35688999999999999876642 2 3333 3333333222221 12 5578997 55431 58999
Q ss_pred HHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 91 FVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 91 ~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+.+.|++||+|=..+ +.+..++++++++
T Consensus 113 ~LdaGa~gImlP~V~-----saee~~~~~~~~~ 140 (339)
T 1izc_A 113 ALDAGAAGIVIPHVE-----TVEEVREFVKEMY 140 (339)
T ss_dssp HHHHTCSEEEETTCC-----CHHHHHHHHHHHS
T ss_pred HHhCCCCEEEeCCCC-----CHHHHHHHHHHhc
Confidence 999999998885543 2345555555553
No 345
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=74.08 E-value=23 Score=26.84 Aligned_cols=105 Identities=11% Similarity=0.039 Sum_probs=52.1
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEE-------ccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMI-------RVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMI-------RP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
.+.+..|.++|..++=.+.. .+...+...+.++.+..++.|+..+ -| ..- ...+.+++. +.+...
T Consensus 36 ~~~~~~~~~~Gv~~iv~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~~~hP-~~~-~~~~~~~l~---~~~~~~ 107 (291)
T 1bf6_A 36 CQEMNDLMTRGVRNVIEMTN---RYMGRNAQFMLDVMRETGINVVACTGYYQDAFFP-EHV-ATRSVQELA---QEMVDE 107 (291)
T ss_dssp HHHHHHHHHTTEEEEEECCC---GGGTCCHHHHHHHHHHHCCEEEEEECCCCGGGCC-THH-HHSCHHHHH---HHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCC---CcCCCCHHHHHHHHHhcCCeEEEeeccccCccCc-Hhh-hcCCHHHHH---HHHHHH
Confidence 44667788899999854442 1333345555554444443333222 22 100 012344442 222222
Q ss_pred HHcCC-----CEEEEee--ecCCC--CcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 92 VESGA-----DGFVIGA--LTGEQ--EIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 92 ~~~Ga-----dG~VfG~--L~~dg--~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
.+.|+ +-.++|- |+..+ ..+.+.+++.+++|+ ++++++|-
T Consensus 108 l~~gi~~~~~~~~~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~ 158 (291)
T 1bf6_A 108 IEQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHT 158 (291)
T ss_dssp HHTCSTTSSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred HHhccCCcCcceeeEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeC
Confidence 23354 3345553 44222 233456777787776 89999996
No 346
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=73.96 E-value=16 Score=29.58 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=64.0
Q ss_pred HHHHHHHHcCCCEEEecCCCC--CCCCCCCHHH---HHHHHhh---CCCcEEEEEccCCCCCcccC-----HHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALS--EGGLTPTLGL---YRVIKRL---VLVPVFVMIRVRAGFDFVFS-----QAEKEIMAL 86 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~--~GGlTPS~g~---i~~~~~~---~~ipv~vMIRP~R~gdF~Ys-----~~E~~~M~~ 86 (146)
+.+...+++||.-|-|=+... -..+-|.-.. |+.+++. .++|..|+=|- -.|.-. ++.++...+
T Consensus 96 ~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRt---da~~~~~g~~~~~~~~~ai~ 172 (275)
T 2ze3_A 96 RTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNART---DTFLKGHGATDEERLAETVR 172 (275)
T ss_dssp HHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEEC---CTTTTTCSSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEec---hhhhccccccchhhHHHHHH
Confidence 445667789999988866432 2234444334 4444443 27898777775 223321 256899999
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+.+.+.++|||++++=++ -|.+..+++.+..+
T Consensus 173 Ra~ay~eAGAd~i~~e~~-----~~~~~~~~i~~~~~ 204 (275)
T 2ze3_A 173 RGQAYADAGADGIFVPLA-----LQSQDIRALADALR 204 (275)
T ss_dssp HHHHHHHTTCSEEECTTC-----CCHHHHHHHHHHCS
T ss_pred HHHHHHHCCCCEEEECCC-----CCHHHHHHHHHhcC
Confidence 999999999999998544 45677888887765
No 347
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=73.94 E-value=3.2 Score=31.39 Aligned_cols=64 Identities=11% Similarity=0.065 Sum_probs=40.3
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+++++..+.++|++-+-|- .-.+|+. ..+++.+++...-...+||.+ +++.+.+.|
T Consensus 31 ~l~~~~~~~~~G~~~v~lr----~~~~~~~~~~~~~~~l~~~~~~~~~l~v~~------------------~~~~a~~~g 88 (221)
T 1yad_A 31 ELARIIITIQNEVDFIHIR----ERSKSAADILKLLDLIFEGGIDKRKLVMNG------------------RVDIALFST 88 (221)
T ss_dssp HHHHHHHHHGGGCSEEEEC----CTTSCHHHHHHHHHHHHHTTCCGGGEEEES------------------CHHHHHTTT
T ss_pred hHHHHHHHHHCCCCEEEEc----cCCCCHHHHHHHHHHHHHhcCcCCeEEEeC------------------hHHHHHHcC
Confidence 3577888999999988774 2346665 556666655321112455543 235577788
Q ss_pred CCEEEEee
Q psy7930 96 ADGFVIGA 103 (146)
Q Consensus 96 adG~VfG~ 103 (146)
+||+-|+.
T Consensus 89 ad~v~l~~ 96 (221)
T 1yad_A 89 IHRVQLPS 96 (221)
T ss_dssp CCEEEECT
T ss_pred CCEEEeCC
Confidence 88888773
No 348
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=73.70 E-value=2.6 Score=34.14 Aligned_cols=90 Identities=11% Similarity=-0.092 Sum_probs=57.1
Q ss_pred CHHHHHH----HHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 18 SVASALA----AVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 18 s~~~a~~----A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
+++.+.. +.+.|+|+|=||+. .|..||. ..+++.+++.+ ++|+.+.--- ..| .=...+..
T Consensus 157 ~~~~~~~~~~~~~~~G~d~i~l~DT--~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn-~~G----------la~An~la 223 (302)
T 2ftp_A 157 DPRQVAWVARELQQMGCYEVSLGDT--IGVGTAGATRRLIEAVASEVPRERLAGHFHD-TYG----------QALANIYA 223 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEES--SSCCCHHHHHHHHHHHTTTSCGGGEEEEEBC-TTS----------CHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCC--CCCcCHHHHHHHHHHHHHhCCCCeEEEEeCC-Ccc----------HHHHHHHH
Confidence 4555444 44799999999974 5778994 67888888887 5888765543 222 11245666
Q ss_pred HHHcCCCEEEEeee---c------CCCCcCHHHHHHHHH
Q psy7930 91 FVESGADGFVIGAL---T------GEQEIDIEFIRQLKT 120 (146)
Q Consensus 91 ~~~~GadG~VfG~L---~------~dg~iD~~~~~~Li~ 120 (146)
+.++|++-|=..+. - .-|..+++.+-..+.
T Consensus 224 Av~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~ 262 (302)
T 2ftp_A 224 SLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLN 262 (302)
T ss_dssp HHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHH
T ss_pred HHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHH
Confidence 77889875543322 1 346666665554444
No 349
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=73.61 E-value=3.5 Score=39.77 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+-+..+.+.||++|=||+ ..|.+||. ..+++.+++.+++||.+.--- ..|- . ..-...+.++||+
T Consensus 713 ~~~~~~~~~Ga~~i~l~D--T~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn-d~Gl--------A--vAn~laAv~aGa~ 779 (1165)
T 2qf7_A 713 NLAVELEKAGAHIIAVKD--MAGLLKPAAAKVLFKALREATGLPIHFHTHD-TSGI--------A--AATVLAAVEAGVD 779 (1165)
T ss_dssp HHHHHHHHTTCSEEEEEE--TTCCCCHHHHHHHHHHHHHHCSSCEEEEECB-TTSC--------H--HHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeC--ccCCcCHHHHHHHHHHHHHhcCCeEEEEECC-CCCH--------H--HHHHHHHHHhCCC
Confidence 346778899999999999 47999995 678999999888998876655 3331 1 2344555678887
Q ss_pred EE
Q psy7930 98 GF 99 (146)
Q Consensus 98 G~ 99 (146)
-|
T Consensus 780 ~v 781 (1165)
T 2qf7_A 780 AV 781 (1165)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 350
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=73.47 E-value=3 Score=35.34 Aligned_cols=44 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 48 LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 48 ~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+.+++++++..++||.+ |- -|| ..|+ +|+..+.++|+|||.+|=
T Consensus 229 lell~~i~~~~~IPVV~-VA--eGG--I~Tp-------eda~~~l~~GaDgV~VGs 272 (330)
T 2yzr_A 229 YEVLLEVKKLGRLPVVN-FA--AGG--VATP-------ADAALMMQLGSDGVFVGS 272 (330)
T ss_dssp HHHHHHHHHHTSCSSEE-EE--CSC--CCSH-------HHHHHHHHTTCSCEEESH
T ss_pred HHHHHHHHHhCCCCeEE-EE--ECC--CCCH-------HHHHHHHHcCcCEEeeHH
Confidence 37888888888999741 21 244 2233 566777788999999983
No 351
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=72.86 E-value=17 Score=27.45 Aligned_cols=77 Identities=16% Similarity=0.149 Sum_probs=44.1
Q ss_pred ccceeEEEec--CHHHHHHHH---HcCCCEEEecCCCCCCCCCC----CHHHHHHHHhh-CCCcEEEEEccCCCCCcccC
Q psy7930 8 NKTTLEVCVD--SVASALAAV---RGGADRLELCAALSEGGLTP----TLGLYRVIKRL-VLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 8 ~~~~lEvcv~--s~~~a~~A~---~~GAdRIELc~~l~~GGlTP----S~g~i~~~~~~-~~ipv~vMIRP~R~gdF~Ys 77 (146)
++..|=+|.| |++++.... ++|+|-+|+- +.| ...+++++++. .+.|+..++-. ...
T Consensus 5 ~~~~lilalD~~~~~~~~~~~~~~~~~vd~ie~g-------~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l-~d~----- 71 (218)
T 3jr2_A 5 TKPMIQIALDQTNLTDAVAVASNVASYVDVIEVG-------TILAFAEGMKAVSTLRHNHPNHILVCDMKT-TDG----- 71 (218)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHGGGCSEEEEC-------HHHHHHHTTHHHHHHHHHCTTSEEEEEEEE-CSC-----
T ss_pred CCCCeEEEeCCCCHHHHHHHHHHhcCCceEEEeC-------cHHHHhcCHHHHHHHHHhCCCCcEEEEEee-ccc-----
Confidence 3445666766 455554433 4688888863 322 24678888887 46788776655 321
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+.. -++.+.++|+|++++=.
T Consensus 72 p~~------~~~~~~~aGad~i~vh~ 91 (218)
T 3jr2_A 72 GAI------LSRMAFEAGADWITVSA 91 (218)
T ss_dssp HHH------HHHHHHHHTCSEEEEET
T ss_pred HHH------HHHHHHhcCCCEEEEec
Confidence 111 23555666666666543
No 352
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=72.81 E-value=23 Score=28.61 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=44.5
Q ss_pred CHHHHHHHH-HcCCCEEEecCCCCCC---CCCCC----HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 18 SVASALAAV-RGGADRLELCAALSEG---GLTPT----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 18 s~~~a~~A~-~~GAdRIELc~~l~~G---GlTPS----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
+++.+..|. ..|++-+++--+.... .-.+. ...++.+++ .++||.|=+ - ..| .+.+ |.+
T Consensus 133 ~~~~~~~a~~~~~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~~~Pv~vK~-v-~~g---~~~e-------~a~ 199 (332)
T 1vcf_A 133 GRDDLLRLVEMLEADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-LPFPVMVKE-V-GHG---LSRE-------AAL 199 (332)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-CSSCEEEEC-S-SSC---CCHH-------HHH
T ss_pred ChHHHHHHHhhcCCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-CCCCEEEEe-c-CCC---CCHH-------HHH
Confidence 455555553 4478877765442100 22344 688999989 899987652 2 122 3443 467
Q ss_pred HHHHcCCCEEEE
Q psy7930 90 QFVESGADGFVI 101 (146)
Q Consensus 90 ~~~~~GadG~Vf 101 (146)
.+.++|+|+|++
T Consensus 200 ~~~~~G~d~I~v 211 (332)
T 1vcf_A 200 ALRDLPLAAVDV 211 (332)
T ss_dssp HHTTSCCSEEEC
T ss_pred HHHHcCCCEEEe
Confidence 889999999998
No 353
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.24 E-value=39 Score=27.64 Aligned_cols=101 Identities=11% Similarity=0.115 Sum_probs=63.6
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+.+++..|.++|+|.+-+...++.- -=....++.+++ .++.+...+-- .+.|+++.+..+ ++.+.+.|++
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~s~~--~~~~~~i~~ak~-~G~~v~~~~~~----a~~~~~e~~~~i---a~~~~~~Ga~ 164 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHCTEA--DVSKQHIEYARN-LGMDTVGFLMM----SHMIPAEKLAEQ---GKLMESYGAT 164 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEETTCG--GGGHHHHHHHHH-HTCEEEEEEES----TTSSCHHHHHHH---HHHHHHHTCS
T ss_pred cHHHHHHHHhCCcCEEEEEEeccHH--HHHHHHHHHHHH-CCCEEEEEEEe----CCCCCHHHHHHH---HHHHHHCCCC
Confidence 5788999999999999886433210 113445555544 35665555421 145666555544 4556677999
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhC-----CCCeEEe
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIG-----DRPITFH 130 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~-----~~~vtFH 130 (146)
-|.+ -+--|........++++..+ +.++.||
T Consensus 165 ~i~l--~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H 200 (345)
T 1nvm_A 165 CIYM--ADSGGAMSMNDIRDRMRAFKAVLKPETQVGMH 200 (345)
T ss_dssp EEEE--ECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEE
T ss_pred EEEE--CCCcCccCHHHHHHHHHHHHHhcCCCceEEEE
Confidence 6554 35566666777777776653 5788888
No 354
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=72.18 E-value=4.1 Score=31.77 Aligned_cols=48 Identities=15% Similarity=0.202 Sum_probs=35.8
Q ss_pred HHHHHHHH-HHcCCCEEEEeeecC------CCCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 84 MALDCHQF-VESGADGFVIGALTG------EQEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 84 M~~dI~~~-~~~GadG~VfG~L~~------dg~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
..++++.+ ++.|+.||-+|.-.. ...++.+....+.++|. ++++.+|-
T Consensus 109 ~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~ 165 (327)
T 2dvt_A 109 ATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHP 165 (327)
T ss_dssp HHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECC
Confidence 34556666 457999998886432 22577788999999886 89999995
No 355
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=72.13 E-value=5.2 Score=32.48 Aligned_cols=88 Identities=15% Similarity=0.120 Sum_probs=56.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCC----CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVL----VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~----ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+-+..+.+.||++|-||+. .|.+||. ..+++.+++.+. +|+.+---- ..| +. ..-...+.+
T Consensus 154 ~~~~~~~~~G~~~i~l~DT--~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hn-d~G--------la--~AN~laA~~ 220 (293)
T 3ewb_X 154 EAVQTAIDAGATVINIPDT--VGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHD-DLG--------MA--TANALAAIE 220 (293)
T ss_dssp HHHHHHHHTTCCEEEEECS--SSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBC-TTS--------CH--HHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCC--CCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCC-CcC--------hH--HHHHHHHHH
Confidence 3456688899999999994 7999995 668888888764 566654443 222 11 234556667
Q ss_pred cCCCEE---EEeeecCCCCcCHHHHHHHHH
Q psy7930 94 SGADGF---VIGALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 94 ~GadG~---VfG~L~~dg~iD~~~~~~Li~ 120 (146)
+|++-| +.|.=-.-|..+.+.+-..+.
T Consensus 221 aGa~~vd~sv~GlGeraGN~~~E~vv~~L~ 250 (293)
T 3ewb_X 221 NGARRVEGTINGIGERAGNTALEEVAVALH 250 (293)
T ss_dssp TTCCEEEEBGGGCCTTTCBCBHHHHHHHHH
T ss_pred hCCCEEEeeccccccccccHhHHHHHHHHH
Confidence 899743 233223456777776655554
No 356
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=72.04 E-value=16 Score=28.64 Aligned_cols=86 Identities=15% Similarity=0.068 Sum_probs=56.3
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
+.+++.+..|...|+|-|=|- ++.+ | .....+...... .-+..++||. -+.|-.+ |+.+.+
T Consensus 27 v~~p~~~e~a~~~gaD~v~lD--lEd~---p~~~~~a~~~~~~~~~~~~~~~VRv-~~~~~~~-----------i~~~l~ 89 (256)
T 1dxe_A 27 LSNPISTEVLGLAGFDWLVLD--GEHA---PNDISTFIPQLMALKGSASAPVVRV-PTNEPVI-----------IKRLLD 89 (256)
T ss_dssp SCSHHHHHHHTTSCCSEEEEE--SSSS---SCCHHHHHHHHHHTTTCSSEEEEEC-SSSCHHH-----------HHHHHH
T ss_pred CCCHHHHHHHHhCCCCEEEEc--CCCC---CCCHHHHHHHHHHHHhCCCcEEEEC-CCCCHHH-----------HHHHHh
Confidence 478999999999999977664 3444 5 355555444333 2355679997 5544221 778888
Q ss_pred cCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 94 SGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 94 ~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
.|++||++=..+ +.+..+++++.++
T Consensus 90 ~g~~gI~~P~V~-----s~~ev~~~~~~~~ 114 (256)
T 1dxe_A 90 IGFYNFLIPFVE-----TKEEAELAVASTR 114 (256)
T ss_dssp TTCCEEEESCCC-----SHHHHHHHHHTTS
T ss_pred cCCceeeecCcC-----CHHHHHHHHHHhc
Confidence 999998886544 2344466666664
No 357
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=71.66 E-value=4.7 Score=33.84 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=44.4
Q ss_pred HHHHHHHHcCCC----EEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH-c
Q psy7930 20 ASALAAVRGGAD----RLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE-S 94 (146)
Q Consensus 20 ~~a~~A~~~GAd----RIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~-~ 94 (146)
..+..|.+.||| =|-+-- . ..++++.+.+.+||.+. ||+=.=+++|+-.| ++.+.+ .
T Consensus 204 ~aaRiAaELGADs~~tivK~~y--~--------e~f~~Vv~a~~vPVVia-----GG~k~~~~~e~L~~---v~~A~~~a 265 (307)
T 3fok_A 204 QSVAIAAGLGNDSSYTWMKLPV--V--------EEMERVMESTTMPTLLL-----GGEGGNDPDATFAS---WEHALTLP 265 (307)
T ss_dssp HHHHHHHTCSSCCSSEEEEEEC--C--------TTHHHHGGGCSSCEEEE-----CCSCC--CHHHHHH---HHHHTTST
T ss_pred HHHHHHHHhCCCcCCCEEEeCC--c--------HHHHHHHHhCCCCEEEe-----CCCCCCCHHHHHHH---HHHHHHhC
Confidence 567778888999 777631 1 34688888888998664 44433244555544 555667 6
Q ss_pred CCCEEEEe
Q psy7930 95 GADGFVIG 102 (146)
Q Consensus 95 GadG~VfG 102 (146)
|+.|+++|
T Consensus 266 Ga~Gv~vG 273 (307)
T 3fok_A 266 GVRGLTVG 273 (307)
T ss_dssp TEEEEEEC
T ss_pred CCeEEeec
Confidence 99999999
No 358
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=71.59 E-value=7.9 Score=38.73 Aligned_cols=70 Identities=21% Similarity=0.147 Sum_probs=48.6
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCC------------CCCHHHHHHHHhhC-------CCcEEEEEccCCCCCcccC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGL------------TPTLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGl------------TPS~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys 77 (146)
...+.|..++++|||-|-+ ++.. ||+ .|....+.++.+.+ ++||.+. || ....
T Consensus 1005 gi~~~A~~a~~AGAD~IvV-sG~e-GGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAd-----GG-IrtG 1076 (1479)
T 1ea0_A 1005 GIGTIAAGVAKANADIILI-SGNS-GGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTD-----GG-LKTG 1076 (1479)
T ss_dssp THHHHHHHHHHTTCSEEEE-ECTT-CCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEE-----SS-CCSH
T ss_pred ChHHHHHHHHHcCCcEEEE-cCCC-CCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEE-----CC-CCCH
Confidence 4567899999999999976 4433 443 25566666666643 5776543 33 3322
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+||++|-+|
T Consensus 1077 --------~DVakALaLGAdaV~iG 1093 (1479)
T 1ea0_A 1077 --------RDIVIAAMLGAEEFGIG 1093 (1479)
T ss_dssp --------HHHHHHHHTTCSEEECC
T ss_pred --------HHHHHHHHcCCCeeeEc
Confidence 78889999999999987
No 359
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=71.58 E-value=4.7 Score=32.45 Aligned_cols=44 Identities=20% Similarity=0.161 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEcc
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRV 68 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP 68 (146)
.+.+...++.|++-|=++.| |.|.-.+..+++.+++||.=||.|
T Consensus 57 ~~~~~~L~~~g~~~IVIACN------Ta~~~al~~lr~~~~iPvigii~p 100 (269)
T 3ist_A 57 WEMTNFLVDRGIKMLVIACN------TATAAALYDIREKLDIPVIGVIQP 100 (269)
T ss_dssp HHHHHHHHHTTCSEEEECCH------HHHHHHHHHHHHHCSSCEEESHHH
T ss_pred HHHHHHHHHCCCCEEEEeCC------CccHHHHHHHHHhcCCCEEeecHH
Confidence 45556667788888888876 566545677777778887776654
No 360
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=71.57 E-value=6.5 Score=29.81 Aligned_cols=84 Identities=20% Similarity=0.165 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCCEEEecC-CCCC-CCCCCCHHHHHHHHhhC--CCcEEEE--EccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCA-ALSE-GGLTPTLGLYRVIKRLV--LVPVFVM--IRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~-~l~~-GGlTPS~g~i~~~~~~~--~ipv~vM--IRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
..++....+.|.+-+-|-- .++. =|.+.|..-++.+++.. ++||.|- ||| . .+..+.
T Consensus 119 ~~~~~~l~~~~~~~~vl~~a~~~~~~G~~g~~~~i~~lr~~~~~~~~i~v~GGI~~-~----------------~~~~~~ 181 (216)
T 1q6o_A 119 WEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLAL-E----------------DLPLFK 181 (216)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCCG-G----------------GGGGGT
T ss_pred hhhHHHHHhcCcHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCcEEEECCcCh-h----------------hHHHHH
Confidence 5566666666765544411 1110 13333777777777766 4555443 334 1 146788
Q ss_pred HcCCCEEEEee-ecCCCCcC-HHHHHHHHHH
Q psy7930 93 ESGADGFVIGA-LTGEQEID-IEFIRQLKTI 121 (146)
Q Consensus 93 ~~GadG~VfG~-L~~dg~iD-~~~~~~Li~~ 121 (146)
++|||++|+|= ++... | .++++++.+.
T Consensus 182 ~aGad~ivvG~~I~~a~--dp~~~~~~~~~~ 210 (216)
T 1q6o_A 182 GIPIHVFIAGRSIRDAA--SPVEAARQFKRS 210 (216)
T ss_dssp TSCCSEEEESHHHHTSS--CHHHHHHHHHHH
T ss_pred HcCCCEEEEeehhcCCC--CHHHHHHHHHHH
Confidence 89999999993 33221 3 3455555543
No 361
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=71.51 E-value=2.2 Score=37.94 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEee-----e-cCCCCcCHHHHHHHHHHhC--CCCeEE
Q psy7930 81 KEIMALDCHQFVESGADGFVIGA-----L-TGEQEIDIEFIRQLKTIIG--DRPITF 129 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~-----L-~~dg~iD~~~~~~Li~~a~--~~~vtF 129 (146)
-+.+++|++.+|++|++.|-+++ + -..|..|.+.++++++.|+ |+.+..
T Consensus 13 ~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~~ld~~ld~a~~~Gi~vil 69 (645)
T 1kwg_A 13 KERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGWLDEAIATLAAEGLKVVL 69 (645)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCCccChHHHHHHHHHHHHCCCEEEE
Confidence 47889999999999999999985 2 2357899999999999997 666655
No 362
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=71.37 E-value=11 Score=31.62 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=42.4
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCC-CCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLT-PTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGF 99 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlT-PS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~ 99 (146)
+..+++.|+|-|++-.....+... +...+++.+++.+++||.+ .|++ +.++. ..+.+.| +|+|
T Consensus 261 a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~------~Ggi--~~~~a-------~~~l~~g~aD~V 325 (377)
T 2r14_A 261 AGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIY------CGNY--DAGRA-------QARLDDNTADAV 325 (377)
T ss_dssp HHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEE------ESSC--CHHHH-------HHHHHTTSCSEE
T ss_pred HHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEE------ECCC--CHHHH-------HHHHHCCCceEE
Confidence 677788999999997532111100 1356788889999999754 2445 44443 4444556 9999
Q ss_pred EEe
Q psy7930 100 VIG 102 (146)
Q Consensus 100 VfG 102 (146)
.||
T Consensus 326 ~ig 328 (377)
T 2r14_A 326 AFG 328 (377)
T ss_dssp EES
T ss_pred eec
Confidence 998
No 363
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=71.13 E-value=7.1 Score=31.13 Aligned_cols=72 Identities=22% Similarity=0.223 Sum_probs=47.3
Q ss_pred cceeEEEecCHHH----HHHHHHcCCCEEEecCCCCC-CCCCC-CHHH--HHHHHhhCCCcEEEEEccCCCCCcccCHHH
Q psy7930 9 KTTLEVCVDSVAS----ALAAVRGGADRLELCAALSE-GGLTP-TLGL--YRVIKRLVLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 9 ~~~lEvcv~s~~~----a~~A~~~GAdRIELc~~l~~-GGlTP-S~g~--i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
++++|.|.-+.+. ++.|.++|||-|--.....- ||.|| ...+ |+++ +++|| -+ -|| -. +.++
T Consensus 137 KvIlEt~~L~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l~~m~~~---v~v~V----Ka-aGG-ir-t~~~ 206 (234)
T 1n7k_A 137 KVILEAPLWDDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRLASLAKP---LGMGV----KA-SGG-IR-SGID 206 (234)
T ss_dssp EEECCGGGSCHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHHHHHHGG---GTCEE----EE-ESS-CC-SHHH
T ss_pred EEEEeccCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHHHHHHHH---HCCCE----EE-ecC-CC-CHHH
Confidence 3478888877654 55678899999999887776 78775 4555 5543 44444 34 344 33 4455
Q ss_pred HHHHHHHHHHHHHcCCC
Q psy7930 81 KEIMALDCHQFVESGAD 97 (146)
Q Consensus 81 ~~~M~~dI~~~~~~Gad 97 (146)
...|. ++|++
T Consensus 207 al~~i-------~aGa~ 216 (234)
T 1n7k_A 207 AVLAV-------GAGAD 216 (234)
T ss_dssp HHHHH-------HTTCS
T ss_pred HHHHH-------HcCcc
Confidence 55555 79999
No 364
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=71.13 E-value=3.2 Score=33.02 Aligned_cols=85 Identities=14% Similarity=0.042 Sum_probs=57.8
Q ss_pred ccceeEEEecCHHH----HHHHHHcCCCEEEecCCCC----------CCCCCC-CHHHHHHHHhhCC--CcEEEEEccCC
Q psy7930 8 NKTTLEVCVDSVAS----ALAAVRGGADRLELCAALS----------EGGLTP-TLGLYRVIKRLVL--VPVFVMIRVRA 70 (146)
Q Consensus 8 ~~~~lEvcv~s~~~----a~~A~~~GAdRIELc~~l~----------~GGlTP-S~g~i~~~~~~~~--ipv~vMIRP~R 70 (146)
.+++||.|.-+.+. +..|.++|||-|--..... .||.|| ...+|+++.+.++ +|| -+ -
T Consensus 116 lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~v----Ka-a 190 (226)
T 1vcv_A 116 VKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGV----KM-A 190 (226)
T ss_dssp EEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEE----EE-E
T ss_pred ceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceE----EE-e
Confidence 45678888888764 4557788999999998887 788888 5678877765554 444 45 4
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCC--EEEEee
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGAD--GFVIGA 103 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~Gad--G~VfG~ 103 (146)
|| .. |.++...|.+.++ +|++ -|=||.
T Consensus 191 GG-ir-t~~~al~~i~a~~----~Ga~~~~fRiGt 219 (226)
T 1vcv_A 191 GG-IR-TREQAKAIVDAIG----WGEDPARVRLGT 219 (226)
T ss_dssp SS-CC-SHHHHHHHHHHHC----SCSCTTTEEEEE
T ss_pred CC-CC-CHHHHHHHHHHHH----CCCCcCCceEec
Confidence 55 22 3666666666652 7987 344453
No 365
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=71.03 E-value=7.4 Score=31.74 Aligned_cols=73 Identities=22% Similarity=0.170 Sum_probs=51.0
Q ss_pred HHHHHHHHcCCCEEEecCCCC---CCCCCCCHHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 20 ASALAAVRGGADRLELCAALS---EGGLTPTLGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~---~GGlTPS~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
.++..|.+.|||-|...=|+. .|-..--...++++++.+ +.|+-|||-. + ..+++|+.. =.+.+.++|
T Consensus 115 ~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt--~---~Lt~eei~~---A~~ia~eaG 186 (260)
T 3r12_A 115 HEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIET--C---YLDTEEKIA---ACVISKLAG 186 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCG--G---GCCHHHHHH---HHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeC--C---CCCHHHHHH---HHHHHHHhC
Confidence 577889999999999987753 243333455666777666 5788888866 2 337777644 456788999
Q ss_pred CCEEE
Q psy7930 96 ADGFV 100 (146)
Q Consensus 96 adG~V 100 (146)
||-|=
T Consensus 187 ADfVK 191 (260)
T 3r12_A 187 AHFVK 191 (260)
T ss_dssp CSEEE
T ss_pred cCEEE
Confidence 99654
No 366
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=70.93 E-value=3.1 Score=32.17 Aligned_cols=50 Identities=10% Similarity=0.116 Sum_probs=36.2
Q ss_pred HHHHHHHHHH-HcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 83 IMALDCHQFV-ESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 83 ~M~~dI~~~~-~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
...++++.+. +.|+.||.+|.-.....+|-+....+.++|. ++++.+|-.
T Consensus 104 ~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 104 DAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp HHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCC
Confidence 3445666665 5799999988643233566678888888886 799999964
No 367
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=70.63 E-value=8.3 Score=32.21 Aligned_cols=78 Identities=10% Similarity=-0.045 Sum_probs=47.7
Q ss_pred ceeEEEecCHHHHHHH----HHcCCC-EEEecC---CCCCCCC----CC--CHHHHHHHHhhCCCcEEEEEccCCCCCcc
Q psy7930 10 TTLEVCVDSVASALAA----VRGGAD-RLELCA---ALSEGGL----TP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A----~~~GAd-RIELc~---~l~~GGl----TP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~ 75 (146)
+++-|+-.++++-..+ ++.|++ -|||+- +-. ||- .| -..+++.+++.+++||.|=||| -
T Consensus 131 vivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~-G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p-~----- 203 (345)
T 3oix_A 131 HFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP-GXPQIAYDFETTDQILSEVFTYFTKPLGIKLPP-Y----- 203 (345)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST-TCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECC-C-----
T ss_pred EEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC-CchhhcCCHHHHHHHHHHHHHHhCCCeEEEECC-C-----
Confidence 3566676777665443 345876 999984 222 431 11 1345666667778999999999 2
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCEEE
Q psy7930 76 FSQAEKEIMALDCHQFVESGADGFV 100 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~GadG~V 100 (146)
++..|+..+ +.++|++|+.
T Consensus 204 ~~~~~~a~~------~~~aga~~i~ 222 (345)
T 3oix_A 204 FDIVHFDQA------AAIFNXYPLT 222 (345)
T ss_dssp CCHHHHHHH------HHHHTTSCCS
T ss_pred CCHHHHHHH------HHHhCCCceE
Confidence 356665543 3445676654
No 368
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=70.62 E-value=12 Score=27.27 Aligned_cols=40 Identities=15% Similarity=0.282 Sum_probs=28.9
Q ss_pred HHHHcCCCEEEEe-eecCCCCcC------HHHHHHHHHHhCCCCeEEe
Q psy7930 90 QFVESGADGFVIG-ALTGEQEID------IEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 90 ~~~~~GadG~VfG-~L~~dg~iD------~~~~~~Li~~a~~~~vtFH 130 (146)
.+++.++++||+| .++-||+.- ....++|-+.. ++|+.|+
T Consensus 48 li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~-~lpV~~~ 94 (138)
T 1nu0_A 48 LLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLH 94 (138)
T ss_dssp HHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHH-CCCEEEE
T ss_pred HHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence 3456799999999 477799887 55555555443 6888875
No 369
>1fcq_A Hyaluronoglucosaminidase; 7-stranded (beta/alpha) TIM barrel, glycosidase family 56, allergen, hydrolase; 1.60A {Apis mellifera} SCOP: c.1.8.9 PDB: 1fcu_A 1fcv_A* 2j88_A
Probab=70.54 E-value=2.1 Score=36.57 Aligned_cols=57 Identities=21% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCcEEEEEccCCCCC--c-ccCHHHHHHHHHHHHHHHHcCCCEEEE-eeecCCCCcCHHHHHHHHHH
Q psy7930 59 LVPVFVMIRVRAGFD--F-VFSQAEKEIMALDCHQFVESGADGFVI-GALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 59 ~ipv~vMIRP~R~gd--F-~Ys~~E~~~M~~dI~~~~~~GadG~Vf-G~L~~dg~iD~~~~~~Li~~ 121 (146)
.+||++..|| ...| . .+|.++ +...|...+.+||+|||+ |-.. ..=.++.|..|-+-
T Consensus 259 ~~PV~~Y~r~-~Y~d~~~~fLS~~D---L~~TigesaalGa~GiViWGss~--~~~s~~~C~~l~~Y 319 (350)
T 1fcq_A 259 RKKVLPYYWY-KYQDRRDTDLSRAD---LEATLRKITDLGADGFIIWGSSD--DINTKAKCLQFREY 319 (350)
T ss_dssp CCEECCEEES-EETTEEEEECCHHH---HHHHHHHHHHTTCSEEEEECCGG--GSSSHHHHHHHHHH
T ss_pred CCceEEeEee-EecCCccccccHHH---HHHHHHHHHHcCCCeEEEecccc--cccCHHHHHHHHHH
Confidence 6999999999 5542 2 345555 457889999999999998 3322 23445666666543
No 370
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=70.48 E-value=14 Score=31.32 Aligned_cols=55 Identities=15% Similarity=-0.019 Sum_probs=37.3
Q ss_pred hCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHH
Q psy7930 57 LVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 57 ~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~ 120 (146)
..++.+.+.+ | . .|.-+++|| ...-|..+.++|++.+|||. ++ ..|...+.+.++
T Consensus 111 ~~GvD~viel-p--F-~~~~s~~~F--v~~~v~ll~~l~~~~iv~G~-~~--~~~~~~~~~~i~ 165 (357)
T 3gmi_A 111 RAGADIVVEG-P--P-MGIMGSGQY--MRCLIKMFYSLGAEIIPRGY-IP--EKTMEKVIDCIN 165 (357)
T ss_dssp HHTCSEEEEC-C--C-GGGSCHHHH--HHHHHHHHHHHTCCEEEEEE-CC--CHHHHHHHHHHH
T ss_pred HCCCCEEEEc-C--c-hhhCCHHHH--HHHHHHHHHHcCCCEEEECC-CC--chhHHHHHHHHh
Confidence 3477774444 4 1 366778887 45557788899999999999 44 455555555554
No 371
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=70.41 E-value=15 Score=32.20 Aligned_cols=47 Identities=15% Similarity=0.294 Sum_probs=39.8
Q ss_pred hCCCcEEEEEccCCCCCcccC-HHHHHHHHHHHHHHHHcCCCEEEEeeecCC
Q psy7930 57 LVLVPVFVMIRVRAGFDFVFS-QAEKEIMALDCHQFVESGADGFVIGALTGE 107 (146)
Q Consensus 57 ~~~ipv~vMIRP~R~gdF~Ys-~~E~~~M~~dI~~~~~~GadG~VfG~L~~d 107 (146)
..+|-...-|.| |-|++|| ++|++.+++=++.+.++|++.|-+ |-+|
T Consensus 69 ~~~V~Fv~aisP--G~di~~s~~~d~~~L~~K~~ql~~lGVr~FaI--lfDD 116 (447)
T 2xsa_A 69 ARGMVFYVSLAP--CLDVTYSDPQDRAALLARVDQLARAGLRNLVL--LFDD 116 (447)
T ss_dssp TTTCEEEEEECC--CSSCCTTCHHHHHHHHHHHHHHHHTTCCEEEE--ECSS
T ss_pred HcCCEEEEEeCC--CcccCCCCHHHHHHHHHHHHHHHHhCCCEEEE--eccC
Confidence 358999999999 8899995 678999999999999999998654 4444
No 372
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=70.13 E-value=17 Score=27.38 Aligned_cols=76 Identities=16% Similarity=0.107 Sum_probs=41.9
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCC-cEEEE--EccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLV-PVFVM--IRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~i-pv~vM--IRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+..+.+.|++-+- .+..+| .-++.+++..+. ++.|- ||| .++ ++..+.++|+|+
T Consensus 125 ~~~a~~~G~~G~~------~~~~~~--~~i~~lr~~~~~~~~iv~gGI~~-~g~--------------~~~~~~~aGad~ 181 (208)
T 2czd_A 125 IEVANEIEPFGVI------APGTRP--ERIGYIRDRLKEGIKILAPGIGA-QGG--------------KAKDAVKAGADY 181 (208)
T ss_dssp HHHHHHHCCSEEE------CCCSST--HHHHHHHHHSCTTCEEEECCCCS-STT--------------HHHHHHHHTCSE
T ss_pred HHHHHHhCCcEEE------ECCCCh--HHHHHHHHhCCCCeEEEECCCCC-CCC--------------CHHHHHHcCCCE
Confidence 4466777877653 233443 445666776653 32211 244 332 378888999999
Q ss_pred EEEee-ecCCCCcCHHHHHHHHHH
Q psy7930 99 FVIGA-LTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 99 ~VfG~-L~~dg~iD~~~~~~Li~~ 121 (146)
+|+|= +..... =.++.+++.+.
T Consensus 182 vvvGr~I~~a~d-p~~~~~~l~~~ 204 (208)
T 2czd_A 182 IIVGRAIYNAPN-PREAAKAIYDE 204 (208)
T ss_dssp EEECHHHHTSSS-HHHHHHHHHHH
T ss_pred EEEChHHhcCCC-HHHHHHHHHHH
Confidence 99982 332211 13455555543
No 373
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=70.07 E-value=41 Score=27.38 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=61.6
Q ss_pred cccceeEEEecCHHHHHHHHHcCCCEEEecC-CCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 7 WNKTTLEVCVDSVASALAAVRGGADRLELCA-ALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 7 ~~~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
-+..++|| -|.+++..|.+.||+=|=.+. || .-++.+......+.....-.+ +.|-- +| .+|.
T Consensus 153 Gl~~LvEV--h~~~El~rAl~~~a~iIGINNRnL--~tf~vdl~~t~~L~~~ip~~~-~~VsE--SG--I~t~------- 216 (258)
T 4a29_A 153 GMEPLILI--NDENDLDIALRIGARFIGIMSRDF--ETGEINKENQRKLISMIPSNV-VKVAK--LG--ISER------- 216 (258)
T ss_dssp TCCCEEEE--SSHHHHHHHHHTTCSEEEECSBCT--TTCCBCHHHHHHHHTTSCTTS-EEEEE--ES--SCCH-------
T ss_pred hHHHHHhc--chHHHHHHHhcCCCcEEEEeCCCc--cccccCHHHHHHHHhhCCCCC-EEEEc--CC--CCCH-------
Confidence 34567775 789999999999999998875 54 456777777777666542111 22322 34 2333
Q ss_pred HHHHHHHHcCCCEEEEee-ecCCCCcCHHHHHHHHH
Q psy7930 86 LDCHQFVESGADGFVIGA-LTGEQEIDIEFIRQLKT 120 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~-L~~dg~iD~~~~~~Li~ 120 (146)
+|++.++++|+|||.+|= |-.+. | ..++|++
T Consensus 217 ~dv~~l~~~G~~a~LVGealmr~~--d--~~~~Li~ 248 (258)
T 4a29_A 217 NEIEELRKLGVNAFLISSSLMRNP--E--KIKELIE 248 (258)
T ss_dssp HHHHHHHHTTCCEEEECHHHHHCT--T--HHHHHHC
T ss_pred HHHHHHHHCCCCEEEECHHHhCCC--c--HHHHHHc
Confidence 578888999999999992 22111 2 4667765
No 374
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=70.03 E-value=9.5 Score=32.07 Aligned_cols=55 Identities=24% Similarity=0.208 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeecC-CCCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVIGALTG-EQEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~VfG~L~~-dg~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
+.+|++.|.+-++.+.+.|+.||-.+.--. ...++.+.+.++.+.++ +..+++|-
T Consensus 162 ~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~ 219 (480)
T 3gip_A 162 TAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHI 219 (480)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 689999999999999999999998873222 22367777888877775 67788886
No 375
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=69.47 E-value=3.4 Score=32.78 Aligned_cols=49 Identities=16% Similarity=0.188 Sum_probs=37.8
Q ss_pred HHHHHHHHH-HcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 84 MALDCHQFV-ESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 84 M~~dI~~~~-~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
..+.++.+. +.|+.||-+|.--.+..+|-+....+.++|. ++++.+|-.
T Consensus 125 a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~ 176 (336)
T 2wm1_A 125 AVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPW 176 (336)
T ss_dssp HHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCC
Confidence 346677666 5799999988655455677788889988886 899999964
No 376
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=69.43 E-value=6 Score=31.04 Aligned_cols=79 Identities=13% Similarity=0.095 Sum_probs=44.7
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHH-----HHHHHHHHHH-H-HH
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAE-----KEIMALDCHQ-F-VE 93 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E-----~~~M~~dI~~-~-~~ 93 (146)
+.++.+.|++||=|.+- .|+. .+.++...+..++.|...--. +. +++.+ -+.+.+-++. + ..
T Consensus 109 ~~al~~~g~~rvglltp-----y~~~~~~~~~~~l~~~Giev~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 178 (240)
T 3ixl_A 109 LNGLRALGVRRVALATA-----YIDDVNERLAAFLAEESLVPTGCRSL----GI-TGVEAMARVDTATLVDLCVRAFEAA 178 (240)
T ss_dssp HHHHHHTTCSEEEEEES-----SCHHHHHHHHHHHHHTTCEEEEEEEC----CC-CCHHHHHTCCHHHHHHHHHHHHHTS
T ss_pred HHHHHHhCCCEEEEEeC-----ChHHHHHHHHHHHHHCCCEEeccccC----CC-CCcchhhcCCHHHHHHHHHHHhhcC
Confidence 34455669999999542 1222 345545555568876443322 11 22222 2244455555 5 66
Q ss_pred cCCCEEEEeeecCCCCcC
Q psy7930 94 SGADGFVIGALTGEQEID 111 (146)
Q Consensus 94 ~GadG~VfG~L~~dg~iD 111 (146)
-|+|++|+|| |.=..++
T Consensus 179 ~~adaivL~C-T~l~~l~ 195 (240)
T 3ixl_A 179 PDSDGILLSS-GGLLTLD 195 (240)
T ss_dssp TTCSEEEEEC-TTSCCTT
T ss_pred CCCCEEEEeC-CCCchhh
Confidence 7999999998 6555555
No 377
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=69.37 E-value=8.5 Score=38.57 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=48.5
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCC------------CCCHHHHHHHHhhC-------CCcEEEEEccCCCCCcccC
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGL------------TPTLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGl------------TPS~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys 77 (146)
...+.|..++++|||-|-+ ++.. ||+ .|....+.++.+.+ ++||.+. || ..-.
T Consensus 1040 gi~~~A~~a~kAGAD~IvV-sG~e-GGTgasp~~~~~~~GlPt~~aL~ev~~al~~~glr~~IpVIAd-----GG-IrtG 1111 (1520)
T 1ofd_A 1040 GIGTIAAGVAKANADIIQI-SGHD-GGTGASPLSSIKHAGSPWELGVTEVHRVLMENQLRDRVLLRAD-----GG-LKTG 1111 (1520)
T ss_dssp THHHHHHHHHHTTCSEEEE-ECTT-CCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHTTCGGGCEEEEE-----SS-CCSH
T ss_pred ChHHHHHHHHHcCCCEEEE-eCCC-CccCCCcchhhcCCchhHHHHHHHHHHHHHhcCCCCCceEEEE-----CC-CCCH
Confidence 4577899999999999976 3333 553 35566666665543 4666542 33 3322
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
.|+..+..+||++|-+|
T Consensus 1112 --------~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1112 --------WDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp --------HHHHHHHHTTCSEEECS
T ss_pred --------HHHHHHHHcCCCeeEEc
Confidence 78889999999999998
No 378
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=69.14 E-value=2.1 Score=37.57 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=29.8
Q ss_pred CCCcEEEEEccCCC-CC-cccCHHHHHHHHHHHHHHHHcCCCEEEE
Q psy7930 58 VLVPVFVMIRVRAG-FD-FVFSQAEKEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 58 ~~ipv~vMIRP~R~-gd-F~Ys~~E~~~M~~dI~~~~~~GadG~Vf 101 (146)
..+||++..|| .. .. -.+|.+| +...|...+++||+|||+
T Consensus 260 ~~lPV~~Y~r~-~Y~~~~~fLS~~D---L~~TigesaalGa~GiVi 301 (424)
T 2pe4_A 260 PNLPVLPYVQI-FYDTTNHFLPLDE---LEHSLGESAAQGAAGVVL 301 (424)
T ss_dssp TTCCBCCEECS-BCBTSCCBCCHHH---HHTTHHHHHHTTCSEEEE
T ss_pred CCCceEEEEee-EecCccccccHHH---HHHHHHHHHHcCCCeEEE
Confidence 36899999999 43 11 1335554 457889999999999998
No 379
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=68.65 E-value=24 Score=29.19 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=43.7
Q ss_pred HHHHHHcCCCEEEecCCCCCCC-C---CC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 22 ALAAVRGGADRLELCAALSEGG-L---TP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GG-l---TP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+...++.|+|-|++-..-.... . .| ...+++.+++.+++||.+ .|++ +|.+ +++.+.+.|
T Consensus 252 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~------~GgI-~s~e-------~a~~~l~~G 317 (363)
T 3l5l_A 252 ARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS------AWGF-GTPQ-------LAEAALQAN 317 (363)
T ss_dssp HHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE------CSST-TSHH-------HHHHHHHTT
T ss_pred HHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE------eCCC-CCHH-------HHHHHHHCC
Confidence 5667788999999975211111 0 12 457788888888999753 3433 3444 344555667
Q ss_pred -CCEEEEe
Q psy7930 96 -ADGFVIG 102 (146)
Q Consensus 96 -adG~VfG 102 (146)
+|.|.||
T Consensus 318 ~aD~V~iG 325 (363)
T 3l5l_A 318 QLDLVSVG 325 (363)
T ss_dssp SCSEEECC
T ss_pred CccEEEec
Confidence 9999998
No 380
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=68.48 E-value=2.6 Score=32.51 Aligned_cols=101 Identities=18% Similarity=0.107 Sum_probs=60.0
Q ss_pred cCHHHHHH-HHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC-CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 17 DSVASALA-AVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL-VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 17 ~s~~~a~~-A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~-ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.++++.++ +.+.|.++.=+... ..- .+-.-.+++.++++-+ +--.+.|-| ... .+ +++.+.+.
T Consensus 40 ~~~~~~l~~m~~~GV~~~v~~~~-~~~-~~~n~~~~~~~~~~p~r~~~~~~v~p-~~~-----~~-------el~~~~~~ 104 (288)
T 2ffi_A 40 APLGDYLGQLRAHGFSHGVLVQP-SFL-GTDNRYLLSALQTVPGQLRGVVMLER-DVE-----QA-------TLAEMARL 104 (288)
T ss_dssp BCHHHHHHHHHHTSCCEECCBCC-GGG-TTCCHHHHHHHHHSTTTBCCBBCCCS-SCC-----HH-------HHHHHHTT
T ss_pred CCHHHHHHHHHHhCCCeEEEECC-ccc-cccHHHHHHHHHHCCCCEEEEEEeCC-CCC-----HH-------HHHHHHHC
Confidence 35566544 56789998766642 100 1223344444444332 222244667 432 33 34555567
Q ss_pred CCCEEEEeeecC-CCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 95 GADGFVIGALTG-EQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 95 GadG~VfG~L~~-dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
|+.||-++.-.. +..++.+....++++|. ++++.+|--
T Consensus 105 g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 145 (288)
T 2ffi_A 105 GVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQ 145 (288)
T ss_dssp TCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSC
T ss_pred CCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeec
Confidence 999998886443 23577788888888886 899999953
No 381
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=68.42 E-value=49 Score=27.29 Aligned_cols=97 Identities=10% Similarity=0.099 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCEEEecC------CC---------CCCCCCC------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCH
Q psy7930 20 ASALAAVRGGADRLELCA------AL---------SEGGLTP------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~------~l---------~~GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~ 78 (146)
+.+..+.+.|.+.++|.. .. ..||..| ....++.+++.++-.+.+||.. .++ |+.
T Consensus 156 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa-n~~---~~~ 231 (410)
T 2gl5_A 156 EAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEI-HSL---LGT 231 (410)
T ss_dssp HHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC-TTC---SCH
T ss_pred HHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEEC-CCC---CCH
Confidence 456777888999999974 11 1345544 3466777777765446667888 654 565
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
+|...+. +.+.++|.+-+- .+-..-|.+.+++|.+.. ++|+.
T Consensus 232 ~~ai~~~---~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~-~iPIa 273 (410)
T 2gl5_A 232 NSAIQFA---KAIEKYRIFLYE----EPIHPLNSDNMQKVSRST-TIPIA 273 (410)
T ss_dssp HHHHHHH---HHHGGGCEEEEE----CSSCSSCHHHHHHHHHHC-SSCEE
T ss_pred HHHHHHH---HHHHhcCCCeEE----CCCChhhHHHHHHHHhhC-CCCEE
Confidence 5544433 445566655321 111234788888887654 45554
No 382
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=67.59 E-value=13 Score=30.82 Aligned_cols=95 Identities=14% Similarity=0.107 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCC---CCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 20 ASALAAVRGGADRLELCAALSE---GGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~---GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
.++..|.+.|||-|...=|+.. |-..--...|+.+++.++-|+.-||=+ ++ + .+++|+.. =.+.+.++||
T Consensus 130 ~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlE-t~--~-Lt~eei~~---A~~ia~eaGA 202 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILE-TS--Q-LTADEIIA---GCVLSSLAGA 202 (288)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECC-GG--G-CCHHHHHH---HHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEE-CC--C-CCHHHHHH---HHHHHHHcCC
Confidence 5788899999999998766432 444445567777888776665555555 33 2 46777553 4567889999
Q ss_pred CEEEEe--eecCCCC-cCHHHHHHHHHH
Q psy7930 97 DGFVIG--ALTGEQE-IDIEFIRQLKTI 121 (146)
Q Consensus 97 dG~VfG--~L~~dg~-iD~~~~~~Li~~ 121 (146)
|-|=.. +-+..-+ =|...|++.++.
T Consensus 203 DfVKTSTGf~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 203 DYVKTSTGFNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp SEEECCCSSSSCCCCHHHHHHHHHHHHH
T ss_pred CEEEcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 965432 2111111 166677777653
No 383
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=67.50 E-value=1.4 Score=45.16 Aligned_cols=88 Identities=18% Similarity=0.260 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCEE--EecCCCCCCCC-------CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRL--ELCAALSEGGL-------TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 20 ~~a~~A~~~GAdRI--ELc~~l~~GGl-------TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
..++.+++.|+|-+ =...+.+.||- ||...++.++++.++|||.+ +|+|.=. +++..
T Consensus 714 ~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipvia------aGGi~dg--------~~~~a 779 (2051)
T 2uv8_G 714 SQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIF------GSGFGSA--------DDTYP 779 (2051)
T ss_dssp HHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEE------ESSCCSH--------HHHTH
T ss_pred HHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEE------eCCCCCH--------HHHHH
Confidence 34566777799984 23346777774 44556789999999999864 5556532 45555
Q ss_pred HH-----------HcCCCEEEEe---eecCCCCcCHHHHHHHHHH
Q psy7930 91 FV-----------ESGADGFVIG---ALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 91 ~~-----------~~GadG~VfG---~L~~dg~iD~~~~~~Li~~ 121 (146)
+. .+|||||-+| ..+.+-.+....=+.++++
T Consensus 780 aL~g~w~~~~g~~~lgadGv~~GTrf~~t~Ea~~~~~~K~~iv~a 824 (2051)
T 2uv8_G 780 YLTGEWSTKFDYPPMPFDGFLFGSRVMIAKEVKTSPDAKKCIAAC 824 (2051)
T ss_dssp HHHTCGGGTTTCCCCCCSCEECSGGGTTSTTSCCCHHHHHHHHTC
T ss_pred HHccccccccCccCCCCceeeechHHHhCcccccCHHHHHHHHhC
Confidence 55 7999999999 3466666776655555553
No 384
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=67.50 E-value=5.8 Score=34.07 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=42.9
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCC----------CCCHHHHHHH---HhhCCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGL----------TPTLGLYRVI---KRLVLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGl----------TPS~g~i~~~---~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
.+.+++..+. |||.|-+. ...|.. .|....+..+ .+..++||.. - || ..++
T Consensus 277 ~~~~~a~~l~--G~d~v~vg--~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~vpVia---~--GG-i~~~------ 340 (486)
T 2cu0_A 277 ANPKAVDDLT--FADAVKVG--IGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIA---D--GG-IRYS------ 340 (486)
T ss_dssp CCHHHHTTCT--TSSEEEEC--SSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHTCEEEE---E--SC-CCSH------
T ss_pred CCHHHHHHhh--CCCeEEEe--eeeccceeeeEEeecCcchHHHHHHHHHHHHHcCCcEEe---c--CC-CCCH------
Confidence 3788887777 99999982 111110 2333444443 3444787643 1 32 4433
Q ss_pred HHHHHHHHHHcCCCEEEEeee
Q psy7930 84 MALDCHQFVESGADGFVIGAL 104 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG~L 104 (146)
.||..+..+|||++.+|-.
T Consensus 341 --~di~kalalGA~~v~~g~~ 359 (486)
T 2cu0_A 341 --GDIVKAIAAGADAVMLGNL 359 (486)
T ss_dssp --HHHHHHHHTTCSEEEESTT
T ss_pred --HHHHHHHHcCCCceeeChh
Confidence 6777788899999999953
No 385
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=67.39 E-value=50 Score=26.95 Aligned_cols=103 Identities=16% Similarity=0.110 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCCEEEecCCC------CCCC----CCCCHHHHHHHH---hhC-CCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAAL------SEGG----LTPTLGLYRVIK---RLV-LVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l------~~GG----lTPS~g~i~~~~---~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.+...+++||.=|-|=+.. ..|| ++|--..+..++ +.. ..+..|+=|- -.+.- ..-++...
T Consensus 98 ~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRt---da~~a-~~g~~~ai 173 (295)
T 1s2w_A 98 RLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARV---EAFIA-GWGLDEAL 173 (295)
T ss_dssp HHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEE---CTTTT-TCCHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEee---hHHhc-cccHHHHH
Confidence 44556678899988775543 1233 888665555444 332 4567667664 11210 11278899
Q ss_pred HHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC-CCCeEEe
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG-DRPITFH 130 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~-~~~vtFH 130 (146)
++.+.+.++|||++++=+ +.-|.+..+++.+..+ +.|+...
T Consensus 174 ~Ra~ay~eAGAd~i~~e~----~~~~~~~~~~i~~~~~~~~P~i~~ 215 (295)
T 1s2w_A 174 KRAEAYRNAGADAILMHS----KKADPSDIEAFMKAWNNQGPVVIV 215 (295)
T ss_dssp HHHHHHHHTTCSEEEECC----CSSSSHHHHHHHHHHTTCSCEEEC
T ss_pred HHHHHHHHcCCCEEEEcC----CCCCHHHHHHHHHHcCCCCCEEEe
Confidence 999999999999999832 1234567788888775 4777554
No 386
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=67.18 E-value=52 Score=27.12 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=66.6
Q ss_pred HHHHHHHHcCCCEEEecCCC--------CCCCCCCCHHHHHHHHh---h---CCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAAL--------SEGGLTPTLGLYRVIKR---L---VLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l--------~~GGlTPS~g~i~~~~~---~---~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.+...++.||.-|-|=+.. .-.-+-|.-..+..++. . .+.+..++-|- .. |. ...++.-.
T Consensus 99 ~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ART--Da-~~--~~gldeAi 173 (302)
T 3fa4_A 99 RTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIART--DS-LQ--THGYEESV 173 (302)
T ss_dssp HHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEE--CC-HH--HHCHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEe--cc-cc--cCCHHHHH
Confidence 34555678899998886543 11224454444444443 2 26788888887 22 32 34466666
Q ss_pred HHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEee
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
+=.+.+.++|||++-+=.+ -|.+.++++.+..++.|+....
T Consensus 174 ~Ra~ay~eAGAD~ifi~g~-----~~~~ei~~~~~~~~~~Pl~~n~ 214 (302)
T 3fa4_A 174 ARLRAARDAGADVGFLEGI-----TSREMARQVIQDLAGWPLLLNM 214 (302)
T ss_dssp HHHHHHHTTTCSEEEETTC-----CCHHHHHHHHHHTTTSCEEEEC
T ss_pred HHHHHHHHcCCCEEeecCC-----CCHHHHHHHHHHhcCCceeEEE
Confidence 7778888999999876433 4778899999988777776553
No 387
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=67.03 E-value=16 Score=30.49 Aligned_cols=62 Identities=19% Similarity=0.227 Sum_probs=41.5
Q ss_pred CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee----ecCCCCcCHHHHHHHHHHh
Q psy7930 47 TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA----LTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 47 S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~----L~~dg~iD~~~~~~Li~~a 122 (146)
+...++.+++..++||.+= | +.+. +|++.+.++|+|+|+++- -.+.+..+.+.+.++.+..
T Consensus 213 ~~~~i~~i~~~~~~Pv~vk------g--v~t~-------e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~~~l~~v~~~~ 277 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVK------G--LLSA-------EDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT 277 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEE------E--ECCH-------HHHHHHHHTTCSEEEECCGGGTSCTTCCCGGGTHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCEEEE------e--cCcH-------HHHHHHHHcCCCEEEEcCCCCCcCCCCcCHHHHHHHHHHHc
Confidence 4668888999899998652 1 1222 578899999999999942 1112334566777777665
Q ss_pred C
Q psy7930 123 G 123 (146)
Q Consensus 123 ~ 123 (146)
+
T Consensus 278 ~ 278 (380)
T 1p4c_A 278 G 278 (380)
T ss_dssp C
T ss_pred C
Confidence 4
No 388
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=66.99 E-value=2.9 Score=34.53 Aligned_cols=88 Identities=19% Similarity=0.181 Sum_probs=56.0
Q ss_pred cceeEEEecCHH-----HHHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-------CCcEEEEEccCCCCCcc
Q psy7930 9 KTTLEVCVDSVA-----SALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-------LVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 9 ~~~lEvcv~s~~-----~a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~ 75 (146)
+++||.|--+-+ -+..|.++|||-|--......||.|| ...+|+++.+.. +-++ =|-+ -|| ..
T Consensus 160 KVIlEt~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~v--gVKa-aGG-Ir 235 (281)
T 2a4a_A 160 KVIIEVGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKI--GLKV-SGG-IS 235 (281)
T ss_dssp EEECCHHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCC--EEEE-ESS-CC
T ss_pred EEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCc--eEEE-eCC-CC
Confidence 446777776633 45678899999999999888888888 567888776422 3333 3345 455 44
Q ss_pred cCHHHHHHHHHHHHHHHHcCC-----CEEEEee
Q psy7930 76 FSQAEKEIMALDCHQFVESGA-----DGFVIGA 103 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~Ga-----dG~VfG~ 103 (146)
|.++...|.+-... .+|. +-|=||.
T Consensus 236 -t~e~al~~i~aga~--~lG~~w~~~~~~RiGt 265 (281)
T 2a4a_A 236 -DLNTASHYILLARR--FLSSLACHPDNFRIGS 265 (281)
T ss_dssp -SHHHHHHHHHHHHH--HTC------CCEEEEE
T ss_pred -CHHHHHHHHHHhhh--hccccccccCceEEec
Confidence 77777666643322 2344 4566675
No 389
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=66.84 E-value=5 Score=33.19 Aligned_cols=52 Identities=21% Similarity=0.184 Sum_probs=40.4
Q ss_pred HHHHHHHHHH-HHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeecc
Q psy7930 82 EIMALDCHQF-VESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAF 133 (146)
Q Consensus 82 ~~M~~dI~~~-~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAF 133 (146)
+.-.++|+.+ +++|+.||.+-.....+.+|-+.+..+.++|. +++|.+|-..
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~~d~~~~p~~~~~~e~g~pV~iH~g~ 195 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAP 195 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBTTBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCCCCCCCccHHHHHHHHHhcCCeEEEecCC
Confidence 3455778875 57999999987544456788888899988886 8999999753
No 390
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=66.81 E-value=54 Score=27.14 Aligned_cols=106 Identities=14% Similarity=0.065 Sum_probs=72.6
Q ss_pred cccceeEEEecCHHHHHHHHHcCCCEEEecC--------CCCCCCCCCC---HH-HHHHHHhh---C-CCcEEEEEccCC
Q psy7930 7 WNKTTLEVCVDSVASALAAVRGGADRLELCA--------ALSEGGLTPT---LG-LYRVIKRL---V-LVPVFVMIRVRA 70 (146)
Q Consensus 7 ~~~~~lEvcv~s~~~a~~A~~~GAdRIELc~--------~l~~GGlTPS---~g-~i~~~~~~---~-~ipv~vMIRP~R 70 (146)
-+++++=+.+.+-=+|+.|+++|||-|=.-+ .-++.|+.|= -+ +++..++. + ++||..=+-+
T Consensus 26 ~~~~iig~gaGtGlsAk~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~~iPV~Agv~~-- 103 (286)
T 2p10_A 26 AGEPIIGGGAGTGLSAKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNG-- 103 (286)
T ss_dssp TTCCEEEEEESSHHHHHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECT--
T ss_pred cCCceEEEecccchhhHHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCCCCCEEEEECC--
Confidence 5678999999999999999999999987643 2356777772 22 33333332 3 7999988876
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecC--------------CCCcCHHHHHHHHHHhCC
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTG--------------EQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~--------------dg~iD~~~~~~Li~~a~~ 124 (146)
..-|...+ .=++.+|++|+.|+ .= -+ +..+-.+...+++..|+.
T Consensus 104 ~DP~~~~g-------~~Le~lk~~Gf~Gv-~N--~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~ 161 (286)
T 2p10_A 104 TDPFMVMS-------TFLRELKEIGFAGV-QN--FPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHK 161 (286)
T ss_dssp TCTTCCHH-------HHHHHHHHHTCCEE-EE--CSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred cCCCcCHH-------HHHHHHHHhCCceE-EE--CCCcccccchhhhhHhhcCCCHHHHHHHHHHHHH
Confidence 33355433 33467889999999 32 23 334556677788888874
No 391
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=66.76 E-value=50 Score=26.72 Aligned_cols=83 Identities=14% Similarity=0.209 Sum_probs=53.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
.+.+..+.+.|++.|.+.. | .| ..+++.+++ .++||.+-+. +. ++++.+.+.|+|+
T Consensus 92 ~~~~~~~~~~g~d~V~l~~-----g-~p-~~~~~~l~~-~g~~v~~~v~---------s~-------~~a~~a~~~GaD~ 147 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGA-----G-NP-TKYIRELKE-NGTKVIPVVA---------SD-------SLARMVERAGADA 147 (326)
T ss_dssp HHHHHHHHHTTCSEEEEES-----S-CC-HHHHHHHHH-TTCEEEEEES---------SH-------HHHHHHHHTTCSC
T ss_pred HHHHHHHHHCCCCEEEECC-----C-Cc-HHHHHHHHH-cCCcEEEEcC---------CH-------HHHHHHHHcCCCE
Confidence 3566778899999999843 3 34 677777765 4777766542 22 3445577899999
Q ss_pred EEE-eeecCCC----CcCHHHHHHHHHHhCCCCe
Q psy7930 99 FVI-GALTGEQ----EIDIEFIRQLKTIIGDRPI 127 (146)
Q Consensus 99 ~Vf-G~L~~dg----~iD~~~~~~Li~~a~~~~v 127 (146)
|++ |. ...| ..+.+.+.++.+.. +.|+
T Consensus 148 i~v~g~-~~GG~~G~~~~~~ll~~i~~~~-~iPv 179 (326)
T 3bo9_A 148 VIAEGM-ESGGHIGEVTTFVLVNKVSRSV-NIPV 179 (326)
T ss_dssp EEEECT-TSSEECCSSCHHHHHHHHHHHC-SSCE
T ss_pred EEEECC-CCCccCCCccHHHHHHHHHHHc-CCCE
Confidence 999 42 1122 35666666666543 3444
No 392
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=66.71 E-value=43 Score=26.40 Aligned_cols=102 Identities=14% Similarity=0.059 Sum_probs=52.1
Q ss_pred HHHHHHcCCCEEEecCCCC-CCCCCCCHHHHHHHHhhCC--CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 22 ALAAVRGGADRLELCAALS-EGGLTPTLGLYRVIKRLVL--VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~-~GGlTPS~g~i~~~~~~~~--ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+..+.++|...+.-..++. ..|+. +...+..+.+... +.+.++.-| ..+.+ +..|.. +-++.+.+.|++
T Consensus 111 ~~~~l~~GvTtv~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~---~~~~~~~~~g~~- 182 (403)
T 2qt3_A 111 AHMQVLHGTLYTRTHVDVDSVAKTK-AVEAVLEAKEELKDLIDIQVVAFA-QSGFF--VDLESE---SLIRKSLDMGCD- 182 (403)
T ss_dssp HHHHHHTTEEEEEEEEECSTTTTTH-HHHHHHHHHHHHTTTCEEEEEEEC-TTCTT--TSTTHH---HHHHHHHHTTCS-
T ss_pred HHHHHHcCCcEEEEEEcccCccccc-hHHHHHHHHHHhhcceeEEEEEcC-Ccccc--cCcchH---HHHHHHHhcCCC-
Confidence 5566778888764322221 12222 2222333333221 233344445 44422 333333 334556677875
Q ss_pred EEEeeecCCC--CcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 99 FVIGALTGEQ--EIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 99 ~VfG~L~~dg--~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+ +|.+.+.. ....+.++++++.|+ ++++++|-.
T Consensus 183 ~-~~~~~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~ 219 (403)
T 2qt3_A 183 L-VGGVDPATRENNVEGSLDLCFKLAKEYDVDIDYHIH 219 (403)
T ss_dssp E-EECBCTTTTTSCHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred e-EEEecCCCCCCChHHHHHHHHHHHHHcCCCeEEEeC
Confidence 3 34344432 344588888888875 899999953
No 393
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=66.61 E-value=13 Score=31.12 Aligned_cols=102 Identities=23% Similarity=0.250 Sum_probs=68.1
Q ss_pred ccceeEEEecCHHH-----HHHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhC-----------CC------cEEE
Q psy7930 8 NKTTLEVCVDSVAS-----ALAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLV-----------LV------PVFV 64 (146)
Q Consensus 8 ~~~~lEvcv~s~~~-----a~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~-----------~i------pv~v 64 (146)
-+++||.|.-+-++ +..|.++|||-|--......||.|| ...+|+++.+.. ++ .-.+
T Consensus 153 lKVIlEt~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~v 232 (297)
T 4eiv_A 153 LKVVLSGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCI 232 (297)
T ss_dssp EEEECCSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC------------------CC
T ss_pred eEEEEecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCce
Confidence 46788988875433 4667889999999999999899888 567777766311 11 2345
Q ss_pred EEccCC-CCCcccCHHHHHHHHHHHHHHHHcC-----CCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 65 MIRVRA-GFDFVFSQAEKEIMALDCHQFVESG-----ADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 65 MIRP~R-~gdF~Ys~~E~~~M~~dI~~~~~~G-----adG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
=|.+ - || +=|-++...|.+-++. +| ++-|-||+=. ..+++|....
T Consensus 233 gvKA-s~GG--Irt~e~A~~~i~~~~e---lG~~wl~~~~fRiGaSs-------~ll~el~~~~ 283 (297)
T 4eiv_A 233 GIKI-EVGD--VHMAETADFLMQMIFE---NGPRSIVRDKFRVGGGF-------NLLKELRDCY 283 (297)
T ss_dssp EEEE-ECTT--CCHHHHHHHHHHHHHH---HCGGGCSTTTEEEEECH-------HHHHHHHHHH
T ss_pred eEEe-cCCC--CCCHHHHHHHHHHHHH---hCccccCCCceEecccH-------HHHHHHHHHH
Confidence 6778 6 55 4455566666655554 66 7789999854 4566665543
No 394
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=66.20 E-value=34 Score=26.76 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=61.4
Q ss_pred cCHHHHH-HHHHcCCCEEEecCCCCCCCC-CCCHHHHHHHHhhC-C-CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHH
Q psy7930 17 DSVASAL-AAVRGGADRLELCAALSEGGL-TPTLGLYRVIKRLV-L-VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFV 92 (146)
Q Consensus 17 ~s~~~a~-~A~~~GAdRIELc~~l~~GGl-TPS~g~i~~~~~~~-~-ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~ 92 (146)
.++++.+ .+.+.|.++.=+...-. ..+ ..+...+.++.+.. + +--.+.|-| ... + ...++++.++
T Consensus 47 ~~~e~~l~~md~~GV~~~V~~~~~~-~~~~~~~N~~~~~~~~~~p~r~~~~~~v~p-~~~-----~----~a~~eL~~~~ 115 (291)
T 3irs_A 47 KSLELMFEEMAAAGIEQGVCVGRNS-SVLGSVSNADVAAVAKAYPDKFHPVGSIEA-ATR-----K----EAMAQMQEIL 115 (291)
T ss_dssp TCHHHHHHHHHHTTCCEEEEECCEE-TTTEECCHHHHHHHHHHSTTTEEEEEECCC-SSH-----H----HHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEcCCCc-cccccccHHHHHHHHHHCCCcEEEEEecCc-cCH-----H----HHHHHHHHHH
Confidence 3555554 45678999988875321 001 12344444444333 2 323345677 321 2 2234455567
Q ss_pred HcCCCEEEEee-ec-CCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 93 ESGADGFVIGA-LT-GEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 93 ~~GadG~VfG~-L~-~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+.|+.||-+-. .. .+..+|.+....+.++|. ++++.+|-.
T Consensus 116 ~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~ 159 (291)
T 3irs_A 116 DLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTG 159 (291)
T ss_dssp HTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECS
T ss_pred hCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCC
Confidence 89999987752 11 234577788899998886 899999964
No 395
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=65.76 E-value=49 Score=26.51 Aligned_cols=113 Identities=13% Similarity=-0.011 Sum_probs=58.7
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccC----CCC----Cc-ccC-HHHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVR----AGF----DF-VFS-QAEKEIMALDCH 89 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~----R~g----dF-~Ys-~~E~~~M~~dI~ 89 (146)
.+..+.++|..-++-.......++.+. ...+.++.+..++...+...+- +.| ++ .-+ ++.++.+.+-++
T Consensus 114 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 193 (456)
T 3ls9_A 114 VLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLID 193 (456)
T ss_dssp HHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHH
Confidence 344568889988876533333333222 2223333344455544433220 011 11 112 333344443333
Q ss_pred HHHHcCCCEEEEeeecCC--CCcCHHHHHHHHHHhC--CCCeEEeecc
Q psy7930 90 QFVESGADGFVIGALTGE--QEIDIEFIRQLKTIIG--DRPITFHRAF 133 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~d--g~iD~~~~~~Li~~a~--~~~vtFHRAF 133 (146)
.+...+.+|.+-..+.+. ...+.+.++++++.|+ ++++++|-.=
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 194 QYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp HHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 333322255554445554 4688999999999987 8999999743
No 396
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=65.44 E-value=39 Score=28.06 Aligned_cols=44 Identities=16% Similarity=0.021 Sum_probs=31.3
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEE
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFV 64 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~v 64 (146)
..+.+..+.++|..+|=-++ ..|++-+...+.++.+..++.|++
T Consensus 88 ~~~~l~~~~~aGv~tiV~~t---~~g~gr~~~~l~~la~~~gv~i~~ 131 (364)
T 3k2g_A 88 AIAEVKQFAAVGGRSIVDPT---CRGIGRDPVKLRRISAETGVQVVM 131 (364)
T ss_dssp HHHHHHHHHHTTCCEEEECC---CBTTTCCHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHhcCCCeEEEeC---CCcccCCHHHHHHHHHHhCCcEEE
Confidence 44666778899999887665 356667888888777776655543
No 397
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=64.94 E-value=24 Score=29.83 Aligned_cols=66 Identities=15% Similarity=0.079 Sum_probs=41.9
Q ss_pred HHHHHHcC------CCEEEecCCCCCC-CCCC---------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 22 ALAAVRGG------ADRLELCAALSEG-GLTP---------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 22 a~~A~~~G------AdRIELc~~l~~G-GlTP---------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+...++.| +|-|++-.....+ -..| ...+++.+++.+++||.+ .|++ +.++.
T Consensus 266 a~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~------~G~i--~~~~a---- 333 (402)
T 2hsa_B 266 VERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFIC------SGGY--TRELG---- 333 (402)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEE------ESSC--CHHHH----
T ss_pred HHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEE------eCCC--CHHHH----
Confidence 45667789 9999997542221 1123 134677888889999753 2555 65444
Q ss_pred HHHHHHHHcC-CCEEEEe
Q psy7930 86 LDCHQFVESG-ADGFVIG 102 (146)
Q Consensus 86 ~dI~~~~~~G-adG~VfG 102 (146)
+.+.+.| +|.|.||
T Consensus 334 ---~~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 334 ---IEAVAQGDADLVSYG 348 (402)
T ss_dssp ---HHHHHTTSCSEEEES
T ss_pred ---HHHHHCCCCceeeec
Confidence 3444455 9999999
No 398
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=64.68 E-value=15 Score=30.88 Aligned_cols=82 Identities=15% Similarity=0.077 Sum_probs=49.5
Q ss_pred HHHHHHH-HcCCCEEEecCC--------------C----CCCCCCC------CHHHHHHHHhhCC-CcEEEEEccCCCCC
Q psy7930 20 ASALAAV-RGGADRLELCAA--------------L----SEGGLTP------TLGLYRVIKRLVL-VPVFVMIRVRAGFD 73 (146)
Q Consensus 20 ~~a~~A~-~~GAdRIELc~~--------------l----~~GGlTP------S~g~i~~~~~~~~-ipv~vMIRP~R~gd 73 (146)
+.|..|. ++|.|-|||..+ . .-||.+. ...+++.+++.++ -||-|=|+| -. .
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~-~~-~ 255 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISP-LN-G 255 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT-TC-C
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECc-cc-c
Confidence 4667888 999999999642 1 1245232 2456777777765 366555556 22 1
Q ss_pred cc--cCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 74 FV--FSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 74 F~--Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
|. ......+...+=++.+.++|+|.+-+..
T Consensus 256 ~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 256 VHGMIDSNPEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp GGGCCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred cccCCCCCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 11 1112334455556778889999988754
No 399
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=64.67 E-value=57 Score=26.66 Aligned_cols=108 Identities=17% Similarity=0.042 Sum_probs=66.8
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecC-CC-------CCCCCCCCHHH-H---HHHHhhCC-CcEEEEEc-cCCCCCc
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCA-AL-------SEGGLTPTLGL-Y---RVIKRLVL-VPVFVMIR-VRAGFDF 74 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l-------~~GGlTPS~g~-i---~~~~~~~~-ipv~vMIR-P~R~gdF 74 (146)
..+.=.++.++.+|+.++++|.|=| |.. ++ .-++. -+... + +.+++..+ .||. .= | .|+|
T Consensus 29 ~~i~m~tayDa~sA~l~e~aG~d~i-lvGdSl~~~~lG~~dt~~-vtldem~~h~~aV~r~~~~~~vv--aD~p--fgsY 102 (275)
T 3vav_A 29 EKIAMLTCYDASFAALLDRANVDVQ-LIGDSLGNVLQGQTTTLP-VTLDDIAYHTACVARAQPRALIV--ADLP--FGTY 102 (275)
T ss_dssp CCEEEEECCSHHHHHHHHHTTCSEE-EECTTHHHHTTCCSSSTT-CCHHHHHHHHHHHHHTCCSSEEE--EECC--TTSC
T ss_pred CcEEEEeCcCHHHHHHHHHcCCCEE-EECcHHHHHHcCCCCCCc-cCHHHHHHHHHHHHhcCCCCCEE--EecC--CCCC
Confidence 4677789999999999999999999 886 33 11222 23333 3 33334443 4543 33 5 3445
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEeec
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFHRA 132 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFHRA 132 (146)
-|.+ +.++.=.+.++ .||+||=+ +||.--.+.++.|.+ .+.|+.=|.-
T Consensus 103 -~s~~--~a~~~a~rl~k-aGa~aVkl----Edg~~~~~~i~~l~~--~GIpv~gHlg 150 (275)
T 3vav_A 103 -GTPA--DAFASAVKLMR-AGAQMVKF----EGGEWLAETVRFLVE--RAVPVCAHVG 150 (275)
T ss_dssp -SSHH--HHHHHHHHHHH-TTCSEEEE----ECCGGGHHHHHHHHH--TTCCEEEEEE
T ss_pred -CCHH--HHHHHHHHHHH-cCCCEEEE----CCchhHHHHHHHHHH--CCCCEEEecC
Confidence 3433 33444444444 59999863 466555677888875 5888888864
No 400
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=64.42 E-value=19 Score=30.26 Aligned_cols=68 Identities=18% Similarity=0.131 Sum_probs=44.3
Q ss_pred HHcCCCEEEec--CCCC-CCCCCCC---------HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 26 VRGGADRLELC--AALS-EGGLTPT---------LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 26 ~~~GAdRIELc--~~l~-~GGlTPS---------~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
.+.|||=+-+- .++. +.|.... ...++++.+.+.+|+.++= ||- ++++|..|. +.+.+
T Consensus 200 ~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~ls----gG~---~~~~fl~~v---~~A~~ 269 (332)
T 3iv3_A 200 ERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLS----AGV---SAELFQETL---VFAHK 269 (332)
T ss_dssp GGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEEC----TTC---CHHHHHHHH---HHHHH
T ss_pred cCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEEC----CCC---CHHHHHHHH---HHHHH
Confidence 35599988776 3331 1233221 1357777778899987763 342 677776665 55788
Q ss_pred cCC--CEEEEee
Q psy7930 94 SGA--DGFVIGA 103 (146)
Q Consensus 94 ~Ga--dG~VfG~ 103 (146)
.|+ .||.+|=
T Consensus 270 aGa~f~Gv~~GR 281 (332)
T 3iv3_A 270 AGAKFNGVLCGR 281 (332)
T ss_dssp HTCCCCEEEECH
T ss_pred cCCCcceEEeeH
Confidence 999 9999993
No 401
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=64.33 E-value=19 Score=27.98 Aligned_cols=61 Identities=21% Similarity=0.174 Sum_probs=36.8
Q ss_pred CCCCCCCCHHHHHHHHhhCCCcEEEEE----ccCCCCCcccCHHH-HHHHHHHHHHHHHcCCCEEEEeeecCC
Q psy7930 40 SEGGLTPTLGLYRVIKRLVLVPVFVMI----RVRAGFDFVFSQAE-KEIMALDCHQFVESGADGFVIGALTGE 107 (146)
Q Consensus 40 ~~GGlTPS~g~i~~~~~~~~ipv~vMI----RP~R~gdF~Ys~~E-~~~M~~dI~~~~~~GadG~VfG~L~~d 107 (146)
..|||| +++++++...--..+-+ |. ..| ..|.++ .+.+.+.++.+.+.|+|.+|+.|-|..
T Consensus 9 G~Gglt----v~~~l~~~~P~~~~iy~~D~~~~-pyG--~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~ 74 (254)
T 1b73_A 9 GVGGLT----VLKAIRNRYRKVDIVYLGDTARV-PYG--IRSKDTIIRYSLECAGFLKDKGVDIIVVACNTAS 74 (254)
T ss_dssp SSGGGT----HHHHHHHHSTTCEEEEEECTTTC-CCT--TSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHH
T ss_pred CccHHH----HHHHHHHhCCCCcEEEeecCCCC-CCC--cCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhh
Confidence 578987 66666665422222221 11 122 223444 455566677788899999999998765
No 402
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=64.15 E-value=47 Score=26.25 Aligned_cols=79 Identities=18% Similarity=0.154 Sum_probs=52.4
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
+.+.+++..|.++||+-|- .+|++ ..+++.++++ ++|+. | | +.|..|+. .+.++|
T Consensus 93 Vlt~~~a~~Ai~AGA~fIv------sP~~~--~~vi~~~~~~-gi~~i----p---G--v~TptEi~-------~A~~~G 147 (232)
T 4e38_A 93 ILNGEQALAAKEAGATFVV------SPGFN--PNTVRACQEI-GIDIV----P---G--VNNPSTVE-------AALEMG 147 (232)
T ss_dssp CCSHHHHHHHHHHTCSEEE------CSSCC--HHHHHHHHHH-TCEEE----C---E--ECSHHHHH-------HHHHTT
T ss_pred cCCHHHHHHHHHcCCCEEE------eCCCC--HHHHHHHHHc-CCCEE----c---C--CCCHHHHH-------HHHHcC
Confidence 5679999999999999994 24554 4567766664 77763 3 2 45676654 457899
Q ss_pred CCEEEEeeecCCCCc-CHHHHHHHHHHh
Q psy7930 96 ADGFVIGALTGEQEI-DIEFIRQLKTII 122 (146)
Q Consensus 96 adG~VfG~L~~dg~i-D~~~~~~Li~~a 122 (146)
+|-+=| .+-..+ ..+.++.|....
T Consensus 148 ad~vK~---FPa~~~gG~~~lkal~~p~ 172 (232)
T 4e38_A 148 LTTLKF---FPAEASGGISMVKSLVGPY 172 (232)
T ss_dssp CCEEEE---CSTTTTTHHHHHHHHHTTC
T ss_pred CCEEEE---CcCccccCHHHHHHHHHHh
Confidence 998866 443344 456666665433
No 403
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=63.99 E-value=13 Score=32.93 Aligned_cols=77 Identities=13% Similarity=0.044 Sum_probs=44.8
Q ss_pred HHHHHHHHcCCCEEEecCCC------------------CCCCCCCC------HHHHHHHHhhCCCcEEEEEccCCCCCcc
Q psy7930 20 ASALAAVRGGADRLELCAAL------------------SEGGLTPT------LGLYRVIKRLVLVPVFVMIRVRAGFDFV 75 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l------------------~~GGlTPS------~g~i~~~~~~~~ipv~vMIRP~R~gdF~ 75 (146)
+.|..|.++|.|=|||..+- .-|| ++- ..+++.+++.++-+.-|.||- ...+|.
T Consensus 160 ~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGG-s~enR~r~~~ei~~avr~~~g~~~~v~~r~-s~~~~~ 237 (690)
T 3k30_A 160 NAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGG-SLENRMRLLRELLEDTLDECAGRAAVACRI-TVEEEI 237 (690)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHHHTTSSEEEEEE-ECCCCS
T ss_pred HHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCC-CHHHHHHHHHHHHHHHHHHhCCCceEEEEE-CccccC
Confidence 67888999999999995431 1144 221 357777777775444556664 333333
Q ss_pred ---cCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 76 ---FSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 76 ---Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
++.+|. .+=++.+.+ |+|.+-+-
T Consensus 238 ~~g~~~~~~---~~~~~~l~~-~~d~~~v~ 263 (690)
T 3k30_A 238 DGGITREDI---EGVLRELGE-LPDLWDFA 263 (690)
T ss_dssp TTSCCHHHH---HHHHHHHTT-SSSEEEEE
T ss_pred CCCCCHHHH---HHHHHHHHh-hcCEEEEe
Confidence 344443 333444444 78876553
No 404
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=63.92 E-value=60 Score=26.70 Aligned_cols=92 Identities=7% Similarity=0.025 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC---CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP---TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP---S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
+.+..+.+.|.+.++|.. |..+ ....++.+++.++-.+.+||.. .+| |+.+|...+ ++.+.++|+
T Consensus 155 ~~a~~~~~~Gf~~vKik~-----g~~~~~~~~e~v~avR~a~G~d~~l~vDa-n~~---~~~~~a~~~---~~~l~~~~i 222 (391)
T 2qgy_A 155 RQIEKFYGKKYGGIKIYP-----MLDSLSISIQFVEKVREIVGDELPLMLDL-AVP---EDLDQTKSF---LKEVSSFNP 222 (391)
T ss_dssp HHHHHHHHTTCSCEEECC-----CCSSHHHHHHHHHHHHHHHCSSSCEEEEC-CCC---SCHHHHHHH---HHHHGGGCC
T ss_pred HHHHHHHHcCCCEEEEcc-----CCChHHHHHHHHHHHHHHhCCCCEEEEEc-CCC---CCHHHHHHH---HHHHHhcCC
Confidence 456677788999999863 2332 2456777777764334457888 655 566554433 455667888
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
+-|-= +-..-|.+.+++|.+.. ++|+.
T Consensus 223 ~~iEq----P~~~~d~~~~~~l~~~~-~iPIa 249 (391)
T 2qgy_A 223 YWIEE----PVDGENISLLTEIKNTF-NMKVV 249 (391)
T ss_dssp SEEEC----SSCTTCHHHHHHHHHHC-SSCEE
T ss_pred CeEeC----CCChhhHHHHHHHHhhC-CCCEE
Confidence 75421 11224788888887654 45553
No 405
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=63.91 E-value=23 Score=28.30 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=0.0
Q ss_pred CCCCC--CHHHHHHHHhhC-------CCcEEEEEccCCCCCcccCHHH---------HHHHHHHHHHHHHcCCCEEEEee
Q psy7930 42 GGLTP--TLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFSQAE---------KEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 42 GGlTP--S~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys~~E---------~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
||+.| +..+++.+.+.+ .+|..+.=.| +..+-.+ ...|.+.++.+.+.|+|.+|+-|
T Consensus 33 GGmg~~aT~~~~~~i~~~~~~~~D~~h~p~~~~s~~-----~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~Gad~IVIaC 107 (268)
T 3s81_A 33 GGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIP-----DIPDRTACLLSGGPSPYRYLERYLHMLEDAGAECIVIPC 107 (268)
T ss_dssp CCSSHHHHHHHHHHHHHHSCCSSGGGSCCEEEEECT-----TSCCHHHHHHHCCCCSHHHHHHHHHHHHHTTCSEEECSC
T ss_pred ecCCHHHHHHHHHHHHHhhHhhcCCCCCCEEEeccC-----CHHHHHHHHHhCCchHHHHHHHHHHHHHHcCCCEEEEeC
Q ss_pred ecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 104 LTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 104 L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
-|..- .+.+|-+.. ++|+.
T Consensus 108 NTah~-----~l~~lr~~~-~iPvi 126 (268)
T 3s81_A 108 NTAHY-----WFDDLQNVA-KARMI 126 (268)
T ss_dssp SGGGG-----GHHHHHHHC-SSEEE
T ss_pred CCHHH-----HHHHHHHHC-CCCEE
No 406
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=63.80 E-value=3.5 Score=34.54 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCCEEEecCC--------------------CCCCCCCCC------HHHHHHHHhhC--CCcEEEEEccCC
Q psy7930 19 VASALAAVRGGADRLELCAA--------------------LSEGGLTPT------LGLYRVIKRLV--LVPVFVMIRVRA 70 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~--------------------l~~GGlTPS------~g~i~~~~~~~--~ipv~vMIRP~R 70 (146)
.+-+..|+++||+.|-+... -..||+++. ...++++++.+ ++||...
T Consensus 207 ~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~----- 281 (345)
T 3oix_A 207 VHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGT----- 281 (345)
T ss_dssp HHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEE-----
T ss_pred HHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEE-----
Confidence 45567788889987754321 124676642 57888998888 6887553
Q ss_pred CCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Q psy7930 71 GFDFVFSQAEKEIMALDCHQFVESGADGFVIG 102 (146)
Q Consensus 71 ~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG 102 (146)
|| +.|. +|+..+..+|||+|-+|
T Consensus 282 GG--I~s~-------~da~~~l~aGAd~V~ig 304 (345)
T 3oix_A 282 GG--VXTG-------RDAFEHILCGASMVQIG 304 (345)
T ss_dssp SS--CCSH-------HHHHHHHHHTCSEEEES
T ss_pred CC--CCCh-------HHHHHHHHhCCCEEEEC
Confidence 55 4444 34555556899999998
No 407
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=62.79 E-value=63 Score=26.52 Aligned_cols=93 Identities=8% Similarity=-0.088 Sum_probs=57.7
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+.+..+.+.|.+.+++.- |+-.|. ...++.+++.++-.+.+||.. ++| |+.+|...+ ++.+.++|++-
T Consensus 170 ~~a~~~~~~Gf~~vKik~----g~~~~~~~e~v~avr~a~g~d~~l~vDa-n~~---~~~~~a~~~---~~~l~~~~i~~ 238 (388)
T 2nql_A 170 ELAKYWQDRGFNAFKFAT----PVADDGPAAEIANLRQVLGPQAKIAADM-HWN---QTPERALEL---IAEMQPFDPWF 238 (388)
T ss_dssp HHHHHHHHTTCCEEEEEG----GGCTTCHHHHHHHHHHHHCTTSEEEEEC-CSC---SCHHHHHHH---HHHHGGGCCSC
T ss_pred HHHHHHHHhCCCEEEEeC----CCCChHHHHHHHHHHHHhCCCCEEEEEC-CCC---CCHHHHHHH---HHHHhhcCCCE
Confidence 455667788999999863 432233 677888888774345567888 655 565554433 44566788875
Q ss_pred EEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 99 FVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 99 ~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
|- .+-..-|.+.+++|.+.. ++|+.
T Consensus 239 iE----qP~~~~d~~~~~~l~~~~-~iPI~ 263 (388)
T 2nql_A 239 AE----APVWTEDIAGLEKVSKNT-DVPIA 263 (388)
T ss_dssp EE----CCSCTTCHHHHHHHHTSC-CSCEE
T ss_pred EE----CCCChhhHHHHHHHHhhC-CCCEE
Confidence 42 111234777777776543 45554
No 408
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=62.61 E-value=40 Score=27.72 Aligned_cols=66 Identities=26% Similarity=0.292 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
+-+.+-+++|||=|=+= |+ ++...++++.+.+++|+.+-+-. .+..=.+| .+.+.++|++-+
T Consensus 175 ~Ra~ay~~AGAD~if~~------~~-~~~ee~~~~~~~~~~Pl~~n~~~-~g~tp~~~----------~~eL~~lGv~~v 236 (298)
T 3eoo_A 175 ERAIAYVEAGADMIFPE------AM-KTLDDYRRFKEAVKVPILANLTE-FGSTPLFT----------LDELKGANVDIA 236 (298)
T ss_dssp HHHHHHHHTTCSEEEEC------CC-CSHHHHHHHHHHHCSCBEEECCT-TSSSCCCC----------HHHHHHTTCCEE
T ss_pred HHHHhhHhcCCCEEEeC------CC-CCHHHHHHHHHHcCCCeEEEecc-CCCCCCCC----------HHHHHHcCCeEE
Confidence 55667788999988332 23 58999999999999998554433 22211234 566778899999
Q ss_pred EEee
Q psy7930 100 VIGA 103 (146)
Q Consensus 100 VfG~ 103 (146)
.+|.
T Consensus 237 ~~~~ 240 (298)
T 3eoo_A 237 LYCC 240 (298)
T ss_dssp EECS
T ss_pred EEch
Confidence 8884
No 409
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=62.44 E-value=14 Score=29.38 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=63.1
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCC--C-----HHHHHHHHhhCC---CcEEEEEccCCCCCcccCH
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCAALSEGGLTP--T-----LGLYRVIKRLVL---VPVFVMIRVRAGFDFVFSQ 78 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTP--S-----~g~i~~~~~~~~---ipv~vMIRP~R~gdF~Ys~ 78 (146)
+..|=+-..+++.+..|...|||-+=|+- +.+.+| . +..+.......+ -+..++||+ ++-+--+
T Consensus 9 rs~L~~p~~~~~~~~~a~~~gaD~vilDl---Edav~~~~~~k~~Ar~~v~~~l~~~~~~~~~~~~~VRv-~~~~~~~-- 82 (284)
T 1sgj_A 9 RSVLFAPGNRADLIAKLPRSAPDAVVIDL---EDAVPGTAEAKAAARPVAHDAARDLIAAAPHLAVFVRV-NALHSPY-- 82 (284)
T ss_dssp SEEEEEETTCHHHHHHTTTTCCSEEEEES---STTSCSSHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEC-CCTTSTT--
T ss_pred ceEEEccCCCHHHHHHHHhCCCCEEEEEC---CCCCCCchhhHHHHHHHHHHHHHhcccccCCCeEEEEe-CCCCCHh--
Confidence 45566778999999999999999988884 467777 3 333332222211 245678998 6543111
Q ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 79 AEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 79 ~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
...||+.+.+ |++||++=-.+. .=|.....++++.+
T Consensus 83 -----~~~dl~~~l~-g~~~i~lPkv~s--~~~v~~~~~~l~~~ 118 (284)
T 1sgj_A 83 -----FEDDLSVLTP-ELSGVVVPKLEM--GAEARQVAQMLQER 118 (284)
T ss_dssp -----HHHHGGGCCT-TSSEEEECSCCS--HHHHHHHHHHHHHT
T ss_pred -----HHHHHHHHhc-cCCEEEeCCCCC--HHHHHHHHHHHHhc
Confidence 4567777777 999998865432 23444555555544
No 410
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=62.36 E-value=18 Score=33.18 Aligned_cols=55 Identities=11% Similarity=0.218 Sum_probs=45.3
Q ss_pred CHHHHHHHHhhC---CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee
Q psy7930 47 TLGLYRVIKRLV---LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 47 S~g~i~~~~~~~---~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
+..-++++.++. +|-|..-|-| +.++.|+++++..+..-+..+.++|++.|-+++
T Consensus 184 t~~ei~elv~yA~~rgI~vvpeI~P--g~~~~~~~~~~~~l~~k~~~l~~lG~r~~~i~~ 241 (716)
T 2cho_A 184 EAAQLQELVAVANENEVDFVWAIHP--GQDIKWNKEDRDLLLAKFEKMYQLGVRSFAVFF 241 (716)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECC--TTTCCSSHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred hHHHHHHHHHHHHHcCCEEEEeecc--cccCCCCHHHHHHHHHHHHHHHhcCCCeeEEec
Confidence 445566666543 8999999999 899999999999999988888999999887774
No 411
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=62.33 E-value=4.9 Score=31.88 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=56.1
Q ss_pred ceeEEEecCHHHHHHHHHcCCCEEEe-cCCCCCCCCCCCHH---HHHHHHhhC-----CCcEEEEEccCCCCCcccCHHH
Q psy7930 10 TTLEVCVDSVASALAAVRGGADRLEL-CAALSEGGLTPTLG---LYRVIKRLV-----LVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 10 ~~lEvcv~s~~~a~~A~~~GAdRIEL-c~~l~~GGlTPS~g---~i~~~~~~~-----~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
+-+.++-.++.+.......++|.|=+ +-+...||-+.... -++++++.. ++||.| -|| -+
T Consensus 129 ~gv~l~p~Tp~~~l~~~l~~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v-----dGG---I~--- 197 (237)
T 3cu2_A 129 IGACLCPETPISELEPYLDQIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI-----DGS---MT--- 197 (237)
T ss_dssp EEEEECTTSCGGGGTTTTTTCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE-----ESS---CC---
T ss_pred EEEEEeCCChHHHHHHHhhcCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE-----ECC---cC---
Confidence 34444446777777777778998766 33566677766533 344444443 355543 244 11
Q ss_pred HHHHHHHHHHHHH--cCCCEEEEe-eecCCCCcCH-HHHHHHHH
Q psy7930 81 KEIMALDCHQFVE--SGADGFVIG-ALTGEQEIDI-EFIRQLKT 120 (146)
Q Consensus 81 ~~~M~~dI~~~~~--~GadG~VfG-~L~~dg~iD~-~~~~~Li~ 120 (146)
.+.+..+++ +|||+||.| ++.. . |. ++.++|.+
T Consensus 198 ----~~~~~~~~~~~aGad~~VvGSaIf~--~-d~~~~~~~l~~ 234 (237)
T 3cu2_A 198 ----LELAKYFKQGTHQIDWLVSGSALFS--G-ELKTNLKVWKS 234 (237)
T ss_dssp ----HHHHHHHHHSSSCCCCEEECGGGGS--S-CHHHHHHHHHH
T ss_pred ----HHHHHHHHHhCCCCcEEEEeeHHhC--C-CHHHHHHHHHH
Confidence 256788899 999999999 3332 2 54 45555543
No 412
>2rjg_A Alanine racemase; alpha/beta barrel, cell shape, cell WALL biogenesis/degradat isomerase, peptidoglycan synthesis, pyridoxal phosphate; HET: KCX PLP; 2.40A {Escherichia coli} PDB: 2rjh_A* 3b8v_A* 3b8u_A* 3b8t_A* 3b8w_A*
Probab=62.20 E-value=14 Score=30.51 Aligned_cols=115 Identities=11% Similarity=0.080 Sum_probs=64.5
Q ss_pred eeEEEecCHHHHHHHHHcCCC-EEEec-CCCC--------CCCCCC---CHHHHHHHHh-h--CCCcEEEEEccCCCCCc
Q psy7930 11 TLEVCVDSVASALAAVRGGAD-RLELC-AALS--------EGGLTP---TLGLYRVIKR-L--VLVPVFVMIRVRAGFDF 74 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAd-RIELc-~~l~--------~GGlTP---S~g~i~~~~~-~--~~ipv~vMIRP~R~gdF 74 (146)
.--+++.+++++....+.|.+ +|-+. ..+. .-++++ |...++.+.+ . ..++|++.|-. -.+-|
T Consensus 72 ~~~~~va~~~Ea~~lr~~G~~~~Il~~~g~~~~~~~~~~~~~~i~~~vds~~~l~~l~~a~~~~~~~V~l~vdt-Gm~R~ 150 (379)
T 2rjg_A 72 ADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDT-GMHRL 150 (379)
T ss_dssp CSEEEESSHHHHHHHHHTTCCSCEEETTCCSCGGGHHHHHHTTEEEEECSHHHHHHHHHCCCSSCBCEEEEBCS-SCCSS
T ss_pred CCEEEEeEHHHHHHHHhCCcCCCEEEEECCCCHHHHHHHHHcCcEEEECCHHHHHHHHhhCCCCCeEEEEEECC-CCCcc
Confidence 456889999999999999987 67632 2110 013333 2334444433 1 23567777776 33345
Q ss_pred ccCHHHHHHHHHHHHHHHH-cCCCEEE--EeeecCCC-CcCHHHHHHHHHHhCCCC
Q psy7930 75 VFSQAEKEIMALDCHQFVE-SGADGFV--IGALTGEQ-EIDIEFIRQLKTIIGDRP 126 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~-~GadG~V--fG~L~~dg-~iD~~~~~~Li~~a~~~~ 126 (146)
=++.+|+..+.+.+..+.. +-..|+- ||+-+... .....+.+.+.+.+..++
T Consensus 151 G~~~~e~~~~~~~i~~~~~~l~l~Gl~tH~~~~d~~~~~~~~~q~~~f~~~~~~l~ 206 (379)
T 2rjg_A 151 GVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKP 206 (379)
T ss_dssp SBCHHHHHHHHHHHTTCSSBCSSCEEECCCSSTTCTTSTHHHHHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHhCCCcEEEEEEEEECCccCCCCcHHHHHHHHHHHHHHhccC
Confidence 4577887777666655444 5566763 34322211 222356666767666544
No 413
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=62.12 E-value=59 Score=26.99 Aligned_cols=107 Identities=7% Similarity=-0.025 Sum_probs=56.2
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCc--------cc-CHHHHHH-HHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDF--------VF-SQAEKEI-MALD 87 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF--------~Y-s~~E~~~-M~~d 87 (146)
..+++..+.++|..+|=-|.. ..|++-+...+.++.+..++.|++.. |-| .. +-+++.. |.++
T Consensus 77 ~~~el~~~~~aGv~tiV~~~g--~~g~~r~~~~l~~la~~~gi~i~~~t-----G~y~~~~~P~~~~~~~~~L~~~~~~e 149 (365)
T 3rhg_A 77 VIFELNNFKELGGKTIVDATG--SSSIGRDIRKLKQVAELTGINVVASS-----GLYIEKFEGKRLADDIDAMAKMIDDE 149 (365)
T ss_dssp HHHHHHHHHHTTEEEEEECCC--SGGGTCCHHHHHHHHHHHCCEEECEE-----CCCCHHHHGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEcCC--CCCCCCCHHHHHHHHHHHCCcEEEEe-----CccCCCCCchhhcCCHHHHHHHHHHH
Confidence 346677888999988766641 23556788888877776665554332 222 11 2344432 2222
Q ss_pred HHH-HHHcCCCEEEEeeecCCCCcCHH---HHHHHHHHhC---CCCeEEee
Q psy7930 88 CHQ-FVESGADGFVIGALTGEQEIDIE---FIRQLKTIIG---DRPITFHR 131 (146)
Q Consensus 88 I~~-~~~~GadG~VfG~L~~dg~iD~~---~~~~Li~~a~---~~~vtFHR 131 (146)
|.. +...++...++|-.--|..+... .++.-+++|+ ++|+++|.
T Consensus 150 i~~gi~~t~vkag~IGEiGld~~~t~~q~~~f~aq~~~A~~~~glPV~iH~ 200 (365)
T 3rhg_A 150 LNIGIDGTDIRAGMIGEIGVSPFFTDGEKNSLRAAALAQNNNPYASMNIHM 200 (365)
T ss_dssp HHTCSTTSSCCCCEEEEEECCTTCCHHHHHHHHHHHHHHTTCTTCEEEEEC
T ss_pred HHhccccCCceeEEEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCcEEEEC
Confidence 221 11122333445544334444443 3444445554 88999993
No 414
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=62.02 E-value=31 Score=27.90 Aligned_cols=82 Identities=5% Similarity=-0.128 Sum_probs=52.3
Q ss_pred HHHHHHHHc-CCCEEEecC-CCCCCCCCC--CHHHHHHHHhhCCCcEEEEEccCCCCCccc----CHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRG-GADRLELCA-ALSEGGLTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVF----SQAEKEIMALDCHQF 91 (146)
Q Consensus 20 ~~a~~A~~~-GAdRIELc~-~l~~GGlTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Y----s~~E~~~M~~dI~~~ 91 (146)
+....+.+. |.+-||+.- .+..|+.-| ...-+++..+..++.+.++--..-..++.+ -+..++.+++-|+.+
T Consensus 25 ~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a 104 (367)
T 1tz9_A 25 IPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNL 104 (367)
T ss_dssp SCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 446777888 999999863 344555443 344455555566787775321100101111 145688899999999
Q ss_pred HHcCCCEEEE
Q psy7930 92 VESGADGFVI 101 (146)
Q Consensus 92 ~~~GadG~Vf 101 (146)
+++|++-+++
T Consensus 105 ~~lG~~~v~~ 114 (367)
T 1tz9_A 105 GKCGISLVCY 114 (367)
T ss_dssp HHTTCCEEEE
T ss_pred HHcCCCEEEE
Confidence 9999999988
No 415
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=62.00 E-value=64 Score=26.37 Aligned_cols=91 Identities=12% Similarity=0.120 Sum_probs=58.6
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCC--CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTP--TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTP--S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+.+..+.+.|.+.|++.- || .| ....++.+++.++ .+.++|-. ++| |+.+|...+ ++.+.+.|++
T Consensus 153 ~~a~~~~~~Gf~~iKik~----g~-~~~~~~e~v~avr~a~g-d~~l~vD~-n~~---~~~~~a~~~---~~~l~~~~i~ 219 (384)
T 2pgw_A 153 RDAAVGHAQGERVFYLKV----GR-GEKLDLEITAAVRGEIG-DARLRLDA-NEG---WSVHDAINM---CRKLEKYDIE 219 (384)
T ss_dssp HHHHHHHHTTCCEEEEEC----CS-CHHHHHHHHHHHHTTST-TCEEEEEC-TTC---CCHHHHHHH---HHHHGGGCCS
T ss_pred HHHHHHHHcCCCEEEECc----CC-CHHHHHHHHHHHHHHcC-CcEEEEec-CCC---CCHHHHHHH---HHHHHhcCCC
Confidence 456677788999999863 44 33 2456777777775 45567777 554 566554333 4566778888
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
-|- .+-..-|.+.+++|.+.. ++|+.
T Consensus 220 ~iE----qP~~~~~~~~~~~l~~~~-~iPI~ 245 (384)
T 2pgw_A 220 FIE----QPTVSWSIPAMAHVREKV-GIPIV 245 (384)
T ss_dssp EEE----CCSCTTCHHHHHHHHHHC-SSCEE
T ss_pred EEe----CCCChhhHHHHHHHHhhC-CCCEE
Confidence 553 222345788888887755 46654
No 416
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=61.19 E-value=7 Score=31.34 Aligned_cols=43 Identities=12% Similarity=0.175 Sum_probs=27.8
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC-CCcEEEEEcc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV-LVPVFVMIRV 68 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~-~ipv~vMIRP 68 (146)
+.+...++.|+|-|=++.| |.|.-.+..+++.+ ++||.=|+.|
T Consensus 60 ~~~~~L~~~g~~~iVIACN------Ta~~~al~~lr~~~~~iPvigiiep 103 (268)
T 3out_A 60 QTAKFLIDQEVKAIIIACN------TISAIAKDIVQEIAKAIPVIDVITA 103 (268)
T ss_dssp HHHHHHHHTTCSEEEECCH------HHHHHHHHHHHHHHTTSCEEEHHHH
T ss_pred HHHHHHHHCCCCEEEEeCC------ChHHHHHHHHHHhcCCCCEEeccHH
Confidence 4444556678888877765 55555566666766 7777665544
No 417
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=61.07 E-value=34 Score=27.67 Aligned_cols=93 Identities=18% Similarity=0.102 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCH----HHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTL----GLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~----g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
++-+..|++.|||-+=+..-+.-....||. ..++.+.+.+++||.+-=-| . .++.++.+-+..+.+++
T Consensus 93 i~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P-~-tg~~l~~~~~~~La~~~------ 164 (309)
T 3fkr_A 93 AARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAP-A-SGTALSAPFLARMAREI------ 164 (309)
T ss_dssp HHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECG-G-GCCCCCHHHHHHHHHHS------
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCC-C-CCCCCCHHHHHHHHhhC------
Confidence 345677999999999988754321235553 34455566779999888789 6 56888877666554321
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
.. |+|+ +.+-.=|...+.++++..+
T Consensus 165 --pn-Ivgi-K~~~~~~~~~~~~~~~~~~ 189 (309)
T 3fkr_A 165 --EQ-VAYF-XIETPGAANKLRELIRLGG 189 (309)
T ss_dssp --TT-EEEE-EECSSSHHHHHHHHHHHHG
T ss_pred --CC-EEEE-ECCCcchHHHHHHHHHhcC
Confidence 22 3453 3222225566777776654
No 418
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=61.02 E-value=72 Score=26.59 Aligned_cols=104 Identities=15% Similarity=0.093 Sum_probs=0.0
Q ss_pred CHHHHHHHHHcCCCEEEecCCCCC-----CCCCC------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAALSE-----GGLTP------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMAL 86 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l~~-----GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~ 86 (146)
+..++..|.++|++.|.+....+. =|.|+ ....++.+++.-.. +.|.+-+ .-.|.++.+.+..+.+
T Consensus 76 ~~~di~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~-~~v~~~~--ed~~~~~~~~~~~~~~ 152 (382)
T 2ztj_A 76 RLDAAKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPH-VEVRFSA--EDTFRSEEQDLLAVYE 152 (382)
T ss_dssp CHHHHHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTT-SEEEEEE--TTTTTSCHHHHHHHHH
T ss_pred ChhhHHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCC-EEEEEEE--EeCCCCCHHHHHHHHH
Q ss_pred HHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHh-----CCCCeEEe
Q psy7930 87 DCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTII-----GDRPITFH 130 (146)
Q Consensus 87 dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a-----~~~~vtFH 130 (146)
.+..+ ++.|.+. +--|-.......++++.. .+.++-||
T Consensus 153 ~~~~~----a~~i~l~--DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H 195 (382)
T 2ztj_A 153 AVAPY----VDRVGLA--DTVGVATPRQVYALVREVRRVVGPRVDIEFH 195 (382)
T ss_dssp HHGGG----CSEEEEE--ETTSCCCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHh----cCEEEec--CCCCCCCHHHHHHHHHHHHHhcCCCCeEEEE
No 419
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=60.76 E-value=32 Score=28.44 Aligned_cols=65 Identities=17% Similarity=0.084 Sum_probs=42.1
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCC-CcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCE
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVL-VPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADG 98 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~-ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG 98 (146)
+-+.+-+++|||=|=+= |+ +|...++++.+.++ +|+.+-+-| .++.-.+|.+|+ +++|++-
T Consensus 182 ~Ra~ay~eAGAD~ifi~------~~-~~~~~~~~i~~~~~~~Pv~~n~~~-~g~~p~~t~~eL----------~~lGv~~ 243 (307)
T 3lye_A 182 ERLRAARDEGADVGLLE------GF-RSKEQAAAAVAALAPWPLLLNSVE-NGHSPLITVEEA----------KAMGFRI 243 (307)
T ss_dssp HHHHHHHHTTCSEEEEC------CC-SCHHHHHHHHHHHTTSCBEEEEET-TSSSCCCCHHHH----------HHHTCSE
T ss_pred HHHHHHHHCCCCEEEec------CC-CCHHHHHHHHHHccCCceeEEeec-CCCCCCCCHHHH----------HHcCCeE
Confidence 44556788999988332 33 68889999998875 898765556 333224455544 4567765
Q ss_pred EEEe
Q psy7930 99 FVIG 102 (146)
Q Consensus 99 ~VfG 102 (146)
+.+|
T Consensus 244 v~~~ 247 (307)
T 3lye_A 244 MIFS 247 (307)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 5555
No 420
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=60.52 E-value=51 Score=27.24 Aligned_cols=70 Identities=11% Similarity=0.195 Sum_probs=48.6
Q ss_pred HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcC--HHHHHHHHHHhC--
Q psy7930 48 LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEID--IEFIRQLKTIIG-- 123 (146)
Q Consensus 48 ~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD--~~~~~~Li~~a~-- 123 (146)
-.+.+..++.-+.++ ++|=| +-.+.++.. +.++.+.+.|.|.|.+| +.+ +. .+.+.++++..+
T Consensus 28 ~~~~~~l~~~~~~~~-~liDP-----dK~~~~~~~---~~~~~~~~sGtDai~VG--S~~--vt~~~~~~~~~v~~ik~~ 94 (286)
T 3vk5_A 28 GRVLARLREHQPGPV-HIIDP-----FKVPVTEAV---EKAAELTRLGFAAVLLA--STD--YESFESHMEPYVAAVKAA 94 (286)
T ss_dssp CHHHHHHHHSCCEEE-EEECT-----TTSCHHHHH---HHHHHHHHTTCSCEEEE--CSC--CSSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhccCCce-EEECC-----CCCCcHHHH---HHHHHHHhcCCCEEEEc--cCC--CCcchHHHHHHHHHHHHh
Confidence 457777777744455 58999 334555544 34566678999999999 432 67 777777777775
Q ss_pred -CCCeEEe
Q psy7930 124 -DRPITFH 130 (146)
Q Consensus 124 -~~~vtFH 130 (146)
++|+..|
T Consensus 95 ~~lPvil~ 102 (286)
T 3vk5_A 95 TPLPVVLH 102 (286)
T ss_dssp CSSCEEEE
T ss_pred CCCCEEEE
Confidence 6888874
No 421
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=60.51 E-value=66 Score=26.18 Aligned_cols=86 Identities=14% Similarity=0.149 Sum_probs=55.6
Q ss_pred ccceeEEEecCHHHHHHHHHcCCCEEEecC-CC------CCCCCCCCHHHHHH---HHhhCCCcEEEEEccCCCCCcccC
Q psy7930 8 NKTTLEVCVDSVASALAAVRGGADRLELCA-AL------SEGGLTPTLGLYRV---IKRLVLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 8 ~~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l------~~GGlTPS~g~i~~---~~~~~~ipv~vMIRP~R~gdF~Ys 77 (146)
+.++.=.++.|.-+|+.+++.|.+=|=+=+ ++ .-+|+.+--..+.. +.+.+++|| +.=- -.| |- +
T Consensus 14 ~~~i~~~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~Pv--iaD~-d~G-yg-~ 88 (290)
T 2hjp_A 14 GRLFTAMAAHNPLVAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPL--IADI-DTG-FG-N 88 (290)
T ss_dssp CCCEEEEECSSHHHHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCE--EEEC-TTT-TS-S
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCE--EEEC-CCC-CC-C
Confidence 346667899999999999999999996654 12 23344444444444 445568884 4432 134 43 3
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEE
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~Vf 101 (146)
. +...+-++.+.+.|+.||-+
T Consensus 89 ~---~~~~~~v~~l~~aGa~gv~i 109 (290)
T 2hjp_A 89 A---VNVHYVVPQYEAAGASAIVM 109 (290)
T ss_dssp H---HHHHHHHHHHHHHTCSEEEE
T ss_pred H---HHHHHHHHHHHHhCCeEEEE
Confidence 3 33446677777899999876
No 422
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=60.48 E-value=8.6 Score=30.06 Aligned_cols=61 Identities=18% Similarity=0.068 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEE--EccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVM--IRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vM--IRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
..-+..|.+.|.+-+ .| |++-| ..++.+++..+--+.+- ||| -|| +...+.+.|+
T Consensus 125 ~~~a~~a~~~g~~Gv-V~-----sat~p--~e~~~ir~~~~~~~~vtPGI~~-~g~--------------tp~~a~~~Ga 181 (222)
T 4dbe_A 125 DYIKNVIREISPKGI-VV-----GGTKL--DHITQYRRDFEKMTIVSPGMGS-QGG--------------SYGDAVCAGA 181 (222)
T ss_dssp HHHHHHHHHHCCSEE-EE-----CTTCH--HHHHHHHHHCTTCEEEECCBST-TSB--------------CTTHHHHHTC
T ss_pred HHHHHHHHHhCCCEE-EE-----CCCCH--HHHHHHHHhCCCCEEEcCCccc-Ccc--------------CHHHHHHcCC
Confidence 345566777786644 22 33333 55666777664322222 688 555 3667778999
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|-+|+|
T Consensus 182 d~iVVG 187 (222)
T 4dbe_A 182 DYEIIG 187 (222)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999998
No 423
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=60.45 E-value=15 Score=28.30 Aligned_cols=38 Identities=34% Similarity=0.329 Sum_probs=27.3
Q ss_pred HHHHHHHHcCCC--EEEEeeecCCCCcCHHHHHHHHHHhCC
Q psy7930 86 LDCHQFVESGAD--GFVIGALTGEQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 86 ~dI~~~~~~Gad--G~VfG~L~~dg~iD~~~~~~Li~~a~~ 124 (146)
+|++.+.++||| ||||- =..-..|+.+..++|.+...+
T Consensus 13 eda~~a~~~GaD~iGfif~-~~SpR~V~~~~a~~i~~~~~~ 52 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFY-PKSKRYISPEDARRISVELPP 52 (205)
T ss_dssp HHHHHHHHHTCSEEEEECC-TTCTTBCCHHHHHHHHHHSCS
T ss_pred HHHHHHHHcCCCEEEEEec-CCCCCcCCHHHHHHHHHhCCC
Confidence 678888888888 77762 234456888888888877653
No 424
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=59.61 E-value=91 Score=27.32 Aligned_cols=113 Identities=13% Similarity=0.120 Sum_probs=70.3
Q ss_pred eeEEEecCHHHHHHHH----HcCCC-EEEecCC-CC-CCCCCCC-----HHHHHHHHhhCCCcE--EEEEccCCCCCccc
Q psy7930 11 TLEVCVDSVASALAAV----RGGAD-RLELCAA-LS-EGGLTPT-----LGLYRVIKRLVLVPV--FVMIRVRAGFDFVF 76 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~----~~GAd-RIELc~~-l~-~GGlTPS-----~g~i~~~~~~~~ipv--~vMIRP~R~gdF~Y 76 (146)
+.=||+.|++-+.++. +.++- =||.-.+ .. .||.|.- ..+++.+.+..++|+ .++=.= ++|+|.+
T Consensus 23 i~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlD-Hg~~~~w 101 (450)
T 3txv_A 23 IPSICSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGD-HLGPNPW 101 (450)
T ss_dssp EEEECCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEE-EESSGGG
T ss_pred EEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECC-CCCCccc
Confidence 4568888887766644 44554 3444432 22 2777642 345565666779997 455555 7888755
Q ss_pred C----HHHHHHHHHHHHHHHHcCCCEEEEeeecCCC----Cc----CHHHHHHHHHHhCC
Q psy7930 77 S----QAEKEIMALDCHQFVESGADGFVIGALTGEQ----EI----DIEFIRQLKTIIGD 124 (146)
Q Consensus 77 s----~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg----~i----D~~~~~~Li~~a~~ 124 (146)
. +++++.-.+.|..+.++|-..|-|=+=.... .+ -.+++++|++.|+.
T Consensus 102 ~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~eeNi~lt~evva~rtaeL~~~A~~ 161 (450)
T 3txv_A 102 KHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGEPTALPDATTAARAARLAAVAED 161 (450)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSSCSBCCHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhhccchhHHHHHHHHHHHHHHHHH
Confidence 3 5555666677778888999998875433221 12 23577888888874
No 425
>3t12_B Gliding protein MGLB; G-domain containing protein, bacterial polarity, motility, homodimeric GAP protein, POLE localisation; HET: GDP; 2.20A {Thermus thermophilus} PDB: 3t1q_B*
Probab=59.54 E-value=25 Score=25.73 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=40.5
Q ss_pred CCcccCHHHHHHHHHHHHHHHH-cCCC--------EEEEeeecC---CCCcCHHHHHHHHHHh-------------CCCC
Q psy7930 72 FDFVFSQAEKEIMALDCHQFVE-SGAD--------GFVIGALTG---EQEIDIEFIRQLKTII-------------GDRP 126 (146)
Q Consensus 72 gdF~Ys~~E~~~M~~dI~~~~~-~Gad--------G~VfG~L~~---dg~iD~~~~~~Li~~a-------------~~~~ 126 (146)
|+.+.++++++.+++=+..+.. .|++ |+|+-.--. -..+|.+.+..|...+ +.++
T Consensus 1 ~~lv~~~e~~~~i~~iL~~L~~~~gv~~~~lvd~dG~vIa~~~~~~~~~~~d~~~lAAl~A~~~~a~~~la~~Lge~~~~ 80 (136)
T 3t12_B 1 GSLVLYGAPYAAAVEVLEETLRETGARYALLIDRKGFVLAHKEALWAPKPPPLDTLATLVASNAAATQALAKLLGEARFQ 80 (136)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHCCSEEEEEETTC-CCEEEECTTSCCCSCHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred CceeecHHHHHHHHHHHHHHHhhcCCeEEEEEcCCCCEEEEeccccCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCchh
Confidence 5678899999998888877654 5775 555544332 3478998888887665 2566
Q ss_pred eEEeec
Q psy7930 127 ITFHRA 132 (146)
Q Consensus 127 vtFHRA 132 (146)
-.||..
T Consensus 81 ~l~~eG 86 (136)
T 3t12_B 81 EEVHQG 86 (136)
T ss_dssp CEEEEC
T ss_pred HheEEc
Confidence 777753
No 426
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=59.46 E-value=7.9 Score=32.27 Aligned_cols=52 Identities=27% Similarity=0.333 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHH-cCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeecc
Q psy7930 82 EIMALDCHQFVE-SGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAF 133 (146)
Q Consensus 82 ~~M~~dI~~~~~-~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAF 133 (146)
+...++|+.+.+ +|+.||-+........+|-+.+..+.++|. +++|.+|-..
T Consensus 159 ~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l~d~~~~pi~~~~~e~g~pV~iH~g~ 213 (373)
T 4inf_A 159 EWSAREIHRGARELGFKGIQINSHTQGRYLDEEFFDPIFRALVEVDQPLYIHPAT 213 (373)
T ss_dssp HHHHHHHHHHHHTSCCCCEEECSCBTTBCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEECCCCCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 344567777776 599999876544444688888999998886 8999999754
No 427
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=59.36 E-value=19 Score=30.13 Aligned_cols=60 Identities=20% Similarity=0.185 Sum_probs=39.9
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGFV 100 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~V 100 (146)
+...++.|+|-|++-..- .| | .+++.+++.+++||.+. |++ |.++. +.+.+.| +|+|.
T Consensus 256 a~~l~~~Gvd~i~v~~~~-~~---~--~~~~~ik~~~~iPvi~~------Ggi--t~e~a-------~~~l~~G~aD~V~ 314 (361)
T 3gka_A 256 ARELGRRRIAFLFARESF-GG---D--AIGQQLKAAFGGPFIVN------ENF--TLDSA-------QAALDAGQADAVA 314 (361)
T ss_dssp HHHHHHTTCSEEEEECCC-ST---T--CCHHHHHHHHCSCEEEE------SSC--CHHHH-------HHHHHTTSCSEEE
T ss_pred HHHHHHcCCCEEEECCCC-CC---H--HHHHHHHHHcCCCEEEe------CCC--CHHHH-------HHHHHcCCccEEE
Confidence 556678899999987532 11 2 45777888888996432 334 65443 4444556 99999
Q ss_pred Ee
Q psy7930 101 IG 102 (146)
Q Consensus 101 fG 102 (146)
||
T Consensus 315 iG 316 (361)
T 3gka_A 315 WG 316 (361)
T ss_dssp ES
T ss_pred EC
Confidence 98
No 428
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=59.25 E-value=6.8 Score=30.72 Aligned_cols=64 Identities=9% Similarity=0.103 Sum_probs=40.8
Q ss_pred CcEEEEEccCCCCCcccCHHHHHHH----HHHHHHHHHcCCCEEEEeeecCCCCc----CHHHHHHHHHHhCCCCeE
Q psy7930 60 VPVFVMIRVRAGFDFVFSQAEKEIM----ALDCHQFVESGADGFVIGALTGEQEI----DIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 60 ipv~vMIRP~R~gdF~Ys~~E~~~M----~~dI~~~~~~GadG~VfG~L~~dg~i----D~~~~~~Li~~a~~~~vt 128 (146)
+.+| =|= +..+ .-|++++.+| .+..+.+...|+|.++++|-+...-. |....++|-+ +-+.|++
T Consensus 31 v~~h--~R~-~~~~-~~t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~-~~~iPv~ 102 (240)
T 3ixl_A 31 LPFI--ASG-LGLG-SVTPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMRE-ATGLPCT 102 (240)
T ss_dssp SCEE--EEE-CCCC-CSSHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHH-HHSSCEE
T ss_pred ceeE--eec-ccCC-CCCHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHh-ccCCCEE
Confidence 5566 553 2312 3578999999 44567788889999999997754322 2344455544 4567765
No 429
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=59.09 E-value=73 Score=26.04 Aligned_cols=109 Identities=14% Similarity=0.025 Sum_probs=65.0
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecC-CC-------CCCCCCCCHHHH----HHHHhhCCCcEEEEEccCCCCCccc
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCA-AL-------SEGGLTPTLGLY----RVIKRLVLVPVFVMIRVRAGFDFVF 76 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l-------~~GGlTPS~g~i----~~~~~~~~ipv~vMIRP~R~gdF~Y 76 (146)
..+.=.++.++.+|+.+.++|.|=| |.. ++ .-++. -+...+ +.+.+.++.|..+.==| .|+|.-
T Consensus 17 ~~i~~~tayDa~sA~l~e~aG~d~i-lvGdSl~~~~lG~~dt~~-vTldemi~h~~aV~r~~~~~~vvaD~p--fgsy~~ 92 (275)
T 1o66_A 17 EKIAMLTAYESSFAALMDDAGVEML-LVGDSLGMAVQGRKSTLP-VSLRDMCYHTECVARGAKNAMIVSDLP--FGAYQQ 92 (275)
T ss_dssp CCEEEEECCSHHHHHHHHHTTCCEE-EECTTHHHHTTCCSSSTT-CCHHHHHHHHHHHHHHCSSSEEEEECC--TTSSSS
T ss_pred CcEEEEeCcCHHHHHHHHHcCCCEE-EECHHHHHHHcCCCCCCC-CCHHHHHHHHHHHHhhCCCCeEEEECC--CCCccC
Confidence 4677789999999999999999988 774 22 11222 233333 33445566666553346 555655
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEe
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFH 130 (146)
|.++ ..+.+..+.+.||+||=+ +||.-=.++++.+++ .+.||.=|
T Consensus 93 s~~~---a~~na~rl~kaGa~aVkl----Edg~e~~~~I~al~~--agIpV~gH 137 (275)
T 1o66_A 93 SKEQ---AFAAAAELMAAGAHMVKL----EGGVWMAETTEFLQM--RGIPVCAH 137 (275)
T ss_dssp CHHH---HHHHHHHHHHTTCSEEEE----ECSGGGHHHHHHHHH--TTCCEEEE
T ss_pred CHHH---HHHHHHHHHHcCCcEEEE----CCcHHHHHHHHHHHH--cCCCeEee
Confidence 5533 234444555599998754 345433555666654 35566544
No 430
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=58.99 E-value=24 Score=28.52 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=48.0
Q ss_pred HHcCCCEEEecCCCCCCCCCC---CHHHHHHHHhhC-CCcEEEEE-------ccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 26 VRGGADRLELCAALSEGGLTP---TLGLYRVIKRLV-LVPVFVMI-------RVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 26 ~~~GAdRIELc~~l~~GGlTP---S~g~i~~~~~~~-~ipv~vMI-------RP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
...|.+.+-||-.=..-+.++ ....+...++.. ++|| |+ +| ||.--++..+-+....=...+..+
T Consensus 153 ~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk~~~~~~pV--~~D~sH~~q~~--~~~~~~s~g~~~~~~~~a~aava~ 228 (280)
T 2qkf_A 153 HEAGNGKLILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPV--IFDVTHSLQTR--DAGSAASGGRRAQALDLALAGMAT 228 (280)
T ss_dssp HHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTTCCE--EEEHHHHCC------------CHHHHHHHHHHHHHTT
T ss_pred HHcCCCeEEEEECCCCCCCCccccCHHHHHHHHHhCCCCCE--EEECCCCcccc--CccccccCCchhhHHHHHHHHHHc
Confidence 346988999985311112222 344677777776 7884 66 45 444444444333333334566689
Q ss_pred CCCEEEEeee-cC-----C--CCcCHHHHHHHHHHhC
Q psy7930 95 GADGFVIGAL-TG-----E--QEIDIEFIRQLKTIIG 123 (146)
Q Consensus 95 GadG~VfG~L-~~-----d--g~iD~~~~~~Li~~a~ 123 (146)
||+|+++=.= ++ | .+++.+.+++|++..+
T Consensus 229 Ga~G~~IE~H~~~d~al~D~~~sl~p~~l~~lv~~i~ 265 (280)
T 2qkf_A 229 RLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIK 265 (280)
T ss_dssp CCSEEEEEC----------------CCHHHHHHHHHH
T ss_pred CCCEEEEeecCCcccCCCccccCCCHHHHHHHHHHHH
Confidence 9999998642 21 3 3578888888887654
No 431
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=58.92 E-value=19 Score=28.56 Aligned_cols=23 Identities=17% Similarity=0.418 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEee
Q psy7930 81 KEIMALDCHQFVESGADGFVIGA 103 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~ 103 (146)
.+.+++-++.+++.|+|.+|+||
T Consensus 163 ~~~l~~~l~~l~~~~~D~iVLGC 185 (272)
T 1zuw_A 163 DEIVKTSLYPLKDTSIDSLILGC 185 (272)
T ss_dssp HHHHHHHHHHHHHSCCSEEEEES
T ss_pred HHHHHHHHHHHHhcCCCEEEECc
Confidence 34455556677778999999997
No 432
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=58.81 E-value=17 Score=28.04 Aligned_cols=38 Identities=26% Similarity=0.285 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCC--EEEEeeecCCCCcCHHHHHHHHHHhCC
Q psy7930 86 LDCHQFVESGAD--GFVIGALTGEQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 86 ~dI~~~~~~Gad--G~VfG~L~~dg~iD~~~~~~Li~~a~~ 124 (146)
+|++.+.++||| ||||= =..-..|+.+..++|.+...+
T Consensus 12 eda~~a~~~GaD~iGfif~-~~SpR~V~~~~a~~i~~~~~~ 51 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVLA-PGSRRRIAPEAARAIGEALGP 51 (203)
T ss_dssp HHHHHHHHHTCSEEEEECC-TTCTTBCCHHHHHHHHHHSCS
T ss_pred HHHHHHHHcCCCEEEEEec-CCCCCcCCHHHHHHHHHhCCC
Confidence 678888888888 77752 234456888888888777653
No 433
>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=58.79 E-value=14 Score=29.92 Aligned_cols=120 Identities=8% Similarity=-0.047 Sum_probs=61.8
Q ss_pred eeEEEecCHHHHHHHHHcCCC-EEE-ecCCCC--------CCCCCC---CHHHHHHHHh-hCC--CcEEEEEccCCCCCc
Q psy7930 11 TLEVCVDSVASALAAVRGGAD-RLE-LCAALS--------EGGLTP---TLGLYRVIKR-LVL--VPVFVMIRVRAGFDF 74 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAd-RIE-Lc~~l~--------~GGlTP---S~g~i~~~~~-~~~--ipv~vMIRP~R~gdF 74 (146)
.--+++.+++++..+.++|.+ +|- +...+. .-++++ |...++.+.+ ..+ ++|++.|-. -.+-|
T Consensus 52 ~~~~~va~~~Ea~~~~~~G~~~~Il~~~g~~~~~~~~~~~~~~i~~~vds~~~l~~l~~a~~~~~~~V~l~vdt-G~~R~ 130 (357)
T 1rcq_A 52 ADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLKMDS-GMHRV 130 (357)
T ss_dssp CSEEEESSHHHHHHHHHTTCCSCEEETTCCSSGGGHHHHHHTTEEEEECSHHHHHHHHHCCCSSCEEEEEEBCS-SSCSS
T ss_pred CCEEEEccHHHHHHHHhCCcCCCEEEEeCCCCHHHHHHHHHcCCEEEECCHHHHHHHHhhccCCCeEEEEEEcC-CCCCC
Confidence 456899999999999999987 676 322111 013444 2344444433 123 455655555 22345
Q ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEE--EeeecCCC-CcCHHHHHHHHHHhCCCCeEEee
Q psy7930 75 VFSQAEKEIMALDCHQFVESGADGFV--IGALTGEQ-EIDIEFIRQLKTIIGDRPITFHR 131 (146)
Q Consensus 75 ~Ys~~E~~~M~~dI~~~~~~GadG~V--fG~L~~dg-~iD~~~~~~Li~~a~~~~vtFHR 131 (146)
=++.+|+..+.+.+..+..+-..|+- ||.-+.+. .....+.+.+.+.+..++...|.
T Consensus 131 G~~~~~~~~~~~~i~~~~~l~l~Gl~th~~~~~~~~~~~~~~~~~~f~~~~~~l~~~~s~ 190 (357)
T 1rcq_A 131 GFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISL 190 (357)
T ss_dssp SBCHHHHHHHHHHHHHTTCEEEEEEECCCSSTTCTTCTHHHHHHHHHHHHHTTCCSCEEC
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEEcccCCCCCCcHHHHHHHHHHHHHHhccCCCeEE
Confidence 45677777666555543333233331 22211111 11235666777766654322443
No 434
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=58.72 E-value=77 Score=26.20 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=58.6
Q ss_pred HHHHHHHHcCCCEEEecC----CC----CCCCCCC------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCA----AL----SEGGLTP------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMA 85 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~----~l----~~GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~ 85 (146)
+.+..+.+.|.+.+++.- +. ..||+.| ....++.+++.++-.+.+||.. .++ ||.+|...+
T Consensus 155 ~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDa-n~~---~~~~~a~~~- 229 (410)
T 2qq6_A 155 AVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGPEVEVAIDM-HGR---FDIPSSIRF- 229 (410)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEEC-TTC---CCHHHHHHH-
T ss_pred HHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCCCCEEEEEC-CCC---CCHHHHHHH-
Confidence 566778889999999875 21 1344554 3466777777765445568888 654 566665444
Q ss_pred HHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 86 LDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
++.+.++|.+-+- .+-..-|.+.+++|.+.. ++|+.
T Consensus 230 --~~~l~~~~i~~iE----eP~~~~d~~~~~~l~~~~-~iPIa 265 (410)
T 2qq6_A 230 --ARAMEPFGLLWLE----EPTPPENLDALAEVRRST-STPIC 265 (410)
T ss_dssp --HHHHGGGCCSEEE----CCSCTTCHHHHHHHHTTC-SSCEE
T ss_pred --HHHHhhcCCCeEE----CCCChhhHHHHHHHHhhC-CCCEE
Confidence 4456677877432 111224677777776543 45553
No 435
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=58.63 E-value=55 Score=27.29 Aligned_cols=108 Identities=17% Similarity=0.084 Sum_probs=58.9
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC---CCcEEEEEc-------cCCCCCcc--cCHHHHH-HHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV---LVPVFVMIR-------VRAGFDFV--FSQAEKE-IMA 85 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~---~ipv~vMIR-------P~R~gdF~--Ys~~E~~-~M~ 85 (146)
.++.....+.|-.+|=-|.. -|..-....++.+.+.+ ++.|.+=== | .+.++. .+.+|+. .|.
T Consensus 52 ~~el~~~~~~G~~tiVd~t~---~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~~~~-~~~~~~~~~~~e~l~~~~~ 127 (363)
T 3ovg_A 52 IKEFKEFIDRGGSTIVTMDP---PNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAKFYD-KYSSWLAVVPTEEIVKMCV 127 (363)
T ss_dssp HHHHHHHHHTTEEEEEECCC---TTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGGGSC-TTTSHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEeCC---CccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCcccc-cCcHhhhcCCHHHHHHHHH
Confidence 45566667889999988874 34555667777776665 565543211 1 112222 2455665 556
Q ss_pred HHHHH-HHH----------cCC-CEEEEeeecCCCCcCHHHHHHH---HHHhC--CCCeEEee
Q psy7930 86 LDCHQ-FVE----------SGA-DGFVIGALTGEQEIDIEFIRQL---KTIIG--DRPITFHR 131 (146)
Q Consensus 86 ~dI~~-~~~----------~Ga-dG~VfG~L~~dg~iD~~~~~~L---i~~a~--~~~vtFHR 131 (146)
+||.. +-. .|+ .||+ ++=..++.+.....+.| +++|+ ++|+++|-
T Consensus 128 ~ei~~Gi~~~~~~gp~~~~t~ikaG~i-kig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~ 189 (363)
T 3ovg_A 128 AEIEEGMDEYNYNGPVVKRSKAKAGII-KAGTGYGAIDRLELKALEVAARTSILTGCPILVHT 189 (363)
T ss_dssp HHHHTCCBTTTTSSSCCCBCSCCCCEE-EEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHhcccccccccccccCCCccCCEE-EEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 66655 211 223 2443 43333445544444444 44444 89999995
No 436
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=58.59 E-value=5.1 Score=31.23 Aligned_cols=65 Identities=20% Similarity=0.278 Sum_probs=0.0
Q ss_pred CCCCC--CHHHHHHHHhhC-------CCcEEEEEccCCCCCcccC------HHHHHHHHHHHHHHHHcCCCEEEEeeecC
Q psy7930 42 GGLTP--TLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVFS------QAEKEIMALDCHQFVESGADGFVIGALTG 106 (146)
Q Consensus 42 GGlTP--S~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Ys------~~E~~~M~~dI~~~~~~GadG~VfG~L~~ 106 (146)
||..| +..+++.+.+.+ ++|-.++-.+ ...+..+- ++=.+.+.+.++.+.+.|+|.+|+.|-|.
T Consensus 9 GGmg~~at~~~~~~i~~~~~~~~~~~h~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~g~~~iviaCNTa 87 (231)
T 3ojc_A 9 GGMSWESTIPYYRMINQHVKAQLGGLHSAKIILYSV-DFHEIEQLQAKGDWQTAAQLLSNAAISLKHAGAEVIVVCTNTM 87 (231)
T ss_dssp ECTTHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEEC-CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCEEEECSSGG
T ss_pred ccCCHHHHHHHHHHHHHHhHHhcCCCCCccceeeCC-ChhhHHHHHHCCChhHHHHHHHHHHHHHHhcCCCEEEEeCCch
Q ss_pred C
Q psy7930 107 E 107 (146)
Q Consensus 107 d 107 (146)
+
T Consensus 88 ~ 88 (231)
T 3ojc_A 88 H 88 (231)
T ss_dssp G
T ss_pred H
No 437
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=58.41 E-value=21 Score=29.93 Aligned_cols=60 Identities=22% Similarity=0.171 Sum_probs=40.1
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEEE
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGFV 100 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~V 100 (146)
+...++.|+|-|++-..- .| | .+++.+++.+++||.+. |++ |.++. +.+.+.| +|.|.
T Consensus 248 a~~l~~~Gvd~i~v~~~~-~~---~--~~~~~ik~~~~iPvi~~------Ggi--t~e~a-------~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 248 ARELGKRGIAFICSRERE-AD---D--SIGPLIKEAFGGPYIVN------ERF--DKASA-------NAALASGKADAVA 306 (362)
T ss_dssp HHHHHHTTCSEEEEECCC-CT---T--CCHHHHHHHHCSCEEEE------SSC--CHHHH-------HHHHHTTSCSEEE
T ss_pred HHHHHHhCCCEEEECCCC-CC---H--HHHHHHHHHCCCCEEEe------CCC--CHHHH-------HHHHHcCCccEEE
Confidence 566778899999987532 22 1 45777788888986432 334 65443 3444556 99999
Q ss_pred Ee
Q psy7930 101 IG 102 (146)
Q Consensus 101 fG 102 (146)
||
T Consensus 307 iG 308 (362)
T 4ab4_A 307 FG 308 (362)
T ss_dssp ES
T ss_pred EC
Confidence 98
No 438
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=58.21 E-value=22 Score=29.04 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=55.0
Q ss_pred CHHHHHHH----HHcCCCEEEecCCCCCCCCCC---CHHHHHHHHhhC-CCcEEEEE-------ccCCCCCcccCHHHHH
Q psy7930 18 SVASALAA----VRGGADRLELCAALSEGGLTP---TLGLYRVIKRLV-LVPVFVMI-------RVRAGFDFVFSQAEKE 82 (146)
Q Consensus 18 s~~~a~~A----~~~GAdRIELc~~l~~GGlTP---S~g~i~~~~~~~-~ipv~vMI-------RP~R~gdF~Ys~~E~~ 82 (146)
|+++...| ...|.+.+-||-.=..-+.++ ....+...++.. ++|| |+ +| ||.--++...-+
T Consensus 144 t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk~~~~~~pV--~~D~sH~~q~p--~~~~~~~~g~~~ 219 (292)
T 1o60_A 144 SPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMKKASKGSPV--IFDVTHSLQCR--DPFGAASSGRRA 219 (292)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHHHHTTSCCE--EEEHHHHCC--------------CT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHHhhCCCCCE--EEECCCccccc--CccccCCCCChh
Confidence 44444444 346988999985311112322 456677777776 7885 55 34 444444444322
Q ss_pred HHHHHHHHHHHcCCCEEEEeeec------CC--CCcCHHHHHHHHHHhC
Q psy7930 83 IMALDCHQFVESGADGFVIGALT------GE--QEIDIEFIRQLKTIIG 123 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~------~d--g~iD~~~~~~Li~~a~ 123 (146)
....=...+..+||+|+++=.=- .| .+++.+.+++|++..+
T Consensus 220 ~~~~ia~aAva~Ga~Gl~IE~H~~~d~al~Dg~~sl~p~~l~~lv~~ir 268 (292)
T 1o60_A 220 QVTELARSGLAVGIAGLFLEAHPNPNQAKCDGPSALPLSALEGFVSQMK 268 (292)
T ss_dssp THHHHHHHHHHHCCSEEEEEEESSGGGCSSCCTTCEEGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCcccCCchhhcCCCHHHHHHHHHHHH
Confidence 22233335567999999986431 24 4688888898887664
No 439
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=58.12 E-value=26 Score=27.61 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeee---------cCCCCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 81 KEIMALDCHQFVESGADGFVIGAL---------TGEQEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~L---------~~dg~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
.+.+.+.++.+.+.|++.+=+-.- ...-.++.+.++++++.|+ ++++++|-
T Consensus 166 ~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~ 227 (403)
T 3gnh_A 166 PDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHA 227 (403)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 345566777888889987755321 1123589999999999997 89999994
No 440
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=57.89 E-value=60 Score=25.86 Aligned_cols=90 Identities=14% Similarity=0.182 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCC----HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPT----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
++-+..|++.|||-+=+..-+... || +..++.+.+.+++||.+-=-|.| .++.++.+.+..+.++ .
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~-tg~~l~~~~~~~La~~------~ 154 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVVPYYNK---PTQRGLYEHFKTVAQEVDIPIIIYNIPSR-TCVEISVDTMFKLASE------C 154 (294)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCCSCEEEEECHHH-HSCCCCHHHHHHHHHH------C
T ss_pred HHHHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCCcc-cCcCCCHHHHHHHHhh------C
Confidence 455677899999999988754432 44 23444556677999987777834 3478888877766422 2
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
+. |+|+=.. .-|..++.++++..+
T Consensus 155 --pn-ivgiKds--~gd~~~~~~~~~~~~ 178 (294)
T 2ehh_A 155 --EN-IVASKES--TPNMDRISEIVKRLG 178 (294)
T ss_dssp --TT-EEEEEEC--CSCHHHHHHHHHHHC
T ss_pred --CC-EEEEEeC--CCCHHHHHHHHHhcC
Confidence 22 6676433 447788889988775
No 441
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=57.87 E-value=1.4 Score=39.77 Aligned_cols=60 Identities=8% Similarity=0.026 Sum_probs=44.0
Q ss_pred CCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEee----e-cCCCCcCHHHH---HHHHHHhC--CCCeEE
Q psy7930 70 AGFDFVFSQAEKEIMALDCHQFVESGADGFVIGA----L-TGEQEIDIEFI---RQLKTIIG--DRPITF 129 (146)
Q Consensus 70 R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~----L-~~dg~iD~~~~---~~Li~~a~--~~~vtF 129 (146)
.+|++.|...--+.+.+|++.+|++|.+.|=+++ + -+.|..|.+-+ .++++.|+ |+.+..
T Consensus 25 ~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl 94 (612)
T 3d3a_A 25 KAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIV 94 (612)
T ss_dssp EEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEE
T ss_pred EEEEecCccCCHHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEE
Confidence 4566666544467999999999999999999993 3 34577777664 45588886 666654
No 442
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=57.84 E-value=39 Score=28.27 Aligned_cols=63 Identities=10% Similarity=0.009 Sum_probs=40.9
Q ss_pred HHHHHHcCCCEEEecCCC-CCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-CCEE
Q psy7930 22 ALAAVRGGADRLELCAAL-SEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-ADGF 99 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l-~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-adG~ 99 (146)
+...++.|+|-|++-..- ..-+ .|. . ++.+++.+++||.+ .|++ |.++.+ .+.+.| +|.|
T Consensus 272 a~~l~~~Gvd~i~v~~~~~~~~~-~~~-~-~~~ir~~~~iPvi~------~G~i--t~~~a~-------~~l~~g~aD~V 333 (379)
T 3aty_A 272 CKKIEPLSLAYLHYLRGDMVNQQ-IGD-V-VAWVRGSYSGVKIS------NLRY--DFEEAD-------QQIREGKVDAV 333 (379)
T ss_dssp HHHHGGGCCSEEEEECSCTTSCC-CCC-H-HHHHHTTCCSCEEE------ESSC--CHHHHH-------HHHHTTSCSEE
T ss_pred HHHHHHhCCCEEEEcCCCcCCCC-ccH-H-HHHHHHHCCCcEEE------ECCC--CHHHHH-------HHHHcCCCeEE
Confidence 455667899999997521 1001 233 5 88889989999743 3456 655444 344456 9999
Q ss_pred EEe
Q psy7930 100 VIG 102 (146)
Q Consensus 100 VfG 102 (146)
.||
T Consensus 334 ~ig 336 (379)
T 3aty_A 334 AFG 336 (379)
T ss_dssp EES
T ss_pred Eec
Confidence 998
No 443
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=57.73 E-value=8.2 Score=31.98 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=51.8
Q ss_pred HcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEE---E
Q psy7930 27 RGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFV---I 101 (146)
Q Consensus 27 ~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~V---f 101 (146)
+.||++|-||+. .|.+||. ..+++.+++.+++||.+---- ..| +. ......+.++|++-|= .
T Consensus 154 ~~G~~~i~l~Dt--~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn-~~G--------~a--~an~laA~~aGa~~vd~si~ 220 (320)
T 3dxi_A 154 DKIADLFCMVDS--FGGITPKEVKNLLKEVRKYTHVPVGFHGHD-NLQ--------LG--LINSITAIDDGIDFIDATIT 220 (320)
T ss_dssp TTTCSEEEEECT--TSCCCHHHHHHHHHHHHHHCCSCEEEECBC-TTS--------CH--HHHHHHHHHTTCSEEEEBGG
T ss_pred hCCCCEEEECcc--cCCCCHHHHHHHHHHHHHhCCCeEEEEeCC-CCc--------cH--HHHHHHHHHhCCCEEEEecc
Confidence 579999999994 6888996 678999999888887765544 223 11 1334446678887442 2
Q ss_pred eeecCCCCcCHHHHHHHHHH
Q psy7930 102 GALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 102 G~L~~dg~iD~~~~~~Li~~ 121 (146)
|.=-.-|..+++.+-..++.
T Consensus 221 GlG~~~GN~~~E~lv~~L~~ 240 (320)
T 3dxi_A 221 GMGRGAGNLKMELLLTYLNK 240 (320)
T ss_dssp GCSSTTCBCBHHHHHHHHHH
T ss_pred ccCCcccchhHHHHHHHHHh
Confidence 21122455666655555444
No 444
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=57.68 E-value=15 Score=29.02 Aligned_cols=75 Identities=19% Similarity=0.122 Sum_probs=46.6
Q ss_pred CCCCCHHHHHHHHhhCCCcEEE-EEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHH
Q psy7930 43 GLTPTLGLYRVIKRLVLVPVFV-MIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTI 121 (146)
Q Consensus 43 GlTPS~g~i~~~~~~~~ipv~v-MIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~ 121 (146)
...||+..+..+++.+++||-. =+-|.-.|-|. . | -.+.+++++|||.+.+|.= ....+...+.++++.
T Consensus 43 ~~~~~~~~L~~v~~~~~i~v~aQdv~~~~~Ga~T--G-e-----is~~~l~~~Ga~~Vllghs--eRR~~~~e~~~k~~~ 112 (225)
T 1hg3_A 43 VVAPQLVDLRMIAESVEIPVFAQHIDPIKPGSHT--G-H-----VLPEAVKEAGAVGTLLNHS--ENRMILADLEAAIRR 112 (225)
T ss_dssp EEECCHHHHHHHHHSCSSCBEESCCCSCCSBSCT--T-C-----CCHHHHHHTTCCEEEESCG--GGCCBHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHhcCCceeeeeCCcccCCCcc--C-c-----ccHHHHHHcCCCEEEECcc--hhcCCHHHHHHHHHH
Confidence 4679999999999988888621 01110011111 1 1 1267889999999999962 223444457888887
Q ss_pred hC--CCCe
Q psy7930 122 IG--DRPI 127 (146)
Q Consensus 122 a~--~~~v 127 (146)
|. ||.+
T Consensus 113 A~~~GL~~ 120 (225)
T 1hg3_A 113 AEEVGLMT 120 (225)
T ss_dssp HHHHTCEE
T ss_pred HHHCCCEE
Confidence 76 5553
No 445
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=57.67 E-value=11 Score=30.14 Aligned_cols=49 Identities=4% Similarity=-0.111 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeeec---------CCCCcC---HHHHHHHHHHhC--CCCeEE
Q psy7930 81 KEIMALDCHQFVESGADGFVIGALT---------GEQEID---IEFIRQLKTIIG--DRPITF 129 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~L~---------~dg~iD---~~~~~~Li~~a~--~~~vtF 129 (146)
-+.+++|++.++++|++.|=+.... ..|..| .+.+.++++.|+ |+.+.+
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil 103 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIM 103 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4678999999999999999776432 246677 566777888886 666543
No 446
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=57.57 E-value=11 Score=32.10 Aligned_cols=92 Identities=16% Similarity=0.110 Sum_probs=56.8
Q ss_pred HHcCCCEEEecCCCCCCCCCCCHHHH-----HHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC---C
Q psy7930 26 VRGGADRLELCAALSEGGLTPTLGLY-----RVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA---D 97 (146)
Q Consensus 26 ~~~GAdRIELc~~l~~GGlTPS~g~i-----~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga---d 97 (146)
...|-..+-||-. ||-||.+... .+..+..++|-.|||=|+++ .-.-+......+..++......|+ +
T Consensus 222 ~t~GN~~~~lilR---G~~~~ny~~~di~~~~~~l~~~~lp~~VivD~SH~-ns~k~~~~Q~~vv~~laa~ia~G~~~i~ 297 (350)
T 1n8f_A 222 NTSGNGDCHIILR---GGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHA-NSSKQFKKQMDVCADVCQQIAGGEKAII 297 (350)
T ss_dssp EECCCSCEEEEEC---CSSSCCCSHHHHHHHHHHHHHTTCCCCEEEECSGG-GTTTCGGGHHHHHHHHHHHHHTTCCSEE
T ss_pred ECCCCCCEEEEEC---CCCCCCCCHHHHHHHHHHHHHcCCCCeEEEECCCc-ccCccccccHHHHHHHHHHHHcCCCccc
Confidence 3457777888854 7777875322 21224458998889999553 323333344445677777788899 8
Q ss_pred EEEEeeecC-------------------CCCcCHHHHHHHHHH
Q psy7930 98 GFVIGALTG-------------------EQEIDIEFIRQLKTI 121 (146)
Q Consensus 98 G~VfG~L~~-------------------dg~iD~~~~~~Li~~ 121 (146)
|+.+=.=-. |.=|+++.+++|+..
T Consensus 298 GlmiEshl~dG~Q~l~~~~~l~yG~SITD~Ci~w~~t~~ll~~ 340 (350)
T 1n8f_A 298 GVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQ 340 (350)
T ss_dssp EEEEEBCSSSBBCCSSSCSCCCTTCBSSSCBBCHHHHHHHHHH
T ss_pred EEEEEeccCCCCcCCCCCccccCCCcCccccCCHHHHHHHHHH
Confidence 887643222 234677777777653
No 447
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=57.32 E-value=16 Score=30.54 Aligned_cols=66 Identities=6% Similarity=-0.047 Sum_probs=40.5
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCC---CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC-C
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTP---TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG-A 96 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTP---S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G-a 96 (146)
=+...++.|+|-|++-...... ..| ....++.+++.+++||.+ .|++ +.++.+ .+.+.| +
T Consensus 261 la~~le~~Gvd~i~v~~~~~~~-~~~~~~~~~~~~~vr~~~~iPvi~------~G~i--~~~~a~-------~~l~~g~a 324 (376)
T 1icp_A 261 MVESLNKYDLAYCHVVEPRMKT-AWEKIECTESLVPMRKAYKGTFIV------AGGY--DREDGN-------RALIEDRA 324 (376)
T ss_dssp HHHHHGGGCCSEEEEECCSCCC-------CCCCSHHHHHHCCSCEEE------ESSC--CHHHHH-------HHHHTTSC
T ss_pred HHHHHHHcCCCEEEEcCCcccC-CCCccccHHHHHHHHHHcCCCEEE------eCCC--CHHHHH-------HHHHCCCC
Confidence 3556678899999997532110 111 123567788888999743 3556 554444 344445 9
Q ss_pred CEEEEe
Q psy7930 97 DGFVIG 102 (146)
Q Consensus 97 dG~VfG 102 (146)
|.|.||
T Consensus 325 D~V~~g 330 (376)
T 1icp_A 325 DLVAYG 330 (376)
T ss_dssp SEEEES
T ss_pred cEEeec
Confidence 999998
No 448
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=57.29 E-value=10 Score=33.64 Aligned_cols=100 Identities=18% Similarity=0.097 Sum_probs=63.4
Q ss_pred HHHHHHHcCCCEE---EecCCCCCCCCCCCHHHHHHHH-------hhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRL---ELCAALSEGGLTPTLGLYRVIK-------RLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQ 90 (146)
Q Consensus 21 ~a~~A~~~GAdRI---ELc~~l~~GGlTPS~g~i~~~~-------~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~ 90 (146)
-+.....+|.|-| |...+ .=..|=..-+..+. +.++-.......- |.++.+.|.+-.+.
T Consensus 197 ~~ye~~~GGlDfIKDDE~l~~---Qpf~p~~eRv~~v~eai~rA~~eTGe~K~~~~Ni--------Ta~~~~eM~~Ra~~ 265 (493)
T 4f0h_A 197 VVYEALKGGLDFVKDDENINS---QPFMRWRERYLFVMEAVNKAAAATGEVKGHYLNV--------TAATMEEMYARAQL 265 (493)
T ss_dssp HHHHHHHHTCSEEECCTTCSS---BTTBCHHHHHHHHHHHHHHHHHHHSSCCEEEEEC--------CCSSHHHHHHHHHH
T ss_pred HHHHHHhcCCCccccccccCC---CCCccHHHHHHHHHHHHHHHHHhHCCcceEEeec--------CCCCHHHHHHHHHH
Confidence 3566777888888 54433 34455443333222 2233222112232 33467889999999
Q ss_pred HHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeecccCC
Q psy7930 91 FVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAFDVV 136 (146)
Q Consensus 91 ~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAFD~~ 136 (146)
++++|+..+.+=.++ | ..++..|.+.|+ ++++-.|||+-.+
T Consensus 266 a~e~G~~~vmvd~~~--G---~~a~~~La~~~r~~~l~LH~HRAghga 308 (493)
T 4f0h_A 266 AKELGSVIIMIDLVI--G---YTAIQTMAKWARDNDMILHLHRAGNST 308 (493)
T ss_dssp HHHHTCSEEEEEGGG--C---HHHHHHHHHHHHHHTCEEEEECTTTHH
T ss_pred HHhcCCCeEEEeccc--c---cchhHHHHHHHHHcCceEEeccCcccc
Confidence 999999988776554 4 567777777664 7999999998544
No 449
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=57.21 E-value=8.8 Score=26.48 Aligned_cols=40 Identities=13% Similarity=0.238 Sum_probs=26.4
Q ss_pred HHHHHcCCCEEEEee-ecCCCCcCH------HHHHHHHHHhCCCCeEEe
Q psy7930 89 HQFVESGADGFVIGA-LTGEQEIDI------EFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 89 ~~~~~~GadG~VfG~-L~~dg~iD~------~~~~~Li~~a~~~~vtFH 130 (146)
+.+++.+++++|+|. ++-||+.-. ...++|-.. ++|+.|+
T Consensus 45 ~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~--~lpV~~~ 91 (98)
T 1iv0_A 45 DFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRAR--GVEVELW 91 (98)
T ss_dssp HHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcC--CCCEEEE
Confidence 345667999999994 555776543 335555443 7888875
No 450
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=57.05 E-value=8.6 Score=31.15 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=45.9
Q ss_pred cceeEEEecCHH-----HHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhh--CCCcEEEEEccCCCCCcccCHHH
Q psy7930 9 KTTLEVCVDSVA-----SALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRL--VLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 9 ~~~lEvcv~s~~-----~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~--~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
+++||.|--+-+ -+..|.++|||-|--......||.||. ..+|+++.+. ++-++ =|-+ -|| .. |.++
T Consensus 138 KvIlEt~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~~v--~VKa-aGG-Ir-t~~~ 212 (260)
T 1p1x_A 138 KVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTV--GFKP-AGG-VR-TAED 212 (260)
T ss_dssp EEECCHHHHCSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTTTC--EEEC-BSS-CC-SHHH
T ss_pred EEEEecccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCCCc--eEEE-eCC-CC-CHHH
Confidence 347787776633 456788999999999998888888874 5677766543 22233 3456 565 32 2444
Q ss_pred HHHHH
Q psy7930 81 KEIMA 85 (146)
Q Consensus 81 ~~~M~ 85 (146)
...|.
T Consensus 213 al~~i 217 (260)
T 1p1x_A 213 AQKYL 217 (260)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 451
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=56.43 E-value=15 Score=31.20 Aligned_cols=60 Identities=2% Similarity=-0.083 Sum_probs=38.5
Q ss_pred CCCcEEEEEccCCCCCcccC--HHHHHHHHHHHHH-HHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 58 VLVPVFVMIRVRAGFDFVFS--QAEKEIMALDCHQ-FVESGADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 58 ~~ipv~vMIRP~R~gdF~Ys--~~E~~~M~~dI~~-~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
.++||.|||.| = +-|. .+++..+.+.+.. +...|++.+.||+++= .+-.+..+.+.++-.
T Consensus 252 aGipv~v~iaP-I---iP~~~~~e~y~~lle~l~~~l~~~~~~~v~~e~i~l--R~~~~~~~~i~~~~P 314 (368)
T 4fhd_A 252 AGYKLGFVVAP-I---YRHEGWERGYFELFQELARQLEGMDLSDLTFELIQH--RFTKPAKRVIEQRYP 314 (368)
T ss_dssp TTCEEEEEEEE-E---CCCTTHHHHHHHHHHHHHHHTTTSCCTTCEEEEEEC--CBCHHHHHHHHHHST
T ss_pred CCCeEEEEEeC-c---CCCCCCHHHHHHHHHHHHHhhchhhcceEEEEEEEE--EcCHHHHHHHHHhCC
Confidence 59999999998 2 2232 3567777777665 4557777777775432 255666665555533
No 452
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=56.26 E-value=45 Score=25.39 Aligned_cols=75 Identities=20% Similarity=0.035 Sum_probs=50.2
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccC-CCCCcccCHHHHHHHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVR-AGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~-R~gdF~Ys~~E~~~M~~dI~ 89 (146)
++=+...|.++ +...+. ||=|||.-.+-..- ++ ..++|+.+-+|++ -||.|..++++.-.+.+
T Consensus 2 ~vpl~~~t~~~-~~~~~~-aD~vElRvD~l~~~----------lr-~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~--- 65 (196)
T 2ox1_A 2 KLVATLSSPEE-LELAEK-ADVVELRIDLFDFS----------GA-RVDKEKILTCRRVSDGGKFEGDERERIEKMK--- 65 (196)
T ss_dssp EEEEEECSHHH-HHHTTT-CSEEEEETTTSCCT----------TS-CCCSEEEEECCBGGGTSSBCSCHHHHHHHHH---
T ss_pred eeeEcCCCHHH-HHHHhc-CCEEEEEEchhhhh----------HH-hcCCcEEEEEeecccCCCCCCCHHHHHHHHH---
Confidence 34567778888 555554 99999998765421 23 5679999999962 46778888777665544
Q ss_pred HHHHcCC-CEEEE
Q psy7930 90 QFVESGA-DGFVI 101 (146)
Q Consensus 90 ~~~~~Ga-dG~Vf 101 (146)
.+.++|+ |-+-+
T Consensus 66 ~~~~~g~~d~iDv 78 (196)
T 2ox1_A 66 RAFDSLNPDYVDL 78 (196)
T ss_dssp HHHHHHCCSEEEE
T ss_pred HHHHhCCCcEEEE
Confidence 4455666 54443
No 453
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=56.19 E-value=80 Score=25.63 Aligned_cols=109 Identities=6% Similarity=-0.034 Sum_probs=52.5
Q ss_pred HHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEcc----CCCCCcc------cCHHHHHHHHHHHHHH
Q psy7930 22 ALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRV----RAGFDFV------FSQAEKEIMALDCHQF 91 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP----~R~gdF~------Ys~~E~~~M~~dI~~~ 91 (146)
+..+.++|..-+.-.......+.. ...+.++.+..++...+...+ ...|.|. ..++.++...+-++.+
T Consensus 139 ~~~~l~~GvTtv~d~~~~~~~~~~--~~~~~~~~~~~g~r~~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~~~~~~~ 216 (479)
T 3h4u_A 139 MAELLQSGCTTSSDHLYIYPNGSR--LDDSIGAAQRIGMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETY 216 (479)
T ss_dssp HHHHHTTTEEEEECCBCCCCTTCC--HHHHHHHHHHHTCEEEEEEEECC----------------CHHHHHHHHHHHHHH
T ss_pred HHHHHhCCeEEEEECccccCCcch--HHHHHHHHHHcCCEEEEEeeecccccccccCCcccccccHHHHHHHHHHHHHHh
Confidence 455677898888765332222221 222333333345544333222 0111111 1123333333333333
Q ss_pred HHcCCCEEEEeeecC--CCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 92 VESGADGFVIGALTG--EQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 92 ~~~GadG~VfG~L~~--dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
...+-+|++-..+.+ ....+.+.++++++.|+ ++++++|-.
T Consensus 217 ~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~ 261 (479)
T 3h4u_A 217 HDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLA 261 (479)
T ss_dssp CCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred hccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeC
Confidence 322223444333433 34678899999999987 899999963
No 454
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=56.15 E-value=69 Score=26.10 Aligned_cols=85 Identities=15% Similarity=0.056 Sum_probs=55.4
Q ss_pred ccceeEEEecCHHHHHHHHHcCCCEEEecCC-C-------CCCCCCCCHHHHH---HHHhhCCCcEEEEEc-cCCCCCcc
Q psy7930 8 NKTTLEVCVDSVASALAAVRGGADRLELCAA-L-------SEGGLTPTLGLYR---VIKRLVLVPVFVMIR-VRAGFDFV 75 (146)
Q Consensus 8 ~~~~lEvcv~s~~~a~~A~~~GAdRIELc~~-l-------~~GGlTPS~g~i~---~~~~~~~ipv~vMIR-P~R~gdF~ 75 (146)
+.++.=.++.|.-+|+.+++.|.+=|=+=+. + .-+|+.+--..+. .+.+.+++|| +.= | .| |-
T Consensus 20 ~~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~Pv--iaD~d--~G-yg 94 (287)
T 3b8i_A 20 SRCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPV--IADAD--HG-YG 94 (287)
T ss_dssp SCCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCE--EEECT--TC-SS
T ss_pred CCcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCE--EEECC--CC-CC
Confidence 3466778999999999999999998866543 2 2224444333443 3445567885 443 4 34 43
Q ss_pred cCHHHHHHHHHHHHHHHHcCCCEEEE
Q psy7930 76 FSQAEKEIMALDCHQFVESGADGFVI 101 (146)
Q Consensus 76 Ys~~E~~~M~~dI~~~~~~GadG~Vf 101 (146)
+. +...+-++.+.+.|+.|+-+
T Consensus 95 -~~---~~~~~~v~~l~~aGa~gv~i 116 (287)
T 3b8i_A 95 -NA---LNVMRTVVELERAGIAALTI 116 (287)
T ss_dssp -SH---HHHHHHHHHHHHHTCSEEEE
T ss_pred -CH---HHHHHHHHHHHHhCCeEEEE
Confidence 33 33446677777899999876
No 455
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=55.95 E-value=5.2 Score=32.34 Aligned_cols=74 Identities=16% Similarity=0.167 Sum_probs=43.5
Q ss_pred HHHHHHcCCCEEEec---CCCCCC--------------CCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHH
Q psy7930 22 ALAAVRGGADRLELC---AALSEG--------------GLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKE 82 (146)
Q Consensus 22 a~~A~~~GAdRIELc---~~l~~G--------------GlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~ 82 (146)
+...+++|||-|||- |+.-.. |+|+. +.+++++++ ++|+.+|--= .--|.|.-+.|
T Consensus 34 ~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~--~~Pivlm~Y~--N~i~~~G~e~F- 108 (252)
T 3tha_A 34 LQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKT--KKALVFMVYY--NLIFSYGLEKF- 108 (252)
T ss_dssp HHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCC--SSEEEEECCH--HHHHHHCHHHH-
T ss_pred HHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhc--CCCEEEEecc--CHHHHhhHHHH-
Confidence 444567899999996 333222 44432 233333332 3899998641 01245554444
Q ss_pred HHHHHHHHHHHcCCCEEEEeeec
Q psy7930 83 IMALDCHQFVESGADGFVIGALT 105 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~ 105 (146)
++.+++.|+||+++-=|-
T Consensus 109 -----~~~~~~aGvdG~IipDLP 126 (252)
T 3tha_A 109 -----VKKAKSLGICALIVPELS 126 (252)
T ss_dssp -----HHHHHHTTEEEEECTTCC
T ss_pred -----HHHHHHcCCCEEEeCCCC
Confidence 567888999998775443
No 456
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=55.91 E-value=25 Score=26.17 Aligned_cols=45 Identities=13% Similarity=0.259 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHcCCCEEEEeeecCC-CCcCHHHHHHHHHHhCCCCeEE
Q psy7930 83 IMALDCHQFVESGADGFVIGALTGE-QEIDIEFIRQLKTIIGDRPITF 129 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~~d-g~iD~~~~~~Li~~a~~~~vtF 129 (146)
...+.++.+.+.++||+++-..+.+ ...+.+.++++.+ .+.|+++
T Consensus 59 ~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~--~~iPvV~ 104 (298)
T 3tb6_A 59 NERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEK--NGIPFAM 104 (298)
T ss_dssp HHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHH--TTCCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHh--cCCCEEE
Confidence 3456677888999999998654432 2245566666654 4788654
No 457
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=55.90 E-value=8.1 Score=32.86 Aligned_cols=53 Identities=9% Similarity=0.129 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeee-----cCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGAL-----TGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L-----~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+.+...++|+.+.++|+.||.|..- ...-.+|-+.+..+.++|. +++|.+|-.
T Consensus 173 d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g 232 (423)
T 4dzi_A 173 DPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLS 232 (423)
T ss_dssp SHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCC
Confidence 3455668888888999999998521 1122477788888988886 899999976
No 458
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=55.76 E-value=29 Score=27.91 Aligned_cols=68 Identities=19% Similarity=0.327 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCC-----HHHHHHHHhhCCCcEEEEEccCCCCCcccC-HHHHHHHHHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPT-----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFS-QAEKEIMALDCHQFV 92 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS-----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys-~~E~~~M~~dI~~~~ 92 (146)
.+-+....+.+-.-|=+.+....-|..-. ..+++.+++..++||.| +|--+ .+. ++.+.
T Consensus 154 ~eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v--------GfGIst~e~-------a~~~~ 218 (252)
T 3tha_A 154 KERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV--------GFGIQNNQD-------VKRMR 218 (252)
T ss_dssp HHHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE--------ESSCCSHHH-------HHHHT
T ss_pred HHHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE--------EcCcCCHHH-------HHHHH
Confidence 45556566665566655554443344322 34677777777888866 24443 333 33344
Q ss_pred HcCCCEEEEe
Q psy7930 93 ESGADGFVIG 102 (146)
Q Consensus 93 ~~GadG~VfG 102 (146)
+ +|||+|+|
T Consensus 219 ~-~ADGVIVG 227 (252)
T 3tha_A 219 K-VADGVIVG 227 (252)
T ss_dssp T-TSSEEEEC
T ss_pred h-cCCEEEEC
Confidence 4 69999999
No 459
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=55.55 E-value=9.9 Score=30.42 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=33.8
Q ss_pred HHHHHHH-HcCCCEEEEeeecCC-----CCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 86 LDCHQFV-ESGADGFVIGALTGE-----QEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 86 ~dI~~~~-~~GadG~VfG~L~~d-----g~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
++++.+. +.|+.||-+|.-... ..++-+....+.++|. ++++.+|-.
T Consensus 126 ~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~ 180 (350)
T 2gwg_A 126 PELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVS 180 (350)
T ss_dssp HHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCC
T ss_pred HHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCC
Confidence 4445554 689999988742111 2477788889998886 899999964
No 460
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=55.49 E-value=20 Score=30.73 Aligned_cols=77 Identities=10% Similarity=-0.013 Sum_probs=48.9
Q ss_pred HHHcCCCEEEecCC-CCCCCCCCC---------HHHHHHHHhhCCCcEEEE----E-cc-CCCCCcccCHHH-----HHH
Q psy7930 25 AVRGGADRLELCAA-LSEGGLTPT---------LGLYRVIKRLVLVPVFVM----I-RV-RAGFDFVFSQAE-----KEI 83 (146)
Q Consensus 25 A~~~GAdRIELc~~-l~~GGlTPS---------~g~i~~~~~~~~ipv~vM----I-RP-~R~gdF~Ys~~E-----~~~ 83 (146)
+.+.|.+-||+-.. +...|.++. ...+++..+..++++... . -| -..|.++=.+.+ ++.
T Consensus 89 ~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~~~~t~nl~~h~~y~~G~~~spd~evR~~ai~~ 168 (438)
T 1a0c_A 89 FDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGASTSCNADVFAYSAAQ 168 (438)
T ss_dssp HHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSGGGTTCSTTCSCHHHHHHHHHH
T ss_pred HHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCceEeccccccCCCccccCCCCCCCHHHHHHHHHH
Confidence 88899999999532 122333331 234555556667776441 1 22 013555443444 589
Q ss_pred HHHHHHHHHHcCCCEEEE
Q psy7930 84 MALDCHQFVESGADGFVI 101 (146)
Q Consensus 84 M~~dI~~~~~~GadG~Vf 101 (146)
+++.|+.++++|++.+||
T Consensus 169 lk~aId~A~~LGa~~vv~ 186 (438)
T 1a0c_A 169 VKKALEITKELGGENYVF 186 (438)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 999999999999999998
No 461
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=55.23 E-value=7.9 Score=31.52 Aligned_cols=21 Identities=24% Similarity=0.180 Sum_probs=19.1
Q ss_pred cCHHHHHHHHHcCCCEEEecC
Q psy7930 17 DSVASALAAVRGGADRLELCA 37 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~ 37 (146)
-+.+.+.+|.+.||+||||-.
T Consensus 136 pd~~qi~aA~~~GA~~IELhT 156 (243)
T 1m5w_A 136 ADEEQIKAAAEVGAPFIEIHT 156 (243)
T ss_dssp SCHHHHHHHHHTTCSEEEEEC
T ss_pred CCHHHHHHHHHhCcCEEEEec
Confidence 378999999999999999986
No 462
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=55.15 E-value=31 Score=26.51 Aligned_cols=63 Identities=22% Similarity=0.206 Sum_probs=42.3
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCCEE
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGADGF 99 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~GadG~ 99 (146)
-+.++.++|.+-||+-.. ||+ ...++++++... . +.| - .|. +.++ ++++.+.++||||+
T Consensus 33 ~~~al~~gGv~~iel~~k------~~~~~~~i~~l~~~~~-~--~~v-g--agt-vi~~-------d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 33 MAKALVAGGVRVLNVTLR------TECAVDAIRAIAKEVP-E--AIV-G--AGT-VLNP-------QQLAEVTEAGAQFA 92 (214)
T ss_dssp HHHHHHHTTCCEEEEESC------STTHHHHHHHHHHHCT-T--SEE-E--EES-CCSH-------HHHHHHHHHTCSCE
T ss_pred HHHHHHHcCCCEEEEeCC------ChhHHHHHHHHHHHCc-C--CEE-e--eCE-EEEH-------HHHHHHHHcCCCEE
Confidence 467788999999999853 343 456776666553 1 122 2 233 4555 56677889999999
Q ss_pred EEee
Q psy7930 100 VIGA 103 (146)
Q Consensus 100 VfG~ 103 (146)
+.|-
T Consensus 93 ~~p~ 96 (214)
T 1wbh_A 93 ISPG 96 (214)
T ss_dssp EESS
T ss_pred EcCC
Confidence 9774
No 463
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=54.90 E-value=57 Score=25.68 Aligned_cols=79 Identities=16% Similarity=0.124 Sum_probs=51.3
Q ss_pred ecCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCC------cEEEEEccCCCCCcccCHHHHHHHHHHHH
Q psy7930 16 VDSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLV------PVFVMIRVRAGFDFVFSQAEKEIMALDCH 89 (146)
Q Consensus 16 v~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~i------pv~vMIRP~R~gdF~Ys~~E~~~M~~dI~ 89 (146)
|-|.+++..|.++||+-|=. =|+ +..+++.++++ ++ |+. | | +.|..|+.
T Consensus 72 Vlt~~~a~~ai~AGA~fivs------P~~--~~evi~~~~~~-~v~~~~~~~~~----P---G--~~TptE~~------- 126 (217)
T 3lab_A 72 VCTADDFQKAIDAGAQFIVS------PGL--TPELIEKAKQV-KLDGQWQGVFL----P---G--VATASEVM------- 126 (217)
T ss_dssp CCSHHHHHHHHHHTCSEEEE------SSC--CHHHHHHHHHH-HHHCSCCCEEE----E---E--ECSHHHHH-------
T ss_pred ccCHHHHHHHHHcCCCEEEe------CCC--cHHHHHHHHHc-CCCccCCCeEe----C---C--CCCHHHHH-------
Confidence 55899999999999999932 123 45678777664 55 653 3 2 35566544
Q ss_pred HHHHcCCCEEEEeeecCCCCc-CHHHHHHHHHHh
Q psy7930 90 QFVESGADGFVIGALTGEQEI-DIEFIRQLKTII 122 (146)
Q Consensus 90 ~~~~~GadG~VfG~L~~dg~i-D~~~~~~Li~~a 122 (146)
.+.++|+|.+=| .+-..+ ..+.++.|....
T Consensus 127 ~A~~~Gad~vK~---FPa~~~gG~~~lkal~~p~ 157 (217)
T 3lab_A 127 IAAQAGITQLKC---FPASAIGGAKLLKAWSGPF 157 (217)
T ss_dssp HHHHTTCCEEEE---TTTTTTTHHHHHHHHHTTC
T ss_pred HHHHcCCCEEEE---CccccccCHHHHHHHHhhh
Confidence 468899998843 565444 456666555433
No 464
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=54.89 E-value=86 Score=25.61 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=66.3
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh------CCCcEEEEEccCCCCC--------cccC-HHHH
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL------VLVPVFVMIRVRAGFD--------FVFS-QAEK 81 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~------~~ipv~vMIRP~R~gd--------F~Ys-~~E~ 81 (146)
.|++.+..|.+.|-+-+=+= |-.-|=-.=++..++. .+++|-.=|=- -||. =.|| ++|.
T Consensus 91 ~~~e~i~~ai~~GFtSVMiD-----gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~-vgG~Ed~~~~~~~~yT~Peea 164 (288)
T 3q94_A 91 SSFEKCKEAIDAGFTSVMID-----ASHHPFEENVETTKKVVEYAHARNVSVEAELGT-VGGQEDDVIAEGVIYADPAEC 164 (288)
T ss_dssp CSHHHHHHHHHHTCSEEEEC-----CTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESB-CBCSCSSCGGGGCBCCCHHHH
T ss_pred CCHHHHHHHHHcCCCeEEEe-----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeee-eccccCCcCCccccCCCHHHH
Confidence 58999999999997666443 2233433444444432 36666665544 3432 2455 4443
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeecCCC------CcCHHHHHHHHHHhCCCCeEEeec
Q psy7930 82 EIMALDCHQFVESGADGFVIGALTGEQ------EIDIEFIRQLKTIIGDRPITFHRA 132 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L~~dg------~iD~~~~~~Li~~a~~~~vtFHRA 132 (146)
.. ..++.|+|-+.+.+=|..| .||.++++++-+.. ++|+++|=+
T Consensus 165 ~~------Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v-~vpLVlHGg 214 (288)
T 3q94_A 165 KH------LVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT-GVPLVLHGG 214 (288)
T ss_dssp HH------HHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH-CSCEEECCC
T ss_pred HH------HHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc-CCCEEEeCC
Confidence 33 3346899988776555554 59999999998887 599999954
No 465
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=54.88 E-value=33 Score=29.17 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=0.0
Q ss_pred CHHHHHHHHHc----CCCEEEecCC-CCCCCC----CCCHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 18 SVASALAAVRG----GADRLELCAA-LSEGGL----TPTLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 18 s~~~a~~A~~~----GAdRIELc~~-l~~GGl----TPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
++++...|.+. |.+.|=||-. -+.--. +.....+...++..++|| +.=| ..+...-+....=.
T Consensus 261 t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV--~~D~------th~~G~r~~v~~~a 332 (385)
T 3nvt_A 261 TIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPV--MVDV------THSTGRKDLLLPCA 332 (385)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCE--EEEH------HHHHCCGGGHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCE--EEcC------CCCCCccchHHHHH
Q ss_pred HHHHHcCCCEEEE--------eeecCCCCcCHHHHHHHHHHhC
Q psy7930 89 HQFVESGADGFVI--------GALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 89 ~~~~~~GadG~Vf--------G~L~~dg~iD~~~~~~Li~~a~ 123 (146)
..+..+||||+++ -.-+...+++.+.+++|++..+
T Consensus 333 ~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~ 375 (385)
T 3nvt_A 333 KAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAIL 375 (385)
T ss_dssp HHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHH
No 466
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=54.79 E-value=14 Score=30.87 Aligned_cols=42 Identities=19% Similarity=0.315 Sum_probs=31.2
Q ss_pred HHHcCCCEEEEeeecC-------CCCcCHHHHHHHHHHhC-CCCeEEeec
Q psy7930 91 FVESGADGFVIGALTG-------EQEIDIEFIRQLKTIIG-DRPITFHRA 132 (146)
Q Consensus 91 ~~~~GadG~VfG~L~~-------dg~iD~~~~~~Li~~a~-~~~vtFHRA 132 (146)
+.+.|+|-+.+.+=|. .-.||.++++++-+..+ ++|++||=+
T Consensus 180 Fv~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGg 229 (306)
T 3pm6_A 180 FVATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGA 229 (306)
T ss_dssp HHTTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSC
T ss_pred HHHcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCC
Confidence 3358999665543333 24699999999999885 899999943
No 467
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=54.75 E-value=9.1 Score=34.98 Aligned_cols=100 Identities=13% Similarity=0.197 Sum_probs=66.9
Q ss_pred HHHcCCCEEEecCCCCC---CC-CCCCHH-HHHHHHhhC---CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCC
Q psy7930 25 AVRGGADRLELCAALSE---GG-LTPTLG-LYRVIKRLV---LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGA 96 (146)
Q Consensus 25 A~~~GAdRIELc~~l~~---GG-lTPS~g-~i~~~~~~~---~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Ga 96 (146)
|.+.|-+-+-+...-.. |. ++|... -|+++.++. +|-+.+-.-. ++ | -++|.++.+.+++.|+
T Consensus 318 Aa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~-~~----~----~~~~~~~~~~~~~~Gv 388 (641)
T 3a24_A 318 ASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGY-HA----F----ERDMENVCRHYAEMGV 388 (641)
T ss_dssp HHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEH-HH----H----HTSHHHHHHHHHHHTC
T ss_pred HHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeC-cc----h----HHHHHHHHHHHHHcCC
Confidence 88889999988664432 11 455332 244444433 4544444444 22 2 2568999999999999
Q ss_pred CEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeecc
Q psy7930 97 DGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAF 133 (146)
Q Consensus 97 dG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAF 133 (146)
+||=+|+...|.+-=.....++++.|. ++-|-||=++
T Consensus 389 ~gvK~Df~~~~~Q~~v~~y~~i~~~aA~~~l~V~fHg~~ 427 (641)
T 3a24_A 389 KGFKVDFMDRDDQEMTAFNYRAAEMCAKYKLILDLHGTH 427 (641)
T ss_dssp CEEEEECCCCCSHHHHHHHHHHHHHHHHTTCEEEECSCC
T ss_pred CEEEECCCCCCcHHHHHHHHHHHHHHHHcCCEEEcCCCc
Confidence 999999998887666666666666653 7889999654
No 468
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=54.68 E-value=41 Score=25.34 Aligned_cols=66 Identities=11% Similarity=0.015 Sum_probs=40.6
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCH-------HHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTL-------GLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDC 88 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~-------g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI 88 (146)
.+..|.+.||..|-+.......+. ++. ..++.+.+.. .--|.+.|-| ..+.|..|.+++..+.+.+
T Consensus 89 ~i~~A~~lG~~~v~~~~g~~~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~-~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAGQKGSAD-FSQQERQEYVNRIRMICELFAQHNMYVLLET-HPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHHHHTCCEEEECSCSSCGGG-SCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC-CTTSTTSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEcCCCCCccc-CcHHHHHHHHHHHHHHHHHHHHhCCEEEEec-CCCcCcCCHHHHHHHHHhc
Confidence 455678889999988754322221 122 2222222221 2346778888 8888999988888777765
No 469
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=54.29 E-value=9.8 Score=31.30 Aligned_cols=101 Identities=8% Similarity=-0.006 Sum_probs=56.9
Q ss_pred HHHHHHHcCCCEEEecCCCC---CCCCCCCHHHHH-------HHHhhCCCc---EEEEEccCCCCCcccCHHHHHHHHHH
Q psy7930 21 SALAAVRGGADRLELCAALS---EGGLTPTLGLYR-------VIKRLVLVP---VFVMIRVRAGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~---~GGlTPS~g~i~-------~~~~~~~ip---v~vMIRP~R~gdF~Ys~~E~~~M~~d 87 (146)
-+..+.+-|...+|+-.+.. ..|+|+. ..++ ++++..+|. |.++.|- .+.++.....+.
T Consensus 83 ~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~-~~v~~v~~~~~~a~~~~gi~~~lI~~~~R~-------~~~~~a~~~~~~ 154 (326)
T 3pao_A 83 YLQKCKAQNVVHVEPFFDPQTHTDRGIPFE-VVLAGIRAALRDGEKLLGIRHGLILSFLRH-------LSEEQAQKTLDQ 154 (326)
T ss_dssp HHHHHHHTTEEEECCEECHHHHHTTTCCHH-HHHHHHHHHHHHHHHHHCCEECCEEEEETT-------SCHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEEEChHHhccCCCCHH-HHHHHHHHHHHHHHhhCceEEEEEEEeCCC-------CCHHHHHHHHHH
Confidence 34556788999999976532 3577653 2222 222334554 3444454 235555555555
Q ss_pred HHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 88 CHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 88 I~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
...+++ ++.||=+. -+...-..+..++..+.|+ |+++|+|=.
T Consensus 155 a~~~~~-~vvG~dL~--g~E~~~~~~~~~~~~~~A~~~gl~~~~Hag 198 (326)
T 3pao_A 155 ALPFRD-AFIAVGLD--SSEVGHPPSKFQRVFDRARSEGFLTVAHAG 198 (326)
T ss_dssp HGGGGG-GCSEEEEE--SCCTTCCGGGGHHHHHHHHHTTCEECEEES
T ss_pred Hhhccc-cceeeCCC--CCCCCCCHHHHHHHHHHHHHcCCceeeecC
Confidence 555554 67775432 2333344555667777665 899999973
No 470
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=54.24 E-value=18 Score=29.90 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeecCC-----------CCcC------HHHHHHHHHHhC--CCCeEEeecccC
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGALTGE-----------QEID------IEFIRQLKTIIG--DRPITFHRAFDV 135 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L~~d-----------g~iD------~~~~~~Li~~a~--~~~vtFHRAFD~ 135 (146)
.++-+.+-+..++++|+++|-+--+.+. ..|| .+.+++|+++|+ |+.|.+--.+.+
T Consensus 19 ~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH 93 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINH 93 (405)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCc
Confidence 4888888899999999999988765542 2566 788999999997 888877443333
No 471
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=54.20 E-value=86 Score=25.39 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=64.5
Q ss_pred cceeEEEecCHHHHHHHHHcCCCEEEecC-CCC---CC---CCCCCHHHH----HHHHhhCCCcEEEEEccCCCCCcccC
Q psy7930 9 KTTLEVCVDSVASALAAVRGGADRLELCA-ALS---EG---GLTPTLGLY----RVIKRLVLVPVFVMIRVRAGFDFVFS 77 (146)
Q Consensus 9 ~~~lEvcv~s~~~a~~A~~~GAdRIELc~-~l~---~G---GlTPS~g~i----~~~~~~~~ipv~vMIRP~R~gdF~Ys 77 (146)
..+.=.++.+..+|..+.++|.|=| |.. ++. .| ++--+...+ +.+.+..+.|..+-==| .|+|. |
T Consensus 17 ~~i~~~tayD~~sA~l~e~aG~d~i-lvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~p--fgsy~-~ 92 (264)
T 1m3u_A 17 KRFATITAYDYSFAKLFADEGLNVM-LVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLP--FMAYA-T 92 (264)
T ss_dssp CCEEEEECCSHHHHHHHHHHTCCEE-EECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECC--TTSSS-S
T ss_pred CcEEEEeCcCHHHHHHHHHcCCCEE-EECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECC--CCCcC-C
Confidence 4677789999999999999999999 544 331 11 112233333 33445566666553346 56666 5
Q ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEEe
Q psy7930 78 QAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITFH 130 (146)
Q Consensus 78 ~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtFH 130 (146)
.+ +..+.+..+.+.||+||=+ +||.-=.+.++.+++ .+.|+.=|
T Consensus 93 ~~---~a~~~a~rl~kaGa~aVkl----Egg~e~~~~I~al~~--agipV~gH 136 (264)
T 1m3u_A 93 PE---QAFENAATVMRAGANMVKI----EGGEWLVETVQMLTE--RAVPVCGH 136 (264)
T ss_dssp HH---HHHHHHHHHHHTTCSEEEC----CCSGGGHHHHHHHHH--TTCCEEEE
T ss_pred HH---HHHHHHHHHHHcCCCEEEE----CCcHHHHHHHHHHHH--CCCCeEee
Confidence 43 2334445555599998743 455433555555554 35666544
No 472
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=54.05 E-value=12 Score=30.46 Aligned_cols=74 Identities=20% Similarity=0.273 Sum_probs=49.0
Q ss_pred cceeEEEecCHHHH----HHHHHcCCCEEEecCCCCCCCCCC-CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 9 KTTLEVCVDSVASA----LAAVRGGADRLELCAALSEGGLTP-TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 9 ~~~lEvcv~s~~~a----~~A~~~GAdRIELc~~l~~GGlTP-S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
++++|.|--+.+.. ..|.++|||-|--......||.|| ...+|+++. +-++ =|-+ -|| -. |.
T Consensus 162 KVIlEt~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~v---g~~v--~VKa-AGG-Ir-t~----- 228 (260)
T 3r12_A 162 KVIIETCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIV---GDEM--GVKA-SGG-IR-TF----- 228 (260)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHH---CTTS--EEEE-ESS-CC-SH-----
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHh---CCCc--eEEE-eCC-CC-CH-----
Confidence 56788887777554 456678999999999888888887 455665543 3333 2344 455 21 33
Q ss_pred HHHHHHHHHHcCCC
Q psy7930 84 MALDCHQFVESGAD 97 (146)
Q Consensus 84 M~~dI~~~~~~Gad 97 (146)
+|...+.++||+
T Consensus 229 --~~al~mi~aGA~ 240 (260)
T 3r12_A 229 --EDAVKMIMYGAD 240 (260)
T ss_dssp --HHHHHHHHTTCS
T ss_pred --HHHHHHHHcCCc
Confidence 444555889999
No 473
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=53.91 E-value=22 Score=29.66 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=39.4
Q ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEeeecCC-CCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 77 SQAEKEIMALDCHQFVESGADGFVIGALTGE-QEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 77 s~~E~~~M~~dI~~~~~~GadG~VfG~L~~d-g~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
+.++++.|+.-++...+.|+++|..|...+. ...+.+.+.++++.++ +.++..|-.
T Consensus 177 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~ 235 (496)
T 1rk6_A 177 TADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMR 235 (496)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECS
T ss_pred CHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeC
Confidence 5678888888888888899999887654322 2456666777765554 677888853
No 474
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=53.91 E-value=21 Score=26.80 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeecC
Q psy7930 82 EIMALDCHQFVESGADGFVIGALTG 106 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L~~ 106 (146)
..|.+.++.+.+.|+|.+|++|-+.
T Consensus 62 ~~l~~~~~~l~~~g~d~iviaCnta 86 (228)
T 2eq5_A 62 PKIIRLAKEFEREGVDAIIISCAAD 86 (228)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCch
Confidence 3677778888899999999999655
No 475
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=53.87 E-value=52 Score=26.18 Aligned_cols=89 Identities=11% Similarity=0.117 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCC----HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPT----LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS----~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
++-+..|++.|||-+=+..-+... || +..++.+.+.+++||.+-=-|.| .++.++.+.+..+.+ +.
T Consensus 85 i~la~~a~~~Gadavlv~~P~y~~---~s~~~l~~~f~~ia~a~~lPiilYn~P~~-tg~~l~~~~~~~La~------~~ 154 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSITPYYNK---PTQEGLRKHFGKVAESINLPIVLYNVPSR-TAVNLEPKTVKLLAE------EY 154 (289)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSC---CCHHHHHHHHHHHHHHCSSCEEEEECHHH-HSCCCCHHHHHHHHH------HC
T ss_pred HHHHHHHHhcCCCEEEECCCCCCC---CCHHHHHHHHHHHHHhcCCCEEEEeCccc-cCcCCCHHHHHHHHH------hC
Confidence 455677889999999888754432 44 23444555677899987777834 447888887776642 22
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHh
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTII 122 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a 122 (146)
+. |+|+=...| |..++.++++..
T Consensus 155 --pn-ivgiK~s~g--d~~~~~~~~~~~ 177 (289)
T 2yxg_A 155 --SN-ISAVKEANP--NLSQVSELIHDA 177 (289)
T ss_dssp --TT-EEEEEECCS--CTHHHHHHHHHT
T ss_pred --CC-EEEEEeCCC--CHHHHHHHHHhC
Confidence 22 667644444 667788888765
No 476
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=53.57 E-value=34 Score=27.10 Aligned_cols=52 Identities=17% Similarity=0.121 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEeee---c----C--CCCcCHHHHHHHHHHhC--CCCeEEeec
Q psy7930 81 KEIMALDCHQFVESGADGFVIGAL---T----G--EQEIDIEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~VfG~L---~----~--dg~iD~~~~~~Li~~a~--~~~vtFHRA 132 (146)
.+.+.+.++...+.|++++-+-.- . + .-.++.+.++++++.|+ ++++++|-.
T Consensus 171 ~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~ 233 (423)
T 3feq_A 171 VEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY 233 (423)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 455667788888899987655321 1 1 12689999999999996 899999964
No 477
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=52.82 E-value=15 Score=30.06 Aligned_cols=80 Identities=13% Similarity=0.086 Sum_probs=0.0
Q ss_pred CCCCCHHHHHHHHhhCCCcEEEEEccCCCCCcc-cCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCC-CcCHHHHHHHHH
Q psy7930 43 GLTPTLGLYRVIKRLVLVPVFVMIRVRAGFDFV-FSQAEKEIMALDCHQFVESGADGFVIGALTGEQ-EIDIEFIRQLKT 120 (146)
Q Consensus 43 GlTPS~g~i~~~~~~~~ipv~vMIRP~R~gdF~-Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg-~iD~~~~~~Li~ 120 (146)
||.|+...|+ ...+--+-.|+-| |. =..-+.+.+++-++.+.+.|++|+++.--|.++ .+..+--+++++
T Consensus 13 ~~~~~~~~m~---~~~~Gv~~a~vTP-----f~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~ 84 (315)
T 3na8_A 13 GLVPRGSHMS---ASIHGIIGYTITP-----FAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVD 84 (315)
T ss_dssp -------------CCCCEEEEECCCC-----BCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHH
T ss_pred CcCCCchhcc---cccCceEEEeeCc-----CCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH
Q ss_pred Hh-----CCCCeEEe
Q psy7930 121 II-----GDRPITFH 130 (146)
Q Consensus 121 ~a-----~~~~vtFH 130 (146)
.+ +..|+..|
T Consensus 85 ~~v~~~~grvpViaG 99 (315)
T 3na8_A 85 FTLKTVAHRVPTIVS 99 (315)
T ss_dssp HHHHHHTTSSCBEEE
T ss_pred HHHHHhCCCCcEEEe
No 478
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=52.47 E-value=10 Score=30.21 Aligned_cols=60 Identities=7% Similarity=-0.017 Sum_probs=36.2
Q ss_pred CCcEEEEEccCCCCCcccCHHHHHHH----HHHHHHHHHcCCCEEEEeeecCCCCc----CHHHHHHHHHHh
Q psy7930 59 LVPVFVMIRVRAGFDFVFSQAEKEIM----ALDCHQFVESGADGFVIGALTGEQEI----DIEFIRQLKTII 122 (146)
Q Consensus 59 ~ipv~vMIRP~R~gdF~Ys~~E~~~M----~~dI~~~~~~GadG~VfG~L~~dg~i----D~~~~~~Li~~a 122 (146)
++.++. -|. +-+ .-+.++++.| .+.++.+.+.|+|.||++|.+...-+ +....++|-+..
T Consensus 54 ~~~~~~-ar~-~~~--~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~ 121 (273)
T 2xed_A 54 EFSFHS-TRM-RMH--TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQL 121 (273)
T ss_dssp CEEEEE-EEE-CCC--BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHH
T ss_pred CeEEEE-eCC-ccC--CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHh
Confidence 334443 354 344 3456777776 44567778889999999998865433 333344444444
No 479
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=52.28 E-value=18 Score=26.92 Aligned_cols=48 Identities=19% Similarity=0.218 Sum_probs=0.0
Q ss_pred cccCHHHHHHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHH-HHHHHhCCCCeEE
Q psy7930 74 FVFSQAEKEIMALDCHQFVESGADGFVIGALTGEQEIDIEFIR-QLKTIIGDRPITF 129 (146)
Q Consensus 74 F~Ys~~E~~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~-~Li~~a~~~~vtF 129 (146)
+..++.+.+...+-++.+.+.++||+++-. .+.+.++ ++.+. ++|+++
T Consensus 43 ~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~------~~~~~~~~~l~~~--~iPvV~ 91 (277)
T 3e61_A 43 IGNSDNDIKKAQGYLATFVSHNCTGMISTA------FNENIIENTLTDH--HIPFVF 91 (277)
T ss_dssp EEECTTCHHHHHHHHHHHHHTTCSEEEECG------GGHHHHHHHHHHC---CCEEE
T ss_pred EEeCCCCHHHHHHHHHHHHhCCCCEEEEec------CChHHHHHHHHcC--CCCEEE
No 480
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=52.14 E-value=9.5 Score=31.37 Aligned_cols=21 Identities=19% Similarity=0.020 Sum_probs=18.6
Q ss_pred cCHHHHHHHHHcCCCEEEecC
Q psy7930 17 DSVASALAAVRGGADRLELCA 37 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~ 37 (146)
-+.++..+|.+.||++|||-.
T Consensus 133 pd~~qi~aA~~~GAd~IELhT 153 (260)
T 3o6c_A 133 PSLEDIEKSKILKAQFIELHT 153 (260)
T ss_dssp SCHHHHHHHHHTTCSEEEECC
T ss_pred CCHHHHHHHHHhCCCEEEEec
Confidence 467899999999999999974
No 481
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=51.74 E-value=27 Score=26.48 Aligned_cols=49 Identities=4% Similarity=-0.068 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEE-eeccc
Q psy7930 82 EIMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF-HRAFD 134 (146)
Q Consensus 82 ~~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtF-HRAFD 134 (146)
+...+.++.+.+.++||+++...+.+.. .+.++++.+ .+.|+++ .+..+
T Consensus 48 ~~~~~~i~~l~~~~vdgiii~~~~~~~~--~~~~~~~~~--~giPvV~~~~~~~ 97 (297)
T 3rot_A 48 PKQVQFIESALATYPSGIATTIPSDTAF--SKSLQRANK--LNIPVIAVDTRPK 97 (297)
T ss_dssp HHHHHHHHHHHHTCCSEEEECCCCSSTT--HHHHHHHHH--HTCCEEEESCCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCHHHH--HHHHHHHHH--CCCCEEEEcCCCc
Confidence 3445678888899999999976554421 334444443 3777554 44443
No 482
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=51.30 E-value=20 Score=28.96 Aligned_cols=75 Identities=20% Similarity=0.222 Sum_probs=51.1
Q ss_pred HHHHHHHHcCCCEEEecCCCC---CCCCCCCHHHHHHHHhhC---CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAALS---EGGLTPTLGLYRVIKRLV---LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVE 93 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~---~GGlTPS~g~i~~~~~~~---~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~ 93 (146)
.++..|.+.|||-|...-|+. .|-..--...++++++.+ +.|+-|+|-. .+. +++| ....=.+.+.+
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt----~~L-~d~e--~i~~a~~ia~e 161 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIET----GEL-KDEA--LIRKASEISIK 161 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCH----HHH-CSHH--HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEec----ccC-CcHH--HHHHHHHHHHH
Confidence 688899999999999988765 555554566777777755 4899999965 233 3333 12344556778
Q ss_pred cCCCEEEE
Q psy7930 94 SGADGFVI 101 (146)
Q Consensus 94 ~GadG~Vf 101 (146)
+|||-|=.
T Consensus 162 aGADfVKT 169 (260)
T 1p1x_A 162 AGADFIKT 169 (260)
T ss_dssp TTCSEEEC
T ss_pred hCCCEEEe
Confidence 88886543
No 483
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=51.29 E-value=48 Score=25.82 Aligned_cols=83 Identities=12% Similarity=-0.032 Sum_probs=51.0
Q ss_pred EEecCHHHHHHH---HHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh-CC-CcEEEEEccC-CCCCcccCHHHHHHHHHH
Q psy7930 14 VCVDSVASALAA---VRGGADRLELCAALSEGGLTPTLGLYRVIKRL-VL-VPVFVMIRVR-AGFDFVFSQAEKEIMALD 87 (146)
Q Consensus 14 vcv~s~~~a~~A---~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~-~~-ipv~vMIRP~-R~gdF~Ys~~E~~~M~~d 87 (146)
+.-.+.++++.. .+.|+|=|||.-.+-.. ++...+....+. .. +|+.+-+|++ -||.|..++++.-.+.+
T Consensus 10 i~~~t~~e~~~~~~~~~~~~D~vElRvD~l~~---~~~~~v~~~l~~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll~- 85 (231)
T 2ocz_A 10 VMPRHFDEAQAIDISKYEDVNLIEWRADFLPK---DEIVAVAPAIFEKFAGKEIIFTLRTVQEGGNITLSSQEYVDIIK- 85 (231)
T ss_dssp ECCSSHHHHHTCCGGGGTTCSEEEEEGGGSCG---GGHHHHHHHHHHHTTTSEEEEECCBGGGTCSBCCCHHHHHHHHH-
T ss_pred eCCCCHHHHHHHHHHhccCCCEEEEEeccccc---cCHHHHHHHHHHHcCCCcEEEEEeecccCCCCCCCHHHHHHHHH-
Confidence 334455554431 23389999999876542 334444433333 44 9999999962 36788888887766654
Q ss_pred HHHHHHcC-CCEEEEe
Q psy7930 88 CHQFVESG-ADGFVIG 102 (146)
Q Consensus 88 I~~~~~~G-adG~VfG 102 (146)
.+.++| +|-+-+=
T Consensus 86 --~~~~~g~~d~iDvE 99 (231)
T 2ocz_A 86 --EINAIYNPDYIDFE 99 (231)
T ss_dssp --HHHHHHCCSEEEEE
T ss_pred --HHHHcCCCCEEEEE
Confidence 445556 7755444
No 484
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=51.23 E-value=28 Score=25.96 Aligned_cols=43 Identities=19% Similarity=0.108 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeEE
Q psy7930 83 IMALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPITF 129 (146)
Q Consensus 83 ~M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vtF 129 (146)
...+.++.+.+.++||+++-..+.+ -..+.++++.+ .++|+++
T Consensus 52 ~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~~~~~~--~~iPvV~ 94 (293)
T 3l6u_A 52 SEREQILEFVHLKVDAIFITTLDDV--YIGSAIEEAKK--AGIPVFA 94 (293)
T ss_dssp HHHHHHHHHHHTTCSEEEEECSCTT--TTHHHHHHHHH--TTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEecCChH--HHHHHHHHHHH--cCCCEEE
Confidence 4456677788899999998654433 22344555544 4777654
No 485
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=51.09 E-value=11 Score=28.70 Aligned_cols=63 Identities=22% Similarity=0.248 Sum_probs=0.0
Q ss_pred CCCCC--CHHHHHHHHhhC-------CCcEEEEEccCCCCCccc-----CHHHHHHHHHHHHHHHHcCCCEEEEeeec
Q psy7930 42 GGLTP--TLGLYRVIKRLV-------LVPVFVMIRVRAGFDFVF-----SQAEKEIMALDCHQFVESGADGFVIGALT 105 (146)
Q Consensus 42 GGlTP--S~g~i~~~~~~~-------~ipv~vMIRP~R~gdF~Y-----s~~E~~~M~~dI~~~~~~GadG~VfG~L~ 105 (146)
||+.| +..+++.+.+.+ ..|..+.=.| .-.+..- .+.=...|.+.++.+.+.|+|.+|+.|-|
T Consensus 8 GGmg~~at~~~~~~i~~~~~~~~d~~~~~~~~~~~~-~i~~r~~~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnT 84 (228)
T 1jfl_A 8 GGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNP-QIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIMPCNT 84 (228)
T ss_dssp ECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECT-TSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEECSCTG
T ss_pred cccCHHHHHHHHHHHHHHHHhhcCCccCcEeEEeCC-CHHHHHHHHHcCCchHHHHHHHHHHHHHHcCCCEEEEcCcc
No 486
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=51.06 E-value=8.8 Score=30.79 Aligned_cols=53 Identities=17% Similarity=0.095 Sum_probs=39.1
Q ss_pred HHHHHHHHHHH-HcCCCEEEEeeecCCCCcCHHHHHHHHHHhC--CCCeEEeeccc
Q psy7930 82 EIMALDCHQFV-ESGADGFVIGALTGEQEIDIEFIRQLKTIIG--DRPITFHRAFD 134 (146)
Q Consensus 82 ~~M~~dI~~~~-~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~--~~~vtFHRAFD 134 (146)
+...++++.+. +.|+.||-+........+|-+.+..+.++|. ++++.+|-..+
T Consensus 110 ~~a~~el~r~~~~~G~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~g~pv~iH~g~~ 165 (312)
T 3ij6_A 110 ESACKVISSIKDDENLVGAQIFTRHLGKSIADKEFRPVLAQAAKLHVPLWMHPVFD 165 (312)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESEETTEETTSTTTHHHHHHHHHTTCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCceEeccCCCCCCCCCCccHHHHHHHHHHcCCeEEEcCCCC
Confidence 34456677775 5899999887544444677788888888875 89999997654
No 487
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=51.05 E-value=9 Score=31.80 Aligned_cols=21 Identities=33% Similarity=0.249 Sum_probs=18.6
Q ss_pred cCHHHHHHHHHcCCCEEEecC
Q psy7930 17 DSVASALAAVRGGADRLELCA 37 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~ 37 (146)
-+.+.+.+|.+.|||||||-.
T Consensus 164 pd~~qI~aA~~~GAd~IELhT 184 (278)
T 3gk0_A 164 PDEAQIRAAHETGAPVIELHT 184 (278)
T ss_dssp SCHHHHHHHHHHTCSEEEECC
T ss_pred CCHHHHHHHHHhCcCEEEEec
Confidence 467899999999999999975
No 488
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=50.56 E-value=29 Score=27.33 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=49.5
Q ss_pred eeEEEecCHHHHHHHHHcCCCEEEecC-CCCCCC---CCCCHHHHHHHHhhC-CCc--EEEEEccCCCCCcccCHHHHHH
Q psy7930 11 TLEVCVDSVASALAAVRGGADRLELCA-ALSEGG---LTPTLGLYRVIKRLV-LVP--VFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 11 ~lEvcv~s~~~a~~A~~~GAdRIELc~-~l~~GG---lTPS~g~i~~~~~~~-~ip--v~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
..=|||.+.++...+...+++=|=-.. ++---| .|++...++.+.+.. .+| +.++ .|+=+.++
T Consensus 119 ~~ivcVge~~e~~~~~~~~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~il-----yggsV~~~----- 188 (225)
T 1hg3_A 119 MTMVCSNNPAVSAAVAALNPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVL-----CGAGISTG----- 188 (225)
T ss_dssp EEEEEESSHHHHHHHHTTCCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEE-----EESSCCSH-----
T ss_pred EEEEEeCCHHHHHHHhcCCCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhccCCCEEE-----EeCCCCcH-----
Confidence 334799999998888888887555554 333335 578877666554432 111 1111 22334444
Q ss_pred HHHHHHHHHHcCCCEEEEe
Q psy7930 84 MALDCHQFVESGADGFVIG 102 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG 102 (146)
+|++.+++.|+|||-+|
T Consensus 189 --n~~~~~~~~~vDG~LVG 205 (225)
T 1hg3_A 189 --EDVKKAIELGTVGVLLA 205 (225)
T ss_dssp --HHHHHHHHTTCSEEEES
T ss_pred --HHHHHHHhCCCCEEEeC
Confidence 45667788999999998
No 489
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=50.55 E-value=29 Score=28.43 Aligned_cols=103 Identities=18% Similarity=0.293 Sum_probs=62.4
Q ss_pred cCHHHHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhh------CCCcEEEEEccCCCC--C--------cccC-HH
Q psy7930 17 DSVASALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRL------VLVPVFVMIRVRAGF--D--------FVFS-QA 79 (146)
Q Consensus 17 ~s~~~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~------~~ipv~vMIRP~R~g--d--------F~Ys-~~ 79 (146)
.+++.+..|.+.|-+-+=+ -|-.-|=-.=++..++. .+++|-.=|=- -|| | =.|| ++
T Consensus 85 ~~~e~i~~ai~~GFtSVMi-----DgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~-vgg~ed~~~~~~~~~~~T~Pe 158 (286)
T 1gvf_A 85 ESLDDIRRKVHAGVRSAMI-----DGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGR-LGGVEDDMSVDAESAFLTDPQ 158 (286)
T ss_dssp CCHHHHHHHHHTTCCEEEE-----CCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESC-CC-----------CCSSCCHH
T ss_pred CCHHHHHHHHHcCCCeEEE-----CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEee-ccCcccCcccccccccCCCHH
Confidence 4688888898888655533 23333433334444332 25666555543 333 1 1343 33
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEeeecCCC------CcCHHHHHHHHHHhCCCCeEEeec
Q psy7930 80 EKEIMALDCHQFVESGADGFVIGALTGEQ------EIDIEFIRQLKTIIGDRPITFHRA 132 (146)
Q Consensus 80 E~~~M~~dI~~~~~~GadG~VfG~L~~dg------~iD~~~~~~Li~~a~~~~vtFHRA 132 (146)
|.. +..++.|+|-+.+.+=|..| .||.++++++-+.. ++|++||=+
T Consensus 159 ea~------~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~-~vpLVlHGg 210 (286)
T 1gvf_A 159 EAK------RFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV-DVPLVLHGA 210 (286)
T ss_dssp HHH------HHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHC-CSCEEECCC
T ss_pred HHH------HHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhc-CCCEEEECC
Confidence 332 23346899988887667665 79999999987765 799999954
No 490
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=50.43 E-value=79 Score=25.77 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=53.4
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcCCC
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESGAD 97 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~Gad 97 (146)
+.+..+.+.|.+.+++.. |. .|. ...++.+++.++-.+.+|+.. ++| ||.+|...+ ++.+.++|+
T Consensus 151 ~~a~~~~~~Gf~~iKik~----g~-~~~~~~e~v~avr~a~g~d~~l~vDa-n~~---~~~~~a~~~---~~~l~~~~i- 217 (379)
T 2rdx_A 151 AELARHRAAGYRQFQIKV----GA-DWQSDIDRIRACLPLLEPGEKAMADA-NQG---WRVDNAIRL---ARATRDLDY- 217 (379)
T ss_dssp HHHHHHHHTTCCEEEEEC----CS-CHHHHHHHHHHHGGGSCTTCEEEEEC-TTC---SCHHHHHHH---HHHTTTSCC-
T ss_pred HHHHHHHHcCCCEEEEec----cC-CHHHHHHHHHHHHHhcCCCCEEEEEC-CCC---CCHHHHHHH---HHHHHhCCe-
Confidence 556777889999999963 32 232 456677777764335558888 655 465554333 334455565
Q ss_pred EEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 98 GFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 98 G~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
+ +.+--. |.+.+++|.+.. ++|+.
T Consensus 218 -~----iE~P~~-~~~~~~~l~~~~-~iPI~ 241 (379)
T 2rdx_A 218 -I----LEQPCR-SYEECQQVRRVA-DQPMK 241 (379)
T ss_dssp -E----EECCSS-SHHHHHHHHTTC-CSCEE
T ss_pred -E----EeCCcC-CHHHHHHHHhhC-CCCEE
Confidence 2 222223 888888886644 56654
No 491
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=50.36 E-value=13 Score=28.75 Aligned_cols=68 Identities=18% Similarity=0.086 Sum_probs=43.5
Q ss_pred CHHHHHHHHHcCCCEEEecCCC--CCCCCCCCHHHHHHHHhhCC--CcEEE--EEccCCCCCcccCHHHHHHHHHHHHHH
Q psy7930 18 SVASALAAVRGGADRLELCAAL--SEGGLTPTLGLYRVIKRLVL--VPVFV--MIRVRAGFDFVFSQAEKEIMALDCHQF 91 (146)
Q Consensus 18 s~~~a~~A~~~GAdRIELc~~l--~~GGlTPS~g~i~~~~~~~~--ipv~v--MIRP~R~gdF~Ys~~E~~~M~~dI~~~ 91 (146)
|.+.+....+.|.+-+-+.-+. ..+|...|...++.+++..+ +||.| =||| . +++.+
T Consensus 123 ~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI~~-~----------------~~~~~ 185 (221)
T 3exr_A 123 TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGLSV-D----------------TLKLF 185 (221)
T ss_dssp CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSCCG-G----------------GGGGG
T ss_pred CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCCCH-H----------------HHHHH
Confidence 4666666777788765553211 23577778777777777653 44332 2344 1 34567
Q ss_pred HHcCCCEEEEe
Q psy7930 92 VESGADGFVIG 102 (146)
Q Consensus 92 ~~~GadG~VfG 102 (146)
.++|||.+|+|
T Consensus 186 ~~aGad~~VvG 196 (221)
T 3exr_A 186 EGVDVFTFIAG 196 (221)
T ss_dssp TTCCCSEEEEC
T ss_pred HHCCCCEEEEC
Confidence 89999999999
No 492
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=50.22 E-value=1e+02 Score=25.02 Aligned_cols=97 Identities=14% Similarity=-0.026 Sum_probs=54.2
Q ss_pred HHHHHHHcCCCEEEecC-CCCCCCCCCCHHHHHHHHhh----CCCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHcC
Q psy7930 21 SALAAVRGGADRLELCA-ALSEGGLTPTLGLYRVIKRL----VLVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVESG 95 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~-~l~~GGlTPS~g~i~~~~~~----~~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~G 95 (146)
....+.++|...+=... +- ...+.+...++...+. ..+.+...... ... + .++++.+.+.|
T Consensus 82 ~~~~~~~~Gvtt~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~----~~~l~~l~~~g 147 (448)
T 3hm7_A 82 GSKSLAAGGVTTYFDMPLNS--NPPTITREELDKKRQLANEKSLVDYRFWGGL-VPG-------N----IDHLQDLHDGG 147 (448)
T ss_dssp HHHHHHTTTEEEEEECSSSS--SSCSCSHHHHHHHHTHHHHHCSSEEEEEEEC-CTT-------C----GGGHHHHHHTT
T ss_pred HHHHHHhCCEEEEEeCCCCC--CCCCChHHHHHHHHHHhccCCeeEEEEEEEe-ccc-------C----HHHHHHHHHcC
Confidence 45567788887765543 21 1111234444443332 22333333333 211 1 23344455689
Q ss_pred CCEEEEeeecCC----CCcCHHHHHHHHHHhC--CCCeEEee
Q psy7930 96 ADGFVIGALTGE----QEIDIEFIRQLKTIIG--DRPITFHR 131 (146)
Q Consensus 96 adG~VfG~L~~d----g~iD~~~~~~Li~~a~--~~~vtFHR 131 (146)
+.||-+|.--.. ..++.+.+.++++.|+ ++++.+|-
T Consensus 148 ~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~ 189 (448)
T 3hm7_A 148 VIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVHA 189 (448)
T ss_dssp CSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEEe
Confidence 999886642211 2568999999999887 89999993
No 493
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=50.16 E-value=43 Score=27.75 Aligned_cols=64 Identities=17% Similarity=0.084 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCCEEEecCCCCCCCCCCC--HHHHHHHHh-hCCCcEEEEEccCCCCCcccCHHHHHHH
Q psy7930 19 VASALAAVRGGADRLELCAALSEGGLTPT--LGLYRVIKR-LVLVPVFVMIRVRAGFDFVFSQAEKEIM 84 (146)
Q Consensus 19 ~~~a~~A~~~GAdRIELc~~l~~GGlTPS--~g~i~~~~~-~~~ipv~vMIRP~R~gdF~Ys~~E~~~M 84 (146)
++-+..|++.|||-+=+..-+...+.|+. +..++.+.+ .+++||.+-=.| |.| +.++.+.+..+
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P-~tg-~~l~~e~~~~L 174 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSP-YYG-FATRADLFFAL 174 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBG-GGT-BCCCHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecC-ccC-CCcCHHHHHHH
Confidence 45566788999999999876554433321 234455566 678999888889 877 77888877766
No 494
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=50.08 E-value=39 Score=28.23 Aligned_cols=103 Identities=15% Similarity=-0.038 Sum_probs=52.2
Q ss_pred HHHHHHcCCCEEEecCCC---------------CCCCCCCCH---HHHHHH---HhhCCCcEEEEEccCCCCCcccCHHH
Q psy7930 22 ALAAVRGGADRLELCAAL---------------SEGGLTPTL---GLYRVI---KRLVLVPVFVMIRVRAGFDFVFSQAE 80 (146)
Q Consensus 22 a~~A~~~GAdRIELc~~l---------------~~GGlTPS~---g~i~~~---~~~~~ipv~vMIRP~R~gdF~Ys~~E 80 (146)
+..+.+-|...+|+-.+. ..+|+|+.- ++++.+ .+..+|.+..++-.-|. + ++ +
T Consensus 84 ~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~R~--~--~~-~ 158 (367)
T 3iar_A 84 VEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCMRH--Q--PN-W 158 (367)
T ss_dssp HHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETT--C--GG-G
T ss_pred HHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeCCC--C--CH-H
Confidence 445667899999998653 135887731 122222 23346776555543132 2 11 1
Q ss_pred HHHHHHHHHHHHHcCCCEEE-EeeecCCCCcC---HHHHHHHHHHhC--CCCeEEeec
Q psy7930 81 KEIMALDCHQFVESGADGFV-IGALTGEQEID---IEFIRQLKTIIG--DRPITFHRA 132 (146)
Q Consensus 81 ~~~M~~dI~~~~~~GadG~V-fG~L~~dg~iD---~~~~~~Li~~a~--~~~vtFHRA 132 (146)
. .+-++.+++.--+||| ||.--++..-. .+...++.+.|+ |+++|+|=.
T Consensus 159 --a-~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~gl~~~~Hag 213 (367)
T 3iar_A 159 --S-PKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAG 213 (367)
T ss_dssp --H-HHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHHTCEEEEEES
T ss_pred --H-HHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHcCCeeEEecC
Confidence 1 1234444444223322 22222222222 245666666665 899999974
No 495
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=49.75 E-value=1.1e+02 Score=25.17 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCEEEecCC------C----CCCCCCC------CHHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHHHH
Q psy7930 20 ASALAAVRGGADRLELCAA------L----SEGGLTP------TLGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEKEI 83 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~------l----~~GGlTP------S~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~~~ 83 (146)
+.+..+.+.|.+.+++... . ..||+.| ....++.+++.++-.+.+||.. .++ ||.+|...
T Consensus 158 ~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDa-n~~---~~~~~a~~ 233 (407)
T 2o56_A 158 QAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEM-HAF---TDTTSAIQ 233 (407)
T ss_dssp HHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEEC-TTC---SCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEEC-CCC---CCHHHHHH
Confidence 4567778889999999631 1 1133222 2456777777765446678898 654 56655544
Q ss_pred HHHHHHHHHHcCCCEEEEeeecCCCCcCHHHHHHHHHHhCCCCeE
Q psy7930 84 MALDCHQFVESGADGFVIGALTGEQEIDIEFIRQLKTIIGDRPIT 128 (146)
Q Consensus 84 M~~dI~~~~~~GadG~VfG~L~~dg~iD~~~~~~Li~~a~~~~vt 128 (146)
+ ++.+.++|.+-+- .+-..-|.+.+++|.+.. ++|+.
T Consensus 234 ~---~~~l~~~~i~~iE----~P~~~~~~~~~~~l~~~~-~iPIa 270 (407)
T 2o56_A 234 F---GRMIEELGIFYYE----EPVMPLNPAQMKQVADKV-NIPLA 270 (407)
T ss_dssp H---HHHHGGGCCSCEE----CSSCSSSHHHHHHHHHHC-CSCEE
T ss_pred H---HHHHHhcCCCEEe----CCCChhhHHHHHHHHHhC-CCCEE
Confidence 4 4456677877432 111224788888887654 45554
No 496
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=49.75 E-value=59 Score=24.49 Aligned_cols=71 Identities=17% Similarity=0.236 Sum_probs=40.8
Q ss_pred HHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCC------CcccC-----HH-HHHHHHHHHHHHH
Q psy7930 25 AVRGGADRLELCAALSEGGLTPTLGLYRVIKRLVLVPVFVMIRVRAGF------DFVFS-----QA-EKEIMALDCHQFV 92 (146)
Q Consensus 25 A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~~ipv~vMIRP~R~g------dF~Ys-----~~-E~~~M~~dI~~~~ 92 (146)
|.+.|.+||=|.+. -++ -..++++...+..++.+. .| -.+ +..|+ +. -.+.+++-++.++
T Consensus 110 ~~~~~~~rigvlaT---~~T-~~~~~y~~~l~~~g~~v~---~~-~~~~~~~v~~~i~~~~~~g~~~~~~~l~~~~~~l~ 181 (226)
T 2zsk_A 110 ILKRGVRKVLLLGT---KTT-MTADFYIKTLEEKGLEVV---VP-NDEEKEELNRIIFEELAFGNLKNKEWIVRLIEKYR 181 (226)
T ss_dssp HHHTTCCEEEEESS---TTT-TSCHHHHHHHHTTTCEEE---CC-CHHHHHHHHHHHHHTGGGTCCTTHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEEeC---HHH-HhhhHHHHHHHHCCCEEE---cc-CHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 34458899988752 233 233566666665666643 44 221 01110 00 2345555666777
Q ss_pred H-cCCCEEEEee
Q psy7930 93 E-SGADGFVIGA 103 (146)
Q Consensus 93 ~-~GadG~VfG~ 103 (146)
+ .|+|.+|+||
T Consensus 182 ~~~g~d~iiLGC 193 (226)
T 2zsk_A 182 ESEGIEGVILGC 193 (226)
T ss_dssp HHSCCSEEEECS
T ss_pred hhcCCCEEEECC
Confidence 7 7999999997
No 497
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=49.64 E-value=18 Score=27.23 Aligned_cols=80 Identities=10% Similarity=-0.042 Sum_probs=43.2
Q ss_pred HHHHHHHH-cCCCEEEecCCCCCCCCCCC-HHHHHHHHhhCCCcEEEEEccCCCCCcccCHHHH-----HHHHHHHHHHH
Q psy7930 20 ASALAAVR-GGADRLELCAALSEGGLTPT-LGLYRVIKRLVLVPVFVMIRVRAGFDFVFSQAEK-----EIMALDCHQFV 92 (146)
Q Consensus 20 ~~a~~A~~-~GAdRIELc~~l~~GGlTPS-~g~i~~~~~~~~ipv~vMIRP~R~gdF~Ys~~E~-----~~M~~dI~~~~ 92 (146)
+.+..|.+ .|++||=|.+- .|.+ .+.++...+..++.+.. | +.-+.. +..|+ +.+.+-++.+.
T Consensus 97 ~a~~~a~~~~g~~rvgvlt~-----~~~~~~~~~~~~l~~~G~~v~~---~-~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 166 (223)
T 2dgd_A 97 ESVYELLKKLNVRKLWIGTP-----YIKERTLEEVEWWRNKGFEIVG---Y-DGLGKI-RGIDISNTPIFTIYRLVKRHL 166 (223)
T ss_dssp HHHHHHHHHTTCCEEEEEES-----SCHHHHHHHHHHHHTTTCEEEE---E-EECCCC-SHHHHHTCCHHHHHHHHHTTH
T ss_pred HHHHHHHHHcCCCeEEEEeC-----CchHHHHHHHHHHHhCCcEEec---c-cCCCCC-CcchhhccCHHHHHHHHHHHh
Confidence 44444444 68899988742 2233 33555555556776533 3 222221 11111 33555555666
Q ss_pred Hc--CCCEEEEeeecCCCCc
Q psy7930 93 ES--GADGFVIGALTGEQEI 110 (146)
Q Consensus 93 ~~--GadG~VfG~L~~dg~i 110 (146)
+. |+|++|+|| |.=..+
T Consensus 167 ~~~~gadaIvLgC-T~l~~~ 185 (223)
T 2dgd_A 167 NEVLKADAVYIAC-TALSTY 185 (223)
T ss_dssp HHHTTSSEEEECC-TTSCCT
T ss_pred cccCCCCEEEEeC-CcccHH
Confidence 66 999999997 443333
No 498
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=49.51 E-value=76 Score=24.46 Aligned_cols=84 Identities=21% Similarity=0.215 Sum_probs=45.7
Q ss_pred HHHHHHHcCCCEEEecCCCCCCCCCCCHHHHHHHHhhC---CCcEEEEEc---cCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 21 SALAAVRGGADRLELCAALSEGGLTPTLGLYRVIKRLV---LVPVFVMIR---VRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 21 ~a~~A~~~GAdRIELc~~l~~GGlTPS~g~i~~~~~~~---~ipv~vMIR---P~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
.+..+.+.|||-+-+-. .+| ...++.+++.. +.-|.++-. | -..++. . +.-.+=.+..++.
T Consensus 83 ~~~~~~~~gad~vtvh~---~~G----~~~l~~~~~~~~~~g~~v~vLt~~s~~-~~~~~~---~--~~~~~~a~~a~~~ 149 (228)
T 3m47_A 83 ICRATFKAGADAIIVHG---FPG----ADSVRACLNVAEEMGREVFLLTEMSHP-GAEMFI---Q--GAADEIARMGVDL 149 (228)
T ss_dssp HHHHHHHTTCSEEEEES---TTC----HHHHHHHHHHHHHHTCEEEEECCCCSG-GGGTTH---H--HHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEec---cCC----HHHHHHHHHHHHhcCCCeEEEEeCCCc-cHHHHH---H--HHHHHHHHHHHHh
Confidence 45567789999988864 344 34444444332 333444222 3 112221 1 1222334567889
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhC
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIG 123 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~ 123 (146)
|.+|||.|+ + ..+.++++.+..+
T Consensus 150 G~~GvV~~a-t-----~~~e~~~ir~~~~ 172 (228)
T 3m47_A 150 GVKNYVGPS-T-----RPERLSRLREIIG 172 (228)
T ss_dssp TCCEEECCS-S-----CHHHHHHHHHHHC
T ss_pred CCcEEEECC-C-----ChHHHHHHHHhcC
Confidence 999999987 2 2234555555554
No 499
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=48.92 E-value=1.1e+02 Score=25.13 Aligned_cols=89 Identities=20% Similarity=0.228 Sum_probs=57.0
Q ss_pred HHHHHHHHcCCCEEEecCCCCCCCCCCC----HHHHHHHHhhC-CCcEEEEEccCCCCCcccCHHHHHHHHHHHHHHHHc
Q psy7930 20 ASALAAVRGGADRLELCAALSEGGLTPT----LGLYRVIKRLV-LVPVFVMIRVRAGFDFVFSQAEKEIMALDCHQFVES 94 (146)
Q Consensus 20 ~~a~~A~~~GAdRIELc~~l~~GGlTPS----~g~i~~~~~~~-~ipv~vMIRP~R~gdF~Ys~~E~~~M~~dI~~~~~~ 94 (146)
+++..+.+.|||-|-+ |-|||. ...++++.+.. .+|+. .-+ .=|-+.+. .+-++.+.++
T Consensus 115 ~dI~~~~~~GAdGvVf------G~L~~dg~iD~~~~~~Li~~a~~l~vT--FHR--AFD~~~d~------~~Ale~Li~l 178 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVF------GALTEDGHIDKELCMSLMAICRPLPVT--FHR--AFDMVHDP------MAALETLLTL 178 (287)
T ss_dssp HHHHHHHHTTCSEEEE------CCBCTTSCBCHHHHHHHHHHHTTSCEE--ECG--GGGGCSCH------HHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEE------eeeCCCCCcCHHHHHHHHHHcCCCcEE--EEC--chhccCCH------HHHHHHHHHc
Confidence 5888899999988865 556664 55555555544 34442 222 32333332 3446777778
Q ss_pred CCCEEEEeeecCCCCcCHHHHHHHHHHhCC
Q psy7930 95 GADGFVIGALTGEQEIDIEFIRQLKTIIGD 124 (146)
Q Consensus 95 GadG~VfG~L~~dg~iD~~~~~~Li~~a~~ 124 (146)
|.+.|-.+=..++-.-..+.+++|++.+++
T Consensus 179 GvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 179 GFERVLTSGCDSSALEGLPLIKRLIEQAKG 208 (287)
T ss_dssp TCSEEEECTTSSSTTTTHHHHHHHHHHHTT
T ss_pred CCCEEECCCCCCChHHhHHHHHHHHHHhCC
Confidence 999887655444445678889999988763
No 500
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=48.36 E-value=19 Score=29.42 Aligned_cols=53 Identities=11% Similarity=0.235 Sum_probs=37.7
Q ss_pred HHHHHHHHcCCCEEEEeee-c-CCCCcCHHHHHHHHHHhC--CCC--eEEeecccCCCCc
Q psy7930 86 LDCHQFVESGADGFVIGAL-T-GEQEIDIEFIRQLKTIIG--DRP--ITFHRAFDVVREP 139 (146)
Q Consensus 86 ~dI~~~~~~GadG~VfG~L-~-~dg~iD~~~~~~Li~~a~--~~~--vtFHRAFD~~~d~ 139 (146)
++++.++++|++-+=+.+= + ..|..|.+...++++.|+ ||. ++||-. |.-.||
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hys-d~wadP 89 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLS-DTWADP 89 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCS-SSCCBT
T ss_pred hHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccC-CCCCCc
Confidence 5788888999988887642 2 357788999888888775 554 677763 544555
Done!