Psyllid ID: psy7935

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Protein Sequence
MSHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccEEEEEEEEcccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccEEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccEEEEEccccccccccccccHHHHHHHHHHcccccccccccHHHHcccccccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccEccccccccccccccccHHHHHcccEEEEEEEccccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEcccccEEEEEcccccccccHHHHccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mshiskkfkiteasdmvlqpaecfkqgaegrifkteylgRSVLVKERfskkyrhpkldealtkERITSEIRGLMKCRMADICLDDVQKSAIQTLISNldsqnitrENISDIIKLLSIEIGTtlsvmhsnniihgdlttsnmilssdHHLVMIDFGLsqikvstedkAVDLYVLKRNLTTIIVVAYCWSkgtlqsynHHLVMIDFGLsqikvstedkavdFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRgrkrcmvg
Flexible Loop (DISEMBL)
mshiskkfkiteasdmvlqPAECFKqgaegrifkteylgrsvlvkerfskkyrhpkldealtkeritSEIRGLMKCRMADICLDDVQKSAIQTLisnldsqnitrENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSsyrrqnrkqfETVMKTFaevelrgrkrcmvg
Low Complexity Region (SEG)
MSHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG
Disordered region (IsUnstruct)
***************MVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE**********
Disordered Region (DISOPRED)
******K*K*TEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG
Disordered Region (DISEMBL)
MSHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG
Disordered Region (DISPRO)
****SKKFKITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELR********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	260	2.2.26 [Sep-21-2011]
Q99PW4	244	TP53-regulating kinase OS	yes	N/A	0.807	0.860	0.354	3e-30
Q96S44	253	TP53-regulating kinase OS	yes	N/A	0.792	0.814	0.345	8e-30
Q9P7N1	238	Serine/threonine-protein	yes	N/A	0.761	0.831	0.36	7e-27
Q54W07	252	Probable serine/threonine	yes	N/A	0.742	0.765	0.341	2e-26
Q4HYC1	262	Serine/threonine-protein	yes	N/A	0.780	0.774	0.330	4e-26
Q2HGY8	267	Serine/threonine-protein	N/A	N/A	0.784	0.764	0.279	2e-22
Q1EBD3	287	Serine/threonine-protein	N/A	N/A	0.780	0.707	0.287	5e-22
Q6BHA8	260	Serine/threonine-protein	yes	N/A	0.807	0.807	0.301	8e-22
Q6CXB9	263	Serine/threonine-protein	yes	N/A	0.784	0.775	0.286	2e-21
Q4WYU4	277	Serine/threonine-protein	yes	N/A	0.769	0.722	0.282	2e-20

>sp|Q99PW4|PRPK_MOUSE TP53-regulating kinase OS=Mus musculus GN=Tp53rk PE=2 SV=1

 Score =  132 bits (331), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 124/262 (47%), Gaps = 52/262 (19%)

Query: 14  SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGL 73
           S + L   E  +QGAE R+F+  + GR+ +VK RF K YRHP+L+  L + R   E R L
Sbjct: 20  SRLFLSGLELVQQGAEARVFRGRFQGRAAVVKHRFPKSYRHPELEARLGRRRTVQEARAL 79

Query: 74  MKCRMADICLDDV----------QKSAIQTLISNLDSQNITRENISDIIKLLSI--EIGT 121
           ++CR A I    V              I+  ++  D    T E   D   LL +   +G 
Sbjct: 80  LRCRRAGIAAPVVFFVDYASNCLYMEEIEDSVTVRDYIQSTMETEKDPQCLLDLARRMGQ 139

Query: 122 TLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLT 178
            L+ MH  ++IHGDLTTSNM+L    +  H+V+IDFGLS +    EDK VDLYVL+    
Sbjct: 140 VLAGMHDQDLIHGDLTTSNMLLRRPLAQLHIVLIDFGLSFVSGLPEDKGVDLYVLE---- 195

Query: 179 TIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQ 238
                     K  L ++ H               TE         F   L SY   ++K 
Sbjct: 196 ----------KAFLSTHPH---------------TETA-------FEAFLKSYGASSKKS 223

Query: 239 FETVMKTFAEVELRGRKRCMVG 260
              V+K   EV LRGRKR MVG
Sbjct: 224 -SPVLKKLDEVRLRGRKRSMVG 244

Protein kinase that phosphorylates 'Ser-15' of p53/TP53 protein and may therefore participate in its activation.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q96S44|PRPK_HUMAN TP53-regulating kinase OS=Homo sapiens GN=TP53RK PE=1 SV=2

 Score =  130 bits (328), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 128/266 (48%), Gaps = 60/266 (22%)

Query: 14  SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGL 73
           S   L   E  KQGAE R+F+  + GR+ ++K RF K YRHP L+  L + R   E R L
Sbjct: 29  SSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEARAL 88

Query: 74  MKCRMADI-------------CL--DDVQKS-AIQTLISNLDSQNITRENISDIIKLLSI 117
           ++CR A I             CL  ++++ S  ++  I +      T + +S++ K    
Sbjct: 89  LRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAK---- 144

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVSTEDKAVDLYVLK 174
            IG  L+ MH  ++IHGDLTTSNM+L       ++V+IDFGLS I    EDK VDLYVL+
Sbjct: 145 TIGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYVLE 204

Query: 175 RNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQ 234
                         K  L ++ +               TE        +F   L SY   
Sbjct: 205 --------------KAFLSTHPN---------------TE-------TVFEAFLKSYSTS 228

Query: 235 NRKQFETVMKTFAEVELRGRKRCMVG 260
           ++K    V+K   EV LRGRKR MVG
Sbjct: 229 SKKA-RPVLKKLDEVRLRGRKRSMVG 253

Protein kinase that phosphorylates 'Ser-15' of p53/TP53 protein and may therefore participate in its activation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9P7N1|BUD32_SCHPO Serine/threonine-protein kinase bud32 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bud32 PE=3 SV=1

 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 130/250 (52%), Gaps = 52/250 (20%)

Query: 25  KQGAEGRIFKTE-YLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI-C 82
           KQGAE    KTE Y G   L+K R +K++RHP LD+ L+++R   E R L KC    I C
Sbjct: 27  KQGAEAITIKTEFYPGEVCLLKCRPAKRWRHPILDQKLSRKRCLVEARLLAKCHYVGIKC 86

Query: 83  --LDDVQKSAIQTLISNLDSQNITRENISDII------KLLSI--EIGTTLSVMHSNNII 132
             L  +  +  Q  +  +D   + R+ I +I       KL+ +   IG+ ++ MH N+I+
Sbjct: 87  PMLYFIDANRGQIYMEWIDGPCV-RDYIREICECEIEKKLIPLMKRIGSEVAKMHKNDIV 145

Query: 133 HGDLTTSNMILSSDHHLV--MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG 190
           HGDLTTSNM+L S ++ V   IDFGL  +  S EDKAVD+YVL+R L++ +  +      
Sbjct: 146 HGDLTTSNMMLESHNNPVPIFIDFGLGSVSESEEDKAVDIYVLERALSSTLPES------ 199

Query: 191 TLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE 250
             +S  HH                            +L SY  Q+ KQ +  ++ F EV 
Sbjct: 200 --ESLFHH----------------------------VLDSY-AQSWKQSKATLRRFEEVR 228

Query: 251 LRGRKRCMVG 260
           +RGRKR M+G
Sbjct: 229 MRGRKRTMIG 238

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54W07|BUD32_DICDI Probable serine/threonine-protein kinase BUD32 homolog OS=Dictyostelium discoideum GN=bud32 PE=3 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 122/252 (48%), Gaps = 59/252 (23%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-----MAD 80
           QGAE + ++T+  G   +VKERFSK YRHP LD+ ++ +RI  E+R L KC+     +  
Sbjct: 43  QGAEAKTYETDLYGLKCIVKERFSKAYRHPILDQKISSKRILQEVRSLNKCKKKGIQVPS 102

Query: 81  ICLDDVQKSAI-----------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN 129
           + L D+  + I             L  N +S    +  I  I+K    E+G  + ++H  
Sbjct: 103 LYLVDIGNNRIYMEFIKGETVKHYLYKNQESTQ-HQNQIESIMK----ELGNQIGIIHEM 157

Query: 130 NIIHGDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWS 188
           N+IHGDLTTSNM+L  S + LV IDFGLS    S EDKAVDLYVL+R             
Sbjct: 158 NVIHGDLTTSNMLLRESTNELVFIDFGLSYTSNSVEDKAVDLYVLERAF----------- 206

Query: 189 KGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAE 248
                                 +ST   +     +F  ILS+Y   +    + V++   +
Sbjct: 207 ----------------------ISTHPNS---EQLFQTILSNYELTSSNS-KIVIQKLNQ 240

Query: 249 VELRGRKRCMVG 260
           V LRGRK+   G
Sbjct: 241 VRLRGRKKTCFG 252

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation.

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q4HYC1|BUD32_GIBZE Serine/threonine-protein kinase BUD32 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BUD32 PE=3 SV=1

 Score =  118 bits (296), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 124/269 (46%), Gaps = 66/269 (24%)

Query: 20  PAECFKQGAEGRIFKTEYLGRSV--LVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           P     QGAEGR++KT YL   +   +K R  K +RHP LD+ LTK RI SE R L KCR
Sbjct: 32  PPILITQGAEGRLYKTTYLLPDIPCALKYRPPKPWRHPILDQRLTKHRILSEARILAKCR 91

Query: 78  MADI---CLDDVQKSAIQTLISNLDSQNITR-------------ENISDIIKLLSIEIGT 121
              +    +  V +SA   ++  +    + +             EN +++  L+   IGT
Sbjct: 92  RDGVRVPAVYAVDESAGWLMLEWVSGGPVRKSINERLGNRTEGIENDAELKDLMR-RIGT 150

Query: 122 TLSVMHSNNIIHGDLTTSNMILSS----------DHHLVMIDFGLSQIKVSTEDKAVDLY 171
            +  MH   I+HGDLTTSNM+L               LV+ID GLS   +S ED+AVDLY
Sbjct: 151 AIGNMHKVGIVHGDLTTSNMMLEPLANPQDDNPLHGELVIIDLGLSSGSISDEDRAVDLY 210

Query: 172 VLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY 231
           VL+R   +    A C                                    +F+ +L +Y
Sbjct: 211 VLERAFGSTHPRAEC------------------------------------VFSEVLDAY 234

Query: 232 RRQNRKQFETVMKTFAEVELRGRKRCMVG 260
             Q  KQ + V+K   +V +RGRKR M+G
Sbjct: 235 -GQTFKQAKVVLKKLEDVRMRGRKRSMLG 262

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2HGY8|BUD32_CHAGB Serine/threonine-protein kinase BUD32 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BUD32 PE=3 SV=1

 Score =  106 bits (264), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 120/283 (42%), Gaps = 79/283 (27%)

Query: 20  PAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           P     QGAEGR++KT +L   R   +K R  K YRHP LD  LTK R++SE + L +C 
Sbjct: 22  PPTLITQGAEGRLYKTTHLTRDRPCALKYRPPKPYRHPVLDARLTKARLSSEAKVLERCW 81

Query: 78  MADICLDDVQ-------------------KSAIQTLISNLDSQNITRENISDIIKLLSI- 117
              + +  V                    +  I   + +   +      ++D   ++ + 
Sbjct: 82  REGVPVPAVYAMDPAAGWMMMEWIEGIPVRVGINEWLGDRPEEGAEIPQVADETPIVDLM 141

Query: 118 -EIGTTLSVMHSNNIIHGDLTTSNMIL-------------------SSDHHLVMIDFGLS 157
             IG  +  +H   ++HGDLTTSNM+L                   S +  +V+IDFGL+
Sbjct: 142 KRIGAAIGALHKTGVVHGDLTTSNMMLRPRGFNPVDGAPGDEGKAGSVEGDVVLIDFGLA 201

Query: 158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKA 217
              +S ED+AVDLYVL+R                                    ST  +A
Sbjct: 202 TQSMSDEDRAVDLYVLERAF---------------------------------ASTHPRA 228

Query: 218 VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG 260
                +F  +L SY+   +K    ++K   +V +RGRKR M+G
Sbjct: 229 ---ERLFATLLESYKSTFKKASSVLIK-LEDVRMRGRKRSMLG 267

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) (taxid: 306901)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1EBD3|BUD32_COCIM Serine/threonine-protein kinase BUD32 OS=Coccidioides immitis (strain RS) GN=BUD32 PE=3 SV=1

 Score =  104 bits (260), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 128/306 (41%), Gaps = 103/306 (33%)

Query: 20  PAECFKQGAEGRIFKTEYLGRS--VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           P     QGAE R++KT++L  S    +K R SK YRHP LD  LT++R+  E R L+K  
Sbjct: 20  PPVLLAQGAEARLYKTDFLNPSFPAALKFRPSKPYRHPILDRRLTRQRVLQEARCLVKLL 79

Query: 78  MADICLDDV--------------------------QKSAIQTLISNLD------------ 99
              I +  V                          +  A++ ++++ +            
Sbjct: 80  KEGIPVPGVLSVDWNTGQGEDETGNGGAWLLMEWIEGPAVRQVVNHWEKWMKHCESATKG 139

Query: 100 -----SQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--------- 145
                ++N  R    DI  LL   IG  +  +H   +IHGDLTTSN+IL           
Sbjct: 140 NNSGMNENFERSAEEDIRSLLR-RIGRVIGALHKAGVIHGDLTTSNLILRGQSNENTTNI 198

Query: 146 DHH-----------LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQS 194
           D H           +V+IDFGL+   V  ED+AVDLYVL+R                   
Sbjct: 199 DPHSTTLKPNLEGEIVLIDFGLASQSVQDEDRAVDLYVLER------------------- 239

Query: 195 YNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR 254
                    FG S  +             F+ +L +Y R++ K   +V++T  +V +RGR
Sbjct: 240 --------AFGSSHPRTEI---------FFDEVLKAY-RESFKGASSVLETLKKVRMRGR 281

Query: 255 KRCMVG 260
           KR MVG
Sbjct: 282 KRSMVG 287

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Coccidioides immitis (strain RS) (taxid: 246410)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6BHA8|BUD32_DEBHA Serine/threonine-protein kinase BUD32 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=BUD32 PE=3 SV=2

 Score =  104 bits (259), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 129/275 (46%), Gaps = 65/275 (23%)

Query: 20  PAECFKQGAEGRIFKTE--------YL---GRSVLVKERFSKKYRHPKLDEALTKERITS 68
           P     QGAE  +F T+        YL   G+ V +K R SK YRHPK+D ++TK R   
Sbjct: 17  PLTVISQGAEALVFYTDVHPYANEPYLQNRGKYV-IKYRPSKPYRHPKVDSSITKSRTVG 75

Query: 69  EIRGLMKCRMADI----------------------CLDDVQKSAIQTLISNLDSQNITRE 106
           E++ + K    +I                       L +   S+ +  +  L+  N  ++
Sbjct: 76  EVKFMYKLNKLNINSPRIISADYNNGIIWMEYIGYSLPNGDVSSFKNWLWYLERNN--QD 133

Query: 107 NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
             S+ ++ +  ++G  +  +H + +IHGDLT+SN++L+ D   V+IDFGLS      ED+
Sbjct: 134 CTSESVEKMCFKVGQLIGKLHLHEMIHGDLTSSNILLNDDEP-VLIDFGLSSYSGLAEDR 192

Query: 167 AVDLYVLKRNLT-TIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFN 225
           AVDLYVL+R +T T  V A  +++  LQ Y       +FG                    
Sbjct: 193 AVDLYVLERAITSTHSVYAKEYNQWLLQGYEDVHKHKEFG-------------------- 232

Query: 226 WILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG 260
                  +Q +K+   V+K   +V LRGRKR M+G
Sbjct: 233 -------KQGQKKLVEVLKKLDDVRLRGRKRSMLG 260

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6CXB9|BUD32_KLULA Serine/threonine-protein kinase BUD32 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=BUD32 PE=3 SV=1

 Score =  102 bits (254), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 123/283 (43%), Gaps = 79/283 (27%)

Query: 20  PAECFKQGAEGRIFKTE---YLGRS--------VLVKERFSKKYRHPKLDEALTKERITS 68
           P     QGAE  +F +    YL ++         ++K R  KKYRHP +D+ LTK R   
Sbjct: 18  PLTPISQGAEAVVFTSPVHPYLPKNRTDGDDKLYILKYRPEKKYRHPVIDKTLTKHRTLG 77

Query: 69  EIRGLMKCRMADI--------------CL------DDVQKSAIQTLISNLDSQNITRENI 108
           E R L K R+ D               C+      +D+      + + N    N + +  
Sbjct: 78  ESRLLAKLRLIDGLNVPKLIGCDPYHGCIWLEFLGEDLPNGHGFSNLKNFLWMNAS-DPY 136

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGLSQIKVSTED 165
           SD+++   I +G  + +MH N+  HGDLTTSN++L     D    +IDFGL  I    ED
Sbjct: 137 SDLVRDTMINVGKQIGLMHWNDYCHGDLTTSNIVLVRAGEDWQPYLIDFGLGSISTLVED 196

Query: 166 KAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFN 225
           K VDLYVL+R +                                 +ST      F + +N
Sbjct: 197 KGVDLYVLERAI---------------------------------ISTHSS---FANRYN 220

Query: 226 -WILSSYR-------RQNRKQFETVMKTFAEVELRGRKRCMVG 260
            W+L  ++       +    +++ +++ F EV LRGRKR M+G
Sbjct: 221 LWVLEGFKSVFESHGKAGLGKYKDLIRRFEEVRLRGRKRSMIG 263

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q4WYU4|BUD32_ASPFU Serine/threonine-protein kinase bud32 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bud32 PE=3 SV=1

 Score = 99.4 bits (246), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 97/297 (32%)

Query: 20  PAECFKQGAEGRIFKTEYLGRSV--LVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           P +   QGAE  ++KT +L  S    +K R SK YRHP LD  LT++RI  E R L+K  
Sbjct: 22  PPQLLTQGAEAHLYKTVFLSPSAPAALKVRPSKPYRHPILDRRLTRQRILQEARCLVKLV 81

Query: 78  ------MADICLDDVQKSA-------------IQTLI----------------SNLDSQN 102
                  A + LD   +S              I+ ++                + L ++ 
Sbjct: 82  REGVNVPAVLALDWEGQSGEKGFGGAWLMMEWIEGMVVRVVLERWEKYMKRNQAGLGAEE 141

Query: 103 ITREN--ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL----------------- 143
             +E   + D++K     IG  +  +H   +IHGDLTTSN+IL                 
Sbjct: 142 FEKEEARVRDLMK----RIGHAVGALHKAGVIHGDLTTSNLILRPPTRAEQQPAADETNP 197

Query: 144 SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMID 203
           S +  +V+IDFGL+   +  ED+AVDLYVL+R                            
Sbjct: 198 SMEGDVVLIDFGLASQSLQDEDRAVDLYVLERA--------------------------- 230

Query: 204 FGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG 260
           FG +  +            +F  +LS Y +++ K   + +K   EV +RGRKR M+G
Sbjct: 231 FGSTHPRTEP---------LFTEVLSGY-KESYKGASSALKRLEEVRMRGRKRSMIG 277

Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
270004028	225	hypothetical protein TcasGA2_TC003335 [T	0.796	0.92	0.386	2e-40
198434867	229	PREDICTED: similar to TP53-regulating ki	0.757	0.860	0.378	6e-36
198434869	238	PREDICTED: similar to TP53-regulating ki	0.757	0.827	0.378	6e-36
405972077	222	TP53-regulating kinase [Crassostrea giga	0.776	0.909	0.372	3e-35
195127365	224	GI11986 [Drosophila mojavensis] gi|19391	0.776	0.901	0.352	8e-35
443712649	230	hypothetical protein CAPTEDRAFT_206116 [	0.784	0.886	0.375	9e-35
332026633	235	TP53-regulating kinase [Acromyrmex echin	0.796	0.880	0.354	5e-34
194750291	224	GF10474 [Drosophila ananassae] gi|190624	0.780	0.906	0.365	6e-34
189235102	183	PREDICTED: similar to CG10673 CG10673-PA	0.615	0.874	0.455	1e-33
324511773	240	TP53-regulating kinase [Ascaris suum]	0.792	0.858	0.332	2e-33

>gi|270004028|gb|EFA00476.1| hypothetical protein TcasGA2_TC003335 [Tribolium castaneum]

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 143/261 (54%), Gaps = 54/261 (20%)

Query: 18  LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           ++  E F+QGAEGRIFK  YLG+  + KERF KKYRHP LD  LTKERI SE R +++C+
Sbjct: 1   MEGFELFRQGAEGRIFKGVYLGKPAIAKERFVKKYRHPDLDSHLTKERIKSESRSIIRCK 60

Query: 78  MADI-----CLDDVQKSAI--QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN 130
            A I      L D  +  I  +   +++  ++   +  +++I  L+++IG  L  MH+N+
Sbjct: 61  SAGIRTPALYLVDFNRRTIFMEYFENSIVVKDFIAQASNEVISKLALKIGAVLGKMHANS 120

Query: 131 IIHGDLTTSNMILSS-----------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTT 179
           IIHGDLTTSNM+L +           D  L+ IDFGLS ++ S EDK VDLYVL+R L  
Sbjct: 121 IIHGDLTTSNMLLVNKNGQKSYSNLQDLELIFIDFGLSHVESSAEDKGVDLYVLERAL-- 178

Query: 180 IIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQF 239
                                          +ST   A    ++F+ +L  Y+ +N+  F
Sbjct: 179 -------------------------------ISTHSTA---SEIFDQVLEGYKLENKSGF 204

Query: 240 ETVMKTFAEVELRGRKRCMVG 260
           + V+  F EV+ RGRKR MVG
Sbjct: 205 KEVLAKFKEVQARGRKRTMVG 225

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198434867|ref|XP_002125930.1| PREDICTED: similar to TP53-regulating kinase (p53-related protein kinase) (Nori-2) isoform 1 [Ciona intestinalis]

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 135/259 (52%), Gaps = 62/259 (23%)

Query: 22  ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
           E  KQGAE +++K E+LGR+ +VKERF KKYR P++DE LTK+R+T E+R L +CR A I
Sbjct: 13  ELIKQGAEAKVYKGEFLGRNCIVKERFPKKYRLPEIDEKLTKKRLTQEVRALQRCRKAGI 72

Query: 82  C---------------LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVM 126
                           ++++    ++  ISN   + ++ E +  + K     IG  L+ M
Sbjct: 73  ATPAIYFTDLVGSVIFMEEIPGCTMKDFISNNSQKKLSDEVVCGVEK-----IGEILAKM 127

Query: 127 HSNNIIHGDLTTSNMILSSDHH-----LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTII 181
           H+ +IIHGDLTTSNMIL + +      + MIDFGLSQ     EDK VDLYVL+R      
Sbjct: 128 HNADIIHGDLTTSNMILKTSNQNDGPIIYMIDFGLSQSSSLAEDKGVDLYVLERAF---- 183

Query: 182 VVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFET 241
                     L S+                       D  D+F  +L SY+  + K  E 
Sbjct: 184 ----------LSSHP----------------------DSEDLFEKLLQSYKSFS-KNCEP 210

Query: 242 VMKTFAEVELRGRKRCMVG 260
           V K F EV +RGRKR M+G
Sbjct: 211 VFKKFEEVRMRGRKRTMIG 229

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|198434869|ref|XP_002126109.1| PREDICTED: similar to TP53-regulating kinase (p53-related protein kinase) (Nori-2) isoform 2 [Ciona intestinalis]

 Score =  157 bits (396), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 135/259 (52%), Gaps = 62/259 (23%)

Query: 22  ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
           E  KQGAE +++K E+LGR+ +VKERF KKYR P++DE LTK+R+T E+R L +CR A I
Sbjct: 22  ELIKQGAEAKVYKGEFLGRNCIVKERFPKKYRLPEIDEKLTKKRLTQEVRALQRCRKAGI 81

Query: 82  C---------------LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVM 126
                           ++++    ++  ISN   + ++ E +  + K     IG  L+ M
Sbjct: 82  ATPAIYFTDLVGSVIFMEEIPGCTMKDFISNNSQKKLSDEVVCGVEK-----IGEILAKM 136

Query: 127 HSNNIIHGDLTTSNMILSSDHH-----LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTII 181
           H+ +IIHGDLTTSNMIL + +      + MIDFGLSQ     EDK VDLYVL+R      
Sbjct: 137 HNADIIHGDLTTSNMILKTSNQNDGPIIYMIDFGLSQSSSLAEDKGVDLYVLERAF---- 192

Query: 182 VVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFET 241
                     L S+                       D  D+F  +L SY+  + K  E 
Sbjct: 193 ----------LSSHP----------------------DSEDLFEKLLQSYKSFS-KNCEP 219

Query: 242 VMKTFAEVELRGRKRCMVG 260
           V K F EV +RGRKR M+G
Sbjct: 220 VFKKFEEVRMRGRKRTMIG 238

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405972077|gb|EKC36864.1| TP53-regulating kinase [Crassostrea gigas]

 Score =  154 bits (390), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 131/258 (50%), Gaps = 56/258 (21%)

Query: 22  ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
           E +KQGAE +I KT++ G+  +VKERFSK YRHP LD++LT +R+ SEIR +++CRM+ I
Sbjct: 2   ELWKQGAEAKIHKTDFYGKPCIVKERFSKSYRHPSLDKSLTAQRVKSEIRAMLRCRMSGI 61

Query: 82  CLDDV----------------QKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSV 125
               V                    ++  I ++ S     E I  +  L +  IG TL +
Sbjct: 62  LTPTVYFVNMDSSCIYMEEMLDSVTVRDYIQSVQSSKTAVEAIETLTPLANT-IGHTLGI 120

Query: 126 MHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIV 182
           MH  NI+HGDLTTSNM+L  D   + L +IDFGLS  +  +EDK VDLYVL+R L     
Sbjct: 121 MHKQNIVHGDLTTSNMLLQGDPSNNRLCLIDFGLSFFENLSEDKGVDLYVLERAL----- 175

Query: 183 VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETV 242
                                       +ST         +FN IL +Y + N    + V
Sbjct: 176 ----------------------------ISTHPNT---EKLFNVILEAYCKSNDTGSKDV 204

Query: 243 MKTFAEVELRGRKRCMVG 260
           +    EV +RGRKR MVG
Sbjct: 205 IAKLEEVRMRGRKRTMVG 222

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|195127365|ref|XP_002008139.1| GI11986 [Drosophila mojavensis] gi|193919748|gb|EDW18615.1| GI11986 [Drosophila mojavensis]

 Score =  153 bits (386), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 56/258 (21%)

Query: 22  ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
           E  KQGAEGR++  E+ G S L+KERF KKYRHP LD  +T++R+ +E++   +C  A I
Sbjct: 4   EILKQGAEGRLYLGEFKGESCLIKERFVKKYRHPDLDTQITRQRMKAEVKAAGRCLAAGI 63

Query: 82  CLDDVQKSAIQT----------------LISNLDSQNITRENISDIIKLLSIEIGTTLSV 125
               +  S + T                 I    +++ T E    +++ L  +IG  +  
Sbjct: 64  LAPRILHSDLNTHKLYMEYFGSAQTAKQFIQKTVAES-TEEQAKPLLEELCTQIGGIIGK 122

Query: 126 MHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIV 182
           MH+NNIIHGDLTTSN++++ +   + ++ IDFGLS    +TEDK VDLYVL+R L     
Sbjct: 123 MHANNIIHGDLTTSNILINPNATGYDVIFIDFGLSHYNQATEDKGVDLYVLERAL----- 177

Query: 183 VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETV 242
                S  + Q Y                           +F++IL++YR++  K  E V
Sbjct: 178 ----LSTHSEQPY---------------------------LFDYILAAYRKECGKDEEAV 206

Query: 243 MKTFAEVELRGRKRCMVG 260
           +  F EV  RGRKR M+G
Sbjct: 207 LAKFEEVRARGRKRTMIG 224

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443712649|gb|ELU05858.1| hypothetical protein CAPTEDRAFT_206116 [Capitella teleta]

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 134/261 (51%), Gaps = 57/261 (21%)

Query: 19  QPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM 78
           Q  +  KQGAE +IF  ++ GR  +VKERF K YRHP LD +LT +R  SE+R +M+CR 
Sbjct: 8   QMPDVLKQGAEAKIFTCDFQGRPCIVKERFPKGYRHPVLDRSLTNQRTKSEVRSMMRCRN 67

Query: 79  ADICLD-----DVQKSAIQTLISNLDSQNITRENISDI----------IKLLSIEIGTTL 123
           + I        D++ + I   +    + +  RE+I  +          ++ L+ +IG+TL
Sbjct: 68  SGILTPTVFFVDLESNKI--YMQYFSNSSTVREHIIKVHSSTPDPIPALRPLAAKIGSTL 125

Query: 124 SVMHSNNIIHGDLTTSNMILSSDH---HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTI 180
            +MHSNNIIHGDLTTSNM+L  D     LVMIDFGL   +   EDK VDLYVL+R L   
Sbjct: 126 GLMHSNNIIHGDLTTSNMLLDGDPDELSLVMIDFGLGYTESVAEDKGVDLYVLERAL--- 182

Query: 181 IVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFE 240
                                         +ST         +F+ IL +Y++    Q  
Sbjct: 183 ------------------------------LSTHPNT---EALFDVILQNYKKAYVGQGS 209

Query: 241 T-VMKTFAEVELRGRKRCMVG 260
             V++   EV LRGRKR MVG
Sbjct: 210 VEVIRKLEEVRLRGRKRTMVG 230

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|332026633|gb|EGI66742.1| TP53-regulating kinase [Acromyrmex echinatior]

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 147/271 (54%), Gaps = 64/271 (23%)

Query: 18  LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           ++ +E   QGAE R++K  YLGR+ ++KERF K YRHP+LD  LTK+RI +E R +++ +
Sbjct: 1   MKDSELIVQGAEARLYKGLYLGRTCMMKERFVKNYRHPELDARLTKDRIRAEARAIIRAK 60

Query: 78  MADIC-----LDDVQKSAI-QTLISNLDS-QNITRENIS---DIIKLLSI---EIGTTLS 124
            A I      L D+++  I    I N    +N   ENIS   D++ LL      +GT ++
Sbjct: 61  SAGIATPALYLVDLERRRIYMEYIENATVLKNFIDENISGKIDMVHLLDFIGRGLGTVIA 120

Query: 125 VMHSNNIIHGDLTTSNMIL-------------SSDHHLVMIDFGLSQIKVSTEDKAVDLY 171
            +HS +IIHGDLTTSN++L              ++   VMIDFGL+++  + EDKAVDLY
Sbjct: 121 KLHSKHIIHGDLTTSNILLKNNSIESLYNNPSGAEAQFVMIDFGLARVDSTLEDKAVDLY 180

Query: 172 VLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY 231
           VL+R+L      A+C                                +  ++F+ +   Y
Sbjct: 181 VLERSLLN----AHC--------------------------------EVPELFSRVFHYY 204

Query: 232 RR--QNRKQFETVMKTFAEVELRGRKRCMVG 260
           ++  QN+KQ+E ++  + +V+ RGRKR MVG
Sbjct: 205 QQHYQNKKQYEQILAKYKQVQARGRKRLMVG 235

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194750291|ref|XP_001957561.1| GF10474 [Drosophila ananassae] gi|190624843|gb|EDV40367.1| GF10474 [Drosophila ananassae]

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 128/257 (49%), Gaps = 54/257 (21%)

Query: 22  ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
           E  KQGAEGR++   Y G S L+KERF KKYRHP LD  +T++R+ +E +   +C  A I
Sbjct: 4   EILKQGAEGRLYLGNYKGESCLIKERFVKKYRHPDLDTQITRQRMKAEAKAAGRCLAAGI 63

Query: 82  CLDDVQKSAIQT---LISNLDSQNITRENISDII------------KLLSIEIGTTLSVM 126
               +  S + T    +   D     ++ I + +            + L   IG  +  M
Sbjct: 64  LAPRILHSDLNTHKLYMEYFDKAQTAKQFIQETVAGKTEDLAKQALEELCTRIGGIIGKM 123

Query: 127 HSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVV 183
           HSN+IIHGDLTTSN++++    D+ +V IDFGLS    +TEDK VDLYVL+R L      
Sbjct: 124 HSNHIIHGDLTTSNILINPKEGDYEVVFIDFGLSHYNQATEDKGVDLYVLERAL------ 177

Query: 184 AYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM 243
               S  + Q Y                           +F  ILSSYR++  K  E V+
Sbjct: 178 ---LSTHSEQPY---------------------------LFESILSSYRKECGKDEEAVL 207

Query: 244 KTFAEVELRGRKRCMVG 260
             F EV  RGRKR M+G
Sbjct: 208 AKFEEVRARGRKRTMIG 224

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189235102|ref|XP_970365.2| PREDICTED: similar to CG10673 CG10673-PA [Tribolium castaneum]

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 18/178 (10%)

Query: 18  LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           ++  E F+QGAEGRIFK  YLG+  + KERF KKYRHP LD  LTKERI SE R +++C+
Sbjct: 1   MEGFELFRQGAEGRIFKGVYLGKPAIAKERFVKKYRHPDLDSHLTKERIKSESRSIIRCK 60

Query: 78  MADI-----CLDDVQKSAI--QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN 130
            A I      L D  +  I  +   +++  ++   +  +++I  L+++IG  L  MH+N+
Sbjct: 61  SAGIRTPALYLVDFNRRTIFMEYFENSIVVKDFIAQASNEVISKLALKIGAVLGKMHANS 120

Query: 131 IIHGDLTTSNMILSS-----------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNL 177
           IIHGDLTTSNM+L +           D  L+ IDFGLS ++ S EDK VDLYVL+R L
Sbjct: 121 IIHGDLTTSNMLLVNKNGQKSYSNLQDLELIFIDFGLSHVESSAEDKGVDLYVLERAL 178

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|324511773|gb|ADY44895.1| TP53-regulating kinase [Ascaris suum]

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 128/256 (50%), Gaps = 50/256 (19%)

Query: 19  QPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR- 77
           Q  + FKQGAE ++++  YLG+  ++KERF K YRHP +DE LTKERI +E+R + KC+ 
Sbjct: 21  QEEQPFKQGAEAKLYRCIYLGKEAVLKERFPKNYRHPAMDELLTKERIKAELRAICKCKQ 80

Query: 78  ----MADICLDDVQKSA--IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVM 126
               +  I   + +K+   ++ +   + ++        REN  +++      +G  +  +
Sbjct: 81  MGVDVPAIYFVNAEKNHFIMERIGGGVPARQYIEDVRNRENFREVLVEFGRRLGAIIGKI 140

Query: 127 HSNNIIHGDLTTSNMIL--SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVA 184
           H N I+HGDLT+SN++L      H+V++DFGLS+   + E K VDLYVL+R + +     
Sbjct: 141 HENGIMHGDLTSSNVLLRNGDPKHIVLLDFGLSEGNATPESKGVDLYVLERAINST---- 196

Query: 185 YCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK 244
                                             D    F  IL  Y+  N KQF  V K
Sbjct: 197 --------------------------------HADTEFFFESILQGYKEYNEKQFNAVFK 224

Query: 245 TFAEVELRGRKRCMVG 260
              E+ LRGRKR MVG
Sbjct: 225 KLEEIRLRGRKRDMVG 240

Source: Ascaris suum

Species: Ascaris suum

Genus: Ascaris

Family: Ascarididae

Order: Ascaridida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
ZFIN|ZDB-GENE-050522-123	231	tp53rk "TP53 regulating kinase	0.6	0.675	0.449	6e-32
TAIR|locus:2180637	226	AT5G26110 [Arabidopsis thalian	0.592	0.681	0.423	8.2e-28
FB|FBgn0035590	224	CG10673 [Drosophila melanogast	0.473	0.549	0.355	2.2e-27
UNIPROTKB|F1SBF6	259	TP53RK "Uncharacterized protei	0.630	0.633	0.407	1.2e-26
DICTYBASE|DDB_G0279977	252	bud32 "putative protein serine	0.573	0.591	0.417	3.2e-26
UNIPROTKB|A5PK80	253	TP53RK "Uncharacterized protei	0.630	0.648	0.385	1.1e-25
RGD|1591394	246	LOC685619 "similar to TP53-reg	0.630	0.666	0.396	2.2e-25
UNIPROTKB|Q96S44	253	TP53RK "TP53-regulating kinase	0.615	0.632	0.387	3.6e-25
UNIPROTKB|J9NUH9	302	TP53RK "Uncharacterized protei	0.630	0.543	0.396	1.6e-24
WB|WBGene00138717	245	F52C12.6 [Caenorhabditis elega	0.653	0.693	0.404	2e-24

ZFIN|ZDB-GENE-050522-123 tp53rk "TP53 regulating kinase" [Danio rerio (taxid:7955)]

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 76/169 (44%), Positives = 110/169 (65%)

Query:    18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
             L+ A+  KQGAE R++++ +LGRSV++KERF K YRHP++DE LT+ R T E+R +++CR
Sbjct:    15 LKEAQMIKQGAEARVYRSTFLGRSVIIKERFPKLYRHPEVDEKLTRRRTTQEVRSILRCR 74

Query:    78 MADICLD-----DVQKSAI--QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN 130
              A I        D     I  Q +++++  ++  R    D ++ L+  IG  L+ MH  +
Sbjct:    75 RAGISAPVVYFVDYATHCIFLQDVVNSVSVRDHIRSQ-PDGLQTLAERIGEVLAQMHDED 133

Query:   131 IIHGDLTTSNMILSS-----DHHLVMIDFGLSQIKVSTEDKAVDLYVLK 174
             +IHGDLTTSNM+L+S     D +LV+IDFGLS I    EDK VDLYVL+
Sbjct:   134 VIHGDLTTSNMLLTSGGQQQDFNLVLIDFGLSYISALPEDKGVDLYVLE 182

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

TAIR|locus:2180637 AT5G26110 [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 72/170 (42%), Positives = 104/170 (61%)

Query:    25 KQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLD 84
             KQGAE R+F++ + GR  +VKERFSKKYRHP LD  LT +R+ +E R + K R   +C  
Sbjct:    16 KQGAEARVFESTFAGRRSIVKERFSKKYRHPILDAKLTLKRLNAEARCMTKARKLGVCTP 75

Query:    85 DVQKSAIQTLISNLDSQNITRENISDII-----------KL--LSIEIGTTLSVMHSNNI 131
              +   A+ TL+ +L  + I   ++ DI            +L  ++ +IG  ++ +H   +
Sbjct:    76 VLY--AVDTLLHSLTLEYIEGVSVKDIFLEFGTNGVVEERLDDVAAQIGAAIAKLHDGGL 133

Query:   132 IHGDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTI 180
              HGDLTTSNM++ S  + LV+IDFGLS      EDKAVDLYVL+R L ++
Sbjct:   134 AHGDLTTSNMLVRSGTNQLVLIDFGLSVTSTLPEDKAVDLYVLERALLSM 183

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

FB|FBgn0035590 CG10673 [Drosophila melanogaster (taxid:7227)]

 Score = 214 (80.4 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
 Identities = 49/138 (35%), Positives = 78/138 (56%)

Query:    22 ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI 81
             E  KQGAEGR++  ++ G + L+KERF KKYRHP+L+  +T++R+ +E +   +C  A I
Sbjct:     4 EILKQGAEGRLYLGDFKGEACLIKERFVKKYRHPELNTQITRQRMKAEAKASGRCLAAGI 63

Query:    82 CLDDVQKSAIQT---LISNLDSQNITRENISDIIK----------LLSI--EIGTTLSVM 126
                 +  S + T    +   D+    ++ I + +           LL     IG  +  M
Sbjct:    64 LAPKILHSDLNTHKLYMEYFDAAKTAKQFIQETVSTQTEDEAKKCLLEFCTRIGEIIGKM 123

Query:   127 HSNNIIHGDLTTSNMILS 144
             HSN+IIHGDLTTSN++++
Sbjct:   124 HSNHIIHGDLTTSNILIN 141

GO:0004713 "protein tyrosine kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

UNIPROTKB|F1SBF6 TP53RK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 73/179 (40%), Positives = 101/179 (56%)

Query:    12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR 71
             E S + L+  E  KQGAE R+F+  + GR+ +VK RF K YRHP L+  L + R   E R
Sbjct:    33 ERSSLFLRGLELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPALEARLGRRRTVQEAR 92

Query:    72 GLMKCRMADICLD-----DVQKSA-----IQTLISNLDSQNITRENISDIIKLLSI--EI 119
              L++CR A IC       D   +      I+  ++  D    T E  +    LL +  +I
Sbjct:    93 ALLRCRRAGICAPVVFFVDYASNCLFMEEIEGSVTVRDYIESTMETENSPQSLLGLAKKI 152

Query:   120 GTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
             G  L+ MH  ++IHGDLTTSNM+L     + ++V+IDFGLS I    EDK VDLYVL++
Sbjct:   153 GQVLARMHDEDLIHGDLTTSNMLLKPPLEELNIVLIDFGLSFISALPEDKGVDLYVLEK 211

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0002039 "p53 binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

DICTYBASE|DDB_G0279977 bud32 "putative protein serine/threonine kinase Bud32" [Dictyostelium discoideum (taxid:44689)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 68/163 (41%), Positives = 99/163 (60%)

Query:    26 QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-----MAD 80
             QGAE + ++T+  G   +VKERFSK YRHP LD+ ++ +RI  E+R L KC+     +  
Sbjct:    43 QGAEAKTYETDLYGLKCIVKERFSKAYRHPILDQKISSKRILQEVRSLNKCKKKGIQVPS 102

Query:    81 ICLDDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIH 133
             + L D+  + I       +T+   L     + ++ + I  ++  E+G  + ++H  N+IH
Sbjct:   103 LYLVDIGNNRIYMEFIKGETVKHYLYKNQESTQHQNQIESIMK-ELGNQIGIIHEMNVIH 161

Query:   134 GDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
             GDLTTSNM+L  S + LV IDFGLS    S EDKAVDLYVL+R
Sbjct:   162 GDLTTSNMLLRESTNELVFIDFGLSYTSNSVEDKAVDLYVLER 204

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|A5PK80 TP53RK "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 69/179 (38%), Positives = 99/179 (55%)

Query:    12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR 71
             E +   L   E  KQGAE R+F+  + GR+ +VK RF K YRHP L+  L++ R   E R
Sbjct:    27 ERNSRFLSGLELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPTLEARLSRRRTVQEAR 86

Query:    72 GLMKCRMADICLDDV---QKSAIQTLISNLDSQNITRENISDIIK-------LLSIE--I 119
              L++CR A IC   V     ++    +  ++     R+ I   ++       LL +   I
Sbjct:    87 ALLRCRRAGICAPVVFFVDYASNCLFMEEIEGSVTVRDYIESTLETEKSPQSLLDLARTI 146

Query:   120 GTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
             G  L+ MH  ++IHGDLTTSNM+L       ++V+IDFGLS +    EDK VDLYVL++
Sbjct:   147 GQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFVSALPEDKGVDLYVLEK 205

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0002039 "p53 binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

RGD|1591394 LOC685619 "similar to TP53-regulating kinase (p53-related protein kinase) (Nori-2)" [Rattus norvegicus (taxid:10116)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 71/179 (39%), Positives = 99/179 (55%)

Query:    12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR 71
             E S + L   E  +QGAE R+F+  + GR+ +VK RF K YRHP+L+  L + R   E R
Sbjct:    20 ERSRLFLSGLELVQQGAEARVFRGRFQGRAAVVKHRFPKGYRHPELEARLGRRRTVQEAR 79

Query:    72 GLMKCRMADICLDDV----------QKSAIQTLISNLDSQNITRENISDIIKLLSI--EI 119
              L++CR A I    V              I+  ++  D    T E   D   LL +  +I
Sbjct:    80 ALLRCRRAGIAAPIVFFVDYASNCLYMEEIEDSVTVRDYIQSTMETKQDPQCLLDLARKI 139

Query:   120 GTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
             G  L+ +H  ++IHGDLTTSNM+L+      H+V+IDFGLS +    EDK VDLYVL++
Sbjct:   140 GQVLARLHDKDLIHGDLTTSNMLLTRPLEQLHIVLIDFGLSFVSGLPEDKGVDLYVLEK 198

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|Q96S44 TP53RK "TP53-regulating kinase" [Homo sapiens (taxid:9606)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 71/183 (38%), Positives = 101/183 (55%)

Query:    12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR 71
             E S   L   E  KQGAE R+F+  + GR+ ++K RF K YRHP L+  L + R   E R
Sbjct:    27 ERSSRFLSGLELVKQGAEARVFRGRFQGRAAVIKHRFPKGYRHPALEARLGRRRTVQEAR 86

Query:    72 GLMKCRMADI-------------CL--DDVQKSA-IQTLISNLDSQNITRENISDIIKLL 115
              L++CR A I             CL  ++++ S  ++  I +      T + +S++ K  
Sbjct:    87 ALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQGLSNLAKT- 145

Query:   116 SIEIGTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYV 172
                IG  L+ MH  ++IHGDLTTSNM+L       ++V+IDFGLS I    EDK VDLYV
Sbjct:   146 ---IGQVLARMHDEDLIHGDLTTSNMLLKPPLEQLNIVLIDFGLSFISALPEDKGVDLYV 202

Query:   173 LKR 175
             L++
Sbjct:   203 LEK 205

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0002039 "p53 binding" evidence=IDA

UNIPROTKB|J9NUH9 TP53RK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 71/179 (39%), Positives = 98/179 (54%)

Query:    12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR 71
             E +   L   E  KQGAE R+F+  + GR+ +VK RF K YRHP L+  L + R   E R
Sbjct:    76 ERNGRFLSGLELVKQGAEARVFRGRFQGRAAVVKHRFPKGYRHPALEARLGRRRTVQEAR 135

Query:    72 GLMKCRMADICLDDV--QKSAIQTL-ISNLDSQNITRENISDIIK-------LLSIE--I 119
              L++CR A I    V     A   L +  ++     R+ I   ++       LLS+   +
Sbjct:   136 ALLRCRRAGISAPVVFFVDYASNCLYMEEIEGSVTVRDYIQSTMETEKTPQSLLSLAKTV 195

Query:   120 GTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
             G  L+ MH  ++IHGDLTTSNM+L       ++V+IDFGLS I    EDK VDLYVL++
Sbjct:   196 GQVLARMHDEDLIHGDLTTSNMLLKPPVEQLNIVLIDFGLSFISALPEDKGVDLYVLEK 254

GO:0016020 "membrane" evidence=IEA

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

WB|WBGene00138717 F52C12.6 [Caenorhabditis elegans (taxid:6239)]

 Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
 Identities = 74/183 (40%), Positives = 101/183 (55%)

Query:    26 QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI---- 81
             QGAE ++ K  +LGR  ++KERFSK YRHP LD  L K R   EIRGL K R   I    
Sbjct:    34 QGAEAKVTKCIWLGRQAIIKERFSKGYRHPTLDTQLNKARTKQEIRGLNKARELGIHVPA 93

Query:    82 --CLDDVQKSAIQTLISNLDSQN-ITRENISDI-IKLLSI-EI-GTTLSVMHSNNIIHGD 135
                +D+ +   I   +    ++N I++ N +D   K     +I G  L  +H   +IHGD
Sbjct:    94 VYFIDNEKNQLIMEFVPGSTAKNWISQLNPADFDAKTREFGQIFGEKLGKLHRGGLIHGD 153

Query:   136 LTTSNMILSSD--HHLVMIDFGLS-QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL 192
             LTTSN+IL  D    +  IDFGLS Q KV+ E+K VDLYVL+R + +         +G +
Sbjct:   154 LTTSNIILRDDDLQKMTFIDFGLSSQGKVTPEEKGVDLYVLERAVISTHDKCAALIEGLM 213

Query:   193 QSY 195
             + Y
Sbjct:   214 EGY 216

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q4HYC1	BUD32_GIBZE	2, ., 7, ., 1, 1, ., 1	0.3308	0.7807	0.7748	yes	N/A
Q6BHA8	BUD32_DEBHA	2, ., 7, ., 1, 1, ., 1	0.3018	0.8076	0.8076	yes	N/A
Q54W07	BUD32_DICDI	2, ., 7, ., 1, 1, ., 1	0.3412	0.7423	0.7658	yes	N/A
Q96S44	PRPK_HUMAN	2, ., 7, ., 1, 1, ., 1	0.3458	0.7923	0.8142	yes	N/A
Q9P7N1	BUD32_SCHPO	2, ., 7, ., 1, 1, ., 1	0.36	0.7615	0.8319	yes	N/A
P53323	BUD32_YEAST	2, ., 7, ., 1, 1, ., 1	0.3079	0.7576	0.7547	yes	N/A
Q99PW4	PRPK_MOUSE	2, ., 7, ., 1, 1, ., 1	0.3549	0.8076	0.8606	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.824
3rd Layer	2.7.11	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	260
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	3e-45
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	3e-43
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	1e-42
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	3e-40
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	8e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-06
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	1e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-05
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	4e-05
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	6e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	1e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	4e-04
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	5e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	7e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	0.001
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.001
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.001
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.001
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.001
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.001
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	0.001
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.002
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	0.002
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	0.002
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	0.002
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.002
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	0.002
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.003
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.003
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.003
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.003
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	0.003
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.004
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	0.004
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	0.004
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.004
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.004
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.004
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.004
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.004

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score =  150 bits (381), Expect = 3e-45
 Identities = 76/239 (31%), Positives = 114/239 (47%), Gaps = 42/239 (17%)

Query: 25  KQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-- 82
           KQGAE  I+ T++LG   +VKER  K+YRHP+LDE L +ER   E R L K R A +   
Sbjct: 5   KQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVP 64

Query: 83  -LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNM 141
            + DV       ++  ++ + + ++ + +    L  E+G  +  +H   I+HGDLTTSN+
Sbjct: 65  IVYDVDPDNGLIVMEYIEGELL-KDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSNI 123

Query: 142 ILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVM 201
           ILS    +  IDFGL +     EDKAVDL+VL+R                L+S +     
Sbjct: 124 ILSGG-RIYFIDFGLGEFSDEVEDKAVDLHVLER---------------ALESTHE---- 163

Query: 202 IDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRCMVG 260
                               ++F   L  Y R+   + + V++   E+ LRGR     G
Sbjct: 164 -----------------KAEELFAAFLEGY-REEFGEAKEVLERLEEIRLRGRYVERRG 204

Length = 204

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score =  145 bits (367), Expect = 3e-43
 Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 47/236 (19%)

Query: 25  KQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-- 82
            +GAE  I+  ++LG   ++KER  K YRHP+LDE + +ER  +E R L + R A +   
Sbjct: 3   AKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTP 62

Query: 83  ----LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT 138
               +D   K+ +   I     +++  E   ++++    EIG  +  +H   I+HGDLTT
Sbjct: 63  VVYDVDPDNKTIVMEYIEGKPLKDVIEEGNDELLR----EIGRLVGKLHKAGIVHGDLTT 118

Query: 139 SNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHH 198
           SN+I+  D  L +IDFGL +     EDKAVDL+VLKR+L +                   
Sbjct: 119 SNIIVRDD-KLYLIDFGLGKYSDEIEDKAVDLHVLKRSLEST------------------ 159

Query: 199 LVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR 254
                           DK     ++F   L  YR     + + V++   E+ELRGR
Sbjct: 160 --------------HPDK---AEELFEAFLEGYRE-EFGEAKDVLERVKEIELRGR 197

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score =  144 bits (365), Expect = 1e-42
 Identities = 75/243 (30%), Positives = 112/243 (46%), Gaps = 55/243 (22%)

Query: 24  FKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD--- 80
            K+GAE  I+  ++LG   ++K R  K+YRHP+LDE + +ER   E R + + R A    
Sbjct: 4   IKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNV 63

Query: 81  --ICLDDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNI 131
             +   D +   I       + L   ++S  +    +S        EIG  +  +HS  I
Sbjct: 64  PAVYFVDPENFIIVMEYIEGEPLKDLINSNGMEELELSR-------EIGRLVGKLHSAGI 116

Query: 132 IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT 191
           IHGDLTTSNMIL S   + +IDFGL++     ED+AVDL+VL R+L              
Sbjct: 117 IHGDLTTSNMIL-SGGKIYLIDFGLAEFSKDLEDRAVDLHVLLRSL-------------- 161

Query: 192 LQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL 251
                             + +  D A +  + F   L  YR    ++ E V++   E+ L
Sbjct: 162 ------------------ESTHPDWAEELFEAF---LEGYREVMGEKAEEVLERVKEIRL 200

Query: 252 RGR 254
           RGR
Sbjct: 201 RGR 203

Length = 211

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score =  145 bits (367), Expect = 3e-40
 Identities = 79/246 (32%), Positives = 113/246 (45%), Gaps = 60/246 (24%)

Query: 20  PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA 79
           P     +GAE  I K EYLGR  ++KER  K YRHP+LDE L  ER  +E R L + R A
Sbjct: 337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA 396

Query: 80  DIC---LDDVQKSAIQTLISNLDSQNITRENI-----SDIIKL---LSIEIGTTLSVMHS 128
            +    + DV          + + + I  E I      D+++    L  ++G  ++ +H 
Sbjct: 397 GVPTPVIYDV----------DPEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHK 446

Query: 129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWS 188
             I+HGDLTTSN I+  D  L +IDFGL +     EDKAVDL+VLK++L +         
Sbjct: 447 AGIVHGDLTTSNFIVRDD-RLYLIDFGLGKYSDLIEDKAVDLHVLKQSLEST-------- 497

Query: 189 KGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAE 248
                                         DF +++   L  YR    +  E V++   E
Sbjct: 498 ----------------------------HYDFEELWEAFLEGYR--ETEGAEDVLERLKE 527

Query: 249 VELRGR 254
           +E RGR
Sbjct: 528 IEKRGR 533

Length = 535

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
           +G  G ++       G+ V +K    K+            E +  EI  L K       +
Sbjct: 3   EGGFGTVYLARDKKTGKKVAIK-IIKKEDSSSL------LEELLREIEILKKLNHPNIVK 55

Query: 78  MADICLDDVQKSAIQTLISNLD-----SQNITRENISDIIKLLSIEIGTTLSVMHSNNII 132
           +  +  D+     +              +N  + +  +I+++L ++I   L  +HSN II
Sbjct: 56  LYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRIL-LQILEGLEYLHSNGII 114

Query: 133 HGDLTTSNMILSSD-HHLVMIDFGLSQIKVSTEDK 166
           H DL   N++L SD   + + DFGLS++  S +  
Sbjct: 115 HRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL 149

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 4e-08
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD 169
           EI   L  +HS  II+ DL   N++L +D H+ + DFGL++   S   +   
Sbjct: 101 EIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 49.9 bits (120), Expect = 3e-07
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           D+ ++   EI   L  +HSN IIH DL   N+++ S+ HL + DFGLS
Sbjct: 93  DVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLS 140

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 19/144 (13%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK-------C 76
            G+ G ++K ++   G+ V VK    K+    K D+         EIR +++        
Sbjct: 9   SGSFGTVYKAKHKGTGKIVAVKI-LKKRSEKSKKDQ-----TARREIR-ILRRLSHPNIV 61

Query: 77  RMADICLDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIH 133
           R+ D   D      +       D  +          D  K ++++I   L  +HSN IIH
Sbjct: 62  RLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIH 121

Query: 134 GDLTTSNMILSSDHHLVMIDFGLS 157
            DL   N++L  +  + + DFGL+
Sbjct: 122 RDLKPENILLDENGVVKIADFGLA 145

Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 48.7 bits (117), Expect = 8e-07
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 24/145 (16%)

Query: 37  YLGRSVLVKERFS-KKYRHPKLDEALTKERITSEIRGLMKCRMADI-------------- 81
           Y  R     +  + K  +    ++   KE+I +EI+ L KC+  +I              
Sbjct: 17  YKARHKRTGKEVAIKVIKLESKEK---KEKIINEIQILKKCKHPNIVKYYGSYLKKDELW 73

Query: 82  -CLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN 140
             ++     +++ L+ + + Q +T   I+ + K    E+   L  +HSN IIH D+  +N
Sbjct: 74  IVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCK----ELLKGLEYLHSNGIIHRDIKAAN 128

Query: 141 MILSSDHHLVMIDFGLSQIKVSTED 165
           ++L+SD  + +IDFGLS     T+ 
Sbjct: 129 ILLTSDGEVKLIDFGLSAQLSDTKA 153

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 48.3 bits (116), Expect = 1e-06
 Identities = 17/51 (33%), Positives = 31/51 (60%)

Query: 117 IEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +++   L  +HS  I+H D+   N+ L+S+  + + DFG+S++  ST D A
Sbjct: 110 VQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 47.5 bits (114), Expect = 2e-06
 Identities = 17/48 (35%), Positives = 27/48 (56%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           D  +    +I + L  +HS  I+H DL   N++L  D H+ + DFGL+
Sbjct: 97  DEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLADFGLA 144

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 47.1 bits (113), Expect = 3e-06
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL--YVLKR 175
           L  +HS N+IH DL  SN++++S+  L + DFGL++     ED+   L  YV+ R
Sbjct: 116 LKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTR 170

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 19/53 (35%), Positives = 34/53 (64%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL 170
           E+   L  +H + IIH DL   NM++S++ H+ + DFGLS++ ++ E   +D+
Sbjct: 112 EVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDI 164

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.0 bits (110), Expect = 5e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
              +  + EI   L  +HS  IIH DL   N++L  D H+ + DFG +++
Sbjct: 102 KCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKV 151

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 46.3 bits (108), Expect = 7e-06
 Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 14/145 (9%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKC-------RMADICLDDVQKSAIQTLISNLDSQN 102
           K        ++   ER   EI+ L          ++ D   D+     +   +     ++
Sbjct: 28  KVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLED 87

Query: 103 ITRENI------SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFG 155
           + ++              +  +I + L  +HS  IIH D+   N++L  D   + +IDFG
Sbjct: 88  LLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFG 147

Query: 156 LSQIKVSTEDKAVDLYVLKRNLTTI 180
           L+++       +    +   ++ T 
Sbjct: 148 LAKLLPDPGSTSSIPALPSTSVGTP 172

Length = 384

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 17/51 (33%), Positives = 32/51 (62%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
            + IK L  ++   +  +HS+ I+H DL   N++++SD  + + DFGL++I
Sbjct: 106 PETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 16/49 (32%), Positives = 31/49 (63%)

Query: 111 IIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
            +K     +   ++ MH+N I+H DL  +N+++S+D  L + DFGL+++
Sbjct: 100 QVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARL 148

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
           +  + E+ + +  +HS NII+ DL   N++L S  H+V+ DFGL +  V  E+
Sbjct: 99  RFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE 151

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 26/39 (66%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           EI + L  +HS NII+ DL   N++L S  H+V+ DFGL
Sbjct: 104 EIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGL 142

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
           +  + EI + L  +HS NI++ DL   N++L S  H+V+ DFGL +  ++  D
Sbjct: 99  RFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD 151

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           +  + EI + L  +HS NI++ DL   N++L S  H+V+ DFGL +
Sbjct: 99  RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           D  K    E+   +  +H   IIH D+   N+++    HL + DFGLS+ 
Sbjct: 97  DWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRN 146

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 12/72 (16%)

Query: 108 ISDIIKLLSI-----EIGTTLS-------VMHSNNIIHGDLTTSNMILSSDHHLVMIDFG 155
           +SDI+K+ +      EI   L         +HSN  IH D+   N++L+ +    + DFG
Sbjct: 85  VSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFG 144

Query: 156 LSQIKVSTEDKA 167
           +S     T  K 
Sbjct: 145 VSGQLTDTMAKR 156

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 105 RENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST 163
           R+N S D ++  S EI   L  +H   I++ D+   N++L S+ H+V+ DFGLS+  +S 
Sbjct: 99  RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158

Query: 164 EDK 166
           E +
Sbjct: 159 EKE 161

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGL----SQIKVSTEDKAVDLYVLKR 175
           +HS N+IH DL  SN++L+SD  + + DFGL    S+++ + E+  +  YV  R
Sbjct: 123 IHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATR 176

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 17/43 (39%), Positives = 28/43 (65%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
           L  +HS N++H DL  SN++L+++  L + DFGL++I     D
Sbjct: 119 LKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD 161

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 19/86 (22%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 81  ICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN 140
           I ++  +  +++TL   + +  I  + IS II+    E+   L  +H   +IH D+  +N
Sbjct: 79  IIMEYAEGGSVRTL---MKAGPIAEKYISVIIR----EVLVALKYIHKVGVIHRDIKAAN 131

Query: 141 MILSSDHHLVMIDFGLSQIKVSTEDK 166
           +++++  ++ + DFG++ +      K
Sbjct: 132 ILVTNTGNVKLCDFGVAALLNQNSSK 157

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 15/46 (32%), Positives = 29/46 (63%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           I+  + +I   L+ +HSN I+H D+  +N+++ SD  + + DFG +
Sbjct: 103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCA 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  +H   II+ DL   N++L  D H+ + DFG+ +  ++ E KA
Sbjct: 104 EIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA 153

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 41.1 bits (96), Expect = 3e-04
 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 102 NITRENI--SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           +++RE +   +  +    EI + L  +HS ++++ D+   N++L  D H+ + DFGL + 
Sbjct: 85  HLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKE 144

Query: 160 KVSTE 164
            +S  
Sbjct: 145 GISDG 149

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 6/66 (9%)

Query: 94  LISNLDSQN--ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM 151
           L+  L  +   +  E I+ I++    E    L+ +H N +IH D+   N++L+ +  + +
Sbjct: 99  LVKGLRKKGKRLKEEWIAYILR----ETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKL 154

Query: 152 IDFGLS 157
           +DFG+S
Sbjct: 155 VDFGVS 160

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +K L +++   L  +H N IIH DL  SN++L+    L + DFGL+
Sbjct: 110 VKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLA 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
           E+   L  +H  +I++ DL   N++L +  H+ + DFGLS+  ++   
Sbjct: 104 ELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK 151

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 40.6 bits (95), Expect = 5e-04
 Identities = 20/56 (35%), Positives = 31/56 (55%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +K    E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 100 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 155

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD 169
           D I+ L  +I   L  +HS  IIH DL  SN+ ++ D  L ++DFGL++    T+D+   
Sbjct: 118 DHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR---HTDDEMTG 174

Query: 170 LYVLKR 175
            YV  R
Sbjct: 175 -YVATR 179

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS-TEDKA 167
           EI   L  +H   II+ D+   N++L S+ H+V+ DFGLS+  ++  E++A
Sbjct: 113 EIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA 163

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 40.0 bits (93), Expect = 7e-04
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR--EN 107
           + YR  +L + +  E +     GL+        L++     + T +   D  NI +  + 
Sbjct: 62  RTYRELRLLKHMKHENVI----GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 117

Query: 108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
             D ++ L  +I   L  +HS +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 118 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 168

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 39.7 bits (92), Expect = 8e-04
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 102 NITRENI--SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           +++RE +   D  +    EI + L  +HS  I++ DL   N++L  D H+ + DFGL +
Sbjct: 85  HLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)

Query: 104 TRENISDIIKLL-SIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS 162
            R+ I+    LL S +I   +  + S   IH DL   N+++ S+  + + DFGL+  KV 
Sbjct: 102 HRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLA--KVL 159

Query: 163 TEDKAVDLYVLK 174
            EDK  D Y +K
Sbjct: 160 PEDK--DYYYVK 169

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 39.6 bits (92), Expect = 0.001
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           +++ S EI   L  +H   II+ D+   N++L S+ H+V+ DFGLS+
Sbjct: 107 VQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 153

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 15/34 (44%), Positives = 24/34 (70%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           L  +HSN I+H D+  SN+++++D  L + DFGL
Sbjct: 113 LQYLHSNGILHRDIKGSNILINNDGVLKLADFGL 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 87  QKSAIQTLISNLDSQNITRENISDIIKL--LSIEIGTTLSVMHSNNIIHGDLTTSNMILS 144
               IQ L+  +D  ++   +I+D   L  ++ +I + ++ +H  +I+H D+  SN++++
Sbjct: 143 HNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN 202

Query: 145 SDHHLVMIDFGLSQIKVSTED 165
           S  ++ + DFG+S+I   T D
Sbjct: 203 SAKNVKIADFGVSRILAQTMD 223

Length = 353

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR-ENI 108
           + YR  +L + +  E +     GL+        +++  +  + T +   D  NI + + +
Sbjct: 60  RTYRELRLLKHMKHENVI----GLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKL 115

Query: 109 SDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           SD  ++ L  ++   L  +HS  IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 116 SDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR 166

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 17/50 (34%), Positives = 30/50 (60%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           D+ ++   E    L  +H+  I+H DL   N++++S  H+ + DFGLS+I
Sbjct: 101 DMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD 169
           + +K    EI   L  +HS  IIH D+   N++L    H+ + DF ++  KV+ +     
Sbjct: 100 EQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIA-TKVTPDTLTTS 158

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 18/50 (36%), Positives = 29/50 (58%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  +HS  II+ DL   N++L  D H+ + DFG+ +  V  +++A
Sbjct: 104 EIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA 153

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
           L  +HS N++H DL  SN++L+++  L + DFGL++      D   + YV+ R
Sbjct: 121 LKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTE-YVVTR 172

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           EI   L  +HS  I++ DL   N++L  + H+ + DFG ++
Sbjct: 109 EIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAK 149

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 17/66 (25%), Positives = 39/66 (59%), Gaps = 4/66 (6%)

Query: 100 SQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           ++++T +NI++++  +S+     +  +   N +H DL   N++L + H+  + DFGLS+ 
Sbjct: 89  NKHVTEKNITELVHQVSM----GMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKA 144

Query: 160 KVSTED 165
             + E+
Sbjct: 145 LGADEN 150

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 25/161 (15%)

Query: 19  QPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEA--LTKERITSEIRGL 73
           +      +GA G++FK   L   GR V +K     + R    +E   L+  R  + +R L
Sbjct: 4   ECVAEIGEGAYGKVFKARDLKNGGRFVALK-----RVRVQTGEEGMPLSTIREVAVLRHL 58

Query: 74  MK------CRMADIC-LDDVQKSAIQTLISNLDSQNITR--ENISD------IIKLLSIE 118
                    R+ D+C +    +    TL+     Q++T   + + +       IK +  +
Sbjct: 59  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 118

Query: 119 IGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           +   L  +HS+ ++H DL   N++++S   + + DFGL++I
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 16/53 (30%), Positives = 31/53 (58%)

Query: 115 LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
            S+++   +  + +NN +H DL   N+++S D+   + DFGL++   ST+D  
Sbjct: 107 FSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 3/57 (5%)

Query: 105 RENISDIIKL-LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI-DFGLSQI 159
           R+ ++ ++ L ++ +I + +  +   N IH DL   N ++  ++HLV + DFGLS++
Sbjct: 98  RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV-GENHLVKVADFGLSRL 153

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           IK   +     L  +HSN I+H DL  +N++++SD  L + DFGL+
Sbjct: 104 IKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLA 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK 160
           +HS  IIH DL  SN+++ SD  L ++DFGL++  
Sbjct: 134 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           L+ +HS+ +IH DL   N++L+ D  + + DFG+S    ST  K
Sbjct: 116 LNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK 159

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 16/49 (32%), Positives = 28/49 (57%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           EI + L  +HS ++++ DL   N++L  D H+ + DFGL +  +S    
Sbjct: 103 EIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI-DFGLSQI 159
            +  +L   ++   L  +HS N++H DL  +N+ ++++  ++ I DFGL++I
Sbjct: 113 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARI 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + E+   L  +H  N+I+ DL   N++L    H+ + DFGL ++ +  +DK
Sbjct: 96  RFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK 149

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 7/116 (6%)

Query: 46  ERFSKK-YRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNIT 104
           E F+K+ YR  +L + +  E +     GL+     D+ LD      +       D   + 
Sbjct: 55  ELFAKRAYRELRLLKHMKHENVI----GLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLM 110

Query: 105 R-ENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           + E +S D I+ L  ++   L  +H+  IIH DL   N+ ++ D  L ++DFGL++
Sbjct: 111 KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 14/43 (32%), Positives = 26/43 (60%)

Query: 117 IEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
            +I + +S +H   I+H D+ T N+ L+    + + DFG+S+I
Sbjct: 108 FQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKI 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           L  +HS N+IH DL  SN++++ D  L + DFG+
Sbjct: 120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGM 153

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           +D+ K    E+      +HS +II+ DL   N++L +  H+ + DFG ++
Sbjct: 117 NDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAK 166

Length = 329

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 17/129 (13%)

Query: 44  VKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDS--- 100
           ++E  S K     LDEA     + + +     CR+  ICL     S +Q LI+ L     
Sbjct: 44  LREATSPKANKEILDEAY----VMASVDNPHVCRLLGICL----TSTVQ-LITQLMPFGC 94

Query: 101 -QNITRENISDIIK--LLS--IEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG 155
             +  RE+  +I    LL+  ++I   ++ +    ++H DL   N+++ +  H+ + DFG
Sbjct: 95  LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFG 154

Query: 156 LSQIKVSTE 164
           L+++  + E
Sbjct: 155 LAKLLGADE 163

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 37.8 bits (87), Expect = 0.004
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)

Query: 90  AIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHL 149
           ++  LI N     +  E I+ I +    EI   LS +H + +IH D+   N++L+ +  +
Sbjct: 95  SVTDLIKNTKGNTLKEEWIAYICR----EILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 150

Query: 150 VMIDFGLS 157
            ++DFG+S
Sbjct: 151 KLVDFGVS 158

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 7/67 (10%)

Query: 109 SDIIKL--LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL--SQIK---V 161
           S ++ L  ++ EI   ++ MH +N +H DL   N  L+SD  + + D+G+  S+ K   +
Sbjct: 96  SQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155

Query: 162 STEDKAV 168
            TED   
Sbjct: 156 ETEDDKC 162

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 37.5 bits (88), Expect = 0.004
 Identities = 16/47 (34%), Positives = 29/47 (61%)

Query: 111 IIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +IK +  ++   L+  HS+ I+H DL   N++++ D  L + DFGL+
Sbjct: 99  LIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLA 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 15/31 (48%), Positives = 22/31 (70%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           +H N I+H DL TSN++L++   L + DFGL
Sbjct: 122 LHDNWILHRDLKTSNLLLNNRGILKICDFGL 152

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 18/55 (32%), Positives = 31/55 (56%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           I+++  ++   L  +HS  IIH DL   N++L+ D  + + DFG+S   V T  +
Sbjct: 112 IQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR 166

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 37.4 bits (86), Expect = 0.004
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK 160
           + +KL   ++   LS +H   I+H DL   N+++S    L + DFGL++ K
Sbjct: 103 ENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAK 153

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.2 bits (86), Expect = 0.004
 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 4/69 (5%)

Query: 91  IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV 150
           ++T +  +    +  E I D+++    +    L  +H+N I+H DL   N++++S   + 
Sbjct: 93  LRTYLDKVPPPGLPAETIKDLMR----QFLRGLDFLHANCIVHRDLKPENILVTSGGQVK 148

Query: 151 MIDFGLSQI 159
           + DFGL++I
Sbjct: 149 LADFGLARI 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	260
KOG0615|consensus	475		100.0
KOG0575|consensus	592		100.0
KOG0581|consensus	364		100.0
KOG0598|consensus	357		100.0
KOG0592|consensus	604		100.0
KOG0591|consensus	375		100.0
KOG0595|consensus	429		100.0
KOG0600|consensus	560		100.0
KOG0193|consensus	678		100.0
KOG0192|consensus	362		100.0
KOG0585|consensus	576		100.0
KOG0616|consensus	355		100.0
KOG0197|consensus	468		100.0
KOG0663|consensus	419		100.0
KOG0593|consensus	396		100.0
KOG0597|consensus	808		100.0
KOG0198|consensus	313		100.0
KOG0583|consensus	370		100.0
KOG0658|consensus	364		100.0
KOG0578|consensus	550		100.0
KOG0661|consensus	538		100.0
KOG0659|consensus	318		100.0
KOG0611|consensus	668		100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0660|consensus	359		100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG1187|consensus	361		100.0
KOG0588|consensus	786		100.0
KOG4721|consensus	904		100.0
KOG0694|consensus	694		100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0605|consensus	550		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0580|consensus	281		100.0
KOG0594|consensus	323		100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0589|consensus	426		100.0
KOG0033|consensus	355		100.0
KOG0599|consensus	411		100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.98
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.98
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.98
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.98
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.98
KOG0667|consensus	586		99.98
KOG1989|consensus	738		99.98
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.98
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.98
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.98
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.98
KOG0577|consensus	948		99.98
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.98
PHA02988	283	hypothetical protein; Provisional	99.98
KOG1026|consensus	774		99.98
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
KOG0582|consensus	516		99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
KOG0201|consensus	467		99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
KOG0032|consensus	382		99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
KOG4236|consensus	888		99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
KOG2345|consensus	302		99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
KOG0194|consensus	474		99.97
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
KOG0586|consensus	596		99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
KOG0584|consensus	632		99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
KOG0610|consensus	459		99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
KOG4717|consensus	864		99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
KOG0196|consensus	996		99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG1095|consensus	1025		99.96
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.96
KOG1035|consensus	1351		99.96
KOG0579|consensus	1187		99.96
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.96
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
KOG4250|consensus	732		99.96
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
PHA03211	461	serine/threonine kinase US3; Provisional	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
KOG4645|consensus	1509		99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
KOG3653|consensus	534		99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.96
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
KOG0666|consensus	438		99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.96
KOG0983|consensus	391		99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.96
KOG0596|consensus	677		99.96
KOG0574|consensus	502		99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
KOG0604|consensus	400		99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.96
KOG1094|consensus	807		99.96
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.96
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
KOG0986|consensus	591		99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
KOG0690|consensus	516		99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
KOG0662|consensus	292		99.96
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.95
KOG0607|consensus	463		99.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.95
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.95
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
KOG1151|consensus	775		99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.95
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.95
KOG3087|consensus	229		99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
KOG2052|consensus	513		99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
KOG0664|consensus	449		99.95
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.95
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
KOG0668|consensus	338		99.95
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.95
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.95
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.95
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.95
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.95
KOG0984|consensus	282		99.95
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
KOG1006|consensus	361		99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.95
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.95
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
PLN00009	294	cyclin-dependent kinase A; Provisional	99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.95
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.95
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.95
KOG4279|consensus	1226		99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
KOG0669|consensus	376		99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
KOG0614|consensus	732		99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
KOG0199|consensus	1039		99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.94
KOG4278|consensus	1157		99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.94
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.94
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.94
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.94
KOG1152|consensus	772		99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
KOG4257|consensus	974		99.94
KOG0603|consensus	612		99.94
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.94
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
KOG1025|consensus	1177		99.93
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.93
KOG0671|consensus	415		99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
KOG0612|consensus	1317		99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.92
KOG0665|consensus	369		99.92
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.92
KOG1163|consensus	341		99.92
KOG0696|consensus	683		99.92
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.92
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
KOG0587|consensus	953		99.91
KOG1027|consensus	903		99.91
PRK14879	211	serine/threonine protein kinase; Provisional	99.91
KOG0695|consensus	593		99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.9
KOG1345|consensus	378		99.9
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.9
KOG0608|consensus	1034		99.9
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.89
KOG0670|consensus	752		99.89
KOG0200|consensus	609		99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
KOG1165|consensus	449		99.88
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.88
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.88
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.88
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.87
KOG0576|consensus	829		99.85
KOG1167|consensus	418		99.82
KOG1290|consensus	590		99.82
smart00090	237	RIO RIO-like kinase.	99.81
PRK12274	218	serine/threonine protein kinase; Provisional	99.81
KOG1024|consensus	563		99.81
KOG1240|consensus	1431		99.8
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.79
KOG1164|consensus	322		99.79
PLN00181	793	protein SPA1-RELATED; Provisional	99.79
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.78
KOG0590|consensus	601		99.77
PRK10345	210	hypothetical protein; Provisional	99.76
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.75
KOG1166|consensus	974		99.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.72
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.69
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.62
KOG0606|consensus	1205		99.58
KOG0603|consensus	612		99.58
KOG0195|consensus	448		99.55
KOG4158|consensus	598		99.52
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.5
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.49
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.48
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.28
KOG1033|consensus	516		99.25
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.22
KOG0590|consensus	601		99.17
KOG1023|consensus	484		99.14
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.12
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.0
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.97
PRK09902	216	hypothetical protein; Provisional	98.96
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.93
KOG0601|consensus	524		98.91
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.88
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.73
KOG0601|consensus	524		98.72
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.69
KOG1243|consensus	690		98.65
KOG3741|consensus	655		98.52
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.48
KOG2268|consensus	465		98.44
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.43
COG4248	637	Uncharacterized protein with protein kinase and he	98.24
PF01636	239	APH: Phosphotransferase enzyme family This family	98.23
KOG1266|consensus	458		98.06
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	97.99
KOG2137|consensus	700		97.96
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.87
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.83
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.82
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.78
KOG0606|consensus	1205		97.78
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.75
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.68
KOG2270|consensus	520		97.6
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.6
KOG1235|consensus	538		97.59
PLN02876	822	acyl-CoA dehydrogenase	97.55
PRK05231	319	homoserine kinase; Provisional	97.52
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.47
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.35
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.19
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.05
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	97.01
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.91
PRK12396	409	5-methylribose kinase; Reviewed	96.89
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.8
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.65
PLN02756	418	S-methyl-5-thioribose kinase	96.53
PRK10593	297	hypothetical protein; Provisional	96.51
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.89
PTZ00384	383	choline kinase; Provisional	95.84
PLN02236	344	choline kinase	95.76
PRK10271	188	thiK thiamine kinase; Provisional	95.33
PTZ00296	442	choline kinase; Provisional	95.13
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.03
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.98
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.8
COG2334	331	Putative homoserine kinase type II (protein kinase	94.6
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	94.57
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.54
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.2
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	93.87
KOG1035|consensus	1351		93.69
KOG0576|consensus	829		93.62

>KOG0615|consensus

Probab=100.00  E-value=4.8e-41  Score=272.02  Aligned_cols=231  Identities=19%  Similarity=0.187  Sum_probs=176.9

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----Ee
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LD   84 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~   84 (260)
                      .+..+++|.+.+.||+|+||.|-+|..  +|+.||||++..+......- .........+|++++++++||||+    ++
T Consensus       167 pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~HP~IV~~~d~f  245 (475)
T KOG0615|consen  167 PKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSHPNIVRIKDFF  245 (475)
T ss_pred             cchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc-cccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence            344667788999999999999999998  49999999987766544321 111233468999999999999999    44


Q ss_pred             CCCch-hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC---CcEEEEe
Q psy7935          85 DVQKS-AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMID  153 (260)
Q Consensus        85 ~~~~~-~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~---~~~kl~D  153 (260)
                      +.... ++       |+|++++-.   .+.+.+.....++.|++.|+.|||++||+||||||+|||+..+   ..+||+|
T Consensus       246 ~~~ds~YmVlE~v~GGeLfd~vv~---nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItD  322 (475)
T KOG0615|consen  246 EVPDSSYMVLEYVEGGELFDKVVA---NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITD  322 (475)
T ss_pred             ecCCceEEEEEEecCccHHHHHHh---ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecc
Confidence            44443 33       555555544   3478888889999999999999999999999999999999985   8999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc----HHHHH
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMF  224 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~  224 (260)
                      ||+|+......-           ..+++++.-+.+|+.+     ..+..++|+||+||+++-.++|..|++    ...+.
T Consensus       323 FGlAK~~g~~sf-----------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~  391 (475)
T KOG0615|consen  323 FGLAKVSGEGSF-----------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLK  391 (475)
T ss_pred             cchhhcccccee-----------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHH
Confidence            999998754321           1123333334444444     334468999999999999999999988    44588


Q ss_pred             HHHHhhccccCCccH-------HHHHHHHHHhccccccc
Q psy7935         225 NWILSSYRRQNRKQF-------ETVMKTFAEVELRGRKR  256 (260)
Q Consensus       225 ~~~~~~~~~~~~~~~-------~~il~~l~~~~~~~r~~  256 (260)
                      +++..+-..+.++.|       .+++++|..+++.+|..
T Consensus       392 eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s  430 (475)
T KOG0615|consen  392 EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS  430 (475)
T ss_pred             HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC
Confidence            899988766655555       66788889999999975

>KOG0575|consensus

Probab=100.00  E-value=3.6e-39  Score=272.65  Aligned_cols=222  Identities=16%  Similarity=0.213  Sum_probs=177.8

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      .+|...+.||+|+|+.||.+++  +|+.||+|++..+...     ....++.+.+|+++.++++||||+     |.|...
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-----k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-----KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-----CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCc
Confidence            6788999999999999999998  5999999997665433     333477899999999999999999     444444


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      -++       ++|++++...   +.+++.++..+++||+.||.|||+++|+|||||..|++++.+.++||+|||+|....
T Consensus        93 VYivLELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE  169 (592)
T ss_pred             eEEEEEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeec
Confidence            343       8888888743   589999999999999999999999999999999999999999999999999998887


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      ...++.          .++++++-+.+|+.+  ...+..+||||+||++|-+++|+-|++   .++..+.+-...   |.
T Consensus       170 ~~~Erk----------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~  239 (592)
T KOG0575|consen  170 YDGERK----------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS  239 (592)
T ss_pred             Cccccc----------ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc
Confidence            654332          355555556677766  557788999999999999999999988   455555544432   33


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .-+..+.+++.+|.+-++..|.
T Consensus       240 ~ls~~A~dLI~~lL~~~P~~Rp  261 (592)
T KOG0575|consen  240 HLSAEAKDLIRKLLRPNPSERP  261 (592)
T ss_pred             ccCHHHHHHHHHHhcCCcccCC
Confidence            3456667888888777777765

>KOG0581|consensus

Probab=100.00  E-value=4.3e-39  Score=258.15  Aligned_cols=220  Identities=18%  Similarity=0.259  Sum_probs=181.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .++.++.||+|+.|+||+++++  ++-+|+|++...       .+...++++.+|+++++..+||+|+ |++    ... 
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-------~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~-  151 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-------IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE-  151 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-------CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc-
Confidence            6788999999999999999994  899999986321       1223467899999999999999999 443    333 


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+..+|||+.++.+      .+..++..+..++.++++||.|||+ ++|+||||||+|||+++.|.+||+|||.++....
T Consensus       152 ~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  152 EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence            35668999988877      3448899999999999999999996 8999999999999999999999999999987655


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--------HHHHHHHHHhhcc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--------FRDMFNWILSSYR  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~  232 (260)
                      +            ...++.++..+++|+..  ..++.++||||||+.++|+.+|+.|..        +-+++..++.+.+
T Consensus       232 S------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp  299 (364)
T KOG0581|consen  232 S------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP  299 (364)
T ss_pred             h------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC
Confidence            4            22466677778888877  568999999999999999999988643        5688888888655


Q ss_pred             ccC-----CccHHHHHHHHHHhccccccc
Q psy7935         233 RQN-----RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~-----~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..-     ++++.+++..|.+.+++.|..
T Consensus       300 P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s  328 (364)
T KOG0581|consen  300 PRLPEGEFSPEFRSFVSCCLRKDPSERPS  328 (364)
T ss_pred             CCCCcccCCHHHHHHHHHHhcCCcccCCC
Confidence            433     455899999999999888864

>KOG0598|consensus

Probab=100.00  E-value=1.1e-39  Score=261.47  Aligned_cols=228  Identities=19%  Similarity=0.241  Sum_probs=181.2

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----Ee
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LD   84 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~   84 (260)
                      ....+.|++++.||.|+||.||.++.  +++-+|+|++.++..-     ..........|..++.+++||.|+     |.
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv-----~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQ   95 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIV-----EKKEVRHTKAERNILSKIKHPFIVKLIYSFQ   95 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhh-----hhhhHHHHHHHHHHHHhCCCCcEeeeEEecc
Confidence            34466799999999999999999997  5999999987655432     222246688999999999999999     55


Q ss_pred             CCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          85 DVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        85 ~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      +....++  +.+|+.++.+      +..++++.++.++.+|+.||.|||++||+||||||+|||+|.+|+++|+|||+++
T Consensus        96 t~~kLyl--Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k  173 (357)
T KOG0598|consen   96 TEEKLYL--VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCK  173 (357)
T ss_pred             cCCeEEE--EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccch
Confidence            5555444  5555555433      4479999999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc--
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY--  231 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~--  231 (260)
                      ..-...+..          .+++++..+++|+.+  ..++..+|.||+|+++++|++|.-|+.   ..+++++++.+-  
T Consensus       174 ~~~~~~~~t----------~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~  243 (357)
T KOG0598|consen  174 EDLKDGDAT----------RTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLP  243 (357)
T ss_pred             hcccCCCcc----------ccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCC
Confidence            654332221          135566666666665  679999999999999999999988887   677888888765  


Q ss_pred             --cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        +........++++.|...+++.|..
T Consensus       244 ~~p~~ls~~ardll~~LL~rdp~~RLg  270 (357)
T KOG0598|consen  244 LPPGYLSEEARDLLKKLLKRDPRQRLG  270 (357)
T ss_pred             CCCccCCHHHHHHHHHHhccCHHHhcC
Confidence              2223467899999999999998864

>KOG0592|consensus

Probab=100.00  E-value=2e-39  Score=270.56  Aligned_cols=237  Identities=15%  Similarity=0.162  Sum_probs=187.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~   84 (260)
                      ....+|...+.||.|+|+.|++|++  +++++|||++.++..     .....-+-+..|-+++.++ .||+|+     |.
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~I-----ike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ  144 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYI-----IKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQ  144 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHH-----HhhcccchhhHHHHHHHHhhCCCCeEEEEEEee
Confidence            3445688899999999999999998  599999998655432     2222234466788889999 899999     66


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      |....++       |+|.++|....   .+++...+.++.+|+.||+|||++|||||||||+|||+|.+++++|.|||.|
T Consensus       145 D~~sLYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsA  221 (604)
T KOG0592|consen  145 DEESLYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSA  221 (604)
T ss_pred             cccceEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeecccc
Confidence            6555544       88888887754   7999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccc---cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------HHHHHHH
Q psy7935         158 QIKVSTEDK---AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNW  226 (260)
Q Consensus       158 ~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~  226 (260)
                      +.+......   ..+--.......++++++.+.+|+.+  +..++.+|+|+|||++|.|+.|.-|+.      .-+-+..
T Consensus       222 K~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~  301 (604)
T KOG0592|consen  222 KILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA  301 (604)
T ss_pred             ccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH
Confidence            988754322   11111111113568889999999888  668899999999999999999998887      2233334


Q ss_pred             HHhhccccCCccHHHHHHHHHHhcccccccc
Q psy7935         227 ILSSYRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       227 ~~~~~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +.-..+...++...+++++|..++++.|.++
T Consensus       302 l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~  332 (604)
T KOG0592|consen  302 LDYEFPEGFPEDARDLIKKLLVRDPSDRLTS  332 (604)
T ss_pred             hcccCCCCCCHHHHHHHHHHHccCccccccH
Confidence            4444677778999999999999999999764

>KOG0591|consensus

Probab=100.00  E-value=4.5e-40  Score=254.81  Aligned_cols=229  Identities=15%  Similarity=0.215  Sum_probs=178.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      ..+...|+++++||+|+||.||++..  .|..+|.|.+.   +.   ..+...++.+..|+.+|++++||||+ +++   
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~---f~---~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f   88 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQ---FG---MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF   88 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcc---hh---hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh
Confidence            34445699999999999999999997  59999999754   22   23334578899999999999999999 333   


Q ss_pred             -CCchhhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhh--CC--ceecCCCCCcEEEccCCcEE
Q psy7935          86 -VQKSAIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHS--NN--IIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        86 -~~~~~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~--~~--i~H~dlkp~Nill~~~~~~k  150 (260)
                       ...-.++.++|++.++.+          .+.++++.+|+++.|++.||.++|+  .+  |+||||||.||+|+.+|.+|
T Consensus        89 ~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvK  168 (375)
T KOG0591|consen   89 IEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVK  168 (375)
T ss_pred             hccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCcee
Confidence             233345678888777655          5569999999999999999999999  45  99999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHH
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFN  225 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~  225 (260)
                      |+|||+++.+.+....+          -+.++++++++|+..  ..++.++|+||+||+++||..-.-|+.   ..++..
T Consensus       169 LGDfGL~r~l~s~~tfA----------~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~  238 (375)
T KOG0591|consen  169 LGDFGLGRFLSSKTTFA----------HSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK  238 (375)
T ss_pred             eccchhHhHhcchhHHH----------HhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH
Confidence            99999999876654322          245667777788877  679999999999999999988777776   455555


Q ss_pred             HHHhhccc-----cCCccHHHHHHHHHHhccccccc
Q psy7935         226 WILSSYRR-----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       226 ~~~~~~~~-----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++..+..+     ..+.++.+++.-|..+++..|..
T Consensus       239 KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~  274 (375)
T KOG0591|consen  239 KIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPD  274 (375)
T ss_pred             HHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence            55555432     22345677777777777777753

>KOG0595|consensus

Probab=100.00  E-value=5.8e-39  Score=259.88  Aligned_cols=199  Identities=20%  Similarity=0.251  Sum_probs=154.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      ..+.|...+.||+|+|++||+|+++  +.+||||.+..+... ++     ..+.+.+|+++|+.++||||+ +++.  ..
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k-----~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~   81 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KK-----LVELLLSEIKILKELKHPNIVRLLDCIEDD   81 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HH-----HHHHHHHHHHHHHhcCCcceeeEEEEEecC
Confidence            3455778889999999999999984  899999997665432 11     256788999999999999999 5443  23


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC------CcEEEEeecc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD------HHLVMIDFGL  156 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~------~~~kl~DFg~  156 (260)
                      ..++.+|||+.++.+      .+.++++.++.++.|++.||++||+++|+||||||.||||+..      -.+||+|||+
T Consensus        82 ~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf  161 (429)
T KOG0595|consen   82 DFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF  161 (429)
T ss_pred             CeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence            345556666665544      2369999999999999999999999999999999999999984      5799999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      |+......-           ..+.++...+++|+.+  ..|+.|+|+||.|+++|++++|..|++   ..+++..+-.
T Consensus       162 AR~L~~~~~-----------a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k  228 (429)
T KOG0595|consen  162 ARFLQPGSM-----------AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK  228 (429)
T ss_pred             hhhCCchhH-----------HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence            988764321           1123333334455554  679999999999999999999999988   5666654433

>KOG0600|consensus

Probab=100.00  E-value=1.4e-38  Score=263.46  Aligned_cols=187  Identities=18%  Similarity=0.229  Sum_probs=148.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+.|+.+++||+|+||.||+|++  +|+-||+|.+........ +     .....+||.+|+++.||||+     +.+..
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~-~-----~~t~~REI~ILr~l~HpNIikL~eivt~~~  189 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG-F-----PITAIREIKILRRLDHPNIIKLEEIVTSKL  189 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc-c-----hHHHHHHHHHHHhcCCCcccceeeEEEecC
Confidence            34588899999999999999998  599999998765543221 1     34577999999999999999     33333


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...+|.+++|+.+...      +-.+++.++..++.|++.||.|||++||+|||||.+|||||++|.+||+|||+|+++.
T Consensus       190 ~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  190 SGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT  269 (560)
T ss_pred             CceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence            5566778888765321      3359999999999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      ......          ++-.....|+.++++    ..|++++|+||.||++.|+.+|+..
T Consensus       270 ~~~~~~----------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI  319 (560)
T KOG0600|consen  270 PSGSAP----------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPI  319 (560)
T ss_pred             CCCCcc----------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCC
Confidence            654321          333344444444444    5699999999999999999998653

>KOG0193|consensus

Probab=100.00  E-value=7.4e-38  Score=264.23  Aligned_cols=223  Identities=19%  Similarity=0.257  Sum_probs=176.2

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ   87 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~   87 (260)
                      +.++.+.++..+.+.||+|+||+||+|+|.| .||||++........      ..+.|++|+.++++.+|.||+ |.+..
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~------qlqaFKnEVa~lkkTRH~NIlLFMG~~  457 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPE------QLQAFKNEVAVLKKTRHENILLFMGAC  457 (678)
T ss_pred             cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHH------HHHHHHHHHHHHhhcchhhheeeehhh
Confidence            6778888889999999999999999999988 599999876554322      357899999999999999999 55542


Q ss_pred             ---chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          88 ---KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ---~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                         ...+       .+|+.+++-.  ...+.....+.|+.||++|+.|||.++|+|||||..||++.+++.|||+|||++
T Consensus       458 ~~p~~AIiTqwCeGsSLY~hlHv~--etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLa  535 (678)
T KOG0193|consen  458 MNPPLAIITQWCEGSSLYTHLHVQ--ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLA  535 (678)
T ss_pred             cCCceeeeehhccCchhhhhccch--hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccce
Confidence               2122       6677776654  356888999999999999999999999999999999999999999999999998


Q ss_pred             ccccccc-------cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccc-------------
Q psy7935         158 QIKVSTE-------DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKA-------------  217 (260)
Q Consensus       158 ~~~~~~~-------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~-------------  217 (260)
                      .......       ....-.|.+++++.          .+...++++.+|+||||+++||+++|..|             
T Consensus       536 tvk~~w~g~~q~~qp~gsilwmAPEvIR----------mqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmV  605 (678)
T KOG0193|consen  536 TVKTRWSGEQQLEQPHGSLLWMAPEVIR----------MQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMV  605 (678)
T ss_pred             eeeeeeccccccCCCccchhhhcHHHHh----------hcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEe
Confidence            6543221       11222233333322          23347799999999999999999999864             


Q ss_pred             -----------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         218 -----------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       218 -----------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                       .++.+++..|+. +..+.||.+.+++..|+++-.
T Consensus       606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~-~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWK-FDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             cccccCccchhhhccCHHHHHHHHHHHHh-cCcccCccHHHHHHHHHHhhh
Confidence                             347789999998 555568999999998887754

>KOG0192|consensus

Probab=100.00  E-value=2.4e-37  Score=257.83  Aligned_cols=217  Identities=20%  Similarity=0.321  Sum_probs=167.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCcc-EEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRS-VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK-   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~-   88 (260)
                      ...++..+.+|+|+||.||+|.+.|.. ||||.+........     . ...|.+|+.++.+++||||+ |++.   .. 
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~-----~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~  113 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDE-----S-RKAFRREASLLSRLRHPNIVQFYGACTSPPG  113 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChH-----H-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            334566778999999999999999998 99998654332211     1 57899999999999999999 4443   22 


Q ss_pred             -hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC-ceecCCCCCcEEEccCC-cEEEEeecccc
Q psy7935          89 -SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN-IIHGDLTTSNMILSSDH-HLVMIDFGLSQ  158 (260)
Q Consensus        89 -~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~-~~kl~DFg~~~  158 (260)
                       .++       |+|.+++.... ...++...+..++.||++||.|||+++ |+||||||+|+|++.++ ++||+|||+++
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~-~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr  192 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKR-KRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR  192 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence             223       77777776531 457999999999999999999999999 99999999999999997 99999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeec-Cccccc----cccccceeEeecceeeeeccccccc---------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTLQ----SYNHHLVMIDFGLSQIKVSTEDKAV---------------  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~di~s~g~~~~~~~~~~~~~---------------  218 (260)
                      .........           +..++.+.| +|+.+.    .++.|+|+||||+++||++|+..|+               
T Consensus       193 ~~~~~~~~~-----------~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~  261 (362)
T KOG0192|consen  193 EKVISKTSM-----------TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG  261 (362)
T ss_pred             eeccccccc-----------cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            765432111           111222333 444443    4999999999999999999997542               


Q ss_pred             ------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 ------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 ------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                  .+..+++.||...+.. ||++.+++..|..+.
T Consensus       262 ~~Rp~~p~~~~~~l~~l~~~CW~~dp~~-RP~f~ei~~~l~~~~  304 (362)
T KOG0192|consen  262 GLRPPIPKECPPHLSSLMERCWLVDPSR-RPSFLEIVSRLESIM  304 (362)
T ss_pred             CCCCCCCccCCHHHHHHHHHhCCCCCCc-CCCHHHHHHHHHHHH
Confidence                        2568888898877765 789999999887654

>KOG0585|consensus

Probab=100.00  E-value=2.5e-37  Score=254.45  Aligned_cols=240  Identities=18%  Similarity=0.185  Sum_probs=181.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchh------hHHHHHHHHHHHHhhhcccCCCCeE----E
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKL------DEALTKERITSEIRGLMKCRMADIC----L   83 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~------~~~~~~~~~~~e~~~l~~~~h~~i~----~   83 (260)
                      +.|++.+.||+|.||.|-+|++.  ++.||||++..+..+....      ......+.+.+|+.+++++.||||+    +
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             hheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            45889999999999999999984  8999999976655432211      1111235799999999999999999    3


Q ss_pred             eC-CCchhhhhHHHhhccCcc-----ccc-chHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          84 DD-VQKSAIQTLISNLDSQNI-----TRE-NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        84 ~~-~~~~~~~~l~~~l~~~~~-----~~~-~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      .+ .....+|.+++|+..+..     .+. +++.+++.++.+++.||+|||.|||+||||||+|+|++++|++||+|||.
T Consensus       177 LDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGV  256 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGV  256 (576)
T ss_pred             ecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccce
Confidence            33 345566889999987655     444 88999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcc-c-cccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG-T-LQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      +.......+...|. .+....+++..++|+..-+ . ..+...+.|+||+|+++|.++.|.+|+-   .-++++++...-
T Consensus       257 s~~~~~~~~~~~d~-~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~p  335 (576)
T KOG0585|consen  257 SNEFPQGSDEGSDD-QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDP  335 (576)
T ss_pred             eeecccCCccccHH-HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCc
Confidence            98776654444433 2233445555555543222 1 2446678999999999999999999987   455666655532


Q ss_pred             ---ccc--CCccHHHHHHHHHHhccccccc
Q psy7935         232 ---RRQ--NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ---~~~--~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         +..  ......+++++|.+.++..|..
T Consensus       336 L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~  365 (576)
T KOG0585|consen  336 LEFPENPEINEDLKDLIKRLLEKDPEQRIT  365 (576)
T ss_pred             ccCCCcccccHHHHHHHHHHhhcChhheee
Confidence               221  2456789999999888887753

>KOG0616|consensus

Probab=100.00  E-value=1.1e-36  Score=237.48  Aligned_cols=229  Identities=17%  Similarity=0.171  Sum_probs=184.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee-C-CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD-D-VQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~-~-~~   87 (260)
                      ..-+.|+.+..||.|+||+|.++++  +|.-+|+|++...     ++.+.-..+...+|..+|+.+.||.++ ++ . ..
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~-----~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d  115 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQ-----KVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD  115 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHH-----HHHHHHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence            3345688999999999999999998  4889999986443     333333456788999999999999999 22 1 22


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...++.+++|+.++.+      .+.++++.++.++.|++.||+|||+++|++|||||+|||+|.+|++||.|||+|+...
T Consensus       116 ~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  116 NSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS  195 (355)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence            3334445566555444      3369999999999999999999999999999999999999999999999999998654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      ..             .+++++++.+.+|+..  ..+..++|-|+||+.++||+.|..|+.   .-++.++++++.   |+
T Consensus       196 ~r-------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~  262 (355)
T KOG0616|consen  196 GR-------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS  262 (355)
T ss_pred             Cc-------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc
Confidence            32             3566666667777766  668899999999999999999998877   567777887764   56


Q ss_pred             cCCccHHHHHHHHHHhcccccccccC
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKRCMV  259 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~~~~  259 (260)
                      ...+.+.++++.|.+++...|+.++-
T Consensus       263 ~fs~~~kdLl~~LL~vD~t~R~gnlk  288 (355)
T KOG0616|consen  263 YFSSDAKDLLKKLLQVDLTKRFGNLK  288 (355)
T ss_pred             ccCHHHHHHHHHHHhhhhHhhhcCcC
Confidence            66788999999999999999987764

>KOG0197|consensus

Probab=100.00  E-value=2e-36  Score=253.02  Aligned_cols=185  Identities=19%  Similarity=0.210  Sum_probs=145.2

Q ss_pred             eccccccccCcceeeccCCceeEEEEEEcCc-cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----Ee
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEYLGR-SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LD   84 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~   84 (260)
                      .++...+.+..++.||+|-||.||.|.+++. +||+|.+......         .+.|.+|++++++++|+||+    ++
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~---------~~~f~~Ea~iMk~L~H~~lV~l~gV~  270 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS---------PEAFLREAQIMKKLRHEKLVKLYGVC  270 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC---------hhHHHHHHHHHHhCcccCeEEEEEEE
Confidence            3455566688899999999999999999866 9999997655332         46788999999999999999    33


Q ss_pred             CCCc-hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          85 DVQK-SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        85 ~~~~-~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      ...+ .++       |+|.+|+.... +..+....++.++.|||+|++||.++++|||||.++|||++++..|||+|||+
T Consensus       271 ~~~~piyIVtE~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGL  349 (468)
T KOG0197|consen  271 TKQEPIYIVTEYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGL  349 (468)
T ss_pred             ecCCceEEEEEecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccc
Confidence            3323 222       99999998743 56788899999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ec-Ccccc--ccccccceeEeecceeeeecccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CW-SKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      |+...+..-...+-           +..| .| +|+.+  +.++.++|+||||++++|+.|-.
T Consensus       350 Ar~~~d~~Y~~~~~-----------~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G  401 (468)
T KOG0197|consen  350 ARLIGDDEYTASEG-----------GKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYG  401 (468)
T ss_pred             ccccCCCceeecCC-----------CCCCceecCHHHHhhCCcccccceeehhhhHHHHhccC
Confidence            99544332111110           1111 23 44444  66999999999999999998843

>KOG0663|consensus

Probab=100.00  E-value=5.1e-37  Score=242.90  Aligned_cols=186  Identities=22%  Similarity=0.268  Sum_probs=149.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      .+.+.|+.++.|++|+||.||+|+++  ++-||+|++.+..-... +     .-.-++|+.++.+.+||||+     +.+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G-F-----PItsLREIniLl~~~H~NIV~vkEVVvG  146 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG-F-----PITSLREINILLKARHPNIVEVKEVVVG  146 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC-C-----cchhHHHHHHHHhcCCCCeeeeEEEEec
Confidence            44456899999999999999999994  89999999876652211 1     23467999999999999999     666


Q ss_pred             CCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .....++.+|+|+++...      .+.+.+.++..++.|++.|++|||++.|+||||||+|+|+++.|.+||+|||+|+.
T Consensus       147 ~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~  226 (419)
T KOG0663|consen  147 SNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLARE  226 (419)
T ss_pred             cccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhh
Confidence            666667778888876321      44688999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      +.++...-           +...+..|+ +|+-+   ..|+..+||||+||++.|++++.
T Consensus       227 ygsp~k~~-----------T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~k  275 (419)
T KOG0663|consen  227 YGSPLKPY-----------TPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQK  275 (419)
T ss_pred             hcCCcccC-----------cceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcC
Confidence            88774332           233333344 33333   56899999999999999998875

>KOG0593|consensus

Probab=100.00  E-value=8e-36  Score=233.38  Aligned_cols=184  Identities=18%  Similarity=0.290  Sum_probs=138.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--chhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--KSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~~~~   91 (260)
                      .|+.+.++|+|+||.||+|++  +|+-||||.+.. .-     ++...++-.++|+..+++++|+|++ +.+..  ...+
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~E-se-----dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrkl   76 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVE-SE-----DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKL   76 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeecc-CC-----ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhccee
Confidence            477789999999999999997  599999998532 22     2333467789999999999999999 22211  1112


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      ..++||+...-+      ...++...+..++.|++.|+.|+|+++++||||||+||||+.++.+||||||+|+....+.+
T Consensus        77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd  156 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD  156 (396)
T ss_pred             EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence            224444433211      23478888999999999999999999999999999999999999999999999988775544


Q ss_pred             ccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      .-+|          .+++..+.+|+-+   ..|.+.+|||+.||++.|+++|.-
T Consensus       157 ~YTD----------YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~p  200 (396)
T KOG0593|consen  157 NYTD----------YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEP  200 (396)
T ss_pred             hhhh----------hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCc
Confidence            3332          2222333344433   457889999999999999999964

>KOG0597|consensus

Probab=100.00  E-value=3.1e-35  Score=246.77  Aligned_cols=221  Identities=18%  Similarity=0.264  Sum_probs=169.6

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC--
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ--   87 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~--   87 (260)
                      .|-+.+.||+|+||+||+|+.  +.+.||+|.+.+..-...+      .+.+.+|++++++++||||+     |....  
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~------l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~   76 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKE------LKNLRQEVRILRSLKHPNIVEMLESFETSAHL   76 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHH------HHHHHHHHHHHHhcCCcchhhHHHhhcccceE
Confidence            466789999999999999997  4789999986554322212      35688999999999999999     22222  


Q ss_pred             ----chhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          88 ----KSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        88 ----~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                          +.+.|+|+.+++...   .++++.+..++.|++.||.|||+++|+|||+||.|||++.++++|++|||+|+.....
T Consensus        77 ~vVte~a~g~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~  153 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN  153 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence                333388998887743   7999999999999999999999999999999999999999999999999999877553


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccC
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQN  235 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~  235 (260)
                      ..      .+    ..+-++..+++|+.+  +.++..+|+||+||++||+.+|.-|+-   ..++++.++....   ..-
T Consensus       154 t~------vl----tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~  223 (808)
T KOG0597|consen  154 TS------VL----TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTA  223 (808)
T ss_pred             ce------ee----eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccc
Confidence            21      11    112222223333333  678999999999999999999988887   4566666666432   223


Q ss_pred             CccHHHHHHHHHHhccccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...+..+++.|...++..|..
T Consensus       224 S~~f~nfl~gLL~kdP~~Rlt  244 (808)
T KOG0597|consen  224 SSSFVNFLQGLLIKDPAQRLT  244 (808)
T ss_pred             cHHHHHHHHHHhhcChhhccc
Confidence            456788888888888888753

>KOG0198|consensus

Probab=100.00  E-value=4.3e-34  Score=232.01  Aligned_cols=224  Identities=14%  Similarity=0.196  Sum_probs=157.3

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cch-h
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKS-A   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~-~   90 (260)
                      ....+.||+|+||.||++...  |...|||.+....  .+.      .+.+.+|+.++.+++||||+ +++.   ... .
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~--~~~------~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED--SPT------SESLEREIRILSRLNHPNIVQYYGSSSSRENDE   90 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeeccc--chh------HHHHHHHHHHHHhCCCCCEEeeCCccccccCee
Confidence            556789999999999999984  7999999865431  111      45689999999999999999 5553   221 2


Q ss_pred             hhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccc
Q psy7935          91 IQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~  162 (260)
                      +..++||+.++++       +..+++..+.+++.|+++||.|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            3445555554433       116899999999999999999999999999999999999999 79999999999976653


Q ss_pred             cccccccccccccceeeeeeeeeecCccccc-c--ccccceeEeecceeeeeccccccccH----HHHHHHHHhhc----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ-S--YNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSY----  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~----  231 (260)
                      .....       .......++..+++|+... .  ..+++|+||+||+++||+||..|+.-    .+.+-.+....    
T Consensus       171 ~~~~~-------~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~  243 (313)
T KOG0198|consen  171 KGTKS-------DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPE  243 (313)
T ss_pred             ccccc-------cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCC
Confidence            11000       0011223334445555554 2  33589999999999999999777653    22222222111    


Q ss_pred             -cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 -RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 -~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       +..-+....+++.+|...++..|..
T Consensus       244 ip~~ls~~a~~Fl~~C~~~~p~~Rpt  269 (313)
T KOG0198|consen  244 IPDSLSDEAKDFLRKCFKRDPEKRPT  269 (313)
T ss_pred             CCcccCHHHHHHHHHHhhcCcccCcC
Confidence             2222345677777777777777753

>KOG0583|consensus

Probab=100.00  E-value=1.1e-34  Score=243.84  Aligned_cols=232  Identities=18%  Similarity=0.160  Sum_probs=167.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~   84 (260)
                      ...+.|.+.+.||+|+||.|+.|.+  +|..||+|++..+......   ....+.+.+|+.++++++ ||||+     +.
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~---~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~   90 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS---QKLDELIKREISILRRLRSHPNIIRLLEVFA   90 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc---cccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence            4456789999999999999999998  5899999965543221111   012345678999999999 99999     22


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-CcEEEEeecc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFGL  156 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-~~~kl~DFg~  156 (260)
                      .....++       |+|++++...   ..+.+..+..++.|++.|++|||++||+||||||+|||++.+ +.+||+|||+
T Consensus        91 t~~~~~ivmEy~~gGdL~~~i~~~---g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~  167 (370)
T KOG0583|consen   91 TPTKIYIVMEYCSGGDLFDYIVNK---GRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGL  167 (370)
T ss_pred             cCCeEEEEEEecCCccHHHHHHHc---CCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccc
Confidence            2222222       5777776653   368889999999999999999999999999999999999998 9999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc---HHHHHHHHHhh---
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS---  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~---  230 (260)
                      +........      .+....++..+.+|++......+-..++|+||+|++++-|++|..|++   ...+...+..+   
T Consensus       168 s~~~~~~~~------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~  241 (370)
T KOG0583|consen  168 SAISPGEDG------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK  241 (370)
T ss_pred             ccccCCCCC------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc
Confidence            987641110      011111222222222221211244688999999999999999999998   44455555554   


Q ss_pred             ccccC-CccHHHHHHHHHHhccccccc
Q psy7935         231 YRRQN-RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~~~~-~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++... .+++..++.+|...++..|..
T Consensus       242 ~p~~~~S~~~~~Li~~mL~~~P~~R~t  268 (370)
T KOG0583|consen  242 IPSYLLSPEARSLIEKMLVPDPSTRIT  268 (370)
T ss_pred             CCCCcCCHHHHHHHHHHcCCCcccCCC
Confidence            34444 677799999999999888764

>KOG0658|consensus

Probab=100.00  E-value=6.5e-35  Score=233.69  Aligned_cols=176  Identities=16%  Similarity=0.254  Sum_probs=136.7

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC---
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ---   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~---   87 (260)
                      +...+.+|.|+||.||+|..  ++++||||......            +--.+|+++++.+.||||+     |....   
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d   93 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESD   93 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCc
Confidence            67789999999999999998  47899999854322            2235789999999999999     33322   


Q ss_pred             chhhhhHHHhhccCc---------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeeccc
Q psy7935          88 KSAIQTLISNLDSQN---------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~---------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~  157 (260)
                      ..++..++||+....         ..+.++.-.++-++.|+.+||.|||+.||+||||||.|+|+|. .|.+||||||.|
T Consensus        94 ~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   94 EVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             hhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence            235555666654311         1345777778889999999999999999999999999999998 599999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      +.....+...           +..+..++.+|+-+   ..|+.+.|+||.||++.|++-|+.
T Consensus       174 K~L~~~epni-----------SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p  224 (364)
T KOG0658|consen  174 KVLVKGEPNI-----------SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP  224 (364)
T ss_pred             eeeccCCCce-----------eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence            8876655331           33445555555544   569999999999999999998864

>KOG0578|consensus

Probab=100.00  E-value=6.2e-35  Score=245.14  Aligned_cols=225  Identities=16%  Similarity=0.247  Sum_probs=171.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--   87 (260)
                      .+..+|+..++||+|+.|.||.++.  +++.||||++..+.        +..++-+.+|+.+++..+|+||+ |++..  
T Consensus       270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--------Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv  341 (550)
T KOG0578|consen  270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--------QPKKELLLNEILVMRDLHHPNIVNFLDSYLV  341 (550)
T ss_pred             ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--------CCchhhhHHHHHHHHhccchHHHHHHHHhcc
Confidence            3456688899999999999999997  58899999976543        22356789999999999999999 44432  


Q ss_pred             chhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          88 KSAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..-++.+|||++++.+     ...+++.++..++.++++||+|||.+||+|||||.+|||++.+|.+||+|||++.....
T Consensus       342 ~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~  421 (550)
T KOG0578|consen  342 GDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE  421 (550)
T ss_pred             cceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence            2335668999988776     34588999999999999999999999999999999999999999999999999987766


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHHHHHHHHHh----h-----c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILS----S-----Y  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~----~-----~  231 (260)
                      ...++          .+++++.||++|+..  ..|.+++||||||++.+||+.|.-|+-.+.-+.++.-    +     .
T Consensus       422 ~~~KR----------~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~  491 (550)
T KOG0578|consen  422 EQSKR----------STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKN  491 (550)
T ss_pred             ccCcc----------ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCC
Confidence            65443          234455555566655  6699999999999999999999766542222222211    1     1


Q ss_pred             cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +..-.+.+.++|.+|..++...|.
T Consensus       492 ~~klS~~~kdFL~~cL~~dv~~Ra  515 (550)
T KOG0578|consen  492 PEKLSPELKDFLDRCLVVDVEQRA  515 (550)
T ss_pred             ccccCHHHHHHHHHHhhcchhcCC
Confidence            222245667777777777666553

>KOG0661|consensus

Probab=100.00  E-value=1.2e-35  Score=244.53  Aligned_cols=181  Identities=18%  Similarity=0.189  Sum_probs=141.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~----~~~~~   87 (260)
                      .++|.++++||.|+||.||+|+.  .|..||||....+.+...       .-.-++|+..|++++ ||||+    .+-.+
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e-------e~~nLREvksL~kln~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE-------ECMNLREVKSLRKLNPHPNIIKLKEVIRDN   81 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH-------HHHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence            45789999999999999999997  589999998655544321       234578999999998 99999    22223


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...++.++||++.+..      .+.++++.+..|+.||++||+|+|.+|+.|||+||+|||+.....+||+|||+|+...
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc
Confidence            3255556666655322      6789999999999999999999999999999999999999988999999999998776


Q ss_pred             cccc----ccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccc
Q psy7935         162 STED----KAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       162 ~~~~----~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      +...    ..|.+|++++.+.            .-+.|+.+.|||++||+++|+.+-
T Consensus       162 SkpPYTeYVSTRWYRAPEvLL------------rs~~Ys~pvD~wA~GcI~aEl~sL  206 (538)
T KOG0661|consen  162 SKPPYTEYVSTRWYRAPEVLL------------RSGYYSSPVDMWAVGCIMAELYSL  206 (538)
T ss_pred             cCCCcchhhhcccccchHHhh------------hccccCCchHHHHHHHHHHHHHHh
Confidence            5432    1333444443333            226799999999999999997654

>KOG0659|consensus

Probab=100.00  E-value=1.9e-34  Score=221.81  Aligned_cols=182  Identities=21%  Similarity=0.231  Sum_probs=139.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--chh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--KSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~~~   90 (260)
                      ++|...+.+|+|.||.||+|++  +|+.||||.+......+.-      .....+|++.++.++|+||+ +.|..  ...
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi------~~talREIK~Lqel~h~nIi~LiD~F~~~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI------NRTALREIKLLQELKHPNIIELIDVFPHKSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc------cHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence            3567789999999999999998  5999999998776544221      24578999999999999999 44432  112


Q ss_pred             hhhHHHhh--------ccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 IQTLISNL--------DSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~~~l~~~l--------~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      +..++||+        ...  ...+++..+..++.+++.|++|||++.|+||||||.|+||+.+|.+||+|||+++.+.+
T Consensus        76 l~lVfEfm~tdLe~vIkd~--~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~  153 (318)
T KOG0659|consen   76 LSLVFEFMPTDLEVVIKDK--NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGS  153 (318)
T ss_pred             eEEEEEeccccHHHHhccc--ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence            22244443        333  45799999999999999999999999999999999999999999999999999998876


Q ss_pred             cccccccccccccceeeeeeeeeecCccc---cccccccceeEeecceeeeecccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGT---LQSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      +....+.          -+.+..+.+|+-   ...|...+||||.||++.|++.+.
T Consensus       154 p~~~~~~----------~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~  199 (318)
T KOG0659|consen  154 PNRIQTH----------QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRV  199 (318)
T ss_pred             CCccccc----------ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccC
Confidence            6543211          022222333332   256888999999999999988764

>KOG0611|consensus

Probab=100.00  E-value=8.8e-35  Score=235.84  Aligned_cols=224  Identities=17%  Similarity=0.193  Sum_probs=177.2

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ...+|++.+.||.|+||.|-+++.  .|+.||||.+.+..     +.+......+.+|+++++.++||||+ +++.    
T Consensus        51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk-----IkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENk  125 (668)
T KOG0611|consen   51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK-----IKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENK  125 (668)
T ss_pred             hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh-----cccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCC
Confidence            345689999999999999999997  49999999865443     34444567799999999999999999 3332    


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ..-.+       |.|++|+..+.   .+++.++.++++||..|+-|+|.++++|||||.+|||+|.++++||+|||++..
T Consensus       126 dKIvivMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNl  202 (668)
T KOG0611|consen  126 DKIVIVMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNL  202 (668)
T ss_pred             ceEEEEEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhh
Confidence            22222       99999998865   799999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      +...+           .+.++++...+.+|+-.   .+-.|.+|-||+|+.+|-++-|.+|++   ...++.++-.+-. 
T Consensus       203 y~~~k-----------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr  271 (668)
T KOG0611|consen  203 YADKK-----------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR  271 (668)
T ss_pred             hcccc-----------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc
Confidence            65443           22233333333344433   345688999999999999999999998   6778888877643 


Q ss_pred             -ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 -RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ...+.+..-++..|..+++..|.+
T Consensus       272 EP~~PSdA~gLIRwmLmVNP~RRAT  296 (668)
T KOG0611|consen  272 EPETPSDASGLIRWMLMVNPERRAT  296 (668)
T ss_pred             CCCCCchHHHHHHHHHhcCcccchh
Confidence             334577788899999888876643

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-34  Score=234.63  Aligned_cols=221  Identities=17%  Similarity=0.142  Sum_probs=162.2

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~   89 (260)
                      .|++.+.||+|+||.||+|.+.  |+.||+|++....     .......+.+.+|++++++++||||+ ++    +....
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   76 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE-----VIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFL   76 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-----HhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeE
Confidence            4677899999999999999984  8899999864322     11112245688999999999999999 22    22221


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          77 YMLMEYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             EEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            12       4555555433   2578888889999999999999999999999999999999999999999999875532


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~  234 (260)
                      ...             ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..+.+..+.   +..
T Consensus       154 ~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  220 (291)
T cd05612         154 RTW-------------TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRH  220 (291)
T ss_pred             Ccc-------------cccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCcc
Confidence            211             01111122233322  346788999999999999999998876   445555555432   233


Q ss_pred             CCccHHHHHHHHHHhccccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKRCM  258 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~~~  258 (260)
                      .++.+.+++++|.+.++..|..++
T Consensus       221 ~~~~~~~li~~~l~~dp~~R~~~~  244 (291)
T cd05612         221 LDLYAKDLIKKLLVVDRTRRLGNM  244 (291)
T ss_pred             CCHHHHHHHHHHcCCCHHHccCCc
Confidence            456789999999999999998654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0660|consensus

Probab=100.00  E-value=4.3e-34  Score=228.60  Aligned_cols=185  Identities=21%  Similarity=0.300  Sum_probs=139.5

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCCch-----
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQKS-----   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~-----   89 (260)
                      |..++.||.|+||.|+.+.+  +|+.||||.+. ..+     ......++..+|+..++.++|+||+ +.+....     
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~-~~F-----~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~   97 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKIL-NPF-----ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK   97 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhh-hhh-----hchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence            55589999999999999998  49999999853 222     3333467889999999999999999 3322111     


Q ss_pred             --hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 --AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 --~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                        -++.++++++....     ++.++...+..++.|+++||+|+|+.+|+||||||+|++++.++.+||+|||+|+....
T Consensus        98 f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen   98 FNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             cceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence              11333333322100     33589999999999999999999999999999999999999999999999999987754


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      . ...       ....+.+.+.++.+|+-+   ..++..+||||.||++.|+++|+-
T Consensus       178 ~-~~~-------~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkp  226 (359)
T KOG0660|consen  178 F-FED-------GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKP  226 (359)
T ss_pred             c-Ccc-------cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCC
Confidence            3 111       112334445555555544   679999999999999999999874

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.2e-33  Score=235.10  Aligned_cols=221  Identities=15%  Similarity=0.167  Sum_probs=163.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  ++.||+|++....     .......+.+.+|+.++++++||||+ +    .+...
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-----ILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence            45888999999999999999984  8899999865322     11222245688999999999999999 2    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  169 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP  169 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence            222       4455555432   357888888899999999999999999999999999999999999999999987553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      ....             +..+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..+.+..+.   +.
T Consensus       170 ~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~  236 (329)
T PTZ00263        170 DRTF-------------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN  236 (329)
T ss_pred             CCcc-------------eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC
Confidence            3211             11111223334433  446789999999999999999998875   445555555543   22


Q ss_pred             cCCccHHHHHHHHHHhcccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ..++.+.+++.+|...++..|..+
T Consensus       237 ~~~~~~~~li~~~L~~dP~~R~~~  260 (329)
T PTZ00263        237 WFDGRARDLVKGLLQTDHTKRLGT  260 (329)
T ss_pred             CCCHHHHHHHHHHhhcCHHHcCCC
Confidence            334667899999999999999764

>KOG1187|consensus

Probab=100.00  E-value=6.8e-34  Score=238.48  Aligned_cols=193  Identities=19%  Similarity=0.259  Sum_probs=144.9

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----E
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----L   83 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~   83 (260)
                      ++..++++|- ..+.||+|+||.||+|... |..||||++.......        ...|.+|++++.+++|||++    +
T Consensus        69 el~~AT~~Fs-~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~--------~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   69 ELRKATNNFS-ESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG--------EREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             HHHHHHhCCc-hhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc--------hhHHHHHHHHHhcCCCcCcccEEEE
Confidence            6777887754 4789999999999999986 5899999653322110        24499999999999999999    3


Q ss_pred             eC-CCc-hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC---CceecCCCCCcEEEccCCcEEE
Q psy7935          84 DD-VQK-SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN---NIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        84 ~~-~~~-~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~kl  151 (260)
                      +. ... ..+       |+|.+++.+.... .++|....+|+.++|.||+|||+.   .|+||||||+|||+|+++.+||
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence            33 332 333       7888888776523 789999999999999999999985   4999999999999999999999


Q ss_pred             Eeecccccccc-cccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         152 IDFGLSQIKVS-TEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       152 ~DFg~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +|||+|+..+. .....+..      .++..+.+|++...  +..+.++|+||||++++|+++|+.+.+
T Consensus       219 sDFGLa~~~~~~~~~~~~~~------~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d  279 (361)
T KOG1187|consen  219 SDFGLAKLGPEGDTSVSTTV------MGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVD  279 (361)
T ss_pred             cCccCcccCCccccceeeec------CCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccC
Confidence            99999965543 21111000      22233333332211  568899999999999999999986544

>KOG0588|consensus

Probab=100.00  E-value=1.2e-33  Score=240.88  Aligned_cols=219  Identities=14%  Similarity=0.156  Sum_probs=174.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      ..+.+.||.|+.|.|..|++  +|+.+|||++.... ..++    .....+.+|+-+++-++|||++     |.+....+
T Consensus        14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~-~~s~----s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS-ELSS----SQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             eeccccccCCCCceehhhhcccccceeEEEeecccc-cccc----ccccchhhhhHHHHHhcCCCeeeeeeeeccCceEE
Confidence            56789999999999999998  69999999876542 2111    1246789999999999999999     33333433


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       |.|++|+-.+.   .+++.++.+++.||+.|+.|+|..+|+||||||+|+|+|..+.+||+|||+|..-...
T Consensus        89 lvlEyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             EEEEecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            3       77777765543   6888888999999999999999999999999999999999889999999999764333


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      .            +...-+|.|-+ +|+..   .+...++|+||+|++++.++||+.|++   .+.++.++.+|.   |.
T Consensus       166 k------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs  233 (786)
T KOG0588|consen  166 K------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS  233 (786)
T ss_pred             c------------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC
Confidence            2            12223333333 33333   456788999999999999999999999   778888887774   56


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +-++++.+++.+|.++++..|.+
T Consensus       234 ~Is~eaQdLLr~ml~VDp~~RiT  256 (786)
T KOG0588|consen  234 NISSEAQDLLRRMLDVDPSTRIT  256 (786)
T ss_pred             cCCHHHHHHHHHHhccCcccccc
Confidence            77899999999999999998875

>KOG4721|consensus

Probab=100.00  E-value=2.7e-34  Score=241.40  Aligned_cols=211  Identities=19%  Similarity=0.279  Sum_probs=164.5

Q ss_pred             eccccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      .|+.+=+-...++.||.|+.|.||+|+..++.||||.+               ++.-..+|+.|++++||||+ |.+.  
T Consensus       118 ~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV---------------~elkETdIKHLRkLkH~NII~FkGVCt  182 (904)
T KOG4721|consen  118 LWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKV---------------RELKETDIKHLRKLKHPNIITFKGVCT  182 (904)
T ss_pred             hccCCHHHhhhhhhhccCcccceeeeeccCceehhHHH---------------hhhhhhhHHHHHhccCcceeeEeeeec
Confidence            34444444566889999999999999999999999973               23345788999999999999 5543  


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...+...+|||+..+.+      ++.+++..+..|.++|+.|++|||.+.|||||||.-||||..+..+||+|||-++-.
T Consensus       183 qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~  262 (904)
T KOG4721|consen  183 QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL  262 (904)
T ss_pred             CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence            23344557777766554      557899999999999999999999999999999999999999999999999988755


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc---------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA---------------------  217 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~---------------------  217 (260)
                      ....+   ..        .+.++--|++|+..  .+.+.|+||||||+++|||+|+..|                     
T Consensus       263 ~~~ST---kM--------SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lp  331 (904)
T KOG4721|consen  263 SDKST---KM--------SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLP  331 (904)
T ss_pred             hhhhh---hh--------hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCccccc
Confidence            43321   11        22233334555555  6688999999999999999999865                     


Q ss_pred             ------ccHHHHHHHHHhhccccCCccHHHHHHHHH
Q psy7935         218 ------VDFRDMFNWILSSYRRQNRKQFETVMKTFA  247 (260)
Q Consensus       218 ------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~  247 (260)
                            .-+.-++.+||...+.. ||+|..++..++
T Consensus       332 vPstcP~GfklL~Kqcw~sKpRN-RPSFrqil~Hld  366 (904)
T KOG4721|consen  332 VPSTCPDGFKLLLKQCWNSKPRN-RPSFRQILLHLD  366 (904)
T ss_pred             CcccCchHHHHHHHHHHhcCCCC-CccHHHHHHHHh
Confidence                  22667889999966665 789988888775

>KOG0694|consensus

Probab=100.00  E-value=2.6e-33  Score=240.00  Aligned_cols=228  Identities=17%  Similarity=0.191  Sum_probs=179.7

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~   88 (260)
                      .+.|..++.||+|+||.|+++..  +++.+|||++++...-..+     .-+..+.|..++.-. +||.++ ++..  ..
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d-----~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRD-----EVESLMCEKRIFELANRHPFLVNLFSCFQTK  441 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccc-----cHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence            34588899999999999999998  4889999997665432222     234566677776666 599998 2222  23


Q ss_pred             hhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          89 SAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ..++.+|||+.++..     ...+++..+..++..++.||+|||++||+|||||.+|||+|.+|++||+|||+++..-..
T Consensus       442 ~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             CeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence            334568888887654     356999999999999999999999999999999999999999999999999999754322


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccC
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQN  235 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~  235 (260)
                      .          ....+++++..+.+|+.+  ..|+..+|.||||+.+|+|+.|.-|+.   -+++++.++...   |..-
T Consensus       522 g----------~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~l  591 (694)
T KOG0694|consen  522 G----------DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL  591 (694)
T ss_pred             C----------CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc
Confidence            1          123456666667777776  669999999999999999999999887   678888888754   4444


Q ss_pred             CccHHHHHHHHHHhcccccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +.+..+++++|...++..|..+
T Consensus       592 s~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  592 SKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             cHHHHHHHHHHhccCcccccCC
Confidence            5677899999999999988876

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1e-32  Score=230.50  Aligned_cols=218  Identities=16%  Similarity=0.220  Sum_probs=156.2

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhhhhH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAIQTL   94 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~~~l   94 (260)
                      +.||+|+||.||+|++  +|+.||+|++.....     ........+.+|+.++++++||||+     +.+...  ++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~--~~lv   73 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI-----IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDR--LCFV   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCE--EEEE
Confidence            4689999999999998  488999998653221     1122235678899999999999998     222222  2234


Q ss_pred             HHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          95 ISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        95 ~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      ++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++........  
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--  151 (323)
T cd05571          74 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--  151 (323)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--
Confidence            444433322      235788899999999999999999999999999999999999999999999998643221111  


Q ss_pred             cccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHH
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFE  240 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~  240 (260)
                              .....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   .......+..+.   +....+.+.
T Consensus       152 --------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  223 (323)
T cd05571         152 --------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAK  223 (323)
T ss_pred             --------ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHH
Confidence                    0111222233344433  457889999999999999999998875   444455544432   233456788


Q ss_pred             HHHHHHHHhccccccc
Q psy7935         241 TVMKTFAEVELRGRKR  256 (260)
Q Consensus       241 ~il~~l~~~~~~~r~~  256 (260)
                      +++++|...++..|..
T Consensus       224 ~li~~~L~~dP~~R~~  239 (323)
T cd05571         224 SLLAGLLKKDPKQRLG  239 (323)
T ss_pred             HHHHHHccCCHHHcCC
Confidence            9999999999988873

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=5.7e-33  Score=233.41  Aligned_cols=222  Identities=16%  Similarity=0.123  Sum_probs=162.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----D   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~   85 (260)
                      ..+.|++.+.||+|+||.||+|.+.   +..||+|.+.....     ........+.+|+.++..++||||+ ++    +
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~  102 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-----IKQKQVDHVFSERKILNYINHPFCVNLYGSFKD  102 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-----hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe
Confidence            3455888999999999999999863   35799998643221     1112245688999999999999999 22    2


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       103 ~~~~~lv~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~  179 (340)
T PTZ00426        103 ESYLYLVLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAK  179 (340)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCe
Confidence            222222       4455555432   358889999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc--
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY--  231 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~--  231 (260)
                      .......             +..+...+.+|+..  ..++.++|+||+|++++++++|..|+.   .....+.+..+.  
T Consensus       180 ~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~  246 (340)
T PTZ00426        180 VVDTRTY-------------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY  246 (340)
T ss_pred             ecCCCcc-------------eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC
Confidence            6532210             11112223334433  346789999999999999999999876   344455555543  


Q ss_pred             -cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 -RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 -~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       +...++.+.+++++|...++..|+.
T Consensus       247 ~p~~~~~~~~~li~~~l~~dp~~R~~  272 (340)
T PTZ00426        247 FPKFLDNNCKHLMKKLLSHDLTKRYG  272 (340)
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHcCC
Confidence             3444667889999999999988864

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=5.8e-33  Score=228.09  Aligned_cols=222  Identities=12%  Similarity=0.130  Sum_probs=157.9

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~   90 (260)
                      |+..+.||+|+||.||+|.+  +|+.||+|.+......     .......+.+|+.++.+++|++++ +    .+....+
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh-----hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEE
Confidence            56689999999999999997  4899999986543221     111234678899999999999999 2    2222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|||++......
T Consensus        77 lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             EEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            2       44544443221 234788899999999999999999999999999999999999999999999998764322


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHh---hc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILS---SY  231 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~---~~  231 (260)
                      ....           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+..       ..+...+..   .+
T Consensus       156 ~~~~-----------~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
T cd05631         156 ETVR-----------GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEY  224 (285)
T ss_pred             Ceec-----------CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccC
Confidence            1110           11112223334333  4578899999999999999999988752       222222221   12


Q ss_pred             cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +...++.+.+++.+|...++..|..
T Consensus       225 ~~~~s~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05631         225 SEKFSEDAKSICRMLLTKNPKERLG  249 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHhcC
Confidence            3344667889999999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-32  Score=231.55  Aligned_cols=231  Identities=14%  Similarity=0.163  Sum_probs=159.3

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|++.+.||+|+||.||+|++.  |+.||+|++......     .......+.+|++++..++|+||+     +.+....
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   76 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMI-----KRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHL   76 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHh-----hccHHHHHHHHHHHHHhcCCCCccchhhheecCCeE
Confidence            4778899999999999999985  899999986543211     112245688899999999999999     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          77 YLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            22       3444444432   3588899999999999999999999999999999999999999999999999876544


Q ss_pred             cccccccccc-------------------cccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--
Q psy7935         163 TEDKAVDLYV-------------------LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--  219 (260)
Q Consensus       163 ~~~~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--  219 (260)
                      ..........                   .........+...+.+|+..  ..++.++|+||+|++++++++|..|+.  
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~  233 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence            3210000000                   00001111122223344433  457889999999999999999999876  


Q ss_pred             -HHHHHHHHHh-----hccccC--CccHHHHHHHHHHhccccccc
Q psy7935         220 -FRDMFNWILS-----SYRRQN--RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       220 -~~~~~~~~~~-----~~~~~~--~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+....+..     ..+...  ++.+.+++.+|.. ++..|..
T Consensus       234 ~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~  277 (350)
T cd05573         234 TLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLG  277 (350)
T ss_pred             CHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCC
Confidence             3334444433     122222  5667888888886 7777765

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0605|consensus

Probab=100.00  E-value=4.6e-33  Score=232.48  Aligned_cols=237  Identities=14%  Similarity=0.127  Sum_probs=176.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--EeCCC-c
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--LDDVQ-K   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~~~-~   88 (260)
                      ..+.|++++.||+|+||.||+|+-  +|.-+|+|++.+..     ......-+.+..|-.+|.....|.++  ++.++ .
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~-----M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~  213 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE-----MLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK  213 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHH-----HHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence            456799999999999999999986  69999999865433     33333346788899999999999999  33332 2


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..++.+|||+.++..      ...+++.+++.++.+++.|++-||+.|++||||||+|+|||..|++||+|||+++....
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~  293 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK  293 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence            234557777777654      34699999999999999999999999999999999999999999999999999964422


Q ss_pred             cc----------------c-cccc------c------------cc--cccceeeeeeeeeecCcccc--ccccccceeEe
Q psy7935         163 TE----------------D-KAVD------L------------YV--LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMID  203 (260)
Q Consensus       163 ~~----------------~-~~~d------~------------~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s  203 (260)
                      ..                . ...+      .            |.  -....+.+++++.+.+|+++  ..+....|.||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS  373 (550)
T KOG0605|consen  294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS  373 (550)
T ss_pred             hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence            10                0 0000      0            10  01123456777778888877  55889999999


Q ss_pred             ecceeeeecccccccc---HHHHHHHHHhhc-----c--ccCCccHHHHHHHHHHhccccccc
Q psy7935         204 FGLSQIKVSTEDKAVD---FRDMFNWILSSY-----R--RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       204 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~--~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +||+++|++.|--|+.   +.+...+++..-     |  ...++.+.+++.+|.. ++..|..
T Consensus       374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG  435 (550)
T KOG0605|consen  374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG  435 (550)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence            9999999999988877   555555554421     1  2224667888888886 7777776

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.7e-33  Score=235.44  Aligned_cols=222  Identities=15%  Similarity=0.207  Sum_probs=151.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ..+.++|++.+.||+|+||.||+|.+.       ++.||+|++.... .      ......+.+|+.++..+ +||||+ 
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~------~~~~~~~~~E~~~l~~l~~h~niv~   75 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-T------ASEHKALMSELKILIHIGNHLNVVN   75 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-c------hHHHHHHHHHHHHHHHhccCcceee
Confidence            445677899999999999999999751       4689999854221 1      11235688999999999 899999 


Q ss_pred             EeC---CCchhh---------hhHHHhhccCcc-----------------------------------------------
Q psy7935          83 LDD---VQKSAI---------QTLISNLDSQNI-----------------------------------------------  103 (260)
Q Consensus        83 ~~~---~~~~~~---------~~l~~~l~~~~~-----------------------------------------------  103 (260)
                      +++   .....+         ++|.+++.....                                               
T Consensus        76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (338)
T cd05102          76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG  155 (338)
T ss_pred             EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence            333   111111         566666643210                                               


Q ss_pred             ------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccc
Q psy7935         104 ------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLY  171 (260)
Q Consensus       104 ------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~  171 (260)
                                  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..........   
T Consensus       156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~---  232 (338)
T cd05102         156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR---  232 (338)
T ss_pred             ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhc---
Confidence                        12367778888999999999999999999999999999999999999999999976532211100   


Q ss_pred             ccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---------------------------HH
Q psy7935         172 VLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------------------FR  221 (260)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------------------~~  221 (260)
                       .+..    .+...+.+|+..  ..++.++|+||||++++++++ |..|+.                           ..
T Consensus       233 -~~~~----~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  307 (338)
T cd05102         233 -KGSA----RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIY  307 (338)
T ss_pred             -ccCC----CCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHH
Confidence             0000    011112334433  457889999999999999986 655532                           33


Q ss_pred             HHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         222 DMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      +++.+|+...+.. ||++.++++.|+++
T Consensus       308 ~li~~cl~~dp~~-RPs~~el~~~l~~~  334 (338)
T cd05102         308 RIMLACWQGDPKE-RPTFSALVEILGDL  334 (338)
T ss_pred             HHHHHHccCChhh-CcCHHHHHHHHHHH
Confidence            4555666644444 46666666666654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0580|consensus

Probab=100.00  E-value=6.6e-34  Score=215.81  Aligned_cols=225  Identities=13%  Similarity=0.145  Sum_probs=178.5

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      +-++|++.+.||.|-||.||.|+.  ++--||+|++++..     +.......++.+|+++.+.++||||+     |++.
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq-----i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~   94 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ-----ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS   94 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH-----HHHhcchhhhhheeEeecccCCccHHhhhhheecc
Confidence            346699999999999999999998  47789999976544     34444467899999999999999999     6666


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       |.++..+..+. ...+++.....+..|++.|+.|+|.++|+||||||+|+|++.++..||+|||-+..
T Consensus        95 ~riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~  173 (281)
T KOG0580|consen   95 KRIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH  173 (281)
T ss_pred             ceeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence            55554       88888888655 55688888999999999999999999999999999999999999999999998865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHh---hc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS---SY  231 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~---~~  231 (260)
                      .+...  +          .+++++..+.+|+..  ...+..+|+|++|+..+|++.|..|++   ..+..+++.+   .+
T Consensus       174 ~p~~k--R----------~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~  241 (281)
T KOG0580|consen  174 APSNK--R----------KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF  241 (281)
T ss_pred             cCCCC--c----------eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC
Confidence            54221  1          133444444444444  557888999999999999999999988   3444444443   34


Q ss_pred             cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +..-...+.+++.+|...++..|..
T Consensus       242 p~~is~~a~dlI~~ll~~~p~~r~~  266 (281)
T KOG0580|consen  242 PSTISGGAADLISRLLVKNPIERLA  266 (281)
T ss_pred             CcccChhHHHHHHHHhccCcccccc
Confidence            5666788899999999998888863

>KOG0594|consensus

Probab=100.00  E-value=4.4e-33  Score=223.08  Aligned_cols=185  Identities=21%  Similarity=0.260  Sum_probs=137.4

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCC-eE-----EeCCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD-IC-----LDDVQ   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~-----~~~~~   87 (260)
                      ..|+.++.||+|+||.||+|+.  +|+-||+|.+....-.      .-......+|+.+++.++|+| |+     ++..+
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc
Confidence            3477788999999999999998  4899999997654321      001345789999999999999 88     22222


Q ss_pred             c----hhh--------hhHHHhhccCccc-ccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          88 K----SAI--------QTLISNLDSQNIT-RENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        88 ~----~~~--------~~l~~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                      .    ..+        .+|..|+...... ..++...++.++.|++.||+|||+++|+||||||.||||+.+|.+||+||
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDF  164 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADF  164 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeecc
Confidence            1    011        6666666554321 35677899999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      |+|+...-+...          +..-+++..+.+|+.+   ..+++..||||+||++.||.+++-
T Consensus       165 GlAra~~ip~~~----------yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~  219 (323)
T KOG0594|consen  165 GLARAFSIPMRT----------YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRP  219 (323)
T ss_pred             chHHHhcCCccc----------ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCC
Confidence            999865433221          1111122223444444   458999999999999999998753

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=9.2e-33  Score=231.24  Aligned_cols=217  Identities=16%  Similarity=0.213  Sum_probs=155.6

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhhhhH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAIQTL   94 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~~~l   94 (260)
                      +.||+|+||.||++++  +|+.||+|++.....     ........+.+|+.+++.++||||+     +.+...  ++.+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~--~~lv   73 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-----IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDR--LCFV   73 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCE--EEEE
Confidence            3689999999999998  488999998654321     1112245678899999999999998     222222  2334


Q ss_pred             HHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          95 ISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        95 ~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      ++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......... 
T Consensus        74 ~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~-  152 (328)
T cd05593          74 MEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM-  152 (328)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccc-
Confidence            555544332      2357888999999999999999999999999999999999999999999999986532211110 


Q ss_pred             cccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHH
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFE  240 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~  240 (260)
                               ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..+.+..+.   +...++.+.
T Consensus       153 ---------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  223 (328)
T cd05593         153 ---------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAK  223 (328)
T ss_pred             ---------ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHH
Confidence                     011122223344433  457889999999999999999999875   344444444322   334456788


Q ss_pred             HHHHHHHHhcccccc
Q psy7935         241 TVMKTFAEVELRGRK  255 (260)
Q Consensus       241 ~il~~l~~~~~~~r~  255 (260)
                      +++++|...++..|.
T Consensus       224 ~li~~~L~~dP~~R~  238 (328)
T cd05593         224 SLLSGLLIKDPNKRL  238 (328)
T ss_pred             HHHHHHcCCCHHHcC
Confidence            899999888888886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2.7e-32  Score=228.16  Aligned_cols=219  Identities=17%  Similarity=0.219  Sum_probs=154.7

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--CchhhhhHHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQTLIS   96 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~~l~~   96 (260)
                      +.||+|+||.||++++  +|+.||+|++.....     ........+.+|+.++..++||||+ +.+.  ....++.+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI-----VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEe
Confidence            4689999999999997  488999998654321     1112235677899999999999998 2211  1122233444


Q ss_pred             hhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          97 NLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        97 ~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      |+.+..+      ...+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||++..........  
T Consensus        76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--  153 (325)
T cd05594          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--  153 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc--
Confidence            4443322      2358889999999999999999997 799999999999999999999999999986432211110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+..+.   +...++.+.+
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~  225 (325)
T cd05594         154 --------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKS  225 (325)
T ss_pred             --------ccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence                    011112223334333  457889999999999999999998875   344444443322   3344677899


Q ss_pred             HHHHHHHhcccccc
Q psy7935         242 VMKTFAEVELRGRK  255 (260)
Q Consensus       242 il~~l~~~~~~~r~  255 (260)
                      ++++|...++..|.
T Consensus       226 li~~~L~~dP~~R~  239 (325)
T cd05594         226 LLSGLLKKDPKQRL  239 (325)
T ss_pred             HHHHHhhcCHHHhC
Confidence            99999999999886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0589|consensus

Probab=100.00  E-value=2.7e-33  Score=233.23  Aligned_cols=223  Identities=17%  Similarity=0.228  Sum_probs=171.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|..++++|+|+||.++.++++  ++.+|+|.+.......+.      +....+|+.++++++||||+     |++...
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~------r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE------RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh------hHHHHHHHHHHHhccCCCeeeeccchhcCCc
Confidence            45788999999999999999884  789999998776654433      45788999999999999999     333333


Q ss_pred             hhhhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 SAIQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                       .++.+++|++++..        +..++++.++.|+.|++.|++|||+++|+|||||+.||+++.++.++|+|||+|+..
T Consensus        78 -~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   78 -LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKIL  156 (426)
T ss_pred             -eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhc
Confidence             23335555555433        456999999999999999999999999999999999999999999999999999988


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc----
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY----  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~----  231 (260)
                      .+....+          .+.+++.++..|+-+  .+|..|+||||+||.++|+.+-+.++.   +..++.++..+.    
T Consensus       157 ~~~~~~a----------~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl  226 (426)
T KOG0589|consen  157 NPEDSLA----------STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL  226 (426)
T ss_pred             CCchhhh----------heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC
Confidence            7765222          133444455566655  568999999999999999999877666   566666666554    


Q ss_pred             cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +...+.++..+++.+...+++.|.
T Consensus       227 p~~ys~el~~lv~~~l~~~P~~RP  250 (426)
T KOG0589|consen  227 PSMYSSELRSLVKSMLRKNPEHRP  250 (426)
T ss_pred             CccccHHHHHHHHHHhhcCCccCC
Confidence            344456667777777777766664

>KOG0033|consensus

Probab=100.00  E-value=5.2e-35  Score=222.83  Aligned_cols=224  Identities=17%  Similarity=0.135  Sum_probs=179.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|++-+.||+|+|+.||++.+  +|+++|+|++..+.++..+      .+.+.+|+.+.+.++||||+ +.+.  ...+
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~------~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~   84 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREARICRKLQHPNIVRLHDSIQEESF   84 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcccc------HHHHHHHHHHHHhcCCCcEeehhhhhcccce
Confidence            4578889999999999999987  5999999998887776553      46789999999999999999 4443  2333


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeeccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQIKV  161 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~~~~  161 (260)
                      .+.++|++.++.+      ....++..+...+.||+++|.|+|+++|+|||+||+|+|+-+   ...+||+|||++....
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence            4556666666554      224788899999999999999999999999999999999976   5679999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccccC-
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQN-  235 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-  235 (260)
                      +..           ...+..+++.+++|+.+  .+++..+|||+.|++++-++.|..|+.   -..+++++..+..... 
T Consensus       165 ~g~-----------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~  233 (355)
T KOG0033|consen  165 DGE-----------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS  233 (355)
T ss_pred             Ccc-----------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC
Confidence            322           22344455556677666  668899999999999999999999987   5788899988754333 


Q ss_pred             ------CccHHHHHHHHHHhccccccc
Q psy7935         236 ------RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       236 ------~~~~~~il~~l~~~~~~~r~~  256 (260)
                            .++..+++.+|..+++..|.+
T Consensus       234 ~~w~~is~~Ak~LvrrML~~dP~kRIt  260 (355)
T KOG0033|consen  234 PEWDTVTPEAKSLIRRMLTVNPKKRIT  260 (355)
T ss_pred             cccCcCCHHHHHHHHHHhccChhhhcc
Confidence                  466689999999999988864

>KOG0599|consensus

Probab=100.00  E-value=5.3e-33  Score=215.03  Aligned_cols=230  Identities=16%  Similarity=0.184  Sum_probs=171.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC---Cchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV---QKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~---~~~~   90 (260)
                      |+.-+.+|+|..+.|.++.+  +|+++|+|++....-+.....-..-+++-..|+.+++++ -||+|+ +.|.   ....
T Consensus        19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~   98 (411)
T KOG0599|consen   19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFV   98 (411)
T ss_pred             cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchh
Confidence            56788999999999999987  489999999876544433322333456778899999998 599999 4433   2222


Q ss_pred             h--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 I--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      +        |.|+||+...-   .++++...+|++|+.+|+.|||.++|+||||||+|||++.+.++||+|||+++....
T Consensus        99 FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~  175 (411)
T KOG0599|consen   99 FLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP  175 (411)
T ss_pred             hhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence            2        88888887754   699999999999999999999999999999999999999999999999999988776


Q ss_pred             cccc----cccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccH-HH--HHHHHHhhccccC
Q psy7935         163 TEDK----AVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDF-RD--MFNWILSSYRRQN  235 (260)
Q Consensus       163 ~~~~----~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~  235 (260)
                      .+.-    ++..|-+++.+-+-      | -+.-..|+..+|+|++|++++-++.|.-|+.- ++  ++..+++|...+.
T Consensus       176 GekLrelCGTPgYLAPEtikC~------m-~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~  248 (411)
T KOG0599|consen  176 GEKLRELCGTPGYLAPETIKCS------M-YENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR  248 (411)
T ss_pred             chhHHHhcCCCcccChhheeee------c-ccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC
Confidence            6422    12222222222210      0 11113578899999999999999999888872 22  2345556655665


Q ss_pred             CccH-------HHHHHHHHHhcccccccc
Q psy7935         236 RKQF-------ETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       236 ~~~~-------~~il~~l~~~~~~~r~~~  257 (260)
                      ++.|       .+++.+|..+++..|.++
T Consensus       249 speWadis~~~KdLIsrlLqVdp~~Rita  277 (411)
T KOG0599|consen  249 SPEWADISATVKDLISRLLQVDPTKRITA  277 (411)
T ss_pred             CcchhhccccHHHHHHHHHeeCchhcccH
Confidence            5555       677888888888888764

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=3.3e-32  Score=231.06  Aligned_cols=231  Identities=13%  Similarity=0.138  Sum_probs=156.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|++.+.||+|+||.||+|++  +|+.||||++.....     ........+.+|+.++..++||||+     +.+....
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~   76 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM-----LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYL   76 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeE
Confidence            477899999999999999998  488999998653221     1112245678899999999999999     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        77 ~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  153 (364)
T cd05599          77 YLIMEYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK  153 (364)
T ss_pred             EEEECCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence            22       5566655443   2588999999999999999999999999999999999999999999999999875432


Q ss_pred             ccccc--------------------------cccccccc--ceeeeeeeeeecCcccc--ccccccceeEeecceeeeec
Q psy7935         163 TEDKA--------------------------VDLYVLKR--NLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVS  212 (260)
Q Consensus       163 ~~~~~--------------------------~d~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~  212 (260)
                      .....                          ...|....  ..+...++..+.+|+..  ..++.++|+||+|+++++++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  233 (364)
T cd05599         154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML  233 (364)
T ss_pred             cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence            21000                          00000000  00111222223344433  45788999999999999999


Q ss_pred             ccccccc---HHHHHHHHHhhc-----cc--cCCccHHHHHHHHHHhccccccc
Q psy7935         213 TEDKAVD---FRDMFNWILSSY-----RR--QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       213 ~~~~~~~---~~~~~~~~~~~~-----~~--~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +|..|+.   ..+....+....     +.  ..++.+.+++++|.. ++..|..
T Consensus       234 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~  286 (364)
T cd05599         234 VGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLG  286 (364)
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCC
Confidence            9998876   334444443311     11  124566777777764 5555543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=5.8e-32  Score=230.60  Aligned_cols=232  Identities=13%  Similarity=0.159  Sum_probs=154.0

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .|++++.||+|+||.||++++  +++.||||++....     .........+.+|++++.+++||||+ +++.  ....+
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~   76 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE-----MFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYL   76 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-----HHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCee
Confidence            477889999999999999998  48899999864321     11122245688899999999999999 2221  12222


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~  156 (377)
T cd05629          77 YLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD  156 (377)
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            334444433322      23578888999999999999999999999999999999999999999999999864321110


Q ss_pred             c-----------cc-----------c-------------ccccccc--eeeeeeeeeecCcccc--ccccccceeEeecc
Q psy7935         166 K-----------AV-----------D-------------LYVLKRN--LTTIIVVAYCWSKGTL--QSYNHHLVMIDFGL  206 (260)
Q Consensus       166 ~-----------~~-----------d-------------~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~  206 (260)
                      .           ..           +             .|.....  .....+...+.+|+..  ..++.++|+||+|+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  236 (377)
T cd05629         157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA  236 (377)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence            0           00           0             0000000  0011222233444443  45788999999999


Q ss_pred             eeeeecccccccc---HHHHHHHHHhhc-----cc--cCCccHHHHHHHHHHhccccc
Q psy7935         207 SQIKVSTEDKAVD---FRDMFNWILSSY-----RR--QNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       207 ~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~--~~~~~~~~il~~l~~~~~~~r  254 (260)
                      +++++++|..|+.   ..+.+..+....     +.  ...+.+.+++.+|.. .+..|
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r  293 (377)
T cd05629         237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENR  293 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhc
Confidence            9999999998875   334444443211     11  124567788888875 55555

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.98  E-value=7.5e-32  Score=229.84  Aligned_cols=231  Identities=13%  Similarity=0.103  Sum_probs=154.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|++++.||+|+||.||+|++  +++.||+|++....     .........+.+|+++++.++|+||+     +.+....
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~   76 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD-----VLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNL   76 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH-----HHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEE
Confidence            478899999999999999998  48899999854321     11112245688899999999999998     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..+..
T Consensus        77 ~lv~E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~  153 (376)
T cd05598          77 YFVMDYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (376)
T ss_pred             EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence            22       4455554432   3578888899999999999999999999999999999999999999999999753321


Q ss_pred             ccc---------cccccccc-----------------------c-cceeeeeeeeeecCcccc--ccccccceeEeecce
Q psy7935         163 TED---------KAVDLYVL-----------------------K-RNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLS  207 (260)
Q Consensus       163 ~~~---------~~~d~~~~-----------------------~-~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~  207 (260)
                      ...         ...+....                       . .......+...+.+|+..  ..++.++|+||+|++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  233 (376)
T cd05598         154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  233 (376)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence            100         00000000                       0 000012223333444444  457889999999999


Q ss_pred             eeeecccccccc---HHHHHHHHHhhc-------cccCCccHHHHHHHHHHhccccccc
Q psy7935         208 QIKVSTEDKAVD---FRDMFNWILSSY-------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       208 ~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++++++|..|+.   ..+....+....       .....+.+.+++.+|. .++..|..
T Consensus       234 lyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~  291 (376)
T cd05598         234 LYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLG  291 (376)
T ss_pred             eeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCC
Confidence            999999999876   333333333211       1122456677777765 36666663

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=3.2e-32  Score=226.54  Aligned_cols=215  Identities=17%  Similarity=0.200  Sum_probs=154.4

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchhh-----
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSAI-----   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~~-----   91 (260)
                      ||+|+||.||+|++.  ++.||+|.+.....     ........+.+|+.++.+++||||+ +    .+....++     
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-----VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCC
Confidence            699999999999984  78999998643221     1122245678899999999999999 2    22222222     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                        ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.........  
T Consensus        76 ~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--  150 (312)
T cd05585          76 NGGELFHHLQRE---GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKT--  150 (312)
T ss_pred             CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcc--
Confidence              4555555432   257888899999999999999999999999999999999999999999999987532221110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.....+.+.   +...++.+.+
T Consensus       151 --------~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (312)
T cd05585         151 --------NTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKD  222 (312)
T ss_pred             --------ccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence                    011112222333333  457889999999999999999998875   455555555432   2334567788


Q ss_pred             HHHHHHHhccccccc
Q psy7935         242 VMKTFAEVELRGRKR  256 (260)
Q Consensus       242 il~~l~~~~~~~r~~  256 (260)
                      ++.+|...++..|..
T Consensus       223 li~~~L~~dp~~R~~  237 (312)
T cd05585         223 LLIGLLSRDPTRRLG  237 (312)
T ss_pred             HHHHHcCCCHHHcCC
Confidence            999999888888853

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.98  E-value=9.2e-33  Score=230.80  Aligned_cols=219  Identities=16%  Similarity=0.217  Sum_probs=155.4

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--CchhhhhHHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQTLIS   96 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~~l~~   96 (260)
                      +.||+|+||.||++++  +|..||+|++......     .......+.+|+.+++.++||||+ +.+.  ....++.+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-----AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-----hhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEe
Confidence            4689999999999998  4889999986543211     111235677899999999999998 2211  1112233445


Q ss_pred             hhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccc
Q psy7935          97 NLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL  170 (260)
Q Consensus        97 ~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~  170 (260)
                      |+.+..+      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..........   
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~---  152 (323)
T cd05595          76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---  152 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcc---
Confidence            4444322      2357889999999999999999999999999999999999999999999999986432211110   


Q ss_pred             cccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHHH
Q psy7935         171 YVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFETV  242 (260)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~i  242 (260)
                             ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ............   +...++.+.++
T Consensus       153 -------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l  225 (323)
T cd05595         153 -------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSL  225 (323)
T ss_pred             -------ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence                   011112223344433  457889999999999999999998875   444555544332   33445778899


Q ss_pred             HHHHHHhcccccc
Q psy7935         243 MKTFAEVELRGRK  255 (260)
Q Consensus       243 l~~l~~~~~~~r~  255 (260)
                      +++|...++..|.
T Consensus       226 i~~~L~~dP~~R~  238 (323)
T cd05595         226 LAGLLKKDPKQRL  238 (323)
T ss_pred             HHHHccCCHHHhC
Confidence            9999988888886

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0667|consensus

Probab=99.98  E-value=4.2e-32  Score=231.88  Aligned_cols=177  Identities=23%  Similarity=0.270  Sum_probs=142.1

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-C-----CCeE-EeC-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-M-----ADIC-LDD-   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h-----~~i~-~~~-   85 (260)
                      .+|.+++.||+|+||.|.+|.+  +++.||||++..+..         ...+...|+.+|..++ |     -|++ +++ 
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~---------f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~  256 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR---------FLRQAQIEIRILELLNKHDPDDKYNIVRMLDY  256 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH---------HHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence            4689999999999999999998  489999998754431         1345667899998887 3     2566 333 


Q ss_pred             ---CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEee
Q psy7935          86 ---VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDF  154 (260)
Q Consensus        86 ---~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DF  154 (260)
                         .++.++      ..|+|++..+. ...++...++.++.||+.||.+||+.+|||+||||+||||.+  ...+||+||
T Consensus       257 F~fr~HlciVfELL~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF  335 (586)
T KOG0667|consen  257 FYFRNHLCIVFELLSTNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF  335 (586)
T ss_pred             cccccceeeeehhhhhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence               233343      88999998887 445999999999999999999999999999999999999997  668999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      |.|......             +++.+-..++.+|+..  ..|+.+.|||||||++.||.+|.
T Consensus       336 GSSc~~~q~-------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~  385 (586)
T KOG0667|consen  336 GSSCFESQR-------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE  385 (586)
T ss_pred             ccccccCCc-------------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc
Confidence            998765432             2244444556677766  67999999999999999999994

>KOG1989|consensus

Probab=99.98  E-value=1.1e-32  Score=242.28  Aligned_cols=226  Identities=15%  Similarity=0.228  Sum_probs=164.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC-Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV-QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~-~~~   89 (260)
                      ....++.+.|.+|+|+.||.|.+.  |.++|+|++...        +......+.+|++++++|+ |+||| +++. ...
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--------de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~  107 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--------DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN  107 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--------CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc
Confidence            334778899999999999999995  489999986543        1223567999999999997 99999 7772 111


Q ss_pred             h--------hhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEEE
Q psy7935          90 A--------IQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        90 ~--------~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~kl  151 (260)
                      .        +..|||||.++.+        +..+++.++++|+.|+++|+++||...  |+|||||-+||||+.++..||
T Consensus       108 ~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KL  187 (738)
T KOG1989|consen  108 RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKL  187 (738)
T ss_pred             ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEe
Confidence            1        1457777775433        445999999999999999999999986  999999999999999999999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc-------
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------  219 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~-------  219 (260)
                      ||||.++.....-+....+-.....+. -.++..+.+|+-.     ..+++|+|||++||++|.+.....|++       
T Consensus       188 CDFGSatt~~~~~~~~~e~~~ve~eI~-k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI  266 (738)
T KOG1989|consen  188 CDFGSATTKILSPTSAQEVNYVEEEIE-KYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI  266 (738)
T ss_pred             CcccccccccCCCccHHHHHHHHHHHH-hhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE
Confidence            999998654322211111101111111 1122223333333     568999999999999998765544321       


Q ss_pred             ----------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                      +..+|..||+..+.. |++...++..+.++.
T Consensus       267 lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~-RPnI~Qv~~~~~~l~  312 (738)
T KOG1989|consen  267 LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDE-RPNIYQVLEEIFELA  312 (738)
T ss_pred             EeccccCCCCccHHHHHHHHHHHHhccCccc-CCCHHHHHHHHHHHh
Confidence                            678999999988876 788888888887664

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.98  E-value=8.1e-32  Score=224.65  Aligned_cols=220  Identities=17%  Similarity=0.223  Sum_probs=155.3

Q ss_pred             ceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhhh
Q psy7935          21 AECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQ   92 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~   92 (260)
                      ++.||+|+||.||++++     .|+.+|+|++......      ......+.+|++++++++||||+ +++.  ....++
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   74 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK------VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLY   74 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh------hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEE
Confidence            36799999999999875     3789999986532211      11234577899999999999999 2221  112222


Q ss_pred             hHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          93 TLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        93 ~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                      .+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        75 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~  154 (318)
T cd05582          75 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  154 (318)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence            34444433222      235789999999999999999999999999999999999999999999999998754332111


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCcc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQ  238 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~  238 (260)
                      .          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....   +...++.
T Consensus       155 ~----------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~  224 (318)
T cd05582         155 A----------YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPE  224 (318)
T ss_pred             e----------ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence            1          011111222333333  346789999999999999999998876   344445444432   3334567


Q ss_pred             HHHHHHHHHHhccccccc
Q psy7935         239 FETVMKTFAEVELRGRKR  256 (260)
Q Consensus       239 ~~~il~~l~~~~~~~r~~  256 (260)
                      +.+++++|...++..|..
T Consensus       225 ~~~li~~~l~~~P~~R~~  242 (318)
T cd05582         225 AQSLLRALFKRNPANRLG  242 (318)
T ss_pred             HHHHHHHHhhcCHhHcCC
Confidence            789999999999998875

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=6.9e-32  Score=226.47  Aligned_cols=216  Identities=15%  Similarity=0.133  Sum_probs=150.1

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~   89 (260)
                      .|++.+.||+|+||.||+|++  +++.||+|++.....     ........+.+|++++..++||||+ ++    +....
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~   76 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL-----FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYL   76 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEE
Confidence            477899999999999999998  488999998653321     1122245688999999999999999 22    22222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          77 YLAMEYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             EEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            22       4444444332   3578888999999999999999999999999999999999999999999999875433


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-----c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-----R  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~  232 (260)
                      ...             ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....     +
T Consensus       154 ~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  220 (333)
T cd05600         154 YAN-------------SVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRP  220 (333)
T ss_pred             ccC-------------CcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCC
Confidence            110             11111222233332  457889999999999999999988875   333333333211     1


Q ss_pred             c------cCCccHHHHHHHHHHhcccc
Q psy7935         233 R------QNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       233 ~------~~~~~~~~il~~l~~~~~~~  253 (260)
                      .      ..++.+.+++.+|....+..
T Consensus       221 ~~~~~~~~~s~~~~~li~~~l~~~~~r  247 (333)
T cd05600         221 VYDDPRFNLSDEAWDLITKLINDPSRR  247 (333)
T ss_pred             CCCccccccCHHHHHHHHHHhhChhhh
Confidence            1      11345667777776544333

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.98  E-value=3.1e-32  Score=227.72  Aligned_cols=224  Identities=16%  Similarity=0.179  Sum_probs=156.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhh---hcccCCCCeE-EeCC--Cch
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRG---LMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~---l~~~~h~~i~-~~~~--~~~   89 (260)
                      |++++.||+|+||.||+|.+  +++.||||++.......     ....+.+.+|..+   ++.++||||+ +++.  ...
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-----RDEVESLMCEKRIFETANSERHPFLVNLFACFQTED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence            45689999999999999998  48899999865432111     1112345555544   4677899999 3221  122


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ..+.+++|+.+..+     ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++.......
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG  155 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence            23335555544332     2358899999999999999999999999999999999999999999999999986432221


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCC
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNR  236 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~  236 (260)
                      ....          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..+.+....   +...+
T Consensus       156 ~~~~----------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~  225 (324)
T cd05589         156 DRTS----------TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS  225 (324)
T ss_pred             Cccc----------ccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCC
Confidence            1110          11111222333333  457788999999999999999998876   445555554432   23345


Q ss_pred             ccHHHHHHHHHHhccccccc
Q psy7935         237 KQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.+.+++.+|...++..|..
T Consensus       226 ~~~~~li~~~L~~dP~~R~~  245 (324)
T cd05589         226 REAISIMRRLLRRNPERRLG  245 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCC
Confidence            67788999999999988874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.98  E-value=1e-31  Score=224.55  Aligned_cols=219  Identities=16%  Similarity=0.175  Sum_probs=154.1

Q ss_pred             ceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchh
Q psy7935          21 AECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSA   90 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~   90 (260)
                      ++.||+|+||.||+++.     .++.||+|++......    ........+.+|+.+++.++||||+ +    ......+
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~   76 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV----RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLY   76 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH----hhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEE
Confidence            36899999999999986     3788999986432211    1111234578899999999999999 2    2222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        77 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (323)
T cd05584          77 LILEYLSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE  153 (323)
T ss_pred             EEEeCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence            2       4455554332   24677888889999999999999999999999999999999999999999998643222


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccC
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQN  235 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~  235 (260)
                      .....          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..+.+..+.   +...
T Consensus       154 ~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~  223 (323)
T cd05584         154 GTVTH----------TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYL  223 (323)
T ss_pred             CCccc----------ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            11110          01111122233332  346788999999999999999998876   444555555443   2333


Q ss_pred             CccHHHHHHHHHHhccccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++.+.+++++|...++..|..
T Consensus       224 ~~~~~~li~~~l~~~p~~R~~  244 (323)
T cd05584         224 TPEARDLLKKLLKRNPSSRLG  244 (323)
T ss_pred             CHHHHHHHHHHcccCHhHcCC
Confidence            567789999999999888874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0577|consensus

Probab=99.98  E-value=2.7e-32  Score=230.29  Aligned_cols=212  Identities=16%  Similarity=0.229  Sum_probs=159.7

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--c
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--K   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~   88 (260)
                      +...|.-+..||.|+||.||-+++  +.+.||||..  .....+...   ..+.+++|+..|++++|||++ +-++.  .
T Consensus        24 PEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKM--sySGKQs~E---KWqDIlKEVrFL~~l~HPntieYkgCyLre   98 (948)
T KOG0577|consen   24 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKM--SYSGKQSNE---KWQDILKEVRFLRQLRHPNTIEYKGCYLRE   98 (948)
T ss_pred             HHHHHHHHHHhcCCccceeEEeeccCccceeeeeec--cccccccHH---HHHHHHHHHHHHHhccCCCcccccceeecc
Confidence            334466689999999999999998  5788999963  222222222   346799999999999999999 32221  2


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..-+.+|+||-+.--      .+++.+-.+..|+.+.+.||.|||+++.+|||||..|||++..|.|||+|||.+....+
T Consensus        99 ~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P  178 (948)
T KOG0577|consen   99 HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP  178 (948)
T ss_pred             chHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence            222557888755321      45688999999999999999999999999999999999999999999999999877655


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccc--------------------
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKA--------------------  217 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~--------------------  217 (260)
                      .+              ++++++||++|++.     +.|+-++||||+|++.+|+...+.|                    
T Consensus       179 An--------------sFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPt  244 (948)
T KOG0577|consen  179 AN--------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT  244 (948)
T ss_pred             hh--------------cccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCC
Confidence            43              34455555555554     6689999999999999997666543                    


Q ss_pred             -------ccHHHHHHHHHhhccccCCccHHHHHHH
Q psy7935         218 -------VDFRDMFNWILSSYRRQNRKQFETVMKT  245 (260)
Q Consensus       218 -------~~~~~~~~~~~~~~~~~~~~~~~~il~~  245 (260)
                             ..+..+++.|+.+.+.. +++-+++++.
T Consensus       245 Lqs~eWS~~F~~Fvd~CLqKipqe-Rptse~ll~H  278 (948)
T KOG0577|consen  245 LQSNEWSDYFRNFVDSCLQKIPQE-RPTSEELLKH  278 (948)
T ss_pred             CCCchhHHHHHHHHHHHHhhCccc-CCcHHHHhhc
Confidence                   11557788999977776 5555665554

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.98  E-value=5.7e-32  Score=222.54  Aligned_cols=222  Identities=18%  Similarity=0.228  Sum_probs=155.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|++.+.||.|+||.||+|++  ++..||+|++......  .     ....+.+|+.++++++||||+ +++.  ....
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   77 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--G-----APCTAIREVSLLKNLKHANIVTLHDIIHTERC   77 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--C-----cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence            3578899999999999999998  4889999986433211  1     124567899999999999999 3221  1112


Q ss_pred             h--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 I--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .        ++|.+++...  ...++...+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        78 ~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~  155 (288)
T cd07871          78 LTLVFEYLDSDLKQYLDNC--GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV  155 (288)
T ss_pred             EEEEEeCCCcCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccC
Confidence            2        4555555432  23467888899999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-----  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----  231 (260)
                      .....          ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..+....     
T Consensus       156 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  225 (288)
T cd07871         156 PTKTY----------SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTE  225 (288)
T ss_pred             CCccc----------cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            21110          011112223333333   346788999999999999999987765   233332222110     


Q ss_pred             ----------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ----------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ----------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                  ....+++..+++++|...+++.|..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t  278 (288)
T cd07871         226 ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS  278 (288)
T ss_pred             HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC
Confidence                                        0112345678999999999998865

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA02988 hypothetical protein; Provisional

Probab=99.98  E-value=3.7e-32  Score=223.06  Aligned_cols=217  Identities=14%  Similarity=0.188  Sum_probs=153.0

Q ss_pred             eeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC------Cchhh---
Q psy7935          22 ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV------QKSAI---   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~------~~~~~---   91 (260)
                      ..+++|+++.||+|.++|++||||.+......     .....+.+.+|+.++.+++||||+ +++.      ....+   
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv  100 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKG-----HKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLI  100 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccccc-----cHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEE
Confidence            78999999999999999999999985432211     111235688999999999999999 4332      11122   


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                            ++|.+++...   +.+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||++.......
T Consensus       101 ~Ey~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~  177 (283)
T PHA02988        101 LEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP  177 (283)
T ss_pred             EEeCCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence                  4566665443   3577888889999999999999984 99999999999999999999999999987654321


Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-----ccCC
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-----RQNR  236 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~~  236 (260)
                      ..         ...+..+.+|++.......++.++|+||||+++|++++|..|+.   ..++...+.....     ...+
T Consensus       178 ~~---------~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  248 (283)
T PHA02988        178 FK---------NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCP  248 (283)
T ss_pred             cc---------ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCc
Confidence            11         11122233333333323568899999999999999999988865   3444444433221     1224


Q ss_pred             ccHHHHHHHHHHhcccccc
Q psy7935         237 KQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~  255 (260)
                      +.+.+++.+|...++..|.
T Consensus       249 ~~l~~li~~cl~~dp~~Rp  267 (283)
T PHA02988        249 LEIKCIVEACTSHDSIKRP  267 (283)
T ss_pred             HHHHHHHHHHhcCCcccCc
Confidence            4566777777766666665

>KOG1026|consensus

Probab=99.98  E-value=1.9e-32  Score=240.01  Aligned_cols=231  Identities=17%  Similarity=0.231  Sum_probs=177.0

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ...+.+.......+.||+|+||+||+|+..       ..-||||.++.+       .....+++|.+|++.+..++||||
T Consensus       479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-------a~~~~~~dF~REaeLla~l~H~nI  551 (774)
T KOG1026|consen  479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-------AENQARQDFRREAELLAELQHPNI  551 (774)
T ss_pred             ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-------ccHHHHHHHHHHHHHHHhccCCCe
Confidence            555667777888999999999999999963       357899975322       222247899999999999999999


Q ss_pred             E-EeC----CCchhh-------hhHHHhhccCcc-------cc----cchHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy7935          82 C-LDD----VQKSAI-------QTLISNLDSQNI-------TR----ENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT  138 (260)
Q Consensus        82 ~-~~~----~~~~~~-------~~l~~~l~~~~~-------~~----~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp  138 (260)
                      | +++    ....++       |+|.+||.....       +.    .++..+.+.|+.|||.|++||-++.++||||-+
T Consensus       552 VrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLAT  631 (774)
T KOG1026|consen  552 VRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLAT  631 (774)
T ss_pred             EEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhh
Confidence            9 333    233333       888888765433       22    288999999999999999999999999999999


Q ss_pred             CcEEEccCCcEEEEeecccccccccccccccccccc-cceeeeeeeeeecCc-ccc--ccccccceeEeecceeeeeccc
Q psy7935         139 SNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLK-RNLTTIIVVAYCWSK-GTL--QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       139 ~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      +|.|++++..|||+|||+++..     +++|.|... ..+.     +-.|.+ +..  +.++.++||||||+++||+.+-
T Consensus       632 RNCLVge~l~VKIsDfGLsRdi-----YssDYYk~~~~t~l-----PIRWMppEsIly~kFTteSDVWs~GVvLWEIFsy  701 (774)
T KOG1026|consen  632 RNCLVGENLVVKISDFGLSRDI-----YSSDYYKVRGNTLL-----PIRWMPPESILYGKFTTESDVWSFGVVLWEIFSY  701 (774)
T ss_pred             hhceeccceEEEecccccchhh-----hhhhhhcccCCcee-----eeecCCHHHhhcCcccchhhhhhhhhhhhhhhcc
Confidence            9999999999999999999754     445666544 2222     223433 433  7799999999999999998763


Q ss_pred             c---------------------------ccccHHHHHHHHHhhccccCCccHHHHHHHHHHhcccccccc
Q psy7935         215 D---------------------------KAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       215 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      .                           +|....+++..||...+.. ||++.||-.+|...-...-.++
T Consensus       702 G~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~-RPsF~eI~~~L~~~~~~s~~~~  770 (774)
T KOG1026|consen  702 GKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKR-RPSFKEIHSRLQAWAQASPKYS  770 (774)
T ss_pred             ccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCccc-CCCHHHHHHHHHHHHhcCcccc
Confidence            3                           2455788999999977775 8999999999987654444333

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=9e-32  Score=224.95  Aligned_cols=225  Identities=16%  Similarity=0.188  Sum_probs=156.3

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCC-eE-EeCC--Cchhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD-IC-LDDV--QKSAI   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~-~~~~--~~~~~   91 (260)
                      |++.+.||+|+||.||+|++.  ++.||+|++......     .....+.+..|..++..+.|++ ++ +.+.  ....+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~   76 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-----QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL   76 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEE
Confidence            677899999999999999984  678999986533211     1112356778899999998766 44 2211  11122


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK  156 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC
Confidence            234444443322      22478888999999999999999999999999999999999999999999999864321111


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRK  237 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~  237 (260)
                      .          .....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....   +...++
T Consensus       157 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (324)
T cd05587         157 T----------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSK  226 (324)
T ss_pred             c----------eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence            0          0011122223333333  446789999999999999999999876   445555555432   233356


Q ss_pred             cHHHHHHHHHHhcccccccc
Q psy7935         238 QFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~~~  257 (260)
                      .+.+++.+|...++..|..+
T Consensus       227 ~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         227 EAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHhhcCHHHcCCC
Confidence            67789999998888888753

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0582|consensus

Probab=99.97  E-value=4.2e-32  Score=222.26  Aligned_cols=191  Identities=16%  Similarity=0.232  Sum_probs=149.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+.|++.+.||.|..+.||+|+.  ++..||||++...+++..       -..+.+|+..++.++||||+     |....
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-------ld~l~kE~~~msl~~HPNIv~~~~sFvv~~   97 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-------LDALRKEVQTMSLIDHPNIVTYHCSFVVDS   97 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-------HHHHHHHHHHhhhcCCCCcceEEEEEEecc
Confidence            45588999999999999999998  489999999876665432       25688999999999999999     43333


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...+       |++.+.+...- ...+.+..+..|+++++.||.|||.+|-+|||+|+.||||+.+|.|||+|||.+...
T Consensus        98 ~LWvVmpfMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l  176 (516)
T KOG0582|consen   98 ELWVVMPFMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL  176 (516)
T ss_pred             eeEEeehhhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence            3332       56665554432 334899999999999999999999999999999999999999999999999998666


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....+..      -..+.++.++.+|++|+.+    ..|+.|+||||||++..|+.+|..|+.
T Consensus       177 ~~~G~R~------~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~  233 (516)
T KOG0582|consen  177 FDSGDRQ------VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS  233 (516)
T ss_pred             cccCcee------eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence            5543221      1122344445455566652    669999999999999999999998866

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=1.1e-31  Score=224.36  Aligned_cols=221  Identities=18%  Similarity=0.219  Sum_probs=153.1

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHh-hhcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIR-GLMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  +|+.||+|++......     .......+..|.. +++.++||||+ +++.  .....+.++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-----KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-----hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEE
Confidence            4689999999999998  4899999986543211     1111234555554 45788999999 2221  112222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........... 
T Consensus        76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-  154 (323)
T cd05575          76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS-  154 (323)
T ss_pred             cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc-
Confidence            44443322      23578888899999999999999999999999999999999999999999999865322211110 


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                               ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+.   +...++.+.+
T Consensus       155 ---------~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (323)
T cd05575         155 ---------TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARH  225 (323)
T ss_pred             ---------cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence                     01111122333333  457789999999999999999998875   455666655542   2334677899


Q ss_pred             HHHHHHHhcccccccc
Q psy7935         242 VMKTFAEVELRGRKRC  257 (260)
Q Consensus       242 il~~l~~~~~~~r~~~  257 (260)
                      ++++|...++..|...
T Consensus       226 li~~~l~~~p~~R~~~  241 (323)
T cd05575         226 LLEGLLQKDRTKRLGA  241 (323)
T ss_pred             HHHHHhhcCHHhCCCC
Confidence            9999999999888754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=5e-32  Score=226.19  Aligned_cols=220  Identities=16%  Similarity=0.194  Sum_probs=154.8

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++.  ++.||+|++......     .......+..|.+++..+ +||||+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-----QDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-----hhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEE
Confidence            36899999999999984  789999986433211     111234567788888765 799998 2221  111223344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..........  
T Consensus        76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~--  153 (321)
T cd05591          76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT--  153 (321)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc--
Confidence            44443322      2357888889999999999999999999999999999999999999999999986532221110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.++.+..+..   ...++.+.+
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~  225 (321)
T cd05591         154 --------TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVS  225 (321)
T ss_pred             --------cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence                    011122223344433  457889999999999999999999876   4556666655432   233577889


Q ss_pred             HHHHHHHhccccccc
Q psy7935         242 VMKTFAEVELRGRKR  256 (260)
Q Consensus       242 il~~l~~~~~~~r~~  256 (260)
                      +++.|...++..|..
T Consensus       226 ll~~~L~~dp~~R~~  240 (321)
T cd05591         226 ILKAFMTKNPNKRLG  240 (321)
T ss_pred             HHHHHhccCHHHcCC
Confidence            999999999999873

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=3.8e-32  Score=228.30  Aligned_cols=186  Identities=18%  Similarity=0.270  Sum_probs=132.9

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc--
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK--   88 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~--   88 (260)
                      |++.+.||+|+||.||+|++  +|..||||.+......      ......+.+|+.++++++||||+ +.+.    ..  
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   75 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH------VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE   75 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc------chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCC
Confidence            67789999999999999998  4899999986432111      11234688999999999999998 3221    11  


Q ss_pred             ---hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          89 ---SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ---~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                         .++      ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~  152 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  152 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence               111      3344444332   2588899999999999999999999999999999999999999999999999875


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........ ..+      ....+...+.+|+..    ..+++++|+||+|++++++++|+.|+.
T Consensus       153 ~~~~~~~~-~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~  209 (338)
T cd07859         153 AFNDTPTA-IFW------TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP  209 (338)
T ss_pred             cccccCcc-ccc------cCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCC
Confidence            43221110 000      001111122233322    457889999999999999999987763

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0201|consensus

Probab=99.97  E-value=2.4e-32  Score=223.28  Aligned_cols=213  Identities=17%  Similarity=0.268  Sum_probs=167.6

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      ...|..++.||+|+||.||+|.++  ++.||+|++.......       ..+.+..|+.++.+++++||. +++.  .+.
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d-------eIediqqei~~Ls~~~~~~it~yygsyl~g~   84 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED-------EIEDIQQEISVLSQCDSPNITEYYGSYLKGT   84 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcch-------hhHHHHHHHHHHHhcCcchHHhhhhheeecc
Confidence            344666799999999999999984  8999999976544321       235688899999999999997 3332  244


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      .+..+|+|+.++..      +..+.+..+.-++++++.|+.|||+++.+|||||++|||+...|.+|++|||.+...+..
T Consensus        85 ~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~  164 (467)
T KOG0201|consen   85 KLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT  164 (467)
T ss_pred             cHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeech
Confidence            45668888877644      334577777889999999999999999999999999999999999999999999776554


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc------------------c-----
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA------------------V-----  218 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~------------------~-----  218 (260)
                      ....          .+++++.++++|+..  ..|+.++||||+|++.+|+.+|.-|                  +     
T Consensus       165 ~~rr----------~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~  234 (467)
T KOG0201|consen  165 VKRR----------KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGD  234 (467)
T ss_pred             hhcc----------ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccc
Confidence            3332          245566666677766  4799999999999999999998754                  1     


Q ss_pred             ---cHHHHHHHHHhhccccCCccHHHHHHH
Q psy7935         219 ---DFRDMFNWILSSYRRQNRKQFETVMKT  245 (260)
Q Consensus       219 ---~~~~~~~~~~~~~~~~~~~~~~~il~~  245 (260)
                         .++++++.|+...|.+ |+++.++++.
T Consensus       235 ~S~~~kEFV~~CL~k~P~~-RpsA~~LLKh  263 (467)
T KOG0201|consen  235 FSPPFKEFVEACLDKNPEF-RPSAKELLKH  263 (467)
T ss_pred             cCHHHHHHHHHHhhcCccc-CcCHHHHhhh
Confidence               1679999999988877 6677766654

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=1.7e-31  Score=227.98  Aligned_cols=224  Identities=13%  Similarity=0.111  Sum_probs=150.5

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      +|+.++.||+|+||.||+|++  +++.||+|++..+..     ........+.+|+.++++++|+||+     +.+....
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-----LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEE
Confidence            577899999999999999998  488999998654321     1222245688999999999999999     2322222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++++||+|||++.....
T Consensus        77 ~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~  153 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW  153 (381)
T ss_pred             EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence            22       3444444332   3578888889999999999999999999999999999999999999999999764321


Q ss_pred             cccc---------------cccccc---------------------ccc-ceeeeeeeeeecCcccc--ccccccceeEe
Q psy7935         163 TEDK---------------AVDLYV---------------------LKR-NLTTIIVVAYCWSKGTL--QSYNHHLVMID  203 (260)
Q Consensus       163 ~~~~---------------~~d~~~---------------------~~~-~~~~~~~~~~~~~~~~~--~~~~~~~di~s  203 (260)
                      ....               ..+.+.                     ... ...+..++..+.+|+..  ..++.++|+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (381)
T cd05626         154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS  233 (381)
T ss_pred             ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence            1000               000000                     000 00112223333444443  45788999999


Q ss_pred             ecceeeeecccccccc---HHHHHHHHHhh-----ccc--cCCccHHHHHHHHHH
Q psy7935         204 FGLSQIKVSTEDKAVD---FRDMFNWILSS-----YRR--QNRKQFETVMKTFAE  248 (260)
Q Consensus       204 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~--~~~~~~~~il~~l~~  248 (260)
                      +|++++++++|..|+.   ..+....+...     .+.  ...+.+.+++.+|..
T Consensus       234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~  288 (381)
T cd05626         234 VGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCC  288 (381)
T ss_pred             hhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHcc
Confidence            9999999999999886   23333333321     111  124566777877653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=9.7e-32  Score=228.10  Aligned_cols=223  Identities=13%  Similarity=0.141  Sum_probs=152.1

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|+..+.||+|+||.||+|++  +++.||+|++....     .........+.+|+.++.+++|+||+     +.+....
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~   76 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD-----MLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNL   76 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHH-----HHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeE
Confidence            477899999999999999998  48899999864322     11222245688899999999999999     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++..   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        77 ~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~  153 (363)
T cd05628          77 YLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK  153 (363)
T ss_pred             EEEEcCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence            22       344444433   23588899999999999999999999999999999999999999999999999875432


Q ss_pred             cccc----------cc-------------ccccc-cc-ceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         163 TEDK----------AV-------------DLYVL-KR-NLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       163 ~~~~----------~~-------------d~~~~-~~-~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      ....          ..             +.+.. .. ...+..++..+.+|+..  ..++.++|+||+|++++++++|.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~  233 (363)
T cd05628         154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (363)
T ss_pred             cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence            1100          00             00000 00 01112233334444443  45788999999999999999999


Q ss_pred             cccc---HHHHHHHHHhhc-----cc--cCCccHHHHHHHHH
Q psy7935         216 KAVD---FRDMFNWILSSY-----RR--QNRKQFETVMKTFA  247 (260)
Q Consensus       216 ~~~~---~~~~~~~~~~~~-----~~--~~~~~~~~il~~l~  247 (260)
                      .|+.   ..+...++....     +.  ...+.+.+++.++.
T Consensus       234 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~  275 (363)
T cd05628         234 PPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFC  275 (363)
T ss_pred             CCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHc
Confidence            9986   445555554321     11  12345666666654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=3.6e-31  Score=221.84  Aligned_cols=223  Identities=13%  Similarity=0.103  Sum_probs=156.4

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .|++.+.||+|+||.||++++  +|+.||+|++.....     ........+.+|+.+++.++|+||+ +    .+....
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~   76 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-----LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNL   76 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeE
Confidence            477889999999999999998  488999998654321     1222345688899999999999998 2    222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...  ...+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          77 YLVMEYQPGGDLLSLLNRY--EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             EEEECCCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            22       4555555433  23588899999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCccc--------cccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGT--------LQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      .......         ...+...+.+|+.        ...++.++|+||+|++++++++|..|+.   ..+.+..++...
T Consensus       155 ~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~  225 (330)
T cd05601         155 NKMVNSK---------LPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQ  225 (330)
T ss_pred             CCceeee---------cccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCC
Confidence            2211000         0011111222332        2346788999999999999999999876   344445544321


Q ss_pred             -----cc--cCCccHHHHHHHHHHhccccccc
Q psy7935         232 -----RR--QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 -----~~--~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                           +.  ..++.+.++++.|.. ++..|..
T Consensus       226 ~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t  256 (330)
T cd05601         226 RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLG  256 (330)
T ss_pred             CccCCCCCCCCCHHHHHHHHHHcc-ChhhCCC
Confidence                 11  124567888888876 7776653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=1.7e-31  Score=228.05  Aligned_cols=231  Identities=13%  Similarity=0.104  Sum_probs=152.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|+.++.||+|+||.||+|++  +++.+|+|++....     .........+.+|+.+++++.|+||+     +.+....
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-----VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEE
Confidence            477899999999999999998  48899999864321     11222345788999999999999999     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~  153 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  153 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence            22       3444444332   3578888999999999999999999999999999999999999999999999754321


Q ss_pred             cccc------------cc---------------ccc---------ccc-cceeeeeeeeeecCcccc--ccccccceeEe
Q psy7935         163 TEDK------------AV---------------DLY---------VLK-RNLTTIIVVAYCWSKGTL--QSYNHHLVMID  203 (260)
Q Consensus       163 ~~~~------------~~---------------d~~---------~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~di~s  203 (260)
                      ....            ..               +..         ... ....+..++..+.+|+..  ..++.++|+||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS  233 (382)
T cd05625         154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS  233 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence            1000            00               000         000 000112233334445444  45788999999


Q ss_pred             ecceeeeecccccccc---HHHHHHHHHhhc-----c--ccCCccHHHHHHHHHHhccccccc
Q psy7935         204 FGLSQIKVSTEDKAVD---FRDMFNWILSSY-----R--RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       204 ~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~--~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +||+++++++|..|+.   ..+....+....     +  ....+...+++.+|.. ++..|..
T Consensus       234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~  295 (382)
T cd05625         234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR-GPEDRLG  295 (382)
T ss_pred             chHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHcc-CHhHcCC
Confidence            9999999999999886   223333333211     1  1123555666766643 5566643

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=1.2e-31  Score=223.89  Aligned_cols=221  Identities=18%  Similarity=0.212  Sum_probs=153.6

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHh-hhcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIR-GLMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  .++.||+|++.....     ........+..|.. +++.++||||+ +.+.  .....+.++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI-----LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEE
Confidence            4689999999999998  488999998643321     11112334555554 57888999999 3221  122223355


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++........... 
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-  154 (321)
T cd05603          76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS-  154 (321)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc-
Confidence            55544332      23578888888999999999999999999999999999999999999999999864322211100 


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                               ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ...+.+.++...   +...+..+.+
T Consensus       155 ---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (321)
T cd05603         155 ---------TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACD  225 (321)
T ss_pred             ---------cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence                     11112223334433  457789999999999999999999875   455566655532   2234556788


Q ss_pred             HHHHHHHhcccccccc
Q psy7935         242 VMKTFAEVELRGRKRC  257 (260)
Q Consensus       242 il~~l~~~~~~~r~~~  257 (260)
                      ++.+|...+++.|...
T Consensus       226 li~~~l~~~p~~R~~~  241 (321)
T cd05603         226 LLVGLLHKDQRRRLGA  241 (321)
T ss_pred             HHHHHccCCHhhcCCC
Confidence            9999998888888653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=1.2e-31  Score=224.87  Aligned_cols=226  Identities=17%  Similarity=0.203  Sum_probs=156.1

Q ss_pred             cCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC--Cc
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV--QK   88 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~--~~   88 (260)
                      |++.+.||+|+||.||+++.     .++.||+|++......    ......+.+.+|+.++..++ |++|+ +.+.  ..
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV----QKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE   77 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh----hhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC
Confidence            67789999999999999986     3789999986432211    11122356788999999994 89988 2211  11


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..++.+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        78 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          78 AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence            222224444433222      23578899999999999999999999999999999999999999999999999876533


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc-------HHHHHHHHHhhc-
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWILSSY-  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~-  231 (260)
                      ......         ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.       ...+...+.... 
T Consensus       158 ~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~  228 (332)
T cd05614         158 EEKERT---------YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP  228 (332)
T ss_pred             cCCCcc---------ccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC
Confidence            221111         011122223344433   236778999999999999999998874       233333443322 


Q ss_pred             --cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        +...++.+.+++.+|...++..|..
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~R~~  255 (332)
T cd05614         229 PFPSFIGPEAQDLLHKLLRKDPKKRLG  255 (332)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence              2234567789999999998888873

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5.7e-32  Score=231.15  Aligned_cols=177  Identities=18%  Similarity=0.207  Sum_probs=132.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ...|++++.||+|+||.||+|.+  +++.||+|...              ...+.+|++++++++||||+ +.+    ..
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~  156 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------------RGGTATEAHILRAINHPSIIQLKGTFTYNK  156 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC
Confidence            35699999999999999999998  48899999521              23467899999999999999 322    11


Q ss_pred             chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++      ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       157 ~~~lv~e~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~  233 (391)
T PHA03212        157 FTCLILPRYKTDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPV  233 (391)
T ss_pred             eeEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccc
Confidence            1111      5566666443   247888899999999999999999999999999999999999999999999986532


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      ......         .....++..+.+|+..  ..+++++|+||+|++++++++|..|
T Consensus       234 ~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p  282 (391)
T PHA03212        234 DINANK---------YYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS  282 (391)
T ss_pred             cccccc---------cccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            211110         0011122222334433  4578899999999999999998754

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=9.7e-32  Score=222.69  Aligned_cols=222  Identities=18%  Similarity=0.220  Sum_probs=154.6

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +++.||+|++.......       ....+.+|+.+++.++||||+     +.+...
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   77 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-------TPFTAIREASLLKGLKHANIVLLHDIIHTKET   77 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-------cchhHHHHHHHHhhCCCCCcCeEEEEEecCCe
Confidence            4588899999999999999998  48899999864332111       123567899999999999998     222222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      +++.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        78 ~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  155 (303)
T cd07869          78 LTLVFEYVHTDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSV  155 (303)
T ss_pred             EEEEEECCCcCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence            222      4444544332  23478888899999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhcc---
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYR---  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~---  232 (260)
                      ......          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.    ..+.++.+.....   
T Consensus       156 ~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  225 (303)
T cd07869         156 PSHTYS----------NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPN  225 (303)
T ss_pred             CCccCC----------CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCC
Confidence            211100          01111223333332   346788999999999999999988875    2233332221000   


Q ss_pred             --------------------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 --------------------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 --------------------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                      ....+.+.+++++|...+++.|..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s  281 (303)
T cd07869         226 EDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS  281 (303)
T ss_pred             hhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC
Confidence                                            001245678999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0032|consensus

Probab=99.97  E-value=1.5e-31  Score=224.86  Aligned_cols=225  Identities=18%  Similarity=0.223  Sum_probs=175.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----E
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----L   83 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~   83 (260)
                      .....+|++.+.||+|.||.||+|+.  +|+++|+|.+.++..+...     ....+.+|+.+++++. ||||+     +
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~-----~~~~v~~Ev~il~~l~~hpniv~l~~~~  105 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE-----DREDVRREVAILQQLSGHPNIVQLKDAF  105 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc-----cHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            44556788899999999999999998  4899999998776654332     2467999999999998 99999     3


Q ss_pred             eCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC----CcEEEE
Q psy7935          84 DDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD----HHLVMI  152 (260)
Q Consensus        84 ~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~----~~~kl~  152 (260)
                      .+....++       |.|++++-..    .+++..+..++.|++.+++|||+.||+||||||+|+|+...    +.+|++
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~  181 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLI  181 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEe
Confidence            33332222       6666666554    28999999999999999999999999999999999999873    589999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCccccc--cccccceeEeecceeeeecccccccc---HHHHHHHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ--SYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWI  227 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~  227 (260)
                      |||++......+           .+.++++...+.+|+...  .+++..|+||.|++.+.+++|.-|+.   .......+
T Consensus       182 DFGla~~~~~~~-----------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i  250 (382)
T KOG0032|consen  182 DFGLAKFIKPGE-----------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI  250 (382)
T ss_pred             eCCCceEccCCc-----------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH
Confidence            999998765522           233455555566676664  79999999999999999999988888   34555666


Q ss_pred             HhhccccC-------CccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYRRQN-------RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~~~~-------~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+.....       +..+.+++..+...+++.|..
T Consensus       251 ~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t  286 (382)
T KOG0032|consen  251 LRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT  286 (382)
T ss_pred             HcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC
Confidence            66654443       445578888888888887764

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=7.1e-32  Score=236.72  Aligned_cols=229  Identities=18%  Similarity=0.268  Sum_probs=160.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++.......      .....+.+|+..+..++|+|++ +.+.    
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~------~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~  103 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE------ADKNRAQAEVCCLLNCDFFSIVKCHEDFAKK  103 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH------HHHHHHHHHHHHHhcCCCCcEEEeecceecc
Confidence            446799999999999999999997  48999999875543221      1245688899999999999999 3221    


Q ss_pred             Cc------hhh---------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          87 QK------SAI---------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        87 ~~------~~~---------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                      ..      ..+         ++|.+++.... ....+++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence            10      011         45555553321 134578889999999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHH
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFN  225 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~  225 (260)
                      |+|||+++...........        .+..+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+++.
T Consensus       184 L~DFGls~~~~~~~~~~~~--------~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~  255 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVG--------RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMH  255 (496)
T ss_pred             EEecccCeecccccccccc--------ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            9999998765432211100        011112223333333  457889999999999999999988865   444555


Q ss_pred             HHHhhc----cccCCccHHHHHHHHHHhccccccc
Q psy7935         226 WILSSY----RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       226 ~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+.+.    +...++.+.+++.+|...++..|..
T Consensus       256 ~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs  290 (496)
T PTZ00283        256 KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPS  290 (496)
T ss_pred             HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence            544432    2233456677777777777766653

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=9e-32  Score=225.35  Aligned_cols=220  Identities=17%  Similarity=0.244  Sum_probs=152.0

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++.  ++.+|+|++........     .....+.+|+.++.++ +||||+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcch-----hHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEE
Confidence            36899999999999984  78999998654332211     1234577888888776 799999 3221  111222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.......... 
T Consensus        76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~-  154 (329)
T cd05618          76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS-  154 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc-
Confidence            44443322      23588899999999999999999999999999999999999999999999999865322211110 


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------------HHHHHHHHHhh---cc
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------------FRDMFNWILSS---YR  232 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------------~~~~~~~~~~~---~~  232 (260)
                               ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.            ...+.+.+...   .+
T Consensus       155 ---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p  225 (329)
T cd05618         155 ---------TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP  225 (329)
T ss_pred             ---------cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC
Confidence                     11112222333333  456789999999999999999998873            11223333332   23


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ......+.+++++|...++..|..
T Consensus       226 ~~~~~~~~~ll~~~L~~dP~~R~~  249 (329)
T cd05618         226 RSLSVKAASVLKSFLNKDPKERLG  249 (329)
T ss_pred             CCCCHHHHHHHHHHhcCCHHHcCC
Confidence            334566789999999999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=1.4e-31  Score=227.43  Aligned_cols=217  Identities=16%  Similarity=0.124  Sum_probs=150.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ..+.|++.+.||+|+||.||++++.  ++.+|+|++.....     ........+.+|+.+++.++||||+ ++    +.
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~  115 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM-----IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD  115 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            3456889999999999999999984  78999998643221     1111235578899999999999999 22    22


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...    .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++..
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         116 KYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence            22222       4455554332    378888999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      .........     .    +..++..+.+|+..      ..++.++|+||+|++++++++|..|+.   .......+...
T Consensus       192 ~~~~~~~~~-----~----~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~  262 (370)
T cd05621         192 MDETGMVRC-----D----TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDH  262 (370)
T ss_pred             cccCCceec-----c----cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            543221110     0    11122223333333      236789999999999999999999876   34444555432


Q ss_pred             cc-----c--cCCccHHHHHHHHHH
Q psy7935         231 YR-----R--QNRKQFETVMKTFAE  248 (260)
Q Consensus       231 ~~-----~--~~~~~~~~il~~l~~  248 (260)
                      ..     .  ..++.+.+++..+..
T Consensus       263 ~~~~~~p~~~~~s~~~~~li~~~L~  287 (370)
T cd05621         263 KNSLNFPEDVEISKHAKNLICAFLT  287 (370)
T ss_pred             CcccCCCCcccCCHHHHHHHHHHcc
Confidence            21     1  113445666666654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=5.1e-31  Score=223.49  Aligned_cols=231  Identities=13%  Similarity=0.140  Sum_probs=155.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|+..+.||+|+||.||++++  +++.||+|++.....     ........+.+|+.++..++|++++     +.+....
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~   76 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-----LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNL   76 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            477889999999999999998  488999998643211     1122245678899999999999999     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        77 ~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~  153 (360)
T cd05627          77 YLIMEFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK  153 (360)
T ss_pred             EEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence            22       4444444332   3578899999999999999999999999999999999999999999999999865432


Q ss_pred             cccc---------c--------------ccccccc--cceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         163 TEDK---------A--------------VDLYVLK--RNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       163 ~~~~---------~--------------~d~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      ....         .              ...+...  ...++..++..+.+|+..  ..++.++|+||+|++++++++|.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~  233 (360)
T cd05627         154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY  233 (360)
T ss_pred             ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence            1100         0              0000000  001112233334444443  45788999999999999999999


Q ss_pred             cccc---HHHHHHHHHhhc-----cc--cCCccHHHHHHHHHHhccccccc
Q psy7935         216 KAVD---FRDMFNWILSSY-----RR--QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       216 ~~~~---~~~~~~~~~~~~-----~~--~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .|+.   ..+....+....     +.  ..++.+.+++.++. .++..|..
T Consensus       234 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~  283 (360)
T cd05627         234 PPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIG  283 (360)
T ss_pred             CCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCC
Confidence            8875   445555544311     11  12345677777765 35666653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=2.5e-31  Score=222.38  Aligned_cols=220  Identities=18%  Similarity=0.225  Sum_probs=151.2

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHh-hhcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIR-GLMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  +|+.+|+|++..+...     .......+..|.. +++.++||||+ +++.  .....+.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-----NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEE
Confidence            3689999999999998  4889999986543211     1112234555554 46778999999 2221  112222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........... 
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~-  154 (325)
T cd05604          76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT-  154 (325)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc-
Confidence            44443322      23588899999999999999999999999999999999999999999999999864322211110 


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  241 (260)
                               ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.++....   ...+..+.+
T Consensus       155 ---------~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (325)
T cd05604         155 ---------TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWS  225 (325)
T ss_pred             ---------cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHH
Confidence                     11112222333333  456789999999999999999998876   4555566555432   223456678


Q ss_pred             HHHHHHHhccccccc
Q psy7935         242 VMKTFAEVELRGRKR  256 (260)
Q Consensus       242 il~~l~~~~~~~r~~  256 (260)
                      ++.+|...++..|..
T Consensus       226 ll~~ll~~~p~~R~~  240 (325)
T cd05604         226 ILEELLEKDRQRRLG  240 (325)
T ss_pred             HHHHHhccCHHhcCC
Confidence            899998888888864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=4.6e-32  Score=235.08  Aligned_cols=221  Identities=15%  Similarity=0.233  Sum_probs=152.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---   86 (260)
                      .....|++.+.||+|+||.||+|.+  +++.||||.+....            ....+|+.+++.++||||+ +.+.   
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------------~~~~~Ei~il~~l~h~niv~l~~~~~~  130 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------------QYKNRELLIMKNLNHINIIFLKDYYYT  130 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHhcCCCCCcceeeeEee
Confidence            3445689999999999999999998  48899999753211            2245799999999999998 3221   


Q ss_pred             -------CchhhhhHHHhhccC---------cccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-CcE
Q psy7935          87 -------QKSAIQTLISNLDSQ---------NITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHL  149 (260)
Q Consensus        87 -------~~~~~~~l~~~l~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-~~~  149 (260)
                             ...+++.+++|+.+.         .....+++..++.++.|++.||+|||+++|+||||||+|||++.+ +.+
T Consensus       131 ~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~v  210 (440)
T PTZ00036        131 ECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTL  210 (440)
T ss_pred             cccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCce
Confidence                   011122234443321         113458888999999999999999999999999999999999965 479


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHH
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDM  223 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~  223 (260)
                      ||+|||+++.........           ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.
T Consensus       211 kL~DFGla~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~  279 (440)
T PTZ00036        211 KLCDFGSAKNLLAGQRSV-----------SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQ  279 (440)
T ss_pred             eeeccccchhccCCCCcc-----------cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            999999997654322111           11112223344433   247889999999999999999987765   1222


Q ss_pred             HHHHHhh--------------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         224 FNWILSS--------------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       224 ~~~~~~~--------------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.++...                                .+...++++.+++.+|...++..|..
T Consensus       280 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~t  344 (440)
T PTZ00036        280 LVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLN  344 (440)
T ss_pred             HHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcC
Confidence            2222110                                11122456788999998888888864

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=2.5e-31  Score=222.20  Aligned_cols=224  Identities=16%  Similarity=0.163  Sum_probs=155.2

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC--Cchhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV--QKSAI   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~--~~~~~   91 (260)
                      |++.+.||+|+||.||+|++.  ++.||+|++......     .......+..|..++..+. |++++ +.+.  ....+
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~   76 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-----QDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRL   76 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEE
Confidence            667899999999999999984  779999986543211     1112345667777777774 67766 2221  11122


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~  156 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV  156 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC
Confidence            224444433222      23578889999999999999999999999999999999999999999999999864322111


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRK  237 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~  237 (260)
                      ..          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++...+....   +...++
T Consensus       157 ~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  226 (323)
T cd05616         157 TT----------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSK  226 (323)
T ss_pred             cc----------ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCH
Confidence            10          011111222333333  457889999999999999999999976   455555555533   233456


Q ss_pred             cHHHHHHHHHHhccccccc
Q psy7935         238 QFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~~  256 (260)
                      .+.+++.+|...++..|..
T Consensus       227 ~~~~li~~~l~~~p~~R~~  245 (323)
T cd05616         227 EAVAICKGLMTKHPGKRLG  245 (323)
T ss_pred             HHHHHHHHHcccCHHhcCC
Confidence            7788999999888888865

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=9.8e-32  Score=220.86  Aligned_cols=188  Identities=15%  Similarity=0.234  Sum_probs=135.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .|++.+.||+|+||.||+|++.  ++.+|+|++.......      ...+.+.+|++++++++||||+ +.+.  .....
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE------EVKETTLRELKMLRTLKQENIVELKEAFRRRGKL   75 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc------cchhhHHHHHHHHHhCCCccccchhhhEecCCEE
Confidence            5788999999999999999984  7899999865432111      1245678899999999999998 2221  11122


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++|+.+..+      ...+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||++........
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence            334555443211      23478888999999999999999999999999999999999999999999999876533221


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....         ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~  202 (287)
T cd07848         156 ANYT---------EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFP  202 (287)
T ss_pred             cccc---------ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCC
Confidence            1100         01111122333332  457789999999999999999987765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=2.7e-31  Score=225.73  Aligned_cols=228  Identities=14%  Similarity=0.103  Sum_probs=153.4

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      ..+.|++.+.||+|+||.||++++  +++.||+|++....     .........+.+|+.+++.++||||+ +.+.  ..
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~  115 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD  115 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            345588899999999999999998  48899999864321     11112234577899999999999999 2211  12


Q ss_pred             hhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          89 SAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ..++.+++|+.+..+     ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~  195 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN  195 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence            222234444433322     123778888889999999999999999999999999999999999999999998765332


Q ss_pred             ccccccccccccceeeeeeeeeecCcc--ccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-----cc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKG--TLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-----RR  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~  233 (260)
                      ......     ...++..+.+|+....  ....++.++|+||+|++++++++|..|+.   ....+..+....     +.
T Consensus       196 ~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~  270 (370)
T cd05596         196 GMVRCD-----TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD  270 (370)
T ss_pred             CcccCC-----CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC
Confidence            111100     0111222222221111  11347889999999999999999998876   344445554321     11


Q ss_pred             --cCCccHHHHHHHHHHhcc
Q psy7935         234 --QNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       234 --~~~~~~~~il~~l~~~~~  251 (260)
                        ..+..+.+++++|...++
T Consensus       271 ~~~~s~~~~~li~~~L~~~p  290 (370)
T cd05596         271 DIEISKQAKDLICAFLTDRE  290 (370)
T ss_pred             cCCCCHHHHHHHHHHccChh
Confidence              124566778888876544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=8.6e-32  Score=227.63  Aligned_cols=223  Identities=20%  Similarity=0.273  Sum_probs=155.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      ..++.++.||+|+||.||+|++.  ++.||||++....       .......+.+|+++++.++|+||+ +++.  ....
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  146 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGE  146 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-------cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence            34778899999999999999984  8999999864321       111245788999999999999999 3332  2233


Q ss_pred             hhhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          91 IQTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        91 ~~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      ++.+++|+.+..+  .....+..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++...........
T Consensus       147 ~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  226 (353)
T PLN00034        147 IQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCN  226 (353)
T ss_pred             EEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccccc
Confidence            4568888877654  22356777888999999999999999999999999999999999999999999876543221110


Q ss_pred             cccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc------HHHHHHHHHhhc----
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWILSSY----  231 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~~~~~----  231 (260)
                            ...++..+    .+++.+       ...+.++|+||||++++++++|..|+.      ...+...+....    
T Consensus       227 ------~~~gt~~y----~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  296 (353)
T PLN00034        227 ------SSVGTIAY----MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEA  296 (353)
T ss_pred             ------ccccCccc----cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCC
Confidence                  01111222    223322       234468999999999999999988864      122222221111    


Q ss_pred             cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +....+.+.+++.+|...++..|.
T Consensus       297 ~~~~~~~l~~li~~~l~~~P~~Rp  320 (353)
T PLN00034        297 PATASREFRHFISCCLQREPAKRW  320 (353)
T ss_pred             CCccCHHHHHHHHHHccCChhhCc
Confidence            122235567777777777776664

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=2.1e-31  Score=222.35  Aligned_cols=218  Identities=17%  Similarity=0.186  Sum_probs=154.5

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee----CCCchhh--
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD----DVQKSAI--   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~----~~~~~~~--   91 (260)
                      +.||+|+||.||+|++.  ++.||+|++......     .......+..|..++..+ .||||+ ++    +....++  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-----QDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-----hccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEE
Confidence            36899999999999984  789999986432211     111234567788888766 699998 22    2222222  


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ++|.+++...   ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.........
T Consensus        76 Ey~~~g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~  152 (320)
T cd05590          76 EFVNGGDLMFHIQKS---RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT  152 (320)
T ss_pred             cCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc
Confidence                 3444444332   35888899999999999999999999999999999999999999999999998643221111


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCcc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQ  238 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~  238 (260)
                      .          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+.   +...++.
T Consensus       153 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  222 (320)
T cd05590         153 T----------STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQD  222 (320)
T ss_pred             c----------cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHH
Confidence            0          011112222333333  446789999999999999999999876   455666665533   2334567


Q ss_pred             HHHHHHHHHHhcccccccc
Q psy7935         239 FETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       239 ~~~il~~l~~~~~~~r~~~  257 (260)
                      +.+++++|...++..|..+
T Consensus       223 ~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         223 AVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHHcccCHHHCCCC
Confidence            7899999999999999865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=1.1e-31  Score=224.97  Aligned_cols=220  Identities=17%  Similarity=0.250  Sum_probs=152.3

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  +++.||+|++.......     ......+.+|..++..+ +||||+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND-----DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEE
Confidence            3689999999999998  48899999865432211     11234577899999888 699999 2221  111222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+++.........  
T Consensus        76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~--  153 (329)
T cd05588          76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT--  153 (329)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc--
Confidence            44443322      2358899999999999999999999999999999999999999999999999986432211111  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH------------HHHHHHHHhhc---c
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF------------RDMFNWILSSY---R  232 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~---~  232 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|++.            ....+.+..+.   +
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  225 (329)
T cd05588         154 --------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP  225 (329)
T ss_pred             --------ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC
Confidence                    011112222333333  4577899999999999999999988741            12233333322   2


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++++|...++..|..
T Consensus       226 ~~~~~~~~~li~~~L~~dP~~R~~  249 (329)
T cd05588         226 RSLSVKASSVLKGFLNKDPKERLG  249 (329)
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCC
Confidence            233456788999999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=3.4e-31  Score=225.18  Aligned_cols=220  Identities=14%  Similarity=0.124  Sum_probs=150.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.+|+|++....     .........+.+|..+++.++||||+ +++.  ...
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            356899999999999999999984  8899999864322     11222245578899999999999999 2211  122


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      .++.+++|+.+..+     ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~  196 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG  196 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC
Confidence            22234444433322     1237788888899999999999999999999999999999999999999999987654322


Q ss_pred             cccccccccccceeeeeeeeeecCcccc------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      ....+         +..++..+.+|+..      ..++.++|+||+|++++++++|..|+.   .......++....   
T Consensus       197 ~~~~~---------~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~  267 (371)
T cd05622         197 MVRCD---------TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT  267 (371)
T ss_pred             ccccc---------CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence            11110         11112222333332      237789999999999999999999887   3344455443211   


Q ss_pred             ----ccCCccHHHHHHHHHH
Q psy7935         233 ----RQNRKQFETVMKTFAE  248 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~  248 (260)
                          ...++.+.+++..|..
T Consensus       268 ~~~~~~~s~~~~~li~~~L~  287 (371)
T cd05622         268 FPDDNDISKEAKNLICAFLT  287 (371)
T ss_pred             CCCcCCCCHHHHHHHHHHcC
Confidence                1224455677777764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=3.6e-31  Score=221.41  Aligned_cols=221  Identities=17%  Similarity=0.214  Sum_probs=150.7

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHH-hhhcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEI-RGLMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++.  ++.+|+|++..+..     ........+..|. .+++.++|+||+ +++.  ....++.++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAI-----LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-----HhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEE
Confidence            46899999999999984  77899998653321     1111123344444 356788999999 2221  112223344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++........... 
T Consensus        76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~-  154 (325)
T cd05602          76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS-  154 (325)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc-
Confidence            44444322      23477888888999999999999999999999999999999999999999999865322211100 


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                               ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.++.+....   +...++.+.+
T Consensus       155 ---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (325)
T cd05602         155 ---------TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARH  225 (325)
T ss_pred             ---------cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHH
Confidence                     11111222233333  457789999999999999999998875   445555554432   2334677889


Q ss_pred             HHHHHHHhcccccccc
Q psy7935         242 VMKTFAEVELRGRKRC  257 (260)
Q Consensus       242 il~~l~~~~~~~r~~~  257 (260)
                      ++++|...++..|...
T Consensus       226 li~~~l~~~p~~R~~~  241 (325)
T cd05602         226 LLEGLLQKDRTKRLGA  241 (325)
T ss_pred             HHHHHcccCHHHCCCC
Confidence            9999999888888753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=2.7e-31  Score=225.09  Aligned_cols=188  Identities=21%  Similarity=0.234  Sum_probs=137.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .+.|++.+.||+|+||.||++++  .|+.||+|.+.....      .......+.+|+.+++.++||||+ +++.   ..
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   93 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ------NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK   93 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc------chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            45688999999999999999998  488999998643211      111245678999999999999999 3332   11


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ..++.+++|+.+...   ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        94 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876          94 SLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             CccccceeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence                 112446666554321   223678888889999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       174 ~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~  223 (359)
T cd07876         174 CTNFMMT-----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ  223 (359)
T ss_pred             ccCccCC-----------CCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence            3221110           01111122333333  457889999999999999999988775

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=3.6e-31  Score=221.22  Aligned_cols=222  Identities=16%  Similarity=0.177  Sum_probs=155.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC-CeE-E----eCCCch
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA-DIC-L----DDVQKS   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~i~-~----~~~~~~   89 (260)
                      |+..+.||+|+||.||+|++  +|+.||+|++.....     ......+.+..|..++..+.|+ +++ +    .+... 
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~-   75 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV-----IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDR-   75 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCE-
Confidence            56789999999999999998  488999998643221     1111234577788888888664 444 2    22222 


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                       ++.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        76 -~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          76 -LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             -EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence             2334444443322      235888999999999999999999999999999999999999999999999998653222


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccC
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQN  235 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~  235 (260)
                      ....          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   .....+.++...   +...
T Consensus       155 ~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~  224 (323)
T cd05615         155 GVTT----------RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSL  224 (323)
T ss_pred             Cccc----------cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccC
Confidence            1110          001111122233333  447889999999999999999998876   445555555533   2334


Q ss_pred             CccHHHHHHHHHHhccccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++.+.+++.+|...++..|..
T Consensus       225 ~~~~~~li~~~l~~~p~~R~~  245 (323)
T cd05615         225 SKEAVSICKGLMTKHPSKRLG  245 (323)
T ss_pred             CHHHHHHHHHHcccCHhhCCC
Confidence            566788899998888888875

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=5.6e-31  Score=216.71  Aligned_cols=222  Identities=20%  Similarity=0.239  Sum_probs=149.6

Q ss_pred             ccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-EeCC---
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-LDDV---   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~~~~---   86 (260)
                      .|++.+.||+|+||.||+|++.   +..||+|.+.........      ...+.+|+.+++.+   +||||+ +++.   
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~   75 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDVCTV   75 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc------hHHHHHHHHHHHhhcccCCCCcceEEEEEec
Confidence            4778899999999999999872   678999986543221111      23345566665554   699999 3321   


Q ss_pred             ----Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          87 ----QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        87 ----~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                          ....+        ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus        76 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Df  154 (290)
T cd07862          76 SRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  154 (290)
T ss_pred             ccCCCCCcEEEEEccCCCCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence                11112        44555554332 334788899999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      |++.........           ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.+..+..
T Consensus       155 g~~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~  223 (290)
T cd07862         155 GLARIYSFQMAL-----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD  223 (290)
T ss_pred             cceEeccCCccc-----------ccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            998765332111           011111122233332  457789999999999999999987765   2223333222


Q ss_pred             hc------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SY------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..                              ....++...+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s  280 (290)
T cd07862         224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS  280 (290)
T ss_pred             HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC
Confidence            10                              0112344578889999888888865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG4236|consensus

Probab=99.97  E-value=6e-31  Score=219.72  Aligned_cols=218  Identities=19%  Similarity=0.285  Sum_probs=166.3

Q ss_pred             ceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhh--
Q psy7935          21 AECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAI--   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~--   91 (260)
                      .+.||+|.||+||-|.+  +|+.||||++.+-.+....      ..++.+|+.+|+.+.||+|+     |....+-++  
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq------esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ------ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCch------HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEe
Confidence            58999999999999998  4999999998765554222      35688999999999999999     333333333  


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC---CcEEEEeecccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~---~~~kl~DFg~~~~~~~~~  164 (260)
                          |+..|-+-... ...+++.....+..||+.||.|||.++|+|+||||+|+|+.+.   -.+||||||+|+......
T Consensus       643 EKl~GDMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  643 EKLHGDMLEMILSSE-KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             hhhcchHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence                55555553333 2358888888899999999999999999999999999999873   479999999999887654


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-HHHHHHHHHhh---c----ccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-FRDMFNWILSS---Y----RRQ  234 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~~---~----~~~  234 (260)
                      -+.           +.+++..+.+|+.+  ..+....||||.|+++|--+.|-.|+. .+++-+++.-.   |    |.+
T Consensus       722 FRr-----------sVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~e  790 (888)
T KOG4236|consen  722 FRR-----------SVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSE  790 (888)
T ss_pred             hhh-----------hhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhh
Confidence            332           22344445566666  668899999999999999999999988 44444554432   2    233


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      -.+..-|+++.|..++.+.|+.
T Consensus       791 is~~AidlIn~LLqVkm~kRys  812 (888)
T KOG4236|consen  791 ISPEAIDLINNLLQVKMRKRYS  812 (888)
T ss_pred             cCHHHHHHHHHHHHHHHHHhcc
Confidence            3466688899999999888873

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=3.9e-31  Score=220.34  Aligned_cols=220  Identities=20%  Similarity=0.224  Sum_probs=148.7

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc-cCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK-CRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++.  ++.||+|++......     .....+.+..|..++.. ..||||+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL-----EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            46899999999999984  778999986533211     11123345566666654 4899999 3221  112222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++..........  
T Consensus        76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~--  153 (316)
T cd05592          76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA--  153 (316)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc--
Confidence            44433322      2257888899999999999999999999999999999999999999999999986543221110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++...+....+   ...++.+.+
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (316)
T cd05592         154 --------STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKD  225 (316)
T ss_pred             --------ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence                    011112223333333  457889999999999999999998876   4444554443322   223456678


Q ss_pred             HHHHHHHhccccccc
Q psy7935         242 VMKTFAEVELRGRKR  256 (260)
Q Consensus       242 il~~l~~~~~~~r~~  256 (260)
                      ++++|...++..|..
T Consensus       226 ll~~~l~~~P~~R~~  240 (316)
T cd05592         226 CLSKLFERDPTKRLG  240 (316)
T ss_pred             HHHHHccCCHHHcCC
Confidence            888888888888764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG2345|consensus

Probab=99.97  E-value=2.8e-31  Score=202.53  Aligned_cols=228  Identities=13%  Similarity=0.152  Sum_probs=166.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE------Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC------LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~------~~   84 (260)
                      ..+++|.+.+.+|+|+|+-||.++.  +++-+|+|.+.-+.        ....+...+|++..++++|||++      +.
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--------~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~   89 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--------QEDIEEALREIDNHRKFNSPNVLRLVDHQLR   89 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--------hHHHHHHHHHHHHHHhhCCcchHHHHHHHHH
Confidence            3457799999999999999999995  68999999865332        11256789999999999999998      11


Q ss_pred             CCC---c-hhh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEE
Q psy7935          85 DVQ---K-SAI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        85 ~~~---~-~~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~k  150 (260)
                      +..   . .++       |+|.++++.... +..+++.+++.|+.++++||++||+..  .+||||||.|||++..+.++
T Consensus        90 ~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~v  169 (302)
T KOG2345|consen   90 EEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPV  169 (302)
T ss_pred             hhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceE
Confidence            111   0 111       888888876554 447999999999999999999999997  99999999999999999999


Q ss_pred             EEeeccccccccccccccccccc---ccceeeeeeeeeec-CccccccccccceeEeecceeeeecccccccc-------
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVL---KRNLTTIIVVAYCW-SKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD-------  219 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~-------  219 (260)
                      |.|||.++...-.-..+.+...+   .+...++.+.+|+. .-+.-..++.++|||||||++|.++.+.-|++       
T Consensus       170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg  249 (302)
T KOG2345|consen  170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG  249 (302)
T ss_pred             EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence            99999987664332222111111   11112222333321 12233668899999999999999888765533       


Q ss_pred             ----------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ----------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ----------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                            ..++++.|+.-.|.+ ||...+++.++..+
T Consensus       250 SlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~q-RP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  250 SLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQ-RPTIPELLSKLDDL  300 (302)
T ss_pred             eEEEeeeccccccCCCCCccHHHHHHHHHHhcCCccc-CCCHHHHHHHHHhh
Confidence                                  457888888866766 67778888777654

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.3e-30  Score=218.42  Aligned_cols=215  Identities=17%  Similarity=0.200  Sum_probs=148.1

Q ss_pred             eccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-E----eCCCchhh--
Q psy7935          24 FKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-L----DDVQKSAI--   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~----~~~~~~~~--   91 (260)
                      ||+|+||.||+|++  +++.||+|++..+..     ...........|..++.+.   .||||+ +    .+....++  
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI-----VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHH-----hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEE
Confidence            69999999999998  489999998643221     1111223455566666655   699998 2    22222222  


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ++|.+++..   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.........
T Consensus        76 e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~  152 (330)
T cd05586          76 DYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT  152 (330)
T ss_pred             cCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC
Confidence                 344444432   235888999999999999999999999999999999999999999999999998653222111


Q ss_pred             cccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc----cCC
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR----QNR  236 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~~  236 (260)
                      .          ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..++.+.+..+...    ...
T Consensus       153 ~----------~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  222 (330)
T cd05586         153 T----------NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLS  222 (330)
T ss_pred             c----------cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence            0          011122223344433   246889999999999999999998875   44555555443221    124


Q ss_pred             ccHHHHHHHHHHhccccccc
Q psy7935         237 KQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.+.+++++|...++..|..
T Consensus       223 ~~~~~li~~~L~~~P~~R~~  242 (330)
T cd05586         223 DEGRQFVKGLLNRNPQHRLG  242 (330)
T ss_pred             HHHHHHHHHHcCCCHHHCCC
Confidence            66788899999888888864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=7.2e-31  Score=218.76  Aligned_cols=218  Identities=16%  Similarity=0.286  Sum_probs=153.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      ...|+..+.||+|+||.||+|++  .+.    .||+|.+....       .....+.+.+|+.+++.++||||+ +++. 
T Consensus         6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~g~~   78 (316)
T cd05108           6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRLLGIC   78 (316)
T ss_pred             hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            44588899999999999999987  333    38888753211       111245788999999999999999 3321 


Q ss_pred             --Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          87 --QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        87 --~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                        ....+       ++|.+++....  ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        79 ~~~~~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a  156 (316)
T cd05108          79 LTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (316)
T ss_pred             cCCCceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccc
Confidence              11111       66777765532  34778888899999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------  219 (260)
                      +.........    .......+.    .+.+|+..  ..++.++|+||||++++++++ |..|++               
T Consensus       157 ~~~~~~~~~~----~~~~~~~~~----~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~  228 (316)
T cd05108         157 KLLGADEKEY----HAEGGKVPI----KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE  228 (316)
T ss_pred             ccccCCCcce----eccCCccce----eecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCC
Confidence            8664332110    000000011    12233332  457889999999999999887 655532               


Q ss_pred             -----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                 ..+++.+|+...+.. |+++.+++..+..+.
T Consensus       229 ~~~~~~~~~~~~~~li~~cl~~~p~~-Rps~~~l~~~l~~~~  269 (316)
T cd05108         229 RLPQPPICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCCCCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                       345666777755554 678888888877654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.97  E-value=1e-30  Score=219.20  Aligned_cols=218  Identities=12%  Similarity=0.126  Sum_probs=150.2

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|++.+.||+|+||.||++++.  ++.||+|++....     .........+.+|..++..+.|++|+     +.+....
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~   76 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-----MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYL   76 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            5778999999999999999984  7889999864321     11122234578889999999999998     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~Ey~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          77 YLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             EEEEeCCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            22       4555555432  23578888899999999999999999999999999999999999999999999876543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-  231 (260)
                      .......     .    ..+...+.+|+..       ..++.++|+||+|++++++++|..|+.   ..+....+.... 
T Consensus       155 ~~~~~~~-----~----~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~  225 (331)
T cd05624         155 DGTVQSS-----V----AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE  225 (331)
T ss_pred             CCceeec-----c----ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC
Confidence            2211100     0    0111122233322       346788999999999999999999876   344444444321 


Q ss_pred             ----cc---cCCccHHHHHHHHHHhc
Q psy7935         232 ----RR---QNRKQFETVMKTFAEVE  250 (260)
Q Consensus       232 ----~~---~~~~~~~~il~~l~~~~  250 (260)
                          +.   ..+..+.+++.+|....
T Consensus       226 ~~~~p~~~~~~~~~~~~li~~ll~~~  251 (331)
T cd05624         226 RFQFPSHITDVSEEAKDLIQRLICSR  251 (331)
T ss_pred             cccCCCccccCCHHHHHHHHHHccCc
Confidence                11   12355677777776543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=4.1e-31  Score=225.00  Aligned_cols=187  Identities=19%  Similarity=0.273  Sum_probs=133.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCCCc---
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDVQK---   88 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~~~---   88 (260)
                      |++.+.||+|+||.||++.+  +|+.||+|.+.... .     .....+.+.+|+++++.++|+||+ +   +....   
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   75 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-Q-----NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP   75 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-c-----chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc
Confidence            67789999999999999997  48999999853221 1     111235688999999999999998 2   22111   


Q ss_pred             -hhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 -SAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 -~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                       ..++.+++|+.....     ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~  155 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP  155 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence             022334444332110     23588899999999999999999999999999999999999999999999999875433


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......     .    .......+.+|+..   ..++.++|+||+|++++++++|+.|+.
T Consensus       156 ~~~~~~-----~----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  206 (372)
T cd07853         156 DESKHM-----T----QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ  206 (372)
T ss_pred             CccccC-----C----CCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence            211100     0    00111122233332   236788999999999999999987764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=3.2e-31  Score=224.35  Aligned_cols=188  Identities=20%  Similarity=0.227  Sum_probs=137.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .+.|++.+.||+|+||.||++.+  .++.||+|.+.....      .......+.+|+.+++.++||||+ +++.   ..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   89 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK   89 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc------ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence            45688999999999999999997  488999998543211      111245678899999999999998 3321   11


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ...+.+++|+.+...   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        90 ~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          90 SLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             cccccceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence                 112456677655321   234678888899999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       170 ~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  219 (355)
T cd07874         170 GTSFMMT-----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  219 (355)
T ss_pred             CCccccC-----------CccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            3322110           01112222333333  357889999999999999999987764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0194|consensus

Probab=99.97  E-value=1.2e-30  Score=221.23  Aligned_cols=222  Identities=18%  Similarity=0.200  Sum_probs=159.3

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc---C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL---G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L   83 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~---~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~   83 (260)
                      |+...+.....++||+|+||.||+|+..   +   .+||+|....+.     .........+.+|+.++++++||||+ +
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-----~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-----ELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-----cccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4444555666799999999999999983   2   238999743211     12233467899999999999999999 6


Q ss_pred             eCC--Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          84 DDV--QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        84 ~~~--~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                      ++.  ....+         |+|.+||....  ..++..+...++.+++.||+|||+++++||||-.+|+|++.++.+||+
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~--~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS  304 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNK--KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS  304 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence            653  22222         67777776653  358888889999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeeccc-ccc-----------
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTE-DKA-----------  217 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~-~~~-----------  217 (260)
                      |||++..-..-..        ...   ..-.+- |.+|+.+  ..+++++|+||||+++||+.+. ..|           
T Consensus       305 DFGLs~~~~~~~~--------~~~---~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~  373 (474)
T KOG0194|consen  305 DFGLSRAGSQYVM--------KKF---LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA  373 (474)
T ss_pred             ccccccCCcceee--------ccc---cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH
Confidence            9999865431100        000   000111 2344544  4688999999999999998873 322           


Q ss_pred             ----------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         218 ----------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       218 ----------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                      .....++++|+...+.. |+++.++.+.++.+..
T Consensus       374 kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~-R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  374 KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPED-RPTMSTIKKKLEALEK  422 (474)
T ss_pred             HHHhcCccCCCCCCCHHHHHHHHHHhccCChhh-ccCHHHHHHHHHHHHh
Confidence                            22556677777755554 7888888888876653

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.1e-31  Score=216.10  Aligned_cols=223  Identities=13%  Similarity=0.149  Sum_probs=156.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQ   92 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~   92 (260)
                      |++.+.||+|+||.||++.+  +++.||+|.+......     .......+.+|+.+++.++|+||+ +.+.  ....++
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   76 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-----hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEE
Confidence            66789999999999999998  4889999986433221     111235678899999999999999 3221  112232


Q ss_pred             hHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          93 TLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        93 ~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      .+++|+.+..+        ...+++..+..++.|++.||+|||+++++||||||+||++++++.++|+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence            34444433222        2357889999999999999999999999999999999999999999999999987653322


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHh---hcc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILS---SYR  232 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~  232 (260)
                      ....       ...+.    .+.+|+..  ..++.++|+||+|++++++++|..|+..       .++...+..   .++
T Consensus       157 ~~~~-------~~~~~----~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
T cd05605         157 TIRG-------RVGTV----GYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYS  225 (285)
T ss_pred             cccc-------ccCCC----CccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccC
Confidence            1110       01111    12223322  4577889999999999999999988762       122222222   122


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...+..+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~li~~~l~~~P~~R~~  249 (285)
T cd05605         226 EKFSEAARSICRQLLTKDPGFRLG  249 (285)
T ss_pred             cccCHHHHHHHHHHccCCHHHhcC
Confidence            234567788999999999988884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=6.1e-31  Score=238.92  Aligned_cols=199  Identities=18%  Similarity=0.166  Sum_probs=136.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||+|++......     .....+++.+|+.++++++|||++ +++    ...
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~-----~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSE-----NPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccccc-----CHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCE
Confidence            3578899999999999999998  4889999986432211     112246789999999999999999 322    122


Q ss_pred             hhh-------hhHHHhhccCc--------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          89 SAI-------QTLISNLDSQN--------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~--------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      .++       ++|.+++....        .....+...+..++.|++.||+|||++||+||||||+|||++.++.++|+|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            111       34444443210        012245567788999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccc--------cccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDL--------YVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++.......+...+.        +..........++..+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~  232 (932)
T PRK13184        157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR  232 (932)
T ss_pred             cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            99997663221111000        0000000111222223344433  457889999999999999999987753

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=6.8e-31  Score=217.70  Aligned_cols=184  Identities=17%  Similarity=0.188  Sum_probs=128.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc------------------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL------------------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~------------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      .+.|.+.+.||+|+||.||+|.+.                  +..||+|.+....       .......+.+|+.++.++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l   76 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-------NKNARNDFLKEVKILSRL   76 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-------CHHHHHHHHHHHHHHhhc
Confidence            456778899999999999999852                  3369999754321       111246789999999999


Q ss_pred             CCCCeE-EeC----CCchhh-------hhHHHhhccCcc----------------cccchHHHHHHHHHHHHHHHHHhhh
Q psy7935          77 RMADIC-LDD----VQKSAI-------QTLISNLDSQNI----------------TRENISDIIKLLSIEIGTTLSVMHS  128 (260)
Q Consensus        77 ~h~~i~-~~~----~~~~~~-------~~l~~~l~~~~~----------------~~~~~~~~~~~i~~~i~~~l~~LH~  128 (260)
                      +||||+ +++    ....++       ++|.+++.....                ...+++..+..++.|++.||+|||+
T Consensus        77 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~  156 (304)
T cd05096          77 KDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS  156 (304)
T ss_pred             CCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            999999 322    222222       455555533211                1235677888999999999999999


Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGL  206 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~  206 (260)
                      +||+||||||+|||++.++.+||+|||+++.........    ..+....+.    .+.+|+..  ..+++++|+||||+
T Consensus       157 ~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~----~~~~~~~~~----~y~aPE~~~~~~~~~~~Dv~slG~  228 (304)
T cd05096         157 LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYR----IQGRAVLPI----RWMAWECILMGKFTTASDVWAFGV  228 (304)
T ss_pred             CCccccCcchhheEEcCCccEEECCCccceecccCceeE----ecCcCCCCc----cccCHHHHhcCCCCchhhhHHHHH
Confidence            999999999999999999999999999987553322110    000000011    12233322  45788999999999


Q ss_pred             eeeeecc
Q psy7935         207 SQIKVST  213 (260)
Q Consensus       207 ~~~~~~~  213 (260)
                      +++++++
T Consensus       229 ~l~el~~  235 (304)
T cd05096         229 TLWEILM  235 (304)
T ss_pred             HHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0586|consensus

Probab=99.97  E-value=4e-31  Score=224.14  Aligned_cols=221  Identities=14%  Similarity=0.169  Sum_probs=172.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCCCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDVQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~~~   88 (260)
                      ...|.+...||.|.|+.|..+++  ++.+||||.+.+.......      .+.+.+|++++..++||||+ +   +....
T Consensus        55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~------~~k~~rev~imk~l~HPnIvkl~~v~~t~~  128 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK------RQKLGREVDIMKSLNHPNIVKLFSVIETEA  128 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH------HHHHHHHHHHHHhcCCcceeeeeeeeeecc
Confidence            45688999999999999999998  5999999987655443222      34588999999999999998 2   22222


Q ss_pred             h-hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 S-AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~-~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      . ++       +.+++|+....   .+.+..+..++.|+..|++|||+++|+|||||++|+|++.+..+||+|||++..+
T Consensus       129 ~lylV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  129 TLYLVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF  205 (596)
T ss_pred             eeEEEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee
Confidence            1 11       88888887654   4555888899999999999999999999999999999999999999999999877


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY--  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~--  231 (260)
                      ....-           . ....+.++++++++    .+..+++|+||+|+++|-++.|..|++   ..++-.+++.+.  
T Consensus       206 ~~~~~-----------l-qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r  273 (596)
T KOG0586|consen  206 DYGLM-----------L-QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR  273 (596)
T ss_pred             ccccc-----------c-cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeec
Confidence            64321           1 12233444444433    578899999999999999999999999   677778887764  


Q ss_pred             -cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 -RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 -~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       +..-..++++++.++..++++.|..
T Consensus       274 Ip~~ms~dce~lLrk~lvl~Pskr~~  299 (596)
T KOG0586|consen  274 IPFYMSCDCEDLLRKFLVLNPSKRGP  299 (596)
T ss_pred             ccceeechhHHHHHHhhccCccccCC
Confidence             2333577899999998888877754

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=1.9e-30  Score=213.28  Aligned_cols=221  Identities=20%  Similarity=0.232  Sum_probs=149.6

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-EeCCC----
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-LDDVQ----   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~~~~~----   87 (260)
                      |++.+.||+|+||.||+|++  +++.||+|.+........ .     ...+.+|+++++.+   +||||+ +++..    
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~-----~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~   75 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG-L-----PLSTVREVALLKRLEAFDHPNIVRLMDVCATSR   75 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC-C-----chHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence            67789999999999999998  488999998654322111 1     12345566666554   799999 33221    


Q ss_pred             ---chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 ---KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 ---~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                         ...+        +++.+++.... ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+
T Consensus        76 ~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863          76 TDRETKVTLVFEHVDQDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             CCCCceEEEEEcccccCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCc
Confidence               1111        44555554432 23478999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh-
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS-  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~-  230 (260)
                      +..........           ...+...+.+|+..  ..++.++|+||+|+++++++++..|+.   ..+.+..+... 
T Consensus       155 ~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~  223 (288)
T cd07863         155 ARIYSCQMALT-----------PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI  223 (288)
T ss_pred             cccccCcccCC-----------CccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHh
Confidence            87654321110           00111112233333  457889999999999999999876654   22222222210 


Q ss_pred             -----------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -----------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -----------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                   .....+..+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  278 (288)
T cd07863         224 GLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS  278 (288)
T ss_pred             CCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC
Confidence                                         00112344578999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=5.5e-31  Score=223.60  Aligned_cols=188  Identities=20%  Similarity=0.224  Sum_probs=136.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .+.|++.+.||+|+||.||++.+  .++.||||++.....      .......+.+|+.+++.++||||+ +++.   ..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~   96 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc------CchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence            45688999999999999999998  488999998543211      111235678899999999999999 3321   11


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ...+.+++|+.+...   ...++...+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875          97 SLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             cccccCeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence                 112445565544221   223677888889999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       177 ~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  226 (364)
T cd07875         177 GTSFMMT-----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  226 (364)
T ss_pred             CCCCccc-----------CCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence            3321110           01111122233332  457889999999999999999988765

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=5.8e-31  Score=223.99  Aligned_cols=192  Identities=17%  Similarity=0.173  Sum_probs=133.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-E
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-L   83 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~   83 (260)
                      .+.+.|++.+.||+|+||.||+|++.       +..||+|.+.....       ......+.+|+.+++.+ +|+||+ +
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-------TDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-------HHHHHHHHHHHHHHHhhccCCceeeE
Confidence            44556889999999999999999862       35799998543211       11245688999999999 899999 3


Q ss_pred             eCC----Cchhh-------hhHHHhhccCc--------------------------------------------------
Q psy7935          84 DDV----QKSAI-------QTLISNLDSQN--------------------------------------------------  102 (260)
Q Consensus        84 ~~~----~~~~~-------~~l~~~l~~~~--------------------------------------------------  102 (260)
                      ++.    ...++       ++|.+++....                                                  
T Consensus       108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (374)
T cd05106         108 LGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV  187 (374)
T ss_pred             eeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence            332    11111       44555443210                                                  


Q ss_pred             -----------------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935         103 -----------------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus       103 -----------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                                       ....+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~  267 (374)
T cd05106         188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN  267 (374)
T ss_pred             cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence                             012367788899999999999999999999999999999999999999999999875533211


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      ..    ..+.    ......+.+|+..  ..++.++|+||+|++++++++ |..|+.
T Consensus       268 ~~----~~~~----~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~  316 (374)
T cd05106         268 YV----VKGN----ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYP  316 (374)
T ss_pred             ee----eccC----CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence            10    0000    0011113334433  458899999999999999986 776653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=8.2e-31  Score=219.40  Aligned_cols=220  Identities=16%  Similarity=0.236  Sum_probs=152.4

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  +++.+|+|++......     .......+.+|..++.++ .||+|+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-----DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEE
Confidence            3689999999999998  4789999986543221     112245678899988888 699998 2221  112222344


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.........  
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--  153 (327)
T cd05617          76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT--  153 (327)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce--
Confidence            44443322      2358899999999999999999999999999999999999999999999999986432211110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---------H-HHHHHHHHhh---cccc
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---------F-RDMFNWILSS---YRRQ  234 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---------~-~~~~~~~~~~---~~~~  234 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.         . ....+.....   .+..
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  225 (327)
T cd05617         154 --------STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRF  225 (327)
T ss_pred             --------ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCC
Confidence                    011122223334433  457889999999999999999999874         1 2233333322   2223


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..+.+++++|...+++.|..
T Consensus       226 ~~~~~~~li~~~L~~dP~~R~~  247 (327)
T cd05617         226 LSVKASHVLKGFLNKDPKERLG  247 (327)
T ss_pred             CCHHHHHHHHHHhccCHHHcCC
Confidence            3456789999999999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=1.3e-30  Score=211.25  Aligned_cols=224  Identities=17%  Similarity=0.205  Sum_probs=153.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ...+.|++.++||+|++|.||+|... +..|++|.+....     .    ..+.+.+|+.++++++|+|++ +.    +.
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-----~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   73 (261)
T cd05072           3 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-----M----SVQAFLEEANLMKTLQHDKLVRLYAVVTKE   73 (261)
T ss_pred             CchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-----h----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            44567889999999999999999974 6789999753221     1    135788999999999999999 22    11


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ...++...+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++..
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~  152 (261)
T cd05072          74 EPIYIITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARV  152 (261)
T ss_pred             CCcEEEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCcccee
Confidence            21111       55666654332 33577788888999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYRR  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~  233 (260)
                      ..........     ....+.    .+.+|+..  ..+++++|+||+|++++++++ |..|+.   ..+....+..+...
T Consensus       153 ~~~~~~~~~~-----~~~~~~----~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~  223 (261)
T cd05072         153 IEDNEYTARE-----GAKFPI----KWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM  223 (261)
T ss_pred             cCCCceeccC-----CCccce----ecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC
Confidence            5432211100     000111    12233322  457788999999999999998 777653   33344443333221


Q ss_pred             ----cCCccHHHHHHHHHHhcccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~  255 (260)
                          ..+..+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rp  249 (261)
T cd05072         224 PRMENCPDELYDIMKTCWKEKAEERP  249 (261)
T ss_pred             CCCCCCCHHHHHHHHHHccCCcccCc
Confidence                1134556666666666666664

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-30  Score=217.26  Aligned_cols=216  Identities=13%  Similarity=0.160  Sum_probs=150.0

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .|++.+.||+|+||.||++++  +++.||+|++....     .......+.+.+|..++..++|+||+ +    .+....
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   76 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-----MLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNL   76 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeE
Confidence            477899999999999999998  48899999864211     11222245688899999999999998 2    222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          77 YLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             EEEEecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            22       4555555332  23578889999999999999999999999999999999999999999999999865443


Q ss_pred             cccccccccccccceeeeeeeee-ecCcccc-------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      .......          ...+.+ +.+|+..       ..++.++|+||+|++++++++|..|+.   ..+....++...
T Consensus       155 ~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~  224 (331)
T cd05597         155 DGTVQSN----------VAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK  224 (331)
T ss_pred             CCCcccc----------ceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC
Confidence            2211110          011122 2233322       346778999999999999999999876   344444444321


Q ss_pred             c-----c---cCCccHHHHHHHHHHh
Q psy7935         232 R-----R---QNRKQFETVMKTFAEV  249 (260)
Q Consensus       232 ~-----~---~~~~~~~~il~~l~~~  249 (260)
                      .     .   ..+..+.+++++|...
T Consensus       225 ~~~~~~~~~~~~~~~~~~li~~ll~~  250 (331)
T cd05597         225 EHFQFPPDVTDVSEEAKDLIRRLICS  250 (331)
T ss_pred             CcccCCCccCCCCHHHHHHHHHHccC
Confidence            1     1   1245567777777643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=1e-30  Score=217.86  Aligned_cols=220  Identities=19%  Similarity=0.194  Sum_probs=151.0

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc-cCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK-CRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++  +|+.||+|.+......     ..........|..++.. ..||||+ +++.  ....++.++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL-----IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEE
Confidence            4689999999999998  4889999986543211     01113445667777765 4899998 2221  122233345


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      ||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..........  
T Consensus        76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--  153 (316)
T cd05620          76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA--  153 (316)
T ss_pred             CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce--
Confidence            55444332      2357888899999999999999999999999999999999999999999999986432111110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+....+   ....+.+.+
T Consensus       154 --------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (316)
T cd05620         154 --------STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKD  225 (316)
T ss_pred             --------eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence                    011112222333333  457889999999999999999998875   4445555443322   223456788


Q ss_pred             HHHHHHHhccccccc
Q psy7935         242 VMKTFAEVELRGRKR  256 (260)
Q Consensus       242 il~~l~~~~~~~r~~  256 (260)
                      ++++|...++..|..
T Consensus       226 li~~~l~~dP~~R~~  240 (316)
T cd05620         226 ILEKLFERDPTRRLG  240 (316)
T ss_pred             HHHHHccCCHHHcCC
Confidence            899998888888865

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=1.7e-30  Score=213.31  Aligned_cols=185  Identities=17%  Similarity=0.219  Sum_probs=131.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      +.+|++++.||+|+||.||.++.      .+..|++|.+....  .     ......+.+|+.++++++|||++ +.+  
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   75 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--G-----GNHIADLKKEIEILRNLYHENIVKYKGIC   75 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--c-----HHHHHHHHHHHHHHHhCCCCCeeeeeeEE
Confidence            45688999999999999999974      37889999853221  1     11235688999999999999999 322  


Q ss_pred             --CCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 --VQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 --~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                        ......         ++|.+++...  ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+||
T Consensus        76 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~df  153 (284)
T cd05079          76 TEDGGNGIKLIMEFLPSGSLKEYLPRN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDF  153 (284)
T ss_pred             ecCCCCceEEEEEccCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCC
Confidence              212223         4444444322  124788888999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      |++..........    ...   ....+...+.+|+..  ..++.++|+||+|+++++++++.
T Consensus       154 g~~~~~~~~~~~~----~~~---~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~  209 (284)
T cd05079         154 GLTKAIETDKEYY----TVK---DDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC  209 (284)
T ss_pred             ccccccccCccce----eec---CCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC
Confidence            9987654332210    000   001111122333332  45778999999999999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=3.3e-30  Score=216.18  Aligned_cols=217  Identities=12%  Similarity=0.138  Sum_probs=150.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|++.+.||+|+||.||++++.  ++.+|+|++....     .........+.+|..++..++|++|+     +.+....
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   76 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNL   76 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEE
Confidence            4778899999999999999984  7789999853211     11222234578899999999999998     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus        77 ~lv~ey~~~g~L~~~l~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          77 YLVMDYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             EEEEeccCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            22       5566665432  23578888899999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (260)
                      .......     ...++.    .+.+|+..       ..++.++|+||+|++++++++|..|+.   ..+....+.....
T Consensus       155 ~~~~~~~-----~~~gt~----~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~  225 (332)
T cd05623         155 DGTVQSS-----VAVGTP----DYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE  225 (332)
T ss_pred             CCcceec-----ccccCc----cccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc
Confidence            2111100     011111    22233322       347889999999999999999999876   3445555544221


Q ss_pred             --------ccCCccHHHHHHHHHHh
Q psy7935         233 --------RQNRKQFETVMKTFAEV  249 (260)
Q Consensus       233 --------~~~~~~~~~il~~l~~~  249 (260)
                              ...++.+.+++++|...
T Consensus       226 ~~~~p~~~~~~s~~~~~li~~ll~~  250 (332)
T cd05623         226 RFQFPAQVTDVSEDAKDLIRRLICS  250 (332)
T ss_pred             cccCCCccccCCHHHHHHHHHHccC
Confidence                    12245667788877643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.4e-30  Score=219.48  Aligned_cols=182  Identities=20%  Similarity=0.244  Sum_probs=134.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ----   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~----   87 (260)
                      .+.|++++.||+|+||.||+|.+  +++.||||.+....      ........+.+|+.++++++||||+ +++..    
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF------QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT   87 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh------hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence            35688899999999999999997  47899999853221      1111235677899999999999999 32211    


Q ss_pred             ------chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          88 ------KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        88 ------~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                            ..++      ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        88 ~~~~~~~~~~~~~~~~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg  163 (343)
T cd07878          88 SIENFNEVYLVTNLMGADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG  163 (343)
T ss_pred             cccccCcEEEEeecCCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCc
Confidence                  0111      4444444332    48889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++........             +..+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       164 ~~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  217 (343)
T cd07878         164 LARQADDEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP  217 (343)
T ss_pred             cceecCCCcC-------------CccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence            9875433211             11112223344433   347889999999999999999987764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=8.2e-31  Score=218.58  Aligned_cols=221  Identities=18%  Similarity=0.227  Sum_probs=154.4

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|++.  ++.||+|++.....     ........+.+|..++..+ +||||+ +++.  ....++.++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI-----LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH-----hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEE
Confidence            46899999999999984  78999998653321     1112234567888888877 699999 3332  122233355


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++..........  
T Consensus        76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--  153 (318)
T cd05570          76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT--  153 (318)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc--
Confidence            55444332      2258889999999999999999999999999999999999999999999999986432211110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  241 (260)
                              ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+.....   ...++.+.+
T Consensus       154 --------~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  225 (318)
T cd05570         154 --------STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKS  225 (318)
T ss_pred             --------cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence                    011111222333333  457889999999999999999998876   4444454444332   233567789


Q ss_pred             HHHHHHHhcccccccc
Q psy7935         242 VMKTFAEVELRGRKRC  257 (260)
Q Consensus       242 il~~l~~~~~~~r~~~  257 (260)
                      ++++|...++..|...
T Consensus       226 li~~~l~~dP~~R~s~  241 (318)
T cd05570         226 ILKSFLTKNPEKRLGC  241 (318)
T ss_pred             HHHHHccCCHHHcCCC
Confidence            9999999998888754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=1.5e-30  Score=216.20  Aligned_cols=185  Identities=18%  Similarity=0.231  Sum_probs=133.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|.+.+.||+|+||.||+|++  .++.||+|.+.......       ....+.+|+.++++++|||++ +++    ...
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   78 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIVHTDKS   78 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-------cchhHHHHHHHHHhCCCCCcceEEEEEeeCCe
Confidence            4578899999999999999998  47889999865332111       123567899999999999999 222    222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      +++.+++...  ...++...+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        79 ~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  156 (309)
T cd07872          79 LTLVFEYLDKDLKQYMDDC--GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV  156 (309)
T ss_pred             EEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCC
Confidence            222      3444444322  23478888888999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       157 ~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~  206 (309)
T cd07872         157 PTKTYS----------NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFP  206 (309)
T ss_pred             Cccccc----------cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            211110          01112223334333   346789999999999999999987764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=3.6e-31  Score=222.35  Aligned_cols=224  Identities=15%  Similarity=0.190  Sum_probs=152.6

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC   82 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~   82 (260)
                      |+.+.++|++.+.||+|+||.||+|.+.       ++.||+|++....     ..  ...+.+.+|++++.++ .|+||+
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-----~~--~~~~~~~~E~~~~~~l~~h~niv   74 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-----TA--SEYKALMTELKILIHIGHHLNVV   74 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-----CH--HHHHHHHHHHHHHHhhccCcchh
Confidence            4566778999999999999999999752       4689999753211     11  1134677899999999 799999


Q ss_pred             -EeC---CCchhh---------hhHHHhhccCcc----------------------------------------------
Q psy7935          83 -LDD---VQKSAI---------QTLISNLDSQNI----------------------------------------------  103 (260)
Q Consensus        83 -~~~---~~~~~~---------~~l~~~l~~~~~----------------------------------------------  103 (260)
                       +.+   .....+         ++|.+++.....                                              
T Consensus        75 ~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (337)
T cd05054          75 NLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLS  154 (337)
T ss_pred             heeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchh
Confidence             332   122222         455555432110                                              


Q ss_pred             ------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccc
Q psy7935         104 ------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLY  171 (260)
Q Consensus       104 ------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~  171 (260)
                                  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..........    
T Consensus       155 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~----  230 (337)
T cd05054         155 DVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV----  230 (337)
T ss_pred             hcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh----
Confidence                        1247888899999999999999999999999999999999999999999999997653221100    


Q ss_pred             ccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---------------------------HH
Q psy7935         172 VLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------------------FR  221 (260)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------------------~~  221 (260)
                      ..+....+.    .+.+|+..  ..++.++|+||+|++++++++ |..|+.                           ..
T Consensus       231 ~~~~~~~~~----~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd05054         231 RKGDARLPL----KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIY  306 (337)
T ss_pred             hccCCCCCc----cccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHH
Confidence            000000011    12233322  557889999999999999987 766542                           23


Q ss_pred             HHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         222 DMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      +++.+|+...+.. ||++.++++.|..+-
T Consensus       307 ~l~~~cl~~~p~~-RPs~~ell~~l~~~~  334 (337)
T cd05054         307 SIMLDCWHNNPED-RPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence            4555666644554 567777777776543

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=1.5e-30  Score=221.55  Aligned_cols=190  Identities=17%  Similarity=0.181  Sum_probs=132.0

Q ss_pred             cccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD   84 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~   84 (260)
                      +.+.|++.+.||+|+||.||+|++       .+..||||++.....       ....+.+.+|+.++..+ +||||+ +.
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~Ei~il~~l~~HpnIv~l~  105 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-------LTEREALMSELKVLSYLGNHINIVNLL  105 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-------cHHHHHHHHHHHHHHHhcCCcceeeee
Confidence            345688899999999999999974       256899998642211       11245788999999999 899999 33


Q ss_pred             C----CCchhh-------hhHHHhhccCcc--------------------------------------------------
Q psy7935          85 D----VQKSAI-------QTLISNLDSQNI--------------------------------------------------  103 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~~--------------------------------------------------  103 (260)
                      +    ....++       ++|.+++.....                                                  
T Consensus       106 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  185 (375)
T cd05104         106 GACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADK  185 (375)
T ss_pred             eeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccc
Confidence            2    222111       445555432110                                                  


Q ss_pred             ----------------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         104 ----------------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       104 ----------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                                            ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~  265 (375)
T cd05104         186 RRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIR  265 (375)
T ss_pred             ccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceecc
Confidence                                  1136778889999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ........    +....    ...+.+|+..  ..++.++|+||||++++++++ +..|+
T Consensus       266 ~~~~~~~~----~~~~~----~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~  317 (375)
T cd05104         266 NDSNYVVK----GNARL----PVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPY  317 (375)
T ss_pred             Cccccccc----CCCCC----CcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCC
Confidence            32211100    00000    0112233333  457889999999999999987 55443

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0584|consensus

Probab=99.97  E-value=1.5e-31  Score=227.19  Aligned_cols=214  Identities=18%  Similarity=0.223  Sum_probs=161.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      .+....+.||+|+|-+||+|.+.  |-+||.-.+....+    .......++|..|+..|+.++||||+     |.+...
T Consensus        40 Ry~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~----~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n  115 (632)
T KOG0584|consen   40 RYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDV----TQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN  115 (632)
T ss_pred             ceeehhhhcccccceeeeeccccccchhhHHHHHhHHHh----hcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC
Confidence            34566799999999999999984  77777544322221    12222357899999999999999999     555544


Q ss_pred             hhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC--CceecCCCCCcEEEcc-CCcEEEEeecc
Q psy7935          89 SAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN--NIIHGDLTTSNMILSS-DHHLVMIDFGL  156 (260)
Q Consensus        89 ~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--~i~H~dlkp~Nill~~-~~~~kl~DFg~  156 (260)
                      ..+         |+|.+|.....   .+..+.+..|++||+.||.|||++  .|+|||||.+||+|++ -|.|||+|+|+
T Consensus       116 ~~in~iTEL~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGL  192 (632)
T KOG0584|consen  116 KTINFITELFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGL  192 (632)
T ss_pred             ceeeeeeecccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhH
Confidence            333         99999997754   688899999999999999999998  6999999999999998 68999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeec-Ccccc-ccccccceeEeecceeeeecccccccc----HHHHHHHHHhh
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSS  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~  230 (260)
                      |+....+..+            . +-|.|+| +|+-+ ..|+..+||||||+.++||+|+..|..    ..++..++.+|
T Consensus       193 Atl~r~s~ak------------s-vIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SG  259 (632)
T KOG0584|consen  193 ATLLRKSHAK------------S-VIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSG  259 (632)
T ss_pred             HHHhhccccc------------e-eccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcC
Confidence            9887665322            1 2334444 34433 669999999999999999999998866    56666666666


Q ss_pred             cccc-----CCccHHHHHHHHHHh
Q psy7935         231 YRRQ-----NRKQFETVMKTFAEV  249 (260)
Q Consensus       231 ~~~~-----~~~~~~~il~~l~~~  249 (260)
                      ..+.     ..|...+++.+|...
T Consensus       260 iKP~sl~kV~dPevr~fIekCl~~  283 (632)
T KOG0584|consen  260 IKPAALSKVKDPEVREFIEKCLAT  283 (632)
T ss_pred             CCHHHhhccCCHHHHHHHHHHhcC
Confidence            5322     135556666666544

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=2.1e-30  Score=212.56  Aligned_cols=187  Identities=17%  Similarity=0.214  Sum_probs=130.8

Q ss_pred             cCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----C
Q psy7935          18 LQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----V   86 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~   86 (260)
                      ++..+.||+|+||.||++..      .+..||+|.+.....       ......+.+|++++++++|||++ +.+    .
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-------QQNTSGWKKEINILKTLYHENIVKYKGCCSEQ   78 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            47889999999999988753      367899998543211       11245688999999999999999 332    2


Q ss_pred             CchhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          87 QKSAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ....++.+++|+.+..+     ...+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++....
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080          79 GGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             CCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence            22222233344333222     1248889999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ......    ......   .....+.+|+..  ..++.++|+||+|++++++++|..|+
T Consensus       159 ~~~~~~----~~~~~~---~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~  210 (283)
T cd05080         159 EGHEYY----RVREDG---DSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSK  210 (283)
T ss_pred             Ccchhh----ccCCCC---CCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCC
Confidence            322110    000000   001112233322  45788999999999999999986553

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=2.3e-30  Score=215.73  Aligned_cols=182  Identities=16%  Similarity=0.236  Sum_probs=128.4

Q ss_pred             ceeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh
Q psy7935          21 AECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~   91 (260)
                      ..+||+|+||.||+|++.    ++.+|+|.+.....          ...+.+|+.++++++||||+ +.+    .....+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   75 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHADRKV   75 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEE
Confidence            578999999999999963    57899998643211          23467899999999999998 322    222222


Q ss_pred             --------hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc----cCCcEEEEe
Q psy7935          92 --------QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS----SDHHLVMID  153 (260)
Q Consensus        92 --------~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~----~~~~~kl~D  153 (260)
                              ++|.+++.....      ...+++..+..++.|++.||+|||++||+||||||+|||++    .++.+||+|
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~D  155 (317)
T cd07868          76 WLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD  155 (317)
T ss_pred             EEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEee
Confidence                    444444432111      22478899999999999999999999999999999999994    467999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++...........+.       ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 fG~a~~~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         156 MGFARLFNSPLKPLADL-------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cCceeccCCCCcccccc-------CCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence            99997654332111110       011122223344433   347888999999999999999987753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=1.9e-30  Score=216.20  Aligned_cols=217  Identities=18%  Similarity=0.193  Sum_probs=149.1

Q ss_pred             eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc-cCCCCeE-E----eCCCchhh--
Q psy7935          22 ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK-CRMADIC-L----DDVQKSAI--   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~-~----~~~~~~~~--   91 (260)
                      +.||+|+||.||+|++.  ++.||+|++.......     ......+..|..++.. ..||||+ +    .+....++  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-----DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----cchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEE
Confidence            46899999999999984  7889999865432110     1112345667777765 4899998 2    22222222  


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ++|.+++...   ..+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++.........
T Consensus        76 ey~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  152 (316)
T cd05619          76 EYLNGGDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK  152 (316)
T ss_pred             eCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc
Confidence                 4455554332   24788888899999999999999999999999999999999999999999998643221111


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCCcc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNRKQ  238 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~  238 (260)
                      .          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+....+   ......
T Consensus       153 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  222 (316)
T cd05619         153 T----------CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTRE  222 (316)
T ss_pred             e----------eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHH
Confidence            0          011111222333333  457889999999999999999998875   4455554443322   223456


Q ss_pred             HHHHHHHHHHhccccccc
Q psy7935         239 FETVMKTFAEVELRGRKR  256 (260)
Q Consensus       239 ~~~il~~l~~~~~~~r~~  256 (260)
                      +.+++.+|...++..|..
T Consensus       223 ~~~li~~~l~~~P~~R~~  240 (316)
T cd05619         223 AKDILVKLFVREPERRLG  240 (316)
T ss_pred             HHHHHHHHhccCHhhcCC
Confidence            678888888888888864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=2.7e-30  Score=212.23  Aligned_cols=222  Identities=13%  Similarity=0.136  Sum_probs=156.6

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |+..+.||+|+||.||++.+.  ++.+|+|.+.......     ......+.+|+.++++++|++++ +.    +....+
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~   76 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----RKGESMALNEKQILEKVNSRFVVSLAYAYETKDALC   76 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc-----hHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEE
Confidence            556789999999999999984  8899999865433221     11234577899999999999999 22    222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++......
T Consensus        77 lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          77 LVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            2       44544443222 234788889999999999999999999999999999999999999999999998654322


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH------HHHHHHHH----hhc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF------RDMFNWIL----SSY  231 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~------~~~~~~~~----~~~  231 (260)
                      ....           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+..      .+....+.    ...
T Consensus       156 ~~~~-----------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
T cd05630         156 QTIK-----------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEY  224 (285)
T ss_pred             cccc-----------CCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhc
Confidence            1110           01111122233333  4578899999999999999999988762      12222222    223


Q ss_pred             cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +....+.+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~R~s  249 (285)
T cd05630         225 SEKFSPDARSLCKMLLCKDPKERLG  249 (285)
T ss_pred             CccCCHHHHHHHHHHhhcCHHHccC
Confidence            3445667889999999999998875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.4e-30  Score=228.23  Aligned_cols=224  Identities=16%  Similarity=0.155  Sum_probs=156.3

Q ss_pred             ccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      .|.+.+.||+|++|.||+|...   +..||+|.+...        .......+.+|+.+++.++||||+ +++    ...
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--------~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~  139 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--------DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDK  139 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--------CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCE
Confidence            3788999999999999999873   667888864221        111234677899999999999999 322    222


Q ss_pred             hhh-------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 SAI-------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .++       ++|.+++.... ....+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+++..
T Consensus       140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence            222       44444432211 0224788888899999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      ........    ..    ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+++...+.+..   
T Consensus       220 ~~~~~~~~----~~----~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  291 (478)
T PTZ00267        220 SDSVSLDV----AS----SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF  291 (478)
T ss_pred             CCcccccc----cc----ccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            43221100    00    11112222333333  457889999999999999999988866   4455555554332   


Q ss_pred             -ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 -RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ...++.+.+++.+|...++..|..
T Consensus       292 ~~~~s~~~~~li~~~L~~dP~~Rps  316 (478)
T PTZ00267        292 PCPVSSGMKALLDPLLSKNPALRPT  316 (478)
T ss_pred             CccCCHHHHHHHHHHhccChhhCcC
Confidence             223456788888888888877764

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.2e-30  Score=213.91  Aligned_cols=217  Identities=15%  Similarity=0.169  Sum_probs=150.3

Q ss_pred             eccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--CCchhhhhHHHhh
Q psy7935          24 FKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--VQKSAIQTLISNL   98 (260)
Q Consensus        24 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--~~~~~~~~l~~~l   98 (260)
                      ||+|+||.||++.+  +++.+|+|.+.....     ......+.+..|+.+++.++|+|++ +.+  ......+.+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL-----KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHH-----hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCC
Confidence            69999999999998  488999998643321     1111235677899999999999999 211  1111222244444


Q ss_pred             ccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          99 DSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        99 ~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      .+..+          ...+++..++.++.|++.||+|||+++|+||||||+||+++.++.++|+|||++...........
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence            33222          23578899999999999999999999999999999999999999999999999875543221110


Q ss_pred             cccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHhhc---cccCC
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILSSY---RRQNR  236 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~  236 (260)
                                ...+...+.+|+..  ..++.++|+||+|++++++++|..|+..       .+....+....   +...+
T Consensus       156 ----------~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (280)
T cd05608         156 ----------GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFS  225 (280)
T ss_pred             ----------ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCC
Confidence                      01111122233333  4567899999999999999999888752       23333333221   22335


Q ss_pred             ccHHHHHHHHHHhcccccc
Q psy7935         237 KQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~  255 (260)
                      +.+.+++.+|...++..|.
T Consensus       226 ~~~~~li~~~l~~~P~~R~  244 (280)
T cd05608         226 PASKSFCEALLAKDPEKRL  244 (280)
T ss_pred             HHHHHHHHHHhcCCHHHhc
Confidence            6778899999888888886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=2.1e-30  Score=217.33  Aligned_cols=183  Identities=19%  Similarity=0.255  Sum_probs=135.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|++.+.||+|+||.||++++.  +..+|+|.+....       .......+.+|++++++++||||+ +++    ..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   76 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG   76 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence            456888999999999999999984  8889999864321       111246789999999999999999 332    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++..
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  153 (331)
T cd06649          77 EISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  153 (331)
T ss_pred             EEEEEeecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccc
Confidence            2222       4455554432   3578888999999999999999986 699999999999999999999999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......            ...+...+.+|+..  ..++.++|+||+|++++++++|+.|+.
T Consensus       154 ~~~~~~~------------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~  203 (331)
T cd06649         154 LIDSMAN------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP  203 (331)
T ss_pred             ccccccc------------cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            4322110            01111222333333  457889999999999999999988864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=3.4e-30  Score=211.65  Aligned_cols=223  Identities=14%  Similarity=0.150  Sum_probs=155.4

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |+..+.||+|+||.||++.+  +++.+|+|.+......     .......+.+|++++++++|+|++     +......+
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~   76 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-----KRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-----hhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEE
Confidence            45678999999999999998  4889999986543321     111234578899999999999998     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++......
T Consensus        77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          77 LVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            2       34444443221 235889999999999999999999999999999999999999999999999998654322


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHh---hc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILS---SY  231 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~---~~  231 (260)
                      ....           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+..       ..+......   .+
T Consensus       156 ~~~~-----------~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
T cd05632         156 ESIR-----------GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVY  224 (285)
T ss_pred             Cccc-----------CCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcccccc
Confidence            1110           00111112233332  4578889999999999999999988751       112222221   12


Q ss_pred             cccCCccHHHHHHHHHHhcccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +...++.+.+++..|...++..|..+
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~~  250 (285)
T cd05632         225 SAKFSEEAKSICKMLLTKDPKQRLGC  250 (285)
T ss_pred             CccCCHHHHHHHHHHccCCHhHcCCC
Confidence            23345667888999988888888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=5e-30  Score=207.81  Aligned_cols=224  Identities=16%  Similarity=0.176  Sum_probs=156.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCCC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDVQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~~   87 (260)
                      ...+.+++.+.||+|+||.||+|.+. +..+++|.+.....         ..+.+.+|+.++++++|+|++ +   ....
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~   73 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---------SPESFLEEAQIMKKLRHDKLVQLYAVVSEE   73 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---------CHHHHHHHHHHHHhcCCCceEEEEeEECCC
Confidence            44567899999999999999999875 67899997543221         134688999999999999998 2   2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++.... ...+++..++.++.|++.||+|||+++++||||||+||+++.++.++|+|||++...
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~  152 (260)
T cd05070          74 PIYIVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLI  152 (260)
T ss_pred             CcEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeec
Confidence            2222       45666654322 234788889999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc---
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~---  231 (260)
                      .........     .......    +.+|+..  ..++.++|+||||++++++++ |..|+.   ..+..+.+....   
T Consensus       153 ~~~~~~~~~-----~~~~~~~----y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05070         153 EDNEYTARQ-----GAKFPIK----WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP  223 (260)
T ss_pred             cCccccccc-----CCCCCcc----ccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            432211100     0000111    2223322  457789999999999999998 666653   344444444332   


Q ss_pred             -cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 -RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 -~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                       +...+..+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05070         224 CPQDCPISLHELMLQCWKKDPEERP  248 (260)
T ss_pred             CCCcCCHHHHHHHHHHcccCcccCc
Confidence             222345667777888777777775

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=2.4e-30  Score=211.78  Aligned_cols=223  Identities=16%  Similarity=0.240  Sum_probs=156.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      .+.|+..+.||+|+||.||+|++  +++    +||+|......       .......+.+|+.++..+.|+|++ +.+. 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   78 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-------SPKANKEILDEAYVMAGVGSPYVCRLLGIC   78 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-------CHHHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            45678899999999999999986  344    47888753221       111245688999999999999998 2221 


Q ss_pred             --Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          87 --QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        87 --~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                        ....+       ++|.+++...  ...+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||++
T Consensus        79 ~~~~~~l~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~  156 (279)
T cd05109          79 LTSTVQLVTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLA  156 (279)
T ss_pred             cCCCcEEEEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCce
Confidence              11111       6677776543  235788899999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      +.........    ....     ....+ +.+|+..  ..++.++|+||||++++++++ +..|++              
T Consensus       157 ~~~~~~~~~~----~~~~-----~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  227 (279)
T cd05109         157 RLLDIDETEY----HADG-----GKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG  227 (279)
T ss_pred             eeccccccee----ecCC-----CccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC
Confidence            7654321110    0000     00111 2233322  457889999999999999887 555432              


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHhccccccc
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                  ..+++.+|+...+.. |+++.++++.+.++....+..
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~dp~~-Rp~~~~l~~~l~~~~~~~~~~  275 (279)
T cd05109         228 ERLPQPPICTIDVYMIMVKCWMIDSEC-RPRFRELVDEFSRMARDPSRF  275 (279)
T ss_pred             CcCCCCccCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHhhcCCcCe
Confidence                        235677777755555 688888888888776555443

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.3e-30  Score=237.82  Aligned_cols=232  Identities=16%  Similarity=0.207  Sum_probs=161.0

Q ss_pred             eeeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935           8 FKITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus         8 ~~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      +...+...+.|++++.||+|+||.||+|++.  +..+++|.+.......      .....+..|+.++.+++||||+ ++
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e------~~~~~~~~EI~IL~~L~HPNIVrl~   78 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE------REKSQLVIEVNVMRELKHKNIVRYI   78 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH------HHHHHHHHHHHHHHHcCCCCcCeEE
Confidence            3344555567999999999999999999984  7789999865433211      1245688999999999999999 33


Q ss_pred             ----CCCchhhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhC-------CceecCCCCCcEEE
Q psy7935          85 ----DVQKSAIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSN-------NIIHGDLTTSNMIL  143 (260)
Q Consensus        85 ----~~~~~~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~-------~i~H~dlkp~Nill  143 (260)
                          +.....++.+++|+.+..+          ...+++..++.|+.||+.||+|||+.       +|+||||||+|||+
T Consensus        79 d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL  158 (1021)
T PTZ00266         79 DRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL  158 (1021)
T ss_pred             EEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence                2322223334444433222          23588999999999999999999984       59999999999999


Q ss_pred             cc-----------------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeE
Q psy7935         144 SS-----------------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMI  202 (260)
Q Consensus       144 ~~-----------------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~  202 (260)
                      +.                 .+.+||+|||++..........           ...+...+++|+.+    ..+++++|+|
T Consensus       159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~-----------s~vGTp~YmAPEvL~ge~~~~s~KSDVW  227 (1021)
T PTZ00266        159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAH-----------SCVGTPYYWSPELLLHETKSYDDKSDMW  227 (1021)
T ss_pred             ecCccccccccccccccCCCCceEEccCCcccccccccccc-----------ccCCCccccCHHHHhccCCCCCchhHHH
Confidence            64                 3459999999997653321100           11122223344433    3478899999


Q ss_pred             eecceeeeecccccccc----HHHHHHHHHhhcc---ccCCccHHHHHHHHHHhccccccc
Q psy7935         203 DFGLSQIKVSTEDKAVD----FRDMFNWILSSYR---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       203 s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ||||+++++++|..|+.    ...++..+.....   ...++.+.+++..|...++..|..
T Consensus       228 SLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPS  288 (1021)
T PTZ00266        228 ALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPS  288 (1021)
T ss_pred             HHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcC
Confidence            99999999999999876    3334433332211   123467888999998888888764

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=4.2e-30  Score=210.25  Aligned_cols=218  Identities=14%  Similarity=0.144  Sum_probs=151.0

Q ss_pred             eccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--CchhhhhHHHhh
Q psy7935          24 FKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQTLISNL   98 (260)
Q Consensus        24 lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~~l~~~l   98 (260)
                      ||+|+||.||+++.  +|+.+|+|.+..+....     ......+..|++++++++||||+ +.+.  .....+.+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK-----KSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc-----chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecC
Confidence            69999999999997  48999999864332211     11233456799999999999999 2211  122233344444


Q ss_pred             ccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccc
Q psy7935          99 DSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL  170 (260)
Q Consensus        99 ~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~  170 (260)
                      .+..+        ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++..........   
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~---  152 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTIT---  152 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceee---
Confidence            33322        2347788888899999999999999999999999999999999999999999987654322110   


Q ss_pred             cccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------HHHHHHHHHhhcc----ccCCc
Q psy7935         171 YVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWILSSYR----RQNRK  237 (260)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~~~~~----~~~~~  237 (260)
                              ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.       ..++.........    ...++
T Consensus       153 --------~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (277)
T cd05607         153 --------QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTE  224 (277)
T ss_pred             --------ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCH
Confidence                    00111112233322  447889999999999999999998864       1233333333221    12356


Q ss_pred             cHHHHHHHHHHhcccccccc
Q psy7935         238 QFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~~~  257 (260)
                      .+.+++++|...++..|...
T Consensus       225 ~~~~li~~~L~~~P~~R~~~  244 (277)
T cd05607         225 ESKDICRLFLAKKPEDRLGS  244 (277)
T ss_pred             HHHHHHHHHhccCHhhCCCC
Confidence            67999999999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0610|consensus

Probab=99.97  E-value=2.8e-30  Score=209.83  Aligned_cols=240  Identities=12%  Similarity=0.094  Sum_probs=178.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|+.++.||.|.-|.||+++..  +..+|+|++.+..     +.......+...|.+||+.+.||.++ ++..  ...+
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~-----l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~  151 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKES-----LASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKY  151 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHH-----HhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccce
Confidence            34788999999999999999986  5899999965543     33333456788899999999999999 3332  1223


Q ss_pred             hhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 IQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+.+|||+.++.+        ++.+++..++.++.+++.||+|||..||++|||||+|||+.++|++.|+||.++.....
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~  231 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV  231 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence            3447777766544        77899999999999999999999999999999999999999999999999999865421


Q ss_pred             cc------c--------------------------c---ccccc-----------ccccceeeeeeeeeecCcccc--cc
Q psy7935         163 TE------D--------------------------K---AVDLY-----------VLKRNLTTIIVVAYCWSKGTL--QS  194 (260)
Q Consensus       163 ~~------~--------------------------~---~~d~~-----------~~~~~~~~~~~~~~~~~~~~~--~~  194 (260)
                      .-      .                          .   .++..           ..+.-...++++..+.+|+..  ..
T Consensus       232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G  311 (459)
T KOG0610|consen  232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG  311 (459)
T ss_pred             CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence            00      0                          0   00000           001111235555556666666  34


Q ss_pred             ccccceeEeecceeeeecccccccc---HHHHHHHHHhhccccC-----CccHHHHHHHHHHhcccccccccCC
Q psy7935         195 YNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQN-----RKQFETVMKTFAEVELRGRKRCMVG  260 (260)
Q Consensus       195 ~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~~~~il~~l~~~~~~~r~~~~~~  260 (260)
                      -..++|.|+||+.+|||+.|.-|+.   -++.+..++.....+.     ..++.+++.+|...++..|..+.-|
T Consensus       312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rG  385 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRG  385 (459)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccc
Confidence            5678999999999999999998887   5666666666543321     2567999999999999999877544

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2e-30  Score=222.09  Aligned_cols=180  Identities=19%  Similarity=0.178  Sum_probs=133.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ..|.+++.||+|+||.||+|...    +..|++|.+...             ....+|++++++++||||+ +++.    
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------------~~~~~E~~il~~l~h~~iv~~~~~~~~~  158 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------------KTPGREIDILKTISHRAIINLIHAYRWK  158 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------------ccHHHHHHHHHhcCCCCccceeeeEeeC
Confidence            45889999999999999999863    567899874321             2346799999999999999 3221    


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++      ++|.+++...   ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus       159 ~~~~lv~e~~~~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~  235 (392)
T PHA03207        159 STVCMVMPKYKCDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL  235 (392)
T ss_pred             CEEEEEehhcCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence            11122      5566666432   35889999999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .........        ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       236 ~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~  288 (392)
T PHA03207        236 DAHPDTPQC--------YGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF  288 (392)
T ss_pred             Ccccccccc--------cccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            433211110        011122223334433  457889999999999999999988763

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=5.9e-30  Score=207.71  Aligned_cols=225  Identities=16%  Similarity=0.179  Sum_probs=155.8

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---C
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---V   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~   86 (260)
                      +.+.++|.+.+.||+|+||.||+|++. ...|++|.+.....         ..+.+.+|++++++++|+||+ +++   .
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~   72 (262)
T cd05071           2 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE   72 (262)
T ss_pred             CCChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---------CHHHHHHHHHHHHhCCCCCcceEEEEECC
Confidence            345567899999999999999999984 45799997543221         134688999999999999998 222   1


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ...+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||.+..
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~  151 (262)
T cd05071          73 EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  151 (262)
T ss_pred             CCcEEEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceee
Confidence            11111       45555554321 23467888899999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ..........         ...+...+.+|+..  ..++.++|+||+|++++++++ +..|+.   ..+..+.+..... 
T Consensus       152 ~~~~~~~~~~---------~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~  222 (262)
T cd05071         152 IEDNEYTARQ---------GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM  222 (262)
T ss_pred             cccccccccc---------CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCC
Confidence            5432211100         00011112333333  457889999999999999999 655543   3344444433321 


Q ss_pred             ---ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         ...+..+.+++.+|...++..|.
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp  248 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERP  248 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCC
Confidence               22345667777777777777774

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.1e-29  Score=206.00  Aligned_cols=225  Identities=15%  Similarity=0.161  Sum_probs=153.7

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ..+.+++.+.||+|++|.||+|.++ ++.||+|.+.....         ..+.+.+|+.++++++|+|++ +.+    ..
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   74 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---------DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE   74 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---------cHHHHHHHHHHHHHCCCCCccceeEEEecCC
Confidence            4456888999999999999999974 67899998543221         135688899999999999999 222    11


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++.... ...+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||++...
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  153 (261)
T cd05068          75 PIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVI  153 (261)
T ss_pred             CeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEc
Confidence            1111       45555554432 345788999999999999999999999999999999999999999999999999766


Q ss_pred             cccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc----c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY----R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~----~  232 (260)
                      .........    + ......+.+|+...  ...++.++|+||+|++++++++ |..|+.   ..++...+....    +
T Consensus       154 ~~~~~~~~~----~-~~~~~~y~aPE~~~--~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~  226 (261)
T cd05068         154 KEDIYEARE----G-AKFPIKWTAPEAAL--YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCP  226 (261)
T ss_pred             cCCcccccC----C-CcCceeccCccccc--cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            532111100    0 00011122222111  1456789999999999999998 766653   333444443322    1


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...+..+.+++.+|...++..|.
T Consensus       227 ~~~~~~~~~li~~~l~~~P~~Rp  249 (261)
T cd05068         227 PGCPKELYDIMLDCWKEDPDDRP  249 (261)
T ss_pred             CcCCHHHHHHHHHHhhcCcccCC
Confidence            22245566777777777776664

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=3e-30  Score=209.19  Aligned_cols=220  Identities=22%  Similarity=0.266  Sum_probs=151.3

Q ss_pred             cceeeccCCceeEEEEEEc------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          20 PAECFKQGAEGRIFKTEYL------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      ..+.||.|+||.||+|.+.      +.+|+||.+....       .....+.+.+|++.+++++||||+     +.....
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-------~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~   75 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-------SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEP   75 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-------SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSS
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-------ccccceeeeeccccccccccccccccccccccccc
Confidence            4689999999999999987      6899999863211       111246789999999999999999     222222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+       ++|.+++.... ...+++..+..|+.|++.||.|||+++++|+||+|+||+++.++.+||+|||++....
T Consensus        76 ~~lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   76 LFLVMEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             EEEEEE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred             ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            222       67888887762 3458889999999999999999999999999999999999999999999999997662


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcccc-
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYRRQ-  234 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~-  234 (260)
                      ..........        ......+.+|+..  ...+.++||||||++++|+.+ +..|..   ..++.+.+..+.... 
T Consensus       155 ~~~~~~~~~~--------~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~  226 (259)
T PF07714_consen  155 EKSKYKNDSS--------QQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPI  226 (259)
T ss_dssp             TSSSEEESTT--------SESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTS
T ss_pred             cccccccccc--------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence            2211100000        0011112233333  447899999999999999999 555544   444445554433321 


Q ss_pred             ---CCccHHHHHHHHHHhcccccc
Q psy7935         235 ---NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ---~~~~~~~il~~l~~~~~~~r~  255 (260)
                         .+..+.+++.+|-+.++..|.
T Consensus       227 ~~~~~~~~~~li~~C~~~~p~~RP  250 (259)
T PF07714_consen  227 PDNCPKDIYSLIQQCWSHDPEKRP  250 (259)
T ss_dssp             BTTSBHHHHHHHHHHT-SSGGGS-
T ss_pred             ccchhHHHHHHHHHHcCCChhhCc
Confidence               134456666666666666654

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=3.6e-30  Score=209.41  Aligned_cols=186  Identities=11%  Similarity=0.098  Sum_probs=131.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.+++.+.||+|+||.||+|.+.     +.+||+|.+.....       ......+.+|+..+.+++|||++ +.+   
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   76 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-------DKQRRGFLAEALTLGQFDHSNIVRLEGVIT   76 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-------HHHHHHHHHHHHHHhcCCCCCcCeEEEEEe
Confidence            345788899999999999999863     56899997543211       11235688999999999999999 222   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...  ...+++..++.++.|++.||+|||+++++||||||+|||++.++.++++|||.+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~  154 (266)
T cd05064          77 RGNTMMIVTEYMSNGALDSFLRKH--EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRL  154 (266)
T ss_pred             cCCCcEEEEEeCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccc
Confidence             222222       4555555432  235788899999999999999999999999999999999999999999999987


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      .......... .    ...    .....+.+|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       155 ~~~~~~~~~~-~----~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~  209 (266)
T cd05064         155 QEDKSEAIYT-T----MSG----KSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPY  209 (266)
T ss_pred             ccccccchhc-c----cCC----CCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCc
Confidence            5432211000 0    000    001112344433  567889999999999999664 76664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.97  E-value=2.4e-30  Score=210.87  Aligned_cols=185  Identities=18%  Similarity=0.235  Sum_probs=128.9

Q ss_pred             CcceeeccCCceeEEEEEEc--Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C--
Q psy7935          19 QPAECFKQGAEGRIFKTEYL--GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q--   87 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~--   87 (260)
                      .+.+.||+|+||.||+|.+.  +.  .+|+|.+.....      .....+.+.+|+++++.++|+||+ +++.    .  
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC------TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES   75 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc
Confidence            35688999999999999984  32  589997543221      112246788899999999999999 3321    1  


Q ss_pred             -c---hhh-------hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          88 -K---SAI-------QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        88 -~---~~~-------~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                       .   ..+       ++|.+++.....   ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.++|+|
T Consensus        76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  155 (272)
T cd05075          76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVAD  155 (272)
T ss_pred             cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECC
Confidence             0   111       455555422111   23478888999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ||+++.........     .+    ....+.+.| +++..  ..+++++|+||+|++++++++ +..|+
T Consensus       156 fg~~~~~~~~~~~~-----~~----~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~  215 (272)
T cd05075         156 FGLSKKIYNGDYYR-----QG----RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPY  215 (272)
T ss_pred             CCcccccCccccee-----cC----CcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCC
Confidence            99987654322110     00    111222223 23322  447889999999999999988 55443

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=5.1e-30  Score=208.42  Aligned_cols=186  Identities=15%  Similarity=0.187  Sum_probs=133.4

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~   89 (260)
                      .|++.+.||+|+||.||+|++  +++.||||.+.......     ......+.+|+++++.++|||++ +++.    ...
T Consensus         3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (267)
T cd08228           3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD-----AKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNEL   77 (267)
T ss_pred             ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC-----HHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeE
Confidence            477889999999999999997  58999999754322211     12245688999999999999999 3322    111


Q ss_pred             hh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++..... ...+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++....
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          78 NIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            11       344444432111 2347888889999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      .......          .. .+.+.| +|+..  ...+.++|+||+|++++++.++..|+
T Consensus       158 ~~~~~~~----------~~-~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~  206 (267)
T cd08228         158 SKTTAAH----------SL-VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             chhHHHh----------cC-CCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCC
Confidence            3221100          00 111222 33322  44678899999999999999988764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=1.1e-29  Score=205.81  Aligned_cols=225  Identities=16%  Similarity=0.191  Sum_probs=156.4

Q ss_pred             cccccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---C
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---V   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~   86 (260)
                      +...+.|++.+.||+|+||.||+|.. .++++|+|.+.....         ....+.+|+.++++++|+|++ +.+   .
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   72 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---------SPEAFLAEANLMKQLQHPRLVRLYAVVTQ   72 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---------cHHHHHHHHHHHHhcCCcCeeeEEEEEcc
Confidence            34566788999999999999999997 478999998543221         135688999999999999998 222   1


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ...++...+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  151 (260)
T cd05067          73 EPIYIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARL  151 (260)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceee
Confidence            11121       45666654322 33578888899999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ..........     ......    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+....+..... 
T Consensus       152 ~~~~~~~~~~-----~~~~~~----~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  222 (260)
T cd05067         152 IEDNEYTARE-----GAKFPI----KWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM  222 (260)
T ss_pred             cCCCCccccc-----CCcccc----cccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC
Confidence            5422111000     000011    12223322  456788999999999999998 777764   3344444333221 


Q ss_pred             ---ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         ...+..+.+++.+|...++..|.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05067         223 PRPDNCPEELYELMRLCWKEKPEERP  248 (260)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCC
Confidence               22234677777777777777774

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=7.3e-30  Score=209.44  Aligned_cols=214  Identities=16%  Similarity=0.219  Sum_probs=150.6

Q ss_pred             ccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      .+++.+.||+|+||.||+|..      .+..|++|.+....        ....+.+.+|++++++++|||++ +.+    
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   76 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--------AEHLRDFEREIEILKSLQHDNIVKYKGVCYS   76 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--------HHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc
Confidence            477789999999999999974      37889999753221        11235688999999999999999 322    


Q ss_pred             CCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 VQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 ~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      .....+         ++|.+++...  ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~  154 (284)
T cd05081          77 AGRRNLRLVMEYLPYGSLRDYLQKH--RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGL  154 (284)
T ss_pred             CCCCceEEEEEecCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcc
Confidence            221222         5666666432  12478888899999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeee-eeeecCcccc--ccccccceeEeecceeeeecccccc----------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIV-VAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA----------------  217 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~----------------  217 (260)
                      +..........    ...    .... ...+++|+..  ..++.++|+||+|+++++++++..+                
T Consensus       155 ~~~~~~~~~~~----~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~  226 (284)
T cd05081         155 TKVLPQDKEYY----KVR----EPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDK  226 (284)
T ss_pred             cccccCCCcce----eec----CCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhccccc
Confidence            97654332110    000    0001 1112333333  4577889999999999999875322                


Q ss_pred             --------------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         218 --------------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       218 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                                ....+++.+|+...+.. |+++.++++.|..+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~-Rpt~~ei~~~l~~~  283 (284)
T cd05081         227 QGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ-RPSFSELALQVEAI  283 (284)
T ss_pred             ccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhh-CCCHHHHHHHHHhc
Confidence                                      23556777777755554 56777777776654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-29  Score=206.66  Aligned_cols=186  Identities=19%  Similarity=0.221  Sum_probs=130.6

Q ss_pred             cCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~   87 (260)
                      |++.+.||+|+||.||+|.+.     +..||+|.+......      ......+.+|+..++.++|+|++ +++.    .
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT------YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC------HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC
Confidence            456789999999999999873     367999986433221      11235688999999999999999 3321    1


Q ss_pred             c------hhh-------hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          88 K------SAI-------QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        88 ~------~~~-------~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                      .      ..+       ++|.+++.....   ...+++..+..++.|++.||+|||+++++||||||+||+++.++.+||
T Consensus        75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl  154 (273)
T cd05035          75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCV  154 (273)
T ss_pred             ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEE
Confidence            1      011       455555432211   235788889999999999999999999999999999999999999999


Q ss_pred             Eeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      +|||+++...........     .    ...... +.+++..  ..++.++|+||+|++++++++ |..|+
T Consensus       155 ~dfg~~~~~~~~~~~~~~-----~----~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~  216 (273)
T cd05035         155 ADFGLSKKIYSGDYYRQG-----R----IAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPY  216 (273)
T ss_pred             CCccceeecccccccccc-----c----cccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence            999998765433211100     0    001111 2233322  457889999999999999988 55543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.2e-29  Score=204.99  Aligned_cols=219  Identities=18%  Similarity=0.244  Sum_probs=151.8

Q ss_pred             cccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~   88 (260)
                      ..+.+++.+.||+|+||.||+|...|+.|++|.+....      .   ..+++.+|+.++++++|+|++ +++.    ..
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~------~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   74 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS------T---AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNP   74 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEecCcEEEEEEeccch------h---HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCC
Confidence            34567889999999999999999999999999853221      0   246788999999999999999 2222    22


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++.... ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||.+....
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~  153 (256)
T cd05039          75 LYIVTEYMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS  153 (256)
T ss_pred             eEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccc
Confidence            122       45666654432 2357889999999999999999999999999999999999999999999999987653


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      .......         ...    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..++.+.+.....   
T Consensus       154 ~~~~~~~---------~~~----~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~  220 (256)
T cd05039         154 QGQDSGK---------LPV----KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEA  220 (256)
T ss_pred             cccccCC---------Ccc----cccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            3221110         001    12223322  456788999999999999986 665543   3333333322211   


Q ss_pred             -ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 -RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 -~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                       ...++.+.+++.+|...++..|.
T Consensus       221 ~~~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05039         221 PEGCPPEVYKVMKDCWELDPAKRP  244 (256)
T ss_pred             ccCCCHHHHHHHHHHhccChhhCc
Confidence             12234555666666666555553

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=7.2e-30  Score=209.33  Aligned_cols=225  Identities=17%  Similarity=0.188  Sum_probs=149.9

Q ss_pred             cccCcceeeccCCceeEEEEEEcC-------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLG-------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---   84 (260)
                      +.|++.+.||+|+||.||+|.+.+       ..|++|.+....       .......+.+|+.++.+++||||+ +.   
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-------~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~   77 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-------EPKVQQEFRQEAELMSDLQHPNIVCLLGVC   77 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-------CHHHHHHHHHHHHHHHhcCCcccceEEEEE
Confidence            457889999999999999999742       468898753221       111245688999999999999998 22   


Q ss_pred             -CCCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE
Q psy7935          85 -DVQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL  143 (260)
Q Consensus        85 -~~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill  143 (260)
                       +....++       ++|.+++.....             ...++...+..++.|++.||.|||+++++|+||||+||++
T Consensus        78 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~  157 (283)
T cd05048          78 TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV  157 (283)
T ss_pred             cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE
Confidence             2222222       566666654321             1347788889999999999999999999999999999999


Q ss_pred             ccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc-
Q psy7935         144 SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-  219 (260)
Q Consensus       144 ~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-  219 (260)
                      +.++.++|+|||++...........    ......+.    .+.+|+..  ..+++++|+||+|++++++++ |..|+. 
T Consensus       158 ~~~~~~~L~dfg~~~~~~~~~~~~~----~~~~~~~~----~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~  229 (283)
T cd05048         158 GEGLTVKISDFGLSRDIYSADYYRV----QSKSLLPV----RWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYG  229 (283)
T ss_pred             cCCCcEEECCCcceeeccccccccc----cCCCcccc----cccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence            9999999999999875433211100    00011111    12233322  457889999999999999987 766543 


Q ss_pred             --HHHHHHHHHhhc----cccCCccHHHHHHHHHHhcccccc
Q psy7935         220 --FRDMFNWILSSY----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       220 --~~~~~~~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                        ..++...+..+.    +...++.+.+++.+|...++..|.
T Consensus       230 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp  271 (283)
T cd05048         230 FSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRP  271 (283)
T ss_pred             CCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCc
Confidence              233333333222    122234555666666555555554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG4717|consensus

Probab=99.96  E-value=1.7e-30  Score=216.56  Aligned_cols=221  Identities=15%  Similarity=0.123  Sum_probs=167.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CC-c
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQ-K   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~-~   88 (260)
                      ..|++.+.||+|-|..|-++++  +|..||||++.+.+..     ... ...+..|+..++-++||||+ +++   .+ .
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-----~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTK   91 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-----TLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTK   91 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-----hhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccce
Confidence            4578889999999999999997  7999999998765543     222 34677899999999999999 443   22 2


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~  160 (260)
                      .++       |+|++||-..  ...+.++.+..++.||+.|+.|+|..-++||||||+|+.+-+ -|.|||.|||++..+
T Consensus        92 lyLiLELGD~GDl~DyImKH--e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf  169 (864)
T KOG4717|consen   92 LYLILELGDGGDLFDYIMKH--EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF  169 (864)
T ss_pred             EEEEEEecCCchHHHHHHhh--hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC
Confidence            222       7999998554  346899999999999999999999999999999999998876 689999999999766


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHH---HHHHHHhhc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRD---MFNWILSSY  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~---~~~~~~~~~  231 (260)
                      .+.+.           +.+.++...+-+|+-+   .+..|++||||+|+++|.+++|+.|++   ..+   ++--|---.
T Consensus       170 ~PG~k-----------L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtv  238 (864)
T KOG4717|consen  170 QPGKK-----------LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTV  238 (864)
T ss_pred             CCcch-----------hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccC
Confidence            55432           2222222222333333   456789999999999999999999988   222   233333335


Q ss_pred             cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      |.....++.++++.|..-+++.|.
T Consensus       239 PshvS~eCrdLI~sMLvRdPkkRA  262 (864)
T KOG4717|consen  239 PSHVSKECRDLIQSMLVRDPKKRA  262 (864)
T ss_pred             chhhhHHHHHHHHHHHhcCchhhc
Confidence            666778888999888877777664

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=6.4e-30  Score=214.50  Aligned_cols=183  Identities=19%  Similarity=0.261  Sum_probs=134.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||++.+.  +..+|+|.+....       .......+.+|++++++++|+||+ +    .+..
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   76 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG   76 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC
Confidence            466889999999999999999984  7888988754321       111245688999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+||+|||++..
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  153 (333)
T cd06650          77 EISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ  153 (333)
T ss_pred             EEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchh
Confidence            2222       4555555432   2478888889999999999999985 799999999999999999999999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       154 ~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~  203 (333)
T cd06650         154 LIDSMAN------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIP  203 (333)
T ss_pred             hhhhccc------------cCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            4332110            00111122233333  347788999999999999999988754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=6.9e-30  Score=212.76  Aligned_cols=182  Identities=15%  Similarity=0.226  Sum_probs=127.8

Q ss_pred             ceeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchhh
Q psy7935          21 AECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSAI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~~   91 (260)
                      ...||+|+||.||+|+..    +..+|+|.+.....          ...+.+|+++++.++|||++ +    .......+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   75 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----------SMSACREIALLRELKHPNVIALQKVFLSHSDRKV   75 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeE
Confidence            468999999999999963    47899997532211          23467899999999999998 2    22222222


Q ss_pred             --------hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE----ccCCcEEEEe
Q psy7935          92 --------QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL----SSDHHLVMID  153 (260)
Q Consensus        92 --------~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill----~~~~~~kl~D  153 (260)
                              +++.+++.....      ...+++..+..++.|++.||+|||+++|+||||||+|||+    +.++.+||+|
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~D  155 (317)
T cd07867          76 WLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIAD  155 (317)
T ss_pred             EEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence                    344444432110      2247888899999999999999999999999999999999    4567999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||+++..........+.       ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 fG~a~~~~~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         156 MGFARLFNSPLKPLADL-------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             ccceeccCCCccccccc-------CcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            99997654432111110       011122223344433   346889999999999999999987754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=1.8e-29  Score=204.10  Aligned_cols=219  Identities=19%  Similarity=0.256  Sum_probs=151.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCchh
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKSA   90 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~~   90 (260)
                      ...|++.+.||+|+||.||++...|..+++|......          ..+.+.+|+.++++++|+|++ +.+   .....
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG   74 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc----------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCc
Confidence            3457888999999999999999999999999753211          135688999999999999999 222   11122


Q ss_pred             h---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          91 I---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        91 ~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .         ++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++....
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          75 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             eEEEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecc
Confidence            2         45666654432 2347888889999999999999999999999999999999999999999999986543


Q ss_pred             ccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----c
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----R  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~  233 (260)
                      ......         .....+.+|+...  ...++.++|+||+|++++++.+ |..|+.   ..++...+..++.    .
T Consensus       154 ~~~~~~---------~~~~~y~aPE~~~--~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T cd05082         154 STQDTG---------KLPVKWTAPEALR--EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPD  222 (256)
T ss_pred             ccCCCC---------ccceeecCHHHHc--cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            322110         0111122222111  1457788999999999999987 666543   3344444333222    1


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..++.+.+++.+|...++..|.
T Consensus       223 ~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05082         223 GCPPVVYDVMKQCWHLDAATRP  244 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCc
Confidence            1234556666666666666663

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0196|consensus

Probab=99.96  E-value=6.4e-30  Score=221.66  Aligned_cols=216  Identities=15%  Similarity=0.206  Sum_probs=158.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      ......+.+.||.|.||.||+|+.+     ...||||.++... .    ++  .+..|+.|+.|+.++.||||+ +.+. 
T Consensus       627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-t----ek--qrrdFL~EAsIMGQFdHPNIIrLEGVV  699 (996)
T KOG0196|consen  627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-T----EK--QRRDFLSEASIMGQFDHPNIIRLEGVV  699 (996)
T ss_pred             ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-c----HH--HHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence            3445678899999999999999984     4689999865332 1    11  257899999999999999999 4332 


Q ss_pred             --Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          87 --QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        87 --~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        .+..+        |+|..||..+.  ..++.-++..++++|+.|++||-++|.+||||..+|||++++..+|++|||+
T Consensus       700 Tks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGL  777 (996)
T KOG0196|consen  700 TKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGL  777 (996)
T ss_pred             ecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccc
Confidence              22222        78888887764  3488889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeee-ee-ecCcccc---ccccccceeEeecceeeeecc-cccccc-----------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVV-AY-CWSKGTL---QSYNHHLVMIDFGLSQIKVST-EDKAVD-----------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~-~~~~~~~---~~~~~~~di~s~g~~~~~~~~-~~~~~~-----------  219 (260)
                      ++...+..+          ..++..++ .| .|.+++.   ..++.++|+||+|+++||.++ |..|..           
T Consensus       778 SRvledd~~----------~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI  847 (996)
T KOG0196|consen  778 SRVLEDDPE----------AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI  847 (996)
T ss_pred             eeecccCCC----------ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH
Confidence            987644321          12333333 33 3644433   569999999999999999875 444321           


Q ss_pred             ---------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ---------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ---------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                     +.+++..||++.+.. ||.+.+|...|.++
T Consensus       848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~-RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNR-RPKFAQIVSTLDKL  891 (996)
T ss_pred             HhccCCCCCCCCcHHHHHHHHHHHHHHhhc-CCCHHHHHHHHHHH
Confidence                           445555555544443 55556665555543

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=1.6e-29  Score=209.16  Aligned_cols=223  Identities=17%  Similarity=0.220  Sum_probs=154.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +++.||+|.+.......       ....+.+|+.++++++||||+ +++    ...
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~   78 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIIHTEKS   78 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-------chhHHHHHHHHHHhcCCCCcceEEEEEecCCe
Confidence            4578899999999999999998  47899999864332211       123567899999999999999 222    222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      ++|.+++...  ...+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.....
T Consensus        79 ~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  156 (301)
T cd07873          79 LTLVFEYLDKDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI  156 (301)
T ss_pred             EEEEEeccccCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC
Confidence            122      4444544332  23477888999999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh------
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS------  230 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~------  230 (260)
                      ......          .......+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+....+...      
T Consensus       157 ~~~~~~----------~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~  226 (301)
T cd07873         157 PTKTYS----------NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE  226 (301)
T ss_pred             CCCccc----------ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence            211100          01112223333332   346778999999999999999987765   22222111110      


Q ss_pred             ---------------------------ccccCCccHHHHHHHHHHhcccccccc
Q psy7935         231 ---------------------------YRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       231 ---------------------------~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                                                 .....++.+.+++.+|...+++.|...
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~  280 (301)
T cd07873         227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISA  280 (301)
T ss_pred             hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCH
Confidence                                       011224456789999999999999753

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG1095|consensus

Probab=99.96  E-value=8.7e-30  Score=230.53  Aligned_cols=223  Identities=16%  Similarity=0.222  Sum_probs=166.0

Q ss_pred             eccccccccCcceeeccCCceeEEEEEEc---Cc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEYL---GR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC   82 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~   82 (260)
                      +++......+....||+|.||.||.|...   |.    .||+|.+..  .     .+......|++|..+++.++||||+
T Consensus       686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~--~-----~~~~~~~~Fl~Ea~~m~~f~HpNiv  758 (1025)
T KOG1095|consen  686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKR--L-----SSEQEVSDFLKEALLMSKFDHPNIV  758 (1025)
T ss_pred             cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccc--c-----CCHHHHHHHHHHHHHHhcCCCccee
Confidence            34455566777899999999999999973   33    377776421  1     1222357899999999999999999


Q ss_pred             -----EeCCCchhh-------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          83 -----LDDVQKSAI-------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        83 -----~~~~~~~~~-------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                           ..+.....+       |+|..||+..+.    ...++...+..++.|+|.|++||+++.++||||.++|+|++..
T Consensus       759 ~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~  838 (1025)
T KOG1095|consen  759 SLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDER  838 (1025)
T ss_pred             eEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeeccc
Confidence                 333233333       788888766422    3458899999999999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeee-ecC-cccc--ccccccceeEeecceeeeeccccc------
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWS-KGTL--QSYNHHLVMIDFGLSQIKVSTEDK------  216 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~di~s~g~~~~~~~~~~~------  216 (260)
                      ..|||+|||+|+..-     ..+.|+....     +..| -|. |+.+  .-++.++|+||||+++||+.|...      
T Consensus       839 r~VKIaDFGlArDiy-----~~~yyr~~~~-----a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~  908 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIY-----DKDYYRKHGE-----AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSR  908 (1025)
T ss_pred             CcEEEcccchhHhhh-----hchheeccCc-----cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCc
Confidence            999999999998332     2233332222     2222 344 4444  569999999999999999887442      


Q ss_pred             ---------------------cccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         217 ---------------------AVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       217 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                           |....+++.+||+..+.. ||++.++++++..+.
T Consensus       909 ~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~-RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  909 SNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPED-RPSFRTIVEQDPAIS  962 (1025)
T ss_pred             chHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhh-CccHHHHHhhhhhhh
Confidence                                 333668899999966665 899999999887664

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.96  E-value=5e-29  Score=201.30  Aligned_cols=220  Identities=15%  Similarity=0.196  Sum_probs=155.6

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |++.+.||+|+||.||++.+  +++.+|+|.+.....     .  ...+.+.+|+.+++.++|+|++     +.+....+
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-----~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   74 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-----S--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLY   74 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-----h--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEE
Confidence            67789999999999999998  488999998643221     1  1235678899999999999998     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++++|||.+......
T Consensus        75 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  153 (255)
T cd08219          75 IVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP  153 (255)
T ss_pred             EEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence            2       44555553322 345788899999999999999999999999999999999999999999999998655432


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc----c
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR----R  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~  233 (260)
                      ......           ..+.+.| +|+..  ...+.++|+||+|++++++++|..|+.   .......+..+..    .
T Consensus       154 ~~~~~~-----------~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  222 (255)
T cd08219         154 GAYACT-----------YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPS  222 (255)
T ss_pred             cccccc-----------ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCc
Confidence            211100           0111112 23322  347788999999999999999998876   3334444433322    2


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++.+|...++..|..
T Consensus       223 ~~~~~~~~li~~~l~~~P~~Rp~  245 (255)
T cd08219         223 HYSYELRSLIKQMFKRNPRSRPS  245 (255)
T ss_pred             ccCHHHHHHHHHHHhCCcccCCC
Confidence            22345678888888888888854

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG1035|consensus

Probab=99.96  E-value=4.4e-30  Score=231.55  Aligned_cols=107  Identities=25%  Similarity=0.259  Sum_probs=77.6

Q ss_pred             hHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc---c---cc------ccccccccccc
Q psy7935         108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV---S---TE------DKAVDLYVLKR  175 (260)
Q Consensus       108 ~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~---~---~~------~~~~d~~~~~~  175 (260)
                      .....|+++.+|++||.|+|++||+||||||.||+++.++.|||+|||+++...   .   ..      ..+++.-....
T Consensus       695 ~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts  774 (1351)
T KOG1035|consen  695 QRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTS  774 (1351)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCccccc
Confidence            367888999999999999999999999999999999999999999999998732   0   00      01111111222


Q ss_pred             ceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccc
Q psy7935         176 NLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       176 ~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      .++|..|.+|+...... ..++.|+||||+|++++||.-.
T Consensus       775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP  814 (1351)
T KOG1035|consen  775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP  814 (1351)
T ss_pred             ccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence            33334444444322222 3699999999999999998654

>KOG0579|consensus

Probab=99.96  E-value=2.3e-31  Score=226.39  Aligned_cols=226  Identities=22%  Similarity=0.247  Sum_probs=165.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--VQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--~~   87 (260)
                      .+.++..++..||.|+||.||++...  +--.|.|++..+.        ....+.++-|+++|..+.||+|+ +++  +.
T Consensus        29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks--------eEELEDylVEIeILa~CdHP~ivkLl~ayy~  100 (1187)
T KOG0579|consen   29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--------EEELEDYLVEIEILAECDHPVIVKLLSAYYF  100 (1187)
T ss_pred             CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc--------hhHHhhhhhhhhhhhcCCChHHHHHHHHHhc
Confidence            34566788899999999999999864  5556667654332        12246789999999999999999 222  12


Q ss_pred             chhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+-++.|.+||.++-.       +..+++..+.-++.|++.||.|||+++|+|||||..|||++.+|.++|+|||.+...
T Consensus       101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn  180 (1187)
T KOG0579|consen  101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKN  180 (1187)
T ss_pred             cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccc
Confidence            3334557788776533       667999999999999999999999999999999999999999999999999998554


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      .....+.          .++++++||++|+++       .+|+.++||||||+++++|..+.-|..   .-.++-.+-..
T Consensus       181 ~~t~qkR----------DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS  250 (1187)
T KOG0579|consen  181 KSTRQKR----------DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS  250 (1187)
T ss_pred             hhHHhhh----------ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc
Confidence            3332221          245556666666555       568999999999999999988765544   11222222211


Q ss_pred             ------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 ------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            -|+.+..++.+++++|...++++|..
T Consensus       251 ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~  282 (1187)
T KOG0579|consen  251 EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP  282 (1187)
T ss_pred             CCCcccCcchhhhHHHHHHHHHHhcCCccCCC
Confidence                  12334556788999998888888863

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.96  E-value=1.6e-29  Score=208.18  Aligned_cols=221  Identities=16%  Similarity=0.176  Sum_probs=159.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|++.+.||+|++|.||++.+  .++.+|+|++.....     ........+.+|+++++++.||||+ +++    ....
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   76 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-----VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNL   76 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeE
Confidence            467789999999999999998  489999998643221     1122246788999999999999999 322    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.....
T Consensus        77 ~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          77 YLVMEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             EEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            22       4455555433   3588899999999999999999999999999999999999999999999999876543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~  234 (260)
                      ....             ..+...+.+|+..  ...+.++|+||+|++++++++|..|+.   ..+..+.+..+.   +..
T Consensus       154 ~~~~-------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  220 (290)
T cd05580         154 RTYT-------------LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSF  220 (290)
T ss_pred             CCCC-------------CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCcc
Confidence            3100             0011112233322  346778999999999999999988865   334444444332   233


Q ss_pred             CCccHHHHHHHHHHhccccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKRCM  258 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~~~  258 (260)
                      .++.+.+++++|...++..|+.++
T Consensus       221 ~~~~l~~li~~~l~~~p~~R~~~~  244 (290)
T cd05580         221 FSPDAKDLIRNLLQVDLTKRLGNL  244 (290)
T ss_pred             CCHHHHHHHHHHccCCHHHccCcc
Confidence            356778999999999999998553

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=2.2e-29  Score=204.02  Aligned_cols=224  Identities=16%  Similarity=0.173  Sum_probs=154.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~   87 (260)
                      .+.+.+++.+.||+|++|.||+|.+. +..+++|.+.....         ..+.+.+|+.++++++|+|++    +....
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   73 (260)
T cd05069           3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---------MPEAFLQEAQIMKKLRHDKLVPLYAVVSEE   73 (260)
T ss_pred             CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---------cHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            34456888899999999999999985 45799997532211         135688899999999999998    22222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~  152 (260)
T cd05069          74 PIYIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLI  152 (260)
T ss_pred             CcEEEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEc
Confidence            2222       45666664432 334788888999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR--  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~--  232 (260)
                      ..........     ...+..    +.+|+..  ...+.++|+||+|++++++++ |..|+.   ..+....+.....  
T Consensus       153 ~~~~~~~~~~-----~~~~~~----y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05069         153 EDNEYTARQG-----AKFPIK----WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP  223 (260)
T ss_pred             cCCcccccCC-----Cccchh----hCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            3322111000     000111    2222222  457788999999999999998 766654   3344444443322  


Q ss_pred             --ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 --RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 --~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                        ...+..+.+++++|...++..|.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp  248 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERP  248 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCc
Confidence              22345667777777777777774

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=3e-29  Score=202.74  Aligned_cols=221  Identities=15%  Similarity=0.223  Sum_probs=158.7

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~   91 (260)
                      |++.+.||.|++|.||++.+.  ++++++|.+......      ....+.+.+|++++++++|+|++ +.+.   ....+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS------RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLL   75 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC------HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEE
Confidence            677899999999999999983  788999986433221      11245688899999999999999 3322   22222


Q ss_pred             ---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          92 ---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        92 ---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                               ++|.+++.... ...+++..++.++.|++.|+++||++|++|+||||+||+++.++.++|+|||++.....
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             EEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence                     34555554322 33578899999999999999999999999999999999999999999999999876543


Q ss_pred             cccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc----c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY----R  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~----~  232 (260)
                      ......           ...+.+.| +|+..  ..++.++|+||+|+++++++++..|+.   .......+..+.    +
T Consensus       155 ~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T cd08223         155 QCDMAS-----------TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMP  223 (257)
T ss_pred             cCCccc-----------cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCc
Confidence            321110           01112222 22222  456788999999999999999988865   344444444432    2


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rp~  247 (257)
T cd08223         224 KDYSPELGELIATMLSKRPEKRPS  247 (257)
T ss_pred             cccCHHHHHHHHHHhccCcccCCC
Confidence            233567899999999989888864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=1.8e-29  Score=216.06  Aligned_cols=192  Identities=15%  Similarity=0.175  Sum_probs=133.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-   82 (260)
                      ..+.+.+++.+.||+|+||.||+|++.       +..||||.+....       .....+.+.+|++++.++. ||||+ 
T Consensus        33 ~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~Ei~~l~~l~~HpnIv~  105 (400)
T cd05105          33 EFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-------RSSEKQALMSELKIMTHLGPHLNIVN  105 (400)
T ss_pred             eccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhcCCCCCeee
Confidence            344667889999999999999999863       2469999864321       1112467899999999996 99999 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCcc------------------------------------------------
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQNI------------------------------------------------  103 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~~------------------------------------------------  103 (260)
                      +++    ....++       ++|.+++..+..                                                
T Consensus       106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (400)
T cd05105         106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT  185 (400)
T ss_pred             EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence            322    222222       556555533210                                                


Q ss_pred             ---------------------------------------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy7935         104 ---------------------------------------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT  138 (260)
Q Consensus       104 ---------------------------------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp  138 (260)
                                                                   .+.+++..+..++.|++.||+|||+++|+||||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp  265 (400)
T cd05105         186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA  265 (400)
T ss_pred             cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence                                                         12366777888999999999999999999999999


Q ss_pred             CcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cc
Q psy7935         139 SNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-ED  215 (260)
Q Consensus       139 ~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~  215 (260)
                      +|||++.++.+||+|||++...........    .+....+..    +.+|+..  ..++.++|+||||++++++++ +.
T Consensus       266 ~Nill~~~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~----y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~  337 (400)
T cd05105         266 RNVLLAQGKIVKICDFGLARDIMHDSNYVS----KGSTFLPVK----WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGG  337 (400)
T ss_pred             HhEEEeCCCEEEEEeCCcceeccccccccc----cCCcCCCcc----eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCC
Confidence            999999999999999999876533221100    000111111    2233332  457889999999999999886 65


Q ss_pred             ccc
Q psy7935         216 KAV  218 (260)
Q Consensus       216 ~~~  218 (260)
                      .|+
T Consensus       338 ~P~  340 (400)
T cd05105         338 TPY  340 (400)
T ss_pred             CCC
Confidence            554

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.96  E-value=2.6e-29  Score=203.42  Aligned_cols=181  Identities=15%  Similarity=0.189  Sum_probs=126.8

Q ss_pred             eeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh---
Q psy7935          23 CFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI---   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~---   91 (260)
                      .||+|+||.||+|.+.    +..||+|+.....       .....+.+.+|+.++++++|+||+ +.+.   ....+   
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e   74 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-------EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVME   74 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc-------ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEE
Confidence            4899999999999873    4468999753321       111245788999999999999999 3322   22112   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          ++|.+++...  ...+++..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||++..........
T Consensus        75 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~  152 (257)
T cd05115          75 MASGGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY  152 (257)
T ss_pred             eCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence                4555555432  2357889999999999999999999999999999999999999999999999987543322110


Q ss_pred             ccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         168 VDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      ... ..+  ..+.    .+.+|+..  ..++.++|+||||++++++++ |..|+.
T Consensus       153 ~~~-~~~--~~~~----~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  200 (257)
T cd05115         153 KAR-SAG--KWPL----KWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYK  200 (257)
T ss_pred             ecc-CCC--CCCc----ccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcC
Confidence            000 000  0001    12233322  457789999999999999886 766653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.96  E-value=7e-30  Score=215.12  Aligned_cols=222  Identities=17%  Similarity=0.186  Sum_probs=150.2

Q ss_pred             cccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ..+.++|++.+.||+|+||.||+|.+       .++.||||.+.....       ......+.+|+.++.++ +|+|++ 
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~niv~   75 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-------HSEHRALMSELKILIHIGHHLNVVN   75 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-------hHHHHHHHHHHHHHHhccCCccHhh
Confidence            44567799999999999999999974       367899998643211       11134688899999999 689998 


Q ss_pred             EeC---CCchhh---------hhHHHhhccCcc-----------------------------------------------
Q psy7935          83 LDD---VQKSAI---------QTLISNLDSQNI-----------------------------------------------  103 (260)
Q Consensus        83 ~~~---~~~~~~---------~~l~~~l~~~~~-----------------------------------------------  103 (260)
                      +.+   .....+         ++|.+++.....                                               
T Consensus        76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (343)
T cd05103          76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE  155 (343)
T ss_pred             hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence            322   112221         556666543210                                               


Q ss_pred             -----------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935         104 -----------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus       104 -----------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                                       ...++...+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  235 (343)
T cd05103         156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY  235 (343)
T ss_pred             CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch
Confidence                             123577788889999999999999999999999999999999999999999998764322111


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc------------------------
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD------------------------  219 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~------------------------  219 (260)
                      .    ..+....+    ..+.+|+..  ..++.++|+||+|++++++++ |..|+.                        
T Consensus       236 ~----~~~~~~~~----~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (343)
T cd05103         236 V----RKGDARLP----LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT  307 (343)
T ss_pred             h----hcCCCCCC----cceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCC
Confidence            0    00000001    112233322  457789999999999999886 554432                        


Q ss_pred             ---HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ---FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ---~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                         ..+++.+|+...+.. |+++.++++.|..+
T Consensus       308 ~~~~~~~~~~cl~~~p~~-Rps~~eil~~l~~~  339 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQ-RPTFSELVEHLGNL  339 (343)
T ss_pred             CHHHHHHHHHHccCChhh-CcCHHHHHHHHHHH
Confidence               234455555544544 56777777777655

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.2e-29  Score=214.86  Aligned_cols=174  Identities=17%  Similarity=0.203  Sum_probs=128.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      ..|.+.+.||+|+||.||+|++.  +..||+|+...              .....|+.++++++|+||+ +    .....
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~--------------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  131 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK--------------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAI  131 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc--------------cccHHHHHHHHhCCCCCCcChhheEEeCCe
Confidence            34888999999999999999984  67899996311              1234688999999999999 2    22222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       132 ~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  209 (357)
T PHA03209        132 TCMVLPHYSSDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV  209 (357)
T ss_pred             eEEEEEccCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence            222      5666666443  24588899999999999999999999999999999999999999999999999864322


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      ....           .+..+...+.+|+..  ..++.++|+||+|+++++++++..
T Consensus       210 ~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~  254 (357)
T PHA03209        210 APAF-----------LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPS  254 (357)
T ss_pred             Cccc-----------ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCC
Confidence            1110           011112223334333  457889999999999999987543

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=2.8e-29  Score=207.18  Aligned_cols=235  Identities=10%  Similarity=0.116  Sum_probs=147.3

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHH------HHHHHHHHHHhhhcccCCC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEA------LTKERITSEIRGLMKCRMA   79 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~------~~~~~~~~e~~~l~~~~h~   79 (260)
                      .....+.|++.+.||+|+||.||+|.+.     +..+++|......   ......      ........+...+..+.|+
T Consensus         7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~   83 (294)
T PHA02882          7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETIVMETLVYNNIYDIDKIALWKNIHNIDHL   83 (294)
T ss_pred             eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---CchhhHHHHHHhhhhHHHHHHHHHhccCCCC
Confidence            3445567899999999999999999974     3466777532211   111110      0111233344556677899


Q ss_pred             CeE-EeCCCch------hh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc
Q psy7935          80 DIC-LDDVQKS------AI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS  144 (260)
Q Consensus        80 ~i~-~~~~~~~------~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~  144 (260)
                      |++ +++....      ..        ..+.+.+...   ...++..+..++.|++.||+|||+++|+||||||+|||++
T Consensus        84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~  160 (294)
T PHA02882         84 GIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD  160 (294)
T ss_pred             CCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence            988 3322110      00        1222222221   1346777888999999999999999999999999999999


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHH
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR  221 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~  221 (260)
                      .++.++|+|||+++......... . +...  ......+.+.| +++..  ..++.++|+||+|++++++++|..|+...
T Consensus       161 ~~~~~~l~DFGla~~~~~~~~~~-~-~~~~--~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        161 GNNRGYIIDYGIASHFIIHGKHI-E-YSKE--QKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             CCCcEEEEEcCCceeeccCCccc-c-cccc--cccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            99999999999997654321110 0 0000  00111222233 33322  45788999999999999999999997511


Q ss_pred             ------------HHHHHHHhhc--cccCCccHHHHHHHHHHhcccccc
Q psy7935         222 ------------DMFNWILSSY--RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       222 ------------~~~~~~~~~~--~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                                  +.+.++..+.  ....++.+.++++.+...++..|.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp  284 (294)
T PHA02882        237 GHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKP  284 (294)
T ss_pred             ccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCC
Confidence                        2223333221  223356678888888888877775

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=1.7e-29  Score=206.79  Aligned_cols=221  Identities=18%  Similarity=0.243  Sum_probs=154.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .++..+.||+|+||.||+|.+  +++.||+|.+.... .      ......+.+|++++.+++|||++ +++.  .....
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-T------VELQKQIMSELEILYKCDSPYIIGFYGAFFVENRI   74 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-C------hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEE
Confidence            467789999999999999997  48899999864321 1      11235688999999999999999 3322  12223


Q ss_pred             hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 ~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +.+++|+.+..+  ...+++..+..++.|++.||+|||++||+|+||||+|||++.++.++|+|||++..........  
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~--  152 (279)
T cd06619          75 SICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKT--  152 (279)
T ss_pred             EEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccC--
Confidence            346777766543  2246788888999999999999999999999999999999999999999999987553321110  


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH----------HHHHHHHHhhccc----
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF----------RDMFNWILSSYRR----  233 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----  233 (260)
                                ..+...+.+|+..  ..++.++|+||+|++++++++|..|+..          ....+......+.    
T Consensus       153 ----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (279)
T cd06619         153 ----------YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPV  222 (279)
T ss_pred             ----------CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCC
Confidence                      0111112233322  4577899999999999999999888642          1111211111111    


Q ss_pred             -cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..++.+.+++.+|...++..|..
T Consensus       223 ~~~~~~~~~li~~~l~~~P~~Rp~  246 (279)
T cd06619         223 GQFSEKFVHFITQCMRKQPKERPA  246 (279)
T ss_pred             CcCCHHHHHHHHHHhhCChhhCCC
Confidence             12345678888888777777753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=4.3e-29  Score=201.62  Aligned_cols=221  Identities=20%  Similarity=0.205  Sum_probs=158.8

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |...+.||+|++|.||+|++  +++.|++|.+......      ......+.+|++++++++|||++ +++    ....+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN------RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLN   75 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC------HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEE
Confidence            55678999999999999998  4889999986543222      12346788999999999999999 222    22222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus        76 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence            2       45666665432 345788888999999999999999999999999999999999999999999998765443


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc----
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR----  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----  233 (260)
                      .....           ...+.+.|.+++.   ..++.++|+||||++++++++|..|+.   ..+.......+...    
T Consensus       155 ~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd08529         155 TNFAN-----------TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQ  223 (256)
T ss_pred             cchhh-----------ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            21110           0111222322222   346789999999999999999988876   33334444443221    


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~  246 (256)
T cd08529         224 MYSQQLAQLIDQCLTKDYRQRPD  246 (256)
T ss_pred             ccCHHHHHHHHHHccCCcccCcC
Confidence            22456788888888888888864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG4250|consensus

Probab=99.96  E-value=4.5e-30  Score=220.84  Aligned_cols=188  Identities=20%  Similarity=0.257  Sum_probs=141.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCCch-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQKS-   89 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~-   89 (260)
                      .+......+.||+|+||.||+++.  +|+.||||.........       ..+.-.+|++++++++|+||| .++..+. 
T Consensus        11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r-------~~e~~~~EieilkKLnh~NIVk~f~iee~~   83 (732)
T KOG4250|consen   11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR-------PRERWCREIEILKKLNHPNIVKLFDIEETK   83 (732)
T ss_pred             CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc-------hHHHHHHHHHHHHHcCchhhhhhcccCCcc
Confidence            333445568999999999999997  59999999854432111       245678899999999999999 3332211 


Q ss_pred             h--h--------------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc----CCcE
Q psy7935          90 A--I--------------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS----DHHL  149 (260)
Q Consensus        90 ~--~--------------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~----~~~~  149 (260)
                      .  .              |+|...++.-.....+++.+++.++.+++.||.|||++||+||||||.||++-.    ....
T Consensus        84 ~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~Iy  163 (732)
T KOG4250|consen   84 FLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIY  163 (732)
T ss_pred             ccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEE
Confidence            1  1              555555544332445999999999999999999999999999999999999975    3368


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||+|||.|+...+..           .+.++.++..+..|+-+   ++++...|.||||+++|+..||..|+.
T Consensus       164 KLtDfG~Arel~d~s-----------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~  225 (732)
T KOG4250|consen  164 KLTDFGAARELDDNS-----------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI  225 (732)
T ss_pred             eeecccccccCCCCC-----------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence            999999998776653           12233344444444433   578889999999999999999999877

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.96  E-value=3e-29  Score=202.96  Aligned_cols=217  Identities=16%  Similarity=0.171  Sum_probs=147.0

Q ss_pred             eeccCCceeEEEEEE----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCchhh---
Q psy7935          23 CFKQGAEGRIFKTEY----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKSAI---   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~~~---   91 (260)
                      +||+|+||.||+|.+    .++.+|+|++.... .     .....+.+.+|+.+++++.|+||+ +++   .....+   
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-N-----DPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-C-----cHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEe
Confidence            689999999999975    36889999754221 1     112246788999999999999999 332   222222   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++..........
T Consensus        76 ~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~  152 (257)
T cd05116          76 LAELGPLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY  152 (257)
T ss_pred             cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence                4566665432   357889999999999999999999999999999999999999999999999987654332110


Q ss_pred             ccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc----cccCCc
Q psy7935         168 VDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY----RRQNRK  237 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~----~~~~~~  237 (260)
                      ..   ......    ...+.+|+..  ..++.++|+||||++++++++ |..|+.   ..++.+.+..+.    +...++
T Consensus       153 ~~---~~~~~~----~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~  225 (257)
T cd05116         153 KA---KTHGKW----PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPP  225 (257)
T ss_pred             ee---cCCCCC----CccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCH
Confidence            00   000000    0112233333  456779999999999999997 777754   333333333321    122345


Q ss_pred             cHHHHHHHHHHhcccccc
Q psy7935         238 QFETVMKTFAEVELRGRK  255 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~  255 (260)
                      .+.+++.+|...++..|.
T Consensus       226 ~l~~li~~~~~~~p~~Rp  243 (257)
T cd05116         226 EMYDLMKLCWTYGVDERP  243 (257)
T ss_pred             HHHHHHHHHhccCchhCc
Confidence            566777777666666664

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=4.8e-29  Score=202.56  Aligned_cols=186  Identities=17%  Similarity=0.187  Sum_probs=134.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~   89 (260)
                      .|+..+.||+|+||.||+|.+  +|++|++|.+........     ...+.+.+|++++++++|+|++ ++    +....
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~   77 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDA-----KARQDCLKEIDLLKQLDHPNVIKYLASFIENNEL   77 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccch-----hhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence            477789999999999999998  489999998643322211     1246788999999999999998 22    22222


Q ss_pred             hh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .+       ++|.+++..... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        78 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          78 NIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            11       455555533211 2347888999999999999999999999999999999999999999999999986543


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ........          . .+.+.| +|+..  ..++.++|+||+|+++++++++..|+
T Consensus       158 ~~~~~~~~----------~-~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  206 (267)
T cd08224         158 SKTTAAHS----------L-VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  206 (267)
T ss_pred             CCCcccce----------e-cCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCc
Confidence            32111100          0 011112 23322  44677899999999999999987765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=3.2e-29  Score=205.23  Aligned_cols=216  Identities=16%  Similarity=0.233  Sum_probs=149.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCcc----EEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRS----VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ..|+..+.||+|+||.||+|.+  .+..    +++|....     ..  .......+..|+..+.++.||||+ +++.  
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~-----~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~   79 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD-----RS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICP   79 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccc-----cc--chHHHHHHHHHHHHHhcCCCCCcceEEEEEC
Confidence            4577889999999999999998  3553    56665321     11  111234677888889999999999 3222  


Q ss_pred             -Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 -QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 -~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       ....+       ++|.+++...  ...+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||+++
T Consensus        80 ~~~~~~i~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~  157 (279)
T cd05111          80 GASLQLVTQLSPLGSLLDHVRQH--RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVAD  157 (279)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccce
Confidence             11111       6777777543  2357888999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      .........    .......+..    +.+|+..  ..++.++|+||||++++++++ |..|+.                
T Consensus       158 ~~~~~~~~~----~~~~~~~~~~----y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  229 (279)
T cd05111         158 LLYPDDKKY----FYSEHKTPIK----WMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGER  229 (279)
T ss_pred             eccCCCccc----ccCCCCCccc----ccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc
Confidence            653322110    0000001111    2233322  457889999999999999987 655432                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                ..+++.+|+...+.. ||++.++++.+..+
T Consensus       230 ~~~~~~~~~~~~~li~~c~~~~p~~-Rps~~el~~~l~~~  268 (279)
T cd05111         230 LAQPQICTIDVYMVMVKCWMIDENV-RPTFKELANEFTRM  268 (279)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHH
Confidence                      234566777755555 67888888877654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=5.3e-29  Score=205.21  Aligned_cols=190  Identities=18%  Similarity=0.210  Sum_probs=133.6

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-E
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-L   83 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~   83 (260)
                      ...+.|++.+.||+|+||.||++.+.       ...+++|.+.... .     .. ....+.+|++++.++ +|+||+ +
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~-----~~-~~~~~~~E~~~l~~l~~h~~i~~~   81 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-T-----EK-DLSDLVSEMEMMKMIGKHKNIINL   81 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-C-----HH-HHHHHHHHHHHHHhhcCCCCeeeE
Confidence            34456888999999999999999873       2578999753221 1     11 134588999999999 799999 2


Q ss_pred             eC----CCchhh-------hhHHHhhccCc-------------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy7935          84 DD----VQKSAI-------QTLISNLDSQN-------------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTS  139 (260)
Q Consensus        84 ~~----~~~~~~-------~~l~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~  139 (260)
                      ++    ....++       ++|.+++....             ....+++..++.++.|++.||+|||+++|+||||||+
T Consensus        82 ~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~  161 (293)
T cd05053          82 LGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAAR  161 (293)
T ss_pred             EEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccccee
Confidence            22    111111       56666664321             1345888999999999999999999999999999999


Q ss_pred             cEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccc
Q psy7935         140 NMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDK  216 (260)
Q Consensus       140 Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~  216 (260)
                      ||+++.++.+||+|||++.............  .+.      ....+.+|+..  ..++.++|+||||++++++++ |..
T Consensus       162 Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~--~~~------~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~  233 (293)
T cd05053         162 NVLVTEDHVMKIADFGLARDIHHIDYYRKTT--NGR------LPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS  233 (293)
T ss_pred             eEEEcCCCeEEeCccccccccccccceeccC--CCC------CCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCC
Confidence            9999999999999999997654332111000  000      00112233333  457889999999999999886 555


Q ss_pred             c
Q psy7935         217 A  217 (260)
Q Consensus       217 ~  217 (260)
                      |
T Consensus       234 p  234 (293)
T cd05053         234 P  234 (293)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1e-29  Score=220.30  Aligned_cols=175  Identities=18%  Similarity=0.245  Sum_probs=129.6

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~   89 (260)
                      .|.+.+.||+|+||.||+|.+.  ++.||||...              ...+.+|+.++++++|+||+ +++.    ...
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~  235 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------------YASSVHEARLLRRLSHPAVLALLDVRVVGGLT  235 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEE
Confidence            4788999999999999999984  7889999521              12356899999999999999 3321    111


Q ss_pred             hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ++      ++|.+++...  ...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       236 ~lv~e~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        236 CLVLPKYRSDLYTYLGAR--LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             EEEEEccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence            11      5666666543  235889999999999999999999999999999999999999999999999999765332


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      ......        ..+.++..+.+++..  ..++.++|+||||+++++++++.
T Consensus       314 ~~~~~~--------~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~  359 (461)
T PHA03211        314 WSTPFH--------YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHT  359 (461)
T ss_pred             cccccc--------cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcC
Confidence            111100        011122223333333  45788999999999999987754

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=1.4e-29  Score=207.64  Aligned_cols=221  Identities=18%  Similarity=0.217  Sum_probs=152.4

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |+..+.||+|+||.||+|++  +|+.+++|.+....... .     ....+.+|++++++++|+|++     +.+....+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-~-----~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-G-----VPSSALREICLLKELKHKNIVRLYDVLHSDKKLT   75 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc-c-----CccchhHHHHHHHhcCCCCeeeHHHHhccCCceE
Confidence            67789999999999999998  48899999865432211 1     124577899999999999999     22222222


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      +++.+++...  ...+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.......
T Consensus        76 lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          76 LVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             EEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence            2      4455554332  2358899999999999999999999999999999999999999999999999987543321


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc----HHHHHHHHHhh-------
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSS-------  230 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~-------  230 (260)
                      ....      ...    ....+.+|+..   ..++.++|+||+|++++++++|..|+.    ..+..+.+...       
T Consensus       154 ~~~~------~~~----~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  223 (284)
T cd07839         154 RCYS------AEV----VTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE  223 (284)
T ss_pred             CCcC------CCc----cccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChH
Confidence            1100      000    11112233322   235788999999999999999987742    22222211110       


Q ss_pred             -------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                               .....++.+.+++++|...++..|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t  274 (284)
T cd07839         224 SWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS  274 (284)
T ss_pred             HhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC
Confidence                                     01122456678899999888888864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG4645|consensus

Probab=99.96  E-value=2e-29  Score=228.59  Aligned_cols=225  Identities=13%  Similarity=0.182  Sum_probs=164.3

Q ss_pred             CcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhhhh
Q psy7935          19 QPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQT   93 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~~   93 (260)
                      +-...||.|.||.||-|..  +|.-.|+|.+......      ...-+...+|..++..++|||++ +++.  ..-.++.
T Consensus      1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~------~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD------HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred             ccccccCCcceeeeEEeecCCccchhhhhhhhcCccc------cccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence            3467899999999999996  5889999986544332      11235577899999999999999 4443  3444577


Q ss_pred             HHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          94 LISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        94 l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                      .|+||+++.+      ++..++.....+..|++.|++|||++||+||||||+||+++.+|.+|++|||.|........  
T Consensus      1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~-- 1389 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ-- 1389 (1509)
T ss_pred             HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh--
Confidence            9999998776      56688888888999999999999999999999999999999999999999999976544311  


Q ss_pred             ccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhccccCC--
Q psy7935         168 VDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYRRQNR--  236 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--  236 (260)
                          .++..+-.+.+++-+++|+..     ..-.-+.||||+||+.+||.||+.|+.    -..++-.+-.++-++.+  
T Consensus      1390 ----~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ 1465 (1509)
T KOG4645|consen 1390 ----TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPER 1465 (1509)
T ss_pred             ----cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchh
Confidence                112222334444444555544     234457999999999999999999977    22334444444433322  


Q ss_pred             --ccHHHHHHHHHHhcccccc
Q psy7935         237 --KQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       237 --~~~~~il~~l~~~~~~~r~  255 (260)
                        +.-.+++++|.+-+++.|.
T Consensus      1466 ls~~g~dFle~Cl~~dP~~Rw 1486 (1509)
T KOG4645|consen 1466 LSSEGRDFLEHCLEQDPKMRW 1486 (1509)
T ss_pred             hhHhHHHHHHHHHhcCchhhh
Confidence              2336777777777776664

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=1.8e-29  Score=207.05  Aligned_cols=186  Identities=18%  Similarity=0.221  Sum_probs=133.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |.+.+.||+|++|.||+|++  ++..||+|.+.......      .....+.+|+.++++++|||++ ++    +....+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   75 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE------GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLY   75 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC------CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEE
Confidence            56789999999999999998  48899999864322111      1135678899999999999999 22    222222


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      +++.+++........+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            2      3444444332223468899999999999999999999999999999999999999999999999986543321


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...      .....+.    .+.+|+..   ..++.++|+||+|++++++++|+.|+.
T Consensus       156 ~~~------~~~~~~~----~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~  203 (285)
T cd07861         156 RVY------THEVVTL----WYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH  203 (285)
T ss_pred             ccc------cCCcccc----cccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            110      0001111    12223322   235778999999999999999977764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=4.4e-29  Score=204.54  Aligned_cols=188  Identities=19%  Similarity=0.230  Sum_probs=134.0

Q ss_pred             cccCcceeeccCCceeEEEEEEc------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ..++..+.||+|+||.||+|++.      ++.+|+|.+......       .....+.+|+++++.+.|+|++ +.+.  
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-------~~~~~~~~ei~~l~~l~~~~i~~~~~~~~   76 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-------QHRSDFEREIEILRTLDHENIVKYKGVCE   76 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-------HHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence            45777899999999999999863      679999986432211       1246789999999999999998 3221  


Q ss_pred             --Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          87 --QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        87 --~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                        .....         ++|.+++...  ...++...+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg  154 (284)
T cd05038          77 KPGGRSLRLIMEYLPSGSLRDYLQRH--RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFG  154 (284)
T ss_pred             cCCCCceEEEEecCCCCCHHHHHHhC--ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccc
Confidence              12222         4555555432  2247888889999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++...........    ....   ......+++|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       155 ~~~~~~~~~~~~~----~~~~---~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~  213 (284)
T cd05038         155 LAKVLPEDKDYYY----VKEP---GESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ  213 (284)
T ss_pred             cccccccCCccee----ccCC---CCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence            9976653221100    0000   0000112233322  456788999999999999999876643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=3.9e-29  Score=203.24  Aligned_cols=186  Identities=15%  Similarity=0.156  Sum_probs=131.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      +.|...+.||+|+||.||+|.+.     ...|++|.+....       .......+.+|+.++++++||||+ +.+    
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-------SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK   76 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec
Confidence            45778899999999999999973     3478999753221       111245688999999999999998 322    


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..+..++.|++.|++|||+++|+|+||||+||+++.++.++|+|||++.
T Consensus        77 ~~~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~  154 (266)
T cd05033          77 SRPVMIITEYMENGSLDKFLREN--DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (266)
T ss_pred             CCceEEEEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhh
Confidence            122122       4555555432  2257888999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ............    .......    +.+|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       155 ~~~~~~~~~~~~----~~~~~~~----y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~  209 (266)
T cd05033         155 RLEDSEATYTTK----GGKIPIR----WTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPY  209 (266)
T ss_pred             cccccccceecc----CCCCCcc----ccChhhhccCCCccccchHHHHHHHHHHHccCCCCC
Confidence            764221110000    0000111    2223322  456789999999999999887 76654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.96  E-value=3.8e-29  Score=203.00  Aligned_cols=221  Identities=16%  Similarity=0.233  Sum_probs=149.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      ..++..+.||+|+||.||+|.+.  ++.|++|.+....     .    ....+.+|++++++++|+|++ +++    ...
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-----~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----M----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   76 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-----h----HHHHHHHHHHHHHhCCCCChhheEEEEcCCCC
Confidence            34677899999999999999984  8899999753211     0    135688999999999999999 222    111


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++.... ...+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++....
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~  155 (263)
T cd05052          77 FYIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT  155 (263)
T ss_pred             cEEEEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccc
Confidence            111       56666664432 2347888888899999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcccc-
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYRRQ-  234 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~-  234 (260)
                      ........     ....+..    +.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+....+....... 
T Consensus       156 ~~~~~~~~-----~~~~~~~----y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  226 (263)
T cd05052         156 GDTYTAHA-----GAKFPIK----WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMER  226 (263)
T ss_pred             cceeeccC-----CCCCccc----cCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence            32111100     0000111    2233322  457788999999999999998 665543   333334433322211 


Q ss_pred             ---CCccHHHHHHHHHHhcccccc
Q psy7935         235 ---NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ---~~~~~~~il~~l~~~~~~~r~  255 (260)
                         .++.+.+++.+|...++..|.
T Consensus       227 ~~~~~~~~~~li~~cl~~~p~~Rp  250 (263)
T cd05052         227 PEGCPPKVYELMRACWQWNPSDRP  250 (263)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCC
Confidence               224456666666666665554

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=2.7e-29  Score=214.91  Aligned_cols=192  Identities=17%  Similarity=0.174  Sum_probs=133.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-   82 (260)
                      +.+.+.+.+.+.||+|+||.||+|++.       +++||+|++.....  .     ...+.+.+|+.++.++. ||||+ 
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~-----~~~~~~~~E~~~l~~l~~H~niv~  105 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--S-----SEKQALMSELKIMSHLGPHLNIVN  105 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--h-----hHHHHHHHHHHHHHhcCCCCCeEE
Confidence            344455788899999999999999863       35899998643211  1     11346889999999997 99999 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCcc------------------------------------------------
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQNI------------------------------------------------  103 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~~------------------------------------------------  103 (260)
                      +++    ....++       ++|.+++.....                                                
T Consensus       106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (401)
T cd05107         106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE  185 (401)
T ss_pred             EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence            222    122122       677777653210                                                


Q ss_pred             -----------------------------------------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935         104 -----------------------------------------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus       104 -----------------------------------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                                                                     ...++...+..++.|++.||+|||+++++||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl  265 (401)
T cd05107         186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL  265 (401)
T ss_pred             ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence                                                           123566778889999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-  213 (260)
                      ||+|||++.++.+||+|||+++..........    .+....+.    .+.+|+..  ..++.++|+||||++++++++ 
T Consensus       266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~----~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~  337 (401)
T cd05107         266 AARNVLICEGKLVKICDFGLARDIMRDSNYIS----KGSTFLPL----KWMAPESIFNNLYTTLSDVWSFGILLWEIFTL  337 (401)
T ss_pred             CcceEEEeCCCEEEEEecCcceeccccccccc----CCCcCCCC----ceeChHHhcCCCCCcHhHHHHHHHHHHHHHHc
Confidence            99999999999999999999876432211100    00011111    12233322  446788999999999999987 


Q ss_pred             ccccc
Q psy7935         214 EDKAV  218 (260)
Q Consensus       214 ~~~~~  218 (260)
                      +..|+
T Consensus       338 g~~P~  342 (401)
T cd05107         338 GGTPY  342 (401)
T ss_pred             CCCCC
Confidence            65554

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=3.4e-29  Score=205.06  Aligned_cols=189  Identities=16%  Similarity=0.187  Sum_probs=134.8

Q ss_pred             ccccCcceeeccCCceeEEEEEEc------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      .+.|++.+.||+|+||.||+|.+.      +..|++|.+...       ........+.+|+.++++++|+|++ +++. 
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-------~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   77 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-------ASEIQVTLLLQESCLLYGLSHQNILPILHVC   77 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            456778899999999999999974      478888874311       1111246688999999999999998 2221 


Q ss_pred             ----Cchhh-------hhHHHhhccCccc-----ccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          87 ----QKSAI-------QTLISNLDSQNIT-----RENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        87 ----~~~~~-------~~l~~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                          ....+       ++|.+++......     ..+++..++.++.|++.||+|||+++++|+||||+||+++.++.+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k  157 (280)
T cd05043          78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK  157 (280)
T ss_pred             ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence                11111       6777777543221     4588999999999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      |+|||+++............    .    ......+.+|+..  ..++.++|+||+|++++++++ |+.|+
T Consensus       158 l~d~g~~~~~~~~~~~~~~~----~----~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~  220 (280)
T cd05043         158 ITDNALSRDLFPMDYHCLGD----N----ENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPY  220 (280)
T ss_pred             ECCCCCcccccCCceEEeCC----C----CCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCc
Confidence            99999997553322110000    0    0001112233332  447889999999999999988 65554

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.5e-29  Score=203.26  Aligned_cols=220  Identities=15%  Similarity=0.211  Sum_probs=152.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh-
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI-   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~-   91 (260)
                      .+++.+.||+|+||.||+|.+. +..+++|.+.....         ....+.+|+++++.++|+|++ +++.  ..... 
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM---------SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIF   75 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC---------CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceE
Confidence            4677899999999999999985 56899997542221         124577899999999999999 3221  11222 


Q ss_pred             --------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          92 --------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 --------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                              ++|.+++...  ...+++..++.++.|++.|++|||+++++||||||+||+++.++.+||+|||+++.....
T Consensus        76 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~  153 (256)
T cd05059          76 IVTEYMANGCLLNYLRER--KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD  153 (256)
T ss_pred             EEEecCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccc
Confidence                    4455555432  225788889999999999999999999999999999999999999999999998755332


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----c
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----R  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~  233 (260)
                      ......     .......    +.+|+..  ..++.++|+||+|++++++++ +..|+.   ..+....+.....    .
T Consensus       154 ~~~~~~-----~~~~~~~----y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T cd05059         154 QYTSSQ-----GTKFPVK----WAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPK  224 (256)
T ss_pred             cccccC-----CCCCCcc----ccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCC
Confidence            111100     0000011    2223222  457789999999999999998 666654   3444455444322    2


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~li~~cl~~~p~~Rpt  247 (256)
T cd05059         225 LAPTEVYTIMYSCWHEKPEDRPA  247 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcC
Confidence            23456788888888777777753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=7.9e-29  Score=200.80  Aligned_cols=225  Identities=17%  Similarity=0.203  Sum_probs=155.9

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDV   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~   86 (260)
                      +.+.+.+++.+.||+|+||.||++.++ +..+++|.+....     .    ....+.+|++++++++|+|++ +   ...
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-----~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   72 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----M----SVEAFLAEANVMKTLQHDKLVKLHAVVTK   72 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-----h----HHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence            456777899999999999999999874 6679999743211     1    235688999999999999999 2   222


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ....+...+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||.+..
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~  151 (260)
T cd05073          73 EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV  151 (260)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceee
Confidence            21111       45666664432 33467788888999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ...........     ......    +.+|+..  ..++.++|+||+|++++++++ |..|+.   ..++...+..... 
T Consensus       152 ~~~~~~~~~~~-----~~~~~~----y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~  222 (260)
T cd05073         152 IEDNEYTAREG-----AKFPIK----WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM  222 (260)
T ss_pred             ccCCCcccccC-----Cccccc----ccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC
Confidence            54322111000     000011    2223322  457888999999999999998 777654   3334443333222 


Q ss_pred             ---ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         ...+..+.+++.+|...++..|.
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp  248 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERP  248 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCc
Confidence               12235567778888777777775

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG3653|consensus

Probab=99.96  E-value=1.7e-30  Score=214.18  Aligned_cols=182  Identities=19%  Similarity=0.190  Sum_probs=142.2

Q ss_pred             cccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhc--ccCCCCeE-EeCCCchhh-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLM--KCRMADIC-LDDVQKSAI-   91 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~--~~~h~~i~-~~~~~~~~~-   91 (260)
                      .-++.++.+|+|.||.||+|...++.||||++...           .++.+.+|-++++  .++|+||+ |+...+... 
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~-----------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~  278 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ-----------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA  278 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHH-----------HHHHHHhHHHHHhccCccchhHHHhhchhccCCc
Confidence            34677899999999999999999999999985321           1455666666655  66899999 655443322 


Q ss_pred             --------------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh---------CCceecCCCCCcEEEccCCc
Q psy7935          92 --------------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS---------NNIIHGDLTTSNMILSSDHH  148 (260)
Q Consensus        92 --------------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~---------~~i~H~dlkp~Nill~~~~~  148 (260)
                                    |+|.+|+..+.    .++....+++..+++||+|||+         ..|+|||||.+|||+.+|++
T Consensus       279 ~~~eywLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlT  354 (534)
T KOG3653|consen  279 DRMEYWLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLT  354 (534)
T ss_pred             cccceeEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCc
Confidence                          99999999885    8999999999999999999996         26999999999999999999


Q ss_pred             EEEEeecccccccccccccccccccccceeeeeeeeeecCccccccc----cccceeEeecceeeeeccccc
Q psy7935         149 LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSY----NHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~di~s~g~~~~~~~~~~~  216 (260)
                      +.|+|||+|..+....... |.  .+ ..++..+++|+...+.....    -.+.||||+|+++||+.++..
T Consensus       355 ccIaDFGLAl~~~p~~~~~-d~--~~-qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~  422 (534)
T KOG3653|consen  355 CCIADFGLALRLEPGKPQG-DT--HG-QVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCT  422 (534)
T ss_pred             EEeeccceeEEecCCCCCc-ch--hh-hhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999998876544322 11  11 55666677776666555433    345999999999999887643

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=2.8e-29  Score=210.16  Aligned_cols=190  Identities=11%  Similarity=0.081  Sum_probs=131.7

Q ss_pred             cceeeccC--CceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          20 PAECFKQG--AEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        20 ~~~~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      +++.||+|  +|+.||++++  +|+.||+|.+.......      .....+.+|+.+++.++||||+     +......+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN------EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH------HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEE
Confidence            46789999  6789999998  48999999864432211      1234677899999999999999     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.++++||+........
T Consensus        76 lv~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~  154 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINH  154 (327)
T ss_pred             EEEeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccc
Confidence            2       45555554322 234788899999999999999999999999999999999999999999999865433221


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......-..+.   ......++.+|+..    ..++.++|+||+|++++++++|..|+.
T Consensus       155 ~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  211 (327)
T cd08227         155 GQRLRVVHDFPK---YSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  211 (327)
T ss_pred             cccccccccccc---cccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            110000000000   01112223444443    347889999999999999999988865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.96  E-value=5.7e-29  Score=201.16  Aligned_cols=220  Identities=17%  Similarity=0.206  Sum_probs=150.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---C-Cch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---V-QKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~-~~~   89 (260)
                      +.|++.+.||+|+||.||++.+. +..+|+|.+.....         ....+.+|++++++++||||+ +++   . ...
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPL   74 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---------cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCE
Confidence            34777899999999999999985 56899997532211         134688899999999999999 222   1 111


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++....  ..+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||.+.....
T Consensus        75 ~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05114          75 YIVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD  152 (256)
T ss_pred             EEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCC
Confidence            12       55666554322  2478888999999999999999999999999999999999999999999998875432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----  232 (260)
                      .......     ......    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+....+..+.+    
T Consensus       153 ~~~~~~~-----~~~~~~----~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~  223 (256)
T cd05114         153 DEYTSSS-----GAKFPV----KWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP  223 (256)
T ss_pred             CceeccC-----CCCCch----hhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence            2111100     000001    12233322  456789999999999999998 666654   3344444443322    


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...+..+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~li~~c~~~~p~~Rp  246 (256)
T cd05114         224 KLASMTVYEVMYSCWHEKPEGRP  246 (256)
T ss_pred             CCCCHHHHHHHHHHccCCcccCc
Confidence            22234456777777766666664

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1e-28  Score=200.06  Aligned_cols=224  Identities=17%  Similarity=0.211  Sum_probs=156.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      ...+.|.+.+.||+|+||.||+|.+. +..+++|.+.....         ....+.+|+.++++++|+|++ +++.  ..
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   73 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE   73 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---------CHHHHHHHHHHHhhCCCCCEeeeeeeeecC
Confidence            45667888999999999999999974 57899997543221         135688999999999999999 3322  11


Q ss_pred             hhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          89 SAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...         ++|.+++.... ...++...+..++.|++.|+.|||+++++|+||||+||+++.++.++|+|||++..
T Consensus        74 ~~~~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~  152 (261)
T cd05034          74 EPIYIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARL  152 (261)
T ss_pred             CceEEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECcccccee
Confidence            122         45555554432 34578888999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ..........     ......    .+.+|+..  ...++++|+||+|++++++++ |+.|+.   ..+..+.+..... 
T Consensus       153 ~~~~~~~~~~-----~~~~~~----~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~  223 (261)
T cd05034         153 IEDDEYTARE-----GAKFPI----KWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM  223 (261)
T ss_pred             ccchhhhhhh-----ccCCCc----cccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            5432110000     000001    12223222  457788999999999999998 776654   3445555544332 


Q ss_pred             ---ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         ...+..+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp  249 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERP  249 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCC
Confidence               22245667777787777777774

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.1e-28  Score=199.49  Aligned_cols=217  Identities=17%  Similarity=0.209  Sum_probs=143.9

Q ss_pred             eeeccCCceeEEEEEEc--C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh-
Q psy7935          22 ECFKQGAEGRIFKTEYL--G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI-   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~-   91 (260)
                      +.||+|+||.||+|.+.  +   ..+++|.+......       ...+.+.+|+.+++.+.|+|++ +++.   ....+ 
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   73 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-------AGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLV   73 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-------HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEE
Confidence            46899999999999873  2   67999975432211       1246788999999999999999 3322   11111 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                            ++|.+++....   .+++..+..++.|++.||+|||+++++|+||||+|||++.++.+||+|||+++.......
T Consensus        74 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~  150 (257)
T cd05060          74 MELAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD  150 (257)
T ss_pred             EEeCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc
Confidence                  45666665432   578899999999999999999999999999999999999999999999999876543221


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----ccC
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----RQN  235 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~~~  235 (260)
                      ....   .....++.    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..++...+....+    ...
T Consensus       151 ~~~~---~~~~~~~~----~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T cd05060         151 YYRA---TTAGRWPL----KWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEEC  223 (257)
T ss_pred             cccc---ccCccccc----cccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCC
Confidence            1000   00000001    12333333  457889999999999999997 776653   2222222222211    112


Q ss_pred             CccHHHHHHHHHHhcccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~  255 (260)
                      ++.+.+++.+|...++..|.
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp  243 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRP  243 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCc
Confidence            23445555555555555553

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=6.8e-29  Score=203.62  Aligned_cols=188  Identities=16%  Similarity=0.178  Sum_probs=131.7

Q ss_pred             cccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----   84 (260)
                      +.+++.+.||+|+||.||+|..      .+..+++|.+....       .......+.+|++++++++|||++ +.    
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   77 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-------NPQQWGEFQQEASLMAELHHPNIVCLLGVVT   77 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe
Confidence            3467789999999999999985      25789999753221       111235688999999999999999 22    


Q ss_pred             CCCchhh-------hhHHHhhccCcc--------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE
Q psy7935          85 DVQKSAI-------QTLISNLDSQNI--------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL  143 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~--------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill  143 (260)
                      .....++       ++|.+++.....              ...+++..+..++.|++.||+|||+++++||||||+|||+
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili  157 (283)
T cd05090          78 QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI  157 (283)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE
Confidence            2222222       466666532210              1236788888999999999999999999999999999999


Q ss_pred             ccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         144 SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       144 ~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      +.++.+||+|||+++...........    +....+..+    .+|+..  ..++.++|+||||++++++++ |..|+
T Consensus       158 ~~~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~y----~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~  227 (283)
T cd05090         158 GEQLHVKISDLGLSREIYSADYYRVQ----PKSLLPIRW----MPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPY  227 (283)
T ss_pred             cCCCcEEeccccccccccCCcceecc----cCCCcccee----cChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence            99999999999999765432211100    000111112    223322  457889999999999999998 65554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.96  E-value=1.1e-28  Score=204.54  Aligned_cols=215  Identities=14%  Similarity=0.233  Sum_probs=144.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc--Ccc--EEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--C
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRS--VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--Q   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~   87 (260)
                      +.|++.+.||+|+||.||+|.+.  +..  +++|...  ...     .......+.+|++++.++ +|+|++ +++.  .
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~--~~~-----~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~   79 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMK--EYA-----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH   79 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEec--ccC-----CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence            34778899999999999999973  443  4666432  111     111245688899999999 899998 2221  1


Q ss_pred             chhh---------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          88 KSAI---------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        88 ~~~~---------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      ....         ++|.+++.....             ...+++..++.++.|++.|++|||++|++||||||+|||++.
T Consensus        80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~  159 (303)
T cd05088          80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  159 (303)
T ss_pred             CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence            1222         456665543211             124788899999999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---  219 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---  219 (260)
                      ++.+||+|||++...........       ......    +.+|+..  ..+++++|+||+|++++++++ |..|+.   
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~-------~~~~~~----y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  228 (303)
T cd05088         160 NYVAKIADFGLSRGQEVYVKKTM-------GRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT  228 (303)
T ss_pred             CCcEEeCccccCcccchhhhccc-------CCCccc----ccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence            99999999999853221110000       000011    1222222  346789999999999999987 555432   


Q ss_pred             -----------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 -----------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 -----------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                             ..+++.+|+...+.. |+++.+++..+.++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~-Rp~~~~il~~l~~~  280 (303)
T cd05088         229 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYE-RPSFAQILVSLNRM  280 (303)
T ss_pred             hHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHH
Confidence                                   345666666655554 56667777766654

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.96  E-value=4.3e-29  Score=204.75  Aligned_cols=186  Identities=15%  Similarity=0.182  Sum_probs=130.6

Q ss_pred             ccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.+.+.||.|+||.||+|++.       +..||+|++....       .......+.+|+.++..++||||+ +++   
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~   78 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-------EGPLREEFKHEAMMRSRLQHPNIVCLLGVVT   78 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence            4677899999999999999863       4789999854221       111245688999999999999998 322   


Q ss_pred             -CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS  144 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~  144 (260)
                       .....+       ++|.+++.....             ...+++..+..++.|++.||+|||++||+||||||+|||++
T Consensus        79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~  158 (283)
T cd05091          79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF  158 (283)
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence             111111       556666532110             22477888899999999999999999999999999999999


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccc
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKA  217 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~  217 (260)
                      .++.+||+|||+++.........    ..+...    ....+++|+..  ..++.++|+||+|++++++++ |..|
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~~~----~~~~~~----~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p  226 (283)
T cd05091         159 DKLNVKISDLGLFREVYAADYYK----LMGNSL----LPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP  226 (283)
T ss_pred             CCCceEecccccccccccchhee----eccCcc----CCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence            99999999999987653322110    000011    11123344333  457889999999999999987 5444

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8.2e-29  Score=206.30  Aligned_cols=234  Identities=14%  Similarity=0.135  Sum_probs=160.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~   89 (260)
                      .|+..+.||+|++|.||+|.+.  ++.+|+|.+.....     ........+.+|++++..++|+||+ ++    +....
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   76 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-----IKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYL   76 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc-----chHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEE
Confidence            4677899999999999999984  79999998654322     1112345688999999999999998 22    21212


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++.... ...+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          77 CLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence            22       45666655332 34688889999999999999999999999999999999999999999999999865533


Q ss_pred             ccccccccccc-----------------ccc--eeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--
Q psy7935         163 TEDKAVDLYVL-----------------KRN--LTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--  219 (260)
Q Consensus       163 ~~~~~~d~~~~-----------------~~~--~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--  219 (260)
                      ...........                 ...  .....+...+.+|+..  ..++.++|+||+|++++++++|..|+.  
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  235 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS  235 (316)
T ss_pred             cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence            21111000000                 000  0001111122233332  446788999999999999999998875  


Q ss_pred             -HHHHHHHHHhhcc---cc--CCccHHHHHHHHHHhccccccc
Q psy7935         220 -FRDMFNWILSSYR---RQ--NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       220 -~~~~~~~~~~~~~---~~--~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+.+..+.....   ..  .++.+.+++++|...++..|..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s  278 (316)
T cd05574         236 NRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLG  278 (316)
T ss_pred             chHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCC
Confidence             2333333333211   11  2456788999998888888876

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0666|consensus

Probab=99.96  E-value=8.2e-30  Score=200.53  Aligned_cols=184  Identities=16%  Similarity=0.220  Sum_probs=135.1

Q ss_pred             ccCcceeeccCCceeEEEEEEc------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      .|+....||+|+||.||+|...      .+++|||.+...+- ...+     .....+|+..++.++|||++     |..
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGi-----S~SAcREiaL~REl~h~nvi~Lv~Vfl~   98 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGI-----SMSACREIALLRELKHPNVISLVKVFLS   98 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCc-----CHHHHHHHHHHHHhcCCcchhHHHHHhc
Confidence            3788999999999999999652      34789997543321 1111     24567899999999999999     333


Q ss_pred             CCchhh--------hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC----CcEEE
Q psy7935          86 VQKSAI--------QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD----HHLVM  151 (260)
Q Consensus        86 ~~~~~~--------~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~----~~~kl  151 (260)
                      . ...+        .+|.+.+...+.  .+.++...+..|+.||+.|+.|||++=|+||||||+|||+..+    |.|||
T Consensus        99 ~-d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKI  177 (438)
T KOG0666|consen   99 H-DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKI  177 (438)
T ss_pred             c-CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEe
Confidence            2 3333        444444433222  5679999999999999999999999999999999999999987    99999


Q ss_pred             Eeecccccccccccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccc
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      +|||+++.+..+-..-   ++.     ..+....++ +|+-+   ..+++++|+|+.||++.|++|-.
T Consensus       178 aDlGlaR~~~~plkpl---~s~-----d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~  237 (438)
T KOG0666|consen  178 ADLGLARLFNNPLKPL---ASL-----DPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLE  237 (438)
T ss_pred             ecccHHHHhhcccccc---ccC-----CceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccC
Confidence            9999999887664221   111     122223333 33333   56999999999999999988754

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.3e-29  Score=207.72  Aligned_cols=185  Identities=18%  Similarity=0.209  Sum_probs=128.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEcC----------------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYLG----------------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR   77 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~   77 (260)
                      +.+.|++.+.||+|+||.||+|++.+                ..||+|.+....       .......+.+|++++++++
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~ei~~l~~l~   75 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-------TKTARNDFLKEIKIMSRLK   75 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-------CHHHHHHHHHHHHHHHhCC
Confidence            45678889999999999999998632                248888753221       1112456899999999999


Q ss_pred             CCCeE-Ee----CCCchhh-------hhHHHhhccCcc---------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          78 MADIC-LD----DVQKSAI-------QTLISNLDSQNI---------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        78 h~~i~-~~----~~~~~~~-------~~l~~~l~~~~~---------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      |+|++ ++    .....++       ++|.+++.....         ...+++..++.++.|++.||+|||+++++|+||
T Consensus        76 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dl  155 (295)
T cd05097          76 NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDL  155 (295)
T ss_pred             CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecccc
Confidence            99998 22    2222222       344444432210         123677888899999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      ||+||+++.++.+||+|||++..........    ..+...    ....+.+|+..  ..++.++|+||||++++++.+
T Consensus       156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~----~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~  226 (295)
T cd05097         156 ATRNCLVGNHYTIKIADFGMSRNLYSGDYYR----IQGRAV----LPIRWMAWESILLGKFTTASDVWAFGVTLWEMFT  226 (295)
T ss_pred             ChhhEEEcCCCcEEecccccccccccCccee----ccCcCc----CceeecChhhhccCCcCchhhHHHHHHHHHHHHH
Confidence            9999999999999999999987543321110    000000    11112233322  557889999999999999976

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-28  Score=198.27  Aligned_cols=229  Identities=15%  Similarity=0.179  Sum_probs=152.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .|++.+.||+|++|.||.|.+  +++++++|.+......   .........+.+|++++++++||||+ +++.  ....+
T Consensus         3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   79 (263)
T cd06625           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDS---PETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETL   79 (263)
T ss_pred             cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccc---hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeE
Confidence            367789999999999999987  4899999986433211   11122235688999999999999999 3221  11122


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++++.+..+      ...+++.....++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus        80 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~  159 (263)
T cd06625          80 SIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS  159 (263)
T ss_pred             EEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence            333444433222      22477888889999999999999999999999999999999999999999999865432211


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHH---HHHHHHHhh-----cccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR---DMFNWILSS-----YRRQ  234 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~  234 (260)
                      .....        ....+...| +|+..  ..++.++|+||+|++++++++|..|+...   ....+....     .+..
T Consensus       160 ~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  231 (263)
T cd06625         160 SGTGM--------KSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSH  231 (263)
T ss_pred             ccccc--------cCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCcc
Confidence            11000        000111122 22222  34778999999999999999998886521   111111111     1222


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..+.+++++|...++..|..
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rpt  253 (263)
T cd06625         232 VSPDARNFLRRTFVENAKKRPS  253 (263)
T ss_pred             CCHHHHHHHHHHhhcCcccCCC
Confidence            3456678888888888777753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=6.8e-29  Score=200.48  Aligned_cols=216  Identities=18%  Similarity=0.246  Sum_probs=150.8

Q ss_pred             cccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCchhh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKSAI   91 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~~~   91 (260)
                      +.|++.+.||+|+||.||++...++.+++|.+...     .     ....+.+|+.++++++|||++ +.+   ....++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~-----~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   75 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD-----V-----TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYI   75 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCc-----c-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEE
Confidence            45788899999999999999999999999985321     1     135688999999999999999 222   222222


Q ss_pred             -------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          92 -------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 -------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                             ++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        76 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~  154 (254)
T cd05083          76 VMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV  154 (254)
T ss_pred             EEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence                   45555554332 2347888888999999999999999999999999999999999999999999986543221


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhccc----c
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYRR----Q  234 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~----~  234 (260)
                      ...         .....    +.+|+..  ..++.+.|+||+|++++++++ |..|+.   ..+..+....+...    .
T Consensus       155 ~~~---------~~~~~----y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T cd05083         155 DNS---------KLPVK----WTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEG  221 (254)
T ss_pred             CCC---------CCCce----ecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCc
Confidence            110         00111    1222222  457788999999999999987 766654   33444443333221    1


Q ss_pred             CCccHHHHHHHHHHhcccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .++.+.+++.+|...++..|.
T Consensus       222 ~~~~~~~li~~~l~~~p~~Rp  242 (254)
T cd05083         222 CPADVYVLMTSCWETEPKKRP  242 (254)
T ss_pred             CCHHHHHHHHHHcCCChhhCc
Confidence            134456677777766666664

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=1e-28  Score=199.77  Aligned_cols=219  Identities=15%  Similarity=0.195  Sum_probs=151.4

Q ss_pred             ccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh-
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI-   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~-   91 (260)
                      .|++.+.||+|+||.||.|.+. +..+|+|.+.....         ....+.+|+.++++++||||+ +++.  ..... 
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   75 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIY   75 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcE
Confidence            4677899999999999999985 45699997543221         124588999999999999999 3221  11122 


Q ss_pred             --------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          92 --------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 --------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                              ++|.+++...  ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.+||+|||.++.....
T Consensus        76 lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          76 IVTEYMSNGCLLNYLREH--GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             EEEEcCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence                    4455555432  225788999999999999999999999999999999999999999999999998755332


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhccc---
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYRR---  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~---  233 (260)
                      ......        . . .+...| +|+..  ..++.++|+||||++++++.+ |..|+.   ..+....+..+.+.   
T Consensus       154 ~~~~~~--------~-~-~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd05113         154 EYTSSV--------G-S-KFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP  223 (256)
T ss_pred             ceeecC--------C-C-ccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC
Confidence            211000        0 0 011112 23222  457889999999999999998 777654   33444555443322   


Q ss_pred             -cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+..+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~li~~cl~~~p~~Rp~  247 (256)
T cd05113         224 HLASEKVYAIMYSCWHEKAEERPT  247 (256)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCCC
Confidence             22345667777777667666643

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.96  E-value=8e-29  Score=203.94  Aligned_cols=216  Identities=15%  Similarity=0.180  Sum_probs=145.2

Q ss_pred             cCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      |++.+.||+|+||.||+|+..       ...+++|.+....       .......+.+|+.+++.++||||+ +.+    
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   74 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-------SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ   74 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-------CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec
Confidence            567899999999999999873       2468888643211       111235688999999999999999 332    


Q ss_pred             CCchhh-------hhHHHhhccCcc---------------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          86 VQKSAI-------QTLISNLDSQNI---------------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                      ....++       ++|.+++.....                     ...+++..++.++.|++.||+|||+++++|||||
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            111111       556666543210                     1347788899999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-c
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-E  214 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~  214 (260)
                      |+|||++.++.+||+|||++.............    .    ......+.+|+..  ..++.++|+||||++++++++ |
T Consensus       155 p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~----~----~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g  226 (290)
T cd05045         155 ARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRS----K----GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG  226 (290)
T ss_pred             hheEEEcCCCcEEeccccccccccCccchhccc----C----CCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcC
Confidence            999999999999999999986543222110000    0    0001112233322  447788999999999999998 6


Q ss_pred             ccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         215 DKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       215 ~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      ..|+.                          ..+++..|+...|.. |+++.++++.|+++
T Consensus       227 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~-Rp~~~~i~~~l~~~  286 (290)
T cd05045         227 GNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDK-RPTFADISKELEKM  286 (290)
T ss_pred             CCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCccc-CCCHHHHHHHHHHH
Confidence            54432                          345556666644443 56666666666654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0983|consensus

Probab=99.96  E-value=2.8e-28  Score=188.88  Aligned_cols=228  Identities=17%  Similarity=0.207  Sum_probs=163.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC---
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD---   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~---   85 (260)
                      +.-+.++.++.||+|+-|.|++++.+  |.-.|||......       ....-++++..+.+..+. ..|.|+ +++   
T Consensus        89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-------Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi  161 (391)
T KOG0983|consen   89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-------NKEENKRILMDLDVVLKSHDCPYIVQCFGYFI  161 (391)
T ss_pred             cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-------CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe
Confidence            34455788999999999999999984  7999999843211       111235677777766555 489999 333   


Q ss_pred             -CCchhh-----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 -VQKSAI-----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 -~~~~~~-----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       .....+     ....|.+-... ...+++..+-++...++.||.||.++ +|+|||+||+|||+|..|.+|+||||++.
T Consensus       162 ~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsG  240 (391)
T KOG0983|consen  162 TNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISG  240 (391)
T ss_pred             eCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccc
Confidence             333333     22222222221 34589999999999999999999964 99999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecC-ccccccccccceeEeecceeeeecccccccc----HHHHHHHHHhhccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWS-KGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYRR  233 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  233 (260)
                      ...++....       ...++..+++|+.- ++....|+-++|+||||+.++|+.||..|..    -.+++..++...+.
T Consensus       241 rlvdSkAht-------rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP  313 (391)
T KOG0983|consen  241 RLVDSKAHT-------RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP  313 (391)
T ss_pred             eeecccccc-------cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC
Confidence            776654321       23344555555543 3345778999999999999999999999877    34555566554432


Q ss_pred             ------cCCccHHHHHHHHHHhcccccc
Q psy7935         234 ------QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ------~~~~~~~~il~~l~~~~~~~r~  255 (260)
                            ..++++.++++.|...+.+.|.
T Consensus       314 ~L~~~~gFSp~F~~fv~~CL~kd~r~RP  341 (391)
T KOG0983|consen  314 LLPGHMGFSPDFQSFVKDCLTKDHRKRP  341 (391)
T ss_pred             CCCcccCcCHHHHHHHHHHhhcCcccCc
Confidence                  1357788999998877776664

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=5.7e-29  Score=203.97  Aligned_cols=226  Identities=19%  Similarity=0.195  Sum_probs=154.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .++|++.+.||+|+||.||+|.+.  +..+++|.+....        ....+.+.+|+++++.++|+|++ +    ....
T Consensus         4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~   75 (282)
T cd06643           4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--------EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN   75 (282)
T ss_pred             HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--------HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC
Confidence            456788999999999999999984  6788888753221        11235688899999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       +++.+++...  ...+++..+..++.|++.||+|||+.|++||||||+|||++.++.++|+|||++...
T Consensus        76 ~~~~v~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          76 NLWILIEFCAGGAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             EEEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccc
Confidence            2222       3343433321  235788899999999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCc---cccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSK---GTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---  231 (260)
                      ........      ....+..+.+|+...   .....++.++|+||+|++++++.++..|+.   ..+.........   
T Consensus       154 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~  227 (282)
T cd06643         154 TRTIQRRD------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT  227 (282)
T ss_pred             cccccccc------cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC
Confidence            33211100      011112222222210   012346778999999999999999988865   223333332221   


Q ss_pred             ---cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         +...+..+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~  255 (282)
T cd06643         228 LAQPSRWSSEFKDFLKKCLEKNVDARWT  255 (282)
T ss_pred             CCCccccCHHHHHHHHHHccCChhhCcC
Confidence               1123456889999998888888864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=5.3e-29  Score=206.33  Aligned_cols=219  Identities=15%  Similarity=0.226  Sum_probs=151.1

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      +.|+..+.||+|+||.||+|.+  .|.    .+|+|.+....  .     ......+.+|+.+++++.||||+ +++.  
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~-----~~~~~~~~~e~~~~~~l~h~niv~~~~~~~   79 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--G-----PKANVEFMDEALIMASMDHPHLVRLLGVCL   79 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--C-----HHHHHHHHHHHHHHHhCCCCCcccEEEEEc
Confidence            4577789999999999999987  344    46778643211  1     11234688899999999999999 3321  


Q ss_pred             -Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 -QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 -~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       ....+       ++|.+++...  ...+++..+..++.|++.||+|||+++|+|+||||+||+++.++.+||+|||++.
T Consensus        80 ~~~~~~v~e~~~~g~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~  157 (303)
T cd05110          80 SPTIQLVTQLMPHGCLLDYVHEH--KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLAR  157 (303)
T ss_pred             CCCceeeehhcCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccc
Confidence             11111       5555555432  2246788889999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      .........    ......    ....+.+|+..  ..++.++|+||||++++++++ +..|+.                
T Consensus       158 ~~~~~~~~~----~~~~~~----~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~  229 (303)
T cd05110         158 LLEGDEKEY----NADGGK----MPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER  229 (303)
T ss_pred             cccCccccc----ccCCCc----cccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC
Confidence            654322110    000000    01112233322  457788999999999999886 555532                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                                ..+++.+|+...+.. |+++.++++.+.++...
T Consensus       230 ~~~~~~~~~~~~~li~~c~~~~p~~-Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         230 LPQPPICTIDVYMVMVKCWMIDADS-RPKFKELAAEFSRMARD  271 (303)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHHhc
Confidence                      245567777755554 78889998888876433

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.96  E-value=5e-29  Score=202.60  Aligned_cols=188  Identities=15%  Similarity=0.194  Sum_probs=133.8

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .|++.+.||+|++|.||+|.+  ++++++||.+.....     ........+.+|+.+++.+.|+|++ +    .+....
T Consensus         3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   77 (267)
T cd08229           3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-----MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL   77 (267)
T ss_pred             hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-----hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeE
Confidence            466789999999999999997  588999997543221     1222346788999999999999998 2    222211


Q ss_pred             hh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .+       ++|.+++..... ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus        78 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          78 NIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence            11       345555432111 2357888899999999999999999999999999999999999999999999886553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...... .         ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       158 ~~~~~~-~---------~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~  207 (267)
T cd08229         158 SKTTAA-H---------SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY  207 (267)
T ss_pred             cCCccc-c---------cccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence            321100 0         00011112233322  457788999999999999999987753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=4.9e-29  Score=202.70  Aligned_cols=226  Identities=16%  Similarity=0.151  Sum_probs=151.8

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----C
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----D   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~   85 (260)
                      .+.+.|++.+.||+|+||.||+|++  +++.||+|++..+...        ....+.+|+.++++++|||++ +.    .
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--------~~~~~~~e~~~l~~~~h~~ii~~~~~~~~   77 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD--------DFSLIQQEIFMVKECKHCNIVAYFGSYLS   77 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc--------hHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Confidence            3456689999999999999999997  4789999986433211        124577899999999999999 22    2


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||+|||+++|+||||+|+||+++.++.++|+|||++.
T Consensus        78 ~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~  154 (267)
T cd06646          78 REKLWICMEYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAA  154 (267)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccce
Confidence            222222       4555555432   257888889999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCc-cccccccccceeEeecceeeeeccccccccHHHHHHHHH---h-hcc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSK-GTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWIL---S-SYR-  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~-~~~-  232 (260)
                      ..........      ....+..+.+|+... .....++.++|+||+|+++++++++..|+..........   . ... 
T Consensus       155 ~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  228 (267)
T cd06646         155 KITATIAKRK------SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQP  228 (267)
T ss_pred             eecccccccC------ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCC
Confidence            6543211100      001111122222111 112336678999999999999999987764111111100   0 000 


Q ss_pred             ------ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ------RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ------~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                            ...+..+.+++++|...++..|.
T Consensus       229 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  257 (267)
T cd06646         229 PKLKDKTKWSSTFHNFVKISLTKNPKKRP  257 (267)
T ss_pred             CCCccccccCHHHHHHHHHHhhCChhhCc
Confidence                  11234567788888777777775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=3.9e-29  Score=206.47  Aligned_cols=223  Identities=17%  Similarity=0.251  Sum_probs=150.0

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      ..|++.+.||+|++|.||+|.+  +++.+++|.+......        ..+.+.+|+.+++.+.|+|++ +.+.  ....
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--------~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~   91 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVGDE   91 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence            4688899999999999999997  4889999986433211        135688899999999999999 2221  1112


Q ss_pred             hhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          91 IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        91 ~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      .+.+++|+.+..+     ...+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++........
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             EEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            2234444443322     22477888899999999999999999999999999999999999999999999875433221


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHH----HHHHHHHhhc-----ccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR----DMFNWILSSY-----RRQ  234 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~  234 (260)
                      ....          ..+...+.+|+..  ...++++|+||||++++++++|..|+...    ........+.     +..
T Consensus       172 ~~~~----------~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (296)
T cd06654         172 KRST----------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK  241 (296)
T ss_pred             ccCc----------ccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccc
Confidence            1100          0011112233322  44678999999999999999999886521    1111111111     111


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .++.+.+++.+|...++..|.+
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt  263 (296)
T cd06654         242 LSAIFRDFLNRCLDMDVEKRGS  263 (296)
T ss_pred             cCHHHHHHHHHHCcCCcccCcC
Confidence            2344566677776666666643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.6e-29  Score=204.28  Aligned_cols=229  Identities=20%  Similarity=0.232  Sum_probs=156.9

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      +.+.|++.+.||.|+||.||+|.+.  +..+++|++....        ....+.+.+|++++++++|+|++ +.+.  ..
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--------EEELEDFMVEIDILSECKHPNIVGLYEAYFYE   74 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--------HHHHHHHHHHHHHHHhCCCCceeEEEEEEecC
Confidence            4456889999999999999999984  7899999864221        11235688999999999999999 3221  12


Q ss_pred             hhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...+.+++|+.+..+       ...+++..++.++.|++.||+|||+++|+|+||+|+||+++.++.++|+|||++....
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~  154 (280)
T cd06611          75 NKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK  154 (280)
T ss_pred             CeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhc
Confidence            222334444433222       2358889999999999999999999999999999999999999999999999876543


Q ss_pred             ccccccccccccccceeeeeeeeeecCc-c--ccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSK-G--TLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      .......      ....+..+.+|+... +  ....++.++|+||+|++++++++|..|+.   ..+.+..+....+   
T Consensus       155 ~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  228 (280)
T cd06611         155 STLQKRD------TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL  228 (280)
T ss_pred             ccccccc------eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc
Confidence            3211110      001111122222111 0  11346778999999999999999988866   2233333333221   


Q ss_pred             ---ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         ...+..+.+++.+|...++..|..
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rps  255 (280)
T cd06611         229 DQPSKWSSSFNDFLKSCLVKDPDDRPT  255 (280)
T ss_pred             CCcccCCHHHHHHHHHHhccChhhCcC
Confidence               122456788888888888888853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=3.7e-29  Score=202.33  Aligned_cols=220  Identities=19%  Similarity=0.277  Sum_probs=153.3

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |++.+.||+|+||.||+++..  ++.+|+|++....     ... .......+|+.++++++||||+     +.+....+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~-----~~~-~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE-----IEE-EEREENIREIKILRRLRHPNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT-----HHH-HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc-----ccc-cccchhhhhhhcccccccccccccccccccccccc
Confidence            456899999999999999995  6689999865432     111 1122345599999999999999     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++..   ...++...++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||.+......
T Consensus        75 ~v~~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~  151 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN  151 (260)
T ss_dssp             EEEEEETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTST
T ss_pred             ccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            2       477777762   235899999999999999999999999999999999999999999999999998753111


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccH------HHHHHHHHh-hccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDF------RDMFNWILS-SYRR  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~  233 (260)
                      ....          ........+.+|+..   ...+.++|+||+|+++++++++..|+..      ...+.+... ....
T Consensus       152 ~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  221 (260)
T PF00069_consen  152 NENF----------NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS  221 (260)
T ss_dssp             TSEB----------SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred             cccc----------ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence            1000          000011112233332   4688999999999999999999887652      222222221 1111


Q ss_pred             c------CCccHHHHHHHHHHhccccccc
Q psy7935         234 Q------NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~------~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .      .++.+.+++.+|...++..|..
T Consensus       222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~  250 (260)
T PF00069_consen  222 SSQQSREKSEELRDLIKKMLSKDPEQRPS  250 (260)
T ss_dssp             HTTSHTTSHHHHHHHHHHHSSSSGGGSTT
T ss_pred             cccccchhHHHHHHHHHHHccCChhHCcC
Confidence            1      1267788888888888888864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.96  E-value=8.3e-29  Score=201.92  Aligned_cols=185  Identities=19%  Similarity=0.219  Sum_probs=129.1

Q ss_pred             cCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~   87 (260)
                      |.+.+.||+|+||.||+|.+.     +..||||++..+...      ....+.+.+|+.++++++|||++ +++.    .
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   74 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS------SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSR   74 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC------hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence            345788999999999999862     678999986433221      11245688999999999999998 3331    1


Q ss_pred             -ch-----hh-------hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          88 -KS-----AI-------QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        88 -~~-----~~-------~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                       ..     .+       +++.+++.....   ...++...+..++.|++.||+|||+++|+||||||+||+++.++.+||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl  154 (273)
T cd05074          75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCV  154 (273)
T ss_pred             CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEE
Confidence             10     00       455555432111   124678888999999999999999999999999999999999999999


Q ss_pred             Eeecccccccccccccccccccccceeeeeeee-eecCcccc--ccccccceeEeecceeeeecc-cccc
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVA-YCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKA  217 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~  217 (260)
                      +|||++.............         ..... .+++|+..  ...+.++|+||+|++++++++ +..|
T Consensus       155 ~dfg~~~~~~~~~~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p  215 (273)
T cd05074         155 ADFGLSKKIYSGDYYRQGC---------ASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTP  215 (273)
T ss_pred             CcccccccccCCcceecCC---------CccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCC
Confidence            9999987653322111000         00111 12333333  446788999999999999988 5444

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0596|consensus

Probab=99.96  E-value=1.8e-29  Score=211.63  Aligned_cols=231  Identities=14%  Similarity=0.138  Sum_probs=159.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~--~~~   89 (260)
                      +.-|+++++||.|+.+.||++... .+.+|+|.+......      ......|.+|++.|.+++ |.+|+ ++|.  .+.
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D------~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~  433 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEAD------NQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG  433 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcC------HHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc
Confidence            445899999999999999999975 567777765443322      223567999999999995 88999 5554  455


Q ss_pred             hhhhHHHhh--------ccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AIQTLISNL--------DSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~~~l~~~l--------~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      +++.+||+-        ..+  ...++...+..+..||+.|+.++|.+||||.||||+|+|+- .|.+||+|||+|....
T Consensus       434 ~lYmvmE~Gd~DL~kiL~k~--~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  434 YLYMVMECGDIDLNKILKKK--KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ  510 (677)
T ss_pred             eEEEEeecccccHHHHHHhc--cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence            666666553        322  22344457888999999999999999999999999999998 5899999999998765


Q ss_pred             cccc-------ccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc-HHHHHHHHHhh---
Q psy7935         162 STED-------KAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD-FRDMFNWILSS---  230 (260)
Q Consensus       162 ~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~~---  230 (260)
                      ....       .++--|+.++.+..+-+.  .-.....-.+..++||||+||++|+|+-|+-|+. ....+.++..-   
T Consensus       511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~--~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P  588 (677)
T KOG0596|consen  511 PDTTSIVKDSQVGTVNYMSPEALTDMSSS--RENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDP  588 (677)
T ss_pred             ccccceeeccccCcccccCHHHHhhcccc--ccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCC
Confidence            4321       112223333332222111  0011112347889999999999999999988877 44455554432   


Q ss_pred             -----ccccCCcc-HHHHHHHHHHhccccccc
Q psy7935         231 -----YRRQNRKQ-FETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -----~~~~~~~~-~~~il~~l~~~~~~~r~~  256 (260)
                           ++....+. +-++++.|..-+++.|..
T Consensus       589 ~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~s  620 (677)
T KOG0596|consen  589 NHEIEFPDIPENDELIDVMKCCLARDPKKRWS  620 (677)
T ss_pred             CccccccCCCCchHHHHHHHHHHhcCcccCCC
Confidence                 12111222 678888888888888864

>KOG0574|consensus

Probab=99.96  E-value=3.5e-31  Score=207.68  Aligned_cols=187  Identities=17%  Similarity=0.256  Sum_probs=149.2

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      +..+.+.|+++++||+|+||.||++.+  +|+.+|||.+....          ..+.+.+|+.+++++..|+++ +++. 
T Consensus        28 ~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----------DLQEIIKEISIMQQC~S~yVVKYYGSY   97 (502)
T KOG0574|consen   28 NKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----------DLQEIIKEISIMQQCKSKYVVKYYGSY   97 (502)
T ss_pred             cCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----------hHHHHHHHHHHHHHcCCchhhhhhhhh
Confidence            344556699999999999999999987  49999999864432          246789999999999999999 5543 


Q ss_pred             -CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 -QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 -~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       .+.-++.+++|+..+..       .+.+++.++..++.+.+.||+|||...-+|||||..|||++.+|++||+|||.+.
T Consensus        98 FK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAG  177 (502)
T KOG0574|consen   98 FKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAG  177 (502)
T ss_pred             ccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccc
Confidence             23334557777765443       5679999999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      ..++...++.          +.+++.++++|++.  -.|..++||||+|+..+||..|+-|
T Consensus       178 QLTDTMAKRN----------TVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PP  228 (502)
T KOG0574|consen  178 QLTDTMAKRN----------TVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPP  228 (502)
T ss_pred             hhhhhHHhhC----------ccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCC
Confidence            8776544432          23344444455555  4578899999999999999988754

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=9.4e-29  Score=204.15  Aligned_cols=190  Identities=18%  Similarity=0.195  Sum_probs=130.7

Q ss_pred             cccccCcceeeccCCceeEEEEEEc------------------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL------------------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK   75 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~------------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~   75 (260)
                      +.+.|++.+.||+|+||.||++.+.                  +..+|+|.+....       .......+.+|+.+++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~E~~~l~~   75 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-------NKNARNDFLKEIKIMSR   75 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHh
Confidence            4556888999999999999998642                  2358888743221       11124578899999999


Q ss_pred             cCCCCeE-Ee----CCCchhh-------hhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy7935          76 CRMADIC-LD----DVQKSAI-------QTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGD  135 (260)
Q Consensus        76 ~~h~~i~-~~----~~~~~~~-------~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~d  135 (260)
                      ++|+|++ ++    +....++       ++|.+++.....        ...+++..+..++.|++.||+|||++|++|+|
T Consensus        76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d  155 (296)
T cd05095          76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD  155 (296)
T ss_pred             CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence            9999998 22    2222222       456666544221        12366778999999999999999999999999


Q ss_pred             CCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCccc--cccccccceeEeecceeeeecc
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT--LQSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~di~s~g~~~~~~~~  213 (260)
                      |||+|||++.++.++|+|||++..........    ..+......    .+.+++.  ...++.++|+||+|++++++++
T Consensus       156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~----~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~  227 (296)
T cd05095         156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYYR----IQGRAVLPI----RWMSWESILLGKFTTASDVWAFGVTLWEILT  227 (296)
T ss_pred             CChheEEEcCCCCEEeccCcccccccCCccee----ccCcCcCcc----ccCCHHHHhcCCccchhhhhHHHHHHHHHHH
Confidence            99999999999999999999987553321100    000000001    1122221  1557889999999999999987


Q ss_pred             --ccccc
Q psy7935         214 --EDKAV  218 (260)
Q Consensus       214 --~~~~~  218 (260)
                        +..|+
T Consensus       228 ~~~~~p~  234 (296)
T cd05095         228 LCKEQPY  234 (296)
T ss_pred             hCCCCCc
Confidence              44444

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=6.6e-29  Score=203.13  Aligned_cols=227  Identities=13%  Similarity=0.108  Sum_probs=149.0

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      ..+.|++.+.||+|++|.||+|.+.       +..|++|......       .......+.+|+.+++.++|+||+ +++
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~   76 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-------SEQDESDFLMEALIMSKFNHQNIVRLIG   76 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            3456888999999999999999984       3578888643211       111235688999999999999999 222


Q ss_pred             ----CCchhh-------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---  147 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---  147 (260)
                          ....++       ++|.+++.....    ...+++..+..++.|++.||+|||+++++||||||+||+++.++   
T Consensus        77 ~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~  156 (277)
T cd05036          77 VSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGR  156 (277)
T ss_pred             EEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCc
Confidence                222222       556666644321    12478899999999999999999999999999999999998754   


Q ss_pred             cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HH
Q psy7935         148 HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FR  221 (260)
Q Consensus       148 ~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~  221 (260)
                      .+||+|||+++.........    ..+...    ....+++|+..  ..++.++|+||+|++++++++ |..|++   ..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~----~~~~~~----~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~  228 (277)
T cd05036         157 VAKIADFGMARDIYRASYYR----KGGRAM----LPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ  228 (277)
T ss_pred             ceEeccCccccccCCcccee----cCCCCC----ccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            69999999987653221100    000000    01123334433  558899999999999999886 766654   22


Q ss_pred             HHHHHHHhh----ccccCCccHHHHHHHHHHhcccccc
Q psy7935         222 DMFNWILSS----YRRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       222 ~~~~~~~~~----~~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ++.+.+...    .+...++.+.+++.+|...++..|.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp  266 (277)
T cd05036         229 EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRP  266 (277)
T ss_pred             HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCc
Confidence            333332221    1122234556666666666666663

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=1.1e-28  Score=200.52  Aligned_cols=232  Identities=13%  Similarity=0.128  Sum_probs=154.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCc-hhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHP-KLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~-~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      +.+.+.||+|++|.||+|.+  .++.+++|.+........ ........+.+.+|+.++++++||||+ +.+    ....
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            45578999999999999997  478999998654332211 111122235788999999999999999 222    2221


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence            11       3455555432   3578888889999999999999999999999999999999999999999999876643


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH---HHHHHHHHhh----ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSS----YRR  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~  233 (260)
                      ...........+    .+.+...+.+|+..  ..++.++|+||+|++++++++|..|+..   ...+......    .+.
T Consensus       159 ~~~~~~~~~~~~----~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06628         159 NSLSTKTNGARP----SLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPS  234 (267)
T ss_pred             ccccCCcccccc----ccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCc
Confidence            211100000000    01111112233322  3467789999999999999999888762   1222222221    122


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++++|...++..|..
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~  257 (267)
T cd06628         235 NISSEAIDFLEKTFEIDHNKRPT  257 (267)
T ss_pred             ccCHHHHHHHHHHccCCchhCcC
Confidence            33456688888888878777753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=6.8e-29  Score=201.16  Aligned_cols=225  Identities=16%  Similarity=0.192  Sum_probs=154.3

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      +++...|+..+.||.|+||.||+|.+. +..+++|.+.....        .....+.+|+.+++.++|+|++ +++    
T Consensus         2 ~~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   73 (261)
T cd05148           2 ERPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL--------LKQQDFQKEVQALKRLRHKHLISLFAVCSV   73 (261)
T ss_pred             cCcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch--------hhHHHHHHHHHHHhcCCCcchhheeeeEec
Confidence            355667888999999999999999985 78899998543211        1134688899999999999999 322    


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++.... ...++...+..++.|++.||+|||++|++|+||+|+||+++.++.+||+|||.+.
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~  152 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLAR  152 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchh
Confidence            111112       46666665433 3457888999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~  232 (260)
                      ..........      ......    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+.+..+..+..
T Consensus       153 ~~~~~~~~~~------~~~~~~----~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~  222 (261)
T cd05148         153 LIKEDVYLSS------DKKIPY----KWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR  222 (261)
T ss_pred             hcCCcccccc------CCCCce----EecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc
Confidence            6533211100      000001    11222222  457788999999999999998 666654   3344444443321


Q ss_pred             ----ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ----RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                          ...++.+.+++.+|...++..|.
T Consensus       223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp  249 (261)
T cd05148         223 MPCPAKCPQEIYKIMLECWAAEPEDRP  249 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCchhCc
Confidence                12234556666666666665553

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0604|consensus

Probab=99.96  E-value=1.8e-29  Score=197.66  Aligned_cols=211  Identities=16%  Similarity=0.223  Sum_probs=163.1

Q ss_pred             ceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhc-ccCCCCeE-EeCCCchhh-----
Q psy7935          21 AECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLM-KCRMADIC-LDDVQKSAI-----   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~-~~~h~~i~-~~~~~~~~~-----   91 (260)
                      .+.||-|-.|.|..|.+  +|+.+|+|++.-             .....+|++..- .-.||||+ ..+...+..     
T Consensus        67 ~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   67 WQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             hhhhccccCCceEEEEeccchhhhHHHHHhc-------------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            57899999999999998  499999997421             234667887544 44799999 444333322     


Q ss_pred             ----------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeecccc
Q psy7935          92 ----------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQ  158 (260)
Q Consensus        92 ----------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~  158 (260)
                                |.|+..++.+. +..+++.++..|++||+.|++|||+.+|.||||||+|+|...   +..+||+|||+|+
T Consensus       134 LLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK  212 (400)
T ss_pred             eEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence                      77887777665 667999999999999999999999999999999999999987   7889999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------HHHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~~  229 (260)
                      .-..+.           .+.++.++.++.+|+++  ..++...|+||+|+++|-+++|--|+.       ...+-.++..
T Consensus       213 ~t~~~~-----------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~  281 (400)
T KOG0604|consen  213 ETQEPG-----------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT  281 (400)
T ss_pred             ccCCCc-----------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc
Confidence            655432           23456666667777766  458889999999999999999987766       3466677777


Q ss_pred             hccccCCccH-------HHHHHHHHHhccccccc
Q psy7935         230 SYRRQNRKQF-------ETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~~~~~~~~-------~~il~~l~~~~~~~r~~  256 (260)
                      +...+..+.|       .+++..|...++..|.+
T Consensus       282 gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT  315 (400)
T KOG0604|consen  282 GQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT  315 (400)
T ss_pred             cCccCCChhHhHHHHHHHHHHHHHhcCCchhhee
Confidence            7666655555       55666667777777754

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2e-29  Score=221.82  Aligned_cols=193  Identities=16%  Similarity=0.183  Sum_probs=127.3

Q ss_pred             cccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCc---------hhhHHHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHP---------KLDEALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~---------~~~~~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      +.|++++.||+|+||.||+|..+   +...+.|.+........         ..........+.+|+.++++++|+||+ 
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            45899999999999999998763   22222221100000000         000111245688999999999999999 


Q ss_pred             EeC----CCchhh------hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          83 LDD----VQKSAI------QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        83 ~~~----~~~~~~------~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                      +++    ....++      +.+++++....+  ......+.+..++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus       228 l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vk  307 (501)
T PHA03210        228 IEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIV  307 (501)
T ss_pred             EeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence            322    222221      556666654332  12234566778999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      |+|||++...........         ....+...+.+|+..  ..++.++|+||+|+++++++++..+
T Consensus       308 L~DFGla~~~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~  367 (501)
T PHA03210        308 LGDFGTAMPFEKEREAFD---------YGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC  367 (501)
T ss_pred             EEeCCCceecCccccccc---------ccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            999999976643321110         011122222333333  4578899999999999999987643

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=2.5e-28  Score=202.51  Aligned_cols=233  Identities=14%  Similarity=0.131  Sum_probs=159.6

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|+..+.||+|+||.||++.+.  ++.|++|.+....     .........+.+|+++++.++||||+ +++    ....
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   76 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN-----LILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHL   76 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh-----hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEE
Confidence            4777899999999999999984  7899999854322     11122245688999999999999999 322    2211


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||+++....
T Consensus        77 ~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          77 CMVMEYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            22       4555555443   3578888889999999999999999999999999999999999999999999864321


Q ss_pred             ccccccc---cc-ccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-
Q psy7935         163 TEDKAVD---LY-VLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-  231 (260)
Q Consensus       163 ~~~~~~d---~~-~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-  231 (260)
                      ......-   .. ...........+.. +.+|+..  ..++.++|+||||++++++++|..|+.   ..++......+. 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~  233 (305)
T cd05609         154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI  233 (305)
T ss_pred             CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc
Confidence            1110000   00 00000000011122 2233322  457889999999999999999988865   455555554432 


Q ss_pred             --cc---cCCccHHHHHHHHHHhcccccccc
Q psy7935         232 --RR---QNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       232 --~~---~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                        +.   ..++.+.+++++|...++..|..+
T Consensus       234 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  264 (305)
T cd05609         234 EWPEGDEALPADAQDLISRLLRQNPLERLGT  264 (305)
T ss_pred             CCCCccccCCHHHHHHHHHHhccChhhccCc
Confidence              11   124567899999999999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.96  E-value=7.6e-29  Score=203.41  Aligned_cols=186  Identities=20%  Similarity=0.292  Sum_probs=133.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .|+..+.||+|++|.||+|++.  |+.||+|++...... +.     ..+.+.+|+.++++++|+|++ +.+.  .....
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   75 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PV-----IKKIALREIRMLKQLKHPNLVNLIEVFRRKRKL   75 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-cc-----ccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEE
Confidence            4777899999999999999984  889999986433211 11     134578899999999999998 3221  11122


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++|+.+..+      ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        76 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             EEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence            224444433211      23478899999999999999999999999999999999999999999999999976544321


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....          . .+...| +|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~----------~-~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~  202 (286)
T cd07847         156 DYTD----------Y-VATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP  202 (286)
T ss_pred             cccC----------c-ccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence            1100          0 111122 23322   236778999999999999999987764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG1094|consensus

Probab=99.96  E-value=6.5e-29  Score=209.53  Aligned_cols=225  Identities=18%  Similarity=0.204  Sum_probs=160.7

Q ss_pred             eeeccccccccCcceeeccCCceeEEEEEEcC-ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935           8 FKITEASDMVLQPAECFKQGAEGRIFKTEYLG-RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus         8 ~~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      -.+.+.+...+.+.++||+|-||.|.+|...+ ..||||.+......       ..+..|.+|++++.+++||||+ +.+
T Consensus       530 ~al~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~-------~~r~~F~kEIkiLsqLkhPNIveLvG  602 (807)
T KOG1094|consen  530 PALVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK-------NARNDFLKEIKILSRLKHPNIVELLG  602 (807)
T ss_pred             cchhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCcccch-------hHHHHHHHHHHHHhccCCCCeeEEEe
Confidence            35667777888999999999999999999875 89999986543221       1257899999999999999999 322


Q ss_pred             ----CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                          ....++       |+|.+|+...... ....+...+|+.||+.|++||.+.+++||||-|+|+|++.++++||+||
T Consensus       603 VC~~DePicmI~EYmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadf  681 (807)
T KOG1094|consen  603 VCVQDDPLCMITEYMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADF  681 (807)
T ss_pred             eeecCCchHHHHHHHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCc
Confidence                333333       6666666555322 2455666779999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCccc--cccccccceeEeecceeeeecc--cccc-------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT--LQSYNHHLVMIDFGLSQIKVST--EDKA-------------  217 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~di~s~g~~~~~~~~--~~~~-------------  217 (260)
                      |+++..-+.....    ..|+....+.    +++.+.  ++.++.++|+|+||+++||+.+  ...|             
T Consensus       682 gmsR~lysg~yy~----vqgr~vlpiR----wmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~  753 (807)
T KOG1094|consen  682 GMSRNLYSGDYYR----VQGRAVLPIR----WMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA  753 (807)
T ss_pred             ccccccccCCcee----eecceeeeee----ehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence            9997654332111    1122222111    222232  3889999999999999999754  2222             


Q ss_pred             --------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         218 --------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       218 --------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                          ....+++-+|+. .....||+++++..-|++.
T Consensus       754 ~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~-~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  754 GEFFRDQGRQVVLSRPPACPQGLYELMLRCWR-RESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhhcCCCCcceeccCCCcCcHHHHHHHHHHhc-hhhhcCCCHHHHHHHHHHh
Confidence                                224466666666 3344578888877766643

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.96  E-value=6.1e-29  Score=205.90  Aligned_cols=190  Identities=16%  Similarity=0.173  Sum_probs=134.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-E
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-L   83 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~   83 (260)
                      ...+.|+..+.||+|+||.||++.+.       +..+|+|.+.....       ....+.+.+|+++++++ +|+||+ +
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~~iv~~  104 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-------SSEREALMSELKIMSHLGNHENIVNL  104 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-------hHHHHHHHHHHHHHHhccCCCCcceE
Confidence            34456888999999999999999851       45788987432211       11245788999999999 799999 2


Q ss_pred             e----CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          84 D----DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        84 ~----~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                      +    .....++       ++|.+++.... ...+++..+..++.|++.||+|||+++++|+||||+|||++.++.++++
T Consensus       105 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~  183 (302)
T cd05055         105 LGACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKIC  183 (302)
T ss_pred             EEEEecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEEC
Confidence            2    2222122       56666665432 2347889999999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      |||++...........    .+.    ......+.+|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       184 dfg~~~~~~~~~~~~~----~~~----~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~  244 (302)
T cd05055         184 DFGLARDIMNDSNYVV----KGN----ARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY  244 (302)
T ss_pred             CCcccccccCCCceee----cCC----CCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCc
Confidence            9999875433211100    000    0011112233322  457789999999999999987 76664

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.96  E-value=9.7e-29  Score=199.97  Aligned_cols=221  Identities=16%  Similarity=0.161  Sum_probs=157.8

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |++.+.||.|+||.||+|++.  ++.+++|++.......     ....+.+.+|++++++++|||++     +.+....+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   76 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-----KGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMY   76 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-----hhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEE
Confidence            677899999999999999984  8999999865433211     11245788999999999999999     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++...   ..+++..+..++.|+++||.|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus        77 lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          77 LVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             EEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            2       4455555433   25788889999999999999999999999999999999999999999999998665433


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-----HHHHHHHHh----hcc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-----RDMFNWILS----SYR  232 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~  232 (260)
                      .....           ..+...+.+|+..  ...+.++|+||+|++++++++|..|+..     ...+.+...    ..+
T Consensus       154 ~~~~~-----------~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  222 (258)
T cd05578         154 TLTTS-----------TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYP  222 (258)
T ss_pred             ccccc-----------cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCc
Confidence            21100           0011112233322  3367899999999999999999988662     222222222    122


Q ss_pred             ccCCccHHHHHHHHHHhcccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ...++.+.+++.+|...++..|...
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~R~~~  247 (258)
T cd05578         223 ATWSTEAIDAINKLLERDPQKRLGD  247 (258)
T ss_pred             ccCcHHHHHHHHHHccCChhHcCCc
Confidence            3345778899999999998888764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=1.7e-28  Score=202.37  Aligned_cols=184  Identities=18%  Similarity=0.194  Sum_probs=129.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEcC------------------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLG------------------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~------------------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      ...|++.+.||+|+||.||+|++.+                  ..||+|.+.....       ....+.+.+|+++++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-------~~~~~~~~~e~~~l~~l   76 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-------DNAREDFLKEVKILSRL   76 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-------HHHHHHHHHHHHHHHhc
Confidence            3457889999999999999998632                  4588887532211       12246788999999999


Q ss_pred             CCCCeE-Ee----CCCchhh-------hhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          77 RMADIC-LD----DVQKSAI-------QTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        77 ~h~~i~-~~----~~~~~~~-------~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      +|||++ ++    +....++       ++|.+++.....        ...+++..++.++.|++.||+|||+++++|+||
T Consensus        77 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dl  156 (296)
T cd05051          77 SDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDL  156 (296)
T ss_pred             CCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence            999998 22    2111111       455555543220        125788999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      ||+||+++.++.++|+|||++............    +...    ....+.+|+..  ..++.++|+||||++++++.+
T Consensus       157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~----~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~  227 (296)
T cd05051         157 ATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ----GRAP----LPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILT  227 (296)
T ss_pred             chhceeecCCCceEEccccceeecccCcceeec----CcCC----CCceecCHHHhhcCCCCccchhhhhHHHHHHHHh
Confidence            999999999999999999998754332211100    0000    11112233322  467889999999999999877

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0986|consensus

Probab=99.96  E-value=9.4e-30  Score=208.93  Aligned_cols=230  Identities=13%  Similarity=0.176  Sum_probs=171.7

Q ss_pred             eccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----   82 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----   82 (260)
                      ....+.+.|..-..||+|+||.||-|+-  +|+-+|.|.+.++..     .........++|-.++++++.+.|+     
T Consensus       179 ~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi-----Kkr~ge~maLnEk~iL~kV~s~FiVslaYA  253 (591)
T KOG0986|consen  179 LQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI-----KKRKGETMALNEKQILEKVSSPFIVSLAYA  253 (591)
T ss_pred             hhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH-----HHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence            3445566677889999999999999886  699999998665543     2222345678999999999999998     


Q ss_pred             EeCCCchhhhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          83 LDDVQKSAIQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        83 ~~~~~~~~~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                      +......++  +++.++++.+        .+-+++..+..++.+|+.||++||+.+|++|||||+|||+|..|++.|+|.
T Consensus       254 feTkd~LCl--VLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDL  331 (591)
T KOG0986|consen  254 FETKDALCL--VLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDL  331 (591)
T ss_pred             ecCCCceEE--EEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeecc
Confidence            333344444  4445555433        456999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------HHHHHH
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFN  225 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~  225 (260)
                      |+|..+.........       .++.+++    +|+.+  ..|+...|.||+||++|+|+.|+-|+.       .+++-.
T Consensus       332 GLAvei~~g~~~~~r-------vGT~GYM----APEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdr  400 (591)
T KOG0986|consen  332 GLAVEIPEGKPIRGR-------VGTVGYM----APEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDR  400 (591)
T ss_pred             ceEEecCCCCccccc-------cCccccc----CHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHH
Confidence            999887665533211       2233333    33333  348889999999999999999998876       122222


Q ss_pred             HHH---hhccccCCccHHHHHHHHHHhcccccccc
Q psy7935         226 WIL---SSYRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       226 ~~~---~~~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ..+   .+++...+++..++.+.|..-++..|..+
T Consensus       401 r~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  401 RTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHhcchhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            222   34555567778888888888888777654

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=1e-28  Score=202.03  Aligned_cols=228  Identities=14%  Similarity=0.160  Sum_probs=147.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ...++|++.+.||+|+||.||+|.+.       +..||+|.+....       .......+.+|+.+++.++|+|++ +.
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~iv~~~   75 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNCHHVVRLL   75 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence            34566888999999999999999864       3579999742211       111245688999999999999999 22


Q ss_pred             C----CCchhh-------hhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          85 D----VQKSAI-------QTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                      +    ....++       ++|.+++.....       ...++...+..++.|++.||.|||+++++|+||||+||+++.+
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~  155 (277)
T cd05062          76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED  155 (277)
T ss_pred             EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCC
Confidence            2    111122       556666543211       1235677888899999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---H
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---F  220 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~  220 (260)
                      +.++|+|||++............    .....    ...+.+|+..  ..++.++|+||||++++++++ +..|+.   .
T Consensus       156 ~~~~l~dfg~~~~~~~~~~~~~~----~~~~~----~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~  227 (277)
T cd05062         156 FTVKIGDFGMTRDIYETDYYRKG----GKGLL----PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN  227 (277)
T ss_pred             CCEEECCCCCccccCCcceeecC----CCCcc----CHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            99999999998654322111000    00000    1112333333  457889999999999999998 454433   2


Q ss_pred             HHHHHHHHhhc----cccCCccHHHHHHHHHHhcccccc
Q psy7935         221 RDMFNWILSSY----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       221 ~~~~~~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .+.........    +...++.+.+++.+|...++..|.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  266 (277)
T cd05062         228 EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRP  266 (277)
T ss_pred             HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            23222222211    112233455666666666666554

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.96  E-value=1.2e-28  Score=202.99  Aligned_cols=230  Identities=20%  Similarity=0.203  Sum_probs=155.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--C
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--Q   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~   87 (260)
                      .+++.|++++.||+|+||.||+|++.  +..+++|.+....        ....+.+.+|+.+++.++|+|++ +.+.  .
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   80 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYMVEIEILATCNHPYIVKLLGAFYW   80 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--------HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence            34566889999999999999999984  7899999854321        11245688899999999999999 3321  1


Q ss_pred             chhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ....+.+++|+.+..+       ...+++..+..++.|++.|++|||+++++||||||+||+++.++.++|+|||++...
T Consensus        81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            2223335555544332       234788999999999999999999999999999999999999999999999987653


Q ss_pred             cccccccccccccccceeeeeeeeeecCc-c--ccccccccceeEeecceeeeeccccccccH---HHHHHHHHhhcc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSK-G--TLQSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSSYR--  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~--  232 (260)
                      .........      ...+..+.+|+... .  ....++.++|+||+|++++++++|..|+..   .+...+.....+  
T Consensus       161 ~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  234 (292)
T cd06644         161 VKTLQRRDS------FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT  234 (292)
T ss_pred             cccccccce------ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc
Confidence            322111100      01111122222110 0  113367789999999999999999888652   222223222111  


Q ss_pred             ----ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ...+..+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~  262 (292)
T cd06644         235 LSQPSKWSMEFRDFLKTALDKHPETRPS  262 (292)
T ss_pred             CCCCcccCHHHHHHHHHHhcCCcccCcC
Confidence                112345677888888777777753

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.1e-28  Score=199.92  Aligned_cols=228  Identities=14%  Similarity=0.173  Sum_probs=153.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ...+.|++.+.||+|+||.||+|.+.       +..|++|.+....       .......+.+|+.++..++|+|++ ++
T Consensus         3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~   75 (277)
T cd05032           3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-------SMRERIEFLNEASVMKEFNCHHVVRLL   75 (277)
T ss_pred             cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-------CHHHHHHHHHHHHHHHhCCCCceeEEE
Confidence            34566888999999999999999874       2679999753211       111235688999999999999999 33


Q ss_pred             CC----Cchhh-------hhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          85 DV----QKSAI-------QTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        85 ~~----~~~~~-------~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                      +.    ...++       ++|.+++.....       ...+++..+..++.|++.||.|||+++++||||||+|||++.+
T Consensus        76 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~  155 (277)
T cd05032          76 GVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAED  155 (277)
T ss_pred             EEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCC
Confidence            32    11111       455555543221       1236778888899999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---H
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---F  220 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~  220 (260)
                      +.+||+|||+++..........    .+....+..    +.+|+..  ..+++++|+||||++++++++ +..|+.   .
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~----y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  227 (277)
T cd05032         156 LTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR----WMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN  227 (277)
T ss_pred             CCEEECCcccchhhccCccccc----CCCCCcccc----ccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence            9999999999875533221100    000111111    2233322  457889999999999999998 666653   3


Q ss_pred             HHHHHHHHhhc----cccCCccHHHHHHHHHHhcccccc
Q psy7935         221 RDMFNWILSSY----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       221 ~~~~~~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .+..+....+.    +...+..+.+++.+|...++..|.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  266 (277)
T cd05032         228 EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRP  266 (277)
T ss_pred             HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCC
Confidence            34444443321    222345566777777777777664

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0690|consensus

Probab=99.96  E-value=1.1e-29  Score=201.12  Aligned_cols=226  Identities=17%  Similarity=0.231  Sum_probs=176.8

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      +.+.|+.++.||+|.||.|-+|+.  +++.+|+|++.+...     .....-..-+.|-.+++..+||.+.     |...
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevi-----iakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~  240 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVI-----IAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ  240 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhe-----eehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC
Confidence            446688899999999999999997  599999998654432     1111234467788999999999887     5555


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++  +|+|.+++.+      .+.++++....+...|+.||.|||+++|++||||.+|.|+|.+|++||.|||+++.-
T Consensus       241 drlCF--VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~  318 (516)
T KOG0690|consen  241 DRLCF--VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE  318 (516)
T ss_pred             ceEEE--EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence            55555  7777777655      456899999999999999999999999999999999999999999999999999653


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh---cc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS---YR  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~---~~  232 (260)
                      -..          |....++++++.+.+|+.+  ..+...+|.|.+|+++|||++|+.|+.   -..+++-++.+   .|
T Consensus       319 I~~----------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP  388 (516)
T KOG0690|consen  319 IKY----------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP  388 (516)
T ss_pred             ccc----------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCC
Confidence            222          1222355566666677777  568899999999999999999999987   45566655554   45


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..-.+....++..|...+++.|..
T Consensus       389 r~ls~eAktLLsGLL~kdP~kRLG  412 (516)
T KOG0690|consen  389 RTLSPEAKTLLSGLLKKDPKKRLG  412 (516)
T ss_pred             ccCCHHHHHHHHHHhhcChHhhcC
Confidence            555688889999999888888753

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=1.5e-28  Score=203.03  Aligned_cols=223  Identities=19%  Similarity=0.264  Sum_probs=153.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      ..|++.+.||.|++|.||+|.+  +++.|++|.+.....        .....+.+|+.+++.++|+|++ +.+.  ....
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   90 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--------PKKELIINEILVMKELKNPNIVNFLDSFLVGDE   90 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--------chHHHHHHHHHHHHhcCCCceeeeeeeEecCce
Confidence            4588899999999999999997  488999998643221        1135678899999999999999 3322  1112


Q ss_pred             hhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          91 IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        91 ~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      .+.+++|+.+..+     ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          91 LFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             EEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            2223444433322     22478899999999999999999999999999999999999999999999999875433221


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHH---HHHHHHHhh------cccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR---DMFNWILSS------YRRQ  234 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~~~~~------~~~~  234 (260)
                      ...          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+...   .........      .+..
T Consensus       171 ~~~----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  240 (296)
T cd06655         171 KRS----------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEK  240 (296)
T ss_pred             cCC----------CcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCccc
Confidence            110          01111122233333  34678899999999999999998887621   111111111      1122


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .++.+.+++.+|...++..|..
T Consensus       241 ~~~~~~~li~~~l~~dp~~Rpt  262 (296)
T cd06655         241 LSPIFRDFLNRCLEMDVEKRGS  262 (296)
T ss_pred             CCHHHHHHHHHHhhcChhhCCC
Confidence            2455678888888887777753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.96  E-value=8.9e-29  Score=200.56  Aligned_cols=211  Identities=14%  Similarity=0.170  Sum_probs=141.7

Q ss_pred             eeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh-
Q psy7935          22 ECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI-   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~-   91 (260)
                      +.||+|+||.||+|.+.     +..+|+|.+....       .......+.+|+.+++.++|||++ +++.   ..... 
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   73 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-------DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL   73 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC-------CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcE
Confidence            46899999999999862     3579999743211       111235688899999999999999 3331   12111 


Q ss_pred             --------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          92 --------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 --------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                              ++|.+++....  ...++..+..++.|++.||.|||+++++||||||+|||++.++.+||+|||++......
T Consensus        74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~  151 (262)
T cd05058          74 VVLPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDK  151 (262)
T ss_pred             EEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCC
Confidence                    56666665432  23566677889999999999999999999999999999999999999999998754332


Q ss_pred             ccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeeccccccc----------------------
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV----------------------  218 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~----------------------  218 (260)
                      .......       .....+.+ +.+|+..  ..++.++|+||||+++++++++..|+                      
T Consensus       152 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05058         152 EYYSVHN-------HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP  224 (262)
T ss_pred             cceeecc-------cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence            1100000       00001111 2233322  45778999999999999998864432                      


Q ss_pred             -----cHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         219 -----DFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       219 -----~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                           ...+++.+|+...+.. ||++.++++.+.++
T Consensus       225 ~~~~~~~~~li~~cl~~~p~~-Rp~~~~il~~l~~~  259 (262)
T cd05058         225 EYCPDPLYEVMLSCWHPKPEM-RPTFSELVSRIEQI  259 (262)
T ss_pred             CcCCHHHHHHHHHHcCCChhh-CCCHHHHHHHHHHH
Confidence                 2445666666644444 56667777666654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=1.9e-28  Score=201.90  Aligned_cols=187  Identities=17%  Similarity=0.174  Sum_probs=131.3

Q ss_pred             cccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ..|.+.+.||+|+||.||+|++.       +..+++|.....     .   ....+.+.+|++++++++|+|++ +.+  
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-----~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-----T---LAARKDFQREAELLTNLQHEHIVKFYGVC   76 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-----c---HHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            34677899999999999999852       345888864221     1   11235688999999999999999 222  


Q ss_pred             --CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE
Q psy7935          86 --VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL  143 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill  143 (260)
                        ....++       ++|.+++.....             ...+++..++.++.|++.||+|||+++++||||||+|||+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~  156 (291)
T cd05094          77 GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV  156 (291)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence              121111       566666643321             1237888899999999999999999999999999999999


Q ss_pred             ccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         144 SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       144 ~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      +.++.++|+|||++............    ...    .+...+.+|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       157 ~~~~~~~l~dfg~a~~~~~~~~~~~~----~~~----~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  226 (291)
T cd05094         157 GANLLVKIGDFGMSRDVYSTDYYRVG----GHT----MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPW  226 (291)
T ss_pred             ccCCcEEECCCCcccccCCCceeecC----CCC----CcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            99999999999998654332111000    000    011112333333  457788999999999999998 76663

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=9.7e-29  Score=216.25  Aligned_cols=180  Identities=15%  Similarity=0.147  Sum_probs=125.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC------CeE----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA------DIC----   82 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~------~i~----   82 (260)
                      .+.|++.+.||+|+||.||+|.+  .++.||||++....    ..     ......|+.+++.++|.      +++    
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~-----~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~  198 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KY-----TRDAKIEIQFMEKVRQADPADRFPLMKIQR  198 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hh-----HHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence            45688999999999999999998  47899999863211    11     12344556655555543      344    


Q ss_pred             EeCCCc--hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCC------
Q psy7935          83 LDDVQK--SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDH------  147 (260)
Q Consensus        83 ~~~~~~--~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~------  147 (260)
                      ++....  .++      +.|.+++...   ..+++..+..++.|++.||+|||+ .||+||||||+|||++.++      
T Consensus       199 ~~~~~~~~~~iv~~~~g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~  275 (467)
T PTZ00284        199 YFQNETGHMCIVMPKYGPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPV  275 (467)
T ss_pred             EEEcCCceEEEEEeccCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccc
Confidence            222211  112      4566666443   258888999999999999999998 5999999999999998755      


Q ss_pred             ----------cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         148 ----------HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       148 ----------~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                                .+||+|||.+........             ...+...+.+|+..  ..++.++|+||+||+++++++|+
T Consensus       276 ~~~~~~~~~~~vkl~DfG~~~~~~~~~~-------------~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~  342 (467)
T PTZ00284        276 TNRALPPDPCRVRICDLGGCCDERHSRT-------------AIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGK  342 (467)
T ss_pred             cccccCCCCceEEECCCCccccCccccc-------------cccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCC
Confidence                      499999998754322110             11122223344433  45788999999999999999999


Q ss_pred             cccc
Q psy7935         216 KAVD  219 (260)
Q Consensus       216 ~~~~  219 (260)
                      .|++
T Consensus       343 ~pf~  346 (467)
T PTZ00284        343 LLYD  346 (467)
T ss_pred             CCCC
Confidence            8875

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=1.7e-28  Score=197.80  Aligned_cols=216  Identities=16%  Similarity=0.140  Sum_probs=143.9

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchhh---
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSAI---   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~~---   91 (260)
                      +.||+|+||.||+|++  +++.+|+|......       .......+.+|++++++++||||+ ++    +....++   
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   73 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME   73 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEe
Confidence            4689999999999998  58899999743211       111235688999999999999999 22    2222122   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          ++|.+++...  ...+++..++.++.|++.||+|||+++++||||||+|||++.++.+||+|||++..........
T Consensus        74 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  151 (252)
T cd05084          74 LVQGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS  151 (252)
T ss_pred             eccCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccc
Confidence                4555555332  2347888899999999999999999999999999999999999999999999986543221100


Q ss_pred             ccccccccceeeeeeee-eecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc----cccCC
Q psy7935         168 VDLYVLKRNLTTIIVVA-YCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY----RRQNR  236 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~----~~~~~  236 (260)
                      ..         ...... .+.+|+..  ..++.++|+||+|++++++++ +..|+.   .......+....    +...+
T Consensus       152 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (252)
T cd05084         152 TG---------GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCP  222 (252)
T ss_pred             cC---------CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCC
Confidence            00         000111 12333332  457788999999999999987 655543   222222222211    12223


Q ss_pred             ccHHHHHHHHHHhcccccc
Q psy7935         237 KQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~  255 (260)
                      ..+.+++.+|...++..|.
T Consensus       223 ~~~~~li~~~l~~~p~~Rp  241 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRP  241 (252)
T ss_pred             HHHHHHHHHHcCCChhhCc
Confidence            5556677777766666664

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.96  E-value=1.4e-28  Score=198.87  Aligned_cols=218  Identities=19%  Similarity=0.251  Sum_probs=150.3

Q ss_pred             eeeccCCceeEEEEEEc---C--ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh-
Q psy7935          22 ECFKQGAEGRIFKTEYL---G--RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI-   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~-   91 (260)
                      +.||+|++|.||+|.+.   +  .+||+|.+......       ...+.+.+|+.++++++|||++ +++.   ....+ 
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   73 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-------DIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMV   73 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-------HHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEE
Confidence            46899999999999973   2  36899975433221       2346789999999999999999 2221   11111 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                            ++|.+++..... ..+++..++.++.|++.||+|||+++++|+||+|+||+++.++.+||+|||++........
T Consensus        74 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~  152 (257)
T cd05040          74 TELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED  152 (257)
T ss_pred             EEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc
Confidence                  567777655431 4578899999999999999999999999999999999999999999999999977644221


Q ss_pred             ccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc-----cc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY-----RR  233 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~-----~~  233 (260)
                      .    +....    ...+.. +.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+.........     +.
T Consensus       153 ~----~~~~~----~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  224 (257)
T cd05040         153 H----YVMEE----HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPE  224 (257)
T ss_pred             c----eeccc----CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCc
Confidence            1    10000    001111 2333333  457788999999999999998 877753   333333333211     11


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..+..+.+++.+|...++..|.
T Consensus       225 ~~~~~~~~li~~~l~~~p~~Rp  246 (257)
T cd05040         225 ACPQDIYNVMLQCWAHNPADRP  246 (257)
T ss_pred             cCCHHHHHHHHHHCCCCcccCC
Confidence            2245667777777777777774

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=2.5e-28  Score=201.73  Aligned_cols=214  Identities=14%  Similarity=0.199  Sum_probs=146.9

Q ss_pred             ccCcceeeccCCceeEEEEEEc--Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC----
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV----   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~----   86 (260)
                      .|++.+.||+|+||.||+|.+.  +.  .+++|.+..  ...     ....+.+.+|++++.++ .||||+ +++.    
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~--~~~-----~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~   75 (297)
T cd05089           3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE--FAS-----ENDHRDFAGELEVLCKLGHHPNIINLLGACENR   75 (297)
T ss_pred             cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc--cCC-----HHHHHHHHHHHHHHHhhcCCCchhheEEEEccC
Confidence            4777899999999999999874  33  467776421  111     11245688999999999 799998 3221    


Q ss_pred             Cchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          87 QKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                      ...++       ++|.+++.....             ...+++..+..++.|++.||+|||++|++||||||+|||++.+
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~  155 (297)
T cd05089          76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN  155 (297)
T ss_pred             CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC
Confidence            11111       567777644211             1347888999999999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeee-eecCcccc--ccccccceeEeecceeeeecc-cccccc---
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVA-YCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---  219 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---  219 (260)
                      +.+||+|||++..........            ..... .+.+|+..  ..++.++|+||||++++++++ |..|+.   
T Consensus       156 ~~~kl~dfg~~~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~  223 (297)
T cd05089         156 LASKIADFGLSRGEEVYVKKT------------MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT  223 (297)
T ss_pred             CeEEECCcCCCccccceeccC------------CCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            999999999985322111000            00001 12233322  456789999999999999987 765532   


Q ss_pred             -----------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -----------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -----------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                             ..+++.+|+...+.. |+++.++++.+..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~-Rp~~~~i~~~l~~~~  276 (297)
T cd05089         224 CAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYE-RPPFAQISVQLSRML  276 (297)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                                   346666666654444 667777777766554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=1.1e-28  Score=201.92  Aligned_cols=225  Identities=16%  Similarity=0.178  Sum_probs=151.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---   84 (260)
                      ..|.+.+.||+|+||.||+|++.       ++.||+|.+.... .      ....+.+.+|++++++++|+|++ ++   
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~   77 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-S------NDARKDFEREAELLTNFQHENIVKFYGVC   77 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-C------HHHHHHHHHHHHHHHhcCCCCchheeeEE
Confidence            45778899999999999999863       4689999753211 1      11246789999999999999998 22   


Q ss_pred             -CCCchhh-------hhHHHhhccCcc-----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          85 -DVQKSAI-------QTLISNLDSQNI-----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        85 -~~~~~~~-------~~l~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                       .....++       ++|.+++.....           ...+++..+..++.|++.|++|||++|++||||||+||+++.
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~  157 (280)
T cd05049          78 TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY  157 (280)
T ss_pred             ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence             2221111       556666643321           234788889999999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---  219 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---  219 (260)
                      ++.++|+|||++............    +....+..    +.+|+..  ..+++++|+||+|++++++++ |..|+.   
T Consensus       158 ~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~----y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~  229 (280)
T cd05049         158 DLVVKIGDFGMSRDVYTTDYYRVG----GHTMLPIR----WMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS  229 (280)
T ss_pred             CCeEEECCcccceecccCcceecC----CCCcccce----ecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence            999999999998654322110000    00011111    2233322  557889999999999999998 777653   


Q ss_pred             HHHHHHHHHhhcc----ccCCccHHHHHHHHHHhcccccc
Q psy7935         220 FRDMFNWILSSYR----RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       220 ~~~~~~~~~~~~~----~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..+..+.+..+..    ...+..+.+++.+|...++..|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  269 (280)
T cd05049         230 NEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRI  269 (280)
T ss_pred             HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            3444444443322    12234556666666666666664

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=1.6e-28  Score=200.14  Aligned_cols=227  Identities=17%  Similarity=0.209  Sum_probs=152.5

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC---
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV---   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~---   86 (260)
                      +.+.|+..+.||+|+||.||+|.+  .++.+|+|......    .     ....+.+|+.++.++ +|+|++ +.+.   
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   74 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----D-----EEEEIKQEINMLKKYSHHRNIATYYGAFIK   74 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----c-----cHHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence            345578889999999999999998  48899999864321    1     124577889999988 699999 2221   


Q ss_pred             -C----chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          87 -Q----KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        87 -~----~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                       .    ...+         ++|.+++.... ...+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+
T Consensus        75 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~  153 (272)
T cd06637          75 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV  153 (272)
T ss_pred             cCCCCCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEc
Confidence             1    1112         45555554322 2357888899999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcc---ccccccccceeEeecceeeeeccccccccHH-HHH--HH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG---TLQSYNHHLVMIDFGLSQIKVSTEDKAVDFR-DMF--NW  226 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~-~~~--~~  226 (260)
                      |||++............      ...+..+.+|+....   ....++.++|+||+|++++++++|..|+... ...  ..
T Consensus       154 Dfg~~~~~~~~~~~~~~------~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~  227 (272)
T cd06637         154 DFGVSAQLDRTVGRRNT------FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL  227 (272)
T ss_pred             cCCCceecccccccCCc------ccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH
Confidence            99998754332111100      011111222221110   0134777899999999999999998887511 111  11


Q ss_pred             HHhhc-c----ccCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSY-R----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~-~----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..... +    ...++.+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  262 (272)
T cd06637         228 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPT  262 (272)
T ss_pred             HhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCC
Confidence            11111 0    112457788888888777777754

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0662|consensus

Probab=99.96  E-value=4.6e-29  Score=182.44  Aligned_cols=180  Identities=19%  Similarity=0.259  Sum_probs=131.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--chhhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--KSAIQ   92 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~~~~~   92 (260)
                      |+-.++||+|+||+||+++.  +++-||+|.+.......      .-.....+|+.+++.++|.||+ +++.-  ..-+.
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrldddde------gvpssalreicllkelkhknivrl~dvlhsdkklt   77 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE------GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLT   77 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC------CCcHHHHHHHHHHHHhhhcceeehhhhhccCceeE
Confidence            45578999999999999996  48899999865433211      1134578999999999999999 44431  11122


Q ss_pred             hHHHhhccC------cccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          93 TLISNLDSQ------NITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        93 ~l~~~l~~~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                      .+++|+...      ++...+++..+..++.|+++||.|+|+++++||||||.|.||+.+|..|++|||+++.+.-+-  
T Consensus        78 lvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv--  155 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--  155 (292)
T ss_pred             EeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce--
Confidence            234443321      113468889999999999999999999999999999999999999999999999998765432  


Q ss_pred             cccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeeccc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~  214 (260)
                               -.++......++.|+..    .-++...|+||-||++.|+...
T Consensus       156 ---------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelana  198 (292)
T KOG0662|consen  156 ---------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANA  198 (292)
T ss_pred             ---------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhc
Confidence                     12222222334434333    4488999999999999997643

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.96  E-value=3.4e-28  Score=196.52  Aligned_cols=220  Identities=19%  Similarity=0.187  Sum_probs=156.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |+.++.||.|+||.||.++.  +++.+++|.+.......      .....+.+|++++++++|+|++     +.+.....
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   75 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE------KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLL   75 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch------hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEE
Confidence            67889999999999999887  48899999865433221      1235678999999999999999     22222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.+||+|||++......
T Consensus        76 ~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             EEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence            1       45666665432 335788899999999999999999999999999999999999999999999998765433


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcccc---
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQ---  234 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---  234 (260)
                      .....          .. .+.+.| +|+..  ...+.++|+||+|++++++.++..|+.   ..+....+..+....   
T Consensus       155 ~~~~~----------~~-~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd08221         155 YSMAE----------TV-VGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVS  223 (256)
T ss_pred             ccccc----------cc-CCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            21100          01 112222 33322  236778999999999999999988765   334444444332221   


Q ss_pred             -CCccHHHHHHHHHHhcccccc
Q psy7935         235 -NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 -~~~~~~~il~~l~~~~~~~r~  255 (260)
                       .+..+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~R~  245 (256)
T cd08221         224 VYSSELISLVHSLLQQDPEKRP  245 (256)
T ss_pred             ccCHHHHHHHHHHcccCcccCC
Confidence             245678888888877777774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=3e-28  Score=199.37  Aligned_cols=216  Identities=16%  Similarity=0.262  Sum_probs=150.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--Cc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ...|++.+.||+|+||.||+|.+.  |+    .+++|.......       ......+.+|+.++.+++|+|++ +++  
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   78 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-------PKANKEILDEAYVMASVDHPHVVRLLGIC   78 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-------HHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            456788899999999999999873  33    588886432221       12346788999999999999999 222  


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...  ...+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++
T Consensus        79 ~~~~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~  156 (279)
T cd05057          79 LSSQVQLITQLMPLGCLLDYVRNH--KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLA  156 (279)
T ss_pred             ecCceEEEEecCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccc
Confidence             111111       5666666543  224788999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      +...........    .     ...... +.+|+..  ..++.++|+||+|++++++++ |..|++              
T Consensus       157 ~~~~~~~~~~~~----~-----~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  227 (279)
T cd05057         157 KLLDVDEKEYHA----E-----GGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG  227 (279)
T ss_pred             ccccCcccceec----C-----CCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC
Confidence            765432211000    0     000111 2233333  457789999999999999998 766643              


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                  ..+++.+|+...+.. ||++.++++.+.++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~l~~~p~~-Rp~~~~l~~~l~~~  268 (279)
T cd05057         228 ERLPQPPICTIDVYMVLVKCWMIDAES-RPTFKELINEFSKM  268 (279)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhh-CCCHHHHHHHHHHH
Confidence                        223445555544433 56667777666655

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=2.9e-28  Score=198.51  Aligned_cols=216  Identities=16%  Similarity=0.200  Sum_probs=148.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.+.+.+.||+|+||.||+|.+.     ...|++|......       .....+.+.+|+.+++++.|||++ +++   
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~   77 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-------SPSVREKFLQEAYIMRQFDHPHIVKLIGVIT   77 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-------CHHHHHHHHHHHHHHHhCCCCchhceeEEEc
Confidence            445778899999999999999873     2368888743221       012346789999999999999999 332   


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~  155 (270)
T cd05056          78 ENPVWIVMELAPLGELRSYLQVN--KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSR  155 (270)
T ss_pred             CCCcEEEEEcCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceee
Confidence            222222       5666666443  2347888999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------  219 (260)
                      ...........          .....+ +.+|+..  ..++.++|+||+|++++++++ |..|+.               
T Consensus       156 ~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~  225 (270)
T cd05056         156 YLEDESYYKAS----------KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE  225 (270)
T ss_pred             ecccccceecC----------CCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence            65433111100          000111 2233322  456788999999999999875 665532               


Q ss_pred             -----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                 +.+++.+|+...|.. |+++.++++.+.++.
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~P~~-Rpt~~~~~~~l~~~~  266 (270)
T cd05056         226 RLPMPPNCPPTLYSLMTKCWAYDPSK-RPRFTELKAQLSDIL  266 (270)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                       344555555544443 456666666665543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=2.9e-28  Score=198.22  Aligned_cols=186  Identities=17%  Similarity=0.240  Sum_probs=130.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--Cc---cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GR---SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      +.|+..+.||+|+||.||+|++.  ++   .+++|.+.... .      ....+.+.+|++++.+++|+|++     +.+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-T------EKQRQDFLSEASIMGQFSHHNIIRLEGVVTK   77 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-C------HHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence            35677899999999999999973  33   68888753221 1      11245688999999999999998     222


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..+..++.|++.|++|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~  155 (268)
T cd05063          78 FKPAMIITEYMENGALDKYLRDH--DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSR  155 (268)
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccce
Confidence            222222       4455555332  2357888899999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ...........        .......+.| +|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       156 ~~~~~~~~~~~--------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~  211 (268)
T cd05063         156 VLEDDPEGTYT--------TSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY  211 (268)
T ss_pred             eccccccccee--------ccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCC
Confidence            55432111000        0000011122 22222  456789999999999999887 77775

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=6.9e-28  Score=199.99  Aligned_cols=185  Identities=14%  Similarity=0.155  Sum_probs=133.7

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~   86 (260)
                      +...|+..+.||+|+||.||+|+.  .++.|++|.+......     .......+.+|+++++.++|||++ +    .+.
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~   87 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE   87 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-----cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC
Confidence            344588899999999999999997  4889999985432211     111235688999999999999999 2    222


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...+  .+++|+.+...      ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++...
T Consensus        88 ~~~~--lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~  165 (307)
T cd06607          88 HTAW--LVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLV  165 (307)
T ss_pred             CeEE--EEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceec
Confidence            2222  24444432110      234788899999999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCccc-----cccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT-----LQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......          .....    +.+|+.     ...++.++|+||||++++++++|..|+.
T Consensus       166 ~~~~~~----------~~~~~----y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~  215 (307)
T cd06607         166 SPANSF----------VGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF  215 (307)
T ss_pred             CCCCCc----------cCCcc----ccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence            332110          01111    122222     2447789999999999999999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.96  E-value=2e-28  Score=202.91  Aligned_cols=221  Identities=15%  Similarity=0.172  Sum_probs=148.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC   82 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~   82 (260)
                      ...+.+++.+.||+|+||.||+|++.         +..|++|..... ..      ......+.+|+.+++.+ +||||+
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~------~~~~~~~~~E~~~l~~l~~h~~i~   84 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-AT------EKDLSDLVSEMEMMKMIGKHKNII   84 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cc------hHHHHHHHHHHHHHHhhccCCCch
Confidence            44566888999999999999999752         346888874321 11      11235688999999999 899998


Q ss_pred             -EeC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          83 -LDD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        83 -~~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                       +++    ....++       ++|.+++.....             ...++...+..++.|++.||+|||++|++|||||
T Consensus        85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk  164 (304)
T cd05101          85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA  164 (304)
T ss_pred             heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence             222    111111       566666654211             1346778888899999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-c
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-E  214 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~  214 (260)
                      |+||+++.++.+||+|||+++............  .  ...+    ..+.+|+..  ..++.++|+||+|++++++.+ +
T Consensus       165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~--~--~~~~----~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g  236 (304)
T cd05101         165 ARNVLVTENNVMKIADFGLARDVNNIDYYKKTT--N--GRLP----VKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG  236 (304)
T ss_pred             cceEEEcCCCcEEECCCccceeccccccccccc--C--CCCC----ceeeCchhhccCCCCchhhHHHHHHHHHHHHcCC
Confidence            999999999999999999987654322111000  0  0000    112233332  457789999999999999987 4


Q ss_pred             cccc--------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         215 DKAV--------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       215 ~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      ..|+                          ...+++.+|+...+.. |+++.++++.|.++
T Consensus       237 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~-Rps~~e~l~~l~~~  296 (304)
T cd05101         237 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSH-RPTFKQLVEDLDRI  296 (304)
T ss_pred             CCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhh-CCCHHHHHHHHHHH
Confidence            4332                          2345666666644444 56667777766654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.96  E-value=2.9e-28  Score=200.70  Aligned_cols=185  Identities=19%  Similarity=0.199  Sum_probs=130.6

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~   88 (260)
                      +.|.+.+.||+|+||.||+|.+  +|+.+++|++..+....       ....+.+|+.+++.++|+||+ +.    +...
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   77 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-------VPFTAIREASLLKGLKHANIVLLHDIIHTKET   77 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-------CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCe
Confidence            3477789999999999999987  48899999864332111       123567899999999999998 22    2222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      +.+.+++...  ...+++..+..++.|++.||.|||+++++|+||||+|||++.++.++|+|||+++....
T Consensus        78 ~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  155 (291)
T cd07870          78 LTFVFEYMHTDLAQYMIQH--PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSI  155 (291)
T ss_pred             EEEEEecccCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence            222      3333333221  12466777888999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......      ....+..    +.+|+..   ..++.++|+||+|++++++++|..|++
T Consensus       156 ~~~~~~------~~~~~~~----y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~  205 (291)
T cd07870         156 PSQTYS------SEVVTLW----YRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFP  205 (291)
T ss_pred             CCCCCC------Ccccccc----ccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            211110      0011111    2223322   236778999999999999999988875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=5.2e-28  Score=196.90  Aligned_cols=188  Identities=17%  Similarity=0.192  Sum_probs=131.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      .+++.+.||+|+||.||+|.+.  +   ..|++|.+... .      .......+.+|+.++++++|||++ +.    +.
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~   77 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-Y------TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS   77 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-C------CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC
Confidence            4677899999999999999974  3   35999975322 1      111246789999999999999999 22    22


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...  ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~  155 (269)
T cd05065          78 RPVMIITEFMENGALDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRF  155 (269)
T ss_pred             CceEEEEecCCCCcHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccc
Confidence            22222       4555555433  23578888999999999999999999999999999999999999999999999875


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ...........    ....... ...+.+|+..  ..++.++|+||+|++++++++ |..|+
T Consensus       156 ~~~~~~~~~~~----~~~~~~~-~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~  212 (269)
T cd05065         156 LEDDTSDPTYT----SSLGGKI-PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  212 (269)
T ss_pred             cccCccccccc----cccCCCc-ceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCC
Confidence            54322111000    0000000 0012233332  456789999999999999876 76664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.95  E-value=2.3e-28  Score=198.86  Aligned_cols=224  Identities=14%  Similarity=0.162  Sum_probs=149.0

Q ss_pred             cccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      ..|++.+.||+|+||.||+|.+.     +..+++|.+.... .    .  ...+.+.+|+.++.+++||||+ +.+    
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~----~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-T----E--KQRRDFLSEASIMGQFDHPNIIHLEGVVTK   76 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-C----H--HHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            34677899999999999999873     2368888753211 1    1  1245789999999999999999 222    


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..+..++.|++.|++|||+++++||||||+|||++.++.++|+|||++.
T Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~  154 (267)
T cd05066          77 SKPVMIVTEYMENGSLDAFLRKH--DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSR  154 (267)
T ss_pred             CCccEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccc
Confidence            222221       3455555432  2347888889999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~  232 (260)
                      ...........   ......+.    .+.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+....+..+..
T Consensus       155 ~~~~~~~~~~~---~~~~~~~~----~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~  227 (267)
T cd05066         155 VLEDDPEAAYT---TRGGKIPI----RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR  227 (267)
T ss_pred             ccccccceeee---cCCCccce----eecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc
Confidence            65433211100   00000001    12233333  457889999999999999776 777654   2334444433322


Q ss_pred             cc----CCccHHHHHHHHHHhcccccc
Q psy7935         233 RQ----NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~----~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..    .++.+.+++.+|...++.+|.
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp  254 (267)
T cd05066         228 LPAPMDCPAALHQLMLDCWQKDRNERP  254 (267)
T ss_pred             CCCCCCCCHHHHHHHHHHcccCchhCC
Confidence            11    134556666666666666664

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=1.9e-28  Score=203.48  Aligned_cols=181  Identities=18%  Similarity=0.242  Sum_probs=131.6

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .|++.+.||+|+||.||++.+  ++..+++|.+....       .......+.+|++++++++||||+ +    .+....
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-------KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEI   74 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEE
Confidence            477889999999999999998  47788888753221       111245688999999999999998 2    222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++...   ..+++..+..++.|++.||.|||+ ++++|+||||+|||++.++.++|+|||++....
T Consensus        75 ~lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  151 (308)
T cd06615          75 SICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  151 (308)
T ss_pred             EEEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc
Confidence            22       3455554332   357888899999999999999998 599999999999999999999999999986543


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       152 ~~~~~------------~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~  199 (308)
T cd06615         152 DSMAN------------SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP  199 (308)
T ss_pred             ccccc------------cCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence            22110            01111112233322  346788999999999999999987754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.95  E-value=2.5e-28  Score=200.98  Aligned_cols=224  Identities=19%  Similarity=0.228  Sum_probs=155.4

Q ss_pred             cCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC---C-
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD---V-   86 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~---~-   86 (260)
                      |++.+.||.|+||.||++++     +|+.||+|++.....    .......+.+.+|+.+++++ .|+||+ +.+   . 
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~----~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~   77 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI----VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD   77 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh----hhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC
Confidence            56789999999999999986     478899998543211    11111245678899999999 589998 322   1 


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||.|||++|++||||+|+|||++.++.++|+|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  154 (290)
T cd05613          78 TKLHLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKE  154 (290)
T ss_pred             CeEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence            11112       4555555433   2478888888999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc-------HHHHHHHHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWIL  228 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~  228 (260)
                      ........  .+       ...+...+.+|+..    ...+.++|+||+|++++++++|..|+.       ..++...+.
T Consensus       155 ~~~~~~~~--~~-------~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~  225 (290)
T cd05613         155 FHEDEVER--AY-------SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL  225 (290)
T ss_pred             cccccccc--cc-------cccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh
Confidence            53321110  00       01111112233332    346778999999999999999988864       234444444


Q ss_pred             hhcc---ccCCccHHHHHHHHHHhcccccccc
Q psy7935         229 SSYR---RQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       229 ~~~~---~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ...+   ...++.+.+++++|...++..|..+
T Consensus       226 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~  257 (290)
T cd05613         226 KSEPPYPQEMSALAKDIIQRLLMKDPKKRLGC  257 (290)
T ss_pred             ccCCCCCccCCHHHHHHHHHHhcCCHHHhcCC
Confidence            3322   2234567889999998888888743

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0607|consensus

Probab=99.95  E-value=5.7e-29  Score=196.49  Aligned_cols=209  Identities=17%  Similarity=0.214  Sum_probs=160.1

Q ss_pred             ceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCCCchhh-
Q psy7935          21 AECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDVQKSAI-   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~~~~~~-   91 (260)
                      .+.||+|+|+.|--|..  +|.++|||++.+. ..+       .+.++.+|++++.+. .|+||+     |.+....++ 
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gH-------sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLV  154 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGH-------SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLV  154 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcC-Cch-------HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEE
Confidence            57899999999999886  6999999986543 222       257889999999888 499999     555555555 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC---CcEEEEeecccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVS  162 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~---~~~kl~DFg~~~~~~~  162 (260)
                            |.|..+|..+   +.+++.++.++..+|+.||.|||++||.||||||+|||....   .-+||+||.+......
T Consensus       155 fEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~  231 (463)
T KOG0607|consen  155 FEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL  231 (463)
T ss_pred             EecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccccc
Confidence                  5566655543   479999999999999999999999999999999999999873   4689999998755332


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc----------------
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD----------------  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~----------------  219 (260)
                      ..+-.  . .....+.++++.+.+++|+..       .+|+.+.|.||+|+++|-|+.|-.|+.                
T Consensus       232 ~~~~s--p-astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr  308 (463)
T KOG0607|consen  232 NNDCS--P-ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCR  308 (463)
T ss_pred             CCCCC--C-CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccH
Confidence            22111  1 122345566677777777655       568899999999999999999877654                


Q ss_pred             --HHHHHHHHHhhccccCCccHHHHH
Q psy7935         220 --FRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       220 --~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                        -..+++++.+++..+...+|..|.
T Consensus       309 ~CQ~~LFesIQEGkYeFPdkdWahIS  334 (463)
T KOG0607|consen  309 VCQNKLFESIQEGKYEFPDKDWAHIS  334 (463)
T ss_pred             HHHHHHHHHHhccCCcCChhhhHHhh
Confidence              357889999998888777775443

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.95  E-value=1.5e-28  Score=201.82  Aligned_cols=186  Identities=18%  Similarity=0.260  Sum_probs=133.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~   91 (260)
                      .|+..+.||+|+||.||+|.+  +++++|+|.+...... .     ...+.+.+|+++++.++|||++ +++.  .....
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   75 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-K-----MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRL   75 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-c-----hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeE
Confidence            467789999999999999998  4889999985432211 1     1245678899999999999999 2211  12222


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++|+.+..+      ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++........
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  155 (286)
T ss_pred             EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence            335555543222      22478899999999999999999999999999999999999999999999999876543321


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...          .. .+...| +|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~----------~~-~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~  202 (286)
T cd07846         156 VYT----------DY-VATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP  202 (286)
T ss_pred             ccC----------cc-cceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence            110          00 111222 23322   235678999999999999999976653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.95  E-value=3.4e-28  Score=197.53  Aligned_cols=228  Identities=14%  Similarity=0.170  Sum_probs=154.0

Q ss_pred             cCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~   91 (260)
                      ++..+.||+|+||.||+|.. +++.+|+|.+..+......  .......+.+|++++++++|+|++ +.+    ....++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLA--AEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhh--HHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            56678999999999999987 5888999986544322111  112235688999999999999998 222    211111


Q ss_pred             -------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          92 -------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 -------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                             ++|.+++...   ..+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus        80 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          80 FMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence                   4555555432   247888889999999999999999999999999999999999999999999987553221


Q ss_pred             cccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHHH---HHHHHHh------hcc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFRD---MFNWILS------SYR  232 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~---~~~~~~~------~~~  232 (260)
                      ......    ..... ..+...| +|+..  ..++.++|+||+|++++++++|..|+...+   .......      ..+
T Consensus       157 ~~~~~~----~~~~~-~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  231 (265)
T cd06631         157 LHGTHS----NMLKS-MHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLP  231 (265)
T ss_pred             cccccc----ccccc-cCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCC
Confidence            110000    00001 1122222 33333  346788999999999999999998876211   1111111      112


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...+..+.+++++|...++..|.
T Consensus       232 ~~~~~~~~~~i~~~l~~~p~~Rp  254 (265)
T cd06631         232 DSFSAAAIDFVTSCLTRDQHERP  254 (265)
T ss_pred             CCCCHHHHHHHHHHhcCCcccCC
Confidence            22345677888888888888775

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.95  E-value=3.9e-28  Score=197.43  Aligned_cols=190  Identities=17%  Similarity=0.226  Sum_probs=135.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|+..+.||+|+||.||+|.+  +++.|++|.+.......   ........+.+|+.++++++|||++ +.+    ....
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   79 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP---ETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEK   79 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc---hhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCC
Confidence            467789999999999999997  48899999865433211   1111235688999999999999999 322    1112


Q ss_pred             hh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          90 AI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+         ++|.+++...   ..+++...+.++.|++.||+|||+++++||||+|+||+++.++.++|+|||++...
T Consensus        80 ~~~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651          80 TLTIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            22         3455555432   24778888899999999999999999999999999999999999999999998754


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ..........       ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       157 ~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~  210 (266)
T cd06651         157 QTICMSGTGI-------RSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWA  210 (266)
T ss_pred             ccccccCCcc-------ccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence            3221111100       000111112233322  346788999999999999999988876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=1.1e-28  Score=203.89  Aligned_cols=187  Identities=19%  Similarity=0.278  Sum_probs=135.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      ...|++.+.||+|++|.||+|.+  .++.||+|.+......        ..+.+.+|+.+++.++|+|++ +++.  ...
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   89 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVGD   89 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            35688999999999999999997  4899999986432211        135678899999999999999 3221  111


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ..+.+++|+.+..+     ...+++..+..++.|++.||.|||+.+++||||||+|||++.++.++|+|||++.......
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~  169 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (297)
T ss_pred             EEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence            22334455444332     2246788889999999999999999999999999999999999999999999986543322


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....          ..+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       170 ~~~~~----------~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~  216 (297)
T cd06656         170 SKRST----------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL  216 (297)
T ss_pred             cCcCc----------ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            11100          0011112233322  446788999999999999999987754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=6e-28  Score=195.05  Aligned_cols=221  Identities=18%  Similarity=0.232  Sum_probs=154.9

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |+..+.||+|+||.||+++.  .|+.+++|.+......     . .....+.+|+.++++++|||++ +.+    ....+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-----~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-----P-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLY   75 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-----h-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEE
Confidence            67789999999999999998  4889999986432221     1 1235688999999999999999 322    22222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++.... ...+++..+..++.|++.|++|||+++++|+||+|+|||++.++.++|+|||++......
T Consensus        76 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~  154 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST  154 (256)
T ss_pred             EEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence            2       34555554322 224678888999999999999999999999999999999999999999999998765432


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc----c
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR----R  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~  233 (260)
                      ......      .     .+.+.| +|+..  ...+.++|+||+|++++++++|..|+.   ..+.......+..    .
T Consensus       155 ~~~~~~------~-----~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (256)
T cd08218         155 VELART------C-----IGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSS  223 (256)
T ss_pred             hhhhhh------c-----cCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcc
Confidence            211100      0     111122 22222  446778999999999999999987765   3444444444332    2


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++++|.+.++..|..
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~  246 (256)
T cd08218         224 HYSYDLRNLVSQLFKRNPRDRPS  246 (256)
T ss_pred             cCCHHHHHHHHHHhhCChhhCcC
Confidence            22456678888888777777753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=1.1e-28  Score=201.82  Aligned_cols=182  Identities=20%  Similarity=0.257  Sum_probs=132.4

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~   88 (260)
                      ..|+..+.||+|+||.||+|.+  .++.||+|.+.....     .  ...+.+.+|++++++++|||++ +.    +...
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-----~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-----E--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK   76 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-----h--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence            4577789999999999999987  478999997542211     1  1235788999999999999999 22    2222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++..    ..+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06642          77 LWIIMEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             eEEEEEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEcccccccccc
Confidence            222       344444433    247888889999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ...... .         ...+...+.+|+..  ..++.++|+||+|++++++++|..|+
T Consensus       153 ~~~~~~-~---------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~  201 (277)
T cd06642         153 DTQIKR-N---------TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN  201 (277)
T ss_pred             Ccchhh-h---------cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCC
Confidence            322110 0         00111112233332  34678899999999999999998774

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.6e-28  Score=197.74  Aligned_cols=219  Identities=19%  Similarity=0.263  Sum_probs=153.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|+..+.||.|++|.||+|++  +++.+++|.+.... .      ......+.+|+.+++.++|+|++     +.+....
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   74 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-A------EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKL   74 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-c------chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeE
Confidence            467789999999999999998  48899999864321 1      11234678899999999999998     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...    .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus        75 ~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609          75 WIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             EEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            22       4555555543    578899999999999999999999999999999999999999999999999876654


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcccc---
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQ---  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~---  234 (260)
                      .......          ......+.+|+..  ..++.++|+||+|++++++++|..|+.   ...............   
T Consensus       151 ~~~~~~~----------~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  220 (274)
T cd06609         151 TMSKRNT----------FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEG  220 (274)
T ss_pred             ccccccc----------ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcc
Confidence            3211100          0011112223322  347889999999999999999988865   222222222222211   


Q ss_pred             --CCccHHHHHHHHHHhccccccc
Q psy7935         235 --NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 --~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        .++.+.+++.+|...++..|..
T Consensus       221 ~~~~~~~~~~l~~~l~~~p~~Rpt  244 (274)
T cd06609         221 NKFSKPFKDFVSLCLNKDPKERPS  244 (274)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcC
Confidence              2455778888887777777753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.95  E-value=7.6e-28  Score=197.26  Aligned_cols=226  Identities=16%  Similarity=0.195  Sum_probs=147.6

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhh-hcccCCCCeE-EeC----CCc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRG-LMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~~~h~~i~-~~~----~~~   88 (260)
                      .|++.+.||+|+||.||++++  +|+.||+|++.......       ....+..|... ++...|||++ +++    ...
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~   74 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-------EQKRLLMDLDISMRSVDCPYTVTFYGALFREGD   74 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-------HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCc
Confidence            477889999999999999998  48999999864332111       12345556654 5666899999 222    222


Q ss_pred             hhh------hhHHHhhccC-cccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 SAI------QTLISNLDSQ-NITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~------~~l~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .++      ++|.+++... .....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++...
T Consensus        75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          75 VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             EEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            222      3333443321 1134588999999999999999999997 9999999999999999999999999998755


Q ss_pred             cccccccccccccccceeeeeeeeeecCccc--cccccccceeEeecceeeeeccccccccH----HHHHHHHHhhccc-
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT--LQSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSYRR-  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-  233 (260)
                      ........       ...+..+.+|+...+.  ...++.++|+||+|++++++++|..|+..    .+.+.....+... 
T Consensus       155 ~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  227 (283)
T cd06617         155 VDSVAKTI-------DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQ  227 (283)
T ss_pred             cccccccc-------ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCC
Confidence            33211100       0111112222211111  13467889999999999999999888651    1222232332211 


Q ss_pred             ----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ..+..+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~l~~li~~~l~~~p~~Rp~  254 (283)
T cd06617         228 LPAEKFSPEFQDFVNKCLKKNYKERPN  254 (283)
T ss_pred             CCccccCHHHHHHHHHHccCChhhCcC
Confidence                12355677788887777777753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=2.1e-28  Score=198.96  Aligned_cols=224  Identities=18%  Similarity=0.187  Sum_probs=150.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|+..+.||+|+||.||+|++  +++.+|+|.+.....  .      ....+.+|+.+++.++|||++ +.+    ..
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~------~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~   79 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--E------DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD   79 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--h------HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence            34678889999999999999998  488999998643211  1      124577899999999999999 222    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...   ..+++..++.++.|++.|++|||++|++|+||||+||+++.++.++|+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd06645          80 KLWICMEFCGGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQI  156 (267)
T ss_pred             EEEEEEeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence            2221       4555555433   25788999999999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCc-cccccccccceeEeecceeeeeccccccccH----HHHHHHHHhhccc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSK-GTLQSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSYRR--  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--  233 (260)
                      ........      ....+..+.+|+... .....++.++|+||+|++++++.++..|+..    .............  
T Consensus       157 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~  230 (267)
T cd06645         157 TATIAKRK------SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK  230 (267)
T ss_pred             cCcccccc------cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc
Confidence            32211110      011111222222211 1123477899999999999999999877541    1111111111100  


Q ss_pred             -----cCCccHHHHHHHHHHhcccccc
Q psy7935         234 -----QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 -----~~~~~~~~il~~l~~~~~~~r~  255 (260)
                           ..+..+.+++.+|...++..|.
T Consensus       231 ~~~~~~~~~~~~~li~~~l~~~P~~R~  257 (267)
T cd06645         231 LKDKMKWSNSFHHFVKMALTKNPKKRP  257 (267)
T ss_pred             ccccCCCCHHHHHHHHHHccCCchhCc
Confidence                 1123467788888877777775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG1151|consensus

Probab=99.95  E-value=1.1e-28  Score=202.59  Aligned_cols=235  Identities=16%  Similarity=0.144  Sum_probs=173.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      +++|-.++.||+|+|+.||++.+  .++.||||+-... -.+.+.......+...+|..+.+.+.||.|+ .++.   ..
T Consensus       462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN-K~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt  540 (775)
T KOG1151|consen  462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN-KNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT  540 (775)
T ss_pred             HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhc-cchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc
Confidence            45678899999999999999998  4889999973221 1122222333455678899999999999999 4443   34


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhC--CceecCCCCCcEEEcc---CCcEEEEeeccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSN--NIIHGDLTTSNMILSS---DHHLVMIDFGLS  157 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~--~i~H~dlkp~Nill~~---~~~~kl~DFg~~  157 (260)
                      ..+.++.+|+.++.+      .+.++++++..|..||+.||.||.+.  .|+|-||||.|||+.+   .|.+||.|||++
T Consensus       541 dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS  620 (775)
T KOG1151|consen  541 DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS  620 (775)
T ss_pred             ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence            445778899988876      56799999999999999999999976  6999999999999986   578999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeeccccccccHHHHHHHHHhh
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSS  230 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (260)
                      +.+........|    |..+..-.++.||+.|++.       ..++.++|+||.|++++.-+.|++|+.-...-+.+++.
T Consensus       621 KIMdddSy~~vd----GmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe  696 (775)
T KOG1151|consen  621 KIMDDDSYNSVD----GMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE  696 (775)
T ss_pred             hhccCCccCccc----ceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence            998766544332    3344445556666554433       34788999999999999999999998733333333332


Q ss_pred             ----------cc--ccCCccHHHHHHHHHHhccccc
Q psy7935         231 ----------YR--RQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       231 ----------~~--~~~~~~~~~il~~l~~~~~~~r  254 (260)
                                .|  +...+...+++.+|..++.+.|
T Consensus       697 NTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR  732 (775)
T KOG1151|consen  697 NTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDR  732 (775)
T ss_pred             hchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhh
Confidence                      11  1224566788888877765555

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=2.6e-28  Score=202.73  Aligned_cols=188  Identities=22%  Similarity=0.262  Sum_probs=135.2

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~   86 (260)
                      +.+.|++.+.||+|+||.||+|.+  +|+.||+|.+....... .     ....+.+|+.++++++|+|++ +    .+.
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-G-----IPISSLREITLLLNLRHPNIVELKEVVVGK   78 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-C-----CcchhhHHHHHHHhCCCCCCcceEEEEecC
Confidence            456688999999999999999998  48999999865433211 1     123456799999999999998 2    222


Q ss_pred             Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....+        ++|.+++...  ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~l~~~l~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~  156 (309)
T cd07845          79 HLDSIFLVMEYCEQDLASLLDNM--PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLAR  156 (309)
T ss_pred             CCCeEEEEEecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceee
Confidence            22222        2333333322  2357888999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .........+.          ......+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       157 ~~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~  210 (309)
T cd07845         157 TYGLPAKPMTP----------KVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP  210 (309)
T ss_pred             ecCCccCCCCc----------ccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence            66443211100          0011112233332   346789999999999999999987764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=2.6e-28  Score=197.36  Aligned_cols=172  Identities=14%  Similarity=0.171  Sum_probs=122.4

Q ss_pred             eeeccCCceeEEEEEEcCc------------cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          22 ECFKQGAEGRIFKTEYLGR------------SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~~~------------~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      +.||+|+||.||+|.+.+.            .+++|......      .   ....+.+|+.++++++|||++ +.+.  
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~------~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~   71 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH------R---DSLAFFETASLMSQLSHKHLVKLYGVCV   71 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch------h---hHHHHHHHHHHHHcCCCcchhheeeEEe
Confidence            4689999999999998532            36677532111      0   146788999999999999999 3322  


Q ss_pred             -Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-------cEEE
Q psy7935          87 -QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-------HLVM  151 (260)
Q Consensus        87 -~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-------~~kl  151 (260)
                       ...++       ++|.+++....  ..++...+..++.|++.||+|||++||+||||||+|||++.++       .+||
T Consensus        72 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl  149 (259)
T cd05037          72 RDENIMVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKL  149 (259)
T ss_pred             cCCcEEEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEe
Confidence             22222       55666654432  2578888899999999999999999999999999999999877       8999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeeccc-cccc
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTE-DKAV  218 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~-~~~~  218 (260)
                      +|||++..........              ....+.+|+.+    ..++.++|+||+|+++++++++ ..|+
T Consensus       150 ~Dfg~a~~~~~~~~~~--------------~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~  207 (259)
T cd05037         150 SDPGIPITVLSREERV--------------ERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPL  207 (259)
T ss_pred             CCCCcccccccccccc--------------cCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCc
Confidence            9999987654311110              00112223322    3578889999999999999884 4443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=3.5e-28  Score=197.50  Aligned_cols=190  Identities=20%  Similarity=0.230  Sum_probs=134.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|.+.+.||+|+||.||.|.+  +++.|++|.+...... .  ......+.+.+|+.+++++.|||++ +.+    ....
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   79 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES-P--ETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMER   79 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC-c--ccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCc
Confidence            467789999999999999997  4889999986432211 1  1111235788899999999999999 322    2122


Q ss_pred             hh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          90 AI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+         ++|.+++...   ..+++.....++.|++.||+|||+++++|+||||+||+++.++.++|+|||++...
T Consensus        80 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652          80 TLSIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             eEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            22         4555555432   24677888899999999999999999999999999999999999999999998754


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ..........   .....+.    .+.+|+..  ..++.++|+||||++++++++|..|+.
T Consensus       157 ~~~~~~~~~~---~~~~~~~----~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  210 (265)
T cd06652         157 QTICLSGTGM---KSVTGTP----YWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWA  210 (265)
T ss_pred             cccccccccc---ccCCCCc----cccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCC
Confidence            3221110000   0001111    12233322  346788999999999999999988875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.95  E-value=7.8e-28  Score=198.07  Aligned_cols=185  Identities=19%  Similarity=0.249  Sum_probs=132.4

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|+..+.||+|++|.||+|.+  +++.||+|.+.......       ....+.+|++++++++|+||+ +.+    ...
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   77 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-------APFTAIREASLLKDLKHANIVTLHDIIHTKKT   77 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-------CchhHHHHHHHHhhCCCcceeeEEEEEecCCe
Confidence            4577889999999999999998  48899999865432111       123467899999999999999 222    221


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      ++|.+++...  ...+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus        78 ~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  155 (291)
T cd07844          78 LTLVFEYLDTDLKQYMDDC--GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSV  155 (291)
T ss_pred             EEEEEecCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCC
Confidence            222      3444444332  23578888999999999999999999999999999999999999999999999865432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......+      ..    ....+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~~~~------~~----~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~  205 (291)
T cd07844         156 PSKTYSN------EV----VTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP  205 (291)
T ss_pred             CCccccc------cc----cccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            2111110      00    11112233322   336788999999999999999987764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.95  E-value=4e-28  Score=199.61  Aligned_cols=191  Identities=16%  Similarity=0.187  Sum_probs=131.1

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L   83 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~   83 (260)
                      +...+.|++.+.||+|+||.||+|.+.       +..||+|.+....       .......+.+|+.++++++|+|++ +
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~   74 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-------SLRERIEFLNEASVMKGFTCHHVVRL   74 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-------CHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            344567889999999999999999753       4579999743211       111234678899999999999999 2


Q ss_pred             eC----CCchhh-------hhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          84 DD----VQKSAI-------QTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        84 ~~----~~~~~~-------~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      ++    ....++       ++|.+++.....       ....+...+..++.|++.||.|||+++|+||||||+||+++.
T Consensus        75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~  154 (288)
T cd05061          75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH  154 (288)
T ss_pred             EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence            22    222222       556666643211       123456778889999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccc
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKA  217 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~  217 (260)
                      ++.++|+|||+++..........    .+....+..    +.+|+..  ..++.++|+||+|++++++++ +..|
T Consensus       155 ~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~----y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p  221 (288)
T cd05061         155 DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP  221 (288)
T ss_pred             CCcEEECcCCccccccccccccc----cCCCccccc----ccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCC
Confidence            99999999999875433221100    000011111    2233332  457889999999999999987 4433

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG3087|consensus

Probab=99.95  E-value=2e-27  Score=174.66  Aligned_cols=203  Identities=44%  Similarity=0.646  Sum_probs=168.4

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhh---
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAI---   91 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~---   91 (260)
                      .++.+.||+.+.|+++.+.|+..+||..+.+.+++|.++.+..+.+..+|+..+.++..-+|.     ++|.....+   
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            478999999999999999999999999999999999999999999999999999998755554     777777666   


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC---CcEEEEeeccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~---~~~kl~DFg~~~~~~~~  163 (260)
                           .++.+|+...- ...........++.++-+.+.-||.++++|+||-++||++..+   ..+.++|||++.....+
T Consensus        91 ~~~g~~~vk~~i~~~~-~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~  169 (229)
T KOG3087|consen   91 FIDGASTVKDFILSTM-EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLP  169 (229)
T ss_pred             eccchhHHHHHHHHHc-cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcccCc
Confidence                 24444443322 1222333336789999999999999999999999999999873   35589999999999999


Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +++++|+|.+.+.+.                                 .|.   +....+++.++++|.. ......+++
T Consensus       170 EDKgVDLYVlErA~l---------------------------------sTh---~~~~~~fe~~~~~Y~~-~~K~~~avl  212 (229)
T KOG3087|consen  170 EDKGVDLYVLERAVL---------------------------------STH---DKKALLFEGFLEGYRA-SGKQSKAVL  212 (229)
T ss_pred             ccccceeeeehHhHh---------------------------------ccC---cccHHHHHHHHHHHHh-cchhhHHHH
Confidence            999999988877666                                 444   4456688999999984 467779999


Q ss_pred             HHHHHhcccccccccCC
Q psy7935         244 KTFAEVELRGRKRCMVG  260 (260)
Q Consensus       244 ~~l~~~~~~~r~~~~~~  260 (260)
                      +++.+++.|||+++|+|
T Consensus       213 kk~eeVRlRGRKR~mig  229 (229)
T KOG3087|consen  213 KKLEEVRLRGRKRSMIG  229 (229)
T ss_pred             HHHHHHhhccccccccC
Confidence            99999999999999998

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=4.1e-28  Score=196.98  Aligned_cols=210  Identities=11%  Similarity=0.114  Sum_probs=134.5

Q ss_pred             eeeccCCceeEEEEEEc--------------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC-
Q psy7935          22 ECFKQGAEGRIFKTEYL--------------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD-   85 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~-   85 (260)
                      +.||+|+||.||+|+..              ...|++|.+....        ......+.+|+.++..++||||+ +++ 
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~~~~~l~~l~hp~iv~~~~~   72 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--------RDISLAFFETASMMRQVSHKHIVLLYGV   72 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--------hhHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            46899999999999852              2357888643211        11235688899999999999999 333 


Q ss_pred             ---CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc-------
Q psy7935          86 ---VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH-------  148 (260)
Q Consensus        86 ---~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~-------  148 (260)
                         ....++       +.|..++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.       
T Consensus        73 ~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~  150 (262)
T cd05077          73 CVRDVENIMVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPF  150 (262)
T ss_pred             EecCCCCEEEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCce
Confidence               222222       3333333322  234788889999999999999999999999999999999987554       


Q ss_pred             EEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeec-cccccccHHH--
Q psy7935         149 LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVS-TEDKAVDFRD--  222 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~-~~~~~~~~~~--  222 (260)
                      ++++|||++.........          .    +..++.+|+..   ..++.++|+||||+++++++ .+..|.....  
T Consensus       151 ~~l~d~g~~~~~~~~~~~----------~----~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~  216 (262)
T cd05077         151 IKLSDPGIPITVLSRQEC----------V----ERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA  216 (262)
T ss_pred             eEeCCCCCCccccCcccc----------c----ccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh
Confidence            899999998654322110          0    11122233332   34778899999999999987 4555543111  


Q ss_pred             HHHHHHhhcc---ccCCccHHHHHHHHHHhcccccc
Q psy7935         223 MFNWILSSYR---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       223 ~~~~~~~~~~---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ....+.....   .....++.+++.+|...++..|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp  252 (262)
T cd05077         217 EKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRP  252 (262)
T ss_pred             HHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCc
Confidence            1111111111   11124455666666666666654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=6e-28  Score=198.26  Aligned_cols=221  Identities=15%  Similarity=0.191  Sum_probs=151.5

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|++++.||+|+||.||++.+.  ++.+|+|.+....       .......+.+|++++++++|+|++ +++    ....
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-------DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAV   74 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeE
Confidence            4788999999999999999984  8999999754221       111235688999999999999998 222    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++........+++..+..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||++....
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  154 (286)
T cd06622          75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV  154 (286)
T ss_pred             EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            22       3444444332112358889999999999999999997 599999999999999999999999999986553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeecccccccc---HHHHHH---HH
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFN---WI  227 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~---~~  227 (260)
                      .......        ..+.    .+.+|+..        ..++.++|+||+|++++++++|..|+.   ......   .+
T Consensus       155 ~~~~~~~--------~~~~----~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  222 (286)
T cd06622         155 ASLAKTN--------IGCQ----SYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI  222 (286)
T ss_pred             CCccccC--------CCcc----CccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence            3211100        0001    11122222        235778999999999999999998864   222222   22


Q ss_pred             Hhhc----cccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSY----RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~----~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+.    +...++.+.+++.+|...++..|..
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~  255 (286)
T cd06622         223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPT  255 (286)
T ss_pred             hhcCCCCCCcccCHHHHHHHHHHcccCcccCCC
Confidence            2221    1223456678888888777777753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=3.6e-28  Score=199.31  Aligned_cols=185  Identities=19%  Similarity=0.236  Sum_probs=131.9

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |+..+.||.|++|.||+|++  +|+.|+||.+...... ..     ....+.+|++++++++|||++ +.+    ....+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   75 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EG-----VPSTAIREISLLKELNHPNIVKLLDVIHTENKLY   75 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cc-----cchHHHHHHHHHHhcCCCCCcchhhhcccCCcEE
Confidence            66789999999999999998  4889999976433211 11     134688899999999999999 222    22222


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++.... ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus        76 ~v~e~~~~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          76 LVFEFLHQDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             EEeeccccCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence            2      33444443222 2357888999999999999999999999999999999999999999999999986553321


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....      ....    ...+.+|+..   ...+.++|+||+|++++++++|..|+.
T Consensus       155 ~~~~------~~~~----~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~  202 (284)
T cd07860         155 RTYT------HEVV----TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP  202 (284)
T ss_pred             cccc------cccc----cccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            1100      0001    1112223322   235778999999999999999987764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=8.6e-28  Score=199.48  Aligned_cols=197  Identities=17%  Similarity=0.209  Sum_probs=136.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +++.+++|.+.........      ...+.+|++++++++|+||+ +.    +..
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF------PITALREIKILKKLKHPNVVPLIDMAVERP   80 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCc------chhHHHHHHHHHhcCCCCccchhhheeccc
Confidence            45688899999999999999998  4889999986544322111      23467899999999999999 22    211


Q ss_pred             ch------hh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          88 KS------AI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        88 ~~------~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      ..      .+        +++.+.+...  ...+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|
T Consensus        81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~d  158 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDHDLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIAD  158 (311)
T ss_pred             ccccccCceEEEEEecCCcCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECc
Confidence            11      11        2233333222  23588999999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++.............-.......+...+.+.| +|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~  228 (311)
T cd07866         159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ  228 (311)
T ss_pred             CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCC
Confidence            9998765433211110000000001111222333 33322   346788999999999999999977654

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG2052|consensus

Probab=99.95  E-value=5.2e-29  Score=204.06  Aligned_cols=182  Identities=19%  Similarity=0.227  Sum_probs=133.1

Q ss_pred             cccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc--cCCCCeE-EeCCCc----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK--CRMADIC-LDDVQK----   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~-~~~~~~----   88 (260)
                      ...++.+.||+|.||.||+|+|+|+.||||++....           .....+|.++++.  ++|+||+ |+....    
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd-----------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g  279 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD-----------ERSWFRETEIYQTVMLRHENILGFIAADNKDNG  279 (513)
T ss_pred             heeEEEEEecCccccceeeccccCCceEEEEecccc-----------hhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence            446778999999999999999999999999854321           2345567777764  5999999 544321    


Q ss_pred             hhh-----------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCcEEEccCCcE
Q psy7935          89 SAI-----------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN--------NIIHGDLTTSNMILSSDHHL  149 (260)
Q Consensus        89 ~~~-----------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------~i~H~dlkp~Nill~~~~~~  149 (260)
                      ...           |+|+|||....    ++.....+++..++.||+|||..        .|.|||||..|||+..++.+
T Consensus       280 s~TQLwLvTdYHe~GSL~DyL~r~t----v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C  355 (513)
T KOG2052|consen  280 SWTQLWLVTDYHEHGSLYDYLNRNT----VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC  355 (513)
T ss_pred             ceEEEEEeeecccCCcHHHHHhhcc----CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence            111           99999999875    88888999999999999999953        59999999999999999999


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccccc----ccccceeEeecceeeeeccc
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQS----YNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~di~s~g~~~~~~~~~  214 (260)
                      .|+|+|+|....... ...|+ ....-.++-.+++|+...+.+..    .-..+||||||+++||+..+
T Consensus       356 ~IADLGLAv~h~~~t-~~idi-~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarR  422 (513)
T KOG2052|consen  356 CIADLGLAVRHDSDT-DTIDI-PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARR  422 (513)
T ss_pred             EEeeceeeEEecccC-CcccC-CCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHH
Confidence            999999997654332 11111 11122334444444444444421    22449999999999997654

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=4.2e-28  Score=196.54  Aligned_cols=223  Identities=18%  Similarity=0.227  Sum_probs=156.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |++.+.||.|+||.||++.+  .++.+++|.+......      ....+.+.+|++++++++|+|++ +++    .....
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT------EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC------HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCE
Confidence            66789999999999999998  4788999986433221      12246788999999999999999 332    22222


Q ss_pred             hhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhh-----hCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          91 IQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMH-----SNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        91 ~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH-----~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                      .+.+++|+.+..+          ...+++..++.++.|++.||.|||     +.+++|+||+|+||+++.++.++|+|||
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g  155 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG  155 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence            3334444433221          235788899999999999999999     9999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      ++...........          .......+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+
T Consensus       156 ~~~~~~~~~~~~~----------~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  225 (265)
T cd08217         156 LAKILGHDSSFAK----------TYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG  225 (265)
T ss_pred             ccccccCCccccc----------ccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC
Confidence            9876543321110          00111112223322  346788999999999999999988866   33444444333


Q ss_pred             cc----ccCCccHHHHHHHHHHhccccccc
Q psy7935         231 YR----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..    ...++.+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~  255 (265)
T cd08217         226 KFRRIPYRYSSELNEVIKSMLNVDPDKRPS  255 (265)
T ss_pred             CCCCCccccCHHHHHHHHHHccCCcccCCC
Confidence            22    223456778888888888888864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0664|consensus

Probab=99.95  E-value=5.1e-29  Score=193.21  Aligned_cols=188  Identities=20%  Similarity=0.279  Sum_probs=138.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      +.+....||.|+||.||.+++  .|+.|++|.+. ..     +......+++.+|++.+..++|.|++     +......
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~p-nv-----fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d  127 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMP-NV-----FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS  127 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcc-hH-----HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence            467788999999999999998  39999999742 21     23333467889999999999999998     2222332


Q ss_pred             hh---hhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI---QTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~---~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++   +.+.|.++....     .+.++.+.+.-++.||++||+|||+.+|+||||||.|.|+++++.+||+|||+++...
T Consensus       128 fFqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee  207 (449)
T KOG0664|consen  128 FFQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWD  207 (449)
T ss_pred             HHHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccc
Confidence            32   445555443211     3458888888899999999999999999999999999999999999999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........         .-+.+.++.+|+-+   ..++...||||.||++.|++.++.-++
T Consensus       208 ~d~~~hMT---------qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ  259 (449)
T KOG0664|consen  208 QRDRLNMT---------HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ  259 (449)
T ss_pred             hhhhhhhH---------HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence            44322110         11122223333322   458899999999999999988776555

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.95  E-value=3.1e-28  Score=200.24  Aligned_cols=227  Identities=14%  Similarity=0.125  Sum_probs=149.6

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD-   84 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~-   84 (260)
                      ..+.|++.+.||+|+||.||+|.+.       +..+++|.+.... .      ......+.+|+.++.++.|||++ ++ 
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~------~~~~~~~~~ei~~l~~l~h~~iv~~~~   75 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-S------ADMQADFQREAALMAEFDHPNIVKLLG   75 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-C------HHHHHHHHHHHHHHHhcCCCchheEEE
Confidence            3456888999999999999999863       5789999753221 1      11235688999999999999999 22 


Q ss_pred             ---CCCchhh-------hhHHHhhccCcc-------------------cccchHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy7935          85 ---DVQKSAI-------QTLISNLDSQNI-------------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGD  135 (260)
Q Consensus        85 ---~~~~~~~-------~~l~~~l~~~~~-------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~d  135 (260)
                         +....++       ++|.+++.....                   ...+++..++.++.|++.||+|||+++++|||
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~d  155 (288)
T cd05050          76 VCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRD  155 (288)
T ss_pred             EEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccc
Confidence               2222222       566666643210                   12367788889999999999999999999999


Q ss_pred             CCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      |||+||+++.++.++|+|||++.............    .....+    .+.+|+..  ..++.++|+||+|++++++++
T Consensus       156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~----~~~~~~----~y~aPE~~~~~~~~~~~Dv~slG~il~el~~  227 (288)
T cd05050         156 LATRNCLVGENMVVKIADFGLSRNIYSADYYKASE----NDAIPI----RWMPPESIFYNRYTTESDVWAYGVVLWEIFS  227 (288)
T ss_pred             ccHhheEecCCCceEECccccceecccCccccccC----CCccCh----hhcCHHHHhcCCCCchhHHHHHHHHHHHHHh
Confidence            99999999999999999999986543221100000    000011    12233322  457889999999999999987


Q ss_pred             -cccccc---HHHHHHHHHhhc----cccCCccHHHHHHHHHHhcccccc
Q psy7935         214 -EDKAVD---FRDMFNWILSSY----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       214 -~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                       +..|+.   ..+....+..+.    +...+..+.+++.+|...++..|.
T Consensus       228 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp  277 (288)
T cd05050         228 YGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRP  277 (288)
T ss_pred             CCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCC
Confidence             554542   333333333221    112234566666666666666664

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.95  E-value=4.3e-28  Score=199.83  Aligned_cols=188  Identities=19%  Similarity=0.247  Sum_probs=135.2

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|+..+.||+|+||.||+|.+.  ++.+++|.+.......      .....+.+|+.++++++|||++ +    .+...
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   78 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE------GFPITSLREINILLKLQHPNIVTVKEVVVGSNL   78 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc------cchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC
Confidence            34778899999999999999984  8899999875443221      1134567899999999999999 3    33321


Q ss_pred             hhhhhHHHhhccCc------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQN------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ...+.+++|+....      ....+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.....
T Consensus        79 ~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          79 DKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             CcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            33333444443210      023578999999999999999999999999999999999999999999999999876654


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......          .......+.+|+..   ...+.++|+||+|++++++.+|..|+.
T Consensus       159 ~~~~~~----------~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~  208 (293)
T cd07843         159 PLKPYT----------QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP  208 (293)
T ss_pred             Cccccc----------cccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence            321110          00111112233322   235788999999999999999977665

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=9.5e-28  Score=196.90  Aligned_cols=222  Identities=18%  Similarity=0.235  Sum_probs=153.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |++.+.||+|++|.||+|++  +|..|++|++.......      .....+.+|+.++++++|+|++ +.+    ....+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   75 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG------GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFV   75 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc------hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeE
Confidence            67789999999999999998  48899999865433211      1135688999999999999998 222    22111


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++...  ...+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus        76 ~v~e~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          76 LVMEYMPSDLSEVLRDE--ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             EEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence            1      4444444322  2357889999999999999999999999999999999999999999999999987654432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh--------
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS--------  230 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~--------  230 (260)
                      ...         .....+...+.+|+..   ..+++++|+||+|++++++++|..++.   ..+....++..        
T Consensus       154 ~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (286)
T cd07832         154 PRL---------YSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEET  224 (286)
T ss_pred             CCc---------cccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHH
Confidence            100         0011111122233332   335789999999999999999955443   11222222111        


Q ss_pred             -------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                               .....+..+.+++++|...++..|..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~  275 (286)
T cd07832         225 WPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS  275 (286)
T ss_pred             HhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC
Confidence                                     11122456678889998888888864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.95  E-value=1.9e-28  Score=203.91  Aligned_cols=190  Identities=16%  Similarity=0.251  Sum_probs=133.2

Q ss_pred             cCcceeeccCCceeEEEEEE----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          18 LQPAECFKQGAEGRIFKTEY----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      |++.+.||+|++|.||+|++    .++.||+|.+..........     .+.+.+|+.++.+++|||++     +.+...
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGI-----SQSACREIALLRELKHENVVSLVEVFLEHAD   76 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCc-----cHHHHHHHHHHHhcCCCCccceEEEEeCCCC
Confidence            66789999999999999998    46899999865432111111     24577899999999999999     333211


Q ss_pred             hhhhhHHHhhcc--------Ccc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc----CCcEEEEee
Q psy7935          89 SAIQTLISNLDS--------QNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS----DHHLVMIDF  154 (260)
Q Consensus        89 ~~~~~l~~~l~~--------~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~----~~~~kl~DF  154 (260)
                      ..++.+++++..        ...  ...+++..++.++.|++.||+|||+++++||||||+|||++.    ++.+||+||
T Consensus        77 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df  156 (316)
T cd07842          77 KSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDL  156 (316)
T ss_pred             ceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence            223333333322        111  225788999999999999999999999999999999999999    999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |++...........   ...    .......+.+|+..   ..++.++|+||+|+++++++++..|+.
T Consensus       157 g~~~~~~~~~~~~~---~~~----~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  217 (316)
T cd07842         157 GLARLFNAPLKPLA---DLD----PVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFK  217 (316)
T ss_pred             ccccccCCCccccc---ccC----CccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCc
Confidence            99876544322100   000    01111112333322   346788999999999999999877654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=5.6e-28  Score=198.75  Aligned_cols=187  Identities=16%  Similarity=0.164  Sum_probs=130.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ..|.+.+.||+|+||.||++...       +..+++|.+....        ......+.+|++++.+++|||++ +++  
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQHEHIVKFYGVC   76 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--------HHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            34677899999999999999851       3568888643211        11245688999999999999999 222  


Q ss_pred             --CCchhh-------hhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          86 --VQKSAI-------QTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                        ....++       ++|.+++.....          ...+++..+..++.|++.||+|||++|++||||||+|||++.+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~  156 (288)
T cd05093          77 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN  156 (288)
T ss_pred             ecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence              222222       556666543210          1237889999999999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      +.++|+|||++..........    ..+....+    ..+.+|+..  ..++.++|+||||++++++++ |..|+
T Consensus       157 ~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~----~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~  223 (288)
T cd05093         157 LLVKIGDFGMSRDVYSTDYYR----VGGHTMLP----IRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW  223 (288)
T ss_pred             CcEEeccCCccccccCCceee----cCCCCCcc----ccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            999999999987553321110    00000011    112233332  457789999999999999998 66554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0668|consensus

Probab=99.95  E-value=4.7e-29  Score=188.71  Aligned_cols=183  Identities=18%  Similarity=0.232  Sum_probs=144.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV--   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~--   86 (260)
                      ...+.|++.+++|+|-|+.||.|..  +++.++||++.+-           ..+.+.+|+.++..+. ||||+ +.+.  
T Consensus        35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----------kkkKIkREikIL~nL~gg~NIi~L~DiV~  103 (338)
T KOG0668|consen   35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----------KKKKIKREIKILQNLRGGPNIIKLLDIVK  103 (338)
T ss_pred             cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----------HHHHHHHHHHHHHhccCCCCeeehhhhhc
Confidence            3456799999999999999999995  6889999986432           2577999999999997 99999 3332  


Q ss_pred             --CchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccc
Q psy7935          87 --QKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 --~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~  160 (260)
                        .......++|+++....   -+.++...+..++.+++.||.|+|++||+|||+||.|+|||. ...++|+|+|+|.++
T Consensus       104 Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  104 DPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY  183 (338)
T ss_pred             CccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence              22222557888876543   334778888999999999999999999999999999999998 678999999999999


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeeccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      .+..+.+..+            .+-++..+++    ..++...|+|||||++..|+..+.|+
T Consensus       184 Hp~~eYnVRV------------ASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepF  233 (338)
T KOG0668|consen  184 HPGKEYNVRV------------ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF  233 (338)
T ss_pred             CCCceeeeee------------ehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcc
Confidence            8877655432            1112222222    67889999999999999998877664

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.95  E-value=1.1e-27  Score=196.49  Aligned_cols=222  Identities=15%  Similarity=0.211  Sum_probs=154.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |+..+.||.|++|.||+|++  +|+.||+|.+......       .....+.+|+.++++++|+|++     +.+....+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   74 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-------GTPSTAIREISLMKELKHENIVRLHDVIHTENKLM   74 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-------cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEE
Confidence            67789999999999999998  4889999986433211       0124567899999999999999     22222222


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++........+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~  154 (284)
T cd07836          75 LVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV  154 (284)
T ss_pred             EEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence            2      4555655443222457899999999999999999999999999999999999999999999999986543321


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh--------
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS--------  230 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~--------  230 (260)
                      .....      ..    +...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+...+....        
T Consensus       155 ~~~~~------~~----~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (284)
T cd07836         155 NTFSN------EV----VTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTEST  224 (284)
T ss_pred             ccccc------cc----ccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhh
Confidence            11100      00    01112223322   245778999999999999999987765   22222222111        


Q ss_pred             ------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 ------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                              .....++.+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~  274 (284)
T cd07836         225 WPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS  274 (284)
T ss_pred             HHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC
Confidence                                    01122455678899999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.95  E-value=5.8e-28  Score=195.02  Aligned_cols=220  Identities=17%  Similarity=0.193  Sum_probs=154.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |+..+.||+|+||.||++..  +++++++|.+........      ....+.+|++++++++|||++ +.+    ....+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKD------ERLAAQNECQVLKLLSHPNIIEYYENFLEDKALM   75 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccH------HHHHHHHHHHHHhhCCCCchhheeeeEecCCEEE
Confidence            67789999999999999997  488999998654332211      245788999999999999998 322    22222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~  162 (260)
                      +       ++|.+++.... ...+++..+..++.|++.|++|||++|++|+||+|+||+++. ++.++|+|||.+.....
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS  154 (256)
T ss_pred             EEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence            2       45666665432 334788899999999999999999999999999999999986 45689999999876543


Q ss_pred             cccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR----  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~----  232 (260)
                      ......            ..+.+ +.+|+..  ...+.++|+||+|+++++++++..|+.   .............    
T Consensus       155 ~~~~~~------------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T cd08220         155 KSKAYT------------VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPIS  222 (256)
T ss_pred             Cccccc------------cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCC
Confidence            321100            01111 2223222  346778999999999999999988766   2233333333221    


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       223 ~~~~~~l~~li~~~l~~~p~~Rpt  246 (256)
T cd08220         223 DRYSPDLRQLILSMLNLDPSKRPQ  246 (256)
T ss_pred             CCcCHHHHHHHHHHccCChhhCCC
Confidence            123456778888888777777754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.95  E-value=4.4e-28  Score=201.16  Aligned_cols=188  Identities=16%  Similarity=0.160  Sum_probs=131.3

Q ss_pred             ccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-E
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-L   83 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~   83 (260)
                      .+.|.+.+.||+|+||.||++++.         +..+|+|.+.... .      ......+.+|++++..+ +|+|++ +
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~------~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-T------EKDLSDLISEMEMMKMIGKHKNIINL   89 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-C------hHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            456888999999999999999863         2469999753221 1      11235688899999999 799998 2


Q ss_pred             eC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCC
Q psy7935          84 DD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTS  139 (260)
Q Consensus        84 ~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~  139 (260)
                      .+    ....++       ++|.+++.....             ...++...++.++.|++.||+|||++|++||||||+
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~  169 (307)
T cd05098          90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR  169 (307)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence            22    111111       577777754321             234788889999999999999999999999999999


Q ss_pred             cEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccc
Q psy7935         140 NMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDK  216 (260)
Q Consensus       140 Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~  216 (260)
                      |||++.++.++|+|||++.............  .  .....    .+.+|+..  ..++.++|+||+|++++++++ |..
T Consensus       170 Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~--~--~~~~~----~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~  241 (307)
T cd05098         170 NVLVTEDNVMKIADFGLARDIHHIDYYKKTT--N--GRLPV----KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS  241 (307)
T ss_pred             heEEcCCCcEEECCCcccccccccchhhccc--c--CCCcc----ceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence            9999999999999999986553221110000  0  00001    12233322  447789999999999999987 544


Q ss_pred             c
Q psy7935         217 A  217 (260)
Q Consensus       217 ~  217 (260)
                      |
T Consensus       242 p  242 (307)
T cd05098         242 P  242 (307)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=6.5e-28  Score=202.48  Aligned_cols=189  Identities=20%  Similarity=0.256  Sum_probs=135.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----C--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----V--   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~--   86 (260)
                      +.|++.+.||+|++|.||+|.+  +|+.|++|++...... ..     ....+.+|+.++++++||||+ +.+    .  
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   78 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PT-----LAKRTLRELKILRHFKHDNIIAIRDILRPPGA   78 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-cc-----chHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence            4577889999999999999997  4899999986432211 11     235677899999999999998 221    1  


Q ss_pred             Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....+        ++|.+++...   ..+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~l~~~~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855          79 DFKDVYVVMDLMESDLHHIIHSD---QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             CCceEEEEEehhhhhHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence            11112        4455555433   348899999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...........  ...    +..+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~~~~~~~~--~~~----~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~  213 (334)
T cd07855         156 GLSSSPTEHKY--FMT----EYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP  213 (334)
T ss_pred             eecccCcCCCc--ccc----cccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence            65432211100  000    11111112233322   347889999999999999999987764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=5.6e-28  Score=203.05  Aligned_cols=190  Identities=21%  Similarity=0.286  Sum_probs=133.8

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK-   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~-   88 (260)
                      +.|++.+.||+|+||.||+|++  +|++||+|.+....  ..     .....+.+|+.++++++|+|++ +.+.   .. 
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   77 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQ-----TFCQRTLREIKILRRFKHENIIGILDIIRPPSF   77 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cc-----hhHHHHHHHHHHHHhCCCCCcCchhheeecccc
Confidence            4578889999999999999997  48899999853211  11     1235577899999999999998 3221   11 


Q ss_pred             ---hhhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 ---SAIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ---~~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                         ..++.+++++.....    ...+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++....
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence               112233444332110    2348888999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........   .    ....+...+.+|+..   ..++.++|+||+|++++++++|+.|+.
T Consensus       158 ~~~~~~~~---~----~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~  211 (336)
T cd07849         158 PEHDHTGF---L----TEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP  211 (336)
T ss_pred             ccccccCC---c----CCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            32211110   0    001111122334332   356788999999999999999987653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=4.9e-28  Score=198.29  Aligned_cols=214  Identities=14%  Similarity=0.148  Sum_probs=143.6

Q ss_pred             eeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhh---hcccCCCCeE-E----eCCCchhh-
Q psy7935          23 CFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRG---LMKCRMADIC-L----DDVQKSAI-   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~---l~~~~h~~i~-~----~~~~~~~~-   91 (260)
                      .||+|+||.||++.+  +++.+|+|.+..........     ...+.+|..+   +....|+|++ +    ......++ 
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv   75 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-----ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFI   75 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH-----HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEE
Confidence            479999999999998  48899999865443322111     1223344433   3344789998 2    22222222 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                            ++|.+++...   ..+++..+..++.|++.||+|||+++++||||||+|||++.++.++|+|||++........
T Consensus        76 ~e~~~~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~  152 (279)
T cd05633          76 LDLMNGGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (279)
T ss_pred             EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc
Confidence                  4444444332   3588999999999999999999999999999999999999999999999999865432211


Q ss_pred             ccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc-----HHHHHHHHHh----hccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD-----FRDMFNWILS----SYRR  233 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~  233 (260)
                      ..        .    .+...+.+|+..   ..++.++|+||+|++++++++|..|+.     ..........    ..+.
T Consensus       153 ~~--------~----~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  220 (279)
T cd05633         153 HA--------S----VGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPD  220 (279)
T ss_pred             cC--------c----CCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCcc
Confidence            10        0    011112233322   246788999999999999999998874     1122222211    1222


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++++|...++..|..
T Consensus       221 ~~~~~~~~li~~~l~~~p~~R~~  243 (279)
T cd05633         221 SFSPELKSLLEGLLQRDVSKRLG  243 (279)
T ss_pred             ccCHHHHHHHHHHhcCCHHHhcC
Confidence            34567789999999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=1e-27  Score=194.59  Aligned_cols=225  Identities=18%  Similarity=0.283  Sum_probs=155.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .|++.+.||.|+||.||+|..  ++.++++|++.......       ....+.+|++.++.++|+|++ +    .+....
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-------SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDEL   74 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-------HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEE
Confidence            477889999999999999997  47899999864322211       245688999999999999999 2    222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++........+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        75 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          75 WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            22       45555554432123578888999999999999999999999999999999999999999999999876654


Q ss_pred             cccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeeccccccccH---HHHHHHHHhhccc--
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSSYRR--  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--  233 (260)
                      .......       ......+.+.| +|+..   ...+.++|+||+|++++++++|..|+..   .+.........+.  
T Consensus       155 ~~~~~~~-------~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  227 (267)
T cd06610         155 GGDRTRK-------VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSL  227 (267)
T ss_pred             Ccccccc-------ccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCc
Confidence            3322100       00111112222 33322   2578889999999999999999888752   2223222222211  


Q ss_pred             -------cCCccHHHHHHHHHHhcccccc
Q psy7935         234 -------QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 -------~~~~~~~~il~~l~~~~~~~r~  255 (260)
                             ..++.+.+++.+|...++..|.
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (267)
T cd06610         228 ETGADYKKYSKSFRKMISLCLQKDPSKRP  256 (267)
T ss_pred             CCccccccccHHHHHHHHHHcCCChhhCc
Confidence                   1124457788888777777775

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.5e-28  Score=194.68  Aligned_cols=222  Identities=19%  Similarity=0.209  Sum_probs=153.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|+..+.+|.|+||.||+|.+  +++.+++|.+......        ..+.+.+|++++++++|||++ +++    ..
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   73 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--------DFEIIQQEISMLKECRHPNIVAYFGSYLRRD   73 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--------hHHHHHHHHHHHHhCCCCChhceEEEEEeCC
Confidence            45678899999999999999998  3788999986432211        246788999999999999999 322    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++...
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  151 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQL  151 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhh
Confidence            2222       3455544332  135788899999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--c---cccccceeEeecceeeeeccccccccH---HHHHHHHHhh-c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q---SYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSS-Y  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~-~  231 (260)
                      .........          ......+.+|+..  .   .++.++|+||+|++++++++|..|+..   .+........ .
T Consensus       152 ~~~~~~~~~----------~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~  221 (262)
T cd06613         152 TATIAKRKS----------FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNF  221 (262)
T ss_pred             hhhhhcccc----------ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccC
Confidence            432211100          0011111222222  2   567789999999999999999887651   1111111111 1


Q ss_pred             c-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         232 R-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .       ...+..+.+++++|...++..|..
T Consensus       222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  253 (262)
T cd06613         222 PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT  253 (262)
T ss_pred             CCccccchhhhhHHHHHHHHHHcCCChhhCCC
Confidence            1       111345678888888888887754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.95  E-value=7.5e-28  Score=200.42  Aligned_cols=222  Identities=16%  Similarity=0.168  Sum_probs=149.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCe
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADI   81 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i   81 (260)
                      ..+.+.+.+.+.||+|+||.||+|++.         ...+|+|.+.... .      ......+.+|+.+++++ .||||
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~------~~~~~~~~~E~~~l~~l~~h~~i   80 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-T------DKDLADLISEMELMKLIGKHKNI   80 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-C------hHHHHHHHHHHHHHHhccCCCCe
Confidence            344567888999999999999999752         3568899753221 1      11134688899999999 69999


Q ss_pred             E-EeC---CCc-hhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          82 C-LDD---VQK-SAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        82 ~-~~~---~~~-~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      + +++   ... .++       ++|.+++.....             ...++...+..++.|++.||+|||++|++||||
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dl  160 (314)
T cd05099          81 INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDL  160 (314)
T ss_pred             eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccc
Confidence            9 332   111 111       567777644210             234788888999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-  213 (260)
                      ||+|||++.++.+||+|||+++...........  ..+  ...    ..+.+|+..  ..++.++|+||+|++++++++ 
T Consensus       161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~--~~~--~~~----~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~  232 (314)
T cd05099         161 AARNVLVTEDNVMKIADFGLARGVHDIDYYKKT--SNG--RLP----VKWMAPEALFDRVYTHQSDVWSFGILMWEIFTL  232 (314)
T ss_pred             cceeEEEcCCCcEEEcccccccccccccccccc--ccC--CCC----ccccCHHHHccCCcCccchhhHHHHHHHHHHhC
Confidence            999999999999999999999765432110000  000  000    112233332  457889999999999999987 


Q ss_pred             cccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         214 EDKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       214 ~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      |..|+.                          ..+++.+|+...+.. |+++.++++.+.++
T Consensus       233 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-Rps~~~ll~~l~~~  293 (314)
T cd05099         233 GGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQ-RPTFKQLVEALDKV  293 (314)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHH
Confidence            544422                          345556666644444 45666666666544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=5e-28  Score=197.92  Aligned_cols=183  Identities=20%  Similarity=0.230  Sum_probs=134.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      .+|+..+.||.|+||.||+|.+  ++..||+|.+.....       ......+.+|+.+++++.|+|++     +.+...
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-------EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTK   76 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence            4577889999999999999997  488999998643211       11235788999999999999999     222222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++..+    .+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~  152 (277)
T cd06640          77 LWIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             EEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceecc
Confidence            222       4555655433    36778888899999999999999999999999999999999999999999986654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........          ......+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       153 ~~~~~~~~----------~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  202 (277)
T cd06640         153 DTQIKRNT----------FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNS  202 (277)
T ss_pred             CCcccccc----------ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCC
Confidence            32211100          0011112233322  457889999999999999999987753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.95  E-value=1.3e-27  Score=193.25  Aligned_cols=219  Identities=16%  Similarity=0.214  Sum_probs=152.5

Q ss_pred             eeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh--
Q psy7935          22 ECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI--   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~--   91 (260)
                      +.||+|+||.||+|.+.     +.++++|.+......      . ....+.+|++.+..++|+|++ +++.  .....  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~------~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   73 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE------E-ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYL   73 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccch------h-HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEE
Confidence            46899999999999985     789999985432211      1 246788999999999999999 2222  11112  


Q ss_pred             -------hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          92 -------QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        92 -------~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                             ++|.+++.....      ...+++..++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||.+.
T Consensus        74 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~  153 (262)
T cd00192          74 VLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSR  153 (262)
T ss_pred             EEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccc
Confidence                   566666655311      2468999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY-  231 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~-  231 (260)
                      ...........    .....+..+    .+|+..  ..++.++|+||+|++++++++ |..|+.   ..++.+.+..+. 
T Consensus       154 ~~~~~~~~~~~----~~~~~~~~y----~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~  225 (262)
T cd00192         154 DVYDDDYYRKK----TGGKLPIRW----MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR  225 (262)
T ss_pred             ccccccccccc----cCCCcCccc----cCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            66543211000    001111112    222222  357889999999999999998 466654   344444444322 


Q ss_pred             ---cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 ---RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ---~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         +...++.+.+++.+|...++.+|.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rp  252 (262)
T cd00192         226 LPKPEYCPDELYELMLSCWQLDPEDRP  252 (262)
T ss_pred             CCCCccCChHHHHHHHHHccCCcccCc
Confidence               222345667777777777777775

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=4.9e-28  Score=204.71  Aligned_cols=188  Identities=19%  Similarity=0.238  Sum_probs=134.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .+.|+..+.||+|+||.||+|++  +|+.||+|.+... ....     .....+.+|+.++++++|+|++ +.+.   ..
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~-----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRP-FQNV-----THAKRAYRELVLMKLVNHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcc-ccCh-----hHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence            45688899999999999999998  4899999975322 1111     1234577899999999999998 3321   11


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ...+.+++|+.+...   ...++...+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++...
T Consensus        89 ~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  168 (353)
T cd07850          89 SLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  168 (353)
T ss_pred             CccccCcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence                 112345555543211   122788888899999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       169 ~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~  218 (353)
T cd07850         169 GTSFMMT-----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP  218 (353)
T ss_pred             CCCCCCC-----------CCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence            4321110           00111112233322  457889999999999999999987654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=8.2e-28  Score=196.98  Aligned_cols=225  Identities=16%  Similarity=0.141  Sum_probs=152.5

Q ss_pred             cccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      +.++..++||+|+||.||++..       .+..+++|.+....        ......+.+|+++++.++|+||+ +.+  
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--------ESARQDFQREAELLTVLQHQHIVRFYGVC   76 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--------HHHHHHHHHHHHHHhcCCCCCCceEEEEE
Confidence            4577789999999999999974       25678888743211        11245789999999999999998 222  


Q ss_pred             --CCchhh-------hhHHHhhccCcc------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNI------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS  144 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~  144 (260)
                        ....++       ++|.+++.....            ...+++..+..++.|++.|++|||++|++||||||+|||++
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~  156 (280)
T cd05092          77 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG  156 (280)
T ss_pred             ecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence              222111       456555543211            12478888999999999999999999999999999999999


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc--
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--  219 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--  219 (260)
                      .++.+||+|||++............    +...    ....+.+|+..  ..++.++|+||||++++++++ |..|+.  
T Consensus       157 ~~~~~kL~dfg~~~~~~~~~~~~~~----~~~~----~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  228 (280)
T cd05092         157 QGLVVKIGDFGMSRDIYSTDYYRVG----GRTM----LPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQL  228 (280)
T ss_pred             CCCCEEECCCCceeEcCCCceeecC----CCcc----ccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccC
Confidence            9999999999998755332111000    0000    01112233322  457889999999999999998 666653  


Q ss_pred             -HHHHHHHHHhhcc----ccCCccHHHHHHHHHHhccccccc
Q psy7935         220 -FRDMFNWILSSYR----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       220 -~~~~~~~~~~~~~----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+..+....+..    ...++.+.+++.+|...++..|..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~  270 (280)
T cd05092         229 SNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMV  270 (280)
T ss_pred             CHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence             3334444433322    223466778888888777777754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.95  E-value=1.1e-27  Score=193.40  Aligned_cols=219  Identities=16%  Similarity=0.234  Sum_probs=149.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cchh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKSA   90 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~~   90 (260)
                      .++..+.||+|+||.||++.+. +..+++|.+......         ...+.+|++++++++|||++ +++.    ...+
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS---------EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPIC   75 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC---------HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceE
Confidence            4677899999999999999985 788999975432211         24588899999999999998 3221    1111


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++...  ...+++..+..++.|++.|++|||+++++|+||||+||+++.++.++|+|||++......
T Consensus        76 ~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~  153 (256)
T cd05112          76 LVFEFMEHGCLSDYLRAQ--RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD  153 (256)
T ss_pred             EEEEcCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence            1       4455555432  124678888999999999999999999999999999999999999999999998654322


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----c
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----R  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~  233 (260)
                      ......     ....+..    +.+|+..  ..++.++|+||+|++++++++ |..|+.   ..+..+....+..    .
T Consensus       154 ~~~~~~-----~~~~~~~----~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  224 (256)
T cd05112         154 QYTSST-----GTKFPVK----WSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPR  224 (256)
T ss_pred             cccccC-----CCccchh----hcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCC
Confidence            111000     0000111    1223222  457788999999999999987 666654   3344444433222    1


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..+..+.+++.+|...++.+|.
T Consensus       225 ~~~~~~~~l~~~~l~~~p~~Rp  246 (256)
T cd05112         225 LASQSVYELMQHCWKERPEDRP  246 (256)
T ss_pred             CCCHHHHHHHHHHcccChhhCC
Confidence            1244566777777777777664

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=5.8e-28  Score=199.11  Aligned_cols=219  Identities=15%  Similarity=0.190  Sum_probs=148.5

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+++.....||+|+||.||++.+  ++..||||.+....        ....+.+.+|+.+++.++|+|++     +....
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~   92 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--------QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD   92 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--------HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC
Confidence            35567788999999999999997  48899999753221        12245688999999999999998     22222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++..    ..+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++...
T Consensus        93 ~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658          93 ELWVVMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             eEEEEEeCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence            2222       344444432    23778889999999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR--  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--  233 (260)
                      ........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.+.......+.  
T Consensus       169 ~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (292)
T cd06658         169 SKEVPKRK----------SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV  238 (292)
T ss_pred             ccccccCc----------eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc
Confidence            32211110          01111122233332  356789999999999999999988765   22222222221111  


Q ss_pred             ----cCCccHHHHHHHHHHhcccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~  255 (260)
                          ..+..+.+++.+|...++..|.
T Consensus       239 ~~~~~~~~~~~~li~~~l~~~P~~Rp  264 (292)
T cd06658         239 KDSHKVSSVLRGFLDLMLVREPSQRA  264 (292)
T ss_pred             ccccccCHHHHHHHHHHccCChhHCc
Confidence                1133456666666666666664

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=6.3e-28  Score=197.14  Aligned_cols=175  Identities=13%  Similarity=0.157  Sum_probs=119.2

Q ss_pred             eeccCCceeEEEEEEc--------------------------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          23 CFKQGAEGRIFKTEYL--------------------------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~--------------------------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      .||+|+||.||+|...                          ...|++|++...        .......+.+|+.+++.+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~~~~~~~~l   73 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--------HRDIALAFFETASLMSQV   73 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--------HHHHHHHHHHHHHHHhcC
Confidence            5899999999999741                          135788864321        111235688899999999


Q ss_pred             CCCCeE-EeCC--CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          77 RMADIC-LDDV--QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        77 ~h~~i~-~~~~--~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                      +||||+ +++.  .....+.+++|+.+..+       ...+++..+..++.|++.||+|||+++|+||||||+|||++..
T Consensus        74 ~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~  153 (274)
T cd05076          74 SHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARL  153 (274)
T ss_pred             CCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEecc
Confidence            999999 3332  11122234444443322       2347788888999999999999999999999999999999864


Q ss_pred             C-------cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeec-ccc
Q psy7935         147 H-------HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVS-TED  215 (260)
Q Consensus       147 ~-------~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~-~~~  215 (260)
                      +       .+|++|||++.........              ....++.+|+..   ..+++++|+||||+++++++ ++.
T Consensus       154 ~~~~~~~~~~kl~d~g~~~~~~~~~~~--------------~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~  219 (274)
T cd05076         154 GLAEGTSPFIKLSDPGVSFTALSREER--------------VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGE  219 (274)
T ss_pred             CcccCccceeeecCCcccccccccccc--------------ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            3       4899999987543222110              011122333333   34788999999999999984 565


Q ss_pred             cccc
Q psy7935         216 KAVD  219 (260)
Q Consensus       216 ~~~~  219 (260)
                      .|+.
T Consensus       220 ~p~~  223 (274)
T cd05076         220 VPLK  223 (274)
T ss_pred             CCcc
Confidence            5543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.95  E-value=1e-27  Score=193.50  Aligned_cols=219  Identities=18%  Similarity=0.240  Sum_probs=152.6

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|+..+.||+|+||.||+|.+.  ++.+++|.+....          ..+.+.+|++++++++|+|++ +.+    ..
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~   71 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----------DLQEIIKEISILKQCDSPYIVKYYGSYFKNT   71 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence            356788899999999999999984  7899999853211          146789999999999999999 322    21


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++...
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~  149 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQL  149 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhc
Confidence            1112       4555555332  235788999999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHHHHHHHH---Hhhc---
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWI---LSSY---  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~---~~~~---  231 (260)
                      ........           ...+...| +|+..  ..++.++|+||+|++++++++|..|+.........   ....   
T Consensus       150 ~~~~~~~~-----------~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd06612         150 TDTMAKRN-----------TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPT  218 (256)
T ss_pred             ccCccccc-----------cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCC
Confidence            43321110           00111122 22222  35678899999999999999998886521111111   1100   


Q ss_pred             ---cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         +...+..+.+++.+|...++..|..
T Consensus       219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps  246 (256)
T cd06612         219 LSDPEKWSPEFNDFVKKCLVKDPEERPS  246 (256)
T ss_pred             CCchhhcCHHHHHHHHHHHhcChhhCcC
Confidence               1112345677888888777777753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0984|consensus

Probab=99.95  E-value=3.7e-28  Score=181.08  Aligned_cols=188  Identities=17%  Similarity=0.233  Sum_probs=137.0

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCCCch
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDVQKS   89 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~~~~   89 (260)
                      ..+.+..++.||+|+||.|-+.++  +|.-.|+|.+.....      .+ ..++.++|+.+..+. ..|.++ |++.-..
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn------~q-~q~r~L~dldi~~r~~~CPf~V~FyGa~~r  116 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN------SQ-EQKRLLMDLDIIMRTVDCPFTVHFYGALFR  116 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC------hH-HHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence            344577789999999999888887  699999998654321      11 135678889877665 689888 7664221


Q ss_pred             h--h--------hhHHHhhcc-CcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          90 A--I--------QTLISNLDS-QNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        90 ~--~--------~~l~~~l~~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      .  +        .+|..|-.. ...+...++..+-+|+..+..||.|||++ .++|||+||+||||+.+|++|+||||++
T Consensus       117 egdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIs  196 (282)
T KOG0984|consen  117 EGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGIS  196 (282)
T ss_pred             cccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccc
Confidence            1  1        222222111 01145699999999999999999999998 8999999999999999999999999999


Q ss_pred             cccccccc----ccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTED----KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....++-.    .+...|.+++.+.           ++.  ..|+-++|+||+|+.++|+.+++.|.+
T Consensus       197 G~L~dSiAkt~daGCkpYmaPEri~-----------~e~n~~gY~vksDvWSLGItmiElA~lr~PY~  253 (282)
T KOG0984|consen  197 GYLVDSIAKTMDAGCKPYMAPERIN-----------PELNQKGYSVKSDVWSLGITMIEMAILRFPYE  253 (282)
T ss_pred             eeehhhhHHHHhcCCCccCChhhcC-----------cccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence            76655432    2222333332222           222  468999999999999999999999987

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1e-27  Score=194.78  Aligned_cols=190  Identities=17%  Similarity=0.224  Sum_probs=135.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~   89 (260)
                      .|++.+.||+|+||.||+|++  +++.+++|.+...... .  ........+.+|++++++++|+|++ +.    +....
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   79 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS-Q--ETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEK   79 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc-c--hhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCC
Confidence            467789999999999999997  4889999975432111 1  1111245788999999999999999 22    22221


Q ss_pred             hh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          90 AI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+         ++|.+++...   ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++...
T Consensus        80 ~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653          80 KLSIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             EEEEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            12         4455555432   24678888899999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .........       .....+...+.+|+..  ...+.++|+||+|++++++.+|..|+.
T Consensus       157 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  210 (264)
T cd06653         157 QTICMSGTG-------IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWA  210 (264)
T ss_pred             ccccccCcc-------ccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence            332111100       0011111122233333  346788999999999999999988876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=1.4e-27  Score=193.62  Aligned_cols=213  Identities=17%  Similarity=0.185  Sum_probs=153.4

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh-----
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI-----   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~-----   91 (260)
                      ||.|++|.||+|+++  ++.+++|++......     .....+.+.+|+.+++.++|||++ +.+    ....++     
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-----ETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcch-----hhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecC
Confidence            689999999999996  899999986543221     111246789999999999999999 322    222222     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                        ++|.+++...   ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++..........  
T Consensus        76 ~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~--  150 (262)
T cd05572          76 LGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTW--  150 (262)
T ss_pred             CCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccc--
Confidence              4565555443   247888899999999999999999999999999999999999999999999987654432110  


Q ss_pred             ccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc-----HHHHHHHHHhh-----ccccCC
Q psy7935         170 LYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-----FRDMFNWILSS-----YRRQNR  236 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~~~  236 (260)
                                ...+.+.| +|+..  ..++.++|+||+|++++++++|..|+.     ..+.......+     .+...+
T Consensus       151 ----------~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (262)
T cd05572         151 ----------TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYID  220 (262)
T ss_pred             ----------cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccC
Confidence                      00111122 22222  456788999999999999999988875     22344444421     122224


Q ss_pred             ccHHHHHHHHHHhccccccc
Q psy7935         237 KQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.+.+++++|...++..|..
T Consensus       221 ~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         221 KAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             HHHHHHHHHHccCChhhCcC
Confidence            67789999998888888876

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG1006|consensus

Probab=99.95  E-value=4.4e-29  Score=192.51  Aligned_cols=204  Identities=20%  Similarity=0.233  Sum_probs=147.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV-   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~-   86 (260)
                      ..+.+.++-++.||.|+||.|++..++  |+..|||++.....     ..  ..++++.|.+...+- +.|||+ |++. 
T Consensus        60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-----~k--eq~rll~e~d~~mks~~cp~IVkfyGa~  132 (361)
T KOG1006|consen   60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-----EK--EQKRLLMEHDTVMKSSNCPNIVKFYGAL  132 (361)
T ss_pred             ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-----hH--HHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence            344555788999999999999999984  99999998643321     11  246788899876655 689999 5443 


Q ss_pred             ---Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEe
Q psy7935          87 ---QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        87 ---~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                         ..-.+         -.|+.++.... ...+++..+-.|+--++.||.||... .|+|||+||+|||++..|.+||||
T Consensus       133 F~EGdcWiCMELMd~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCD  211 (361)
T KOG1006|consen  133 FSEGDCWICMELMDISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCD  211 (361)
T ss_pred             hcCCceeeeHHHHhhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeec
Confidence               11111         22333332222 34588888999999999999999865 899999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc-HHHHHHHHHhh
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD-FRDMFNWILSS  230 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~~  230 (260)
                      ||++.....+-....|       .++-.+++|+.-.+.-..++-++|+||+|++++|+.||+.|.. +.++++++..-
T Consensus       212 FGIcGqLv~SiAkT~d-------aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~V  282 (361)
T KOG1006|consen  212 FGICGQLVDSIAKTVD-------AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQV  282 (361)
T ss_pred             ccchHhHHHHHHhhhc-------cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHH
Confidence            9999766554322222       2233333444333333568899999999999999999999988 77777776653

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-27  Score=195.40  Aligned_cols=185  Identities=18%  Similarity=0.215  Sum_probs=132.7

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |++.+.||.|++|.||+|.+  +|..|++|++........      ....+.+|+++++.++|+|++     +.+....+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG------VPSTAIREISLLKELNHPNIVRLLDVVHSENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc------chhHHHHHHHHHHhcCCCCccCHhheeccCCeEE
Confidence            46688999999999999998  489999998654332111      124577899999999999999     22222222


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++.... ...+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++.......
T Consensus        75 iv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          75 LVFEFLDLDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             EEEeccCcCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence            2      34455544332 2357899999999999999999999999999999999999999999999999986543221


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....          .......+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       154 ~~~~----------~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  201 (283)
T cd07835         154 RTYT----------HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP  201 (283)
T ss_pred             cccC----------ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            1100          00011112223322   235778999999999999999987754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=1.6e-27  Score=196.87  Aligned_cols=185  Identities=20%  Similarity=0.203  Sum_probs=131.8

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |+..+.||+|++|.||+|.+  ++++|++|.+.........   ......+..|++++++++|+|++     +.+....+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK---DGINFTALREIKLLQELKHPNIIGLLDVFGHKSNIN   78 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccccc---chhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEE
Confidence            56678999999999999998  4889999986544322100   11134577899999999999999     22211112


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++....  ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus        79 lv~e~~~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  156 (298)
T cd07841          79 LVFEFMETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN  156 (298)
T ss_pred             EEEcccCCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence            2      44555554321  258888999999999999999999999999999999999999999999999997664432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      .....      ...+..    +.+|+..   ..++.++|+||+|++++++++|..+
T Consensus       157 ~~~~~------~~~~~~----y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~  202 (298)
T cd07841         157 RKMTH------QVVTRW----YRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPF  202 (298)
T ss_pred             ccccc------ccccee----eeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcc
Confidence            11100      011111    2222222   3467889999999999999999443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=6e-28  Score=199.48  Aligned_cols=185  Identities=17%  Similarity=0.251  Sum_probs=132.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      ..++....||+|+||.||++.+  .++.|++|.+..+..        ...+.+.+|+.++..+.|||++ +++.  ....
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~   92 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--------QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEE   92 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--------chHHHHHHHHHHHHhCCCCchhhhhhheeeCCe
Confidence            4456677899999999999997  488999998643221        1235678899999999999998 2221  1112


Q ss_pred             hhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          91 IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        91 ~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      .+.+++|+.+..+     ...+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++........
T Consensus        93 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~  172 (297)
T cd06659          93 LWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  172 (297)
T ss_pred             EEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence            2234444443322     23478888999999999999999999999999999999999999999999999865433211


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...          . ..+...| +|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       173 ~~~----------~-~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~  218 (297)
T cd06659         173 KRK----------S-LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF  218 (297)
T ss_pred             ccc----------c-eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            110          0 1111222 23322  346789999999999999999987753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=1.8e-27  Score=191.65  Aligned_cols=215  Identities=19%  Similarity=0.218  Sum_probs=143.1

Q ss_pred             eeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchhh----
Q psy7935          22 ECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSAI----   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~~----   91 (260)
                      +.||+|+||.||+|... ++.+|+|.+....   +    ......+.+|++++++++|||++ +.    .....++    
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~---~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL---P----QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcC---C----HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEEC
Confidence            36899999999999874 7789999743221   1    11234688999999999999998 22    2222212    


Q ss_pred             ---hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          92 ---QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        92 ---~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                         ++|.+++...  ...+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...........
T Consensus        74 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  151 (250)
T cd05085          74 VPGGDFLSFLRKK--KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSS  151 (250)
T ss_pred             CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccC
Confidence               4555555432  23467888899999999999999999999999999999999999999999999865332211100


Q ss_pred             cccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----ccCCc
Q psy7935         169 DLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----RQNRK  237 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~~~~~  237 (260)
                      .          ...+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.   .......+.....    ...+.
T Consensus       152 ~----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (250)
T cd05085         152 G----------LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPD  221 (250)
T ss_pred             C----------CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCH
Confidence            0          001111 2233322  446788999999999999988 766653   2233333332221    12235


Q ss_pred             cHHHHHHHHHHhcccccc
Q psy7935         238 QFETVMKTFAEVELRGRK  255 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~  255 (260)
                      .+.+++.+|...++..|.
T Consensus       222 ~~~~li~~~l~~~p~~Rp  239 (250)
T cd05085         222 DVYKVMQRCWDYKPENRP  239 (250)
T ss_pred             HHHHHHHHHcccCcccCC
Confidence            556666666666666663

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.95  E-value=9.4e-28  Score=197.06  Aligned_cols=224  Identities=17%  Similarity=0.219  Sum_probs=150.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--   86 (260)
                      ...+.|++.+.||+|+||.||+|.+  +++.+++|++....    .     ....+.+|+.+++.+ +|+|++ +++.  
T Consensus        15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638          15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----D-----IDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----c-----hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            3445688999999999999999998  47899999753211    1     124577899999998 699999 3321  


Q ss_pred             -----CchhhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          87 -----QKSAIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        87 -----~~~~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                           .....+.+++|+.+..+          ...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEE
Confidence                 11222233443333221          235778888999999999999999999999999999999999999999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeeccccccccHH---
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVDFR---  221 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~~~---  221 (260)
                      +|||++.......... +     ....+..    +.+|+..       ..++.++|+||+|++++++.+|..|+...   
T Consensus       166 ~dfg~~~~~~~~~~~~-~-----~~~~~~~----y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~  235 (286)
T cd06638         166 VDFGVSAQLTSTRLRR-N-----TSVGTPF----WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM  235 (286)
T ss_pred             ccCCceeecccCCCcc-c-----cccCCCc----ccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence            9999987653321110 0     0011111    2233222       34678999999999999999998876521   


Q ss_pred             HHHHHHHhhc------cccCCccHHHHHHHHHHhcccccc
Q psy7935         222 DMFNWILSSY------RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       222 ~~~~~~~~~~------~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..........      +...+..+.+++.+|...++..|.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  275 (286)
T cd06638         236 RALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRP  275 (286)
T ss_pred             HHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCC
Confidence            1111111111      111133577788888877777774

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=1.1e-27  Score=195.16  Aligned_cols=227  Identities=15%  Similarity=0.194  Sum_probs=152.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCch--hhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPK--LDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~--~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +...+.||+|+||.||+|..  +|+.+|+|.+.........  .......+.+.+|+.++++++|+|++ +.+.  ....
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            44578999999999999987  4889999986432221111  11111235688899999999999998 2221  1222


Q ss_pred             h---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          91 I---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        91 ~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      +         ++|.+++...   ..++...+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++....
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence            2         3444444332   257888888899999999999999999999999999999999999999999986543


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc----ccccccceeEeecceeeeeccccccccHHHHHHHHHhhc-----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY-----  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----  231 (260)
                      .......+.         ...+...| +|+..    ..++.++|+||+|++++++++|..|+...+....+....     
T Consensus       160 ~~~~~~~~~---------~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  230 (272)
T cd06629         160 DIYDNDQNM---------SMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSA  230 (272)
T ss_pred             ccccccccc---------cccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccC
Confidence            321111000         00111112 22222    246788999999999999999988876322222221110     


Q ss_pred             -------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 -------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 -------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ....+..+.+++.+|...++..|..
T Consensus       231 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  262 (272)
T cd06629         231 PPIPPDVSMNLSPVALDFLNACFTINPDNRPT  262 (272)
T ss_pred             CcCCccccccCCHHHHHHHHHHhcCChhhCCC
Confidence                   0112456788888888888888854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.95  E-value=1.7e-27  Score=197.56  Aligned_cols=189  Identities=19%  Similarity=0.244  Sum_probs=132.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc-
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK-   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~-   88 (260)
                      .|+..+.||+|+||.||+|.+  +++.||+|.+....... .     ....+.+|+.++++++||||+ +.+    ... 
T Consensus        13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   86 (310)
T cd07865          13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-G-----FPITALREIKILQLLKHENVVNLIEICRTKATP   86 (310)
T ss_pred             heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-C-----chhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence            478899999999999999998  48899999864332111 1     123466899999999999998 322    111 


Q ss_pred             -----h--hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          89 -----S--AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        89 -----~--~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                           .  ++      +++.+++...  ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.+||+|||
T Consensus        87 ~~~~~~~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg  164 (310)
T cd07865          87 YNRYKGSFYLVFEFCEHDLAGLLSNK--NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG  164 (310)
T ss_pred             ccCCCceEEEEEcCCCcCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCC
Confidence                 1  11      3333333322  2247889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++..............      ........+.+|+..   ..++.++|+||+|+++++++++..|+.
T Consensus       165 ~~~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~  225 (310)
T cd07865         165 LARAFSLSKNSKPNRY------TNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQ  225 (310)
T ss_pred             CcccccCCcccCCCCc------cCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCC
Confidence            9976644322111100      011111112233322   235678999999999999999876654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=1.3e-27  Score=195.60  Aligned_cols=213  Identities=14%  Similarity=0.158  Sum_probs=143.1

Q ss_pred             eeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHH---hhhcccCCCCeE-Ee----CCCchhh-
Q psy7935          23 CFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEI---RGLMKCRMADIC-LD----DVQKSAI-   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~~~h~~i~-~~----~~~~~~~-   91 (260)
                      .||+|+||.||++.+  +++.||+|.+..+.......     ...+..|.   ..++...||+++ +.    +....++ 
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   75 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-----ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   75 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh-----HHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEE
Confidence            379999999999987  48899999876543322111     11223333   344455789998 22    2222222 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                            ++|.+++..   ...+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++........
T Consensus        76 ~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~  152 (278)
T cd05606          76 LDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  152 (278)
T ss_pred             EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC
Confidence                  344444432   23588999999999999999999999999999999999999999999999999865432211


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeeccccccccH------HHHHHHHHh---hcc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDF------RDMFNWILS---SYR  232 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~------~~~~~~~~~---~~~  232 (260)
                      .            .. .+...| +|+..   ..++.++|+||+|++++++++|..|+..      .........   ..+
T Consensus       153 ~------------~~-~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  219 (278)
T cd05606         153 H------------AS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP  219 (278)
T ss_pred             c------------Cc-CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCC
Confidence            1            00 112223 33333   2467889999999999999999988751      122111111   112


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       220 ~~~s~~~~~li~~~l~~~p~~R~~  243 (278)
T cd05606         220 DSFSPELRSLLEGLLQRDVNRRLG  243 (278)
T ss_pred             CcCCHHHHHHHHHHhhcCHHhccC
Confidence            223567889999999888888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.95  E-value=2.5e-27  Score=199.81  Aligned_cols=181  Identities=22%  Similarity=0.260  Sum_probs=131.5

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC-----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ-----   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~-----   87 (260)
                      +.|++.+.||+|+||.||+|.+  +++.||+|++....      ......+.+.+|++++++++|+||+ +.+..     
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~   90 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS   90 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc------hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence            4588899999999999999987  48899999754221      1111235678899999999999998 32211     


Q ss_pred             -----chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 -----KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 -----~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                           ..++      ++|.+++...    .+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||+
T Consensus        91 ~~~~~~~~lv~~~~~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~  166 (345)
T cd07877          91 LEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL  166 (345)
T ss_pred             ccccccEEEEehhcccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccc
Confidence                 0111      3344444332    478888999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +.........             ..+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       167 ~~~~~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~  219 (345)
T cd07877         167 ARHTDDEMTG-------------YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  219 (345)
T ss_pred             cccccccccc-------------cccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            8654322110             0011112223322   346788999999999999999987764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=1.8e-27  Score=193.83  Aligned_cols=187  Identities=17%  Similarity=0.155  Sum_probs=123.9

Q ss_pred             eeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh-
Q psy7935          22 ECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI-   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~-   91 (260)
                      +.||+|+||.||+|.+.    +..+++|.+.....       ......+.+|+.++++++|||++ +++    ....++ 
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   73 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-------VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLV   73 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEE
Confidence            36899999999999863    45788887432211       11234688899999999999999 322    222222 


Q ss_pred             ------hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          92 ------QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 ------~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                            ++|.+++.....  ....++..+..++.|++.|++|||+++++|+||||+||+++.++.++|+|||++......
T Consensus        74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~  153 (269)
T cd05087          74 MEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE  153 (269)
T ss_pred             EECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence                  555555543221  123456677789999999999999999999999999999999999999999998643322


Q ss_pred             ccccccccccccceeeeeeeeeecCccc-----cccccccceeEeecceeeeecc-cccccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGT-----LQSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      ......    .....+..+.+|+.....     ...++.++|+||+|++++++++ |..|+.
T Consensus       154 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~  211 (269)
T cd05087         154 DYYVTP----DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYR  211 (269)
T ss_pred             ceeecC----CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCC
Confidence            110000    000011112222211110     0235789999999999999986 876654

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.95  E-value=2.2e-27  Score=195.77  Aligned_cols=186  Identities=17%  Similarity=0.238  Sum_probs=130.2

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|+..+.||+|++|.||+|++.  |++|++|.+.......      .....+.+|++++++++|+|++ +.+    ....
T Consensus         3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   76 (294)
T PLN00009          3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE------GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRL   76 (294)
T ss_pred             ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc------cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeE
Confidence            4778899999999999999984  7899999754322111      1134678899999999999999 222    2222


Q ss_pred             hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccc
Q psy7935          90 AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~  162 (260)
                      ++      +++.+++.... ....++..+..++.|++.||+|||+++++|+||+|+||+++. ++.+||+|||++.....
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~  155 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI  155 (294)
T ss_pred             EEEEecccccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence            22      33444433222 223577888889999999999999999999999999999985 56899999999865433


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....+.      .    .+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~~~~------~----~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~  205 (294)
T PLN00009        156 PVRTFTH------E----VVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP  205 (294)
T ss_pred             Ccccccc------C----ceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            2111100      0    111112233322   346788999999999999999987764

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=1.1e-27  Score=195.11  Aligned_cols=186  Identities=16%  Similarity=0.150  Sum_probs=123.7

Q ss_pred             eeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh--
Q psy7935          23 CFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI--   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~--   91 (260)
                      .||+|+||.||+|...    ...+++|.+....       .......+.+|+.+++.++|+||+ +++    ....++  
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~   74 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-------TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVL   74 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccC-------ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEE
Confidence            5899999999999752    3467777632211       111235688899999999999999 332    222222  


Q ss_pred             -----hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          92 -----QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 -----~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                           ++|.+++.....  ....++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  154 (269)
T cd05042          75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPED  154 (269)
T ss_pred             EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccch
Confidence                 567676654321  2234677788899999999999999999999999999999999999999999986432221


Q ss_pred             cccccccccccceeeeeeeeeecCcc-----ccccccccceeEeecceeeeecc-cccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKG-----TLQSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      .....    .....++.+.+|+....     ....++.++|+||+|++++++++ +..|+.
T Consensus       155 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  211 (269)
T cd05042         155 YYITK----DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP  211 (269)
T ss_pred             heecc----CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence            10000    00001111222221100     11346789999999999999998 555543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=6.3e-28  Score=198.04  Aligned_cols=222  Identities=16%  Similarity=0.236  Sum_probs=154.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|++++.||+|+||.||++.+.  ++.+|+|++.....       ......+.+|+++++.++|||++ +.+.  ....
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   77 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-------SSVRKQILRELQIMHECRSPYIVSFYGAFLNENN   77 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-------chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCE
Confidence            45788999999999999999984  88999997543211       11246788999999999999999 2222  1122


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      .+.+++|+.+..+      ...+++..+..++.+++.||.|||+ ++++|+||+|+||+++.++.++|+|||++......
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          78 ICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence            2234444443322      2347888899999999999999997 69999999999999999999999999998654222


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH--------------HHHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF--------------RDMFNWI  227 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~--------------~~~~~~~  227 (260)
                      ...            ...+...+.+|+..  ..++.++|+||+|++++++++|..|++.              .+....+
T Consensus       158 ~~~------------~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd06620         158 IAD------------TFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI  225 (284)
T ss_pred             ccC------------ccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH
Confidence            110            01111122233332  4577899999999999999999888751              1233333


Q ss_pred             Hhhccc-----cCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYRR-----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~~-----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....+.     ..+..+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt  259 (284)
T cd06620         226 VQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT  259 (284)
T ss_pred             hhccCCCCCchhcCHHHHHHHHHHhcCCcccCcC
Confidence            332211     12346778888888888888753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.95  E-value=3.4e-27  Score=190.62  Aligned_cols=221  Identities=15%  Similarity=0.145  Sum_probs=152.5

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~~   90 (260)
                      |+..+.||+|++|.||+|..  .+++|++|.+........   .....+.+.+|+.++++++|+|++ +.+.    ...+
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   78 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT---GQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLY   78 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEcccccc---chHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEE
Confidence            45568899999999999998  488999998654332211   112245788999999999999999 3322    2222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++...   ..+++..+..++.|++.|++|||++|++|+||+|+||+++.++.+||+|||++......
T Consensus        79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~  155 (258)
T cd06632          79 IFLELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF  155 (258)
T ss_pred             EEEEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence            2       4555555433   24778888889999999999999999999999999999999999999999998665332


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--c-cccccceeEeecceeeeeccccccccHH---HHHHHHHh-----hcc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q-SYNHHLVMIDFGLSQIKVSTEDKAVDFR---DMFNWILS-----SYR  232 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~  232 (260)
                      ....       ....+..+.    +|+..  . .++.++|+||+|++++++++|..|+...   +.......     ..+
T Consensus       156 ~~~~-------~~~~~~~y~----~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  224 (258)
T cd06632         156 SFAK-------SFKGSPYWM----APEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIP  224 (258)
T ss_pred             cccc-------ccCCCccee----CHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcC
Confidence            2110       001111111    22222  2 3678899999999999999999887521   11111111     112


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...++.+.+++.+|...++..|.
T Consensus       225 ~~~~~~~~~li~~~l~~~p~~Rp  247 (258)
T cd06632         225 DHLSDEAKDFILKCLQRDPSLRP  247 (258)
T ss_pred             CCcCHHHHHHHHHHhhcCcccCc
Confidence            22346678888888888888885

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=6.4e-28  Score=202.74  Aligned_cols=194  Identities=21%  Similarity=0.252  Sum_probs=134.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV----   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~----   86 (260)
                      .+.|++.+.||+|+||.||+|.+  +|+.+++|.+... .....     ....+.+|+.++.++ +|+||+ +++.    
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~-~~~~~-----~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~   79 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDA-FRNAT-----DAQRTFREIMFLQELGDHPNIVKLLNVIKAE   79 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccc-cCcch-----hhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence            35578889999999999999998  4789999986432 11111     134577899999999 999999 3332    


Q ss_pred             CchhhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          87 QKSAIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .....+.+++|+.+...    ...+.+.....++.|++.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        80 ~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          80 NDKDIYLVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             CCceEEEEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence            22222334444432100    11467778888999999999999999999999999999999999999999999876543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......     .......+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       160 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~  214 (337)
T cd07852         160 LEENPEN-----PVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP  214 (337)
T ss_pred             ccccccC-----cchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence            3211000     000111122223333333   346788999999999999999987653

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.95  E-value=6.5e-28  Score=197.25  Aligned_cols=214  Identities=13%  Similarity=0.144  Sum_probs=146.4

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchhh-----
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSAI-----   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~~-----   91 (260)
                      ||+|+||.||+|.+.  |+.+++|.+......     .......+.+|++++++++|||++ +.    .....++     
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK-----KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh-----hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecC
Confidence            689999999999874  889999986543221     112244577899999999999999 22    2222222     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                        ++|.+++.... ...+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++............
T Consensus        76 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  154 (277)
T cd05577          76 NGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGR  154 (277)
T ss_pred             CCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccc
Confidence              44555554322 235888999999999999999999999999999999999999999999999998654321111000


Q ss_pred             ccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHh---hccccCC
Q psy7935         170 LYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILS---SYRRQNR  236 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~  236 (260)
                                  .+...| +|+..  ..++.++|+||+|++++++++|..|+..       ..+......   ..+...+
T Consensus       155 ------------~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (277)
T cd05577         155 ------------AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFS  222 (277)
T ss_pred             ------------cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCC
Confidence                        011112 22222  3467889999999999999999888641       122221111   1122235


Q ss_pred             ccHHHHHHHHHHhcccccc
Q psy7935         237 KQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~  255 (260)
                      +.+.+++.+|...++..|.
T Consensus       223 ~~~~~li~~~l~~~p~~R~  241 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRL  241 (277)
T ss_pred             HHHHHHHHHHccCChhHcc
Confidence            6677888888777777776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.95  E-value=2.4e-27  Score=199.04  Aligned_cols=221  Identities=16%  Similarity=0.172  Sum_probs=149.5

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ...+|++.+.||+|+||.||+|++.         +..||+|.+.... .      ......+.+|+++++++ +||||+ 
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~------~~~~~~~~~E~~~l~~l~~h~~iv~   82 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-T------DKDLSDLVSEMEMMKMIGKHKNIIN   82 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-C------HHHHHHHHHHHHHHHhhcCCCCeee
Confidence            3456888999999999999999852         2368999743211 1      11235688999999999 799999 


Q ss_pred             EeC---CCc-hhh-------hhHHHhhccCc-------------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy7935          83 LDD---VQK-SAI-------QTLISNLDSQN-------------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT  138 (260)
Q Consensus        83 ~~~---~~~-~~~-------~~l~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp  138 (260)
                      +++   ... .++       ++|.+++....             ....++...+..++.|++.||+|||++|++||||||
T Consensus        83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp  162 (334)
T cd05100          83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA  162 (334)
T ss_pred             eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence            222   111 111       56777765421             123467788888999999999999999999999999


Q ss_pred             CcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cc
Q psy7935         139 SNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-ED  215 (260)
Q Consensus       139 ~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~  215 (260)
                      +|||++.++.+||+|||+++............        .......+.+|+..  ..++.++|+||+|++++++++ +.
T Consensus       163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  234 (334)
T cd05100         163 RNVLVTEDNVMKIADFGLARDVHNIDYYKKTT--------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGG  234 (334)
T ss_pred             ceEEEcCCCcEEECCcccceeccccccccccc--------CCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCC
Confidence            99999999999999999987553321110000        00000112333333  457788999999999999987 54


Q ss_pred             cccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         216 KAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       216 ~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      .|+.                          +.+++.+|+...+.. |+++.++++.|.++.
T Consensus       235 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~-Rps~~ell~~l~~~~  294 (334)
T cd05100         235 SPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQ-RPTFKQLVEDLDRVL  294 (334)
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhh-CcCHHHHHHHHHHHh
Confidence            4321                          334566666645554 567777777776554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=4.1e-27  Score=189.62  Aligned_cols=216  Identities=19%  Similarity=0.195  Sum_probs=145.0

Q ss_pred             eeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchhh----
Q psy7935          22 ECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSAI----   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~~----   91 (260)
                      +.||+|+||.||++.+. ++.|++|.+.....     .  .....+.+|++++++++|+||+ +    .+....++    
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~-----~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP-----P--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCC-----H--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEc
Confidence            46899999999999985 89999997533211     1  1246789999999999999999 2    22222222    


Q ss_pred             ---hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          92 ---QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        92 ---~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                         ++|.+++...  ...++...+..++.+++.||+|||+++++||||+|+||+++.++.++|+|||++...........
T Consensus        74 ~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~  151 (251)
T cd05041          74 VPGGSLLTFLRKK--KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS  151 (251)
T ss_pred             CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec
Confidence               4455555332  22477888899999999999999999999999999999999999999999999875542111100


Q ss_pred             cccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhc----cccCCc
Q psy7935         169 DLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSY----RRQNRK  237 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~----~~~~~~  237 (260)
                      +         ....... +.+|+..  ..++.++|+||+|++++++++ +..|+.   .......+....    +...+.
T Consensus       152 ~---------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (251)
T cd05041         152 D---------GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPE  222 (251)
T ss_pred             c---------ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCH
Confidence            0         0000011 2223322  457789999999999999998 655543   223333332211    112234


Q ss_pred             cHHHHHHHHHHhcccccc
Q psy7935         238 QFETVMKTFAEVELRGRK  255 (260)
Q Consensus       238 ~~~~il~~l~~~~~~~r~  255 (260)
                      .+.+++.+|...++..|.
T Consensus       223 ~~~~li~~~l~~~p~~Rp  240 (251)
T cd05041         223 EIYRLMLQCWAYDPENRP  240 (251)
T ss_pred             HHHHHHHHHhccChhhCc
Confidence            566677777766666664

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.95  E-value=4.5e-27  Score=190.66  Aligned_cols=229  Identities=16%  Similarity=0.173  Sum_probs=154.6

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~   89 (260)
                      +|++.+.||+|+||.||+|.+  .++.+++|.+......      ......+.+|++++++++|+||+ +.+.    ...
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND------PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc------hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEE
Confidence            367789999999999999997  4889999986543221      12346789999999999999998 3332    111


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+       ++|.+++...   ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.+||+|||++.....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~  151 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKN  151 (264)
T ss_pred             EEEEecCCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCC
Confidence            11       4455555432   2478888889999999999999999999999999999999999999999999876644


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccccccccH----HHHHHHHHhhcc----c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSYR----R  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~----~  233 (260)
                      ........  .........+.+|++..... ...+.++|+||+|++++++++|..|+..    .........+..    .
T Consensus       152 ~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  229 (264)
T cd06626         152 NTTTMGEE--VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPD  229 (264)
T ss_pred             CCCccccc--ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCc
Confidence            32211110  00001111111222111111 2367889999999999999999988751    111111121111    1


Q ss_pred             cC--CccHHHHHHHHHHhccccccc
Q psy7935         234 QN--RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~--~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..  ++.+.+++.+|...++..|..
T Consensus       230 ~~~~~~~~~~li~~~l~~~p~~R~~  254 (264)
T cd06626         230 SLQLSPEGKDFLDRCLESDPKKRPT  254 (264)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCC
Confidence            11  455678888888888888753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=5.4e-28  Score=195.75  Aligned_cols=210  Identities=14%  Similarity=0.093  Sum_probs=136.8

Q ss_pred             eeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          22 ECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      +.||+|+||.||+|...         ..++++|.....        .....+.+.+|..+++.+.|||++ +    .+..
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~   72 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--------HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD   72 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch--------hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC
Confidence            46899999999999863         234777764211        112245688899999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc--------EEEE
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH--------LVMI  152 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~--------~kl~  152 (260)
                      ...+       ++|.+++....  ..+++.....++.|++.||+|||++||+||||||+|||++.++.        ++++
T Consensus        73 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~  150 (258)
T cd05078          73 ESIMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS  150 (258)
T ss_pred             CcEEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence            2222       55666665432  25788888889999999999999999999999999999987654        6999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccc-ccccHHHH--HHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTED-KAVDFRDM--FNW  226 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~-~~~~~~~~--~~~  226 (260)
                      |||++.........              .....+.+|+..   ..++.++|+||+|++++++++|. .|....+.  ...
T Consensus       151 d~g~~~~~~~~~~~--------------~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~  216 (258)
T cd05078         151 DPGISITVLPKEIL--------------LERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ  216 (258)
T ss_pred             ccccccccCCchhc--------------cccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH
Confidence            99987654322110              011122334333   23678899999999999999985 33331111  111


Q ss_pred             HHhhc---cccCCccHHHHHHHHHHhcccccc
Q psy7935         227 ILSSY---RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       227 ~~~~~---~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +....   +....+.+.+++.+|...++..|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  248 (258)
T cd05078         217 FYEDRHQLPAPKWTELANLINQCMDYEPDFRP  248 (258)
T ss_pred             HHHccccCCCCCcHHHHHHHHHHhccChhhCC
Confidence            11111   111224456677777666666664

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=1e-27  Score=196.91  Aligned_cols=187  Identities=17%  Similarity=0.247  Sum_probs=133.3

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--chhh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--KSAI   91 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~~~~   91 (260)
                      .|++.+.||+|++|.||+|.+.  ++.|++|.+.....      .......+.+|++++++++|+|++ +.+..  ....
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   75 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED------DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRL   75 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc------cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEE
Confidence            4778899999999999999984  78999997543221      111246788999999999999999 22211  1112


Q ss_pred             hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                      +.+++|+.+..+      ...+++..++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++........
T Consensus        76 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence            223333332211      23478889999999999999999999999999999999999999999999999876544332


Q ss_pred             ccccccccccceeeeeeeeeec-Ccccc--c-cccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCW-SKGTL--Q-SYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....         .. .....| +|+..  . ..+.++|+||+|++++++.+|..|+.
T Consensus       156 ~~~~---------~~-~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~  203 (288)
T cd07833         156 SPLT---------DY-VATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP  203 (288)
T ss_pred             cccc---------Cc-ccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence            1000         00 111222 22222  2 56789999999999999999976654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=5.5e-27  Score=195.49  Aligned_cols=190  Identities=15%  Similarity=0.184  Sum_probs=133.9

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----   84 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----   84 (260)
                      ..+...|+..+.||+|+||.||++++  ++..+++|.+.......     ......+.+|++++++++|+|++ +.    
T Consensus        21 ~~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   95 (317)
T cd06635          21 EDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-----NEKWQDIIKEVKFLQRIKHPNSIEYKGCYL   95 (317)
T ss_pred             CCchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc-----hHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            34445578899999999999999997  48899999754322211     11235688999999999999999 22    


Q ss_pred             CCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          85 DVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        85 ~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      +....++      +++.+.+...  ...+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||++.
T Consensus        96 ~~~~~~lv~e~~~g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~  173 (317)
T cd06635          96 REHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSAS  173 (317)
T ss_pred             eCCeEEEEEeCCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCcc
Confidence            2222222      3333333211  2347888888999999999999999999999999999999999999999999876


Q ss_pred             cccccccccccccccccceeeeeeeeeecCc-cccccccccceeEeecceeeeeccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSK-GTLQSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ........          ..+..+.+|++.. .....++.++|+||+|++++++++|..|+
T Consensus       174 ~~~~~~~~----------~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~  224 (317)
T cd06635         174 IASPANSF----------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL  224 (317)
T ss_pred             ccCCcccc----------cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence            54322110          1111122222110 01145788999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=1.4e-27  Score=194.20  Aligned_cols=228  Identities=18%  Similarity=0.180  Sum_probs=153.7

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |+..+.||+|++|.||++.+  +++.+|+|++......  ........+.+.+|+.++++++|+|++ +.+    .....
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNT--SSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCC--chhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence            56678999999999999997  5889999986432211  111222346788999999999999999 222    22222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeecccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~~~~  162 (260)
                      +       ++|.+++...   ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++ .++|+|||.+.....
T Consensus        80 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~  156 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA  156 (268)
T ss_pred             EEEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence            2       4555555432   3578889999999999999999999999999999999998765 699999999876654


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH------HHHHHHHHhh----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF------RDMFNWILSS----  230 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~------~~~~~~~~~~----  230 (260)
                      ......+ + .+....+.    .+.+|+..  ..++.++|+||+|++++++++|..|+..      ...+.+....    
T Consensus       157 ~~~~~~~-~-~~~~~~~~----~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
T cd06630         157 KGTGAGE-F-QGQLLGTI----AFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAP  230 (268)
T ss_pred             ccccCCc-c-cccccccc----ceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCC
Confidence            3211111 0 00111111    12223322  4567889999999999999999888651      1111111111    


Q ss_pred             -ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       .+...++.+.+++.+|...++..|..
T Consensus       231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~  257 (268)
T cd06630         231 SIPEHLSPGLRDVTLRCLELQPEDRPP  257 (268)
T ss_pred             CCchhhCHHHHHHHHHHcCCCcccCcC
Confidence             11123456678888888888888764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.95  E-value=1.5e-27  Score=195.58  Aligned_cols=227  Identities=17%  Similarity=0.191  Sum_probs=153.2

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCCC--
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDVQ--   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~~--   87 (260)
                      +.+.|++.+.||.|+||.||+|++  .++.+|+|+.....         .....+..|+.++.++ +|+|++ +.+..  
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---------DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            445688899999999999999998  47899999853221         1134577889989888 699999 33221  


Q ss_pred             ------chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          88 ------KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        88 ------~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                            ....         ++|.+++.... ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence                  1122         34555554322 2346788888899999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCc---cccccccccceeEeecceeeeeccccccccHH---HHHHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSK---GTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFR---DMFNW  226 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~  226 (260)
                      |||++...........      ....+..+.+|+...   .....++.++|+||+|++++++++|..|+...   +....
T Consensus       164 dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~  237 (282)
T cd06636         164 DFGVSAQLDRTVGRRN------TFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL  237 (282)
T ss_pred             eCcchhhhhccccCCC------cccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence            9999865432211100      001111122222110   01234677899999999999999998887521   11111


Q ss_pred             HHhhcc-c----cCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSYR-R----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~~-~----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...... .    ..+..+.+++.+|...++..|..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~  272 (282)
T cd06636         238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPS  272 (282)
T ss_pred             HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcC
Confidence            111111 1    12457789999999888888864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG4279|consensus

Probab=99.95  E-value=4.7e-28  Score=208.13  Aligned_cols=178  Identities=18%  Similarity=0.231  Sum_probs=131.7

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh-----
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI-----   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~-----   91 (260)
                      -.||.|+||+||.|++  +...+|||.+..+..+.        -+-+..|+...++++|.||+ +.+.  .++++     
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~--------~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFME  652 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSRE--------VQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFME  652 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchh--------hccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEee
Confidence            3789999999999998  46788999876554321        24578899999999999999 3332  22233     


Q ss_pred             ----hhHHHhhccCccccc--chHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccccc
Q psy7935          92 ----QTLISNLDSQNITRE--NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~--~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~~  164 (260)
                          |+|.+.+...  ..+  -.+..+-.+.+||++||.|||++.|+|||||-+|+|++. .|.+||+|||-++....-+
T Consensus       653 qVPGGSLSsLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin  730 (1226)
T KOG4279|consen  653 QVPGGSLSSLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN  730 (1226)
T ss_pred             cCCCCcHHHHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCC
Confidence                5555555432  123  377888889999999999999999999999999999997 8999999999987654322


Q ss_pred             cccccccccccceeeeeeeeeecCccc----cccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGT----LQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      . .+         .++-++..+++|+.    ...|.+.+|||||||+..||.||+-|+-
T Consensus       731 P-~T---------ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~  779 (1226)
T KOG4279|consen  731 P-CT---------ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV  779 (1226)
T ss_pred             c-cc---------cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence            1 11         11222333333333    3568899999999999999999987754

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=1.8e-27  Score=195.66  Aligned_cols=221  Identities=16%  Similarity=0.178  Sum_probs=149.6

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeC----CCc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDD----VQK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~----~~~   88 (260)
                      .++..+.||+|+||.||++.+.  ++.+|+|.+......       .....+.+|+.++.++. |+||+ +++    ...
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~   77 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-------KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD   77 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-------HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc
Confidence            4566789999999999999984  889999985432211       22456889999999996 99999 322    111


Q ss_pred             hhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          89 SAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        89 ~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ..+         .++..++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++.
T Consensus        78 ~~~~~e~~~~~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~  156 (288)
T cd06616          78 CWICMELMDISLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISG  156 (288)
T ss_pred             EEEEEecccCCHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhH
Confidence            111         23333332221 24588899999999999999999975 99999999999999999999999999986


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeeccccccccH-HHHHHHHHh---
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVDF-RDMFNWILS---  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~-~~~~~~~~~---  229 (260)
                      ...........       ..+.    .+.+|+..     ..++.++|+||+|++++++++|..|+.. ....+.+.+   
T Consensus       157 ~~~~~~~~~~~-------~~~~----~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  225 (288)
T cd06616         157 QLVDSIAKTRD-------AGCR----PYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK  225 (288)
T ss_pred             HhccCCccccc-------cCcc----CccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC
Confidence            54332211100       0111    12223322     2578899999999999999999888752 222222221   


Q ss_pred             hcc-c-------cCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYR-R-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~-~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.+ .       ..++.+.+++++|...++..|..
T Consensus       226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  260 (288)
T cd06616         226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK  260 (288)
T ss_pred             CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC
Confidence            111 1       12344678888888777777753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=2.4e-27  Score=195.48  Aligned_cols=183  Identities=20%  Similarity=0.279  Sum_probs=132.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|++.+.||+|+||.||++..  .++++++|.+....        ....+.+.+|+.++++++|||++ +.+    ..
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~   89 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--------QPKKELIINEILVMRENKHPNIVNYLDSYLVGD   89 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--------chHHHHHHHHHHHHhhcCCCCeeehhheeeeCC
Confidence            35688899999999999999987  47889999853211        11235688999999999999999 332    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...    .++...+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~  165 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (293)
T ss_pred             cEEEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecc
Confidence            2222       4444444332    3677888889999999999999999999999999999999999999999988654


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       166 ~~~~~~~~----------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~  216 (293)
T cd06647         166 TPEQSKRS----------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYL  216 (293)
T ss_pred             cccccccc----------cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            33221110          00111112223322  446789999999999999999987754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=4.9e-27  Score=191.38  Aligned_cols=215  Identities=14%  Similarity=0.201  Sum_probs=138.8

Q ss_pred             eeeccCCceeEEEEEEc--Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC----CCchhh
Q psy7935          22 ECFKQGAEGRIFKTEYL--GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD----VQKSAI   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~----~~~~~~   91 (260)
                      +.||+|+||.||+|++.  +.  .+++|.....  .     .......+.+|++++.++ .|||++ +++    ....++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~-----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l   73 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--A-----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   73 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--C-----CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceE
Confidence            36899999999999974  33  4677764311  1     111235688999999999 799998 322    111111


Q ss_pred             -------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          92 -------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        92 -------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                             ++|.+++.....             ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||
T Consensus        74 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl  153 (270)
T cd05047          74 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  153 (270)
T ss_pred             EEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEE
Confidence                   566666643221             124778888999999999999999999999999999999999999999


Q ss_pred             Eeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHH
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMF  224 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~  224 (260)
                      +|||++..........            ...... +.+|+..  ..++.++|+||||++++++++ |..|+.   ..+..
T Consensus       154 ~dfgl~~~~~~~~~~~------------~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~  221 (270)
T cd05047         154 ADFGLSRGQEVYVKKT------------MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY  221 (270)
T ss_pred             CCCCCccccchhhhcc------------CCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHH
Confidence            9999975322110000            000011 2233332  457789999999999999996 776653   33333


Q ss_pred             HHHHhhccc----cCCccHHHHHHHHHHhcccccc
Q psy7935         225 NWILSSYRR----QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       225 ~~~~~~~~~----~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +.+...+..    ..+..+.+++.+|...++..|.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  256 (270)
T cd05047         222 EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP  256 (270)
T ss_pred             HHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCC
Confidence            333332211    1123345555555555555553

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0669|consensus

Probab=99.95  E-value=2.3e-29  Score=192.88  Aligned_cols=189  Identities=17%  Similarity=0.202  Sum_probs=140.6

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--------Ee
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--------LD   84 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--------~~   84 (260)
                      .+.|+-+.++|+|.||.||+|+.  .|+.||+|.+....-...      .....++|+.++..++|+|++        ..
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeG------fpitalreikiL~~lkHenv~nliEic~tk~   89 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEG------FPITALREIKILQLLKHENVVNLIEICRTKA   89 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccC------CcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence            34466688999999999999998  378899987655332211      134578999999999999988        11


Q ss_pred             CCC---chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          85 DVQ---KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        85 ~~~---~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                      ...   ...+|.+++++++...      ...++...+..++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|||
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccc
Confidence            211   2224667777665221      2458999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeeccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      +++.+..+......-       |+-.....|+.+++.    ..+.+..|+|+-||++.+|.|+..
T Consensus       170 lar~fs~~~n~~kpr-------ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp  227 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPR-------YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP  227 (376)
T ss_pred             cccceecccccCCCC-------cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence            998776554332211       233333344444333    568999999999999999988753

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=2e-27  Score=195.90  Aligned_cols=187  Identities=19%  Similarity=0.215  Sum_probs=130.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeC---C-Cc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDD---V-QK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~---~-~~   88 (260)
                      .|++.+.||+|+||.||+|.+  +++.||+|........ .     .....+.+|+.+++++. |+|++ +.+   . ..
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~-----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~   75 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-E-----GIPPTALREISLLQMLSESIYIVRLLDVEHVEEK   75 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-c-----CCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence            467789999999999999998  4889999975432211 1     11346788999999995 69998 222   1 11


Q ss_pred             -----hhh------hhHHHhhccCcc--cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEee
Q psy7935          89 -----SAI------QTLISNLDSQNI--TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDF  154 (260)
Q Consensus        89 -----~~~------~~l~~~l~~~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DF  154 (260)
                           .++      +++.+++.....  ...+++..++.++.|++.||+|||+++++||||+|+||+++. ++.+||+||
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~df  155 (295)
T cd07837          76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADL  155 (295)
T ss_pred             CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeec
Confidence                 111      344444432211  234788999999999999999999999999999999999998 899999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |++............      ..    ....+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 g~~~~~~~~~~~~~~------~~----~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~  213 (295)
T cd07837         156 GLGRAFSIPVKSYTH------EI----VTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFP  213 (295)
T ss_pred             ccceecCCCccccCC------cc----cccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCC
Confidence            998755332111000      00    11112233322   346789999999999999999987654

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=1.7e-27  Score=198.25  Aligned_cols=193  Identities=14%  Similarity=0.128  Sum_probs=129.8

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhh---
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAI---   91 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~---   91 (260)
                      +.+.+|.|+++.|+++..+++.||+|++......      ......+.+|+++++.++|+||+     +.+....++   
T Consensus         6 i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e   79 (314)
T cd08216           6 IGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCS------KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSP   79 (314)
T ss_pred             hhHhhcCCceEEEEEecCCCCEEEEEEEeccccc------hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEe
Confidence            3445566677777777777999999986543211      11245789999999999999999     333332222   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          +++.+++.... ...+++..+..++.|++.||+|||+++|+||||||+||+++.++.++|+|||.+..........
T Consensus        80 ~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~  158 (314)
T cd08216          80 LMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ  158 (314)
T ss_pred             ccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc
Confidence                45555554332 2347888889999999999999999999999999999999999999999999886553322111


Q ss_pred             ccccccc-cceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         168 VDLYVLK-RNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       168 ~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......+ ....+..+.+|+........+++++|+||+|++++++.+|..|+.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~  211 (314)
T cd08216         159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFK  211 (314)
T ss_pred             cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence            0000000 000111112222111112347789999999999999999988865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.95  E-value=5.2e-27  Score=191.61  Aligned_cols=227  Identities=17%  Similarity=0.167  Sum_probs=149.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~   86 (260)
                      .+.|+....||+|+||.||+|+..       .+.+++|.+....       .......+.+|++++++++|+|++ +++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   76 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-------DENLQSEFRRELDMFRKLSHKNVVRLLGL   76 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-------chHHHHHHHHHHHHHHhcCCcceeeeEEE
Confidence            356788999999999999999962       4678888743211       111245688999999999999998 2221


Q ss_pred             ----Cchhh-------hhHHHhhccCccc------ccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcE
Q psy7935          87 ----QKSAI-------QTLISNLDSQNIT------RENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHL  149 (260)
Q Consensus        87 ----~~~~~-------~~l~~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~  149 (260)
                          ...++       ++|.+++......      ..+++..+..++.|++.||+|||+++|+||||||+||+++.++.+
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~  156 (275)
T cd05046          77 CREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREV  156 (275)
T ss_pred             ECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcE
Confidence                11111       5677776543211      147899999999999999999999999999999999999999999


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecc-cccccc---HHHHHH
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFN  225 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~  225 (260)
                      +++|||++........     +.......++.+.+|++..  ....++++|+||+|++++++.+ +..|+.   ......
T Consensus       157 ~l~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~--~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~  229 (275)
T cd05046         157 KVSLLSLSKDVYNSEY-----YKLRNALIPLRWLAPEAVQ--EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLN  229 (275)
T ss_pred             EEcccccccccCcccc-----cccCCceeEEeecChhhhc--cCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHH
Confidence            9999999864432211     1111111122222222111  1346788999999999999887 544443   223333


Q ss_pred             HHHhhc-----cccCCccHHHHHHHHHHhcccccc
Q psy7935         226 WILSSY-----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       226 ~~~~~~-----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ....+.     +...+..+.+++.+|...++.+|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp  264 (275)
T cd05046         230 RLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRP  264 (275)
T ss_pred             HHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence            322111     112234556666666666666664

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=2.9e-27  Score=198.42  Aligned_cols=187  Identities=18%  Similarity=0.249  Sum_probs=132.9

Q ss_pred             cCcceeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC-----
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV-----   86 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~-----   86 (260)
                      |++.+.||+|+||.||++++.    +..+|+|.+... ....     ...+.+.+|+.+++++ .||||+ +++.     
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~-~~~~-----~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   75 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNV-FSKK-----ILAKRALRELKLLRHFRGHKNITCLYDMDIVFP   75 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccc-cccc-----hhHHHHHHHHHHHHHhcCCCChheeeeeeeecc
Confidence            567889999999999999984    668999975422 1111     1235678899999999 599999 4331     


Q ss_pred             Cc-hhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          87 QK-SAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        87 ~~-~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      .. ..+        ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+|||++.++.++|+|||++
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a  152 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLA  152 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence            11 111        4455555432   35788999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......... +.     ......+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       153 ~~~~~~~~~~-~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~  211 (332)
T cd07857         153 RGFSENPGEN-AG-----FMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK  211 (332)
T ss_pred             eecccccccc-cc-----cccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence            7654332110 00     00111122223344433   346788999999999999999876654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0614|consensus

Probab=99.95  E-value=1.3e-28  Score=204.72  Aligned_cols=227  Identities=16%  Similarity=0.164  Sum_probs=179.4

Q ss_pred             cccCcceeeccCCceeEEEEEEcCcc--EEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLGRS--VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      ..++.+..||-|+||+|=++..+++.  +|+|.+.++.     +.+....+.+..|-.++.....|.|+ ++..  ..-+
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~h-----IVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~ky  494 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKH-----IVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKY  494 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhh-----ccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchh
Confidence            44777889999999999999987655  7888754433     23333456788999999999999999 3332  2345


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +|.|+|.+-++.+      ...+.......++..+++|++|||++||++|||||+|.|++.+|.+||.|||+|+...+..
T Consensus       495 vYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  495 VYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence            6888888877655      3458888899999999999999999999999999999999999999999999998876654


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-----ccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-----RRQ  234 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~  234 (260)
                      ..           +++++++.+.+|+..  ..-+.++|.||+|+.++|+++|.-|++   .-...+.++.+.     |..
T Consensus       575 KT-----------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~  643 (732)
T KOG0614|consen  575 KT-----------WTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRR  643 (732)
T ss_pred             ce-----------eeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccc
Confidence            32           466666666677665  456788999999999999999999988   334456666654     444


Q ss_pred             CCccHHHHHHHHHHhccccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKRCM  258 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~~~  258 (260)
                      -..+..+++++|-+-++.+|....
T Consensus       644 I~k~a~~Lik~LCr~~P~ERLG~~  667 (732)
T KOG0614|consen  644 ITKTATDLIKKLCRDNPTERLGYQ  667 (732)
T ss_pred             cchhHHHHHHHHHhcCcHhhhccc
Confidence            457779999999999988887654

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=6e-27  Score=189.84  Aligned_cols=219  Identities=18%  Similarity=0.276  Sum_probs=156.9

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|+..+.||.|++|.||+|++.  ++.|++|.+......       .....+.+|+..+.+++|+|++ +.+    ....
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-------EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEI   74 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-------HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeE
Confidence            3677899999999999999984  899999986433211       2246789999999999999999 222    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++...   ..+++...+.++.|++.|++|||+ ++++|+||+|+||+++.++.++|+|||++....
T Consensus        75 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~  151 (264)
T cd06623          75 SIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE  151 (264)
T ss_pred             EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            22       5566665443   357889999999999999999999 999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------HHHHHHHHHhhccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWILSSYRR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~~~~~~~  233 (260)
                      .......          .......+.+|+..  ...+.++|+||||++++++++|..|+.      ..+....+......
T Consensus       152 ~~~~~~~----------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~  221 (264)
T cd06623         152 NTLDQCN----------TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPP  221 (264)
T ss_pred             cCCCccc----------ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCC
Confidence            3322110          01111112223322  356788999999999999999988864      23444454443322


Q ss_pred             c-----CCccHHHHHHHHHHhcccccc
Q psy7935         234 Q-----NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~-----~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .     .+..+.+++++|...++..|.
T Consensus       222 ~~~~~~~~~~l~~li~~~l~~~p~~R~  248 (264)
T cd06623         222 SLPAEEFSPEFRDFISACLQKDPKKRP  248 (264)
T ss_pred             CCCcccCCHHHHHHHHHHccCChhhCC
Confidence            2     234578888888877777775

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=2.7e-27  Score=191.17  Aligned_cols=221  Identities=18%  Similarity=0.221  Sum_probs=154.3

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~   90 (260)
                      |...+.||+|+||.||+|.++  |..+|+|.+.......      .....+.+|+.+++.++|+|++ +.+    ....+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~   75 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV------KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLF   75 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc------hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEE
Confidence            567899999999999999984  7899999864432211      1235678899999999999999 222    22212


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeecccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~~~~  162 (260)
                      +       ++|.+++.... ...+++..+..++.|++.||+|||+++++|+||||+||+++.++ .++|+|||.+.....
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             EEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence            2       45555554322 22468888999999999999999999999999999999999875 569999998876543


Q ss_pred             cccccccccccccceeeeeeeeeecC-cccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc---
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWS-KGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR---  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---  233 (260)
                      ......           ...+.+.|. |+..  ..++.++|+||+|+++++++++..|+.   ..+.......+...   
T Consensus       155 ~~~~~~-----------~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  223 (257)
T cd08225         155 SMELAY-----------TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPIS  223 (257)
T ss_pred             Cccccc-----------ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCC
Confidence            221110           011222232 2222  346789999999999999999988866   33444444333222   


Q ss_pred             -cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+..+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~i~~~l~~~p~~Rpt  247 (257)
T cd08225         224 PNFSRDLRSLISQLFKVSPRDRPS  247 (257)
T ss_pred             CCCCHHHHHHHHHHhccChhhCcC
Confidence             12456788888888888888853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0199|consensus

Probab=99.95  E-value=1.4e-27  Score=205.25  Aligned_cols=216  Identities=18%  Similarity=0.302  Sum_probs=162.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---C--ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---G--RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~   87 (260)
                      +.+.....++||+|+||.|++|.|+   |  -.||||.+.......       .-..|++|+.++.+++|+|++ +++..
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-------~mddflrEas~M~~L~H~hliRLyGvV  180 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-------IMDDFLREASHMLKLQHPHLIRLYGVV  180 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-------hHHHHHHHHHHHHhccCcceeEEeeee
Confidence            3344667899999999999999994   3  378999754433211       235799999999999999999 55532


Q ss_pred             c-hhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          88 K-SAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ~-~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      . ..+         |+|.+.|.. .....+....+++++.||+.|++||-+++.|||||-.+|+|+-....+||+|||+.
T Consensus       181 l~qp~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLm  259 (1039)
T KOG0199|consen  181 LDQPAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLM  259 (1039)
T ss_pred             ccchhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccce
Confidence            2 111         889988877 33567889999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccc-c-----------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTED-K-----------------  216 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~-~-----------------  216 (260)
                      +.....++    .|.+....    -..+-| +++.+  ..++.++|+|+||+++|||.+.. .                 
T Consensus       260 RaLg~ned----~Yvm~p~r----kvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~  331 (1039)
T KOG0199|consen  260 RALGENED----MYVMAPQR----KVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG  331 (1039)
T ss_pred             eccCCCCc----ceEecCCC----cCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc
Confidence            87766543    23222211    122234 45555  56899999999999999998754 2                 


Q ss_pred             ---------cccHHHHHHHHHhhccccCCccHHHHHHHH
Q psy7935         217 ---------AVDFRDMFNWILSSYRRQNRKQFETVMKTF  246 (260)
Q Consensus       217 ---------~~~~~~~~~~~~~~~~~~~~~~~~~il~~l  246 (260)
                               |.+..+++.+||...+. +|++|.++-+++
T Consensus       332 erLpRPk~csedIY~imk~cWah~pa-DRptFsair~~~  369 (1039)
T KOG0199|consen  332 ERLPRPKYCSEDIYQIMKNCWAHNPA-DRPTFSAIREDL  369 (1039)
T ss_pred             ccCCCCCCChHHHHHHHHHhccCCcc-ccccHHHHHHhH
Confidence                     23366778888885544 478888876444

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=4.1e-27  Score=198.22  Aligned_cols=190  Identities=17%  Similarity=0.203  Sum_probs=132.6

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~   88 (260)
                      ..+|++.+.||.|+||.||+|.+  +|+.|++|.+..+..        ...+.+.+|++++++++|||++ +++   ...
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--------~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~   75 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--------QSVKHALREIKIIRRLDHDNIVKVYEVLGPSG   75 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--------chHHHHHHHHHHHHhcCCCcchhhHhhhcccc
Confidence            35688899999999999999998  488999998654432        1135678899999999999999 222   111


Q ss_pred             -------------hhhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEE
Q psy7935          89 -------------SAIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLV  150 (260)
Q Consensus        89 -------------~~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~k  150 (260)
                                   ...+.+++|+.....    ...+++..++.++.|++.||+|||++|++||||||+||+++. ++.++
T Consensus        76 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          76 SDLTEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             cccccccccccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEE
Confidence                         011233334332100    124788999999999999999999999999999999999985 66889


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |+|||.+............ ..  ..    .+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 l~dfg~~~~~~~~~~~~~~-~~--~~----~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~  220 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGY-LS--EG----LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA  220 (342)
T ss_pred             ECCcccceecCCccccccc-cc--cc----cccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence            9999998765432211100 00  00    011112233322   346778999999999999999988874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=2e-27  Score=199.09  Aligned_cols=188  Identities=15%  Similarity=0.098  Sum_probs=128.5

Q ss_pred             eeeccC--CceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh-
Q psy7935          22 ECFKQG--AEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI-   91 (260)
Q Consensus        22 ~~lg~G--~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~-   91 (260)
                      +.||.|  +||.||++++  .|+.||+|+.......    .  ...+.+.+|+.+++.++||||+ +++    ....++ 
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~----~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT----E--EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC----H--HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEE
Confidence            456666  9999999998  5899999986433211    1  1236788999999999999998 222    222111 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                            +++.+++.... ...+++..+..++.|++.||+|||+++++||||||+|||++.++.++++||+.+........
T Consensus        78 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~  156 (328)
T cd08226          78 SPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ  156 (328)
T ss_pred             EecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc
Confidence                  35555554332 23478888889999999999999999999999999999999999999999986543322111


Q ss_pred             ccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....+..+...   .....+.+|+..    ..++.++|+||+|++++++++|..|+.
T Consensus       157 ~~~~~~~~~~~~---~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~  211 (328)
T cd08226         157 KAKVVYDFPQFS---TSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ  211 (328)
T ss_pred             cccccccccccc---cCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            111111111100   011123344433    336789999999999999999988765

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=4.1e-27  Score=195.48  Aligned_cols=224  Identities=15%  Similarity=0.167  Sum_probs=152.8

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----e
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----D   84 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~   84 (260)
                      ......|+..+.||+|+||.||+|++  ++..+++|.+......     .......+.+|+++++.++|+|++ +    .
T Consensus        11 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   85 (308)
T cd06634          11 DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL   85 (308)
T ss_pred             CCcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-----ChHHHHHHHHHHHHHHhCCCCCcccEEEEEE
Confidence            44566688899999999999999998  4788999976432111     111235678899999999999998 2    2


Q ss_pred             CCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          85 DVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        85 ~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      .....++      +++.+++...  ...+++..+..++.|++.|+.|||+++++||||+|+||+++.++.++|+|||++.
T Consensus        86 ~~~~~~lv~e~~~~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  163 (308)
T cd06634          86 REHTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSAS  163 (308)
T ss_pred             cCCeeEEEEEccCCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccce
Confidence            2222222      3333333221  2347888889999999999999999999999999999999999999999999986


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      ........          ..+..    +.+|+..     ...+.++|+||+|++++++++|..|+.   ..+........
T Consensus       164 ~~~~~~~~----------~~~~~----y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  229 (308)
T cd06634         164 IMAPANXF----------VGTPY----WMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  229 (308)
T ss_pred             eecCcccc----------cCCcc----ccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhc
Confidence            54332110          01111    2222221     346789999999999999999987754   12222222221


Q ss_pred             cc-----ccCCccHHHHHHHHHHhccccccc
Q psy7935         231 YR-----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~-----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..     ...+..+.+++++|....+..|..
T Consensus       230 ~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~  260 (308)
T cd06634         230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPT  260 (308)
T ss_pred             CCCCcCcccccHHHHHHHHHHhhCCcccCCC
Confidence            11     122345677888888777777754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-27  Score=193.32  Aligned_cols=228  Identities=17%  Similarity=0.189  Sum_probs=155.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC---
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV---   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~---   86 (260)
                      +.+.|++.+.||+|++|.||+|.+.  ++.+++|++.....         ....+.+|+.+++++ .|+|++ +++.   
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   74 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---------EEEEIKEEYNILRKYSNHPNIATFYGAFIK   74 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---------hHHHHHHHHHHHHHhcCCCChheEEEEEEe
Confidence            3466888999999999999999984  78899998543211         235688999999999 699998 3221   


Q ss_pred             -C----chhhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          87 -Q----KSAIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        87 -~----~~~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                       .    ....+.+++|+.+..+          ...+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|
T Consensus        75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l  154 (275)
T cd06608          75 KNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKL  154 (275)
T ss_pred             cCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEE
Confidence             1    1112223343332211          235788899999999999999999999999999999999999999999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCc-c--ccccccccceeEeecceeeeecccccccc---HHHHHH
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSK-G--TLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFN  225 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~  225 (260)
                      +|||++............      ...+..+.+|+... .  ....++.++|+||+|++++++++|..|+.   ......
T Consensus       155 ~d~~~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  228 (275)
T cd06608         155 VDFGVSAQLDSTLGRRNT------FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF  228 (275)
T ss_pred             CCCccceecccchhhhcC------ccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence            999998655332211100      01111122222110 0  11346778999999999999999988875   222333


Q ss_pred             HHHhhccc------cCCccHHHHHHHHHHhccccccc
Q psy7935         226 WILSSYRR------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       226 ~~~~~~~~------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++......      ..+..+.+++++|...++..|..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt  265 (275)
T cd06608         229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF  265 (275)
T ss_pred             HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC
Confidence            33332221      12346788999998888888864

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=6.2e-27  Score=196.79  Aligned_cols=185  Identities=19%  Similarity=0.263  Sum_probs=133.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK-   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~-   88 (260)
                      +.|.+.+.||+|+||.||+|++  +++.||||.+.......      .....+.+|+.+++.++|+|++ +.+.   .. 
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~   78 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR------IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR   78 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc------chhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence            3578899999999999999998  48999999854321111      1134567899999999999998 3221   11 


Q ss_pred             -----hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          89 -----SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        89 -----~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                           .++      +.|.+++...   ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++
T Consensus        79 ~~~~~~~lv~e~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~  155 (337)
T cd07858          79 EAFNDVYIVYELMDTDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA  155 (337)
T ss_pred             cccCcEEEEEeCCCCCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence                 111      3444444332   35889999999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...........          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       156 ~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  210 (337)
T cd07858         156 RTTSEKGDFMT----------EYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP  210 (337)
T ss_pred             cccCCCccccc----------ccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence            76543211100          00111122233322   247789999999999999999877653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=6.3e-27  Score=194.78  Aligned_cols=226  Identities=13%  Similarity=0.140  Sum_probs=150.1

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ..+++...+.||+|+||.||+|++  .++.+++|.+.......     ......+.+|+++++.++|||++ +.    +.
T Consensus        19 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   93 (313)
T cd06633          19 PEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT-----NEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE   93 (313)
T ss_pred             HHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-----hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC
Confidence            344567788999999999999997  48899999865432211     11235688899999999999998 22    22


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++      +++.+++...  ...+++..+..++.|++.|++|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        94 ~~~~lv~e~~~~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633          94 HTAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CEEEEEEecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            22222      3344443322  234788888889999999999999999999999999999999999999999987543


Q ss_pred             cccccccccccccccceeeeeeeeeecCcc-ccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-c--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKG-TLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-R--  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~--  233 (260)
                      .....          ...+..+.+|+.... ....++.++|+||+|++++++.+|..|+.   ............. .  
T Consensus       172 ~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  241 (313)
T cd06633         172 SPANS----------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQ  241 (313)
T ss_pred             CCCCC----------ccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Confidence            21110          111112222222110 11447788999999999999999987754   1222222222111 1  


Q ss_pred             --cCCccHHHHHHHHHHhccccccc
Q psy7935         234 --QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 --~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        ..+..+.+++.+|...++..|..
T Consensus       242 ~~~~~~~l~~li~~~l~~~P~~Rp~  266 (313)
T cd06633         242 SNEWTDSFRGFVDYCLQKIPQERPA  266 (313)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcC
Confidence              11234677777777777777653

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.94  E-value=6e-27  Score=191.76  Aligned_cols=218  Identities=15%  Similarity=0.146  Sum_probs=148.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----EeCCCch
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----LDDVQKS   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~~~~~~   89 (260)
                      |.+.+.||+|+||.||+|++  +++.+|+|.+.... ....      .....+|+..+.++. |+|++     +.+....
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~-~~~~------~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   73 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHF-KSLE------QVNNLREIQALRRLSPHPNILRLIEVLFDRKTG   73 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhcc-CCch------hhhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence            45678999999999999998  48899999754321 1111      123457888888885 99998     2322112


Q ss_pred             hh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .+        +++.+++...  ...+++..+..++.|++.||+|||+++++||||+|+||+++. +.+||+|||++....
T Consensus        74 ~~~lv~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~  150 (282)
T cd07831          74 RLALVFELMDMNLYELIKGR--KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIY  150 (282)
T ss_pred             cEEEEEecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence            22        4555555432  135788999999999999999999999999999999999999 999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY----  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~----  231 (260)
                      .......       ..    ....+.+|+..   ..++.++|+||+|+++++++++..|+.   ..+.+.......    
T Consensus       151 ~~~~~~~-------~~----~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~  219 (282)
T cd07831         151 SKPPYTE-------YI----STRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPD  219 (282)
T ss_pred             cCCCcCC-------CC----CCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCC
Confidence            3221110       00    11112233322   346789999999999999999876664   112222111100    


Q ss_pred             ----------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ----------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ----------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                  ....+..+.+++.+|...++..|..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  272 (282)
T cd07831         220 AEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT  272 (282)
T ss_pred             HHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC
Confidence                                        0122466788888998888888864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=4.9e-27  Score=190.26  Aligned_cols=222  Identities=19%  Similarity=0.216  Sum_probs=152.1

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchhh-----
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSAI-----   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~~-----   91 (260)
                      ||.|+||.||++++.  |+.+++|.+.....     ......+.+.+|++++.+++|+|++ +    .+....++     
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM-----IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhh-----hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecC
Confidence            589999999999984  89999998643321     1223356788999999999999999 2    22222222     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                        ++|.+++...   ..+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++........... 
T Consensus        76 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-  151 (265)
T cd05579          76 PGGDLASLLENV---GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL-  151 (265)
T ss_pred             CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-
Confidence              3455555432   2578889999999999999999999999999999999999999999999999865433221100 


Q ss_pred             ccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccC--Ccc
Q psy7935         170 LYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQN--RKQ  238 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~--~~~  238 (260)
                        ...............| +|+..  ...+.++|+||+|++++++++|..|+.   ..+....+..+..   ...  ++.
T Consensus       152 --~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (265)
T cd05579         152 --NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDE  229 (265)
T ss_pred             --ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHH
Confidence              0000000001111112 22222  336778999999999999999988865   4555555543221   111  456


Q ss_pred             HHHHHHHHHHhccccccc
Q psy7935         239 FETVMKTFAEVELRGRKR  256 (260)
Q Consensus       239 ~~~il~~l~~~~~~~r~~  256 (260)
                      +.+++.+|...++..|..
T Consensus       230 ~~~~i~~~l~~~p~~Rpt  247 (265)
T cd05579         230 AIDLISKLLVPDPEKRLG  247 (265)
T ss_pred             HHHHHHHHhcCCHhhcCC
Confidence            788899998888888864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=4e-27  Score=192.62  Aligned_cols=183  Identities=20%  Similarity=0.254  Sum_probs=133.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|+..+.||.|+||.||+|.+  ++..+|+|......     ..  .....+.+|+.++.+++|||++ +    .+...
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-----~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   76 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-----AE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTK   76 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-----ch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCe
Confidence            4577889999999999999987  47899999753221     11  1235688999999999999999 2    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...    .+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06641          77 LWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  152 (277)
T ss_pred             EEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence            222       3455555432    47888888999999999999999999999999999999999999999999986553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......          .......+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       153 ~~~~~~~----------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  202 (277)
T cd06641         153 DTQIKRN----------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHS  202 (277)
T ss_pred             cchhhhc----------cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            3211100          00111112233322  346778999999999999999988754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.94  E-value=2.8e-27  Score=193.42  Aligned_cols=233  Identities=15%  Similarity=0.160  Sum_probs=159.7

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----EeCCCc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----LDDVQK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~~~~~   88 (260)
                      .|+..+.||+|+||.||+|+.  ++++|++|++......     .......+.+|.++++++. |+||+     +.+...
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~   76 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI-----KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEEN   76 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc-----chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCce
Confidence            477789999999999999998  5899999986443221     1122356788999999998 99999     222222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          77 LYFVLEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             EEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            222       4555555443   258899999999999999999999999999999999999999999999999987654


Q ss_pred             cccccccccc----------ccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHH
Q psy7935         162 STEDKAVDLY----------VLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNW  226 (260)
Q Consensus       162 ~~~~~~~d~~----------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~  226 (260)
                      ..........          ..............+.+|+..  ...+.++|+||+|++++++++|..|+.   ....+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  233 (280)
T cd05581         154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK  233 (280)
T ss_pred             CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence            3221100000          000000111111112233322  346788999999999999999988876   2223333


Q ss_pred             HHhh---ccccCCccHHHHHHHHHHhcccccccc
Q psy7935         227 ILSS---YRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       227 ~~~~---~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +...   .+...++.+.+++++|...++..|...
T Consensus       234 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  267 (280)
T cd05581         234 ILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGV  267 (280)
T ss_pred             HHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCc
Confidence            3322   233335677899999998888888653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.94  E-value=1.2e-27  Score=194.59  Aligned_cols=219  Identities=15%  Similarity=0.169  Sum_probs=142.6

Q ss_pred             eeeccCCceeEEEEEEc--------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc
Q psy7935          22 ECFKQGAEGRIFKTEYL--------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK   88 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~   88 (260)
                      +.||+|+||.||+|++.        +..+++|.+.....       ......+.+|+.+++.++||||+ +.+.    ..
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-------DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEP   73 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc-------hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCC
Confidence            36899999999999874        25789887532210       11245688999999999999999 3321    11


Q ss_pred             hhh-------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-----cEEEE
Q psy7935          89 SAI-------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-----HLVMI  152 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-----~~kl~  152 (260)
                      .++       ++|.+++.....    ...+++..+..++.|++.||+|||+++++|+||||+||+++.++     .++|+
T Consensus        74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~  153 (269)
T cd05044          74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG  153 (269)
T ss_pred             eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC
Confidence            111       566666643211    23467888899999999999999999999999999999999877     89999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNW  226 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~  226 (260)
                      |||++............    +....+.    .+.+|+..  ..++.++|+||||++++++++ |..|+.   ..+....
T Consensus       154 dfg~~~~~~~~~~~~~~----~~~~~~~----~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~  225 (269)
T cd05044         154 DFGLARDIYKSDYYRKE----GEGLLPV----RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH  225 (269)
T ss_pred             CcccccccccccccccC----cccCCCc----cccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH
Confidence            99998755332111100    0011111    12233322  457889999999999999997 766643   2222222


Q ss_pred             HHhhc----cccCCccHHHHHHHHHHhcccccc
Q psy7935         227 ILSSY----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       227 ~~~~~----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +..+.    +...++.+.+++.+|...++..|.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  258 (269)
T cd05044         226 VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERP  258 (269)
T ss_pred             HhcCCccCCcccchHHHHHHHHHHcCCCcccCC
Confidence            22211    122234556666666666666654

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=1.7e-27  Score=193.31  Aligned_cols=219  Identities=20%  Similarity=0.233  Sum_probs=155.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      .|+..+.||+|++|.||++.+.  ++.+++|.+.....       ......+.+|++.+++++|||++     +......
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~   74 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-------EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDI   74 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-------hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEE
Confidence            4667889999999999999985  88999997643221       12346788999999999999998     2222222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++....  ..+++..+..++.|++.|++|||+ .+++|+||||+||+++.++.++|+|||.+....
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~  152 (265)
T cd06605          75 SICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV  152 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH
Confidence            22       45555554431  457888899999999999999999 999999999999999999999999999986553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH--------HHHHHHHHhhc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF--------RDMFNWILSSY  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~  231 (260)
                      ......        ...+..+    .+|+..  ..++.++|+||+|++++++++|..|+..        .+..+......
T Consensus       153 ~~~~~~--------~~~~~~y----~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  220 (265)
T cd06605         153 NSLAKT--------FVGTSSY----MAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP  220 (265)
T ss_pred             HHHhhc--------ccCChhc----cCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC
Confidence            321110        0011111    122221  3577889999999999999999887642        23444444432


Q ss_pred             ccc-----CCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQ-----NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~-----~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...     .++.+.+++.+|...++..|..
T Consensus       221 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  250 (265)
T cd06605         221 PPRLPSGKFSPDFQDFVNLCLIKDPRERPS  250 (265)
T ss_pred             CCCCChhhcCHHHHHHHHHHcCCCchhCcC
Confidence            222     2445788888888888888764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=7.7e-27  Score=193.11  Aligned_cols=190  Identities=20%  Similarity=0.275  Sum_probs=134.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~   87 (260)
                      .+.|++.+.||+|+||.||+|.+.  |+.|++|.+.....+..      ....+.+|++++++++|||++ +.+.    .
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~------~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~   79 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG------FPITAIREIKILRQLNHRNIVNLKEIVTDKQ   79 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC------chHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence            456888999999999999999984  88999998654322111      124577899999999999999 3321    1


Q ss_pred             --------chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          88 --------KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        88 --------~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                              ...++.+++|+.+...      ...+++..+..++.|++.||+|||++||+|+||+|+||++++++.+||+|
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          80 DALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             hhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence                    1122334444433110      23478899999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++..........   +.  ......    .+.+|+..   ...+.++|+||+|++++++++|+.|+.
T Consensus       160 fg~~~~~~~~~~~~---~~--~~~~~~----~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~  219 (302)
T cd07864         160 FGLARLYNSEESRP---YT--NKVITL----WYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQ  219 (302)
T ss_pred             ccccccccCCcccc---cc--cceecc----CccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            99987654332110   00  000011    12222222   235788999999999999999977665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=1e-26  Score=190.69  Aligned_cols=185  Identities=22%  Similarity=0.289  Sum_probs=133.1

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CC-chh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQ-KSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~-~~~   90 (260)
                      |++.+.||+|++|.||+|++.  ++.+++|.+.... ....     ....+.+|++++++++|+|++ +.+   .. ...
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEG-----FPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-cccc-----chHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence            456889999999999999984  7899999865432 1111     134678899999999999999 221   11 122


Q ss_pred             h--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 I--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .        ++|.+++...  ...+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        75 ~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~  152 (287)
T cd07840          75 IYMVFEYMDHDLTGLLDSP--EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTK  152 (287)
T ss_pred             EEEEeccccccHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence            2        3444444332  13588889999999999999999999999999999999999999999999999876644


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......         .......+.+|+..   ..+++++|+||||+++++++++..|++
T Consensus       153 ~~~~~~~---------~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~  203 (287)
T cd07840         153 RNSADYT---------NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ  203 (287)
T ss_pred             CCccccc---------ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence            4311000         00011112233322   246789999999999999999987765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.94  E-value=7.2e-27  Score=196.82  Aligned_cols=182  Identities=21%  Similarity=0.274  Sum_probs=132.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .++|++.+.||+|+||.||++.+  .+..||||++.... .     .......+.+|+.++++++|+||+ +.+.   ..
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-Q-----SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL   87 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-c-----chHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence            45588899999999999999997  48899999853221 1     111235678999999999999998 3221   11


Q ss_pred             h-------hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          89 S-------AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        89 ~-------~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                      .       ++      .+|.+++..    ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||
T Consensus        88 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg  163 (343)
T cd07880          88 SLDRFHDFYLVMPFMGTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  163 (343)
T ss_pred             cccccceEEEEEecCCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence            1       11      233333332    347888999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++.........             ......+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       164 ~~~~~~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~  217 (343)
T cd07880         164 LARQTDSEMTG-------------YVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK  217 (343)
T ss_pred             cccccccCccc-------------cccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            98754332110             0001111222222   236788999999999999999987765

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG4278|consensus

Probab=99.94  E-value=1.1e-27  Score=203.87  Aligned_cols=210  Identities=17%  Similarity=0.262  Sum_probs=161.8

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ-   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~-   87 (260)
                      ......-++||.|.||.||.|.|.  .--||||.+....         ..-+.|++|+.+++.++|||++    ++... 
T Consensus       266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---------MeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep  336 (1157)
T KOG4278|consen  266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP  336 (1157)
T ss_pred             chheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---------hhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence            344555789999999999999996  5678999754322         2357899999999999999999    22222 


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       |.|.||+...+ ...++.-.++.++.||..|++||..+++|||||-.+|.|+.++..+|++|||+++++
T Consensus       337 PFYIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM  415 (1157)
T KOG4278|consen  337 PFYIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM  415 (1157)
T ss_pred             CeEEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence            2222       99999998876 456788888889999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccceeeeeeee---eec-Ccccc--ccccccceeEeecceeeeecccc-------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVA---YCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTED-------------------  215 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~---~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~-------------------  215 (260)
                      ...-             |+.-.++   .-| +|+.+  ..++.|+|+|+||+++||+.|=.                   
T Consensus       416 tgDT-------------YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg  482 (1157)
T KOG4278|consen  416 TGDT-------------YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG  482 (1157)
T ss_pred             cCCc-------------eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc
Confidence            5431             1111111   124 33433  66899999999999999987632                   


Q ss_pred             --------ccccHHHHHHHHHhhccccCCccHHHHHHHHHH
Q psy7935         216 --------KAVDFRDMFNWILSSYRRQNRKQFETVMKTFAE  248 (260)
Q Consensus       216 --------~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~  248 (260)
                              +|+...+++.+||...+. +|+++.|+.+.++.
T Consensus       483 yRM~~PeGCPpkVYeLMraCW~WsPs-DRPsFaeiHqafEt  522 (1157)
T KOG4278|consen  483 YRMDGPEGCPPKVYELMRACWNWSPS-DRPSFAEIHQAFET  522 (1157)
T ss_pred             ccccCCCCCCHHHHHHHHHHhcCCcc-cCccHHHHHHHHHH
Confidence                    356678999999994455 58899888877753

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=5.3e-27  Score=189.45  Aligned_cols=220  Identities=18%  Similarity=0.243  Sum_probs=152.6

Q ss_pred             CcceeeccCCceeEEEEEEcC------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          19 QPAECFKQGAEGRIFKTEYLG------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ++.+.||+|+||.||++++.+      ..||+|.+.....  .     .....+..|+..+..++|+|++ +++    ..
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   74 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--E-----QQIEEFLREARIMRKLDHPNIVKLLGVCTEEE   74 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--h-----HHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence            567899999999999999853      7899998533211  1     0246788999999999999999 222    12


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++.... ...+++..+..++.|++.||++||+++++|+||||+||+++.++.++|+|||++...
T Consensus        75 ~~~~i~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~  153 (258)
T smart00219       75 PLMIVMEYMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDL  153 (258)
T ss_pred             eeEEEEeccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceec
Confidence            1122       45555554432 111889999999999999999999999999999999999999999999999998766


Q ss_pred             cccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc-
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ........+     ..     .+.+.| +|+..  ..++.++|+||+|++++++++ +..|+.   ...+.+.+..... 
T Consensus       154 ~~~~~~~~~-----~~-----~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~  223 (258)
T smart00219      154 YDDDYYKKK-----GG-----KLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL  223 (258)
T ss_pred             ccccccccc-----cC-----CCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC
Confidence            543211111     00     011222 33322  457889999999999999988 555543   4445555444332 


Q ss_pred             ---ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         ...+..+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt  250 (258)
T smart00219      224 PKPENCPPEIYKLMLQCWAEDPEDRPT  250 (258)
T ss_pred             CCCCcCCHHHHHHHHHHCcCChhhCcC
Confidence               222455677888888877777753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.4e-27  Score=194.87  Aligned_cols=221  Identities=18%  Similarity=0.224  Sum_probs=149.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .|+..+.||.|++|.||+|.+  +++.+|+|.+......       .....+.+|++++++++||||+ +.+    ....
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   74 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-------DLQKQILRELEINKSCKSPYIVKYYGAFLDESSS   74 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch-------HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCC
Confidence            466789999999999999998  4789999986432111       1245688999999999999999 322    2222


Q ss_pred             hh---------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          90 AI---------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .+         ++|.+++.... ....+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~  154 (287)
T cd06621          75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGE  154 (287)
T ss_pred             eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccc
Confidence            22         34444432211 023478888999999999999999999999999999999999999999999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHH--------HHHHHHHh
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR--------DMFNWILS  229 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~--------~~~~~~~~  229 (260)
                      ........        ......    +.+|+..  ..++.++|+||+|++++++++|..|+...        +.......
T Consensus       155 ~~~~~~~~--------~~~~~~----y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  222 (287)
T cd06621         155 LVNSLAGT--------FTGTSF----YMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN  222 (287)
T ss_pred             cccccccc--------ccCCcc----ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc
Confidence            43221110        000111    1122222  45678899999999999999998876522        23332222


Q ss_pred             hccc----------cCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYRR----------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~~----------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....          ..++.+.+++.+|.+.++.+|..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  259 (287)
T cd06621         223 MPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT  259 (287)
T ss_pred             CCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC
Confidence            1110          01134567777777777777743

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=8.3e-27  Score=195.39  Aligned_cols=187  Identities=25%  Similarity=0.277  Sum_probs=135.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC--
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ--   87 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~--   87 (260)
                      +|++.+.||+|++|.||+|++.  ++.+++|.+.... .     .....+.+.+|+.+++.++|+|++ +.    ...  
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-D-----DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE   74 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-c-----cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence            3677899999999999999984  7899999864321 1     111245688999999999999998 22    211  


Q ss_pred             ---chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          88 ---KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ---~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                         ..++      ++|.+++...   ..+++..++.++.|++.||+|||++|++||||||+|||++.++.++|+|||++.
T Consensus        75 ~~~~~~lv~e~~~~~l~~~l~~~---~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~  151 (330)
T cd07834          75 DFNDVYIVTELMETDLHKVIKSP---QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLAR  151 (330)
T ss_pred             cccceEEEecchhhhHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence               1111      3455555443   268889999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--c-cccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q-SYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...........       .........+.+|+..  . ..+.++|+||+|++++++.+|..|+.
T Consensus       152 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~  208 (330)
T cd07834         152 GVDPDEDEKGF-------LTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP  208 (330)
T ss_pred             eeccccccccc-------ccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence            66543211000       0011111112233322  2 57788999999999999999987764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.94  E-value=8.3e-27  Score=191.57  Aligned_cols=216  Identities=15%  Similarity=0.219  Sum_probs=148.8

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      .++..+.||+|++|.||++.+  .++.+++|.+....        ....+.+.+|+.+++++.|+|++ +++    ....
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~   91 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--------QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL   91 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--------hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence            466678999999999999997  47889999753221        11245688999999999999999 322    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...    .++...+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus        92 ~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~  167 (285)
T cd06648          92 WVVMEFLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSK  167 (285)
T ss_pred             EEEEeccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhcc
Confidence            22       3455554432    378888899999999999999999999999999999999999999999998765432


Q ss_pred             cccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcccc--
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQ--  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--  234 (260)
                      ......      ..     .+.+.| +|+..  ..++.++|+||+|++++++++|..|+.   ..+.........+..  
T Consensus       168 ~~~~~~------~~-----~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~  236 (285)
T cd06648         168 EVPRRK------SL-----VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK  236 (285)
T ss_pred             CCcccc------cc-----cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc
Confidence            211100      00     011122 22222  346788999999999999999987754   223333333322111  


Q ss_pred             ----CCccHHHHHHHHHHhcccccc
Q psy7935         235 ----NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ----~~~~~~~il~~l~~~~~~~r~  255 (260)
                          .+..+.+++.+|...++..|.
T Consensus       237 ~~~~~~~~l~~li~~~l~~~p~~Rp  261 (285)
T cd06648         237 NLHKVSPRLRSFLDRMLVRDPAQRA  261 (285)
T ss_pred             ccccCCHHHHHHHHHHcccChhhCc
Confidence                234567777777777777774

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.94  E-value=9.9e-27  Score=191.10  Aligned_cols=224  Identities=19%  Similarity=0.268  Sum_probs=154.8

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      ....+.|+..+.+|+|++|.||+|.+.  ++++++|++.....         ..+.+.+|++.++.++|+|++ +++   
T Consensus        15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~   85 (286)
T cd06614          15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---------NKELIINEILIMKDCKHPNIVDYYDSYL   85 (286)
T ss_pred             CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---------hHHHHHHHHHHHHHCCCCCeeEEEEEEE
Confidence            345556888999999999999999985  88999998643211         245688999999999999998 322   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++....  ..++...+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~  163 (286)
T cd06614          86 VGDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFA  163 (286)
T ss_pred             ECCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchh
Confidence             222222       45555554431  25888899999999999999999999999999999999999999999999988


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH---HHHHHHHHhhcc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSSYR  232 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~  232 (260)
                      ............          ..+...+.+|+..  ..++.++|+||+|++++++++|..|+..   ............
T Consensus       164 ~~~~~~~~~~~~----------~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~  233 (286)
T cd06614         164 AQLTKEKSKRNS----------VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI  233 (286)
T ss_pred             hhhccchhhhcc----------ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            654433211100          0011111222222  3467899999999999999999877552   111122111111


Q ss_pred             -c-----cCCccHHHHHHHHHHhccccccc
Q psy7935         233 -R-----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -~-----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       .     ..+..+.+++++|...++..|..
T Consensus       234 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt  263 (286)
T cd06614         234 PPLKNPEKWSPEFKDFLNKCLVKDPEKRPS  263 (286)
T ss_pred             CCCcchhhCCHHHHHHHHHHhccChhhCcC
Confidence             1     12345677888887777777753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.2e-27  Score=191.79  Aligned_cols=219  Identities=18%  Similarity=0.248  Sum_probs=148.1

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC---CCCeE-EeC----C
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR---MADIC-LDD----V   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~-~~~----~   86 (260)
                      .|+..+.||+|+||.||+|.+  .++.+++|.+......  .     ....+.+|+.+++++.   |||++ +++    .
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~-----~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~   74 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--D-----DVSDIQREVALLSQLRQSQPPNITKYYGSYLKG   74 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--h-----hHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence            467789999999999999998  4889999975432111  1     1345778999988886   99999 332    2


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...    .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  150 (277)
T cd06917          75 PRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAAL  150 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceee
Confidence            22222       4555555432    478888999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccHHHHHHHHH---hhc-c
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWIL---SSY-R  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~---~~~-~  232 (260)
                      ..........      ...+.    .+.+|+..   ..++.++|+||+|++++++++|..|+...+......   ... +
T Consensus       151 ~~~~~~~~~~------~~~~~----~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~  220 (277)
T cd06917         151 LNQNSSKRST------FVGTP----YWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP  220 (277)
T ss_pred             cCCCcccccc------ccCCc----ceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCC
Confidence            5443211100      01111    12233322   336789999999999999999988865221111111   100 0


Q ss_pred             c----cCCccHHHHHHHHHHhccccccc
Q psy7935         233 R----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .    ..+..+.+++.+|...++..|..
T Consensus       221 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~  248 (277)
T cd06917         221 RLEDNGYSKLLREFVAACLDEEPKERLS  248 (277)
T ss_pred             CCCcccCCHHHHHHHHHHcCCCcccCcC
Confidence            0    12345666777777666666653

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.94  E-value=1e-26  Score=194.68  Aligned_cols=182  Identities=21%  Similarity=0.275  Sum_probs=131.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~   88 (260)
                      .++|++.+.||.|+||.||++.+  +++.||+|.+...... .     ...+.+.+|++++++++|||++ +.+.   ..
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   82 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-P-----VLAKRTYRELKLLKHLRHENIISLSDIFISPL   82 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-c-----chhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence            44588899999999999999997  4889999975432211 1     1235677899999999999999 2221   11


Q ss_pred             hhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 SAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...        ++|.+++...    .+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++...
T Consensus        83 ~~~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          83 EDIYFVTELLGTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             CcEEEEeehhccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            122        3344444332    3677778889999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......             ......+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       159 ~~~~~~-------------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~  207 (328)
T cd07856         159 DPQMTG-------------YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP  207 (328)
T ss_pred             CCCcCC-------------CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            221100             0011112223322   346789999999999999999977653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.4e-27  Score=198.72  Aligned_cols=185  Identities=19%  Similarity=0.237  Sum_probs=132.0

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC---ch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ---KS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~---~~   89 (260)
                      +.|...+.||+|+||.||+|++  +|++||+|.+.... ....     ....+.+|+.+++.++|+||+ +.+..   ..
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF-QSEI-----FAKRAYRELTLLKHMQHENVIGLLDVFTSAVS   88 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc-cccc-----chhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence            4577899999999999999997  48999999754321 1111     134578899999999999999 32211   10


Q ss_pred             -----hhhhHHHhhccCc---ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 -----AIQTLISNLDSQN---ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 -----~~~~l~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                           ..+.+++++....   ....+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++....
T Consensus        89 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~  168 (342)
T cd07879          89 GDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD  168 (342)
T ss_pred             CCCCceEEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence                 1122334332210   02247888899999999999999999999999999999999999999999999986542


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....             ...+...+.+|+..   ..++.++|+||+|++++++++|+.|+.
T Consensus       169 ~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~  216 (342)
T cd07879         169 AEMT-------------GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK  216 (342)
T ss_pred             CCCC-------------CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence            2111             00111112233332   346788999999999999999988765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.94  E-value=8.9e-27  Score=191.82  Aligned_cols=227  Identities=17%  Similarity=0.168  Sum_probs=152.0

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV----   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~----   86 (260)
                      .+.|++.+.||+|+||.||++..  .++++|+|++....    .     ....+.+|+.+++++ +|||++ +.+.    
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~-----~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----D-----VDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----c-----HHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            45588899999999999999998  48899999853221    1     124567888899988 799999 2221    


Q ss_pred             Cc-----hhh-------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          87 QK-----SAI-------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        87 ~~-----~~~-------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      ..     .++       ++|.+++.... ....+++..++.++.|++.||+|||+++++|+||||+||+++.++.++|+|
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d  171 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD  171 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence            11     111       45555554211 133578889999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCccc---cccccccceeEeecceeeeeccccccccH---HHHHHHH
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT---LQSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWI  227 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~  227 (260)
                      ||++............      ...+..+.+|+.....   ...++.++|+||+|++++++++|+.|+..   .+.....
T Consensus       172 fg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~  245 (291)
T cd06639         172 FGVSAQLTSTRLRRNT------SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKI  245 (291)
T ss_pred             cccchhcccccccccC------ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHH
Confidence            9998765432211100      0111112222211100   12367899999999999999999887652   1222222


Q ss_pred             Hhhcc------ccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYR------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .....      ......+.+++.+|...++..|..
T Consensus       246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  280 (291)
T cd06639         246 PRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS  280 (291)
T ss_pred             hcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC
Confidence            22111      112245678888888888777753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=8.2e-27  Score=190.99  Aligned_cols=183  Identities=19%  Similarity=0.215  Sum_probs=132.5

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |++.+.||+|++|.||+|.+  +++.+++|.+...... +     .....+.+|++++++++|+|++ ++    +....+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-E-----GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-c-----hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEE
Confidence            45678999999999999998  4889999986433221 1     1235678899999999999998 22    221111


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      +++.+++...  ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||.+.......
T Consensus        75 ~v~e~~~~~l~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          75 LVFEFMDTDLYKLIKDR--QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             EEEeccCCCHHHHHHhh--cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            1      4455554443  2357888999999999999999999999999999999999999999999999987664432


Q ss_pred             cccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....      .     .+...| +|+..   ...+.++|+||+|++++++.+|..|+.
T Consensus       153 ~~~~~------~-----~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~  200 (283)
T cd05118         153 RPYTH------Y-----VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP  200 (283)
T ss_pred             ccccC------c-----cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence            10000      0     111122 22222   257889999999999999999976654

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-26  Score=187.49  Aligned_cols=218  Identities=16%  Similarity=0.131  Sum_probs=144.7

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhh-hcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRG-LMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      +.||+|+||.||+|.+  .++.||+|.+....     .........+..|..+ .....|+|++ +++.  .....+.++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSD-----MIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchh-----hhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEE
Confidence            5789999999999998  48899999853221     1111112233444443 4455899999 3322  111222233


Q ss_pred             HhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          96 SNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        96 ~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                      +|+.+..+      ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++........    
T Consensus        77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----  152 (260)
T cd05611          77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK----  152 (260)
T ss_pred             eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecccccc----
Confidence            44333222      13578899999999999999999999999999999999999999999999998865432110    


Q ss_pred             ccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-------ccCCccH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-------RQNRKQF  239 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~~~~  239 (260)
                            ......+.+|+....  ..++.++|+||+|++++++++|..|+.   .....+.......       ...++.+
T Consensus       153 ------~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (260)
T cd05611         153 ------FVGTPDYLAPETILG--VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEA  224 (260)
T ss_pred             ------CCCCcCccChhhhcC--CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHH
Confidence                  001111112221111  336789999999999999999988875   3444444333221       1235677


Q ss_pred             HHHHHHHHHhccccccc
Q psy7935         240 ETVMKTFAEVELRGRKR  256 (260)
Q Consensus       240 ~~il~~l~~~~~~~r~~  256 (260)
                      .+++++|...++..|..
T Consensus       225 ~~~i~~~l~~~p~~R~~  241 (260)
T cd05611         225 VDLINRLLCMDPAKRLG  241 (260)
T ss_pred             HHHHHHHccCCHHHccC
Confidence            99999999999998874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=4.6e-27  Score=193.73  Aligned_cols=219  Identities=14%  Similarity=0.213  Sum_probs=148.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      .++....||+|+||.||++..  +++.||+|.+....        ......+.+|+.+++.++|+|++ +    ......
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   92 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--------QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL   92 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--------hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEE
Confidence            355567899999999999988  48899999753211        11245688999999999999999 2    222222


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ++  +++|+.+..+     ...+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus        93 ~l--v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~  170 (292)
T cd06657          93 WV--VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  170 (292)
T ss_pred             EE--EEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence            22  3333333221     1246888889999999999999999999999999999999999999999999876543221


Q ss_pred             cccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-----
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-----  233 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----  233 (260)
                      ....           ...+.+.| +|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....+.     
T Consensus       171 ~~~~-----------~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T cd06657         171 PRRK-----------SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNL  239 (292)
T ss_pred             cccc-----------ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCc
Confidence            1000           00111222 22222  346789999999999999999988764   22222222222211     


Q ss_pred             -cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..++.+.+++++|...++..|..
T Consensus       240 ~~~~~~l~~li~~~l~~~P~~R~~  263 (292)
T cd06657         240 HKVSPSLKGFLDRLLVRDPAQRAT  263 (292)
T ss_pred             ccCCHHHHHHHHHHHhCCcccCcC
Confidence             12456778888888888887764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=2.4e-26  Score=188.62  Aligned_cols=184  Identities=22%  Similarity=0.264  Sum_probs=128.2

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-E----eCCC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-L----DDVQ   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~----~~~~   87 (260)
                      |++.+.||+|+||.||+|++.  ++++|+|.+...... ..     ....+.+|+.++.++   +|+|++ +    .+..
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~-----~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   74 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EG-----IPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR   74 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-ch-----hhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence            456789999999999999984  899999986433211 11     123455677666555   699998 2    2222


Q ss_pred             c-----hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 K-----SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 ~-----~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      .     .++      +++.+++.... ...+++..++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||+
T Consensus        75 ~~~~~~~~l~~e~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          75 TDRELKLTLVFEHVDQDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             CCCCceeEEEehhcccCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence            1     111      33444443322 23478899999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +..........           ...+...+.+|+..  ..++.++|+||+|+++++++++..|+.
T Consensus       154 ~~~~~~~~~~~-----------~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~  207 (287)
T cd07838         154 ARIYSFEMALT-----------SVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR  207 (287)
T ss_pred             ceeccCCcccc-----------cccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence            87654332110           00011112233322  456788999999999999999866654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=7e-27  Score=190.24  Aligned_cols=230  Identities=18%  Similarity=0.211  Sum_probs=149.3

Q ss_pred             cCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCc--hhhHHHHHHHHHHHHhhhcc-cCCCCeE-E----eCC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHP--KLDEALTKERITSEIRGLMK-CRMADIC-L----DDV   86 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~e~~~l~~-~~h~~i~-~----~~~   86 (260)
                      |++.+.||+|+||.||+|.+.   ++.+++|.+........  ..........+.+|+.++.+ ++|||++ +    .+.
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            667899999999999999984   57899998654322111  01112223557788887764 7999999 2    222


Q ss_pred             Cchhh-------hhHHHhhccC-cccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          87 QKSAI-------QTLISNLDSQ-NITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      ...++       ++|.+++... .....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  161 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA  161 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence            22222       2344443221 002347888899999999999999996 68999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-  233 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-  233 (260)
                      ..........       ....+..+.+|....  ...++.++|+||+|++++++++|..|+.   .............. 
T Consensus       162 ~~~~~~~~~~-------~~~~~~~~~~Pe~~~--~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  232 (269)
T cd08528         162 KQKQPESKLT-------SVVGTILYSCPEIVK--NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP  232 (269)
T ss_pred             eecccccccc-------cccCcccCcChhhhc--CCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc
Confidence            7654332100       011111122222111  1446789999999999999999987765   22222232222111 


Q ss_pred             ----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ..++.+.+++.+|...++..|..
T Consensus       233 ~~~~~~~~~l~~li~~cl~~~p~~Rp~  259 (269)
T cd08528         233 LPEGMYSEDVTDVITSCLTPDAEARPD  259 (269)
T ss_pred             CCcccCCHHHHHHHHHHCCCCCccCCC
Confidence                22456777788877777777753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=2.1e-26  Score=187.49  Aligned_cols=185  Identities=15%  Similarity=0.169  Sum_probs=119.4

Q ss_pred             eeccCCceeEEEEEEc-C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh--
Q psy7935          23 CFKQGAEGRIFKTEYL-G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI--   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~--   91 (260)
                      .||+|+||.||+|... +   ..+++|......       .......+.+|+.+++.++|||++ +.+    ....++  
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-------SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-------ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEE
Confidence            6899999999999752 2   345566532211       111246789999999999999999 332    222222  


Q ss_pred             -----hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          92 -----QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        92 -----~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                           ++|.+++..... ....+...+..++.|++.||+|||+++++||||||+|||++.++.++|+|||++........
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~  154 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY  154 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh
Confidence                 566666643211 23456677788999999999999999999999999999999999999999998754221110


Q ss_pred             ccccccccccceeeeeeeeeecCcc-----ccccccccceeEeecceeeeeccc-cccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKG-----TLQSYNHHLVMIDFGLSQIKVSTE-DKAV  218 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~di~s~g~~~~~~~~~-~~~~  218 (260)
                      ....    .....+..+.+|+....     ....++.++|+||||+++++++++ ..|+
T Consensus       155 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  209 (268)
T cd05086         155 IETE----DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPY  209 (268)
T ss_pred             hhcc----cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Confidence            0000    00000111112211100     012357789999999999999864 3344

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=1.1e-26  Score=188.94  Aligned_cols=222  Identities=15%  Similarity=0.138  Sum_probs=145.2

Q ss_pred             CcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhh--
Q psy7935          19 QPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAI--   91 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~--   91 (260)
                      .....||+|+||.||+|++.  +..|++|.+..+.        ....+.+.+|+.++++++|+||+ +.+.  .....  
T Consensus        11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   82 (268)
T cd06624          11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--------SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI   82 (268)
T ss_pred             CceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence            33578999999999999974  6789999754321        11235788999999999999999 3322  11122  


Q ss_pred             -------hhHHHhhccCcccccc--hHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeeccccccc
Q psy7935          92 -------QTLISNLDSQNITREN--ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKV  161 (260)
Q Consensus        92 -------~~l~~~l~~~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~  161 (260)
                             ++|.+++....  ..+  ++..+..++.|++.||+|||++||+||||||+||+++. ++.++|+|||++....
T Consensus        83 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~  160 (268)
T cd06624          83 FMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA  160 (268)
T ss_pred             EEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence                   45555554321  123  77778889999999999999999999999999999986 6799999999986543


Q ss_pred             ccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccH----H-HHHHHH-Hh---hcc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDF----R-DMFNWI-LS---SYR  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~----~-~~~~~~-~~---~~~  232 (260)
                      ...... ..     ...+..+.+|+........++.++|+||+|++++++++|..|+..    . ...... ..   ..+
T Consensus       161 ~~~~~~-~~-----~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (268)
T cd06624         161 GINPCT-ET-----FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIP  234 (268)
T ss_pred             cCCCcc-cc-----CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCC
Confidence            221100 00     001111112221111112367889999999999999999877641    1 111111 11   122


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....+.+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~li~~~l~~~p~~Rpt  258 (268)
T cd06624         235 ESLSAEAKNFILRCFEPDPDKRAS  258 (268)
T ss_pred             cccCHHHHHHHHHHcCCCchhCCC
Confidence            233456677888888777777753

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.94  E-value=1.1e-26  Score=195.01  Aligned_cols=199  Identities=19%  Similarity=0.199  Sum_probs=132.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCch------hhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPK------LDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~------~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      ..+.+.||+|+||.||+|.+  .++.||||.+.........      .........+.+|++++++++|+|++ +.+   
T Consensus        11 ~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   90 (335)
T PTZ00024         11 IQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYV   90 (335)
T ss_pred             hhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEe
Confidence            34557899999999999997  4889999986433221100      00000112577899999999999998 222   


Q ss_pred             -CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 -VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 -~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       ....++      +++.+++...   ..+++.....++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        91 ~~~~~~lv~e~~~~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~  167 (335)
T PTZ00024         91 EGDFINLVMDIMASDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR  167 (335)
T ss_pred             cCCcEEEEEeccccCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence             221112      4444544332   247888899999999999999999999999999999999999999999999987


Q ss_pred             cccccccc---cccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDK---AVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........   ..+.............+.+.| +|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~  235 (335)
T PTZ00024        168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFP  235 (335)
T ss_pred             ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            65421100   000000000000111112223 33333   236788999999999999999877654

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.94  E-value=2e-26  Score=185.86  Aligned_cols=223  Identities=19%  Similarity=0.265  Sum_probs=157.6

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~~   90 (260)
                      |++.+.||.|++|.||++.+.  +.++++|++......      ......+.+|+++++.++|+|++ +    .+.....
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~   75 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS------EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLC   75 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC------hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEE
Confidence            567899999999999999985  899999986443221      12245688999999999999998 2    2222222


Q ss_pred             h-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 I-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      +       ++|.+++..... ...+++..+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||.+.....
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            2       355555544210 24688999999999999999999999999999999999999999999999999876544


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc----cc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY----RR  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~  233 (260)
                      .....          ....+...+.+|+..  ...+.++|+||+|++++++.++..|++   ..++........    +.
T Consensus       156 ~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  225 (258)
T cd08215         156 TVDLA----------KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPS  225 (258)
T ss_pred             Cccee----------cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCC
Confidence            32110          001111112233322  446788999999999999999988865   344444444322    22


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~  248 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPS  248 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcC
Confidence            23456678888888888777764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG1152|consensus

Probab=99.94  E-value=3.1e-27  Score=199.23  Aligned_cols=182  Identities=16%  Similarity=0.210  Sum_probs=139.1

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHH---HHHHHHHhhhcccC---CCCeE----EeC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTK---ERITSEIRGLMKCR---MADIC----LDD   85 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~---~~~~~e~~~l~~~~---h~~i~----~~~   85 (260)
                      |..++.+|.|+||.|+.|.++  ..+|+||.+++...-   .+.|...   -.+-.|+.++..++   |+||+    |++
T Consensus       563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL---~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERIL---VDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             ceeeeeccccccceEEEeeecccceEEEeeehhhhhhh---hhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            888999999999999999994  789999987655421   1222111   13556999999998   99999    444


Q ss_pred             CCchh-h--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 VQKSA-I--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 ~~~~~-~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      .++++ +        -+|++|++.+.   .+++.++..|+.|++.|+++||++||+|||||-+|+.++++|.+||+|||.
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs  716 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS  716 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence            43333 3        78999998764   799999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      +....+.            .+..++++..+.+|+.+   .+....-|||++|+.+|-++...-|
T Consensus       717 aa~~ksg------------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp  768 (772)
T KOG1152|consen  717 AAYTKSG------------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP  768 (772)
T ss_pred             hhhhcCC------------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence            8544332            12234444444455444   3455668999999999988776444

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=1.3e-26  Score=191.44  Aligned_cols=229  Identities=17%  Similarity=0.210  Sum_probs=150.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--Q   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~   87 (260)
                      ..+.|++.+.||+|++|.||+|.+.  ++.||||.+......       .....+..|+.++.+. .|+||+ +++.  .
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~   85 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-------EENKRILMDLDVVLKSHDCPYIVKCYGYFIT   85 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-------HHHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence            3455888999999999999999985  899999986432211       1134566677766666 499999 2221  1


Q ss_pred             chhhhhHHHhhccCc------ccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAIQTLISNLDSQN------ITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~------~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ....+.+++++....      ....+++..+..++.|++.||+|||+ ++|+||||+|+||+++.++.+||+|||++...
T Consensus        86 ~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~  165 (296)
T cd06618          86 DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL  165 (296)
T ss_pred             CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence            112222344432210      02357888888999999999999997 59999999999999999999999999998655


Q ss_pred             cccccccccccccccceeeeeeeeeecCccc--cccccccceeEeecceeeeeccccccccH----HHHHHHHHhhccc-
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT--LQSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSYRR-  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-  233 (260)
                      ........       ...+..+.+|+.....  ...++.++|+||||++++++++|..|+..    .+...+.+..... 
T Consensus       166 ~~~~~~~~-------~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (296)
T cd06618         166 VDSKAKTR-------SAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS  238 (296)
T ss_pred             cCCCcccC-------CCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC
Confidence            33221110       0011112222211111  13467899999999999999999888763    2233333332211 


Q ss_pred             -----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                           ..+..+.+++.+|...++..|..
T Consensus       239 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~  266 (296)
T cd06618         239 LPPNEGFSPDFCSFVDLCLTKDHRKRPK  266 (296)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence                 12345678888888888877754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=4.6e-26  Score=186.67  Aligned_cols=183  Identities=17%  Similarity=0.230  Sum_probs=130.5

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----EeCCCch
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----LDDVQKS   89 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~~~~~~   89 (260)
                      |++.+.||+|++|.||+|+.  +++.|+||.+..+...       .......+|+..+.+++ |+|++     +.+....
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   73 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-------WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDEL   73 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-------hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcE
Confidence            45678999999999999998  4788999985433211       01233557889999998 99998     3332222


Q ss_pred             hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ++      +++.+++.... ...+++..+..++.|++.+|.|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus        74 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~  152 (283)
T cd07830          74 YFVFEYMEGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR  152 (283)
T ss_pred             EEEEecCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence            22      44555554332 235788999999999999999999999999999999999999999999999998765432


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....       ..    ....+.+|+..   ..++.++|+||||++++++++|..|+.
T Consensus       153 ~~~~~-------~~----~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~  200 (283)
T cd07830         153 PPYTD-------YV----STRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFP  200 (283)
T ss_pred             CCcCC-------CC----CcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccC
Confidence            11100       00    11112223322   346789999999999999999976653

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG4257|consensus

Probab=99.94  E-value=8.1e-27  Score=198.40  Aligned_cols=215  Identities=18%  Similarity=0.231  Sum_probs=160.8

Q ss_pred             cCcceeeccCCceeEEEEEEc----Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL----GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~----~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~   87 (260)
                      ..+.+.||.|-||.||+|...    |+  .||||..+. ..      .....+.|+.|.-+++.+.||||+    .+...
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~-d~------t~d~tekflqEa~iMrnfdHphIikLIGv~~e~  463 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKT-DC------TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ  463 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhcc-CC------ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc
Confidence            556789999999999999973    33  567775321 11      112367899999999999999999    33333


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...+       |.|.+|++.+.  ..++...+..++.|++.||.|||+.+++||||-.+|||+.+...+||+|||+++-.
T Consensus       464 P~WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~  541 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYL  541 (974)
T ss_pred             ceeEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhc
Confidence            3333       99999998763  45888888889999999999999999999999999999999999999999999876


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccc---------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDK---------------------  216 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~---------------------  216 (260)
                      .+..-+.     +...-    ...-|++|+..  ..++.++|+|=||+.+||++. |.+                     
T Consensus       542 ed~~yYk-----aS~~k----LPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP  612 (974)
T KOG4257|consen  542 EDDAYYK-----ASRGK----LPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLP  612 (974)
T ss_pred             cccchhh-----ccccc----cceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCC
Confidence            5542111     11000    01114455655  568999999999999999865 332                     


Q ss_pred             -----cccHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         217 -----AVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       217 -----~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                           |+.+..++.+||. |.+..||.+.++...|.++..
T Consensus       613 ~P~nCPp~LYslmskcWa-yeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  613 CPPNCPPALYSLMSKCWA-YEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             CCCCCChHHHHHHHHHhc-cCcccCCcHHHHHHHHHHHHH
Confidence                 4447799999999 555558999888887766544

>KOG0603|consensus

Probab=99.94  E-value=2.1e-27  Score=202.64  Aligned_cols=217  Identities=17%  Similarity=0.157  Sum_probs=154.9

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCCC--chh
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDVQ--KSA   90 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~~--~~~   90 (260)
                      .|+....+|.|+|+.|-.+.+  +++..++|++..+.            ....+|+.++... .|||++ ..+..  ...
T Consensus       323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~  390 (612)
T KOG0603|consen  323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKE  390 (612)
T ss_pred             hhccccccCCCCccceeeeeccccccchhheeccccc------------cccccccchhhhhcCCCcceeecceecCCce
Confidence            366678899999999999998  48899999864331            1234566655555 799999 33322  223


Q ss_pred             hhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE-ccCCcEEEEeecccccccccc
Q psy7935          91 IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill-~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ++-+++.++++.+     .......++..|+.+|+.|+.|||++||+||||||+|||+ +++++++|+|||.++..+...
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~  470 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC  470 (612)
T ss_pred             eeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence            3556676666544     1112226777799999999999999999999999999999 689999999999998776652


Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc----HHHHHHHHHhhc-cccCCccH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSY-RRQNRKQF  239 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~  239 (260)
                      ..         ..++..+.+|+...  ...++++.|+||+|+++|+|++|+-|+.    -.++..++..+. ....+..+
T Consensus       471 ~t---------p~~t~~y~APEvl~--~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~A  539 (612)
T KOG0603|consen  471 DT---------PALTLQYVAPEVLA--IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEA  539 (612)
T ss_pred             cc---------cchhhcccChhhhc--cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHH
Confidence            11         01122222222222  3678999999999999999999998877    224444444331 14446778


Q ss_pred             HHHHHHHHHhccccccc
Q psy7935         240 ETVMKTFAEVELRGRKR  256 (260)
Q Consensus       240 ~~il~~l~~~~~~~r~~  256 (260)
                      .+++++|..+++..|..
T Consensus       540 KdLl~~LL~~dP~~Rl~  556 (612)
T KOG0603|consen  540 KDLLQQLLQVDPALRLG  556 (612)
T ss_pred             HHHHHHhccCChhhCcC
Confidence            99999999999988875

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.94  E-value=2.4e-26  Score=185.48  Aligned_cols=220  Identities=16%  Similarity=0.212  Sum_probs=152.1

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~   90 (260)
                      |++.+.||+|+||.||++++  +++.+++|.+......      ......+.+|++++++++|+|++     +.+....+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS------QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLC   75 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc------HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEE
Confidence            66789999999999999987  4789999985432211      11245678899999999999999     23222222


Q ss_pred             h-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 I-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      +       ++|.+++..... ...+++..++.++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++.....
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence            2       334444432110 23578888899999999999999999999999999999999999999999999876644


Q ss_pred             cccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc---
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR---  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---  233 (260)
                      ..... .            .+.+.| +|+..  ..++.++|+||+|++++++++|..|++   ..+...........   
T Consensus       156 ~~~~~-~------------~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T cd08530         156 NMAKT-Q------------IGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIP  222 (256)
T ss_pred             CCccc-c------------cCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCc
Confidence            31110 0            011112 22222  346778999999999999999988866   33333333332211   


Q ss_pred             -cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                       ..+.++.+++.+|...++..|..
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~  246 (256)
T cd08530         223 PIYSQDLQNFIRSMLQVKPKLRPN  246 (256)
T ss_pred             hhhCHHHHHHHHHHcCCCcccCCC
Confidence             12345678888888777777754

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3e-26  Score=184.58  Aligned_cols=219  Identities=15%  Similarity=0.191  Sum_probs=151.3

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |++.+.||+|++|.||++++  .++++++|.+......      ......+.+|++++++++|+|++ +.    +....+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK------EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLY   75 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC------HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEE
Confidence            56789999999999999987  4789999986543221      11246789999999999999998 22    221111


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++...   ..+++..+..++.|++.|+.+||++|++||||+|+||+++.++.++|+|||.+......
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  152 (254)
T cd06627          76 IILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV  152 (254)
T ss_pred             EEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence            1       3455554433   35788999999999999999999999999999999999999999999999998766443


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHH----HHHHHHHhhcc---c
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR----DMFNWILSSYR---R  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~  233 (260)
                      .....           ...+...| +|+..  ...+.++|+||+|++++++++|..|+...    ...+......+   .
T Consensus       153 ~~~~~-----------~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T cd06627         153 SKDDA-----------SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPE  221 (254)
T ss_pred             ccccc-----------ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCC
Confidence            22100           00111112 22222  23678899999999999999998876521    11111111111   1


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..+.+++.+|...++..|..
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~~  244 (254)
T cd06627         222 GISPELKDFLMQCFQKDPNLRPT  244 (254)
T ss_pred             CCCHHHHHHHHHHHhCChhhCcC
Confidence            22356677888888777777753

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.1e-26  Score=183.55  Aligned_cols=216  Identities=19%  Similarity=0.216  Sum_probs=153.5

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhh-----
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAI-----   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~-----   91 (260)
                      ||+|+||.||++.+.  ++.+++|++......     .......+.+|++++++++|+|++     +.+....++     
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII-----KRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhc-----chHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecC
Confidence            689999999999984  889999986543322     112245688999999999999999     222222122     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD  169 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d  169 (260)
                        ++|.+++....   .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||++.......... .
T Consensus        76 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~-~  151 (250)
T cd05123          76 PGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRT-N  151 (250)
T ss_pred             CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcc-c
Confidence              55666665432   57889999999999999999999999999999999999999999999999987654331100 0


Q ss_pred             ccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cccCCccHHH
Q psy7935         170 LYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQNRKQFET  241 (260)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~  241 (260)
                           .......    +.+|+..  ...+.++|+||+|++++++++|..|+.   ..+....+....   +...+..+.+
T Consensus       152 -----~~~~~~~----~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  222 (250)
T cd05123         152 -----TFCGTPE----YLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARD  222 (250)
T ss_pred             -----CCcCCcc----ccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence                 0011111    1222222  336788999999999999999988876   234444444322   2222567799


Q ss_pred             HHHHHHHhcccccccc
Q psy7935         242 VMKTFAEVELRGRKRC  257 (260)
Q Consensus       242 il~~l~~~~~~~r~~~  257 (260)
                      ++++|...++..|...
T Consensus       223 ~i~~~l~~~p~~R~~~  238 (250)
T cd05123         223 LISGLLQKDPTKRLGS  238 (250)
T ss_pred             HHHHHhcCCHhhCCCc
Confidence            9999999888888753

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.94  E-value=3.3e-26  Score=188.19  Aligned_cols=222  Identities=18%  Similarity=0.242  Sum_probs=151.0

Q ss_pred             cCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee----CC
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD----DV   86 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~----~~   86 (260)
                      |++.+.||+|++|.||++++     .++++|+|.+.....    .........+.+|++++.++ .|+|++ +.    ..
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~   77 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI----VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD   77 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH----HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC
Confidence            56689999999999999986     367899998543211    11112245688899999999 589998 22    11


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||+.+++||||+|+||+++.++.++|+|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~  154 (288)
T cd05583          78 TKLHLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKE  154 (288)
T ss_pred             CEEEEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence            22212       3444444322   3477888888999999999999999999999999999999999999999999866


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc----ccccccceeEeecceeeeecccccccc-------HHHHHHHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWI  227 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~  227 (260)
                      ..........         .. .+...| +|+..    ...+.++|+||+|++++++++|..|+.       ..++...+
T Consensus       155 ~~~~~~~~~~---------~~-~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~  224 (288)
T cd05583         155 FLAEEEERAY---------SF-CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRI  224 (288)
T ss_pred             cccccccccc---------cc-cCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHH
Confidence            5333211100         00 111222 23322    235788999999999999999988763       23333443


Q ss_pred             Hhhcc---ccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYR---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....+   ...++.+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t  256 (288)
T cd05583         225 LKSKPPFPKTMSAEARDFIQKLLEKDPKKRLG  256 (288)
T ss_pred             HccCCCCCcccCHHHHHHHHHHhcCCHhhccC
Confidence            33322   223466788888888888887764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.5e-26  Score=194.99  Aligned_cols=181  Identities=22%  Similarity=0.262  Sum_probs=132.2

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|+..+.||+|++|.||+|++.  ++.||+|++.... .     .......+.+|+.++++++|+|++     +.....
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-Q-----SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS   88 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-c-----hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence            34788999999999999999984  7899999753221 1     111235577899999999999998     211111


Q ss_pred             ------hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          89 ------SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        89 ------~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                            .++      ++|.+++...    .+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||+
T Consensus        89 ~~~~~~~~lv~e~~~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~  164 (343)
T cd07851          89 LEDFQDVYLVTHLMGADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGL  164 (343)
T ss_pred             ccccccEEEEEecCCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccc
Confidence                  111      3455555432    478889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +..........         .    ....+.+|+..   ...+.++|+||+|++++++++|..|+.
T Consensus       165 ~~~~~~~~~~~---------~----~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~  217 (343)
T cd07851         165 ARHTDDEMTGY---------V----ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP  217 (343)
T ss_pred             cccccccccCC---------c----ccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            87653321100         0    01111223222   256789999999999999999987764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=5.1e-26  Score=186.20  Aligned_cols=183  Identities=21%  Similarity=0.246  Sum_probs=132.5

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |+..+.||+|.+|.||+|+..  ++++++|.+...... ..     ..+.+.+|+.++++++|+|++ +.    +....+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EG-----IPSTALREISLLKELKHPNIVKLLDVIHTERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc-cc-----ccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceE
Confidence            345688999999999999984  899999986543211 11     134577899999999999999 22    221111


Q ss_pred             h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +      ++|.+++....  ..+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++.......
T Consensus        75 ~v~e~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          75 LVFEYCDMDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             EEecCcCcCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence            1      45666665431  358899999999999999999999999999999999999999999999999987654322


Q ss_pred             cccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....      ..     .....| +|+..   ..++.++|+||+|+++++++++..|+.
T Consensus       153 ~~~~------~~-----~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~  200 (282)
T cd07829         153 RTYT------HE-----VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFP  200 (282)
T ss_pred             cccC------cc-----ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCC
Confidence            1100      00     011122 22222   257788999999999999999977665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=5.5e-26  Score=182.53  Aligned_cols=217  Identities=24%  Similarity=0.352  Sum_probs=152.6

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~   90 (260)
                      |+..+.||+|++|.||++.+.  ++.+++|++.....        .....+.+|++.+++++|+|++ +.    ......
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   73 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--------EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELW   73 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence            567899999999999999985  88999998643221        1246788999999999999998 22    222222


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       .+|.+++....  ..+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||.+......
T Consensus        74 l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          74 IVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            2       44555544431  35788899999999999999999999999999999999999999999999998765443


Q ss_pred             ccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHH---HHHHHHHhhc----cc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR---DMFNWILSSY----RR  233 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~  233 (260)
                      ....           . ..+...| +|+..  ...+.++|+||+|++++++++|..|+...   +.........    ..
T Consensus       152 ~~~~-----------~-~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  219 (253)
T cd05122         152 KARN-----------T-MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRN  219 (253)
T ss_pred             cccc-----------c-eecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCc
Confidence            2100           0 0111122 22222  33678899999999999999998876622   2222221111    11


Q ss_pred             cC--CccHHHHHHHHHHhccccccc
Q psy7935         234 QN--RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~--~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..  +..+.+++.+|...++..|..
T Consensus       220 ~~~~~~~~~~~i~~~l~~~p~~R~t  244 (253)
T cd05122         220 PEKWSDEFKDFLKKCLQKNPEKRPT  244 (253)
T ss_pred             ccccCHHHHHHHHHHccCChhhCCC
Confidence            11  455688888888888777753

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG1025|consensus

Probab=99.93  E-value=4.3e-26  Score=199.05  Aligned_cols=212  Identities=18%  Similarity=0.274  Sum_probs=153.2

Q ss_pred             CcceeeccCCceeEEEEEE--c----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC---c
Q psy7935          19 QPAECFKQGAEGRIFKTEY--L----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ---K   88 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~--~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~---~   88 (260)
                      .-.++||+|+||.||+|.+  .    +-+||+|++....  .++     ....+++|+-++.++.|||++ +.+..   .
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~-----~s~e~LdeAl~masldHpnl~RLLgvc~~s~  771 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPK-----ASIELLDEALRMASLDHPNLLRLLGVCMLST  771 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--Cch-----hhHHHHHHHHHHhcCCCchHHHHhhhcccch
Confidence            3468999999999999998  2    5689999854332  121     246799999999999999999 32221   1


Q ss_pred             hh-------hhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SA-------IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~-------~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .-       +|.|.||++...  ..+-...++.|..||+.|++|||+++++||||-++|+|+..-.++||.|||+++...
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence            11       189999987653  346667777899999999999999999999999999999999999999999998875


Q ss_pred             ccccccccccccccceeeeeeeeeecCcc---ccccccccceeEeecceeeeeccc-ccccc------------------
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKG---TLQSYNHHLVMIDFGLSQIKVSTE-DKAVD------------------  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~di~s~g~~~~~~~~~-~~~~~------------------  219 (260)
                      .....    |.     ...+-+...|.+-   ....++.++|+||||+..||++|. ..|.+                  
T Consensus       850 ~d~~e----y~-----~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLs  920 (1177)
T KOG1025|consen  850 PDEKE----YS-----APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLS  920 (1177)
T ss_pred             ccccc----cc-----ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCC
Confidence            54321    11     1112223344332   236799999999999999999883 33322                  


Q ss_pred             --------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 --------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                              ...++-+||. .+...|+.+.++...+.+.
T Consensus       921 qPpiCtiDVy~~mvkCwm-id~~~rp~fkel~~~fs~~  957 (1177)
T KOG1025|consen  921 QPPICTIDVYMVMVKCWM-IDADSRPTFKELAEEFSRM  957 (1177)
T ss_pred             CCCCccHHHHHHHHHHhc-cCcccCccHHHHHHHHHHH
Confidence                    3455666666 3344577777777766543

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.93  E-value=6.6e-26  Score=182.80  Aligned_cols=220  Identities=18%  Similarity=0.199  Sum_probs=153.4

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc--hh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK--SA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~--~~   90 (260)
                      |+..+.||+|++|.||+|.+.  ++.|++|+.......      ....+.+.+|++.+++++|+|++ +.+.  ..  ..
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS------EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT   75 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCe
Confidence            556789999999999999985  889999986443221      12346788999999999999999 2221  11  22


Q ss_pred             h---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          91 I---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        91 ~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .         ++|.+++....   .+++..+..++.|++.||+|||+++++|+||+|+||+++.++.++|+|||.+....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~  152 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLG  152 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence            2         45555554432   68889999999999999999999999999999999999999999999999987665


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccccHH----HHHHHHHh-----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFR----DMFNWILS-----  229 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~----~~~~~~~~-----  229 (260)
                      .........         .......| +|+..  ...+.++|+||+|++++++++|..|+...    ........     
T Consensus       153 ~~~~~~~~~---------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd06606         153 DIETGEGTG---------SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPP  223 (260)
T ss_pred             ccccccccc---------CCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCc
Confidence            443210000         00111122 22222  33788999999999999999998876522    11111111     


Q ss_pred             hccccCCccHHHHHHHHHHhcccccc
Q psy7935         230 SYRRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       230 ~~~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..+...++.+.+++.+|...++..|.
T Consensus       224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp  249 (260)
T cd06606         224 EIPEHLSEEAKDFLRKCLRRDPKKRP  249 (260)
T ss_pred             CCCcccCHHHHHHHHHhCcCChhhCC
Confidence            11222345678888888777777775

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0671|consensus

Probab=99.93  E-value=1.1e-25  Score=181.59  Aligned_cols=189  Identities=16%  Similarity=0.197  Sum_probs=143.4

Q ss_pred             eeeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC--C---C
Q psy7935           8 FKITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM--A---D   80 (260)
Q Consensus         8 ~~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~---~   80 (260)
                      |+......++|+++..+|+|+||.|..+.++  +..||||++..         -...+++.+-|+++++++.+  |   +
T Consensus        81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------V~kYreAa~iEi~vLqki~~~DP~g~~  151 (415)
T KOG0671|consen   81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN---------VDKYREAALIEIEVLQKINESDPNGKF  151 (415)
T ss_pred             EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHH---------HHHHhhHHHHHHHHHHHHHhcCCCCce
Confidence            4566666788999999999999999999984  78999997431         11135677889999999942  1   2


Q ss_pred             eE-----EeCCCch-hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---
Q psy7935          81 IC-----LDDVQKS-AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---  145 (260)
Q Consensus        81 i~-----~~~~~~~-~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---  145 (260)
                      -+     |++..+. ++      .++++|+..++ -.+++.+.+..++.|++++++|||+.+++|-||||+|||+.+   
T Consensus       152 rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~  230 (415)
T KOG0671|consen  152 RCVQMRDWFDYRGHICIVFELLGLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY  230 (415)
T ss_pred             EEEeeehhhhccCceEEEEeccChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence            22     4554332 22      48999998876 556899999999999999999999999999999999999975   


Q ss_pred             -----------------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecc
Q psy7935         146 -----------------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGL  206 (260)
Q Consensus       146 -----------------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~  206 (260)
                                       +..++++|||.|+......             .+++.+..+.+|+..  ..++...|+||+||
T Consensus       231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGC  297 (415)
T KOG0671|consen  231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-------------STIVSTRHYRAPEVILGLGWSQPCDVWSIGC  297 (415)
T ss_pred             EEEeccCCccceeccCCCcceEEEecCCcceeccCc-------------ceeeeccccCCchheeccCcCCccCceeeee
Confidence                             2468999999987654432             133344444444444  45788899999999


Q ss_pred             eeeeecccccccc
Q psy7935         207 SQIKVSTEDKAVD  219 (260)
Q Consensus       207 ~~~~~~~~~~~~~  219 (260)
                      ++.|+-+|..-++
T Consensus       298 IL~ElytG~~LFq  310 (415)
T KOG0671|consen  298 ILVELYTGETLFQ  310 (415)
T ss_pred             EEEEeeccceecc
Confidence            9999999965433

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=1.6e-25  Score=198.65  Aligned_cols=111  Identities=18%  Similarity=0.191  Sum_probs=74.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccccccc------cccccccccceeeee
Q psy7935         109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVSTEDK------AVDLYVLKRNLTTII  181 (260)
Q Consensus       109 ~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~~~~------~~d~~~~~~~~~~~~  181 (260)
                      ...+..++.|++.||.|||+++|+||||||+|||++. ++.+||+|||+++........      .+..|..++.+....
T Consensus       254 ~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~  333 (566)
T PLN03225        254 NKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMST  333 (566)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccC
Confidence            4556779999999999999999999999999999996 689999999999755332211      122233333221000


Q ss_pred             eeee--------ecCcccc-ccccccceeEeecceeeeecccccccc
Q psy7935         182 VVAY--------CWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       182 ~~~~--------~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....        .+++... ..++.+.|+||+||++++++++..+.+
T Consensus       334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~  380 (566)
T PLN03225        334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD  380 (566)
T ss_pred             CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc
Confidence            0000        0001101 235567899999999999998766544

>KOG0612|consensus

Probab=99.93  E-value=6.2e-27  Score=210.10  Aligned_cols=217  Identities=12%  Similarity=0.138  Sum_probs=155.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .++|++++.||+|+||.|..+++  +++.+|+|++.+-.     ......-..|..|-.++.--+.+=|+     |.|..
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e-----MlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE-----MLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH-----HhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence            35689999999999999999998  48899999753211     11122234577777777766655555     44433


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                        ++|.||||+.++.+      -..++++++..++..|+.||.-||+.|.|||||||+|||||..|++||+|||.+-.+.
T Consensus       149 --~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  149 --YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             --ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence              44558888877665      1158999999999999999999999999999999999999999999999999886554


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeeccccccccHHHH---HHHHHhh-
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDM---FNWILSS-  230 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~---~~~~~~~-  230 (260)
                      ......++         ..++++.+.+|+.+       +.|.+..|.||+|+++|||+.|.-|+..+.+   ..+++.. 
T Consensus       227 ~dG~V~s~---------~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk  297 (1317)
T KOG0612|consen  227 ADGTVRSS---------VAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK  297 (1317)
T ss_pred             CCCcEEec---------cccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh
Confidence            33222111         22333334444433       6789999999999999999999999985443   4455543 


Q ss_pred             ----cc--ccCCccHHHHHHHHH
Q psy7935         231 ----YR--RQNRKQFETVMKTFA  247 (260)
Q Consensus       231 ----~~--~~~~~~~~~il~~l~  247 (260)
                          .|  ...+....+++..|.
T Consensus       298 ~~l~FP~~~~VSeeakdLI~~ll  320 (1317)
T KOG0612|consen  298 ESLSFPDETDVSEEAKDLIEALL  320 (1317)
T ss_pred             hhcCCCcccccCHHHHHHHHHHh
Confidence                12  122345567777665

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=2.5e-25  Score=181.08  Aligned_cols=210  Identities=13%  Similarity=0.173  Sum_probs=142.0

Q ss_pred             cCcceee--ccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCCC
Q psy7935          18 LQPAECF--KQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDVQ   87 (260)
Q Consensus        18 ~~~~~~l--g~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~~   87 (260)
                      +++.+.+  |+|+||.||+++.  ++..+++|.+..+....             .|+.....+ +|+|++     +....
T Consensus        16 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------~e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390         16 CEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------------IEPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             hccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------------hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence            4445555  9999999999997  48889999864432211             011111112 699998     22222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeeccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQI  159 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~  159 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+||+++.++ .++|+|||++..
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~  159 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI  159 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence            2222       4555555443   2688999999999999999999999999999999999999988 999999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH--------HHHHHHHHh
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF--------RDMFNWILS  229 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~--------~~~~~~~~~  229 (260)
                      ........          .+..    +.+|+..  ..+++++|+||+|++++++++|..|+..        ..+......
T Consensus       160 ~~~~~~~~----------~~~~----y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  225 (267)
T PHA03390        160 IGTPSCYD----------GTLD----YFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK  225 (267)
T ss_pred             cCCCccCC----------CCCc----ccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc
Confidence            43321110          1111    2223322  4567889999999999999999988751        112121111


Q ss_pred             --hccccCCccHHHHHHHHHHhcccccccc
Q psy7935         230 --SYRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       230 --~~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                        ..+...++.+.+++.+|...++..|..+
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  255 (267)
T PHA03390        226 KLPFIKNVSKNANDFVQSMLKYNINYRLTN  255 (267)
T ss_pred             cCCcccccCHHHHHHHHHHhccChhhCCch
Confidence              1112345778999999999999999753

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.92  E-value=1.3e-25  Score=181.84  Aligned_cols=225  Identities=17%  Similarity=0.187  Sum_probs=147.0

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      +|.+.+.||+|+||.||++++.  +..+++|....-....  .. ......+..|+.++++++|||++     +.+....
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   77 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGE--LN-PNETVQANQEAQLLSKLDHPAIVKFHASFLERDAF   77 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccc--cC-cchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCce
Confidence            3667899999999999999984  4556666533211111  11 11124566789999999999999     2222222


Q ss_pred             hh-------hhHHHhhccC-cccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQ-NITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++... .....+++..++.++.|++.||.|||++|++|+||+|+||+++. +.++|+|||++....
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecC
Confidence            22       3344433221 11235788999999999999999999999999999999999985 679999999986653


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY----  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~----  231 (260)
                      .......           ...+.+.| +|+..  ..++.++|+||+|+++++++++..|+.   ..+.......+.    
T Consensus       157 ~~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (260)
T cd08222         157 GSCDLAT-----------TFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL  225 (260)
T ss_pred             CCccccc-----------CCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC
Confidence            3221110           00111122 22222  345678999999999999999988766   223333333222    


Q ss_pred             cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +...++.+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~  250 (260)
T cd08222         226 PETYSRQLNSIMQSMLNKDPSLRPS  250 (260)
T ss_pred             cchhcHHHHHHHHHHhcCChhhCcC
Confidence            1222456778888888888887754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0665|consensus

Probab=99.92  E-value=1.2e-25  Score=177.56  Aligned_cols=195  Identities=18%  Similarity=0.208  Sum_probs=143.6

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~~   89 (260)
                      .+|..+..+|.|.- .|..+.+  .+++||+|..-..      +..+...++..+|...+..++|+||+    ++.....
T Consensus        17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p------f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~   89 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP------FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT   89 (369)
T ss_pred             eeeeeecccCCCCc-eEEecchhhccCceehhhhcCc------cccCccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence            45777889999998 7888887  4999999974332      22233456788999999999999999    3333333


Q ss_pred             hh-----hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-----QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-----~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..     |.+++++..+--   .-.++-..+..++.|++.|++|||+.||+||||||+||++..++.+||.|||+|+...
T Consensus        90 l~~~~e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   90 LEEFQEVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHHHHhHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence            22     778888765421   2246778888999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHHHHHHHHH
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWIL  228 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~  228 (260)
                      ... ..+          ..+...++.+|+..  ..+.+.+||||.||++.|+++|..-+..++-+++.-
T Consensus       170 ~~~-~mt----------pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~  227 (369)
T KOG0665|consen  170 TDF-MMT----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWN  227 (369)
T ss_pred             ccc-ccC----------chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHH
Confidence            431 111          12233444444444  237889999999999999999987666444444433

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.6e-25  Score=163.00  Aligned_cols=198  Identities=39%  Similarity=0.572  Sum_probs=163.1

Q ss_pred             eeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhhhhHHH
Q psy7935          22 ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAIQTLIS   96 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~~~l~~   96 (260)
                      ..+++|+-+.+|.+.+.|.++++|...+|.+++|.++....+.+..+|+.++.+++-.++.     .++.....+  +|+
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I--~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLI--VME   79 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEE--EEE
Confidence            4678999999999988888899999999999999999999999999999999998765555     555555555  777


Q ss_pred             hhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccc
Q psy7935          97 NLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRN  176 (260)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~  176 (260)
                      |+.+..+...+... ...++..+-.-+.-||..||+|+||-++||++.++ .+.++|||++......++.++|++.+...
T Consensus        80 ~I~G~~lkd~l~~~-~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~-~i~~IDfGLg~~s~~~Ed~aVDl~Vlera  157 (204)
T COG3642          80 YIEGELLKDALEEA-RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG-RIYFIDFGLGEFSDEVEDKAVDLHVLERA  157 (204)
T ss_pred             EeCChhHHHHHHhc-chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-cEEEEECCcccccccHHhhhchHHHHHHH
Confidence            77775432122222 24477888888999999999999999999999964 59999999999999999999998877666


Q ss_pred             eeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHHHHHhccccccc
Q psy7935         177 LTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.                                 .|+   ...++++..++++|..... .+.++++++.+++.|+|+.
T Consensus       158 l~---------------------------------sth---~~~e~l~~~f~~gY~~~~~-~~~~Vl~~~~eIr~RgRYv  200 (204)
T COG3642         158 LE---------------------------------STH---EKAEELFAAFLEGYREEFG-EAKEVLERLEEIRLRGRYV  200 (204)
T ss_pred             HH---------------------------------hcc---ccHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhcccc
Confidence            55                                 454   4488999999999977644 4569999999999999999


Q ss_pred             ccCC
Q psy7935         257 CMVG  260 (260)
Q Consensus       257 ~~~~  260 (260)
                      ++.|
T Consensus       201 e~~~  204 (204)
T COG3642         201 ERRG  204 (204)
T ss_pred             cccC
Confidence            9865

>KOG1163|consensus

Probab=99.92  E-value=3.5e-24  Score=163.50  Aligned_cols=187  Identities=20%  Similarity=0.197  Sum_probs=139.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC----CCeE------
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM----ADIC------   82 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h----~~i~------   82 (260)
                      .+.|.++++||+|+||.+|.|..  +|.+||||+ ..+..++|.+.         -|..+++.+++    |+|.      
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~-Es~~a~hpqL~---------yEskvY~iL~~g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKL-ESSKAKHPQLL---------YESKVYRILQGGVGIPHIRHYGTEK   83 (341)
T ss_pred             ccceEEEEeecCCchhheeeeeeccCCceEEEEe-ecccCCCcchh---------HHHHHHHHhccCCCCchhhhhcccc
Confidence            34588899999999999999997  599999996 56666777653         34444444432    2222      


Q ss_pred             -----EeCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEee
Q psy7935          83 -----LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDF  154 (260)
Q Consensus        83 -----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DF  154 (260)
                           +.+.-++.+.+|+.+++.     .++.+.++.++.|++..++|+|.++++||||||+|+|+.-   ...+.++||
T Consensus        84 ~ynvlVMdLLGPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDF  158 (341)
T KOG1163|consen   84 DYNVLVMDLLGPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDF  158 (341)
T ss_pred             ccceeeeeccCccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEec
Confidence                 444555566888888865     4899999999999999999999999999999999999986   567999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcc-cc-ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG-TL-QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |+|+.+.+..+..--.|.-...+.   +++-+.+-. .. ...+...|+.|+|.++..+..|..|++
T Consensus       159 GLaKky~d~~t~~HIpyre~r~lt---GTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ  222 (341)
T KOG1163|consen  159 GLAKKYRDIRTRQHIPYREDRNLT---GTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ  222 (341)
T ss_pred             cchhhhccccccccCccccCCccc---eeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence            999988766544433344333332   222222211 11 457778999999999999999999987

>KOG0696|consensus

Probab=99.92  E-value=4e-26  Score=186.13  Aligned_cols=223  Identities=16%  Similarity=0.183  Sum_probs=158.9

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE------EeCCCc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC------LDDVQK   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~------~~~~~~   88 (260)
                      .|..+..||.|+||.|.++..+  .+.+|||++.+...-..+     .-+--..|-.+|.-...|..+      |..-..
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdD-----Dvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDD-----DVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecC-----cccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            3566889999999999999875  678999986544321111     112234555666655444433      222222


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                        ++.+|||++++.+      -..+-+..+..++..|+.||-|||++||++||||.+|||++.+|++||.|||+++..-.
T Consensus       425 --LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  425 --LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             --eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence              2446777766554      22477888889999999999999999999999999999999999999999999865322


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~  234 (260)
                      ..          ....++.++..+.+|+-.  .+|...+|.||+|++++|++.|.-|++   -+++++.+.+..   +..
T Consensus       503 ~~----------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKs  572 (683)
T KOG0696|consen  503 DG----------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKS  572 (683)
T ss_pred             CC----------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccc
Confidence            21          122345555555666544  678899999999999999999999988   677888887754   333


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      -+..+.++.+.+.-..+.+|..
T Consensus       573 lSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  573 LSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             ccHHHHHHHHHHhhcCCccccC
Confidence            3455566777777667777764

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.92  E-value=1.3e-25  Score=179.67  Aligned_cols=201  Identities=11%  Similarity=0.110  Sum_probs=135.5

Q ss_pred             CCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhh-------h
Q psy7935          27 GAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAI-------Q   92 (260)
Q Consensus        27 G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~-------~   92 (260)
                      |.+|.||++++  +++.+|+|.+....             .+.+|...+....|||++     +.+....++       +
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   70 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGG   70 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCC
Confidence            89999999998  48899999864321             122333444455699999     222222222       4


Q ss_pred             hHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccc
Q psy7935          93 TLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYV  172 (260)
Q Consensus        93 ~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~  172 (260)
                      +|.+++...   ..+++..+..++.|++.||+|||+++++||||||+||+++.++.++++|||.+..........     
T Consensus        71 ~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~-----  142 (237)
T cd05576          71 KLWSHISKF---LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGE-----  142 (237)
T ss_pred             CHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccC-----
Confidence            455554332   247889999999999999999999999999999999999999999999999875543321100     


Q ss_pred             cccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccHHH-HHH-HHHhhccccCCccHHHHHHHHHH
Q psy7935         173 LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDFRD-MFN-WILSSYRRQNRKQFETVMKTFAE  248 (260)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~il~~l~~  248 (260)
                          ..+    ..+.+|+..  ..+++++|+||+|++++++++|..|..... ... ......+...++.+.+++.+|..
T Consensus       143 ----~~~----~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  214 (237)
T cd05576         143 ----AVE----NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQ  214 (237)
T ss_pred             ----CcC----ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcccccccCCcccCCHHHHHHHHHHcc
Confidence                000    112233322  446788999999999999999965544111 111 00011233345667889999999


Q ss_pred             hccccccc
Q psy7935         249 VELRGRKR  256 (260)
Q Consensus       249 ~~~~~r~~  256 (260)
                      .++..|..
T Consensus       215 ~dp~~R~~  222 (237)
T cd05576         215 FNPTERLG  222 (237)
T ss_pred             CCHHHhcC
Confidence            99988875

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=1e-24  Score=206.31  Aligned_cols=205  Identities=18%  Similarity=0.245  Sum_probs=141.2

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchhhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQ   92 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~   92 (260)
                      +...+.||+|+||.||+|++  .+..||||.+....            .....|++.+++++||||+ +++.  .....+
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~  759 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN------------SIPSSEIADMGKLQHPNIVKLIGLCRSEKGAY  759 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc------------cccHHHHHHHhhCCCCCcceEEEEEEcCCCCE
Confidence            34467899999999999997  48899999753211            1123457889999999999 3332  122233


Q ss_pred             hHHHhhccCccc---ccchHHHHHHHHHHHHHHHHHhh---hCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          93 TLISNLDSQNIT---RENISDIIKLLSIEIGTTLSVMH---SNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        93 ~l~~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                      .++||+.+..+.   ..+++.....++.|++.|++|||   +.+|+||||||+||+++.++.+++. |+.+........ 
T Consensus       760 lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~-  837 (968)
T PLN00113        760 LIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTK-  837 (968)
T ss_pred             EEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCC-
Confidence            466666554431   12677888899999999999999   6699999999999999998888775 665433211100 


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------------------------
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------------------------  219 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------------------------  219 (260)
                               ...+.    .+.+|+..  ..++.++|+||||++++|+++|+.|++                         
T Consensus       838 ---------~~~t~----~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  904 (968)
T PLN00113        838 ---------CFISS----AYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW  904 (968)
T ss_pred             ---------ccccc----cccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe
Confidence                     01111    12233333  457889999999999999999987742                         


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                        ..+++.+|+...|.. ||++.++++.++++.
T Consensus       905 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~-RPt~~evl~~L~~~~  952 (968)
T PLN00113        905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTA-RPCANDVLKTLESAS  952 (968)
T ss_pred             eCccccCCCCccHHHHHHHHHHHHhhCcCCchh-CcCHHHHHHHHHHhh
Confidence                              113344667755554 678888888887664

>KOG0587|consensus

Probab=99.91  E-value=3.6e-24  Score=188.20  Aligned_cols=184  Identities=17%  Similarity=0.296  Sum_probs=138.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--   86 (260)
                      .+.+-+++.+.||.|.+|.||+++.  +++-.|+|+..+..-         ..+.++.|.++++.. .|||++ |++.  
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---------~deEiE~eynil~~~~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---------EEEEIELEYNMLKKYSHHPNVATFYGAFI   86 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---------ccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence            3445578899999999999999986  588899997543221         135677788888877 689998 4432  


Q ss_pred             -----CchhhhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          87 -----QKSAIQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        87 -----~~~~~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                           .+.-++.+||||.++..        +..+.+..+..|+..++.|+++||.+.++|||+|-.|||++.++.|||+|
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvD  166 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVD  166 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEee
Confidence                 12223445555555332        66799999999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeec-Ccccc-------ccccccceeEeecceeeeeccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL-------QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      ||++...+....+.           .+..+.|+| +|++.       ..++..+|+||+|++.+|+..|..
T Consensus       167 FGvSaQldsT~grR-----------nT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P  226 (953)
T KOG0587|consen  167 FGVSAQLDSTVGRR-----------NTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP  226 (953)
T ss_pred             eeeeeeeecccccc-----------cCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence            99998776654332           122334444 33333       457888999999999999988864

>KOG1027|consensus

Probab=99.91  E-value=9.2e-25  Score=191.05  Aligned_cols=186  Identities=20%  Similarity=0.260  Sum_probs=130.8

Q ss_pred             ccccCcceeeccCCce-eEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--C--
Q psy7935          15 DMVLQPAECFKQGAEG-RIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--Q--   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g-~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~--   87 (260)
                      +.++..-+.+|.|+.| .||+|...|++||||++....           .....+|+..++.- +||||+ ++..  .  
T Consensus       508 k~~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~-----------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q  576 (903)
T KOG1027|consen  508 KLFFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEF-----------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQ  576 (903)
T ss_pred             eeeeccHHHcccCCCCcEEEEEeeCCceehHHHHhhHh-----------HHHHHHHHHHHHhccCCCceEEEEeeccCCc
Confidence            3445666788999986 799999999999999854322           23567899988877 699999 3332  1  


Q ss_pred             ------chhhhhHHHhhccCccccc-chHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-----CCcEEEEeec
Q psy7935          88 ------KSAIQTLISNLDSQNITRE-NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----DHHLVMIDFG  155 (260)
Q Consensus        88 ------~~~~~~l~~~l~~~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-----~~~~kl~DFg  155 (260)
                            +.|..+|.++++....... ...-..+.++.|++.||++||+.+|+||||||.||||+.     ..+++|+|||
T Consensus       577 F~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg  656 (903)
T KOG1027|consen  577 FLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFG  656 (903)
T ss_pred             eEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccc
Confidence                  2222889999877311111 111334557899999999999999999999999999987     3689999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccc-ccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTE-DKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~-~~~~~  219 (260)
                      +++........      +.+  ..-+.|...| +|+.+  ...+..+||+|+||++++.++| ..|+.
T Consensus       657 lsKkl~~~~sS------~~r--~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFG  716 (903)
T KOG1027|consen  657 LSKKLAGGKSS------FSR--LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFG  716 (903)
T ss_pred             cccccCCCcch------hhc--ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCC
Confidence            99877554321      111  1122333444 33333  3355679999999999999987 55544

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.91  E-value=1.7e-23  Score=164.52  Aligned_cols=198  Identities=35%  Similarity=0.506  Sum_probs=142.9

Q ss_pred             eeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhhhhHHH
Q psy7935          22 ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAIQTLIS   96 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~~~l~~   96 (260)
                      +.||+|++|.||+|.+.|..+++|+...+..+.+..........+.+|+.++..+.|+++.     +.+.....  .+++
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~--lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI--IVME   79 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE--EEEE
Confidence            5789999999999999999999998766655555555555566788999999999988876     22333333  3666


Q ss_pred             hhccCcccccchH--HHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccc
Q psy7935          97 NLDSQNITRENIS--DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLK  174 (260)
Q Consensus        97 ~l~~~~~~~~~~~--~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~  174 (260)
                      |+.+..+...+..  .....++.+++.+|.++|+++++|+|++|+|||++ ++.++|+|||.+.......+...+++.  
T Consensus        80 ~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~~~~~~~~~~~~--  156 (211)
T PRK14879         80 YIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSKDLEDRAVDLHV--  156 (211)
T ss_pred             EeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCCcHHhhhccHHH--
Confidence            6665543211110  15567999999999999999999999999999999 789999999998753332222222110  


Q ss_pred             cceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         175 RNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                                                   +.    .......|....++++.++.+|.........++.+++.+++.|+|
T Consensus       157 -----------------------------~~----~~~~~~~~~~~~~~~~~f~~gY~~~~~~~~~~~~~~~~~i~~~~~  203 (211)
T PRK14879        157 -----------------------------LL----RSLESTHPDWAEELFEAFLEGYREVMGEKAEEVLERVKEIRLRGR  203 (211)
T ss_pred             -----------------------------HH----HHhhccCcchHHHHHHHHHHHHHHhhcccHHHHHHHHHHHHHhcC
Confidence                                         00    001111223357888999999987767888999999999999999


Q ss_pred             ccc
Q psy7935         255 KRC  257 (260)
Q Consensus       255 ~~~  257 (260)
                      ++.
T Consensus       204 ~~~  206 (211)
T PRK14879        204 YVE  206 (211)
T ss_pred             chh
Confidence            863

>KOG0695|consensus

Probab=99.90  E-value=1.5e-24  Score=172.99  Aligned_cols=228  Identities=15%  Similarity=0.213  Sum_probs=166.1

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~   85 (260)
                      ..+.|+++..||+|+|+.|..+++  +.+-+|+|++++.-++..+..+     ....|-.+..+- +||.++     |..
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedid-----wvqtek~vfe~asn~pflvglhscfqt  322 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDID-----WVQTEKHVFEQASNNPFLVGLHSCFQT  322 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccch-----hHHhhHHHHHhccCCCeEEehhhhhcc
Confidence            345689999999999999999998  4788999987666555444323     344555656554 688888     333


Q ss_pred             CCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ....+  .+.+|++++.+      ++.++++.+..+...|+.||.|||++||++||||.+|+|+|..|++||.|+|+++.
T Consensus       323 esrlf--fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke  400 (593)
T KOG0695|consen  323 ESRLF--FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  400 (593)
T ss_pred             cceEE--EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence            33333  35566655544      56799999999999999999999999999999999999999999999999999875


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-----------HHHHHHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-----------FRDMFNW  226 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-----------~~~~~~~  226 (260)
                      .-.+.+..          .++.+++-+.+|+-+  ..+...+|.|++|+.++||+.|+-|++           -..+++-
T Consensus       401 ~l~~gd~t----------stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv  470 (593)
T KOG0695|consen  401 GLGPGDTT----------STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV  470 (593)
T ss_pred             CCCCCccc----------ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH
Confidence            44333221          233333334444444  567889999999999999999998876           2345555


Q ss_pred             HHhhc---cccCCccHHHHHHHHHHhccccccccc
Q psy7935         227 ILSSY---RRQNRKQFETVMKTFAEVELRGRKRCM  258 (260)
Q Consensus       227 ~~~~~---~~~~~~~~~~il~~l~~~~~~~r~~~~  258 (260)
                      +++..   |..-+.....+++.+...++++|..+.
T Consensus       471 ilekqiriprslsvkas~vlkgflnkdp~erlgc~  505 (593)
T KOG0695|consen  471 ILEKQIRIPRSLSVKASHVLKGFLNKDPKERLGCR  505 (593)
T ss_pred             HhhhcccccceeehhhHHHHHHhhcCCcHHhcCCC
Confidence            55543   222234457889999999999987654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1.3e-23  Score=175.58  Aligned_cols=142  Identities=18%  Similarity=0.167  Sum_probs=106.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE---cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--EeCCCch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY---LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--LDDVQKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~   89 (260)
                      .+.|++.+.||+|+||.||+|.+   .+..+|||++.....   ..........+.+|++++++++|+|++  +++... 
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~---~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~-   92 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVP---WWSKPLARHLAAREIRALKTVRGIGVVPQLLATGK-   92 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccc---ccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCC-
Confidence            34588899999999999999987   366779997542211   000112356799999999999999988  544433 


Q ss_pred             hhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCC-CCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL-TTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl-kp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                       .+.+++|+.+..+.. ........++.+++.||.|||++||+|||| ||+|||++.++.+||+|||+++....
T Consensus        93 -~~LVmE~~~G~~L~~-~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188         93 -DGLVRGWTEGVPLHL-ARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             -cEEEEEccCCCCHHH-hCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence             344778887655421 111112458899999999999999999999 99999999999999999999987654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.90  E-value=2.5e-23  Score=180.94  Aligned_cols=203  Identities=16%  Similarity=0.098  Sum_probs=120.4

Q ss_pred             cccccCcceeeccCCceeEEEEEE------------------cCccEEEEEeecccCCCc-hhhH-----HHHHHHHHHH
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY------------------LGRSVLVKERFSKKYRHP-KLDE-----ALTKERITSE   69 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~------------------~~~~vavK~~~~~~~~~~-~~~~-----~~~~~~~~~e   69 (260)
                      ..+.|++.++||+|+||.||+|.+                  .++.||||.+........ ++..     ....+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            355689999999999999999964                  246799998643221000 0000     0011233456


Q ss_pred             HhhhcccCCCCeE------EeCC------------Cchhh-------hhHHHhhccC---------------cc------
Q psy7935          70 IRGLMKCRMADIC------LDDV------------QKSAI-------QTLISNLDSQ---------------NI------  103 (260)
Q Consensus        70 ~~~l~~~~h~~i~------~~~~------------~~~~~-------~~l~~~l~~~---------------~~------  103 (260)
                      +..+.+++|.+++      +.+.            ...++       ++|.+++...               ..      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            6677777766552      1110            00011       3444444321               10      


Q ss_pred             cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc------ccccccccce
Q psy7935         104 TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA------VDLYVLKRNL  177 (260)
Q Consensus       104 ~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~------~d~~~~~~~~  177 (260)
                      ....++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||++..........      +..|..++.+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence            1224567788899999999999999999999999999999999999999999986543321111      1123333322


Q ss_pred             eeeeeeee--ecC------cccc-ccccccceeEeecceeeeeccccc
Q psy7935         178 TTIIVVAY--CWS------KGTL-QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       178 ~~~~~~~~--~~~------~~~~-~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      ........  .+.      +... .....+.|+||+|+++++++++..
T Consensus       383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l  430 (507)
T PLN03224        383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL  430 (507)
T ss_pred             cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence            21000000  000      0000 012235799999999999998765

>KOG1345|consensus

Probab=99.90  E-value=9e-24  Score=163.78  Aligned_cols=183  Identities=18%  Similarity=0.164  Sum_probs=131.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE------EeCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC------LDDV   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~------~~~~   86 (260)
                      +.|++.+.+|+|.||.+-+++++  +..+++|-+. +..        .....|.+|...---+ .|.||+      |...
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp-~p~--------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~   94 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVP-RPQ--------TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS   94 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccC-cch--------hhHHHHHHHhccceeeccchhhhHHHHHHhhcC
Confidence            45888999999999999999995  7789999642 221        1346788988743334 588998      2222


Q ss_pred             C-------chhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEeeccc
Q psy7935          87 Q-------KSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLS  157 (260)
Q Consensus        87 ~-------~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DFg~~  157 (260)
                      .       ....|+|.+.+....    +.+....+++.|+++|+.|||+++++|||||.+||||-.  ..++||+|||++
T Consensus        95 d~YvF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t  170 (378)
T KOG1345|consen   95 DAYVFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLT  170 (378)
T ss_pred             ceEEEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccc
Confidence            2       112277777776654    778888889999999999999999999999999999975  569999999998


Q ss_pred             cccccccccc--ccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKA--VDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +..+..-.+.  ...|..++...+.        +.+.-...+..|+|.||++++..+||+.|++
T Consensus       171 ~k~g~tV~~~~~~~~y~~pe~~~~~--------~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  171 RKVGTTVKYLEYVNNYHAPELCDTV--------VNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             cccCceehhhhhhcccCCcHHHhhc--------cccceEecccccchheeeeeeeeecCCCcch
Confidence            7655432221  1112222221110        1122346788999999999999999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.90  E-value=2e-23  Score=185.11  Aligned_cols=198  Identities=37%  Similarity=0.561  Sum_probs=142.7

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE---EeCCCchhhhhH
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC---LDDVQKSAIQTL   94 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~---~~~~~~~~~~~l   94 (260)
                      +...+.||+|+||.||+|.+.+..+++|+...+..+...+.......++.+|++++..++|++++   .+.........+
T Consensus       335 ~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        335 KIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             cCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            45578999999999999999888888887665555544444444557789999999999999876   222222223358


Q ss_pred             HHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccc
Q psy7935          95 ISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLK  174 (260)
Q Consensus        95 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~  174 (260)
                      ++|+.+..+...+.  ....++.+++.+|.+||++|++||||||+|||+ .++.++|+|||+++......+...+.+...
T Consensus       415 ~E~~~g~~L~~~l~--~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~~~~d~a~~l~~~~  491 (535)
T PRK09605        415 MEYIGGKDLKDVLE--GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSDLIEDKAVDLHVLK  491 (535)
T ss_pred             EEecCCCcHHHHHH--HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccCCchHhhhhhHHHHH
Confidence            88887765322221  356689999999999999999999999999999 578999999999976543332222211100


Q ss_pred             cceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         175 RNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                      ..                                   +.+.. ....+.++.++++|...  ....++++++..++.|+|
T Consensus       492 ~~-----------------------------------~~~~~-~~~~~~~~~fl~gY~~~--~~~~~~~~~l~~~~~~~~  533 (535)
T PRK09605        492 QS-----------------------------------LESTH-YDFEELWEAFLEGYRET--EGAEDVLERLKEIEKRGR  533 (535)
T ss_pred             HH-----------------------------------hcCCC-CCHHHHHHHHHHhhccC--ccHHHHHHHHHHHHHccC
Confidence            00                                   11101 24577888999999765  677999999999999999


Q ss_pred             cc
Q psy7935         255 KR  256 (260)
Q Consensus       255 ~~  256 (260)
                      +.
T Consensus       534 ~~  535 (535)
T PRK09605        534 YL  535 (535)
T ss_pred             CC
Confidence            84

>KOG0608|consensus

Probab=99.90  E-value=2.1e-24  Score=184.12  Aligned_cols=199  Identities=13%  Similarity=0.140  Sum_probs=143.6

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--EeCC-Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--LDDV-QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~~-~~~~   90 (260)
                      ..|..++.||-|+||.|.+++-  +...+|.|.+.++.     ......-...+.|-.||..-.++=++  ++.+ ....
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaD-----Vl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKAD-----VLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDN  703 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHH-----HHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCc
Confidence            3467789999999999999984  67888988754332     22222234567788888888888888  3332 2334


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      +|.+|||+.++..      -..+.+..+..++.++..|+++.|..|+|||||||+|||||.+|++||.|||+++-+....
T Consensus       704 LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH  783 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH  783 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecc
Confidence            5568888877654      3458899999999999999999999999999999999999999999999999997553211


Q ss_pred             ---------ccc------ccccc----------------cccceee-eeeeeeecCcccc--ccccccceeEeecceeee
Q psy7935         165 ---------DKA------VDLYV----------------LKRNLTT-IIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIK  210 (260)
Q Consensus       165 ---------~~~------~d~~~----------------~~~~~~~-~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~  210 (260)
                               ...      .+.|.                .-+.+.. ++++.-+.+++++  ..+++..|.||.|++++|
T Consensus       784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e  863 (1034)
T KOG0608|consen  784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE  863 (1034)
T ss_pred             ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence                     000      01111                0011112 3334445566666  458888999999999999


Q ss_pred             ecccccccc
Q psy7935         211 VSTEDKAVD  219 (260)
Q Consensus       211 ~~~~~~~~~  219 (260)
                      |+.|+.|+.
T Consensus       864 m~~g~~pf~  872 (1034)
T KOG0608|consen  864 MLVGQPPFL  872 (1034)
T ss_pred             HhhCCCCcc
Confidence            999998865

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=3.3e-23  Score=187.97  Aligned_cols=142  Identities=19%  Similarity=0.246  Sum_probs=109.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|.+.+.||.|+||.||+|.+.  ++.||||++.......     ......+.+|+.++..++|+||+ ++..  ....
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN-----KNMVHQVQAERDALALSKSPFIVHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC-----HHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCE
Confidence            45788999999999999999985  8999999865433221     12245688899999999999999 3221  1122


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++.+++|+.+..+      ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence            2334444433322      22467888899999999999999999999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.89  E-value=4.3e-23  Score=160.74  Aligned_cols=196  Identities=34%  Similarity=0.517  Sum_probs=137.3

Q ss_pred             eeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE---EeCCCchhhhhHHHhhc
Q psy7935          23 CFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC---LDDVQKSAIQTLISNLD   99 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~---~~~~~~~~~~~l~~~l~   99 (260)
                      .||+|++|.||+|.+.|.++++|....+.++.+..+......++.+|++++..+.|+++.   .+.........+++|+.
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            379999999999999999999998766666655555555567788999999999887755   22222222234777777


Q ss_pred             cCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceee
Q psy7935         100 SQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTT  179 (260)
Q Consensus       100 ~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~  179 (260)
                      +..+...+..... .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++.......+...+.         
T Consensus        81 g~~l~~~~~~~~~-~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~~~~~~~~~~---------  149 (199)
T TIGR03724        81 GKPLKDVIEEGND-ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSDEIEDKAVDL---------  149 (199)
T ss_pred             CccHHHHHhhcHH-HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCCcHHhhhchH---------
Confidence            6553222222111 6899999999999999999999999999999 8999999999986643332222221         


Q ss_pred             eeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHHHHHhccccccc
Q psy7935         180 IIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                            +.+.-.    .....+....++...++.+|... .....++.+.+.++..|.|+.
T Consensus       150 ----------------------~~~~~~----~~~~~~~~~~~~~~~fl~~Y~~~-~~~~~~~~~~i~~~~~r~~~~  199 (199)
T TIGR03724       150 ----------------------HVLKRS----LESTHPDKAEELFEAFLEGYREE-FGEAKDVLERVKEIELRGRYV  199 (199)
T ss_pred             ----------------------HHHHHH----HhhhCchhHHHHHHHHHHHHHhh-cccHHHHHHHHHHHHhccCCC
Confidence                                  111100    11111223678888899999875 445566999999999999874

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0670|consensus

Probab=99.89  E-value=4e-23  Score=172.77  Aligned_cols=189  Identities=14%  Similarity=0.149  Sum_probs=136.2

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC------C
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA------D   80 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~------~   80 (260)
                      .|++....+|.+....|+|-||.|.+|.+.  |..||||++...     .+.    .+.=++|+++|++++..      |
T Consensus       425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-----E~M----~KtGl~EleiLkKL~~AD~Edk~H  495 (752)
T KOG0670|consen  425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-----EVM----HKTGLKELEILKKLNDADPEDKFH  495 (752)
T ss_pred             ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-----hHH----hhhhhHHHHHHHHhhccCchhhhH
Confidence            788888899999999999999999999994  889999986432     222    23345677888777511      1


Q ss_pred             eE-----EeCCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCc
Q psy7935          81 IC-----LDDVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHH  148 (260)
Q Consensus        81 i~-----~~~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~  148 (260)
                      ++     |..-++.|+      -.|.+.+......-.+..+.+..++.|+..||..|...||+|.||||+|||++. ...
T Consensus       496 clrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~i  575 (752)
T KOG0670|consen  496 CLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNI  575 (752)
T ss_pred             HHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcce
Confidence            11     222222222      334444443332345888899999999999999999999999999999999998 678


Q ss_pred             EEEEeeccccccccccccc---ccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         149 LVMIDFGLSQIKVSTEDKA---VDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +||||||.|......+-..   +..|.+++++.             -.+|+...|+||.||.+||+-||+.-+.
T Consensus       576 LKLCDfGSA~~~~eneitPYLVSRFYRaPEIiL-------------G~~yd~~iD~WSvgctLYElYtGkIlFp  636 (752)
T KOG0670|consen  576 LKLCDFGSASFASENEITPYLVSRFYRAPEIIL-------------GLPYDYPIDTWSVGCTLYELYTGKILFP  636 (752)
T ss_pred             eeeccCccccccccccccHHHHHHhccCcceee-------------cCcccCCccceeeceeeEEeeccceecC
Confidence            9999999997765543211   12233333332             1457888999999999999999976544

>KOG0200|consensus

Probab=99.89  E-value=6.8e-23  Score=183.56  Aligned_cols=222  Identities=16%  Similarity=0.206  Sum_probs=155.1

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMAD   80 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~   80 (260)
                      ++...+.+.+.+.+|+|.||.|++|...         ...||||.+.... ..      ...+.+..|++++..+ .|+|
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~-~~------~~~~~~~~El~~m~~~g~H~n  363 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA-SS------SEKKDLMSELNVLKELGKHPN  363 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc-Cc------HHHHHHHHHHHHHHHhcCCcc
Confidence            3444444566779999999999999853         3478899743221 11      2357899999999988 6999


Q ss_pred             eE-EeC---CCc-hhh-------hhHHHhhccCc---c--------c--ccchHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy7935          81 IC-LDD---VQK-SAI-------QTLISNLDSQN---I--------T--RENISDIIKLLSIEIGTTLSVMHSNNIIHGD  135 (260)
Q Consensus        81 i~-~~~---~~~-~~~-------~~l~~~l~~~~---~--------~--~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~d  135 (260)
                      ++ +.+   ... ..+       |+|.+|+....   .        .  ..++...++.++.||+.|++||++.+++|||
T Consensus       364 iv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRD  443 (609)
T KOG0200|consen  364 IVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRD  443 (609)
T ss_pred             hhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchh
Confidence            99 222   211 111       88999987765   0        1  2388999999999999999999999999999


Q ss_pred             CCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeec
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVS  212 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~  212 (260)
                      |-.+|||++.+..+||+|||+++...........     .   +....+. +++++.+  ..++.++|+||||+.+||+.
T Consensus       444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~-----~---~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eif  515 (609)
T KOG0200|consen  444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRTK-----S---SAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIF  515 (609)
T ss_pred             hhhhhEEecCCCEEEEccccceeccCCCCceEec-----C---CCCccceeecCHHHhccCcccccchhhHHHHHHHHHh
Confidence            9999999999999999999999865433221100     0   0001011 3455544  56899999999999999987


Q ss_pred             ccccc----------------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHH
Q psy7935         213 TEDKA----------------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAE  248 (260)
Q Consensus       213 ~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~  248 (260)
                      +-..+                            .+..+++..|+...+.. ||++.++.+.+..
T Consensus       516 sLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~-RP~F~~~~~~~~~  578 (609)
T KOG0200|consen  516 TLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPED-RPTFSECVEFFEK  578 (609)
T ss_pred             hCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCccc-CCCHHHHHHHHHH
Confidence            63321                            11335567777644444 6777777766665

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=7.5e-23  Score=157.62  Aligned_cols=139  Identities=14%  Similarity=0.204  Sum_probs=100.3

Q ss_pred             ceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchh------------------hHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          21 AECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKL------------------DEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~------------------~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      .+.||+|++|.||+|.+ +|++||||++..........                  ..........+|++.+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46899999999999998 59999999876542211110                  000112334569999999987665


Q ss_pred             E---EeCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHh-hhCCceecCCCCCcEEEccCCcEEE
Q psy7935          82 C---LDDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVM-HSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        82 ~---~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~L-H~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                      .   .......  ..+|||+.+..+      ...++...+..++.|++.+|.++ |+.||+||||||+|||++ ++.++|
T Consensus        82 ~~p~~~~~~~~--~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~L  158 (190)
T cd05147          82 PCPEPILLKSH--VLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYI  158 (190)
T ss_pred             CCCcEEEecCC--EEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEE
Confidence            4   2222222  347777765322      23577888999999999999999 699999999999999998 578999


Q ss_pred             Eeecccccccc
Q psy7935         152 IDFGLSQIKVS  162 (260)
Q Consensus       152 ~DFg~~~~~~~  162 (260)
                      +|||+|.....
T Consensus       159 iDFG~a~~~~~  169 (190)
T cd05147         159 IDVSQSVEHDH  169 (190)
T ss_pred             EEccccccCCC
Confidence            99999975533

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1165|consensus

Probab=99.88  E-value=9.2e-23  Score=162.31  Aligned_cols=185  Identities=15%  Similarity=0.183  Sum_probs=138.2

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE---E-------
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC---L-------   83 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~---~-------   83 (260)
                      -|.+.++||.|+||+++.|+.  ++++||||. .+.+..-|.         +..|...++.+. .++|.   +       
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKf-EPrkS~APQ---------LrdEYr~YKlL~g~~GIP~vYYFGqeG~~   98 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKF-EPRKSEAPQ---------LRDEYRTYKLLGGTEGIPQVYYFGQEGKY   98 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEe-ccccCCcch---------HHHHHHHHHHHcCCCCCCceeeeccccch
Confidence            488899999999999999995  799999996 444444444         344555455443 34444   2       


Q ss_pred             ----eCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-----CCcEEEEee
Q psy7935          84 ----DDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----DHHLVMIDF  154 (260)
Q Consensus        84 ----~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-----~~~~kl~DF  154 (260)
                          ++.-+..+.+|+|+|..     .++.+.+..+|.|++.-++++|++.+|+|||||+|+||..     ...+.++||
T Consensus        99 NiLVidLLGPSLEDLFD~CgR-----~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF  173 (449)
T KOG1165|consen   99 NILVIDLLGPSLEDLFDLCGR-----RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF  173 (449)
T ss_pred             hhhhhhhhCcCHHHHHHHhcC-----cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence                22233344888888844     5999999999999999999999999999999999999986     467999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcc-cc-ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG-TL-QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |+|+.+.++.++.--.|+--..+.   +++-+++-. .+ .+.+.+.|+.|+|=++++.+.|..|++
T Consensus       174 GmAK~YrDp~TkqHIPYrE~KSLs---GTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQ  237 (449)
T KOG1165|consen  174 GMAKEYRDPKTKQHIPYREHKSLS---GTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  237 (449)
T ss_pred             cchhhhcCccccccCccccccccc---cceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccc
Confidence            999999888766544454333222   333333322 22 557888999999999999999999977

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.88  E-value=1.6e-22  Score=159.72  Aligned_cols=184  Identities=20%  Similarity=0.244  Sum_probs=134.2

Q ss_pred             cCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cchh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKSA   90 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~~   90 (260)
                      |...+.||+|++|.||++...  ++++++|.+......       .....+.+|++.+++++|+|++ +.+.    ....
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~   73 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-------KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLY   73 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-------HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceE
Confidence            345789999999999999984  689999986543221       1246788999999999999998 2221    1111


Q ss_pred             h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          91 I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      +       ++|.+++....  ..+++..+..++.+++.++.+||+++++|+|++|+||+++.++.++|+|||.+......
T Consensus        74 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       74 LVMEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             EEEeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            1       36666665432  11788888999999999999999999999999999999999999999999998776543


Q ss_pred             ccccccccccccceeeeeeeeeec-Cccc---cccccccceeEeecceeeeeccccccccH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCW-SKGT---LQSYNHHLVMIDFGLSQIKVSTEDKAVDF  220 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~di~s~g~~~~~~~~~~~~~~~  220 (260)
                      .....         ... .+...| +++.   ....+.++|+|++|++++++.+|+.|++.
T Consensus       152 ~~~~~---------~~~-~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      152 LAALL---------KTV-KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ccccc---------cce-eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            20000         001 111222 2222   25566799999999999999999888753

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.88  E-value=2.5e-22  Score=160.18  Aligned_cols=206  Identities=22%  Similarity=0.283  Sum_probs=145.0

Q ss_pred             CceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh-------hh
Q psy7935          28 AEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI-------QT   93 (260)
Q Consensus        28 ~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~-------~~   93 (260)
                      +||.||+|.+.  |+.+++|++........       ...+.+|++.+++++|+|++ +.+    ....++       ++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~   73 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-------RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGD   73 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-------HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCC
Confidence            58999999984  68999998644322110       46788999999999999998 222    122122       36


Q ss_pred             HHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccccc
Q psy7935          94 LISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVL  173 (260)
Q Consensus        94 l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~  173 (260)
                      |.+++....   .++...++.++.+++.++.+||+.+++|+||+|+||+++.++.++|+|||.+..........      
T Consensus        74 L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~------  144 (244)
T smart00220       74 LFDLLKKRG---RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLT------  144 (244)
T ss_pred             HHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccc------
Confidence            666665432   27888899999999999999999999999999999999999999999999987665432110      


Q ss_pred             ccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhcccc------CCccHH
Q psy7935         174 KRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYRRQ------NRKQFE  240 (260)
Q Consensus       174 ~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------~~~~~~  240 (260)
                            ...+.+.| +|+..  ...++++|+|++|+++++++++..|+.    .....+.+.......      .+..+.
T Consensus       145 ------~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (244)
T smart00220      145 ------TFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAK  218 (244)
T ss_pred             ------cccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHH
Confidence                  00111122 22222  456789999999999999999987764    344444443333221      335567


Q ss_pred             HHHHHHHHhcccccc
Q psy7935         241 TVMKTFAEVELRGRK  255 (260)
Q Consensus       241 ~il~~l~~~~~~~r~  255 (260)
                      +++.+|...++..|.
T Consensus       219 ~~i~~~l~~~p~~Rp  233 (244)
T smart00220      219 DLIRKLLVKDPEKRL  233 (244)
T ss_pred             HHHHHHccCCchhcc
Confidence            888888877777775

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.88  E-value=4.6e-22  Score=154.99  Aligned_cols=196  Identities=22%  Similarity=0.307  Sum_probs=141.5

Q ss_pred             eccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCCc--hhh-------
Q psy7935          24 FKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQK--SAI-------   91 (260)
Q Consensus        24 lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~--~~~-------   91 (260)
                      ||+|++|.||++...  ++++++|++.......       ....+.+|+..++.+.|++++ +.+...  ...       
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-------LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-------HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecC
Confidence            689999999999996  8999999864432211       246789999999999999998 332211  112       


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                        .+|.+++....  ..++...+..++.+++.++++||+++++|+||+|.||+++. ++.++|+|||.+...........
T Consensus        74 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~  151 (215)
T cd00180          74 EGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLK  151 (215)
T ss_pred             CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhh
Confidence              34555544321  24788889999999999999999999999999999999999 89999999999876544321000


Q ss_pred             cccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHH
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKT  245 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~  245 (260)
                      .          ......+.+|+..   ...+.+.|+|++|++++++      ....+++..|+...+.. |+++.++++.
T Consensus       152 ~----------~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------~~~~~~l~~~l~~~p~~-R~~~~~l~~~  214 (215)
T cd00180         152 T----------IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------PELKDLIRKMLQKDPEK-RPSAKEILEH  214 (215)
T ss_pred             c----------ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------HHHHHHHHHHhhCCccc-CcCHHHHhhC
Confidence            0          0011111122221   2567889999999999998      55889999999866665 6777887653

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.88  E-value=9.2e-23  Score=159.29  Aligned_cols=176  Identities=15%  Similarity=0.189  Sum_probs=124.9

Q ss_pred             cccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHH-HHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEA-LTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      ..+.|.+.+.+|.|+||.||.+...+..+|+|++.++..+.+..... .....+.+|+..+.++.|++|.     +....
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~  108 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE  108 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence            35678999999999999999987778899999875544332221110 1123368999999999999998     12111


Q ss_pred             -c-----hhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 -K-----SAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 -~-----~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                       .     ...+.++||+++..+.......  .....+++.++..+|+.|++|||++|+||+++.++ ++|+|||.+... 
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~~~--~~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~-  184 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPEIS--EDVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT-  184 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhhcc--HHHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccc-
Confidence             1     1225588998886642221111  23567999999999999999999999999999888 999999988655 


Q ss_pred             ccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeec
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVS  212 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~  212 (260)
                       ..+.+.|.+.+.+.                  +..++|+||+|+.+....
T Consensus       185 -~e~~a~d~~vler~------------------y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        185 -AQRKAKDRIDLERH------------------YGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             -cchhhHHHHHHHhH------------------hcccccccceeEeehHHH
Confidence             34455555433332                  335899999999987653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.87  E-value=4.3e-22  Score=153.79  Aligned_cols=140  Identities=15%  Similarity=0.172  Sum_probs=102.4

Q ss_pred             ceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchh------------------hHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          21 AECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKL------------------DEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~------------------~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ...||+|++|.||+|++. |++||||++..........                  ........+..|.+.+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            578999999999999984 9999999876542110000                  001112345678999999988887


Q ss_pred             E---EeCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEE
Q psy7935          82 C---LDDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        82 ~---~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                      .   .+.....+  .++||+.+...      ...++......++.|++.++.++|+ +||+||||||+|||++ ++.++|
T Consensus        82 ~~p~~~~~~~~~--lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~l  158 (190)
T cd05145          82 PVPEPILLKKNV--LVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYI  158 (190)
T ss_pred             CCceEEEecCCE--EEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEE
Confidence            5   22222223  36777665421      2236677888899999999999999 9999999999999999 799999


Q ss_pred             Eeeccccccccc
Q psy7935         152 IDFGLSQIKVST  163 (260)
Q Consensus       152 ~DFg~~~~~~~~  163 (260)
                      +|||++.....+
T Consensus       159 iDFG~a~~~~~~  170 (190)
T cd05145         159 IDVSQAVELDHP  170 (190)
T ss_pred             EEcccceecCCC
Confidence            999999776543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0576|consensus

Probab=99.85  E-value=1.2e-22  Score=174.07  Aligned_cols=182  Identities=20%  Similarity=0.232  Sum_probs=141.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--   87 (260)
                      .+.+.|+.+..+|+|+||.||++++  +++..|+|+++...-.  +      -.....|+-+++..+|+||+ +++..  
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d------~~~iqqei~~~~dc~h~nivay~gsylr   83 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--D------FSGIQQEIGMLRDCRHPNIVAYFGSYLR   83 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--c------ccccccceeeeecCCCcChHHHHhhhhh
Confidence            5677899999999999999999998  4899999987654321  1      23467889999999999999 44432  


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...++..|||+.+..+      ...+++.++....+..++|++|||++|-+|||||-.|||++..|.+|+.|||.+..++
T Consensus        84 ~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit  163 (829)
T KOG0576|consen   84 RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT  163 (829)
T ss_pred             hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh
Confidence            2223668888887766      3458999999999999999999999999999999999999999999999999987665


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeec
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVS  212 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~  212 (260)
                      ..-.++.          .++++.++++++..     +.+.+..|+|++|+...|+-
T Consensus       164 ati~Krk----------sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~  209 (829)
T KOG0576|consen  164 ATIAKRK----------SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELG  209 (829)
T ss_pred             hhhhhhh----------cccCCccccchhHHHHHhcccccccccccccccchhhhh
Confidence            4432221          23344444444332     66899999999999888753

>KOG1167|consensus

Probab=99.82  E-value=7.3e-21  Score=155.53  Aligned_cols=194  Identities=15%  Similarity=0.207  Sum_probs=131.0

Q ss_pred             cccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV--   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~--   86 (260)
                      +.|..+++||.|+|+.||++++     ..+.||+|.+....          ...++.+|++.+..+. +.||+ ..+.  
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----------~p~ri~~El~~L~~~gG~~ni~~~~~~~r  105 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----------SPSRILNELEMLYRLGGSDNIIKLNGCFR  105 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----------CchHHHHHHHHHHHhccchhhhcchhhhc
Confidence            3377799999999999999986     36799999754322          1356889999998884 66776 2221  


Q ss_pred             CchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecccccccc
Q psy7935          87 QKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~  162 (260)
                      ++...-.+++|+.+...   -..++...+..++..++.||+++|.+||+|||+||.|+|.+. .+.-.|+|||++.....
T Consensus       106 nnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  106 NNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             cCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            11112224555544332   234677888899999999999999999999999999999987 67899999999973211


Q ss_pred             cc------c---------ccccccc-------ccccee-----------eeeeeeeec-Ccccc---ccccccceeEeec
Q psy7935         163 TE------D---------KAVDLYV-------LKRNLT-----------TIIVVAYCW-SKGTL---QSYNHHLVMIDFG  205 (260)
Q Consensus       163 ~~------~---------~~~d~~~-------~~~~~~-----------~~~~~~~~~-~~~~~---~~~~~~~di~s~g  205 (260)
                      ..      .         .+.+...       .+..+.           ....|++.+ +|+.+   ...++++|+||.|
T Consensus       186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G  265 (418)
T KOG1167|consen  186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG  265 (418)
T ss_pred             hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence            00      0         0000000       000011           123334443 33333   4578889999999


Q ss_pred             ceeeeecccccccc
Q psy7935         206 LSQIKVSTEDKAVD  219 (260)
Q Consensus       206 ~~~~~~~~~~~~~~  219 (260)
                      ++++.+++++.|+-
T Consensus       266 VI~Lslls~~~PFf  279 (418)
T KOG1167|consen  266 VILLSLLSRRYPFF  279 (418)
T ss_pred             ceeehhhccccccc
Confidence            99999999988743

>KOG1290|consensus

Probab=99.82  E-value=3.7e-20  Score=153.93  Aligned_cols=128  Identities=21%  Similarity=0.176  Sum_probs=95.1

Q ss_pred             eeccccc-cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-----CC-
Q psy7935           9 KITEASD-MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-----MA-   79 (260)
Q Consensus         9 ~i~~~~~-~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-----h~-   79 (260)
                      .|....+ .+|-+..+||-|-|++||+|.++  .+-||+|+...         .+...+..+.||.+|++++     |+ 
T Consensus        70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---------AqhYtEaAlDEIklL~~v~~~Dp~~~~  140 (590)
T KOG1290|consen   70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---------AQHYTEAALDEIKLLQQVREGDPNDPG  140 (590)
T ss_pred             eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---------hhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            3444445 78889999999999999999995  78999998432         1223577889999999885     22 


Q ss_pred             --CeE-EeCC------CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEE
Q psy7935          80 --DIC-LDDV------QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMI  142 (260)
Q Consensus        80 --~i~-~~~~------~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nil  142 (260)
                        +|+ +++.      ++..+..++|+|-.+.+       -+-++...+..|+.|++.||.|||.. ||+|-||||+|||
T Consensus       141 ~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvL  220 (590)
T KOG1290|consen  141 KKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVL  220 (590)
T ss_pred             CceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceee
Confidence              344 3332      33333445555443322       34589999999999999999999975 9999999999999


Q ss_pred             Ecc
Q psy7935         143 LSS  145 (260)
Q Consensus       143 l~~  145 (260)
                      +..
T Consensus       221 l~~  223 (590)
T KOG1290|consen  221 LCS  223 (590)
T ss_pred             eec
Confidence            986

>smart00090 RIO RIO-like kinase

Probab=99.81  E-value=7.3e-20  Score=145.63  Aligned_cols=143  Identities=17%  Similarity=0.217  Sum_probs=102.3

Q ss_pred             ccCcceeeccCCceeEEEEE-E--cCccEEEEEeecccCCCch----------------hhHHHHHHHHHHHHhhhcccC
Q psy7935          17 VLQPAECFKQGAEGRIFKTE-Y--LGRSVLVKERFSKKYRHPK----------------LDEALTKERITSEIRGLMKCR   77 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~-~--~~~~vavK~~~~~~~~~~~----------------~~~~~~~~~~~~e~~~l~~~~   77 (260)
                      .|++.+.||+|++|.||+|. +  +|++||+|++.........                .........+.+|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47788999999999999998 3  5899999987654321000                001112345678999999997


Q ss_pred             CCCeE---EeCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCC-ceecCCCCCcEEEccCC
Q psy7935          78 MADIC---LDDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNN-IIHGDLTTSNMILSSDH  147 (260)
Q Consensus        78 h~~i~---~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~-i~H~dlkp~Nill~~~~  147 (260)
                      +.++.   .+.....  +.+++|+.+..+      ........+..++.|++.++++||++| ++||||||+||+++ ++
T Consensus       109 ~~~i~~p~~~~~~~~--~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~  185 (237)
T smart00090      109 EAGVPVPKPIAWRRN--VLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DG  185 (237)
T ss_pred             hcCCCCCeeeEecCc--eEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CC
Confidence            64432   2322222  346666666332      122445556789999999999999999 99999999999999 88


Q ss_pred             cEEEEeecccccccc
Q psy7935         148 HLVMIDFGLSQIKVS  162 (260)
Q Consensus       148 ~~kl~DFg~~~~~~~  162 (260)
                      .++|+|||.+.....
T Consensus       186 ~i~LiDFg~a~~~~~  200 (237)
T smart00090      186 KVVIIDVSQSVELDH  200 (237)
T ss_pred             CEEEEEChhhhccCC
Confidence            999999999875433

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.81  E-value=1.3e-19  Score=138.93  Aligned_cols=136  Identities=16%  Similarity=0.056  Sum_probs=99.1

Q ss_pred             CcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-CCeE-EeCCCchhhhhHHH
Q psy7935          19 QPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-ADIC-LDDVQKSAIQTLIS   96 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~-~~~~~~~~~~~l~~   96 (260)
                      .+...|++|+||+||.+...+.+++.+.+....    -.........+.+|+++++++.| ++++ +++....  +.+++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~----~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~--~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAP----WWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGR--HLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccch----hhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCE--EEEEe
Confidence            356889999999999888778888876532211    11122223468899999999964 5566 4444333  34777


Q ss_pred             hhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCC-CCCcEEEccCCcEEEEeeccccccc
Q psy7935          97 NLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL-TTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl-kp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      |+.+..+....... ...++.|++.+|+++|++||+|||| ||+|||++.++.++|+|||++....
T Consensus        79 yI~G~~L~~~~~~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         79 YLAGAAMYQRPPRG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             eecCccHHhhhhhh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            77776543322222 2357889999999999999999999 7999999999999999999997544

>KOG1024|consensus

Probab=99.81  E-value=1.7e-20  Score=152.41  Aligned_cols=219  Identities=16%  Similarity=0.207  Sum_probs=148.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE------
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC------   82 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~------   82 (260)
                      .+++....+-+|.||+||.|.+.       .++|.+|.+..+       .++..-..++.|.-.+....|||+.      
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-------AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-------ASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-------ccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            34666778889999999999652       456777764322       1222235688888888888999998      


Q ss_pred             EeCCCchh-------hhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          83 LDDVQKSA-------IQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        83 ~~~~~~~~-------~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                      ..+.....       .+.|..|+.....     .+.++.-++..++.|++.|++|||++||+|.||-.+|.+|+...++|
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk  436 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK  436 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence            22222222       2888888873222     44577888888999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccc------------
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDK------------  216 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~------------  216 (260)
                      |+|=.+++...+..     ...+|-.-+   -.--|++.+.+  ..++..+|+||||+.+||++|-.+            
T Consensus       437 ltDsaLSRDLFP~D-----YhcLGDnEn---RPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~  508 (563)
T KOG1024|consen  437 LTDSALSRDLFPGD-----YHCLGDNEN---RPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME  508 (563)
T ss_pred             eccchhccccCccc-----ccccCCCCC---CcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence            99999887654321     111111100   00012344444  568999999999999999987443            


Q ss_pred             ---------------cccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         217 ---------------AVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       217 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                     |.+...++.-||.-.+. +||++.++...|.+..
T Consensus       509 ~ylkdGyRlaQP~NCPDeLf~vMacCWallpe-eRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  509 HYLKDGYRLAQPFNCPDELFTVMACCWALLPE-ERPSFSQLVICLSEFH  556 (563)
T ss_pred             HHHhccceecCCCCCcHHHHHHHHHHHhcCcc-cCCCHHHHHHHHHHHH
Confidence                           22233445555553333 3666677666666543

>KOG1240|consensus

Probab=99.80  E-value=2.6e-20  Score=167.73  Aligned_cols=200  Identities=15%  Similarity=0.142  Sum_probs=138.2

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--CCchhh---
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--VQKSAI---   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--~~~~~~---   91 (260)
                      +...+.||++.|=.|.+|++....|+||++..+....+ +  .. -++.+.|+. ...+++||.+ |.-  ......   
T Consensus        25 ~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~s-L--~~-~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylv   99 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTIS-L--RP-FKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLV   99 (1431)
T ss_pred             eeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCC-c--hH-HHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHH
Confidence            55578999999999999999766799999765543222 1  11 233444555 6677899988 211  111112   


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ..|+|.+..+.   .+..-+.+.|+.|++.||..+|..||.|||||.+||||++.+++.|.||..-+..--++++
T Consensus       100 RqyvkhnLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN  176 (1431)
T KOG1240|consen  100 RQYVKHNLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN  176 (1431)
T ss_pred             HHHHhhhhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence                 45555555443   4666666669999999999999999999999999999999999999999987766656665


Q ss_pred             cccc-cccccceeeeeeeeeecCcc--------cccc-ccccceeEeecceeeeeccc-cccccHHHHHH
Q psy7935         167 AVDL-YVLKRNLTTIIVVAYCWSKG--------TLQS-YNHHLVMIDFGLSQIKVSTE-DKAVDFRDMFN  225 (260)
Q Consensus       167 ~~d~-~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~  225 (260)
                      ..|. |.+-..-...++.+|+..-.        .... .+++.||+|.||++.|+.+. +-+++..+++.
T Consensus       177 Padf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a  246 (1431)
T KOG1240|consen  177 PADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA  246 (1431)
T ss_pred             cccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh
Confidence            5553 22333333455555543221        1123 78899999999999999765 55566655543

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.79  E-value=3e-19  Score=138.95  Aligned_cols=144  Identities=17%  Similarity=0.162  Sum_probs=103.7

Q ss_pred             ccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhh--------------HHHHHHHHHHHHhhhcccCCCCe
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLD--------------EALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~--------------~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      .+.+.+.||+|+||.||++.. +|+.||||++...........              .......+..|+..+..+.++++
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            466789999999999999988 589999998654321100000              00112346788888988877754


Q ss_pred             E---EeCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          82 C---LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        82 ~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      .   .++....  +.+++|+.+..+...........++.+++.++.++|++|++||||+|+||+++.++.++|+|||++.
T Consensus        96 ~v~~~~~~~~~--~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~  173 (198)
T cd05144          96 PVPKPIDWNRH--AVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMV  173 (198)
T ss_pred             CCCceeecCCc--eEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccc
Confidence            3   3333333  3477887776543322224456688999999999999999999999999999999999999999996


Q ss_pred             cccc
Q psy7935         159 IKVS  162 (260)
Q Consensus       159 ~~~~  162 (260)
                      ....
T Consensus       174 ~~~~  177 (198)
T cd05144         174 STDH  177 (198)
T ss_pred             cCCC
Confidence            5544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1164|consensus

Probab=99.79  E-value=1.1e-18  Score=145.60  Aligned_cols=193  Identities=13%  Similarity=0.089  Sum_probs=125.1

Q ss_pred             ccCcceeeccCCceeEEEEEEcC---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC----CCeE---EeC-
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYLG---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM----ADIC---LDD-   85 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h----~~i~---~~~-   85 (260)
                      .+.+.+.||+|+||.||.|.+..   ..+|+|..........        ..+..|..++..+..    +++.   ..+ 
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--------~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~   90 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--------SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR   90 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--------ccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence            68889999999999999999853   4688887443221111        135556666666652    2333   222 


Q ss_pred             CCch--hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-----CcEEEE
Q psy7935          86 VQKS--AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-----HHLVMI  152 (260)
Q Consensus        86 ~~~~--~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-----~~~kl~  152 (260)
                      ....  ++      .+|.+...... .+.++...+.+++.|++.+|++||+.|++||||||+|+++...     ..+.|.
T Consensus        91 ~~~~~~~iVM~l~G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~ll  169 (322)
T KOG1164|consen   91 STEDFNFIVMSLLGPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLL  169 (322)
T ss_pred             CCCceeEEEEeccCccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEE
Confidence            1111  11      44444443333 4679999999999999999999999999999999999999874     479999


Q ss_pred             eecccccccccccccccccccccc--eeeeeeeeeec-CccccccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRN--LTTIIVVAYCW-SKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||+++.+....+.... ...++.  ....++..+.- ........+.+.|+||+..++.++..+..|+.
T Consensus       170 DfGlar~~~~~~~~~~~-~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~  238 (322)
T KOG1164|consen  170 DFGLARRFKYVGDSGGN-LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE  238 (322)
T ss_pred             ecCCCccccccCCCCcc-cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence            99999843321111100 000001  00011111111 11222568889999999999999999988875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.79  E-value=1.3e-19  Score=167.99  Aligned_cols=126  Identities=16%  Similarity=0.089  Sum_probs=82.8

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc---c
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA---V  168 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~---~  168 (260)
                      ++|.+++...  ...+++..+..++.||+.||.|||++||+||||||+|||++..+.+|++|||++.......+..   .
T Consensus        64 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~  141 (793)
T PLN00181         64 VSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSR  141 (793)
T ss_pred             ccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccc
Confidence            4677777543  2458999999999999999999999999999999999999766666666665553322111000   0


Q ss_pred             ccc--------------------c--cccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         169 DLY--------------------V--LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       169 d~~--------------------~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |.-                    .  .+.......++.++.+|+..  ..++.++|||||||+++|++++..|..
T Consensus       142 DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~  216 (793)
T PLN00181        142 EIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE  216 (793)
T ss_pred             ccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchh
Confidence            000                    0  00000011222334455544  457899999999999999998765544

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.78  E-value=2.5e-19  Score=136.62  Aligned_cols=140  Identities=16%  Similarity=0.249  Sum_probs=99.1

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccc
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLY  171 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~  171 (260)
                      |+|.+++...  ...+++..++.++.|++.||+|||+++      ||+|||++.++.+|+  ||++..........    
T Consensus         1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g----   66 (176)
T smart00750        1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRV----   66 (176)
T ss_pred             CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccCCC----
Confidence            4678888653  235899999999999999999999998      999999999999999  99987654432211    


Q ss_pred             ccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhccccCC---------
Q psy7935         172 VLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYRRQNR---------  236 (260)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---------  236 (260)
                                 +..+.+|+..  ..+++++||||+|++++++++|..|+.    ....+............         
T Consensus        67 -----------~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (176)
T smart00750       67 -----------DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESV  135 (176)
T ss_pred             -----------cccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHH
Confidence                       1222333333  457789999999999999999998865    12233333322221100         


Q ss_pred             ---ccHHHHHHHHHHhccccccc
Q psy7935         237 ---KQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       237 ---~~~~~il~~l~~~~~~~r~~  256 (260)
                         ..+.+++.+|...++..|..
T Consensus       136 ~~~~~~~~~i~~cl~~~p~~Rp~  158 (176)
T smart00750      136 SAARSFADFMRVCASRLPQRREA  158 (176)
T ss_pred             HhhhhHHHHHHHHHhcccccccC
Confidence               14677888888777777754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590|consensus

Probab=99.77  E-value=1.6e-18  Score=154.06  Aligned_cols=190  Identities=18%  Similarity=0.166  Sum_probs=131.7

Q ss_pred             CcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC----
Q psy7935          19 QPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ----   87 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~----   87 (260)
                      .....+|.|++|.|+.+...  .+..+.|....+ .. +..........+..|+.+-.++.|+|++     +++..    
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~  398 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQ  398 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchh
Confidence            45788999999988877753  333444432211 11 2222222233378899999999999987     11111    


Q ss_pred             --chhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccc
Q psy7935          88 --KSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED  165 (260)
Q Consensus        88 --~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~  165 (260)
                        +.+-++|+.++...   ..++...+..++.|++.|++|||++||.|||+||+|+++..+|.+||+|||.+.....+.+
T Consensus       399 ~mE~~~~Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  399 SMEYCPYDLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhhcccHHHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence              11113344444332   2578888889999999999999999999999999999999999999999999987766554


Q ss_pred             ccccccccccceeeeeeeeeecCcccc--ccccc-cceeEeecceeeeecccccccc
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNH-HLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....      ....+.+-.|+.+|+..  ..+.+ -.|+||.|+++..|.+++.|+.
T Consensus       476 ~~~~------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  476 KNIH------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK  526 (601)
T ss_pred             hhhh------hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence            3211      22345555666666655  44444 4999999999999999998887

>PRK10345 hypothetical protein; Provisional

Probab=99.76  E-value=6.6e-18  Score=131.46  Aligned_cols=124  Identities=12%  Similarity=0.049  Sum_probs=86.1

Q ss_pred             CcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-----CCCCeE-EeC---CCc-
Q psy7935          19 QPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-----RMADIC-LDD---VQK-   88 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~h~~i~-~~~---~~~-   88 (260)
                      ...+.||+|+||.||.-...+. .+||+.......        ....+.+|+.+++.+     .||||+ +++   ... 
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~~~~-k~IKv~~~~~~~--------~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g   75 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPEDAQ-RCIKIVYHRGDG--------GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG   75 (210)
T ss_pred             CCcceecCCCceEEEECCCCcC-eEEEEEeccccc--------hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence            3468999999999996222333 468876443211        235689999999999     579998 332   111 


Q ss_pred             -hh------------hhhHHHhhccCcccccchHHHHHHHHHHHHHHH-HHhhhCCceecCCCCCcEEEcc----CCcEE
Q psy7935          89 -SA------------IQTLISNLDSQNITRENISDIIKLLSIEIGTTL-SVMHSNNIIHGDLTTSNMILSS----DHHLV  150 (260)
Q Consensus        89 -~~------------~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~i~H~dlkp~Nill~~----~~~~k  150 (260)
                       ..            -++|.+++....    +++.  ..++.+++.++ +|||+++|+||||||+|||++.    ++.++
T Consensus        76 ~g~v~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~  149 (210)
T PRK10345         76 TGYVYDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPV  149 (210)
T ss_pred             CeEEEEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEE
Confidence             11            146667765432    4444  24678888888 9999999999999999999974    34899


Q ss_pred             EEeeccc
Q psy7935         151 MIDFGLS  157 (260)
Q Consensus       151 l~DFg~~  157 (260)
                      |+||+-+
T Consensus       150 LiDg~G~  156 (210)
T PRK10345        150 VCDNIGE  156 (210)
T ss_pred             EEECCCC
Confidence            9994444

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.75  E-value=3.8e-18  Score=131.46  Aligned_cols=139  Identities=17%  Similarity=0.175  Sum_probs=91.4

Q ss_pred             ceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhH----------------HHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          21 AECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDE----------------ALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~----------------~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      .+.||+|+||.||+|.+. |++||||++............                .........|...+.++.+.++. 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            568999999999999986 999999986543221111100                00011123455556555444322 


Q ss_pred             --EeCCCchhhhhHHHhhccC-----cccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEee
Q psy7935          83 --LDDVQKSAIQTLISNLDSQ-----NITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        83 --~~~~~~~~~~~l~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                        .+.....  ..+++|+.+.     .+........+..++.+++.++.++|. ++|+|+||||+||+++ ++.++|+||
T Consensus        82 ~~~~~~~~~--~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDf  158 (187)
T cd05119          82 PKPIDLNRH--VLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDV  158 (187)
T ss_pred             CceEecCCC--EEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEEC
Confidence              2222222  2366666552     111111115677799999999999999 9999999999999999 899999999


Q ss_pred             cccccccc
Q psy7935         155 GLSQIKVS  162 (260)
Q Consensus       155 g~~~~~~~  162 (260)
                      |.+.....
T Consensus       159 g~a~~~~~  166 (187)
T cd05119         159 PQAVEIDH  166 (187)
T ss_pred             cccccccC
Confidence            99965544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166|consensus

Probab=99.73  E-value=3e-18  Score=156.11  Aligned_cols=174  Identities=16%  Similarity=0.218  Sum_probs=116.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC---CCCeE----EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR---MADIC----LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~----~~~~   86 (260)
                      +..|.+-+.+|+|+||.||+|.. +|+.||+|+-.+...           ..|+-..++..+++   -+.|.    .+-.
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~-----------WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP-----------WEFYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc-----------eeeeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            44578889999999999999997 599999997433221           11222223333333   01111    1111


Q ss_pred             Cchh--------hhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-------CCcEEE
Q psy7935          87 QKSA--------IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-------DHHLVM  151 (260)
Q Consensus        87 ~~~~--------~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-------~~~~kl  151 (260)
                      ...+        .|+|.++++.   .+.+++...+.+..|++..+++||.++|||+||||+|+||..       .-.++|
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence            1111        1889999985   458999999999999999999999999999999999999975       346999


Q ss_pred             Eeecccccccccccc-------cccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccc
Q psy7935         152 IDFGLSQIKVSTEDK-------AVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~-------~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      +|||.+..+..-.+.       .+|.+.             ++.-..-.+++..+|.|.+..+.+.|+.|.
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~-------------C~EM~~grpWtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFD-------------CIEMREGRPWTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccch-------------hHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence            999998655332211       112111             111111145677788888887777777663

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.72  E-value=4.1e-17  Score=135.37  Aligned_cols=192  Identities=18%  Similarity=0.171  Sum_probs=132.1

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC-CeE-E---eCCCch-hh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA-DIC-L---DDVQKS-AI   91 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~i~-~---~~~~~~-~~   91 (260)
                      |.+.+.||.|+|+.||++.+. ..+++|.+........     .....+.+|+..+..+.|+ +++ +   ...... .+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   75 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS-----KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYL   75 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccch-----hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEE
Confidence            456788999999999999988 7788998654433221     1246788999999999988 577 2   211111 11


Q ss_pred             -------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeeccccccccc
Q psy7935          92 -------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 -------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~~~~~  163 (260)
                             +.+.+++........+.......++.|++.++.|+|+++++|||+||+||+++..+ .++++|||.+......
T Consensus        76 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~  155 (384)
T COG0515          76 VMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP  155 (384)
T ss_pred             EEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence                   33333333221002578888999999999999999999999999999999999988 7999999998754433


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......    .......+...+.+|+..     .......|+||+|+++++++++..|+.
T Consensus       156 ~~~~~~~----~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~  212 (384)
T COG0515         156 GSTSSIP----ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFE  212 (384)
T ss_pred             Ccccccc----ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            2211100    011122222233333333     367888999999999999999887755

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.71  E-value=4.5e-18  Score=136.89  Aligned_cols=226  Identities=13%  Similarity=0.136  Sum_probs=123.0

Q ss_pred             cCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC----------CCeE---
Q psy7935          18 LQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM----------ADIC---   82 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h----------~~i~---   82 (260)
                      +.....||.|+++.||.+++  +|+++++|+..... . +   ....-+.+.+|.-....+.+          -.++   
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~-~---~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~   88 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-D-A---SANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL   88 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-T-T---HTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEeccc-c-c---chHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee
Confidence            45578999999999999999  48999999976544 1 1   11123455555543333221          1111   


Q ss_pred             ----------EeCCC----ch--------------hhhhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCcee
Q psy7935          83 ----------LDDVQ----KS--------------AIQTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIH  133 (260)
Q Consensus        83 ----------~~~~~----~~--------------~~~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H  133 (260)
                                +....    .+              .+..+.+.|..... ...+.......+..|++..+++||++|++|
T Consensus        89 d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVH  168 (288)
T PF14531_consen   89 DLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVH  168 (288)
T ss_dssp             EEEEETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred             EEEEEcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEe
Confidence                      11111    01              01333333433221 122344444557799999999999999999


Q ss_pred             cCCCCCcEEEccCCcEEEEeeccccccccccc-ccccc-cccccceeeeeeeeeecCccccccccccceeEeecceeeee
Q psy7935         134 GDLTTSNMILSSDHHLVMIDFGLSQIKVSTED-KAVDL-YVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKV  211 (260)
Q Consensus       134 ~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~-~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~  211 (260)
                      +||+|+|++++.+|.++|+||+.....+.... ...+. +..++.......    +. +....++.+.|.|++|++++.+
T Consensus       169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~----~~-~~~~~~t~~~DaW~LG~~ly~l  243 (288)
T PF14531_consen  169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQ----FG-QNNAPYTFATDAWQLGITLYSL  243 (288)
T ss_dssp             ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTS----CH-HSEEEE-HHHHHHHHHHHHHHH
T ss_pred             cccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcc----cC-cccceeeeccCHHHHHHHHHHH
Confidence            99999999999999999999987655433221 11111 111111000000    00 0223578889999999999999


Q ss_pred             ccccccccHH--HHHH-HHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         212 STEDKAVDFR--DMFN-WILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       212 ~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                      .++..|+...  .... .-.+... .-+..+.+++..|.+.+++.|
T Consensus       244 WC~~lPf~~~~~~~~~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  244 WCGRLPFGLSSPEADPEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHSS-STCCCGGGSTSGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             HHccCCCCCCCccccccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9999988721  1111 1122222 334455666666666655544

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.69  E-value=1.7e-17  Score=132.34  Aligned_cols=138  Identities=18%  Similarity=0.280  Sum_probs=94.1

Q ss_pred             ceeec-cCCceeEEEEEEcCccEEEEEeecccC-----CCchhhHHHHHHHHHHHHhhhcccCCCCeE------EeCCCc
Q psy7935          21 AECFK-QGAEGRIFKTEYLGRSVLVKERFSKKY-----RHPKLDEALTKERITSEIRGLMKCRMADIC------LDDVQK   88 (260)
Q Consensus        21 ~~~lg-~G~~g~V~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~------~~~~~~   88 (260)
                      ...|| .|+.|.||.+...+..++||.+.....     +............+.+|++++.++.|+++.      +.....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~  115 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH  115 (239)
T ss_pred             CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence            45687 899999999999999999998643211     100001122346788999999999988863      111111


Q ss_pred             hhh---hhHHHhhcc-Ccc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          89 SAI---QTLISNLDS-QNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~---~~l~~~l~~-~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...   ..+++++.+ ..+     ...+++.    .+.+++.+|.+||++||+||||||+|||++.++.++|+|||.+..
T Consensus       116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        116 GLFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             CcceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            111   134444443 111     1112333    357899999999999999999999999999888999999999877


Q ss_pred             ccc
Q psy7935         160 KVS  162 (260)
Q Consensus       160 ~~~  162 (260)
                      ..+
T Consensus       192 ~~~  194 (239)
T PRK01723        192 RTP  194 (239)
T ss_pred             CCC
Confidence            653

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.62  E-value=2.4e-15  Score=111.26  Aligned_cols=132  Identities=14%  Similarity=0.163  Sum_probs=99.0

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC--CeE-Ee--CCCchhhhhH
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA--DIC-LD--DVQKSAIQTL   94 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~--~i~-~~--~~~~~~~~~l   94 (260)
                      +++.+|+|.++.||++...++.+++|.......          ...+.+|+..++.+.+.  +++ ++  .......+.+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v   71 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK----------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLL   71 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCc----------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEE
Confidence            357899999999999999888999997432211          24577888888888653  444 22  1222344668


Q ss_pred             HHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC---CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          95 ISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN---NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        95 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++|+.+..+... +......++.+++.+++.||..   +++|+|++|+|||++.++.++++|||.+.....
T Consensus        72 ~e~~~g~~~~~~-~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~  141 (155)
T cd05120          72 MEWIEGETLDEV-SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP  141 (155)
T ss_pred             EEecCCeecccC-CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence            888877653222 4566667889999999999985   799999999999999989999999999875443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0606|consensus

Probab=99.58  E-value=1.9e-15  Score=136.55  Aligned_cols=207  Identities=14%  Similarity=0.165  Sum_probs=136.5

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeEEeCCCc
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQK   88 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~   88 (260)
                      .......|+.++.+..|+||.||.++++  .+++|+|+ ..++     +        +.+-  ++....+|.++      
T Consensus        78 ~~p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-----l--------ilRn--ilt~a~npfvv------  135 (1205)
T KOG0606|consen   78 RAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-----L--------ILRN--ILTFAGNPFVV------  135 (1205)
T ss_pred             cCCCccccceeEeeccCCCCceeeeeccccccchhhcc-cccc-----h--------hhhc--cccccCCccee------
Confidence            3455677999999999999999999885  78899864 2211     1        1111  33333344333      


Q ss_pred             hhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          89 SAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                         ++....+....   .++        .+++.+++|||+.||+|||+||+|.+|+.-|++|+.|||+++.-.....  +
T Consensus       136 ---gDc~tllk~~g---~lP--------vdmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a--t  199 (1205)
T KOG0606|consen  136 ---GDCATLLKNIG---PLP--------VDMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA--T  199 (1205)
T ss_pred             ---chhhhhcccCC---CCc--------chhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhcc--c
Confidence               33333333221   122        2237889999999999999999999999999999999999865322211  1


Q ss_pred             cccc-----ccccee-eeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcccc--
Q psy7935         169 DLYV-----LKRNLT-TIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQ--  234 (260)
Q Consensus       169 d~~~-----~~~~~~-~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~--  234 (260)
                      ..|.     ....+. .=+++.|+| +++..  ..|..-+|.|++|+++++.+.++.|+.   .++++.+++..+-..  
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE  279 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE  279 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccc
Confidence            1111     111111 122344444 44443  567888999999999999999999887   778888877653221  


Q ss_pred             ----CCccHHHHHHHHHHhcccccc
Q psy7935         235 ----NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ----~~~~~~~il~~l~~~~~~~r~  255 (260)
                          ..++..+++.+|.+..+..|.
T Consensus       280 ~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  280 EDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             cCcCCCHHHHHHHHHHHHhChHhhc
Confidence                246678888888877766654

>KOG0603|consensus

Probab=99.58  E-value=4.9e-16  Score=133.52  Aligned_cols=211  Identities=15%  Similarity=0.124  Sum_probs=142.4

Q ss_pred             eccCCceeEEEEE-----EcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-E--eCCCchhhhhH
Q psy7935          24 FKQGAEGRIFKTE-----YLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-L--DDVQKSAIQTL   94 (260)
Q Consensus        24 lg~G~~g~V~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~--~~~~~~~~~~l   94 (260)
                      +|+|+||.|+.++     +.|+-++.|+..++.......      .....|-.++..++ ||.++ .  .-....-++..
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~------~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~   75 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDR------THTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLI   75 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccc------cccccHHHHHhhccCCCceeeeeeeeccccchhHh
Confidence            6899999999875     347888888765544322211      13445666777776 88887 1  11122223335


Q ss_pred             HHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          95 ISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        95 ~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      .+++.+..+      .....+.....+...++-+++++|+.+|+|||+|++||+++.+|++++.|||+++.....+..  
T Consensus        76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--  153 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--  153 (612)
T ss_pred             hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc--
Confidence            555554332      335667777778899999999999999999999999999999999999999999876554322  


Q ss_pred             cccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhc---cccCCccHHHHHHH
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY---RRQNRKQFETVMKT  245 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~il~~  245 (260)
                                  ++...+++++.........|-||+|.+.++++||-.|+.. +.+.+++...   +.+......+++..
T Consensus       154 ------------cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~-~~~~~Il~~~~~~p~~l~~~a~~~~~~  220 (612)
T KOG0603|consen  154 ------------CGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG-DTMKRILKAELEMPRELSAEARSLFRQ  220 (612)
T ss_pred             ------------ccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch-HHHHHHhhhccCCchhhhHHHHHHHHH
Confidence                        1222233444445577889999999999999999877776 6666666633   33333444555555


Q ss_pred             HHHhcccccc
Q psy7935         246 FAEVELRGRK  255 (260)
Q Consensus       246 l~~~~~~~r~  255 (260)
                      +..-.+.+|.
T Consensus       221 l~~r~p~nrL  230 (612)
T KOG0603|consen  221 LFKRNPENRL  230 (612)
T ss_pred             HHhhCHHHHh
Confidence            5555555543

>KOG0195|consensus

Probab=99.55  E-value=1.9e-15  Score=118.00  Aligned_cols=180  Identities=13%  Similarity=0.136  Sum_probs=128.4

Q ss_pred             cccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---CCCchhh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---DVQKSAI   91 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---~~~~~~~   91 (260)
                      ..+..+.+|.....|..|+|++.|..+++|++..+..+..      ....|..|.-.++-+.||||+ ..   +......
T Consensus       190 ~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~r------isrdfneefp~lrifshpnilpvlgacnsppnlv  263 (448)
T KOG0195|consen  190 SSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTAR------ISRDFNEEFPALRIFSHPNILPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchh------hcchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence            3356678899999999999999999999998766544321      135688899999999999999 22   2222221


Q ss_pred             --------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEEEE--eeccccc
Q psy7935          92 --------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLVMI--DFGLSQI  159 (260)
Q Consensus        92 --------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~kl~--DFg~~~~  159 (260)
                              ++|+..++++. .--.+..++.+++.++++|++|||+..  |.---|+...++||++.+++|+  |--++..
T Consensus       264 ~isq~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq  342 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ  342 (448)
T ss_pred             EeeeeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee
Confidence                    89999998876 455788889999999999999999874  5555688899999998887775  3221111


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccccc-----ccccceeEeecceeeeecccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQS-----YNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .            .|     -.+...+.+|+.++.     --...|+|||.+.+||+.|...|+.
T Consensus       343 e------------~g-----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfa  390 (448)
T KOG0195|consen  343 E------------VG-----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFA  390 (448)
T ss_pred             c------------cc-----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccc
Confidence            0            00     011122334444422     2245899999999999999988866

>KOG4158|consensus

Probab=99.52  E-value=3.4e-14  Score=116.45  Aligned_cols=157  Identities=15%  Similarity=0.103  Sum_probs=95.8

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc----CCcEEEEeecccccccc---cc
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS----DHHLVMIDFGLSQIKVS---TE  164 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~----~~~~kl~DFg~~~~~~~---~~  164 (260)
                      .+|.+|+..+.    .+.....-++.|+++|+.|||.+||.|||+|.+|||+.-    --.++|+|||++-....   .-
T Consensus       327 ~tLr~yl~~~~----~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlql  402 (598)
T KOG4158|consen  327 QTLREYLWTRH----RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQL  402 (598)
T ss_pred             hhHHHHHhcCC----CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccccccc
Confidence            67777776654    566666668999999999999999999999999999964    24688899998743322   11


Q ss_pred             cccccccccccceeeeeeeeeecCc---ccccc-ccccceeEeecceeeeeccccccccH--------HHHHHHHHhhcc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSK---GTLQS-YNHHLVMIDFGLSQIKVSTEDKAVDF--------RDMFNWILSSYR  232 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  232 (260)
                      +..++....|....   .++|+.+.   +.... --.++|.|+.|.+.||+....-|+.-        ...-+.=+-..+
T Consensus       403 py~S~~Vd~GGNa~---lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp  479 (598)
T KOG4158|consen  403 PYESDEVDLGGNAK---LMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP  479 (598)
T ss_pred             ccccccccCCCcce---ecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc
Confidence            11111111111111   12222111   11111 22578999999999999887777652        122222233334


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...++...+++-.+..-++..|.
T Consensus       480 ~~vpp~~rqlV~~lL~r~pskRv  502 (598)
T KOG4158|consen  480 SRVPPVARQLVFDLLKRDPSKRV  502 (598)
T ss_pred             ccCChHHHHHHHHHhcCCccccC
Confidence            44456666666666666665554

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.50  E-value=3.8e-14  Score=107.36  Aligned_cols=125  Identities=18%  Similarity=0.170  Sum_probs=89.7

Q ss_pred             ceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCchhhhhHHH
Q psy7935          21 AECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQKSAIQTLIS   96 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~~~~~~l~~   96 (260)
                      ++.++.|.++.||+++..++.+++|+......  .       ...+.+|+.++..+...+++    ..+....  +.+++
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~--~-------~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~--~lv~e   71 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE--L-------LINRENEAENSKLAAEAGIGPKLYYFDPETG--VLITE   71 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcc--c-------ccCHHHHHHHHHHHHHhCCCCceEEEeCCCC--eEEEE
Confidence            56789999999999999999999997432210  0       12356777777777544443    2222223  35899


Q ss_pred             hhccCcccccchHHHHHHHHHHHHHHHHHhhhCCc-----eecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          97 NLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNI-----IHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i-----~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ++.+..+...  ......++.+++.+|+.||+.++     +|+|++|.||+++ ++.++++||+.+..
T Consensus        72 ~i~G~~l~~~--~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          72 FIEGSELLTE--DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ecCCCccccc--cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            9988764321  11123356899999999999885     9999999999999 67899999998864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.49  E-value=1.3e-13  Score=119.13  Aligned_cols=141  Identities=13%  Similarity=0.154  Sum_probs=90.7

Q ss_pred             eeeccCCceeEEEEEE-cCccEEEEEeecccCCC---------------------------chhhHHH-----HHHHHHH
Q psy7935          22 ECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRH---------------------------PKLDEAL-----TKERITS   68 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~---------------------------~~~~~~~-----~~~~~~~   68 (260)
                      +.||.|++|.||+|+. .|++||||+..+.....                           ..+....     ..-.+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            6799999999999998 59999999864432100                           0000000     0113555


Q ss_pred             HHhhhcccC-----CCCeE---EeCCCchhhhhHHHhhccCcccccchHH----HHHHHHHHHHH-HHHHhhhCCceecC
Q psy7935          69 EIRGLMKCR-----MADIC---LDDVQKSAIQTLISNLDSQNITRENISD----IIKLLSIEIGT-TLSVMHSNNIIHGD  135 (260)
Q Consensus        69 e~~~l~~~~-----h~~i~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~----~~~~i~~~i~~-~l~~LH~~~i~H~d  135 (260)
                      |+..+.++.     ++++.   .+......-..++||+.+..+.......    ....++.+++. .+..+|..|++|+|
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D  282 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHAD  282 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCC
Confidence            666666553     34444   2221111123488888776542221111    12346666666 47889999999999


Q ss_pred             CCCCcEEEccCCcEEEEeecccccccc
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++|.||+++.++.++++|||++.....
T Consensus       283 ~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       283 LHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CCcccEEECCCCcEEEEeCCCeeECCH
Confidence            999999999999999999999977653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.48  E-value=2e-13  Score=104.63  Aligned_cols=138  Identities=15%  Similarity=0.228  Sum_probs=95.0

Q ss_pred             ceeeccCCceeEEEEEEc--------CccEEEEEeecccC--CCc--------hh--------hHHHHHHHHHHHHhhhc
Q psy7935          21 AECFKQGAEGRIFKTEYL--------GRSVLVKERFSKKY--RHP--------KL--------DEALTKERITSEIRGLM   74 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~--------~~~vavK~~~~~~~--~~~--------~~--------~~~~~~~~~~~e~~~l~   74 (260)
                      ...||.|-.+.||.|...        +.++|||+......  +..        .+        ..........+|+..|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            357899999999999864        37999998653321  100        00        01112223448999999


Q ss_pred             ccCCCCeE---EeCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHh-hhCCceecCCCCCcEEEc
Q psy7935          75 KCRMADIC---LDDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVM-HSNNIIHGDLTTSNMILS  144 (260)
Q Consensus        75 ~~~h~~i~---~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~L-H~~~i~H~dlkp~Nill~  144 (260)
                      ++...++.   .+......+  +|+|+.+..+      ...++......+..+++.+|..| |+.|++|+||+|.|||++
T Consensus        82 rl~~~Gv~vP~pi~~~~~~l--vME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~  159 (197)
T cd05146          82 RMQKAGIPCPEVVVLKKHVL--VMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH  159 (197)
T ss_pred             HHHHcCCCCCeEEEecCCEE--EEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE
Confidence            98765544   333445555  7777765321      11244455667889999999998 899999999999999997


Q ss_pred             cCCcEEEEeeccccccc
Q psy7935         145 SDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~  161 (260)
                       ++.++|+|||.+....
T Consensus       160 -~~~v~iIDF~qav~~~  175 (197)
T cd05146         160 -DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             -CCcEEEEECCCceeCC
Confidence             5789999999886553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.28  E-value=1.3e-11  Score=94.29  Aligned_cols=128  Identities=23%  Similarity=0.299  Sum_probs=83.4

Q ss_pred             eEEEEEE-cCccEEEEEeecccC-------------C-----CchhhHHHHHHHHHHHHhhhcccCCCCeE---EeCCCc
Q psy7935          31 RIFKTEY-LGRSVLVKERFSKKY-------------R-----HPKLDEALTKERITSEIRGLMKCRMADIC---LDDVQK   88 (260)
Q Consensus        31 ~V~~~~~-~~~~vavK~~~~~~~-------------~-----~~~~~~~~~~~~~~~e~~~l~~~~h~~i~---~~~~~~   88 (260)
                      .||.|.. .|.++|||+......             +     ++............+|.+.|.++...++.   .++...
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~   80 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR   80 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence            4899998 588999998543211             1     12223344566788999999999877653   455555


Q ss_pred             hhhhhHHHhhc--cCcccc----cchHHHHHHHHHHHHHHHHH-hhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAIQTLISNLD--SQNITR----ENISDIIKLLSIEIGTTLSV-MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~~~l~~~l~--~~~~~~----~~~~~~~~~i~~~i~~~l~~-LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+  +|+|+.  +.....    .++......++.+++..+.. +|..|++|+||.+.|||++.+ .+.|+|||.+....
T Consensus        81 ~~i--vME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen   81 NVI--VMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             TEE--EEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             CEE--EEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            566  889998  433211    11234456678888886555 579999999999999999976 99999999886654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1033|consensus

Probab=99.25  E-value=5.8e-13  Score=112.75  Aligned_cols=157  Identities=19%  Similarity=0.204  Sum_probs=105.8

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccc
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLY  171 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~  171 (260)
                      .+|.+++.+.......+......++.|++.|+.|   ++.+|+|+||.||....+..+||.|||+............   
T Consensus       341 ~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~---  414 (516)
T KOG1033|consen  341 ETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAP---  414 (516)
T ss_pred             hhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccc---
Confidence            6666777665556667888899999999999999   9999999999999999999999999999866544331100   


Q ss_pred             ccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccc-cccccHHHHHHHHHhhcc----ccCCccHHHHHH
Q psy7935         172 VLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTE-DKAVDFRDMFNWILSSYR----RQNRKQFETVMK  244 (260)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~il~  244 (260)
                       .......-.+...+++|+++  ..++.++||||+|++++|++.- ..+.+....+..+-.+..    ..+.|.-.+++.
T Consensus       415 -~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~~d~p~e~~ll~  493 (516)
T KOG1033|consen  415 -AAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFLQDYPEEYTLLQ  493 (516)
T ss_pred             -hhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHhhcCcHHHHHHH
Confidence             00011122233334566666  5699999999999999998872 222332222222222221    223445468888


Q ss_pred             HHHHhcccccc
Q psy7935         245 TFAEVELRGRK  255 (260)
Q Consensus       245 ~l~~~~~~~r~  255 (260)
                      +|...++..|.
T Consensus       494 ~lls~~p~~RP  504 (516)
T KOG1033|consen  494 QLLSPSPEERP  504 (516)
T ss_pred             HhcCCCcccCc
Confidence            88877777765

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.22  E-value=2.2e-11  Score=106.90  Aligned_cols=142  Identities=13%  Similarity=0.173  Sum_probs=82.1

Q ss_pred             cCcceeeccCCceeEEEEEE-c-CccEEEEEeecccCC---------------------------CchhhHHH-----HH
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-L-GRSVLVKERFSKKYR---------------------------HPKLDEAL-----TK   63 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-~-~~~vavK~~~~~~~~---------------------------~~~~~~~~-----~~   63 (260)
                      |+. +.+|+|++|.||+|+. . |++||||+..+....                           ........     ..
T Consensus       122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E  200 (537)
T PRK04750        122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE  200 (537)
T ss_pred             cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence            454 7899999999999998 3 899999997544210                           00000000     11


Q ss_pred             HHHHHHHhhhcccC----CCC-eE---EeC--CCchhhhhHHHhhccCccccc--chHH--HHHHHHHHHHHH-HHHhhh
Q psy7935          64 ERITSEIRGLMKCR----MAD-IC---LDD--VQKSAIQTLISNLDSQNITRE--NISD--IIKLLSIEIGTT-LSVMHS  128 (260)
Q Consensus        64 ~~~~~e~~~l~~~~----h~~-i~---~~~--~~~~~~~~l~~~l~~~~~~~~--~~~~--~~~~i~~~i~~~-l~~LH~  128 (260)
                      -.+.+|+..+.++.    +.+ +.   .+.  +....  .++||+.+..+...  +...  ....++...+.. +..+..
T Consensus       201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~V--LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~  278 (537)
T PRK04750        201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETV--MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR  278 (537)
T ss_pred             hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCce--EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence            23455555555553    222 21   221  12222  36777766543110  0000  001122222222 344557


Q ss_pred             CCceecCCCCCcEEEccCC----cEEEEeecccccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDH----HLVMIDFGLSQIKVS  162 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~----~~kl~DFg~~~~~~~  162 (260)
                      .|++|+|++|.||+++.++    .++++|||++...+.
T Consensus       279 ~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        279 DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            9999999999999999887    999999999977653

>KOG0590|consensus

Probab=99.17  E-value=5.1e-12  Score=112.86  Aligned_cols=194  Identities=15%  Similarity=0.103  Sum_probs=125.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCCC--
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDVQ--   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~~--   87 (260)
                      ..-+.+.+.||+|+|+.|-.....   ...++.|.+...  ..    ..........|..+-..+. |.|++ +.+..  
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~--~~----~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~   92 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIP--PK----SEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS   92 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCC--CC----ccchhhhcCccccccccccccccccccCCccCC
Confidence            455778889999999998887752   334444432211  11    1111345566777777776 99998 33321  


Q ss_pred             --chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCcEEEccCC-cEEEEeecc
Q psy7935          88 --KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMH-SNNIIHGDLTTSNMILSSDH-HLVMIDFGL  156 (260)
Q Consensus        88 --~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~i~H~dlkp~Nill~~~~-~~kl~DFg~  156 (260)
                        ....       +++++-+.... ....+......++.|+..++.|+| ..++.|+|+||+|.+++..+ ..+++|||+
T Consensus        93 ~~~~~~~~~~s~g~~~f~~i~~~~-~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~  171 (601)
T KOG0590|consen   93 PRSYLLSLSYSDGGSLFSKISHPD-STGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGL  171 (601)
T ss_pred             CcccccccCcccccccccccccCC-ccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchh
Confidence              1111       44554442111 113555666679999999999999 99999999999999999998 999999999


Q ss_pred             cccccc-cccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         157 SQIKVS-TEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       157 ~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |..+.. ......-....+   .++.++++++.... ++..+..|+||.|+++.-+++|..|++
T Consensus       172 At~~~~~~g~~~~~~~~~g---~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~  231 (601)
T KOG0590|consen  172 ATAYRNKNGAERSLKDRCG---SSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWD  231 (601)
T ss_pred             hccccccCCcceeeecccC---CCCCCCCcccccch-hhcCCCcccccccccccccccCCCCcc
Confidence            987765 222211111111   12222222222111 456788999999999999999988877

>KOG1023|consensus

Probab=99.14  E-value=3.9e-11  Score=103.09  Aligned_cols=120  Identities=20%  Similarity=0.249  Sum_probs=84.9

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCc-eecCCCCCcEEEccCCcEEEEeecccccccccc------
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNI-IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE------  164 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i-~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~------  164 (260)
                      |+|.|.+...  ...++..-...+.++++.||+|||+..| .|+.|+++|.+++..+.+||.|||+........      
T Consensus        32 Gsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~  109 (484)
T KOG1023|consen   32 GSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHH  109 (484)
T ss_pred             ccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccc
Confidence            7788877653  2346666677788999999999999876 999999999999999999999999987664311      


Q ss_pred             -cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc
Q psy7935         165 -DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       165 -~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                       .....+|..++.+......      ......+++.|+||||++++|+++.+.|++
T Consensus       110 ~~~~~~lw~aPellr~~~~~------~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~  159 (484)
T KOG1023|consen  110 PIRKALLWTAPELLRGALSQ------SLESALTQKGDIYSFGIIMYEILFRSGPFD  159 (484)
T ss_pred             hhHHHHhccCHHHhcccccc------cccccccccCCeehHHHHHHHHHhccCccc
Confidence             1111223333322210000      000235788999999999999998877765

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.12  E-value=4.5e-10  Score=88.71  Aligned_cols=140  Identities=17%  Similarity=0.152  Sum_probs=100.6

Q ss_pred             CcceeeccCCceeEEEEEEc-CccEEEEEeec--------ccCCCc------hhhHHHHHHHHHHHHhhhcccCCC--Ce
Q psy7935          19 QPAECFKQGAEGRIFKTEYL-GRSVLVKERFS--------KKYRHP------KLDEALTKERITSEIRGLMKCRMA--DI   81 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--------~~~~~~------~~~~~~~~~~~~~e~~~l~~~~h~--~i   81 (260)
                      .+.+.||-|--|.||.|.+. |.++|||.=..        +..+.-      .-+-...+....+|.+.|.++...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            45689999999999999995 99999996110        000000      011223466788999999998665  33


Q ss_pred             E-EeCCCchhhhhHHHhhccCccccc-chHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          82 C-LDDVQKSAIQTLISNLDSQNITRE-NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        82 ~-~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      + -.+.+...+  +|+++++..+-+. +..+....++..|++-+.-+-..|++|+|+++-||+++.+|.++++||.-+..
T Consensus       174 P~P~~~nRHaV--vMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         174 PKPIAWNRHAV--VMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVP  251 (304)
T ss_pred             CCcccccccee--eeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccccc
Confidence            3 455555555  8899888665221 24556666777788877777799999999999999999999999999986654


Q ss_pred             c
Q psy7935         160 K  160 (260)
Q Consensus       160 ~  160 (260)
                      .
T Consensus       252 ~  252 (304)
T COG0478         252 I  252 (304)
T ss_pred             C
Confidence            3

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.00  E-value=2.6e-09  Score=86.44  Aligned_cols=135  Identities=20%  Similarity=0.217  Sum_probs=86.4

Q ss_pred             eeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHH-----HHHHHHHHHHhhhcccCCCCeE-----EeCCC----
Q psy7935          22 ECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEA-----LTKERITSEIRGLMKCRMADIC-----LDDVQ----   87 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~-----~~~~~----   87 (260)
                      +.+-...-..|+++...|+.+.||........  .+...     .....+.+|+..+.++...+|.     .+...    
T Consensus        28 e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~--~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~  105 (268)
T PRK15123         28 EVFRELEGRRTLRFELAGKSYFLKWHRGTGWG--EIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP  105 (268)
T ss_pred             cEEecCCCceEEEEEECCEEEEEEEecCCcHH--HHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence            44454555567788888999999975322211  00000     0011477888888777544443     22211    


Q ss_pred             ---chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-------CCcE
Q psy7935          88 ---KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-------DHHL  149 (260)
Q Consensus        88 ---~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-------~~~~  149 (260)
                         ...+        .+|.+++..+. ....+......++.+++..+.-||++||+|+|++++|||++.       +..+
T Consensus       106 ~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~  184 (268)
T PRK15123        106 ATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKL  184 (268)
T ss_pred             ccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceE
Confidence               1112        24555543321 123445566779999999999999999999999999999975       5789


Q ss_pred             EEEeeccccc
Q psy7935         150 VMIDFGLSQI  159 (260)
Q Consensus       150 kl~DFg~~~~  159 (260)
                      .++||+.+..
T Consensus       185 ~LIDl~r~~~  194 (268)
T PRK15123        185 SVIDLHRAQI  194 (268)
T ss_pred             EEEECCcccc
Confidence            9999998854

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.97  E-value=3.7e-09  Score=83.33  Aligned_cols=134  Identities=14%  Similarity=0.209  Sum_probs=93.3

Q ss_pred             ceeeccCCceeEEEEEEcC-ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe-----EEeCCCc---hhh
Q psy7935          21 AECFKQGAEGRIFKTEYLG-RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI-----CLDDVQK---SAI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~---~~~   91 (260)
                      .+.++.|..+.||+++..+ +.+++|........       .....+.+|.++++.+.+.++     +......   ...
T Consensus         3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~   75 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP   75 (223)
T ss_pred             ceecCCCccceEEEEEecCCcceEEEeCCCcccC-------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence            4678999999999998864 89999974322110       012357788888888765333     3222221   123


Q ss_pred             hhHHHhhccCcccc-----cchHHHHHHHHHHHHHHHHHhhh--------------------------------------
Q psy7935          92 QTLISNLDSQNITR-----ENISDIIKLLSIEIGTTLSVMHS--------------------------------------  128 (260)
Q Consensus        92 ~~l~~~l~~~~~~~-----~~~~~~~~~i~~~i~~~l~~LH~--------------------------------------  128 (260)
                      +.+++++.+..+..     .+++.....++.+++.+|..||+                                      
T Consensus        76 ~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (223)
T cd05154          76 FYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP  155 (223)
T ss_pred             eEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence            56888888765522     24566677788888888888884                                      


Q ss_pred             ------------------CCceecCCCCCcEEEcc--CCcEEEEeeccccccc
Q psy7935         129 ------------------NNIIHGDLTTSNMILSS--DHHLVMIDFGLSQIKV  161 (260)
Q Consensus       129 ------------------~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~~~~  161 (260)
                                        ..++|+|+.|.||+++.  ++.+.|+||+.+..-.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~  208 (223)
T cd05154         156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD  208 (223)
T ss_pred             HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence                              13599999999999998  6778999999886543

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK09902 hypothetical protein; Provisional

Probab=98.96  E-value=5.7e-09  Score=80.45  Aligned_cols=133  Identities=12%  Similarity=0.192  Sum_probs=93.8

Q ss_pred             ccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc------hh---
Q psy7935          25 KQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK------SA---   90 (260)
Q Consensus        25 g~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~------~~---   90 (260)
                      |+|+.|-|++....|+.+-+|.-..+..+.-..  ......|.+|+..+.++...++.     +.....      ..   
T Consensus        27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~--P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRY--PFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeCCcEEEEEeccCcccccccC--CCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            568999999988888888888732122211110  22357899999999999766555     222110      11   


Q ss_pred             -----hhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc--EEEEeecccccc
Q psy7935          91 -----IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH--LVMIDFGLSQIK  160 (260)
Q Consensus        91 -----~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~--~kl~DFg~~~~~  160 (260)
                           .-+|.+++..+.. ...++.....++.+++..+.-||+.|+.|+|+.+.||+++.++.  ++++||.-++..
T Consensus       105 e~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~~  180 (216)
T PRK09902        105 EDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRR  180 (216)
T ss_pred             EeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccchh
Confidence                 1567677655442 23456666678999999999999999999999999999986666  999999877543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.93  E-value=1.5e-09  Score=84.74  Aligned_cols=131  Identities=26%  Similarity=0.325  Sum_probs=82.1

Q ss_pred             cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE------EeCCCch-----hh--------hhHHHhh
Q psy7935          38 LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC------LDDVQKS-----AI--------QTLISNL   98 (260)
Q Consensus        38 ~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~------~~~~~~~-----~~--------~~l~~~l   98 (260)
                      .++.+-+|....+..... +..........+|+..+..+...+|.      +......     .+        .+|.+++
T Consensus        31 ~~~~y~~k~~~~~~~~~~-~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~  109 (206)
T PF06293_consen   31 VGRRYYRKRLWNKLRRDR-LRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLL  109 (206)
T ss_pred             cceEEEECCeechhccch-hhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHH
Confidence            355566665433322221 11113345678888888877655544      2111111     11        3455554


Q ss_pred             ccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---cEEEEeeccccccc-ccccccccccc
Q psy7935          99 DSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---HLVMIDFGLSQIKV-STEDKAVDLYV  172 (260)
Q Consensus        99 ~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---~~kl~DFg~~~~~~-~~~~~~~d~~~  172 (260)
                      ....   ..+......++.+++..+.-||++||+|+|++|.|||++.+.   .+.++||+-+.... .......|+..
T Consensus       110 ~~~~---~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~~~~~~~~dL~~  184 (206)
T PF06293_consen  110 QQWE---QLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPSSRRWRAKDLAR  184 (206)
T ss_pred             Hhhc---ccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCCChHHHHHhHHH
Confidence            4422   145566777899999999999999999999999999999877   89999999887655 22333344433

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601|consensus

Probab=98.91  E-value=6.3e-10  Score=96.02  Aligned_cols=190  Identities=18%  Similarity=0.141  Sum_probs=129.8

Q ss_pred             cccCcceeecc--CCceeEEEEEE----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----E
Q psy7935          16 MVLQPAECFKQ--GAEGRIFKTEY----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----L   83 (260)
Q Consensus        16 ~~~~~~~~lg~--G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~   83 (260)
                      ..+...+.+|.  |.+|.||.+..    .+..+|+|. -....+.+..     ...-.+|+...+++. |+|.+     |
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~-s~~p~s~p~~-----~~~k~~~~~s~~~i~~~~~~v~~~~~~  187 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKK-SKIPFSPPLD-----SKRKLREFLSHHKIDSHENPVRDSPAW  187 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCccccccc-ccCCCCCccc-----cccccchhhcccccCccccccccCccc
Confidence            34677888999  99999999886    377888885 2222222221     234456777777773 77776     3


Q ss_pred             eCCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHH----HHHHhhhCCceecCCCCCcEEEccC-CcEEEE
Q psy7935          84 DDVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGT----TLSVMHSNNIIHGDLTTSNMILSSD-HHLVMI  152 (260)
Q Consensus        84 ~~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~i~H~dlkp~Nill~~~-~~~kl~  152 (260)
                      .+....++      .++.+|+....  ..++...++..+.+..+    ||.++|+.+++|-|+||+||++..+ ..+++.
T Consensus       188 e~~~~lfiqtE~~~~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  188 EGSGILFIQTELCGESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             ccCCcceeeeccccchhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecC
Confidence            33333333      77888887653  34777888888899999    9999999999999999999999998 899999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      |||+.....+......    ..+. ....+..-+..++.. .-++...|++++|.+..+..++...+
T Consensus       266 df~~v~~i~~~~~~~~----~~~~-~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSV----FKVS-KRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             CcceeEEccCCccccc----eeee-ecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc
Confidence            9999887765542211    0001 111111122233333 55778899999999999877765443

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.88  E-value=2.2e-08  Score=74.33  Aligned_cols=131  Identities=17%  Similarity=0.230  Sum_probs=92.4

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--EeCCCchhhhhHH
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--LDDVQKSAIQTLI   95 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~~~~~~~~~l~   95 (260)
                      .++.+.|+.|.+|.||+|.+.|.++|+|+.....          .+..+..|++++..+.-.++-  ++......+  .|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds----------~r~~l~kEakiLeil~g~~~~p~vy~yg~~~i--~m   91 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS----------PRRNLEKEAKILEILAGEGVTPEVYFYGEDFI--RM   91 (201)
T ss_pred             hhhhhhhhcccccEEEEeeccCceEEEEEecCCc----------chhhHHHHHHHHHHhhhcCCCceEEEechhhh--hh
Confidence            5678899999999999999999999999854332          156788999999888766555  333333334  49


Q ss_pred             HhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCC-CCcEEEccCCcEEEEeeccccccc
Q psy7935          96 SNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT-TSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        96 ~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk-p~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      +|+.+.+++....... .+-...+++.---|-..||-|..|+ |...++.+++.+.|+||..|+...
T Consensus        92 e~i~G~~L~~~~~~~~-rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~  157 (201)
T COG2112          92 EYIDGRPLGKLEIGGD-RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFKK  157 (201)
T ss_pred             hhhcCcchhhhhhccc-HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhcc
Confidence            9999876433222111 2234456666555666799999996 555666667799999999987443

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.73  E-value=8.5e-08  Score=75.21  Aligned_cols=138  Identities=17%  Similarity=0.212  Sum_probs=90.6

Q ss_pred             ceeeccCCceeEEEEEE-cCccEEEEEeecccCCCch----------------hhHHHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          21 AECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPK----------------LDEALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~----------------~~~~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      ...|+.|--+.||+|.. .+..+|+|++......-..                -..........+|+..|.++...++. 
T Consensus        53 ~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          53 VGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             EeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            45788888999999986 5899999996544321111                00011122355677777777544433 


Q ss_pred             --EeCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEe
Q psy7935          83 --LDDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        83 --~~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                        =+....+.+  +|+|+.....      .-.+.......+..++++.+.-|-. .+++|+||+.-|||+. ++.+.|+|
T Consensus       133 P~Pi~~~~nVL--vMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID  209 (268)
T COG1718         133 PEPIAFRNNVL--VMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIID  209 (268)
T ss_pred             CCceeecCCeE--EEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEE
Confidence              122222233  5666654321      1112333577788899999888877 8999999999999999 89999999


Q ss_pred             eccccccc
Q psy7935         154 FGLSQIKV  161 (260)
Q Consensus       154 Fg~~~~~~  161 (260)
                      ||-|....
T Consensus       210 ~~QaV~~~  217 (268)
T COG1718         210 VSQAVTID  217 (268)
T ss_pred             CccccccC
Confidence            99886654

>KOG0601|consensus

Probab=98.72  E-value=2.1e-08  Score=86.74  Aligned_cols=181  Identities=16%  Similarity=0.065  Sum_probs=113.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDV   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~   86 (260)
                      ..|..+..||.|.|+.|+.+..+   +..+++|.........  .++    ..-..|+.....+ .|.+.+     |...
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~--~~d----i~sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF--ASD----IFSLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch--Hhh----hcchhhhhHhhHhhcccccCCCCCCcccc
Confidence            45777999999999999998753   6677777643322211  111    1122233322222 233333     5554


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-CcEEEEeeccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-~~~kl~DFg~~~~  159 (260)
                      ...++  =.||+.+...      ...+.+...+++..|++.++.++|++.++|+|+||+||++.++ +..++.|||+++.
T Consensus       339 r~~~i--p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  339 RQGYI--PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             ccccC--chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence            44443  3334433221      3357788888899999999999999999999999999999985 8999999999864


Q ss_pred             ccccc--cccccccc-cccceeeeeeeeeecCccccccccccceeEeecceeeeeccccc
Q psy7935         160 KVSTE--DKAVDLYV-LKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       160 ~~~~~--~~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      +....  ....|-+. ..+.            ..+......+.|++|||....+..++..
T Consensus       417 ~~~~~~~~~~~~r~~p~~~~------------~~e~~~~~~~~~~~sl~~~~~e~~~~~~  464 (524)
T KOG0601|consen  417 LAFSSGVFHHIDRLYPIAEI------------LLEDYPHLSKADIFSLGLSVDEAITGSP  464 (524)
T ss_pred             cceecccccccccccccchh------------hccccccccccccccccccccccccCcc
Confidence            32211  01111100 0000            0122457788999999999888887743

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.69  E-value=5.7e-08  Score=75.30  Aligned_cols=140  Identities=16%  Similarity=0.185  Sum_probs=86.1

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCch-hhHHHHHHHHHHHHhhhcccCCCCeE-------EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPK-LDEALTKERITSEIRGLMKCRMADIC-------LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~~~~~e~~~l~~~~h~~i~-------~~~~   86 (260)
                      .+.+...+.+.......|.+....|+.+++|....+.-+... +..-.......+.+....+++..++.       ...-
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ek  109 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEK  109 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeee
Confidence            344666777777777788888788999999974333211100 11111112234445544444332222       1110


Q ss_pred             Cch-h---hhhHHHhhccCccccc--chHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKS-A---IQTLISNLDSQNITRE--NISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~-~---~~~l~~~l~~~~~~~~--~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ... .   ...++||+++..+...  +++    .++..+.+++.-||+.|+.|+|..|.|++++. +.++++||+..+.
T Consensus       110 k~~~~~~~~~ll~EYIeG~~l~d~~~i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~~  183 (229)
T PF06176_consen  110 KIFRYTSSYVLLMEYIEGVELNDIEDIDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSN-NGIRIIDTQGKRM  183 (229)
T ss_pred             eeccceeEEEEEEEEecCeecccchhcCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEEC-CcEEEEECccccc
Confidence            000 0   1358999998764222  222    35567888999999999999999999999995 5599999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1243|consensus

Probab=98.65  E-value=6.7e-08  Score=84.89  Aligned_cols=169  Identities=14%  Similarity=0.112  Sum_probs=101.8

Q ss_pred             eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC--chhh-----
Q psy7935          22 ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ--KSAI-----   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~--~~~~-----   91 (260)
                      +...-++.+..-.|..  .+.+|.|.......-    .    ......+-++.++.++||||+ +++..  ...+     
T Consensus        18 e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~----~----~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE   89 (690)
T KOG1243|consen   18 EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG----E----VTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE   89 (690)
T ss_pred             ccccCCCcccccccceeccCCceEEEEEeCCCc----h----hhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence            4445555443322333  488898887544331    1    123455667789999999999 43321  1112     


Q ss_pred             --hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          92 --QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMH-SNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        92 --~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                        ..|-.++..      +......--+.||+.||.||| +.+++|++|.-..++++..|.-||++|.++.........+.
T Consensus        90 rV~Pl~~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~  163 (690)
T KOG1243|consen   90 RVRPLETVLKE------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAK  163 (690)
T ss_pred             ccccHHHHHHH------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccc
Confidence              333333332      334555557899999999998 56899999999999999999999999998754332221111


Q ss_pred             cccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccc
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      ..|....       ..   .|....+-.-..|.|.||+..+++..|
T Consensus       164 ~~~~~~s-------~~---~P~~~~~s~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  164 SLYLIES-------FD---DPEEIDPSEWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cchhhhc-------cc---ChhhcCccccchhhhhHHHHHHHHhCc
Confidence            1111000       00   011111111346999999999988777

>KOG3741|consensus

Probab=98.52  E-value=6.3e-07  Score=76.88  Aligned_cols=132  Identities=12%  Similarity=0.148  Sum_probs=90.6

Q ss_pred             ceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC------chhh
Q psy7935          21 AECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ------KSAI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~------~~~~   91 (260)
                      ++..+.-.-...|++..+  |..+++|++  +..+....      .....-++.++++.|+|++ |.+..      ...+
T Consensus       281 l~~~~~~~~~Ttyk~~s~~DG~~YvLkRl--hg~r~~~~------nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~Sl  352 (655)
T KOG3741|consen  281 LELLNDLFSITTYKATSNVDGNAYVLKRL--HGDRDQST------NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSL  352 (655)
T ss_pred             cccccccccceeEeeeeccCCceeeeeee--ccccccCc------ccchHHHHHHHHhccCceeehhhhhhhhccCcceE
Confidence            344444234578999884  888888875  22222111      1122346789999999999 22221      1111


Q ss_pred             ----------hhHHHhhccCcc------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcE
Q psy7935          92 ----------QTLISNLDSQNI------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHL  149 (260)
Q Consensus        92 ----------~~l~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~  149 (260)
                                .+|+|+--....            +...++..+|.++.|+..||.++|+.|+..+=|.|.+||++++.++
T Consensus       353 vlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RI  432 (655)
T KOG3741|consen  353 VLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRI  432 (655)
T ss_pred             EEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceE
Confidence                      556555322111            4458899999999999999999999999999999999999998899


Q ss_pred             EEEeecccccc
Q psy7935         150 VMIDFGLSQIK  160 (260)
Q Consensus       150 kl~DFg~~~~~  160 (260)
                      +|+..|+.-..
T Consensus       433 riS~C~i~Dvl  443 (655)
T KOG3741|consen  433 RISGCGIMDVL  443 (655)
T ss_pred             EEecccceeee
Confidence            99987776433

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.48  E-value=5e-07  Score=79.27  Aligned_cols=136  Identities=15%  Similarity=0.200  Sum_probs=82.0

Q ss_pred             eeeccCCceeEEEEEEc-CccEEEEEeecccCC---------------------------CchhhHHH-----HHHHHHH
Q psy7935          22 ECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYR---------------------------HPKLDEAL-----TKERITS   68 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~---------------------------~~~~~~~~-----~~~~~~~   68 (260)
                      +.|+.+|-|.||+|+.. |++||||+..+..-.                           ...+.+..     ..-.+.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            78899999999999985 999999984332110                           00000000     0112444


Q ss_pred             HHhhhcccC-----CCCeE-----EeCCCchhhhhHHHhhccCccccc-------chHHHHHHHHHHHHHH-HHHhhhCC
Q psy7935          69 EIRGLMKCR-----MADIC-----LDDVQKSAIQTLISNLDSQNITRE-------NISDIIKLLSIEIGTT-LSVMHSNN  130 (260)
Q Consensus        69 e~~~l~~~~-----h~~i~-----~~~~~~~~~~~l~~~l~~~~~~~~-------~~~~~~~~i~~~i~~~-l~~LH~~~  130 (260)
                      |+..+.+++     .+++.     +.-+.+..+  .+||+.+......       .+.+   .++..++.+ ++.+-..|
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VL--tmE~i~Gi~i~d~~~l~~~g~d~k---~ia~~~~~~f~~q~~~dg  285 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVL--TMEWIDGIKISDIAALKSAGIDRK---ELAELLVRAFLRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEE--EEEeeCCEecccHHHHHhcCCCHH---HHHHHHHHHHHHHHHhcC
Confidence            554444442     23333     111233333  6777776543111       2222   233444443 44455689


Q ss_pred             ceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++|.|..|.||+++.+|.+.+.|||+.....+
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            99999999999999999999999999876653

>KOG2268|consensus

Probab=98.44  E-value=4e-07  Score=74.21  Aligned_cols=139  Identities=17%  Similarity=0.185  Sum_probs=97.7

Q ss_pred             ccCcceeeccCCceeEEEEEEc-CccEEEEEeec-----------c---cCCCchhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFS-----------K---KYRHPKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~-----------~---~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      .+.+.++||-|--+.||.+-+. |.+.++|.=..           +   ..++...+-...+-+..+|+..++.+.-..+
T Consensus        93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            3567899999999999999985 88999985110           0   0111111222345567788888888865444


Q ss_pred             E---EeCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          82 C---LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        82 ~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      .   -++.+..++  +|+++.+.++-+.-.....-.+...++.-+.-|..+|++|+|..--|||++.++.++++||.-.
T Consensus       173 pVPkpiD~~RH~V--vmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  173 PVPKPIDHNRHCV--VMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             CCCCcccccceee--HHHhhcccceeeeeecCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEEeechHh
Confidence            3   666666666  8888888765222222222334566666778889999999999999999999999999999754

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.43  E-value=1.4e-06  Score=68.99  Aligned_cols=126  Identities=15%  Similarity=0.135  Sum_probs=72.2

Q ss_pred             ceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-----CCeEEeCCCchhhhhHH
Q psy7935          21 AECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-----ADICLDDVQKSAIQTLI   95 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----~~i~~~~~~~~~~~~l~   95 (260)
                      ...||+|..+.||+.  .+..+++|.... ..         ......+|.++++.+..     |.++.........+.++
T Consensus         6 ~~~i~~G~t~~~y~~--~~~~~VlR~~~~-~~---------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~   73 (226)
T TIGR02172         6 WTQTGEGGNGESYTH--KTGKWMLKLYNP-GF---------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIY   73 (226)
T ss_pred             heeecCCCCcceeEe--cCCCEEEEeCCC-CC---------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeee
Confidence            578999999999984  366788897432 11         12345677777766643     33332221222233456


Q ss_pred             HhhccCc-cc--ccchHHHHHHHHHHHHHHHHHhhh-------------------------------------------C
Q psy7935          96 SNLDSQN-IT--RENISDIIKLLSIEIGTTLSVMHS-------------------------------------------N  129 (260)
Q Consensus        96 ~~l~~~~-~~--~~~~~~~~~~i~~~i~~~l~~LH~-------------------------------------------~  129 (260)
                      +++.+.. ..  ...+......++.++++.+.-||+                                           .
T Consensus        74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~  153 (226)
T TIGR02172        74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS  153 (226)
T ss_pred             eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence            6665532 00  001111222233333333333331                                           1


Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .++|+|+.|.||+++.++ +.++||+.+..
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            368999999999999877 99999998754

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.24  E-value=3.5e-06  Score=70.87  Aligned_cols=177  Identities=12%  Similarity=0.171  Sum_probs=109.8

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE---------EeCCC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC---------LDDVQ   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~---------~~~~~   87 (260)
                      ......||+|+.+.+|-.-.-+..|| |++......     -+      ....+.+... .||-+.         +++.+
T Consensus        13 i~~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa-----~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~   80 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPA-----AQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGR   80 (637)
T ss_pred             cCCCccccCCccceeeecchhhchhh-eeecCCCch-----HH------HHHHHHhccCCCCcchhhhhcccHHHhhCCC
Confidence            34467899999999997655444454 765432211     11      1112222222 344332         45544


Q ss_pred             chh-hhhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          88 KSA-IQTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        88 ~~~-~~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      +.. +|.||-.+.+...             -+...+.-+++.++.++.+.+.||++|..-+|++++|+|++.++.+.|+|
T Consensus        81 ~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248          81 RGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             ccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEc
Confidence            443 4666666655432             22366788888999999999999999999999999999999999999998


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeeccc-cccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTE-DKAV  218 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~-~~~~  218 (260)
                      =..-.....           +..+.+.++.+ +|.|++.        ..-++..|-|.+++.+++++.| +.|.
T Consensus       161 sDsfqi~~n-----------g~~~~cpVg~~-eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPy  222 (637)
T COG4248         161 SDSFQINAN-----------GTLHLCPVGVS-EFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY  222 (637)
T ss_pred             ccceeeccC-----------CceEecccCcc-ccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCC
Confidence            543322211           11222222222 3333333        2355778999999999998776 5553

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.23  E-value=2.2e-06  Score=67.89  Aligned_cols=47  Identities=15%  Similarity=0.109  Sum_probs=34.6

Q ss_pred             ceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC
Q psy7935          21 AECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR   77 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~   77 (260)
                      ++.++.|..+.||++...++.+++|.....          .....+.+|..+++.+.
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~----------~~~~~~~~e~~~~~~l~   48 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP----------DAAERLRREAAVLRQLA   48 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSH----------HHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCC----------CCHHHHHHHHHHHHHHH
Confidence            578899999999999998789999973221          12345667777777664

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>KOG1266|consensus

Probab=98.06  E-value=1.3e-06  Score=70.95  Aligned_cols=116  Identities=16%  Similarity=0.172  Sum_probs=75.1

Q ss_pred             hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhC--CceecCCCCCcEEEccCCcEEEEeecccccccccccccc
Q psy7935          92 QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSN--NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV  168 (260)
Q Consensus        92 ~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~--~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~  168 (260)
                      +++..||+.-.. ++.+....+.+|+.||+.||.|||+.  .|+|+++-.+.|++..+|.+|+.--...........  +
T Consensus       157 gs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~--~  234 (458)
T KOG1266|consen  157 GSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNS--T  234 (458)
T ss_pred             hhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhh--h
Confidence            778888765322 56788899999999999999999987  599999999999999999998874332222111110  0


Q ss_pred             cccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccc
Q psy7935         169 DLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       169 d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      +...  .   ..-++.+.++.+..   ...+..+|||+||...+++..+
T Consensus       235 ~~~E--k---~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail  278 (458)
T KOG1266|consen  235 REAE--K---SVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL  278 (458)
T ss_pred             hHhh--h---hccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence            0000  0   01122233333222   3355679999999776665443

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.00  E-value=5.1e-05  Score=60.86  Aligned_cols=30  Identities=27%  Similarity=0.444  Sum_probs=26.7

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .++|+|+.|.|||++++..+.|+||+.+..
T Consensus       164 ~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         164 VVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             EEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            489999999999999987888999998754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=97.99  E-value=2.9e-06  Score=77.90  Aligned_cols=117  Identities=9%  Similarity=0.028  Sum_probs=74.2

Q ss_pred             eecCCCCC-cEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeeccee
Q psy7935         132 IHGDLTTS-NMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQ  208 (260)
Q Consensus       132 ~H~dlkp~-Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~  208 (260)
                      -+++..|. |++++.+...++.|||.++........    +..+.    .+++..+.+|+..  ..+++++|+||+||++
T Consensus       499 ~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~----~~~~~----~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il  570 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAP----VEGER----ILGTPDYLAPELLLGKPHGPAVDWWALGVCL  570 (669)
T ss_pred             CCCCCCCCCceeECCccccccccCCCchhhhccccc----ccCCc----eeeCccccCHHHcCCCCCCcHHHHHHHHHHH
Confidence            44555666 666676777888899988665433211    11111    2333334444433  4578899999999999


Q ss_pred             eeecccccccc---HHHHHHHHHhhccc------cCCccHHHHHHHHHHhccccccc
Q psy7935         209 IKVSTEDKAVD---FRDMFNWILSSYRR------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       209 ~~~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +|+++|..|+.   ..+++..++.....      .....+.+++..|...++..|..
T Consensus       571 ~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~~R~t  627 (669)
T cd05610         571 FEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAG  627 (669)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhHCcC
Confidence            99999988876   55666666543211      11334567888888888877764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG2137|consensus

Probab=97.96  E-value=9.8e-06  Score=71.88  Aligned_cols=98  Identities=10%  Similarity=0.209  Sum_probs=67.0

Q ss_pred             HHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--
Q psy7935         117 IEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--  192 (260)
Q Consensus       117 ~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--  192 (260)
                      .+.+.|+.|+|.. +++|++|.|++|.++.++..||+.|+.+.....+.....+.|..+....  ......+ .++..  
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~--~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLL--LQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChh--hccCcccccchhhcc
Confidence            3455899999976 7999999999999999999999999988766554444444443332221  1111112 22222  


Q ss_pred             ccccccceeEeecceeeeeccccc
Q psy7935         193 QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       193 ~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                      ...++++|++|+|+..+.+-.+.+
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk  207 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGK  207 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCc
Confidence            346688999999999888764444

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.87  E-value=8.9e-05  Score=59.05  Aligned_cols=33  Identities=21%  Similarity=0.404  Sum_probs=28.3

Q ss_pred             CceecCCCCCcEEEcc-CCcEEEEeecccccccc
Q psy7935         130 NIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~  162 (260)
                      +++|+|+.+.|||++. ++.+.++||..|.....
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence            6999999999999997 57899999998865433

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.83  E-value=5e-05  Score=62.73  Aligned_cols=31  Identities=29%  Similarity=0.468  Sum_probs=27.3

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .+++|+|+.|.|+|++.++.+.|+||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            3699999999999999877778999998754

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.82  E-value=3.3e-05  Score=62.47  Aligned_cols=32  Identities=19%  Similarity=0.298  Sum_probs=27.0

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++|+|+.|.||+++.++ +.++||..+..-..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI  178 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence            489999999999999876 78999998865443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.78  E-value=0.00013  Score=58.24  Aligned_cols=31  Identities=29%  Similarity=0.532  Sum_probs=26.3

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      +++|+|+.|.|||++.+...-|+||+.+..-
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~g  195 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGVG  195 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccCcC
Confidence            4899999999999997666679999987543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG0606|consensus

Probab=97.78  E-value=8.9e-06  Score=75.24  Aligned_cols=236  Identities=15%  Similarity=0.111  Sum_probs=133.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE--EeC-CCch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC--LDD-VQKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~--~~~-~~~~   89 (260)
                      .+.+.+.+.+-+|+++.++.++-.  |.-.++|+....    +.+... ..+....+-.+.-...+|-++  +.. ....
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~a----p~i~~~-~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs  877 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLA----PKIRTN-DYESIRSKSNILITPRSPAVVRSFPSFPCRS  877 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccc----hhhccc-cccccCCccCccccCCCCceecccCCCCCCC
Confidence            345666778888999988887753  433344431110    111000 011122222222223344444  222 1233


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ..+.++++++++.+      ..+.+.....-....+..++++||+..+.|+|++|.|+++..+++.++.||+........
T Consensus       878 P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~  957 (1205)
T KOG0606|consen  878 PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI  957 (1205)
T ss_pred             CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccc
Confidence            34667787765443      223555556667778899999999999999999999999999999999999844322110


Q ss_pred             --------ccc-----------cccccccc--cceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-
Q psy7935         164 --------EDK-----------AVDLYVLK--RNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-  219 (260)
Q Consensus       164 --------~~~-----------~~d~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-  219 (260)
                              ...           ..+.....  +.-....+...+..|+..  ..-...+|.|+.|..+++.++|.-|+. 
T Consensus       958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen  958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred             cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence                    000           00000110  001112222223333333  345667899999999999999988777 


Q ss_pred             --HHHHHHHHHhhccccC------CccHHHHHHHHHHhcccccc
Q psy7935         220 --FRDMFNWILSSYRRQN------RKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       220 --~~~~~~~~~~~~~~~~------~~~~~~il~~l~~~~~~~r~  255 (260)
                        ..+.++.++......-      ...+.+...++...+.-.|.
T Consensus      1038 ~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~ 1081 (1205)
T KOG0606|consen 1038 ETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRL 1081 (1205)
T ss_pred             cchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhcc
Confidence              6777777776543321      23445555555544444443

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.75  E-value=0.00017  Score=55.50  Aligned_cols=130  Identities=17%  Similarity=0.161  Sum_probs=81.3

Q ss_pred             cccCcceeeccCCc-eeEEEEEEcCccEEEEEeecccCCCch-----hhH--------HHHHHHHHHHHhhhcccC---C
Q psy7935          16 MVLQPAECFKQGAE-GRIFKTEYLGRSVLVKERFSKKYRHPK-----LDE--------ALTKERITSEIRGLMKCR---M   78 (260)
Q Consensus        16 ~~~~~~~~lg~G~~-g~V~~~~~~~~~vavK~~~~~~~~~~~-----~~~--------~~~~~~~~~e~~~l~~~~---h   78 (260)
                      ..++.++.||.|.- |.||+++..|+.+|+|+...-.+..+.     ...        ......|..|-..+.+++   +
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            45778999999999 999999999999999982221122121     110        011235777877777775   3


Q ss_pred             CCe--E-EeCCCc----hhh----------------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy7935          79 ADI--C-LDDVQK----SAI----------------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGD  135 (260)
Q Consensus        79 ~~i--~-~~~~~~----~~~----------------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~d  135 (260)
                      .++  + +++.-.    .-+                +.+.||+....   .++    ..-+.+|.+-+..+|..||+=+|
T Consensus       117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---~~~----~~~~~~~~~dl~~~~k~gI~~~D  189 (207)
T PF13095_consen  117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---PLQ----IRDIPQMLRDLKILHKLGIVPRD  189 (207)
T ss_pred             cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---ccc----hhHHHHHHHHHHHHHHCCeeecc
Confidence            344  2 222110    000                22333332221   122    23456788889999999999999


Q ss_pred             CCCCcEEEccCCcEEEEeeccc
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~  157 (260)
                      +++.|..     .-+|+|||.+
T Consensus       190 v~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  190 VKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             Ccccccc-----CCEEEecccC
Confidence            9999998     3489999864

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.68  E-value=0.00023  Score=59.17  Aligned_cols=31  Identities=29%  Similarity=0.463  Sum_probs=27.6

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .+++|+|+.+.|++++.++.+.|+||+.+..
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            5799999999999999887778999998754

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2270|consensus

Probab=97.60  E-value=0.00037  Score=58.26  Aligned_cols=138  Identities=16%  Similarity=0.188  Sum_probs=92.1

Q ss_pred             CcceeeccCCceeEEEEEE-cCccEEEEEeecccC--CCc----------------hhhHHHHHHHHHHHHhhhcccCCC
Q psy7935          19 QPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKY--RHP----------------KLDEALTKERITSEIRGLMKCRMA   79 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~----------------~~~~~~~~~~~~~e~~~l~~~~h~   79 (260)
                      ++-..|..|--+.||.++. .|..+|||++.....  ...                .-....-+-...+|+..|.++...
T Consensus       147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            4456788899999999997 488999998643321  000                001111233567788888888776


Q ss_pred             CeEE---eCCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCcEEEccCCcE
Q psy7935          80 DICL---DDVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMH-SNNIIHGDLTTSNMILSSDHHL  149 (260)
Q Consensus        80 ~i~~---~~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH-~~~i~H~dlkp~Nill~~~~~~  149 (260)
                      +|.+   +-....  -.+|+||....-      .-.++...+..+-.+++.-+.-|- ..+++|.||+--|+|+. +|.+
T Consensus       227 GIP~PePIlLk~h--VLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-dG~l  303 (520)
T KOG2270|consen  227 GIPCPEPILLKNH--VLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-DGKL  303 (520)
T ss_pred             CCCCCCceeeecc--eEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-CCEE
Confidence            6651   111111  226667653221      234677778888888888777765 56999999999999987 6899


Q ss_pred             EEEeeccccc
Q psy7935         150 VMIDFGLSQI  159 (260)
Q Consensus       150 kl~DFg~~~~  159 (260)
                      +|+|.+-+..
T Consensus       304 yiIDVSQSVE  313 (520)
T KOG2270|consen  304 YIIDVSQSVE  313 (520)
T ss_pred             EEEEcccccc
Confidence            9999886643

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.60  E-value=0.00053  Score=56.80  Aligned_cols=34  Identities=29%  Similarity=0.487  Sum_probs=28.9

Q ss_pred             CceecCCCCCcEEEccC----CcEEEEeeccccccccc
Q psy7935         130 NIIHGDLTTSNMILSSD----HHLVMIDFGLSQIKVST  163 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~----~~~kl~DFg~~~~~~~~  163 (260)
                      .++|+|+.|.|||++.+    +.++++||..+......
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~  217 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRG  217 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcH
Confidence            58999999999999974    88999999988754443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1235|consensus

Probab=97.59  E-value=0.00032  Score=61.89  Aligned_cols=134  Identities=16%  Similarity=0.224  Sum_probs=77.0

Q ss_pred             eeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHH------------------------------HHHHHHHHH
Q psy7935          22 ECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEAL------------------------------TKERITSEI   70 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~------------------------------~~~~~~~e~   70 (260)
                      +.||.-+.|.||+|+.. |+.||||+=.+ ........+-.                              ..-.|.+|+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P-~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHP-GLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCc-ChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            68899999999999984 88899997221 11111000000                              011344455


Q ss_pred             hhhccc----CCCC------eE---EeCCCchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHH-HHHhhhC
Q psy7935          71 RGLMKC----RMAD------IC---LDDVQKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTT-LSVMHSN  129 (260)
Q Consensus        71 ~~l~~~----~h~~------i~---~~~~~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~-l~~LH~~  129 (260)
                      +...++    .|-+      |+   +.-.....+  +|||+.+..+       ....+...   ++..+.++ ++-|-..
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVL--tME~~~G~~i~Dl~~i~~~gi~~~~---i~~~l~~~~~~qIf~~  320 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVL--TMEYVDGIKINDLDAIDKRGISPHD---ILNKLVEAYLEQIFKT  320 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcceEE--EEEecCCccCCCHHHHHHcCCCHHH---HHHHHHHHHHHHHHhc
Confidence            444433    2333      11   111122223  5666666543       11133332   33444444 3334567


Q ss_pred             CceecCCCCCcEEEc----cCCcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMILS----SDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill~----~~~~~kl~DFg~~~~~~  161 (260)
                      |++|+|-.|-||++.    .++.+.+-|||+.....
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            899999999999999    37899999999986553

>PLN02876 acyl-CoA dehydrogenase

Probab=97.55  E-value=0.00069  Score=63.90  Aligned_cols=54  Identities=17%  Similarity=0.230  Sum_probs=35.8

Q ss_pred             ceeeccCCceeEEEEEEcC----ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCe
Q psy7935          21 AECFKQGAEGRIFKTEYLG----RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADI   81 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i   81 (260)
                      ++.++.|.++.+|+....+    ..+++|+..... .   ..   ....+.+|+.+++.+. |.++
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~-~---~~---~~~~~~rE~~~l~~L~~~~~v  101 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGK-L---LQ---SAHAVEREYQVLRALGEHTDV  101 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCc-c---Cc---cHHHHHHHHHHHHHHhhcCCC
Confidence            6889999999999988753    467888632211 0   10   1235778888888874 5555

>PRK05231 homoserine kinase; Provisional

Probab=97.52  E-value=0.00054  Score=57.25  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=27.1

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+++|+|+.|.|||++.+...-|+||+.+..-
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACND  218 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence            37999999999999997665689999987543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.47  E-value=0.0013  Score=50.79  Aligned_cols=129  Identities=16%  Similarity=0.183  Sum_probs=74.2

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCc-h-------hhHHHHHHHHHHHHhhhcccC------CCCeE-Ee
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHP-K-------LDEALTKERITSEIRGLMKCR------MADIC-LD   84 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~-~-------~~~~~~~~~~~~e~~~l~~~~------h~~i~-~~   84 (260)
                      ....||+|+.-.||.--+ +....||+..+...... .       ........+..+|+..+..+.      +.+|. ++
T Consensus         5 ~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             CCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            357899999988887543 44466898654440000 0       000011345667777666665      33443 33


Q ss_pred             CCC-----------------chhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--
Q psy7935          85 DVQ-----------------KSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--  145 (260)
Q Consensus        85 ~~~-----------------~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--  145 (260)
                      +..                 +...-+|.+++....    +++ .+.   ..+-+-.++|-++.|+.+|++|.||++..  
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence            321                 111256666664443    333 222   22333456788899999999999999986  


Q ss_pred             -CC-cEEEEe-eccc
Q psy7935         146 -DH-HLVMID-FGLS  157 (260)
Q Consensus       146 -~~-~~kl~D-Fg~~  157 (260)
                       +. .+.|+| ||..
T Consensus       156 ~~~~~lvlIDG~G~~  170 (199)
T PF10707_consen  156 SGEFRLVLIDGLGEK  170 (199)
T ss_pred             CCceEEEEEeCCCCc
Confidence             22 688888 4543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.35  E-value=0.0012  Score=56.54  Aligned_cols=30  Identities=23%  Similarity=0.485  Sum_probs=25.6

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ..++|||+.|.|||+..+ .++++||.++..
T Consensus       223 ~~l~HgDl~~gni~~~~~-~~~viD~E~a~~  252 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE-ETKVIDPEFAFY  252 (401)
T ss_pred             CceeeccCCcccEEeeCC-CcEEEecccccc
Confidence            469999999999999865 699999987653

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.19  E-value=0.0025  Score=53.69  Aligned_cols=31  Identities=23%  Similarity=0.439  Sum_probs=25.6

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      +.++|||+.|.|||++.+ .++++|+..+..-
T Consensus       192 ~~llHGDl~~gNi~~~~~-~~~~iD~e~~~~G  222 (370)
T TIGR01767       192 ETLLHGDLHSGSIFVSEH-ETKVIDPEFAFYG  222 (370)
T ss_pred             ceeeeccCCcccEEEcCC-CCEEEcCcccccC
Confidence            468999999999999865 5789999877543

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.05  E-value=0.0034  Score=52.76  Aligned_cols=34  Identities=26%  Similarity=0.455  Sum_probs=28.2

Q ss_pred             ceecCCCCCcEEEcc-CCcEEEEeecccccccccc
Q psy7935         131 IIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus       131 i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~~  164 (260)
                      +.|+|+.+.|||++. ++.++++||..|.......
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~f  218 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGY  218 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCCCccHH
Confidence            799999999999975 5789999999886554433

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=97.01  E-value=0.011  Score=48.17  Aligned_cols=48  Identities=21%  Similarity=0.331  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHhhhC--CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         115 LSIEIGTTLSVMHSN--NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       115 i~~~i~~~l~~LH~~--~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+..+-.++.-.+..  -++|+|+.|.|+|.+..+.++|+||.-|...+.
T Consensus       137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D~  186 (269)
T COG0510         137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLNDP  186 (269)
T ss_pred             HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCCccH
Confidence            334444444444433  589999999999999889999999998865443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.91  E-value=0.0017  Score=49.84  Aligned_cols=93  Identities=11%  Similarity=0.042  Sum_probs=64.8

Q ss_pred             HHHHhhhcccCC-CCeE-EeCCCchhhhhHHHhhccCcc---------cccchHHHHHHHHHHHHHHHHHhhh---CCce
Q psy7935          67 TSEIRGLMKCRM-ADIC-LDDVQKSAIQTLISNLDSQNI---------TRENISDIIKLLSIEIGTTLSVMHS---NNII  132 (260)
Q Consensus        67 ~~e~~~l~~~~h-~~i~-~~~~~~~~~~~l~~~l~~~~~---------~~~~~~~~~~~i~~~i~~~l~~LH~---~~i~  132 (260)
                      .+|.-+++.+++ ++++ +++..+..+  +.|++.....         ....++....+++.++++.+.++++   ..+.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~~~--v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~   84 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGRFY--VVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY   84 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCCEE--EEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence            346666777765 3444 555444333  2333322100         1136778888899999999999998   3588


Q ss_pred             ecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         133 HGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       133 H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      -.|++|+|+.+++++.+|++|........
T Consensus        85 lcDv~~~nfgv~~~~~lk~iDld~v~~~~  113 (188)
T PF12260_consen   85 LCDVSPDNFGVNDDGRLKLIDLDDVFVED  113 (188)
T ss_pred             EeecchHHeEEeCCCcEEEEechhcchhH
Confidence            89999999999999999999998765543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK12396 5-methylribose kinase; Reviewed

Probab=96.89  E-value=0.01  Score=50.70  Aligned_cols=54  Identities=22%  Similarity=0.114  Sum_probs=35.6

Q ss_pred             ceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          21 AECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      .+.||.|.-+.||++.+.  ++.|+||.-.+. .+. .-.......+...|.+.|+..
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~-vRv-~~swpL~~~R~~~E~~aL~~~   89 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDT-ARI-SDEFKLSTNRIRIESDVLQLE   89 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHh-hcc-CCCCCCChHHHHHHHHHHHHH
Confidence            678999999999999985  678999984332 221 111122345566677777655

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.80  E-value=0.0096  Score=48.71  Aligned_cols=31  Identities=23%  Similarity=0.548  Sum_probs=25.7

Q ss_pred             CceecCCCCCcEEEccCCc-EEEEeecccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHH-LVMIDFGLSQIK  160 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~-~kl~DFg~~~~~  160 (260)
                      .++|+|+.|.|||++.++. .-|+||+.+..-
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            4899999999999997454 569999988654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.65  E-value=0.01  Score=49.31  Aligned_cols=34  Identities=24%  Similarity=0.504  Sum_probs=29.6

Q ss_pred             ceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ++|+|+.+.|++++.++-+=++||+++..-.+..
T Consensus       200 lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~~  233 (321)
T COG3173         200 LVHGDYRPGNLIIDPGRPTGVLDWELATLGDPLE  233 (321)
T ss_pred             eeeCCcccCCEEEeCCCeeEEEeccccccCCcHH
Confidence            6999999999999998889999999987655444

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.53  E-value=0.024  Score=48.69  Aligned_cols=29  Identities=10%  Similarity=0.123  Sum_probs=24.7

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEee
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERF   48 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~   48 (260)
                      ..+.+|.|..+.||+....++.++||+-.
T Consensus        36 ~~~eiggGn~N~VyrV~~~~~svVVKqa~   64 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSSGSFVIKQAL   64 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCCccEEEEeCC
Confidence            36789999999999999877789999843

>PRK10593 hypothetical protein; Provisional

Probab=96.51  E-value=0.044  Score=45.35  Aligned_cols=49  Identities=10%  Similarity=0.061  Sum_probs=33.1

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      ....+.||.|..+.||+....+..+++|.. .. ...        ...+.+|.+.++.+
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~-~~-~~~--------~~~~~~Ea~~L~~L   64 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGNPMPLMA-RS-FST--------PGVAQQEAWKLSML   64 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCCEEEEEe-cc-ccc--------chHHHHHHHHHHHH
Confidence            344678999999999999876667888863 21 111        13466777766655

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.89  E-value=0.022  Score=47.36  Aligned_cols=30  Identities=27%  Similarity=0.515  Sum_probs=26.0

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .+++|+|+.+.|++++. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            47899999999999997 6789999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PTZ00384 choline kinase; Provisional

Probab=95.84  E-value=0.046  Score=46.90  Aligned_cols=32  Identities=22%  Similarity=0.333  Sum_probs=26.1

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ....|.|+-+.|||.+. ..++++||.-|....
T Consensus       227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA~~n~  258 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFN-QGIYFIDFDFAGFNY  258 (383)
T ss_pred             eeeeeccCCcccEEecC-CCEEEEEeccccCCc
Confidence            35799999999999764 569999998876443

>PLN02236 choline kinase

Probab=95.76  E-value=0.038  Score=46.75  Aligned_cols=35  Identities=17%  Similarity=0.389  Sum_probs=29.1

Q ss_pred             CCceecCCCCCcEEEcc-CCcEEEEeeccccccccc
Q psy7935         129 NNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVST  163 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~  163 (260)
                      ..++|+|+++.|||++. ++.+.++||..+......
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~  235 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVA  235 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchH
Confidence            36899999999999986 478999999988755443

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.33  E-value=0.016  Score=44.27  Aligned_cols=31  Identities=23%  Similarity=0.307  Sum_probs=26.2

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+|+|+.|.|++++.++ ++++||+.+....
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gD  108 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGD  108 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCC
Confidence            469999999999998776 8999999886443

>PTZ00296 choline kinase; Provisional

Probab=95.13  E-value=0.093  Score=45.94  Aligned_cols=32  Identities=31%  Similarity=0.433  Sum_probs=26.1

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+.|.|+.+.|||.+.+ .++++||..|.....
T Consensus       285 VfCHNDl~~~NiL~~~~-~l~LIDfEYAg~ndp  316 (442)
T PTZ00296        285 VFCHNDLQENNIINTNK-CLRLIDFEYSGYNFL  316 (442)
T ss_pred             eEEeCCCCccceeecCC-CEEEEeecccccccH
Confidence            48999999999998754 599999998865433

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.03  E-value=0.031  Score=45.99  Aligned_cols=48  Identities=19%  Similarity=0.249  Sum_probs=30.3

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      .+..+.++.|..+.+|+....++.+.||+-. ..          ....|..|.+-|+.+
T Consensus        19 i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~-~~----------~~~~f~~Ea~gL~~L   66 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLDTDGGSYFVKVNS-ES----------GRDMFEGEAEGLKAL   66 (288)
T ss_dssp             --EEEEE--SSSSEEEEEETTS-EEEEEEEE-GG----------GCCHHHHHHHHHHHH
T ss_pred             eeeeEecCCCChhheEEEECCCccEEEEecC-hh----------hHHHHHHHHHHHHHH
Confidence            4456789999999999999778999999733 11          123456666666655

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.98  E-value=0.12  Score=43.79  Aligned_cols=55  Identities=22%  Similarity=0.340  Sum_probs=42.5

Q ss_pred             chHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         107 NISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       107 ~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      -..++...++.+.+..+.-+-.+ ..-|||+.-.||||+ .|.+.|+||-+++...+
T Consensus       318 ~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~  373 (488)
T COG5072         318 DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYS  373 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecccC
Confidence            34566666777766655555544 689999999999999 89999999999985433

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.80  E-value=0.063  Score=41.51  Aligned_cols=31  Identities=39%  Similarity=0.662  Sum_probs=26.2

Q ss_pred             CCceecCCCCCcEEEccCC-----cEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDH-----HLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~-----~~kl~DFg~~~~  159 (260)
                      ..++|||+.+.|+|+..++     .+.++||..+..
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            4689999999999998643     689999998754

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.60  E-value=0.064  Score=44.99  Aligned_cols=28  Identities=39%  Similarity=0.611  Sum_probs=25.2

Q ss_pred             ceecCCCCCcEEEccCC-cEEEEeecccc
Q psy7935         131 IIHGDLTTSNMILSSDH-HLVMIDFGLSQ  158 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~-~~kl~DFg~~~  158 (260)
                      ++|+|+.|.||+++.+. .+-++||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            99999999999999876 49999999774

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=94.57  E-value=0.061  Score=44.73  Aligned_cols=33  Identities=18%  Similarity=0.369  Sum_probs=29.0

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      +++|+|+.+.|+|++.++.+.++||..+..-..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASFASP  229 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCc
Confidence            799999999999999988999999998765433

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.54  E-value=0.058  Score=42.12  Aligned_cols=32  Identities=25%  Similarity=0.475  Sum_probs=22.6

Q ss_pred             CceecCCCCCcEEE-ccCCcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMIL-SSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill-~~~~~~kl~DFg~~~~~~  161 (260)
                      .+.|+|+.|.|||+ +.++.++++||..|....
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~  176 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGYND  176 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EEEE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhhcc
Confidence            58999999999999 778999999999886544

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.20  E-value=0.06  Score=44.99  Aligned_cols=52  Identities=21%  Similarity=0.386  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHHHHhhh----CCceecCCCCCcEEEccC------------------CcEEEEeeccccccc
Q psy7935         110 DIIKLLSIEIGTTLSVMHS----NNIIHGDLTTSNMILSSD------------------HHLVMIDFGLSQIKV  161 (260)
Q Consensus       110 ~~~~~i~~~i~~~l~~LH~----~~i~H~dlkp~Nill~~~------------------~~~kl~DFg~~~~~~  161 (260)
                      ..++.+..|++--.--+-+    .+.+|-||||+|||+-..                  -.++|-||.+|+..+
T Consensus       275 ~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  275 EYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             HHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence            4445566666543211222    369999999999999652                  356777888776544

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=93.87  E-value=0.056  Score=42.47  Aligned_cols=83  Identities=18%  Similarity=0.171  Sum_probs=50.4

Q ss_pred             HHHHHHhhhcccCCCCeE-EeCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh--CCceecCCCCCcE
Q psy7935          65 RITSEIRGLMKCRMADIC-LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS--NNIIHGDLTTSNM  141 (260)
Q Consensus        65 ~~~~e~~~l~~~~h~~i~-~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~--~~i~H~dlkp~Ni  141 (260)
                      -+.++..++.++.  +|+ +...+..-.|...|++..-.   .++...+.   . -+.+|.-.|+  .+.+|+|-.|+||
T Consensus       104 ~y~nky~v~Armh--GilrL~NDn~~~yGvIlE~Cy~~~---i~~~N~i~---a-gi~~L~~fH~~~~~~lHGD~np~Ni  174 (308)
T PF07387_consen  104 LYFNKYRVFARMH--GILRLKNDNNYKYGVILERCYKIK---INFSNFIT---A-GIKDLMDFHSENQHCLHGDCNPDNI  174 (308)
T ss_pred             hhhhhhhHHHHhh--heeEeecCCCceeEEEEeeccCcc---cchhHHHH---H-hHHHHHHhhccCCCeecCCCChhhe
Confidence            3556666666652  344 33333333444555554322   22222111   1 1455666783  4799999999999


Q ss_pred             EEccCCcEEEEeecc
Q psy7935         142 ILSSDHHLVMIDFGL  156 (260)
Q Consensus       142 ll~~~~~~kl~DFg~  156 (260)
                      |-|..|.+||.|=+.
T Consensus       175 M~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  175 MCDKFGYLKLVDPVC  189 (308)
T ss_pred             eecCCCCEEecChhh
Confidence            999999999999764

The function of this family is unknown.

>KOG1035|consensus

Probab=93.69  E-value=0.11  Score=50.04  Aligned_cols=147  Identities=16%  Similarity=0.140  Sum_probs=85.2

Q ss_pred             HHHHHHHhhhcccCCCCeE---EeCCCchhh----hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCC
Q psy7935          64 ERITSEIRGLMKCRMADIC---LDDVQKSAI----QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNN  130 (260)
Q Consensus        64 ~~~~~e~~~l~~~~h~~i~---~~~~~~~~~----~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~  130 (260)
                      .....|++.+.+..|+|+.   .+.....+.    .-+.+++.....      ....+....+.+..+...|+.++|++.
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~  306 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLS  306 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence            3445577788888999998   333332222    333344433222      224677888889999999999999996


Q ss_pred             ceecCCCCC---cEEEccCCcEEEE--eecccccccccccccccccccccceeeeeeeeeecCccccccccccceeEeec
Q psy7935         131 IIHGDLTTS---NMILSSDHHLVMI--DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFG  205 (260)
Q Consensus       131 i~H~dlkp~---Nill~~~~~~kl~--DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g  205 (260)
                      ..|.-+..+   +--.+..+.+.++  ||+.++.........++.......       ++.-............|+|.+|
T Consensus       307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~-------~~e~~~~~~~~~~r~~dL~~lg  379 (1351)
T KOG1035|consen  307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRN-------ADEDLKENTAKKSRLTDLWCLG  379 (1351)
T ss_pred             cceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccc-------cccccccccchhhhhhHHHHHH
Confidence            666655555   4444556777777  888877665544332222111111       0111111112233346899999


Q ss_pred             ceeeeecccccc
Q psy7935         206 LSQIKVSTEDKA  217 (260)
Q Consensus       206 ~~~~~~~~~~~~  217 (260)
                      .....+..+..+
T Consensus       380 ll~~~~~~~~~i  391 (1351)
T KOG1035|consen  380 LLLLQLSQGEDI  391 (1351)
T ss_pred             HHHhhhhhcCcc
Confidence            888777766433

>KOG0576|consensus

Probab=93.62  E-value=0.031  Score=50.25  Aligned_cols=164  Identities=14%  Similarity=0.040  Sum_probs=99.5

Q ss_pred             cCcceeeccCCceeEEEEEEcC-ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE---EeCC-Cchhhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLG-RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC---LDDV-QKSAIQ   92 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~---~~~~-~~~~~~   92 (260)
                      +...+-.+.++++.+++.+.+. +....+.+     ..+        ....-+++.|.+++|||-.   +.+. .+.+..
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~h~fv-----s~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~  310 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFV-----SQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLW  310 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhheeceee-----ccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccc
Confidence            4445677889999999987652 23333331     111        2334568999999999933   3332 233445


Q ss_pred             hHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          93 TLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        93 ~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ..+++....+.        .-.+.+.+...+.+.-+.+++++|+---+|+|    ||+..+ +..+..||+....++...
T Consensus       311 i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~  385 (829)
T KOG0576|consen  311 IPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM  385 (829)
T ss_pred             hhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc
Confidence            66666655421        11244455555667778889999998778998    777765 788999999876554432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeee
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIK  210 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~  210 (260)
                      ...           +..+...+.+++..  ..+....|.|+++.-..+
T Consensus       386 ~~~-----------t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~  422 (829)
T KOG0576|consen  386 KPR-----------TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQ  422 (829)
T ss_pred             ccc-----------cCCCCCCCCCchhhcccccccCCCccCCCcchhh
Confidence            111           12222333344423  556777788888764333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	260
2vwb_A	535	Structure Of The Archaeal Kae1-Bud32 Fusion Protein		4e-19
3enh_A	540	Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length		4e-19
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-07
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		8e-05
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		1e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		1e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-04
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		2e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		3e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-04
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-04
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		5e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		6e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		6e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		6e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		9e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		9e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		9e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		9e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		9e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		9e-04

>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex Involved In Transcription And Telomere Homeostasis. Length = 535

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 20  PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR-------- 71
           P     +GAE  I +  YL   V++KER  K YR  +LDE + K R   E R        
Sbjct: 335 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF 394
Query: 72  GLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNI 131
           G+    + D+ LD+  K  + + I+   ++++  +N+      ++ +IG  +  +H N++
Sbjct: 395 GIPAPYIFDVDLDN--KRIMMSYINGKLAKDVIEDNLD-----IAYKIGEIVGKLHKNDV 447
Query: 132 IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
           IH DLTTSN I   D  L +IDFGL +I    EDKAVDL V K+
Sbjct: 448 IHNDLTTSNFIFDKD--LYIIDFGLGKISNLDEDKAVDLIVFKK 489

>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX Length = 540

Iteration: 1
 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 17/164 (10%)
Query: 20  PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIR-------- 71
           P     +GAE  I +  YL   V++KER  K YR  +LDE + K R   E R        
Sbjct: 340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF 399
Query: 72  GLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNI 131
           G+    + D+ LD+  K  + + I+   ++++  +N+      ++ +IG  +  +H N++
Sbjct: 400 GIPAPYIFDVDLDN--KRIMMSYINGKLAKDVIEDNLD-----IAYKIGEIVGKLHKNDV 452
Query: 132 IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKR 175
           IH DLTTSN I   D  L +IDFGL +I    EDKAVDL V K+
Sbjct: 453 IHNDLTTSNFIFDKD--LYIIDFGLGKISNLDEDKAVDLIVFKK 494

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 5   SKKFKITEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKE--RFSKKYRHPKLDE- 59
           S   +I   SD++    E   +G  G+  K  +   G  +++KE  RF ++ +   L E 
Sbjct: 1   SMPHRIFRPSDLIH--GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEV 58
Query: 60  ----ALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLL 115
                L    +   I  L K +  +   + ++   ++ +I ++DSQ    + +S      
Sbjct: 59  KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS-----F 113
Query: 116 SIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLK- 174
           + +I + ++ +HS NIIH DL + N ++  + ++V+ DFGL+++ V  + +   L  LK 
Sbjct: 114 AKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 175 ---RNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGL 206
              +   T++   Y W    +   +SY+  + +  FG+
Sbjct: 174 PDRKKRYTVVGNPY-WMAPEMINGRSYDEKVDVFSFGI 210

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           +  + EI + L  +HS NI++ DL   N++L S  H+V+ DFGL
Sbjct: 142 RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR-ENI 108
           + YR  +L + L  E +     GL+        ++D  +  + T +   D  NI + + +
Sbjct: 73  RTYRELRLLKHLKHENVI----GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL 128
Query: 109 SDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           SD  ++ L  ++   L  +HS  IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR-ENI 108
           + YR  +L + L  E +     GL+        ++D  +  + T +   D  NI + + +
Sbjct: 73  RTYRELRLLKHLKHENVI----GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQAL 128
Query: 109 SDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           SD  ++ L  ++   L  +HS  IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 112 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 164

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 113 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 165

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 111 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 163

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 110 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 162

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR-ENI 108
           + YR  +L + L  E +     GL+        ++D  +  + T +   D  NI + + +
Sbjct: 65  RTYRELRLLKHLKHENVI----GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQAL 120
Query: 109 SDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           SD  ++ L  ++   L  +HS  IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 121 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 188

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 140 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 192

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 185

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 185

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 117 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 169

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 185

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 136 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 188

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 133 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 185

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 184

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 132 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 184

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 138 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 190

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +  + EI + L  +H   IIH DL   N++L+ D H+ + DFG +++ +S E K
Sbjct: 135 RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESK 187

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +K    E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +K    E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 184

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +K    E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 82  CLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNM 141
           CLD      + + I +   Q  T    S+I+K     IG  +  +HS NI H D+   N+
Sbjct: 96  CLDG---GELFSRIQDRGDQAFTEREASEIMK----SIGEAIQYLHSINIAHRDVKPENL 148
Query: 142 ILSSDHH---LVMIDFGLSQIKVSTE-DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNH 197
           + +S      L + DFG ++     + DK+ D++    +L  I+ +  C   G    Y++
Sbjct: 149 LYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMW----SLGVIMYILLC---GYPPFYSN 201
Query: 198 HLVMIDFGL 206
           H + I  G+
Sbjct: 202 HGLAISPGM 210

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITREN-- 107
           + YR  +L + +  E +     GL+        L++     + T +   D  NI +    
Sbjct: 67  RTYRELRLLKHMKHENVI----GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKL 122
Query: 108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
             D ++ L  +I   L  +HS +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 123 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 173

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 27  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 82
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 83  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 142
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 143 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 173

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 26  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 81
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 82  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 172

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +K    E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKA 187

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 28  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 83
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 84  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 143
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 144 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 174

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 29  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 84
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 85  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 144
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 145 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 175

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 27  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 82
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 83  LLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 142
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 143 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 173

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 30  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 85
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 86  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 145
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 146 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 176

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 33  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 88
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +  +Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 89  LLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 148
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 149 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 179

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 72  GLMKCRMADICLDDVQKSAIQTLISNLDSQNITR--ENISDIIKLLSIEIGTTLSVMHSN 129
           GL+        L++     + T +   D  NI +  +   D ++ L  +I   L  +HS 
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 173
Query: 130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
           +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLAR 202

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR--EN 107
           + YR  +L + +  E +     GL+        L++     + T +   D  NI +  + 
Sbjct: 72  RTYRELRLLKHMKHENVI----GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
             D ++ L  +I   L  +HS +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 26  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 81
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +   Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 82  LLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 172

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR--EN 107
           + YR  +L + +  E +     GL+        L++     + T +   D  NI +  + 
Sbjct: 72  RTYRELRLLKHMKHENVI----GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 127
Query: 108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
             D ++ L  +I   L  +HS +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 128 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 91  IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV 150
           + T +  +    +  E I D++     ++   L  +HS+ ++H DL   N++++S   + 
Sbjct: 105 LTTYLDKVPEPGVPTETIKDMM----FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 160
Query: 151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY 185
           + DFGL++I           Y  +  LT+++V  +
Sbjct: 161 LADFGLARI-----------YSFQMALTSVVVTLW 184

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 26  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 81
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +   Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 82  LLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 141
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 142 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 172

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 17/152 (11%)
Query: 27  GAEGRIFKTEYLGRSVLVK---------ERFSKKYRHPKLDEALTKERITSEIRGLMKCR 77
           GA G ++K  ++     VK         E  S K     LDEA     + + +     CR
Sbjct: 36  GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY----VMASVDNPHVCR 91
Query: 78  MADICLDDVQKSAIQTLISN--LDSQNITRENI-SDIIKLLSIEIGTTLSVMHSNNIIHG 134
           +  ICL    +   Q +     LD     ++NI S  +    ++I   ++ +    ++H 
Sbjct: 92  LLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHR 151
Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N+++ +  H+ + DFGL+++ +  E+K
Sbjct: 152 DLAARNVLVKTPQHVKITDFGLAKL-LGAEEK 182

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITR--EN 107
           + YR  +L + +  E +     GL+        L++     + T +   D  NI +  + 
Sbjct: 78  RTYRELRLLKHMKHENVI----GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKL 133
Query: 108 ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ 158
             D ++ L  +I   L  +HS +IIH DL  SN+ ++ D  L ++DFGL++
Sbjct: 134 TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 184

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	260
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	2e-38
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	9e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-06
2a19_B	284	Interferon-induced, double-stranded RNA-activated	3e-06
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-06
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-05
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-05
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-05
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-05
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	6e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	7e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	7e-05
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	7e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	7e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	7e-05
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	9e-05
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	9e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	9e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-04
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-04
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-04
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	4e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	5e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-04
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	5e-04
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-04
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	5e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	6e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	6e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	6e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-04
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	8e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-04

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score =  139 bits (353), Expect = 2e-38
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 43/238 (18%)

Query: 20  PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA 79
           P     +GAE  I +  YL   V++KER  K YR  +LDE + K R   E R L   +  
Sbjct: 340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDF 399

Query: 80  DIC---LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL 136
            I    + DV     + ++S ++ +   ++ I D + +   +IG  +  +H N++IH DL
Sbjct: 400 GIPAPYIFDVDLDNKRIMMSYINGKLA-KDVIEDNLDIAY-KIGEIVGKLHKNDVIHNDL 457

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYN 196
           TTSN I   D  L +IDFGL +I    EDKAVDL V K+ +                   
Sbjct: 458 TTSNFIFDKD--LYIIDFGLGKISNLDEDKAVDLIVFKKAV------------------- 496

Query: 197 HHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR 254
                         +ST  +   F +++   L  Y +    ++E +++   +VE R R
Sbjct: 497 --------------LSTHHE--KFDEIWERFLEGY-KSVYDRWEIILELMKDVERRAR 537

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.2 bits (119), Expect = 3e-07
 Identities = 41/282 (14%), Positives = 89/282 (31%), Gaps = 67/282 (23%)

Query: 3   HISKKFKITEASDMV--LQPAE-CFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDE 59
           ++S+     +    +  L+PA+     G  G        G++ +  +             
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVLG-------SGKTWVALD------------- 169

Query: 60  ALTKERITSEIRG------LMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIK 113
                ++  ++        L  C   +  L+      +Q L+  +D    +R + S  IK
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLE-----MLQKLLYQIDPNWTSRSDHSSNIK 224

Query: 114 LLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-----HLVMIDFGLSQIKVSTEDKAV 168
           L    I   L  +    +         ++L   +          +    +I ++T  K V
Sbjct: 225 LRIHSIQAELRRL----LKSKPYENCLLVL--LNVQNAKAWNAFNLS-CKILLTTRFKQV 277

Query: 169 DLYVLKRNLTTIIVVAYCW------SKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD--- 219
             ++     T I +  +         K  L  Y   L      L +  ++T  + +    
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY---LDCRPQDLPREVLTTNPRRLSIIA 334

Query: 220 --FRDMFN-WILSSYRRQNRKQFETVMKTFAEV----ELRGR 254
              RD    W   +++  N  +  T++++   V    E R  
Sbjct: 335 ESIRDGLATW--DNWKHVNCDKLTTIIESSLNVLEPAEYRKM 374

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 3e-04
 Identities = 44/324 (13%), Positives = 93/324 (28%), Gaps = 108/324 (33%)

Query: 11  TEASDM---------VLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEAL 61
            E  +          V + A  F    + +    + + +S+L KE         ++D  +
Sbjct: 9   FETGEHQYQYKDILSVFEDA--FVDNFDCK--DVQDMPKSILSKE---------EIDHII 55

Query: 62  TKERITSEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQN-----------------IT 104
             +   S    L         L   Q+  +Q  +  +   N                 +T
Sbjct: 56  MSKDAVSGTLRLF------WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMT 109

Query: 105 RENISDIIKLLS----------------IEIGTTLSVMHSNN--IIHGDL-----TTSNM 141
           R  I    +L +                +++   L  +      +I G L       +  
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169

Query: 142 ILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYC--------------W 187
           +  S      +DF +  + +   +    +  + + L   I   +                
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 188 SKGTL------QSYNHHLVMID----------FGLS-QIKVSTEDKAV-DFRDMFNWILS 229
            +  L      + Y + L+++           F LS +I ++T  K V DF       LS
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF-------LS 282

Query: 230 SYRRQNRKQFETVMKTFAEVELRG 253
           +    +    +    T    E++ 
Sbjct: 283 AATTTHISL-DHHSMTLTPDEVKS 305

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 48.9 bits (116), Expect = 6e-07
 Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 92  QTLISNLDSQNITRENISDIIKL-LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV 150
           QT    L S + T +++    +L L++++   L+ +H   ++H  L   +++L     + 
Sbjct: 187 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVF 246

Query: 151 MIDFGLS 157
           +  F   
Sbjct: 247 LTGFEHL 253

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 48.5 bits (115), Expect = 9e-07
 Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 92  QTLISNLDSQNITRENISDIIKL-LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV 150
           QT    L S + T +++    +L L++++   L+ +H   ++H  L   +++L     + 
Sbjct: 192 QTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVF 251

Query: 151 MIDFGLSQ 158
           +  F    
Sbjct: 252 LTGFEHLV 259

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 47.7 bits (113), Expect = 1e-06
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 92  QTLISNLDSQNITRENISDIIKL-LSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV 150
           + L S LD   + R +   +    L+ ++    + + S  ++HG  T  N+ +  D  L+
Sbjct: 175 ELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLM 234

Query: 151 MIDFGLS 157
           + D    
Sbjct: 235 LGDVSAL 241

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)

Query: 127 HSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLK---RNLTTIIVV 183
           HS NIIH DL + N ++  + ++V+ DFGL+++ V  + +   L  LK   R     +V 
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184

Query: 184 AYCW 187
              W
Sbjct: 185 NPYW 188

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 16/76 (21%), Positives = 34/76 (44%)

Query: 92  QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM 151
           + L   ++ +    +    +   + I+I   +  +HS  ++H DL  SN+  + D  + +
Sbjct: 146 ENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV 205

Query: 152 IDFGLSQIKVSTEDKA 167
            DFGL       E++ 
Sbjct: 206 GDFGLVTAMDQDEEEQ 221

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 92  QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM 151
           +  I     + + +    ++      +I   +  +HS  +I+ DL  SN+ L     + +
Sbjct: 108 EQWIEKRRGEKLDKVLALELF----EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI 163

Query: 152 IDFGLSQIKVSTEDKA 167
            DFGL     +   + 
Sbjct: 164 GDFGLVTSLKNDGKRT 179

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 14/45 (31%), Positives = 27/45 (60%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           L  +H   I+H D+ + N+ L+ D  + + DFG++++  ST + A
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 14/41 (34%), Positives = 24/41 (58%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +H+ +IIH DL ++N+ L  D+ + + DFGL+  K      
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 16/75 (21%), Positives = 33/75 (44%)

Query: 93  TLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI 152
            L   ++ +    E    +   + ++I   +  +HS  ++H DL  SN+  + D  + + 
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG 160

Query: 153 DFGLSQIKVSTEDKA 167
           DFGL       E++ 
Sbjct: 161 DFGLVTAMDQDEEEQ 175

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 127 HSNNIIHGDLTTSNMILSSDHHLVMI-DFGLSQIKVSTE 164
           H+  I+H DL + N+    D+  V+I DFGL  I    +
Sbjct: 147 HAKGILHKDLKSKNVFY--DNGKVVITDFGLFSISGVLQ 183

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 127 HSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           H   IIH D+  SN+++  D H+ + DFG+S  
Sbjct: 154 HYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI + L  +HS ++++ D+   N++L  D H+ + DFGL +  +S     
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM 162

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA----VDLYVLKRNLTTII 181
           +HS  IIH DL   N+ +    ++ + DFGL++    + D       +L     NLT+ I
Sbjct: 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI 191

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 11/59 (18%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----------DHHLVMIDFGLS 157
            ++   ++ +   +  +H   IIHGD+   N IL +              L +ID G S
Sbjct: 172 GLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQS 230

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL--YVLKR 175
           L  +HS N++H DL  SN++L++   L + DFGL+++     D    L  YV  R
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 17/50 (34%), Positives = 28/50 (56%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI + L  +H   IIH DL   N++L+ D H+ + DFG +++      +A
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 187

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADI-CLDDVQKSAIQT-------LISNL--- 98
           KK   P   E   K R   E+  L   +  ++  L DV   A          L+      
Sbjct: 55  KKLSRPFQSEIFAK-RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 113

Query: 99  DSQNITRENISDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           D Q I     S+  I+ L  ++   L  +HS  ++H DL   N+ ++ D  L ++DFGL+
Sbjct: 114 DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 11/57 (19%), Positives = 22/57 (38%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTT 179
           L  +H+    H DL  +N++L  +   V++D G         + +     L+     
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           L  MHS  ++H D+  +N+ +++   + + D GL +   S    A
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 126 MHSNN--IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           +H+ N  I+H +L + N+++   + + + DFGLS++K ST   
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS 195

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMADI-CLDDVQKSAIQT-------LISNL--- 98
           KK   P  ++   K R   E+  +      +I  L +V              ++  L   
Sbjct: 56  KKLSRPFQNQTHAK-RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 114

Query: 99  DSQNITRENISDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +   + +  +    +  L  ++   +  +HS  IIH DL  SN+++ SD  L ++DFGL+
Sbjct: 115 NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 14/50 (28%), Positives = 24/50 (48%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI + L  +H   II+ DL   N++L  + H  + DFG+ +  +      
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  +H   II+ DL   N++L+   H+ + DFGL +  +      
Sbjct: 129 EISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT 178

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 114 LLSIEIGTTLSVMHSNNIIHGDLTTSNMIL--SSDHHLVMIDFGLS 157
            L I +   L  +H N  +HGD+  +N++L   +   + + D+GLS
Sbjct: 155 QLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLS 200

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLT 178
           +H +N+IH DL  SN++++S+  L + DFGL++I   +     +    +  + 
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.5 bits (101), Expect = 7e-05
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           E+   L  +HS  II+ DL   N++L  + H+ + DFGLS+  +  E KA
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA 183

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 18/50 (36%), Positives = 28/50 (56%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI + L  +HS NI++ DL   N++L S  H+V+ DFGL +  +      
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT 196

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 42.0 bits (99), Expect = 9e-05
 Identities = 8/46 (17%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 114 LLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD--HHLVMIDFGLS 157
            ++  +   L  +H N  +HG++T  N+ +  +    + +  +G +
Sbjct: 163 QVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFA 208

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  +HS  I++ DL   N++L  D H+ + DFG+ +  +  + K 
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT 175

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 42.2 bits (100), Expect = 9e-05
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L+ +H   II+ DL   N++L S+ H+ + D+G+ +  +   D  
Sbjct: 118 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 167

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  + S  II+ DL   N++L S+ H+ + DFG+ +  +      
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 499

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
             +     +    L+ +HS  ++H D+  +N+ L       + DFGL  +++ T    
Sbjct: 157 AQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAG 213

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 15/50 (30%), Positives = 25/50 (50%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L  + S  II+ DL   N++L S+ H+ + DFG+ +  +      
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 178

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           +H  NI+H DL   N++L  D ++ + DFG S  
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI   L+ +H   II+ DL   N++L S+ H+ + D+G+ +  +   D  
Sbjct: 161 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT 210

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           L  +HS +IIH DL  SN+ ++ D  L ++DFGL+
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 11/35 (31%), Positives = 22/35 (62%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           L V+H   ++H DL   N++L+ ++ + + DF L+
Sbjct: 147 LHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)

Query: 114 LLSIEIGTTLSVMHSNNIIHGDLTTSNMILS--SDHHLVMIDFGLS 157
            LS+ I   L  +H +  +HGD+  SN++L+  +   + ++D+GL+
Sbjct: 156 QLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI 159
           L  MH ++I+H D+   N++  +     + +IDFGL+  
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK 200

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           EI   +  +H    +H D+   N++L    H+ + DFG  
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC 209

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   LS  HS  +IH D+   N++L S   L + DFG S
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 22/35 (62%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           L  +H+  IIH DL   N+ ++ D  L ++DFGL+
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   L  + +  IIH D+   N++L    H+ + DF ++
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +H N +IH DL   N+ L+ D  + + DFGL+
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 162

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           +H+NNI+H DL   N++L  +  + + DFG S  
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH 249

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   L   H   +IH D+   N+++     L + DFG S
Sbjct: 122 ELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS 161

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 13/32 (40%), Positives = 20/32 (62%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +H N +IH DL   N+ L+ D  + + DFGL+
Sbjct: 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 188

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   L  +HS   IH D+   NM+L    HL + DFG  
Sbjct: 176 EVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 40.6 bits (95), Expect = 3e-04
 Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 15/121 (12%)

Query: 50  KKYRHPKLDEALTKERITSEIRGLMKCRMAD--ICLDDVQKSAIQT-------LISNL-- 98
           KK   P  ++   K R   E+  LMKC      I L +V              L+  L  
Sbjct: 93  KKLSRPFQNQTHAK-RAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD 150

Query: 99  -DSQNITRENISDI-IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
            +   + +  +    +  L  ++   +  +HS  IIH DL  SN+++ SD  L ++DFGL
Sbjct: 151 ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210

Query: 157 S 157
           +
Sbjct: 211 A 211

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 14/48 (29%), Positives = 29/48 (60%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           ++ IK +  ++   L  +HS+ ++H DL   N++++S   + + DFGL
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.5 bits (95), Expect = 3e-04
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   +  +H  + +H D+   N+++  + H+ + DFG  
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSC 222

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 123 LSVMHSNNIIHGDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTEDKAVDL--YVLKR 175
           L  +HS N++H DL  +N+ + + D  L + DFGL++I          L   ++ +
Sbjct: 133 LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 19/49 (38%), Positives = 30/49 (61%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           EI   L  +H   II+ D+   N++L S+ H+V+ DFGLS+  V+ E +
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 13/32 (40%), Positives = 24/32 (75%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +HS  ++H D+  SN++L+++ H+ + DFGLS
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLS 156

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI 159
           L  MH NN +H DL   N++ ++   + L +IDFGL+  
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL 156
           ++ IK L  +    L  +H+N I+H DL   N++++S   + + DFGL
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 123 LSVMHS-----NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           L   H      + ++H DL  +N+ L    ++ + DFGL++I       A
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 14/32 (43%), Positives = 25/32 (78%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +HS+ I+H DLT SN++L+ + ++ + DFGL+
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI 159
           L  +HS+NI H D+   N+I  +     + +I+FG ++ 
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 7/54 (12%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQI 159
           ++I++    +IGT +  +HS+NI H D+   N++ +S   D  L + DFG ++ 
Sbjct: 131 AEIMR----DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.0 bits (94), Expect = 5e-04
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
            H   I+H DL   N++L +D ++ + DFG S  
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNE 163

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 40.1 bits (94), Expect = 5e-04
 Identities = 13/32 (40%), Positives = 21/32 (65%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +H + IIH DL  +N +L+ D  + + DFGL+
Sbjct: 145 IHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 39.8 bits (93), Expect = 5e-04
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +HS  I+H DL  +N +++ D  + + DFGL+
Sbjct: 172 VHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI 159
           +  MH   I+H DL   N++  +     + +IDFGL++ 
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 6/51 (11%), Positives = 15/51 (29%), Gaps = 4/51 (7%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVL 173
               H   +       S + +S D  +V+         +   +   D+  +
Sbjct: 142 ADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT----MPDANPQDDIRGI 188

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           +I  T   +HS ++I+ DL   N+++    ++ + DFG +
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA 188

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 39.4 bits (93), Expect = 6e-04
 Identities = 14/40 (35%), Positives = 24/40 (60%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           E+   L  +HS +II+ DL   N++L  + H+ + DFG +
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 153

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 118 EIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           EI + L  +HS  N+++ DL   N++L  D H+ + DFGL +  +      
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM 306

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 123 LSVMHSNNIIHGDLTTSNMIL-SSDHHLVMIDFGLSQIKVSTED 165
           +  +HS  I H D+   N+++ S D+ L + DFG ++  + +E 
Sbjct: 154 VGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP 197

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH---LVMIDFGLSQIKVSTE 164
           S+I+K     IG  +  +HS NI H D+   N++ +S      L + DFG ++   S  
Sbjct: 164 SEIMK----SIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 39.4 bits (92), Expect = 7e-04
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           +I + L  +H  NII+ DL   N++L  D ++ + D GL+    + + K 
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS 157
           EI   L  +H   I++ DL   N++L    H+ + D GL+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)

Query: 123 LSVMHSNNIIHGDLTTSNMILSS----DHHLVMIDFGLSQI 159
           +  +HS  I H DL   N++L      +  + +IDFG++  
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 5/49 (10%)

Query: 114 LLSIEIGTTLSVMHSNNIIHGDLTTSNMIL-----SSDHHLVMIDFGLS 157
           +++I++ + +  +HS N+I+ D+   N ++      +   + +IDF L+
Sbjct: 109 MIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 7/55 (12%)

Query: 109 SDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQIK 160
           S I++    ++ + +S MH   ++H DL   N++ +    +  + +IDFG +++K
Sbjct: 109 SYIMR----KLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 3/41 (7%)

Query: 122 TLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQI 159
            +  +H +NI+H D+   N++L +     ++ ++DFGLS  
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF 198

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	260
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.98
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.98
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.98
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.98
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.98
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.98
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.98
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.98
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.98
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.98
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.98
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.98
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.98
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.98
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.98
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.98
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.98
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.98
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.98
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.98
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.98
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.98
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.98
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.98
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.98
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.98
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.98
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.98
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.96
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.96
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.9
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.86
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.79
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.13
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.07
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.04
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.78
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.73
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.39
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.31
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.07
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.01
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.94
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.89
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.85
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.84
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.73
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.55
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.33
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.23
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.22
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.96
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.95
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.9
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.39
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.25
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.15
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	94.97
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	94.2
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	94.13
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	93.05
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	92.98
4aoj_A	329	High affinity nerve growth factor receptor; transf	92.85
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	89.87
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	88.1
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	85.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	85.74
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	83.55
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	81.3
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	80.76

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.4e-45  Score=302.23  Aligned_cols=225  Identities=15%  Similarity=0.142  Sum_probs=175.8

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++++.||+|+||.||+|++  +|+.||||++.....     ......+.+.+|++++++++||||+     +.+...
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            4589999999999999999998  489999998754321     1222346799999999999999999     333333


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       |+|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus       107 ~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~  183 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLS  183 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence            333       4555555432   368999999999999999999999999999999999999999999999999998764


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      ......        ...+++++..+++|+.+  ..++.++|+||+|+++++|++|..|+.   ..+++++++.+.   +.
T Consensus       184 ~~~~~~--------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~  255 (311)
T 4aw0_A          184 PESKQA--------RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE  255 (311)
T ss_dssp             TTTTCC--------CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             CCCCcc--------cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence            332111        11233444455566555  568899999999999999999999987   677777777754   33


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++.+|...++..|..
T Consensus       256 ~~s~~~~dli~~lL~~dp~~R~t  278 (311)
T 4aw0_A          256 KFFPKARDLVEKLLVLDATKRLG  278 (311)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSTT
T ss_pred             ccCHHHHHHHHHHccCCHhHCcC
Confidence            44677899999999999999975

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-44  Score=292.57  Aligned_cols=222  Identities=17%  Similarity=0.151  Sum_probs=161.0

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||||++.........     ....+.+|++++++++||||+     +.+...
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSD-----MQGRIEREISYLRLLRHPHIIKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHH-----HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCE
Confidence            4689999999999999999998  4899999997654433222     246799999999999999999     333333


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        88 ~~ivmEy~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EEEEEECCCEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             EEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            222      5566665443   3699999999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--c-cccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q-SYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---R  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~  233 (260)
                      ....           .+..++..+.+|+.+  . +.++++|+||+|++++++++|..|+.   ..++++.+..+..   .
T Consensus       165 ~~~~-----------~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~  233 (275)
T 3hyh_A          165 GNFL-----------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK  233 (275)
T ss_dssp             ---------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             CCcc-----------CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            3211           122333334455544  2 34679999999999999999999987   5666777666543   3


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++.+|...++..|..
T Consensus       234 ~~s~~~~~li~~~L~~dP~~R~s  256 (275)
T 3hyh_A          234 FLSPGAAGLIKRMLIVNPLNRIS  256 (275)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCHHHHHHHHHHccCChhHCcC
Confidence            34577899999999999999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.9e-45  Score=304.98  Aligned_cols=224  Identities=19%  Similarity=0.246  Sum_probs=164.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      ++|++++.||+|+||.||+|++.  |+.||||++......      ....+.+.+|+.++++++||||+ +++    ...
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS------SKEREESRREVAVLANMKHPNIVQYRESFEENGS   97 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC------HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCE
Confidence            56899999999999999999984  899999997654332      11256799999999999999999 333    222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  176 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN  176 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred             EEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence            222       45555553322 3357889999999999999999999999999999999999999999999999998764


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR----  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~----  232 (260)
                      ......          .+.+++..+++|+.+  ..++.++||||+||++|++++|..|+.   ..+++.++..+..    
T Consensus       177 ~~~~~~----------~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~  246 (350)
T 4b9d_A          177 STVELA----------RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS  246 (350)
T ss_dssp             HHHHHH----------HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCC
T ss_pred             CCcccc----------cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCC
Confidence            432111          112233334444444  458899999999999999999999987   5667777766543    


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++++.+++.+|...++..|..
T Consensus       247 ~~~s~~~~~li~~~L~~dP~~R~s  270 (350)
T 4b9d_A          247 LHYSYDLRSLVSQLFKRNPRDRPS  270 (350)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccCCHHHHHHHHHHccCChhHCcC
Confidence            233567788999998888888863

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=3.2e-44  Score=294.54  Aligned_cols=192  Identities=17%  Similarity=0.214  Sum_probs=140.7

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---CC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---DV   86 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---~~   86 (260)
                      |+...+.+++.++||+|+||.||+|++.+ .||||++.....      .....+.|.+|+.++++++||||+ ++   ..
T Consensus        31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~------~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~  103 (307)
T 3omv_A           31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDP------TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK  103 (307)
T ss_dssp             CBCCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSC------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cEEcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCC------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC
Confidence            45566778899999999999999999765 599998643221      112356799999999999999999 33   32


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       |+|.+++...  ...+++..+..|+.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 ~~~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  181 (307)
T 3omv_A          104 DNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred             CeEEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCcee
Confidence            33233       5666665433  23589999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........        ...+..++..+++|+.+     ..++.++||||||+++||++||+.|+.
T Consensus       182 ~~~~~~~~--------~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~  238 (307)
T 3omv_A          182 KSRWSGSQ--------QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS  238 (307)
T ss_dssp             --------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCCcce--------eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence            54322111        01112222233344433     348899999999999999999988753

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.8e-44  Score=298.62  Aligned_cols=224  Identities=13%  Similarity=0.220  Sum_probs=169.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      ...|+.+++||+|+||.||+|++  +|+.||||++......        ..+.+.+|+.++++++||||+ +++.  ...
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~  144 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--------RRELLFNEVVIMRDYQHENVVEMYNSYLVGD  144 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--------SGGGGHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--------HHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            45689999999999999999999  4899999997644322        134578999999999999999 3332  112


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      .++.++||+.++.+     ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus       145 ~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          145 ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             EEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            23334444444332     2348999999999999999999999999999999999999999999999999998765432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc------c
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR------R  233 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~------~  233 (260)
                      ...          .+.+++..+++|+.+  ..++.++||||+||++++|++|..|+.   ..+.+..+....+      .
T Consensus       225 ~~~----------~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~  294 (346)
T 4fih_A          225 PRR----------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLH  294 (346)
T ss_dssp             CCB----------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGG
T ss_pred             Ccc----------cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccc
Confidence            221          122333344455544  468999999999999999999999986   4566666655432      2


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++++.+++.+|...++..|..
T Consensus       295 ~~s~~~~dli~~~L~~dP~~R~t  317 (346)
T 4fih_A          295 KVSPSLKGFLDRLLVRDPAQRAT  317 (346)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             cCCHHHHHHHHHHcCCChhHCcC
Confidence            23567889999999999998864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.7e-44  Score=294.07  Aligned_cols=222  Identities=15%  Similarity=0.213  Sum_probs=165.8

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC------
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ------   87 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~------   87 (260)
                      +++..++||+|+||.||+|++.  +..||+|.+......      ....+.+.+|++++++++||||+ +++..      
T Consensus        27 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~  100 (290)
T 3fpq_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT------KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG  100 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC------HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT
T ss_pred             eEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC------HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC
Confidence            3466788999999999999984  889999987654322      12256799999999999999999 54421      


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEcc-CCcEEEEeecccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSS-DHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~-~~~~kl~DFg~~~  158 (260)
                      ...++.++||+.++.+      ...+++..+..++.|++.||+|||+++  |+||||||+|||+++ ++.+||+|||+|+
T Consensus       101 ~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          101 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             EEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             CcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            2223334444444333      236899999999999999999999998  999999999999985 7899999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhcc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYR-  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~-  232 (260)
                      .......            .+..++..+++|+.+ +.+++++||||+|+++++++||..|+.    ...+...+..+.. 
T Consensus       181 ~~~~~~~------------~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~  248 (290)
T 3fpq_A          181 LKRASFA------------KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP  248 (290)
T ss_dssp             GCCTTSB------------EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred             eCCCCcc------------CCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC
Confidence            5432211            122233333444433 558999999999999999999999985    4566666665432 


Q ss_pred             ----ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ...++.+.+++.+|...++..|..
T Consensus       249 ~~~~~~~~~~~~~li~~~L~~dP~~R~s  276 (290)
T 3fpq_A          249 ASFDKVAIPEVKEIIEGCIRQNKDERYS  276 (290)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCccCCHHHHHHHHHHccCChhHCcC
Confidence                223467889999999999998874

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=7.4e-45  Score=297.69  Aligned_cols=226  Identities=16%  Similarity=0.204  Sum_probs=167.0

Q ss_pred             cccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--C
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--Q   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~   87 (260)
                      +.|++++.||+|+||.||+|++     +++.||||++.........      ...+.+|++++++++||||+ +++.  .
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~~E~~il~~l~HpnIv~l~~~~~~   97 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD------RVRTKMERDILVEVNHPFIVKLHYAFQT   97 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE------CC------CCCCCCCCTTEECEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH------HHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence            5699999999999999999987     2678999987654332111      23578899999999999999 3332  1


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...++.++||+.++.+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            2223345555555444      3368999999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---c
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---R  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~  233 (260)
                      ......          .+..++..+++|+.+  ..++.++|+||+|++++++++|..|+.   ..+++..+..+..   .
T Consensus       178 ~~~~~~----------~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~  247 (304)
T 3ubd_A          178 DHEKKA----------YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ  247 (304)
T ss_dssp             ---CCC----------CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred             CCCccc----------cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC
Confidence            332211          122333444455544  568899999999999999999999987   6677777776543   3


Q ss_pred             cCCccHHHHHHHHHHhcccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ..++.+.+++.+|...++..|..+
T Consensus       248 ~~s~~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          248 FLSPEAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred             cCCHHHHHHHHHHcccCHHHCCCC
Confidence            346788999999999999999864

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1e-43  Score=291.27  Aligned_cols=231  Identities=15%  Similarity=0.162  Sum_probs=163.3

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L   83 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~   83 (260)
                      +...+.+.+.+.||+|+||.||+|++.       +..||||++....        ....+.|.+|++++++++||||+ +
T Consensus         9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~HpnIV~l   80 (299)
T 4asz_A            9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQHEHIVKF   80 (299)
T ss_dssp             BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--------HHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--------hHHHHHHHHHHHHHHhCCCCCCccE
Confidence            445567888999999999999999873       6789999864211        11256799999999999999999 3


Q ss_pred             eC----CCchhh-------hhHHHhhccCc----------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEE
Q psy7935          84 DD----VQKSAI-------QTLISNLDSQN----------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMI  142 (260)
Q Consensus        84 ~~----~~~~~~-------~~l~~~l~~~~----------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nil  142 (260)
                      ++    ....++       |+|.+++....          ....+++..+..++.|++.||+|||+++|+||||||+|||
T Consensus        81 ~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NIL  160 (299)
T 4asz_A           81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL  160 (299)
T ss_dssp             EEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEE
Confidence            33    222233       66777665421          1235899999999999999999999999999999999999


Q ss_pred             EccCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         143 LSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       143 l~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      ++.++.+||+|||+|+..........         .....+++.| +|+..  ..++.++|+||||+++||++| |+.|+
T Consensus       161 l~~~~~~Ki~DFGla~~~~~~~~~~~---------~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf  231 (299)
T 4asz_A          161 VGENLLVKIGDFGMSRDVYSTDYYRV---------GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW  231 (299)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCEEE---------TTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             ECCCCcEEECCcccceecCCCCceee---------cCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence            99999999999999976543321110         0111233333 44444  568999999999999999998 67653


Q ss_pred             c--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc-ccccccccCC
Q psy7935         219 D--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE-LRGRKRCMVG  260 (260)
Q Consensus       219 ~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~-~~~r~~~~~~  260 (260)
                      .                          ..+++.+|+...|.. ||++.++.+.|+++. ....+-.++|
T Consensus       232 ~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~-RPs~~~i~~~L~~~~~~~p~~ldilG  299 (299)
T 4asz_A          232 YQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHM-RKNIKGIHTLLQNLAKASPVYLDILG  299 (299)
T ss_dssp             TTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHHSCCCSCCCC
T ss_pred             CCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHHHhcCCccccCCC
Confidence            2                          446666666655554 466677766666552 2333444443

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.3e-43  Score=299.91  Aligned_cols=225  Identities=13%  Similarity=0.221  Sum_probs=171.6

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      +.++|+.+++||+|+||.||+|++.  |+.||||++.......        .+.+.+|+.++++++||||+ +++.  ..
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--------~~~~~~Ei~il~~l~HpnIV~l~~~~~~~  220 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--------RELLFNEVVIMRDYQHENVVEMYNSYLVG  220 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--------GGGHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH--------HHHHHHHHHHHHhCCCCCCCceEEEEEEC
Confidence            3466999999999999999999994  8999999976443211        34588999999999999999 3332  12


Q ss_pred             hhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          89 SAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ..++.++||+.++.+     ...+++..+..++.|++.||+|||++||+||||||+|||++.+|.+||+|||+|+.....
T Consensus       221 ~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~  300 (423)
T 4fie_A          221 DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  300 (423)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred             CEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence            223335555544433     234899999999999999999999999999999999999999999999999999876543


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc------
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR------  232 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~------  232 (260)
                      ....          .+.+++..+++|+.+  ..++.++||||+||++++|++|..|+.   ..+.+..+....+      
T Consensus       301 ~~~~----------~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~  370 (423)
T 4fie_A          301 VPRR----------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNL  370 (423)
T ss_dssp             CCCB----------CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCT
T ss_pred             Cccc----------cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCccc
Confidence            2221          123344445555554  468999999999999999999999976   4556666655432      


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       371 ~~~s~~~~dli~~~L~~dP~~R~t  394 (423)
T 4fie_A          371 HKVSPSLKGFLDRLLVRDPAQRAT  394 (423)
T ss_dssp             TSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcC
Confidence            223567899999999999988864

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.2e-43  Score=288.23  Aligned_cols=224  Identities=14%  Similarity=0.158  Sum_probs=160.5

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ++.+.+...++..++||+|+||.||+|++       +++.||||++.... . ..     ..+.|.+|+.++++++||||
T Consensus        19 ~~~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~-~~-----~~~~f~~E~~il~~l~HpNI   91 (308)
T 4gt4_A           19 KLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-E-GP-----LREEFRHEAMLRARLQHPNV   91 (308)
T ss_dssp             CCCBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-C-C------CHHHHHHHHHHHHHCCCTTB
T ss_pred             CcccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-C-hH-----HHHHHHHHHHHHHhCCCCCC
Confidence            44555666678889999999999999996       35789999864322 1 11     24679999999999999999


Q ss_pred             E-EeC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          82 C-LDD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        82 ~-~~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      + +++    ....++       |+|.+++.....             ...+++..+..++.|++.||+|||+++|+||||
T Consensus        92 V~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDL  171 (308)
T 4gt4_A           92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDL  171 (308)
T ss_dssp             CCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            9 333    222223       778888754321             235889999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-  213 (260)
                      ||+|||++.++.+||+|||+|+..........    .    ....++..+++|+.+  ..++.++|+||||+++||++| 
T Consensus       172 K~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~----~----~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~  243 (308)
T 4gt4_A          172 ATRNVLVYDKLNVKISDLGLFREVYAADYYKL----L----GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY  243 (308)
T ss_dssp             SGGGEEECGGGCEEECCSCCBCGGGGGGCBCS----S----SSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             cccceEECCCCCEEECCcccceeccCCCceeE----e----cccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhC
Confidence            99999999999999999999986543321110    0    111122223344443  668999999999999999998 


Q ss_pred             cccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHH
Q psy7935         214 EDKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAE  248 (260)
Q Consensus       214 ~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~  248 (260)
                      |..|+.                          ..+++.+|+...|.. ||++.++++.|+.
T Consensus       244 g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~-RPs~~ei~~~L~a  303 (308)
T 4gt4_A          244 GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSR-RPRFKDIHSRLRA  303 (308)
T ss_dssp             TCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhH-CcCHHHHHHHHHh
Confidence            665532                          345666666655554 5566666666654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.8e-42  Score=287.49  Aligned_cols=221  Identities=14%  Similarity=0.119  Sum_probs=154.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ...+.+.+.++||+|+||.||+|++.       +..||||++...        .....+.|.+|++++++++||||+ ++
T Consensus        38 i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--------~~~~~~~f~~E~~il~~l~HpnIV~l~  109 (329)
T 4aoj_A           38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--------SESARQDFQREAELLTMLQHQHIVRFF  109 (329)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--------SHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--------CHHHHHHHHHHHHHHHhCCCCCCCcEE
Confidence            34455777899999999999999873       678999986421        112356799999999999999999 33


Q ss_pred             C----CCchhh-------hhHHHhhccCcc------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcE
Q psy7935          85 D----VQKSAI-------QTLISNLDSQNI------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNM  141 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Ni  141 (260)
                      +    ....++       |+|.+++.....            ...+++..+..++.|++.||+|||+++|+||||||+||
T Consensus       110 g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NI  189 (329)
T 4aoj_A          110 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNC  189 (329)
T ss_dssp             EEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred             EEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhE
Confidence            3    222233       667766654321            23488999999999999999999999999999999999


Q ss_pred             EEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc
Q psy7935         142 ILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV  218 (260)
Q Consensus       142 ll~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~  218 (260)
                      |++.++.+||+|||+|+...........        ....++..+++|+..  ..++.++|+||||+++||++| |+.|+
T Consensus       190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~--------~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf  261 (329)
T 4aoj_A          190 LVGQGLVVKIGDFGMSRDIYSTDYYRVG--------GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW  261 (329)
T ss_dssp             EEETTTEEEECCCC------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             EECCCCcEEEcccccceeccCCCcceec--------CcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCC
Confidence            9999999999999999865433211100        011122223344443  568999999999999999998 67653


Q ss_pred             c--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 D--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 ~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      .                          +.+++.+|+...|.. ||++.++++.|+.+.
T Consensus       262 ~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~-RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          262 YQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQ-RHSIKDVHARLQALA  318 (329)
T ss_dssp             CSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTT-SCCHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhH-CcCHHHHHHHHHHHh
Confidence            2                          446666677655554 567777777776653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.2e-43  Score=291.38  Aligned_cols=186  Identities=14%  Similarity=0.102  Sum_probs=135.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|+..++||+|+||.||+|++.  |+.||||++..+..             ..+|+.++++++||||+ +++.  ....
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~~~~  124 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVREGPW  124 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEETTE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------------HHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            34677889999999999999984  89999999754322             24699999999999999 3332  1222


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeeccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQIKVST  163 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~~~~~  163 (260)
                      ++.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++ .+||+|||+|+.....
T Consensus       125 ~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          125 VNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred             EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence            3334445444333      23589999999999999999999999999999999999999887 6999999999876543


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ....+..     ...++.++..+++|+.+  ..++.++|+||+||++|++++|..|+.
T Consensus       205 ~~~~~~~-----~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~  257 (336)
T 4g3f_A          205 GLGKSLL-----TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT  257 (336)
T ss_dssp             --------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             Cccccee-----cCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence            2111100     00112233334455544  568899999999999999999987753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.6e-42  Score=286.78  Aligned_cols=221  Identities=17%  Similarity=0.206  Sum_probs=160.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEcC-------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-CCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYLG-------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-ADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~-   82 (260)
                      +.+.+.|++.+.||+|+||.||+|++.+       +.||||.+....       .....+.+.+|++++.++.| |||+ 
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-------~~~~~~~~~~E~~il~~l~hhpnIV~  132 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN  132 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------ChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence            5566789999999999999999999742       579999864321       11124679999999999976 8999 


Q ss_pred             EeCC---Cc--hhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          83 LDDV---QK--SAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        83 ~~~~---~~--~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                      +++.   ..  .++       |+|.+++.....             ...+++..+..++.|++.||+|||+++|+|||||
T Consensus       133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK  212 (353)
T 4ase_A          133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  212 (353)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccC
Confidence            4331   12  222       677777754221             2347899999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-  213 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-  213 (260)
                      |+|||++.++.+||+|||+|+.........         ..+...+++ +++|+.+  ..++.++||||||+++||++| 
T Consensus       213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~---------~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~  283 (353)
T 4ase_A          213 ARNILLSEKNVVKICDFGLARDIYKDPDYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL  283 (353)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSE---------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred             ccceeeCCCCCEEECcchhhhhcccCCCce---------eeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence            999999999999999999998654332211         011122333 3445544  568999999999999999998 


Q ss_pred             cccccc---------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         214 EDKAVD---------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       214 ~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      |..|+.                           +.+++.+|+...|.. ||++.++++.|.++
T Consensus       284 G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~-RPt~~eil~~L~~l  345 (353)
T 4ase_A          284 GASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ-RPTFSELVEHLGNL  345 (353)
T ss_dssp             SCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhH-CcCHHHHHHHHHHH
Confidence            676532                           345666666655554 56777777766655

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=287.64  Aligned_cols=227  Identities=15%  Similarity=0.213  Sum_probs=164.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ----   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~----   87 (260)
                      .+.|++++.||+|+||.||+|++  +|+.||||++.....      .....+.+.+|++++++++||||+ +++..    
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  126 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD------VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV  126 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS------SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc------chHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc
Confidence            35699999999999999999998  499999998643221      112246788999999999999999 44321    


Q ss_pred             ----chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          88 ----KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        88 ----~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                          ...+        ++|.+++..   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       127 ~~~~~~~~~ivmE~~~g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          127 PYGEFKSVYVVLDLMESDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             ccccCCEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecc
Confidence                1122        445555443   3369999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      +|+..........      ....+.+++..+++|+.+   .+++.++||||+||++++|++|..|+.   ..+.+..+..
T Consensus       204 la~~~~~~~~~~~------~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~  277 (398)
T 4b99_A          204 MARGLCTSPAEHQ------YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM  277 (398)
T ss_dssp             TCBCC-------C------CCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHH
T ss_pred             eeeecccCccccc------cccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence            9986643321110      111233344445556554   357899999999999999999998876   3344444332


Q ss_pred             hcc----------------------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYR----------------------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~----------------------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...                                  ...++.+.+++.+|...++..|..
T Consensus       278 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t  338 (398)
T 4b99_A          278 VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS  338 (398)
T ss_dssp             HHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             hcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC
Confidence            211                                  112355678899999999988864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.2e-42  Score=283.01  Aligned_cols=215  Identities=15%  Similarity=0.140  Sum_probs=153.4

Q ss_pred             ccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc---
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK---   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~---   88 (260)
                      .+.+.+.||+|+||.||+|+++|+.||||++....     .    ....+..|+..+.+++||||+ +++.    ..   
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~-----~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----E----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG-----H----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc-----h----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCce
Confidence            35667899999999999999999999999864221     1    122345677777889999999 4332    11   


Q ss_pred             -hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCcEEEccCCcEEEE
Q psy7935          89 -SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN--------NIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        89 -~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                       .++       ++|.+++...    .+++..+.+++.|++.||+|||++        +|+||||||+|||++.++.+||+
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~  150 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE
Confidence             122       5555555443    478888999999999999999987        99999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeeccccccc------
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTEDKAV------  218 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~------  218 (260)
                      |||+|+......+....  .    ..+..++..+++|+.+        ..+++++|+||||+++||++||..|+      
T Consensus       151 DFGla~~~~~~~~~~~~--~----~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          151 DLGLAVRHDSATDTIDI--A----PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             CCTTCEEEETTTTEESC--C---------CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             eCCCCccccCCCCceee--e----cccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            99999876544321100  0    0111222223333333        24778999999999999999874211      


Q ss_pred             -----------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         219 -----------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       219 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                                               .+.+++.+|+...|.. ||++.++++.|.++..
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~-RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA-RLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             cccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhH-CcCHHHHHHHHHHHHH
Confidence                                                     1346777788866766 6799999999987753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.3e-41  Score=276.70  Aligned_cols=190  Identities=19%  Similarity=0.310  Sum_probs=129.3

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc-
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK-   88 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~-   88 (260)
                      .|++++.||+|+||.||+|++.  |+.||||++....       .....+.+.+|+.++++++||||+ +++.    .. 
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~   78 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT   78 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcc
Confidence            4788999999999999999984  8999999865322       112346789999999999999999 3332    11 


Q ss_pred             ---------hhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          89 ---------SAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        89 ---------~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                               ..+         ++|.+++..........+..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus        79 ~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vK  158 (299)
T 4g31_A           79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK  158 (299)
T ss_dssp             --------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             ccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEE
Confidence                     112         45555555443233455677888999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccc--cccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYV--LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      |+|||+|+.........+....  ......+.+++..+++|+.+  ..+++++||||+|++++++++
T Consensus       159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~  225 (299)
T 4g31_A          159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY  225 (299)
T ss_dssp             ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS
T ss_pred             EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc
Confidence            9999999877554322211100  00111223344444555544  468999999999999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=9.7e-40  Score=274.66  Aligned_cols=193  Identities=12%  Similarity=0.185  Sum_probs=140.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----E
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----L   83 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~   83 (260)
                      .+.|++.+.||+|+||.||+|++.     ++.||+|.+....          ...++.+|+++++.+ .||||+     +
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----------~~~~~~~E~~~l~~~~~h~nIv~l~~~~   89 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------HPIRIAAELQCLTVAGGQDNVMGVKYCF   89 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            456899999999999999999872     6789999864322          134678899999988 699999     3


Q ss_pred             eCCCchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-CcEEEEeeccccc
Q psy7935          84 DDVQKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFGLSQI  159 (260)
Q Consensus        84 ~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-~~~kl~DFg~~~~  159 (260)
                      .+...  ++.++||+.+..+   -+.+++..+..++.|++.||+|||++||+||||||+|||++.+ +.+||+|||+|+.
T Consensus        90 ~~~~~--~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           90 RKNDH--VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG  167 (361)
T ss_dssp             EETTE--EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EECCE--EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence            33232  3345666655433   2248899999999999999999999999999999999999976 8999999999976


Q ss_pred             ccccccccccc------------------cccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccc
Q psy7935         160 KVSTEDKAVDL------------------YVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       160 ~~~~~~~~~d~------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      .........+.                  ........+.+++..+.+|+.+   ..++.++|+||+||+++++++|+.|+
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence            54432211110                  0011112223344445566644   34789999999999999999999887


Q ss_pred             c
Q psy7935         219 D  219 (260)
Q Consensus       219 ~  219 (260)
                      .
T Consensus       248 ~  248 (361)
T 4f9c_A          248 Y  248 (361)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.2e-39  Score=287.59  Aligned_cols=229  Identities=12%  Similarity=0.137  Sum_probs=170.0

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      .+-+.|++++.||+|+||.||+|++  +|+.||||++..+.........  .......++.+++.++||||+     |.+
T Consensus       186 ~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~--~~~~E~~~l~ll~~~~HP~IV~l~~~f~~  263 (689)
T 3v5w_A          186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET--LALNERIMLSLVSTGDCPFIVCMSYAFHT  263 (689)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH--HHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             CchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHH--HHHHHHHHHHHHhhCCCCCEeEEEEEEEE
Confidence            3456799999999999999999998  4999999997543321111100  112223446777888999999     344


Q ss_pred             CCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ....++  ++||+.++.+      ...+++..+..++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+.
T Consensus       264 ~~~lyl--VmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          264 PDKLSF--ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             SSEEEE--EECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEE--EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeee
Confidence            333333  4555544433      23589999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc------HHHHHHHHHhh
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWILSS  230 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~~~~  230 (260)
                      ......            .+.+++..+++|+.+   ..++.++|+||+||++|+|++|..|+.      ..++...++..
T Consensus       342 ~~~~~~------------~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~  409 (689)
T 3v5w_A          342 FSKKKP------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM  409 (689)
T ss_dssp             CSSCCC------------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC
T ss_pred             cCCCCC------------CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Confidence            543321            233444455566655   258899999999999999999999985      33455555543


Q ss_pred             c---cccCCccHHHHHHHHHHhcccccccc
Q psy7935         231 Y---RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       231 ~---~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      .   +...++.+.+++.+|...++..|..+
T Consensus       410 ~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          410 AVELPDSFSPELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence            2   34456788999999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.8e-38  Score=278.51  Aligned_cols=220  Identities=15%  Similarity=0.159  Sum_probs=166.9

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      ++|++++.||+|+||.||+|++  +|+.||+|++....        ....+.+.+|+.+++.++||||+     +.+...
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--------ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSE
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--------hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            5689999999999999999998  48999999865322        11246788999999999999999     333333


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC--CcEEEEeeccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD--HHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~--~~~kl~DFg~~~~  159 (260)
                      .++       |+|++++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.+  +.+||+|||+|+.
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  306 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred             EEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence            333       5666665432  2358999999999999999999999999999999999999864  8999999999987


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-  233 (260)
                      ......           ..+..++..+.+|+.+  ..++.++||||+||++++|++|..|+.   ..+.+..+...... 
T Consensus       307 ~~~~~~-----------~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~  375 (573)
T 3uto_A          307 LDPKQS-----------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM  375 (573)
T ss_dssp             CCTTSE-----------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCC
T ss_pred             ccCCCc-----------eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCC
Confidence            644321           1122233334444444  557899999999999999999999876   56667776665332 


Q ss_pred             ------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ..++.+.+++.+|...++..|..
T Consensus       376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t  404 (573)
T 3uto_A          376 DDSAFSGISEDGKDFIRKLLLADPNTRMT  404 (573)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcC
Confidence                  22456688888888888888863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=8.2e-36  Score=244.86  Aligned_cols=226  Identities=13%  Similarity=0.179  Sum_probs=160.7

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      .....+.|++.+.||+|+||.||+|++.  +..||+|.+.......     ....+.+.+|+.++.+++||||+ +++  
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~hp~iv~~~~~~   80 (294)
T 4eqm_A            6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-----EETLKRFEREVHNSSQLSHQNIVSMIDVD   80 (294)
T ss_dssp             SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC-----HHHHHHHHHHHHHHTTCCBTTBCCEEEEE
T ss_pred             hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc-----HHHHHHHHHHHHHHhcCCCCCCceEEEee
Confidence            3444677999999999999999999984  8899999865433221     22356789999999999999999 322  


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        ....++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        81 ~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~  157 (294)
T 4eqm_A           81 EEDDCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI  157 (294)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred             eeCCeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCC
Confidence              222222       3555555432   2588999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---------------  219 (260)
                      +............         ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.               
T Consensus       158 ~~~~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~  228 (294)
T 4eqm_A          158 AKALSETSLTQTN---------HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS  228 (294)
T ss_dssp             STTC----------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSC
T ss_pred             ccccccccccccC---------ccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhcc
Confidence            9765433211110         11122223334333  457788999999999999999987753               


Q ss_pred             ---------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcccc
Q psy7935         220 ---------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       220 ---------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~  253 (260)
                                     +.+++.+|+...+..+++++.++.+.+.++....
T Consensus       229 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          229 VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence                           3456666666666665566677777766654433

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.6e-36  Score=250.59  Aligned_cols=221  Identities=14%  Similarity=0.144  Sum_probs=164.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||||++......      ....+.+.+|+.+++.++||||+ ++    +...
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   88 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN------PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT   88 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence            4589999999999999999998  4899999987543321      12246788999999999999999 22    2222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            222       4555555432   358899999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      ......           ...+...+.+|+..   ...++++|+||+|++++++++|..|+.   ..++.+.+..+.   +
T Consensus       166 ~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p  234 (328)
T 3fe3_A          166 VGGKLD-----------AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP  234 (328)
T ss_dssp             SSCGGG-----------TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred             CCCccc-----------cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            332110           11122223333333   223578999999999999999999876   566666666653   2


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++++|...++..|..
T Consensus       235 ~~~s~~~~~li~~~L~~dP~~R~t  258 (328)
T 3fe3_A          235 FYMSTDCENLLKRFLVLNPIKRGT  258 (328)
T ss_dssp             TTSCHHHHHHHHHHCCSSTTTSCC
T ss_pred             CCCCHHHHHHHHHHCCCChhHCcC
Confidence            334577788888888888888854

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=9.9e-36  Score=246.06  Aligned_cols=221  Identities=18%  Similarity=0.235  Sum_probs=156.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      ...+.|++.+.||+|+||.||+|+++|+.||||++......      ......+.+|++++++++||||+ ++    +..
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  107 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFH------AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP  107 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCS------HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCC------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            44566889999999999999999999999999986543321      11245788999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ..++       ++|.+++........+++..++.++.|++.||+|||++|  |+||||||+|||++.++.+||+|||++.
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  187 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR  187 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence            2222       466666655432334889999999999999999999999  9999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-----------------  219 (260)
                      .........          ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.                 
T Consensus       188 ~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  257 (309)
T 3p86_A          188 LKASTFLSS----------KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKR  257 (309)
T ss_dssp             ------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCC
T ss_pred             ccccccccc----------ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            543321110          011112222333333  457889999999999999999876643                 


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                +.+++.+|+...+.. |+++.++++.|..+.
T Consensus       258 ~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          258 LEIPRNLNPQVAAIIEGCWTNEPWK-RPSFATIMDLLRPLI  297 (309)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                      456777777755555 577788877776553

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5e-36  Score=249.21  Aligned_cols=216  Identities=16%  Similarity=0.143  Sum_probs=161.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK-   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~-   88 (260)
                      .+.|++.+.||+|+||.||+|++.++.||||++....         .......+|+.++.+++||||+ +++.    .. 
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   93 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD---------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV   93 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG---------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred             hhhchhhheecccCceEEEEEEECCCEEEEEEeecCc---------hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence            3558999999999999999999999999999863221         1234566799999999999999 3322    11 


Q ss_pred             ---hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC----------CceecCCCCCcEEEccCCc
Q psy7935          89 ---SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN----------NIIHGDLTTSNMILSSDHH  148 (260)
Q Consensus        89 ---~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~----------~i~H~dlkp~Nill~~~~~  148 (260)
                         .++       ++|.+++...    .+++..++.++.|++.||+|||++          ||+||||||+|||++.++.
T Consensus        94 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~  169 (322)
T 3soc_A           94 DVDLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLT  169 (322)
T ss_dssp             SEEEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCC
T ss_pred             CceEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCe
Confidence               112       4666666543    388999999999999999999999          9999999999999999999


Q ss_pred             EEEEeecccccccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc--
Q psy7935         149 LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD--  219 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~--  219 (260)
                      +||+|||+++...........        ....++..+.+|+..       ..++.++|+||+|++++++++|..|+.  
T Consensus       170 ~kL~DFg~a~~~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          170 ACIADFGLALKFEAGKSAGDT--------HGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             EEECCCTTCEEECTTSCCCCC--------TTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             EEEccCCcccccccccCcccc--------ccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence            999999999765443221100        001111122233322       356678999999999999999865541  


Q ss_pred             ----------------------------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         220 ----------------------------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       220 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                                                                    +.+++.+|+...+.. |+++.++++.|.++...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEA-RLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHH
T ss_pred             cchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHHHH
Confidence                                                          567888999876766 67899999999887643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.6e-35  Score=245.35  Aligned_cols=225  Identities=15%  Similarity=0.203  Sum_probs=166.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+.|++++.||+|+||.||+|++.  |+.||+|++....     .........+.+|+.+++.++||||+     +.+..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~   78 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC
Confidence            356888999999999999999984  8999999864321     11112245688999999999999999     33333


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+  .+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        79 ~~~--lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~  156 (337)
T 1o6l_A           79 RLC--FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             EEE--EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             EEE--EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence            322  34444443322      2358899999999999999999999999999999999999999999999999997543


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      .....          ..+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+.   +.
T Consensus       157 ~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~  226 (337)
T 1o6l_A          157 SDGAT----------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR  226 (337)
T ss_dssp             CTTCC----------BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred             cCCCc----------ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            22111          1122233333444444  457889999999999999999998875   555666655543   33


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++++|...++..|..
T Consensus       227 ~~s~~~~~li~~lL~~dP~~R~g  249 (337)
T 1o6l_A          227 TLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             CCCHHHHHHHHHHhhcCHHHhcC
Confidence            44677899999999999999873

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=248.99  Aligned_cols=226  Identities=15%  Similarity=0.153  Sum_probs=166.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~   86 (260)
                      .+.|++++.||+|+||.||+|++.  |+.||||++....     .........+.+|..++..+ +||||+     +.+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-----hcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence            356899999999999999999984  8899999864321     12222345688899999988 799999     3333


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...  +.+++|+.+..+      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        97 ~~~--~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A           97 DRL--FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             SEE--EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CEE--EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            332  234444443322      235899999999999999999999999999999999999999999999999999753


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      ......          ..+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+.   +
T Consensus       175 ~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p  244 (353)
T 3txo_A          175 ICNGVT----------TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP  244 (353)
T ss_dssp             CC-------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred             ccCCcc----------ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            322111          1112223333444443  457889999999999999999999986   566777776654   3


Q ss_pred             ccCCccHHHHHHHHHHhcccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ...++.+.+++++|...++..|..+
T Consensus       245 ~~~~~~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          245 TWLHEDATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred             CCCCHHHHHHHHHHhhhCHHHccCC
Confidence            3345778999999999999999765

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=6.8e-35  Score=245.77  Aligned_cols=228  Identities=16%  Similarity=0.159  Sum_probs=167.8

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~   85 (260)
                      ...++|++.+.||+|+||.||+|++.  |+.||+|++.........  .....+.+.+|+.++++++||||+ +    .+
T Consensus         9 ~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~   86 (361)
T 2yab_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVCREEIEREVSILRQVLHPNIITLHDVYEN   86 (361)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc--chhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe
Confidence            34566899999999999999999984  899999987655432211  011246789999999999999999 2    22


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----cEEEEee
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----HLVMIDF  154 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----~~kl~DF  154 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++    .+||+||
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DF  163 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF  163 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence            222222       5666666543   3689999999999999999999999999999999999998866    7999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      |++.........           ....++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.+..+..
T Consensus       164 G~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~  232 (361)
T 2yab_A          164 GLAHEIEDGVEF-----------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITA  232 (361)
T ss_dssp             SSCEECCTTCCC-----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT
T ss_pred             CCceEcCCCCcc-----------ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            999765443211           111122223344433  457889999999999999999998875   4556666555


Q ss_pred             hcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...       ...++.+.+++.+|...++..|..
T Consensus       233 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  266 (361)
T 2yab_A          233 VSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT  266 (361)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             cCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC
Confidence            332       223456788888888888888864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.7e-35  Score=249.76  Aligned_cols=225  Identities=13%  Similarity=0.181  Sum_probs=165.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      ...+.|++++.||+|+||.||+|++.  ++.||+|++....     .........+.+|+.+++.++||||+     +.+
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~   86 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK-----CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD   86 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh-----cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            34467999999999999999999984  7899999864322     11222346788999999999999999     333


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~  163 (384)
T 4fr4_A           87 EEDMFMVVDLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA  163 (384)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceee
Confidence            333222       4555555543   358999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc------HHHHHHHH
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWI  227 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~  227 (260)
                      ........           .+..++..+.+|+..     ..++.++|+||+|++++++++|..|+.      ..++...+
T Consensus       164 ~~~~~~~~-----------~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~  232 (384)
T 4fr4_A          164 MLPRETQI-----------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF  232 (384)
T ss_dssp             ECCTTCCB-----------CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH
T ss_pred             eccCCCce-----------eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH
Confidence            65432211           111222223344433     247889999999999999999998874      33444443


Q ss_pred             Hhh---ccccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSS---YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~---~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...   ++...++.+.+++.+|...++..|..
T Consensus       233 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s  264 (384)
T 4fr4_A          233 ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS  264 (384)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhcccCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence            332   23344567788888888888888875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.8e-35  Score=242.70  Aligned_cols=220  Identities=15%  Similarity=0.172  Sum_probs=158.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ....+.|++.+.||+|+||.||+|++      +++.||||++....        ....+.+.+|+.++++++||||+ ++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~   77 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--------EEHLRDFEREIEILKSLQHDNIVKYK   77 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--------HHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--------HHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            34567799999999999999999985      48899999864221        11246789999999999999999 43


Q ss_pred             CC----Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          85 DV----QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        85 ~~----~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                      +.    ....+         ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||
T Consensus        78 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl  155 (295)
T 3ugc_A           78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKI  155 (295)
T ss_dssp             EEECHHHHTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEE
T ss_pred             EEEecCCCCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEE
Confidence            32    11112         4566665443  234888999999999999999999999999999999999999999999


Q ss_pred             Eeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccc-----------
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA-----------  217 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~-----------  217 (260)
                      +|||++............        .....+.. +.+|+..  ..+++++|+||+|+++++++++..|           
T Consensus       156 ~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~  227 (295)
T 3ugc_A          156 GDFGLTKVLPQDKEFFKV--------KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRM  227 (295)
T ss_dssp             CCCCSCC---------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHH
T ss_pred             ccCcccccccCCcceeee--------ccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhh
Confidence            999999766443211100        00011111 2333333  4578899999999999999986432           


Q ss_pred             -------------------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 -------------------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                                     ..+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          228 IGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ-RPSFRDLALRVDQIR  290 (295)
T ss_dssp             HCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             hcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhh-CCCHHHHHHHHHHHH
Confidence                                           23667888888866665 678899988888775

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=4e-35  Score=248.82  Aligned_cols=223  Identities=18%  Similarity=0.201  Sum_probs=162.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      ...+.|++.+.||+|+||.||+|++.  ++.||||.+....       .......+.+|+.++++++||||+ +++    
T Consensus       111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~  183 (377)
T 3cbl_A          111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ  183 (377)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-------CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec
Confidence            34566888999999999999999994  8899999854221       111245688999999999999999 322    


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus       184 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~  261 (377)
T 3cbl_A          184 KQPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR  261 (377)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCce
Confidence            222222       4555555432  2358889999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV----------------  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~----------------  218 (260)
                      ..........         .....+.+.| +|+..  ..++.++|+||||++++++++ |..|+                
T Consensus       262 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  332 (377)
T 3cbl_A          262 EEADGVYAAS---------GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGG  332 (377)
T ss_dssp             ECTTSEEECC---------SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTC
T ss_pred             ecCCCceeec---------CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            5433211100         0011122223 33333  567889999999999999998 55432                


Q ss_pred             ----------cHHHHHHHHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         219 ----------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       219 ----------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                                ...+++.+|+...+.. ||++.++++.|.++..+.|
T Consensus       333 ~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~~i~~~L~~i~~~~r  377 (377)
T 3cbl_A          333 RLPCPELCPDAVFRLMEQCWAYEPGQ-RPSFSTIYQELQSIRKRHR  377 (377)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHHC-
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchh-CcCHHHHHHHHHHHHhhcC
Confidence                      2567888888866665 6788999999988875544

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.7e-34  Score=233.68  Aligned_cols=220  Identities=10%  Similarity=0.138  Sum_probs=159.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ...+.|++.+.||+|+||.||+|++.++.||+|++......      ....+.+.+|+.++++++||||+ +++    ..
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   80 (271)
T 3kmu_A            7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWS------TRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP   80 (271)
T ss_dssp             CCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCC------HHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT
T ss_pred             CCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccC------HHHHHHHHHHHHHHHhcCCCchhheEEEEccCC
Confidence            34456889999999999999999999999999986543211      11246799999999999999999 322    21


Q ss_pred             chh--h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 KSA--I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 ~~~--~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      ...  +       ++|.+++.... ...+++..++.++.|++.||+|||+++  ++||||||+|||++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~  159 (271)
T 3kmu_A           81 APHPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV  159 (271)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGS
T ss_pred             CCCeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccc
Confidence            122  2       57777776543 335899999999999999999999999  99999999999999999999999998


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeecccccccc-----------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVD-----------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~-----------------  219 (260)
                      +..........+..|..++.+.          ......++.++|+||+|++++++++|..|+.                 
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~----------~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  229 (271)
T 3kmu_A          160 KFSFQSPGRMYAPAWVAPEALQ----------KKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLR  229 (271)
T ss_dssp             CCTTSCTTCBSCGGGSCHHHHH----------SCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             eeeecccCccCCccccChhhhc----------cCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC
Confidence            7654333322222222222211          0111233457999999999999999987643                 


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                ..+++.+|+...+.. |+++.++++.|.++.
T Consensus       230 ~~~~~~~~~~~~~li~~~l~~~p~~-Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          230 PTIPPGISPHVSKLMKICMNEDPAK-RPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHC
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHhh
Confidence                      345666666655554 566777777776654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.8e-35  Score=241.63  Aligned_cols=193  Identities=17%  Similarity=0.167  Sum_probs=137.1

Q ss_pred             cccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ....+.|++.+.||+|+||.||+|++  +++.||||++.......     ......+.+|+.++.+++||||+ +++.  
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   82 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD-----PSFYLRFRREAQNAAALNHPAIVAVYDTGE   82 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS-----HHHHHHHHHHHTTCCCCCCTTBCCEEEEEE
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC-----HHHHHHHHHHHHHHHcCCCCCcceEEEeee
Confidence            34456789999999999999999998  48899999865433222     22346789999999999999999 3332  


Q ss_pred             --Cch----hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          87 --QKS----AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        87 --~~~----~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                        ...    ++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|
T Consensus        83 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~D  159 (311)
T 3ork_A           83 AETPAGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD  159 (311)
T ss_dssp             EEETTEEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECC
T ss_pred             ccCCCCcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEee
Confidence              111    22       4555555432   3588899999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++............       .....+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       160 fg~a~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~  220 (311)
T 3ork_A          160 FGIARAIADSGNSVTQ-------TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT  220 (311)
T ss_dssp             CSCC-------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccCccccccccccccc-------ccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            9999765443211110       0011122223333333  457889999999999999999987754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.5e-35  Score=250.82  Aligned_cols=226  Identities=15%  Similarity=0.243  Sum_probs=163.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~   86 (260)
                      .+.|++++.||+|+||.||+|++.  ++.||+|++.........     ....+.+|..++.++ +||||+     +.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~-----~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE-----DIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC---------CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHH-----HHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            356899999999999999999984  889999987654332211     124577888888877 899999     3333


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++  +++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       126 ~~~~l--V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          126 SRLFF--VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             SEEEE--EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CEEEE--EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            33232  4444443322      235899999999999999999999999999999999999999999999999999753


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------------HHHHHHH
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------------FRDMFNW  226 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------------~~~~~~~  226 (260)
                      .......          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.            ...+.+.
T Consensus       204 ~~~~~~~----------~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~  273 (396)
T 4dc2_A          204 LRPGDTT----------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  273 (396)
T ss_dssp             CCTTCCB----------CCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH
T ss_pred             ccCCCcc----------ccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH
Confidence            3221111          112222233344433  457889999999999999999999984            2234445


Q ss_pred             HHhhc---cccCCccHHHHHHHHHHhcccccccc
Q psy7935         227 ILSSY---RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       227 ~~~~~---~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +....   +...++.+.+++++|...++..|...
T Consensus       274 i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          274 ILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            44432   33446778999999999999999763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=9.4e-35  Score=241.72  Aligned_cols=226  Identities=15%  Similarity=0.189  Sum_probs=168.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++ +|+.||||++.......       ....+.+|++++++++||||+     +.+..
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred             HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-------HHHHHHHHHHHHHhccCCCccceEEEEecCC
Confidence            345688999999999999999997 48899999864332111       123588999999999999999     22222


Q ss_pred             chhh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhC---CceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 KSAI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSN---NIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      ..++       ++|.+++..... ...+++..+..++.|++.||+|||++   ||+||||||+|||++.++.+||+|||+
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  180 (326)
T 3uim_A          101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL  180 (326)
T ss_dssp             CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSS
T ss_pred             ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcc
Confidence            2222       467777655431 33488999999999999999999999   999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc--------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--------------  219 (260)
                      +...........          ....+.+.| +|+..  ..+++++|+||+|++++++++|..|++              
T Consensus       181 ~~~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          181 AKLMDYKDTHVT----------TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CEECCSSSSCEE----------CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             ccccCccccccc----------ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            976543321111          111122223 33333  457889999999999999999988763              


Q ss_pred             ------------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcccccccc
Q psy7935         220 ------------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       220 ------------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                                                    +.+++.+|+...+.. |+++.++++.|+......|+.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~ell~~L~~~~~~~~~~~  317 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME-RPKMSEVVRMLEGDGLAERWEE  317 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGG-SCCHHHHHHHHHTSSCSSSCC-
T ss_pred             HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCcc-CCCHHHHHHHhcCcchhhhhhh
Confidence                                          457777888866666 7899999999998877776643

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=5.3e-35  Score=240.40  Aligned_cols=217  Identities=15%  Similarity=0.195  Sum_probs=155.4

Q ss_pred             cccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc--cCCCCeE-EeCC--
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK--CRMADIC-LDDV--   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~-~~~~--   86 (260)
                      ....+.|++.+.||+|+||.||+|+++++.||||++...           ....+.+|.+++..  ++||||+ +++.  
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~   72 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-----------DEKSWFRETELYNTVMLRHENILGFIASDM   72 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-----------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-----------cchhhHHHHHHHHHhhccCcCeeeEEEeec
Confidence            345667899999999999999999999999999985322           12345556665555  7999999 3322  


Q ss_pred             --C--ch--hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhh--------hCCceecCCCCCcEEEcc
Q psy7935          87 --Q--KS--AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMH--------SNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        87 --~--~~--~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~i~H~dlkp~Nill~~  145 (260)
                        .  ..  ++       ++|.+++...    .+++..++.++.|++.||+|||        +++|+||||||+|||++.
T Consensus        73 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~  148 (301)
T 3q4u_A           73 TSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK  148 (301)
T ss_dssp             EEETTEEEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECT
T ss_pred             cccCCCceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcC
Confidence              1  11  11       5777777543    4888999999999999999999        999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCccccc--------cccccceeEeecceeeeeccc---
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ--------SYNHHLVMIDFGLSQIKVSTE---  214 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~di~s~g~~~~~~~~~---  214 (260)
                      ++.+||+|||++............  ..    ....++..+.+|+...        .+++++|+||+|++++++++|   
T Consensus       149 ~~~~kl~Dfg~a~~~~~~~~~~~~--~~----~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~  222 (301)
T 3q4u_A          149 NGQCCIADLGLAVMHSQSTNQLDV--GN----NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVS  222 (301)
T ss_dssp             TSCEEECCCTTCEEEETTTTEEEC--CC----CCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCB
T ss_pred             CCCEEEeeCCCeeecccccccccc--cc----cccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcC
Confidence            999999999999765443221100  00    0011111222333221        455789999999999999998   


Q ss_pred             -------cccc-------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         215 -------DKAV-------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       215 -------~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                             ..|+                                     .+.+++.+|+...+.. |+++.++++.|.+++
T Consensus       223 ~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~~i~~~L~~i~  301 (301)
T 3q4u_A          223 NGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSA-RLTALRIKKTLTKID  301 (301)
T ss_dssp             TTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGG-SCCHHHHHHHHHHHC
T ss_pred             ccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhh-CCCHHHHHHHHhccC
Confidence                   3333                                     1456788888866665 678888888887763

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.4e-34  Score=237.84  Aligned_cols=221  Identities=18%  Similarity=0.246  Sum_probs=157.7

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----V   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~   86 (260)
                      ..+.|++.+.||+|+||.||+|.+  +|+.||||++......        ..+.+.+|+.++++++||||+ +++    .
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   89 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVG   89 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--------HHHHHHHHHHHHhcCCCCCCCeEeEEEEEC
Confidence            445699999999999999999997  4899999986543221        245688999999999999999 332    2


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~  165 (297)
T 3fxz_A           90 DELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ  165 (297)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CEEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCcee
Confidence            22222       4444444432    488899999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---  231 (260)
                      .........          ...+...+.+|+..  ..+++++|+||+|++++++++|..|+.   .......+....   
T Consensus       166 ~~~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  235 (297)
T 3fxz_A          166 ITPEQSKRS----------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE  235 (297)
T ss_dssp             CCSTTCCBC----------CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC
T ss_pred             cCCcccccC----------CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            544322111          11122223333333  457889999999999999999988875   222222222211   


Q ss_pred             ---cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         +...++.+.+++.+|...++..|..
T Consensus       236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps  263 (297)
T 3fxz_A          236 LQNPEKLSAIFRDFLNRCLEMDVEKRGS  263 (297)
T ss_dssp             CSCGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCccccCHHHHHHHHHHccCChhHCcC
Confidence               1223445677777777777777753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=238.90  Aligned_cols=225  Identities=18%  Similarity=0.249  Sum_probs=161.6

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|.+.+.||+|+||.||+|++.  ++.||+|.+...        .....+.+.+|++++++++||||+ +++    ..
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   80 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--------DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK   80 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC
Confidence            456888999999999999999984  889999975321        112356799999999999999999 322    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           81 RLNFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             eeEEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceec
Confidence            2222       4666666542  245888999999999999999999999999999999999999999999999999776


Q ss_pred             cccccccccccc----cccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc-----------------
Q psy7935         161 VSTEDKAVDLYV----LKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA-----------------  217 (260)
Q Consensus       161 ~~~~~~~~d~~~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~-----------------  217 (260)
                      ............    .........+...+.+|+..  ..+++++|+||+|+++++++++..|                 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~  238 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG  238 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHH
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhc
Confidence            443221110000    00000111222223344433  4578899999999999999977543                 


Q ss_pred             -----------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 -----------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 -----------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                 ..+.+++.+|+...+.. |+++.++++.|..+.
T Consensus       239 ~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          239 FLDRYCPPNCPPSFFPITVRCCDLDPEK-RPSFVKLEHWLETLR  281 (310)
T ss_dssp             HHHHTCCTTCCTTHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             cccccCCCCCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                       23677999999977776 689999999888765

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.1e-34  Score=238.53  Aligned_cols=231  Identities=14%  Similarity=0.128  Sum_probs=161.6

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCch------------------hhHHHHHHHHHHHHhhhcc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPK------------------LDEALTKERITSEIRGLMK   75 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~------------------~~~~~~~~~~~~e~~~l~~   75 (260)
                      +.|++.+.||+|+||.||+|++  +++.||||++.........                  .......+.+.+|++++++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            5688899999999999999998  4889999987654321110                  0001123568899999999


Q ss_pred             cCCCCeE-Ee----CCCchhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          76 CRMADIC-LD----DVQKSAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        76 ~~h~~i~-~~----~~~~~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      ++||||+ ++    +.....++.+++|+.+..+     ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~  172 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGE  172 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC
Confidence            9999999 32    2233344557777765443     335889999999999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCccccc-----cccccceeEeecceeeeecccccccc-
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ-----SYNHHLVMIDFGLSQIKVSTEDKAVD-  219 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~di~s~g~~~~~~~~~~~~~~-  219 (260)
                      ++.+||+|||++...........          ...+...+.+|+...     ..+.++|+||+|++++++++|..|+. 
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  242 (298)
T 2zv2_A          173 DGHIKIADFGVSNEFKGSDALLS----------NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD  242 (298)
T ss_dssp             TSCEEECCCTTCEECSSSSCEEC----------CCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCEEEecCCCcccccccccccc----------CCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            99999999999976543321110          111122223333331     24678999999999999999998876 


Q ss_pred             --HHHHHHHHHhhcc-----ccCCccHHHHHHHHHHhccccccc
Q psy7935         220 --FRDMFNWILSSYR-----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       220 --~~~~~~~~~~~~~-----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        ...+...+.....     ...++.+.+++.+|...++..|..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s  286 (298)
T 2zv2_A          243 ERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV  286 (298)
T ss_dssp             SSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC
T ss_pred             ccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC
Confidence              3444444443321     123467789999999888888864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=6e-35  Score=245.24  Aligned_cols=223  Identities=15%  Similarity=0.172  Sum_probs=168.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..+.|++++.||+|+||.||+|++  +|+.||+|++....     .......+.+.+|+.+++.++||||+     +.+.
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-----VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN  113 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH-----hccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence            345689999999999999999998  48999999864322     11222346788999999999999999     2332


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~  190 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR  190 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEccccccee
Confidence            22222       4455555432   2588999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---  231 (260)
                      .....             .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+.   
T Consensus       191 ~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~  257 (350)
T 1rdq_E          191 VKGRT-------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF  257 (350)
T ss_dssp             CSSCB-------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             ccCCc-------------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            53321             111222233344433  457889999999999999999998876   556666666543   


Q ss_pred             cccCCccHHHHHHHHHHhcccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +...++.+.+++.+|...++..|..+
T Consensus       258 p~~~~~~~~~li~~lL~~dp~~R~~~  283 (350)
T 1rdq_E          258 PSHFSSDLKDLLRNLLQVDLTKRFGN  283 (350)
T ss_dssp             CTTCCHHHHHHHHHHSCSCTTTCTTS
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhccCC
Confidence            23446788999999999999999764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.1e-34  Score=234.72  Aligned_cols=220  Identities=13%  Similarity=0.171  Sum_probs=161.6

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++. +..||+|++.....         ....+.+|++++.+++||||+ +++    ..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   76 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY   76 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            4566889999999999999999986 56899998643321         135688999999999999999 222    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           77 PIYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             SEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEEC
T ss_pred             ceEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceec
Confidence            2222       4455555432  335889999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD------------------  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~------------------  219 (260)
                      .........         ...+...+.+|+..  ..+++++|+||+|++++++++ |..|+.                  
T Consensus       155 ~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  225 (268)
T 3sxs_A          155 LDDQYVSSV---------GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY  225 (268)
T ss_dssp             CTTCEEECC---------SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC
T ss_pred             chhhhhccc---------CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCC
Confidence            443211100         00011112333333  357889999999999999998 765532                  


Q ss_pred             --------HHHHHHHHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         220 --------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                              ..+++.+|+...+.. |+++.++++.|..+..+.+
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~-Rps~~~ll~~L~~l~~~~k  267 (268)
T 3sxs_A          226 RPHLASDTIYQIMYSCWHELPEK-RPTFQQLLSSIEPLREKDK  267 (268)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSGGG-SCCHHHHHHHHGGGCC---
T ss_pred             CCCcChHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHhhhccC
Confidence                    557888888866665 6888999999988876543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=7.9e-35  Score=241.50  Aligned_cols=221  Identities=18%  Similarity=0.192  Sum_probs=165.6

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||+|++....     .......+.+.+|..+++.++||||+     +.+..
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~   79 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI-----VVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ   79 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC
Confidence            45688999999999999999998  48999999864321     11112245678899999999999999     33322


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence            2222       4555555432   35888999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      .....             +..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....++.+.   +
T Consensus       157 ~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p  223 (318)
T 1fot_A          157 PDVTY-------------TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP  223 (318)
T ss_dssp             SSCBC-------------CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC
T ss_pred             CCccc-------------cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            33210             11122223333333  457889999999999999999998875   455666666543   3


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++++|...++..|..
T Consensus       224 ~~~~~~~~~li~~lL~~dp~~R~~  247 (318)
T 1fot_A          224 PFFNEDVKDLLSRLITRDLSQRLG  247 (318)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCC
Confidence            334577899999999999999874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1e-34  Score=252.06  Aligned_cols=220  Identities=16%  Similarity=0.198  Sum_probs=159.6

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDD   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~   85 (260)
                      ++...+.|++.+.||+|+||.||+|++. +..||||.+.....         ..+.+.+|+.++++++||||+    ++.
T Consensus       183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~iv~l~~~~~  253 (454)
T 1qcf_A          183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---------SVEAFLAEANVMKTLQHDKLVKLHAVVT  253 (454)
T ss_dssp             SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc---------cHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence            3455667889999999999999999995 78899998653221         146799999999999999999    332


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       254 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  332 (454)
T 1qcf_A          254 KEPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR  332 (454)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred             CCccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence            222222       56666665432 2357888899999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      ...........         ...+...+.+|+..  ..++.++|+||||++++++++ |..|+.                
T Consensus       333 ~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~  403 (454)
T 1qcf_A          333 VIEDNEYTARE---------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR  403 (454)
T ss_dssp             GBCCHHHHTTC---------SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC
T ss_pred             EcCCCceeccC---------CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            65432111000         00011112233333  558899999999999999999 766542                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                +.+++.+|+...+.. ||++.++++.|+++.
T Consensus       404 ~~~~~~~~~~l~~li~~cl~~dp~~-RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          404 MPRPENCPEELYNIMMRCWKNRPEE-RPTFEYIQSVLDDFY  443 (454)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHTSS
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhH-CcCHHHHHHHHHHHH
Confidence                      445666777655554 567777777776653

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-34  Score=239.26  Aligned_cols=189  Identities=13%  Similarity=0.165  Sum_probs=140.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      ..++.|++.+.||+|+||.||+|++.  ++.||||++......       ...+.+.+|++++++++||||+ +++    
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   78 (319)
T 4euu_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-------RPVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (319)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-------SCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-------chHHHHHHHHHHHHhcCCCCcceEEEEeec
Confidence            34567899999999999999999995  899999986432211       1135678999999999999999 322    


Q ss_pred             CCchh--h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE----ccCCcEEEE
Q psy7935          86 VQKSA--I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL----SSDHHLVMI  152 (260)
Q Consensus        86 ~~~~~--~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill----~~~~~~kl~  152 (260)
                      .....  +       ++|.+++........+++..++.++.|++.||+|||++||+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEc
Confidence            22222  2       4566666544322338999999999999999999999999999999999999    778889999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCccc----------cccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT----------LQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||++..........           ...+...+.+|+.          ...++.++|+||+|++++++++|..|+.
T Consensus       159 Dfg~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  224 (319)
T 4euu_A          159 DFGAARELEDDEQFV-----------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (319)
T ss_dssp             CCTTCEECCTTCCBC-----------CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEE
T ss_pred             cCCCceecCCCCcee-----------ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999997664432211           0111112223322          2467889999999999999999988864

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.5e-34  Score=234.21  Aligned_cols=219  Identities=14%  Similarity=0.190  Sum_probs=160.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ...+.|++.+.||+|+||.||+|++ .+++||+|++.....         ..+.+.+|++++++++||||+ ++    +.
T Consensus         7 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   77 (269)
T 4hcu_A            7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   77 (269)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             eChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---------CHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            3456688999999999999999999 588899998643321         135688999999999999999 22    22


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  155 (269)
T 4hcu_A           78 APICLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF  155 (269)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred             CceEEEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccc
Confidence            22222       4566666443  23588899999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc-----------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-----------------  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-----------------  219 (260)
                      ...........         ..+...+.+|+..  ..+++++|+||+|++++++++ |..|+.                 
T Consensus       156 ~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~  226 (269)
T 4hcu_A          156 VLDDQYTSSTG---------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL  226 (269)
T ss_dssp             BCCHHHHSTTS---------TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC
T ss_pred             ccccccccccC---------cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccC
Confidence            54332111000         0001112233333  457889999999999999998 665532                 


Q ss_pred             ---------HHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         220 ---------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       220 ---------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                               ..+++.+|+...+.. |+++.++++.|.++..+
T Consensus       227 ~~~~~~~~~~~~li~~~l~~~p~~-Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          227 YKPRLASTHVYQIMNHCWRERPED-RPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHC
T ss_pred             CCCCcCCHHHHHHHHHHccCCccc-CcCHHHHHHHHHHHHHc
Confidence                     446777777766655 67788888888877654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.6e-34  Score=238.97  Aligned_cols=191  Identities=20%  Similarity=0.213  Sum_probs=140.1

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+...+.|++++.||+|+||.||+|++ .|+.||+|++.....      .......+.+|++++++++||||+ +++   
T Consensus        16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   89 (311)
T 3niz_A           16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE------DEGIPSTAIREISLLKELHHPNIVSLIDVIH   89 (311)
T ss_dssp             EECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc------cchhhHHHHHHHHHHHHcCCCCEeeeeeEEc
Confidence            445567799999999999999999999 588999998643321      111246788999999999999999 222   


Q ss_pred             -CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 -VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 -~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                       ....++      +++.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        90 ~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           90 SERCLTLVFEFMEKDLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR  167 (311)
T ss_dssp             CSSCEEEEEECCSEEHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cCCEEEEEEcCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence             222222      4444444332  2348899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ..........          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       168 ~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  221 (311)
T 3niz_A          168 AFGIPVRSYT----------HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP  221 (311)
T ss_dssp             ETTSCCC-------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ecCCCccccc----------CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCC
Confidence            6543321110          01112223334433   347889999999999999999988764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.5e-34  Score=244.61  Aligned_cols=227  Identities=17%  Similarity=0.208  Sum_probs=159.6

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhh-hcccCCCCeE-----EeC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRG-LMKCRMADIC-----LDD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~-l~~~~h~~i~-----~~~   85 (260)
                      ..+.|++++.||+|+||.||+|++.  ++.||+|++........     .....+.+|..+ ++.++||||+     +.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-----~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-----KEEKHIMSERNVLLKNVKHPFLVGLHFSFQT  110 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEEEC
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-----HHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe
Confidence            3456899999999999999999984  78899998765433211     123456677776 5778999999     333


Q ss_pred             CCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ....  +.+++|+.+..+      ...+++..++.++.|++.||+|||++||+||||||+|||++.++++||+|||+++.
T Consensus       111 ~~~~--~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          111 ADKL--YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             SSEE--EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             CCEE--EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            3332  234444444332      23578889999999999999999999999999999999999999999999999975


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---  231 (260)
                      ........          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.++...   
T Consensus       189 ~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~  258 (373)
T 2r5t_A          189 NIEHNSTT----------STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL  258 (373)
T ss_dssp             GBCCCCCC----------CSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCC
T ss_pred             cccCCCcc----------ccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCC
Confidence            43222111          111222223344433  457889999999999999999998876   566667766643   


Q ss_pred             cccCCccHHHHHHHHHHhcccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      +...++.+.+++++|...++..|...
T Consensus       259 ~~~~~~~~~~li~~lL~~dp~~R~~~  284 (373)
T 2r5t_A          259 KPNITNSARHLLEGLLQKDRTKRLGA  284 (373)
T ss_dssp             CSSSCHHHHHHHHHHTCSSGGGSTTT
T ss_pred             CCCCCHHHHHHHHHHcccCHHhCCCC
Confidence            33446778999999999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.6e-34  Score=242.23  Aligned_cols=225  Identities=16%  Similarity=0.230  Sum_probs=164.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~   86 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||+|++........     .....+.+|..++.++ +||||+     +.+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD-----EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSH-----HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcch-----HHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC
Confidence            456889999999999999999984  88999998765433221     2245688899999887 899999     2232


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++..   ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~  159 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  159 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBC
T ss_pred             CEEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEecccccc
Confidence            22222       344444433   23588999999999999999999999999999999999999999999999999975


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------------HHHHHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------------FRDMFN  225 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------------~~~~~~  225 (260)
                      ........          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.            ...+.+
T Consensus       160 ~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~  229 (345)
T 3a8x_A          160 GLRPGDTT----------STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ  229 (345)
T ss_dssp             SCCTTCCB----------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHH
T ss_pred             ccCCCCcc----------cccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHH
Confidence            43222111          111222223344433  457889999999999999999998874            223444


Q ss_pred             HHHhhc---cccCCccHHHHHHHHHHhcccccccc
Q psy7935         226 WILSSY---RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       226 ~~~~~~---~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      .+....   +...++.+.+++++|...++..|...
T Consensus       230 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          230 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            444432   23345677899999999999999764

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-34  Score=240.46  Aligned_cols=219  Identities=15%  Similarity=0.134  Sum_probs=160.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.+|+|.+....         .....+.+|+.+++.++||||+ +++    ..
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   74 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------TDQVLVKKEISILNIARHRNILHLHESFESME   74 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---------ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence            356888999999999999999984  8899999864221         1245688999999999999999 322    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEeecccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~  158 (260)
                      ..++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.  ++.+||+|||++.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~  152 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR  152 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCe
Confidence            2222       4666666443  235889999999999999999999999999999999999997  7899999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (260)
                      ........            ....+.+.| +|+..  ..+++++|+||+|++++++++|..|+.   ..+.++.+..+..
T Consensus       153 ~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  220 (321)
T 1tki_A          153 QLKPGDNF------------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY  220 (321)
T ss_dssp             ECCTTCEE------------EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred             ECCCCCcc------------ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCC
Confidence            65433211            112233333 44433  447889999999999999999988875   4555555554432


Q ss_pred             c-------cCCccHHHHHHHHHHhccccccc
Q psy7935         233 R-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .       ..++.+.+++.+|...++..|..
T Consensus       221 ~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt  251 (321)
T 1tki_A          221 TFDEEAFKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCChhhhccCCHHHHHHHHHHcCCChhHCcC
Confidence            2       22455677777777777777754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.8e-34  Score=243.42  Aligned_cols=221  Identities=16%  Similarity=0.133  Sum_probs=161.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|.+.  |+.||+|++..+...      ....+.+.+|+.++++++||||+ +    .+...
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC------HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            45889999999999999999984  899999987654322      11245788999999999999999 3    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC---CcEEEEeecccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD---HHLVMIDFGLSQ  158 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~---~~~kl~DFg~~~  158 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.+   +.+||+|||++.
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            222       4555555433   358899999999999999999999999999999999999864   469999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR  233 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  233 (260)
                      .........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++...+..+...
T Consensus       180 ~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  248 (362)
T 2bdw_A          180 EVNDSEAWH-----------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD  248 (362)
T ss_dssp             CCTTCCSCC-----------CSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             EecCCcccc-----------cCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            654332110           11122223333333  357889999999999999999988865   45555555554321


Q ss_pred             -------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ..++.+.+++.+|...++..|..
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  278 (362)
T 2bdw_A          249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRIT  278 (362)
T ss_dssp             CCTTGGGGSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcC
Confidence                   22456788888888888888764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=4.4e-34  Score=237.80  Aligned_cols=220  Identities=15%  Similarity=0.178  Sum_probs=158.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~   86 (260)
                      ...+.|++.+.||+|+||.||+|++.     +..||||.+....       .....+.+.+|+.++++++||||+ +++.
T Consensus        46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~  118 (325)
T 3kul_A           46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-------TERQRRDFLSEASIMGQFDHPNIIRLEGV  118 (325)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-------CHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence            34566888999999999999999983     3459999864221       111246789999999999999999 3322


Q ss_pred             ----Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          87 ----QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        87 ----~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                          ...++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  196 (325)
T 3kul_A          119 VTRGRLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFG  196 (325)
T ss_dssp             ECGGGCCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred             EEeCCccEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCC
Confidence                11122       4666666433  2358899999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc-------------
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV-------------  218 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~-------------  218 (260)
                      ++.............        ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+             
T Consensus       197 ~a~~~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  268 (325)
T 3kul_A          197 LSRVLEDDPDAAYTT--------TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE  268 (325)
T ss_dssp             SCEECC----CCEEC--------C---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH
T ss_pred             cccccccCccceeec--------cCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            998764432211000        0011112 2333333  457889999999999999998 76653             


Q ss_pred             -------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 -------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 -------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   .+.+++.+|+...+.. |+++.++++.|..+.
T Consensus       269 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~eil~~L~~l~  312 (325)
T 3kul_A          269 EGYRLPAPMGCPHALHQLMLDCWHKDRAQ-RPRFSQIVSVLDALI  312 (325)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCcCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                         2557778888766665 678888888887664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4e-34  Score=247.09  Aligned_cols=222  Identities=14%  Similarity=0.101  Sum_probs=161.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|.+  +|+.+|+|++..+...      ....+.+.+|+.++++++||||+ +    .+...
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~------~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   84 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS------ARDHQKLEREARICRLLKHPNIVRLHDSISEEGH   84 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH------HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC------HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE
Confidence            4588899999999999999998  4899999987654321      12246789999999999999999 2    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeecccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQ  158 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~  158 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+|||++.
T Consensus        85 ~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~  161 (444)
T 3soa_A           85 HYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI  161 (444)
T ss_dssp             EEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred             EEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence            222       3555554433   35899999999999999999999999999999999999984   6889999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR  233 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  233 (260)
                      .........          ....+...+.+|+..  ..+++++|+||+|++++++++|..|+.   ..++...+..+...
T Consensus       162 ~~~~~~~~~----------~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  231 (444)
T 3soa_A          162 EVEGEQQAW----------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD  231 (444)
T ss_dssp             CCCTTCCBC----------CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC
T ss_pred             EecCCCcee----------ecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCC
Confidence            654432111          011122223344433  357889999999999999999988865   55566666554322


Q ss_pred             -------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ..++.+.+++.+|...++..|..
T Consensus       232 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  261 (444)
T 3soa_A          232 FPSPEWDTVTPEAKDLINKMLTINPSKRIT  261 (444)
T ss_dssp             CCTTTTTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCccccccCCHHHHHHHHHHcCCChhHCCC
Confidence                   22456778888888888887764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.9e-34  Score=234.26  Aligned_cols=224  Identities=18%  Similarity=0.259  Sum_probs=151.9

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ...+...+.|++.+.||+|+||.||+|++.+ .||+|++......      ....+.+.+|+.++++++||||+ +++  
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   89 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPT------PQQLQAFKNEVGVLRKTRHVNILLFMGYS   89 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCC------HHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCC------HHHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence            4556778889999999999999999998765 4999986443211      12246789999999999999999 322  


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        90 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~  167 (289)
T 3og7_A           90 TAPQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA  167 (289)
T ss_dssp             CSSSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred             cCCccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceec
Confidence             222222       5566666433  345888999999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc-------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~-------------  219 (260)
                      ..........        ......+...+.+|+..     ..++.++|+||+|++++++++|..|+.             
T Consensus       168 ~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  239 (289)
T 3og7_A          168 TEKSRWSGSH--------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG  239 (289)
T ss_dssp             ------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHH
T ss_pred             cccccccccc--------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhc
Confidence            7554321110        00011111222233322     346779999999999999999887653             


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                        +.+++.+|+...+.. |+++.++++.|.++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~ell~~L~~l~  287 (289)
T 3og7_A          240 RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE-RPSFPRILAEIEELA  287 (289)
T ss_dssp             HTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHTT
T ss_pred             ccccCcchhhccccCCHHHHHHHHHHccCChhh-CCCHHHHHHHHHHHh
Confidence                              345566666644444 456666666666543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.9e-36  Score=249.89  Aligned_cols=187  Identities=17%  Similarity=0.144  Sum_probs=138.9

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~   86 (260)
                      ..+.|.+.+.||+|+||.||+|++  +++.||+|++....     .........+.+|+.+++.++||||+ +    .+.
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~   81 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP   81 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            345688999999999999999998  58999999864321     11111235688999999999999999 2    222


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++      ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus        82 ~~~~lv~E~~~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           82 TDIVMVIEYAGGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             SEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             CEEEEEEECCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            22222      5566655433   35889999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           +..+...+.+|+..   ...++++|+||+|++++++++|..|++
T Consensus       159 ~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~  209 (336)
T 3h4j_B          159 TDGNFLK-----------TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD  209 (336)
T ss_dssp             TTSBTTC-----------CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSB
T ss_pred             cCCcccc-----------cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCC
Confidence            4432111           11111222333333   223688999999999999999987754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=6.4e-34  Score=233.23  Aligned_cols=223  Identities=18%  Similarity=0.209  Sum_probs=157.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +++.||+|++.......      .....+.+|+.++++++||||+ +++    ...
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE------GVPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST------THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC------CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCE
Confidence            3578899999999999999998  48899999875443221      1245688999999999999999 322    222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      +++.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~e~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           76 LTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             EEEEEecCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            222      3333333222  24588999999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhcc---
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYR---  232 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~---  232 (260)
                      ......          ...++..+.+|+..   ..++.++|+||+|+++++++++..|+.    ..+.+..+.....   
T Consensus       154 ~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~  223 (292)
T 3o0g_A          154 PVRCYS----------AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT  223 (292)
T ss_dssp             CCSCCC----------SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccc----------CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence            321110          01112223333333   237889999999999999999888743    3444444433211   


Q ss_pred             -----------------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 -----------------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -----------------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                   ...++.+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  276 (292)
T 3o0g_A          224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS  276 (292)
T ss_dssp             TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC
Confidence                                         012345578888888888888764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.4e-34  Score=251.53  Aligned_cols=188  Identities=20%  Similarity=0.226  Sum_probs=137.0

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~   88 (260)
                      .+.|++++.||+|+||.||+|.+  +|+.||||++....      ......+.+.+|+.+++.++||||+ +++   ...
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~  134 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK  134 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG------GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc------cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC
Confidence            35688999999999999999998  48999999865321      1222356788999999999999999 222   111


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ..++.+++|+.+...   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       135 ~~~~~~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          135 TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             STTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             ccccCCeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence                 112445555544321   224788999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......           ....++..+.+|+.+  ..++.++|+||+|++++++++|+.|+.
T Consensus       215 ~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~  264 (464)
T 3ttj_A          215 GTSFMM-----------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  264 (464)
T ss_dssp             --CCCC---------------CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             CCCccc-----------CCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence            432111           111122223333333  457889999999999999999988876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=7.1e-35  Score=248.22  Aligned_cols=200  Identities=18%  Similarity=0.227  Sum_probs=132.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDD----   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~----   85 (260)
                      ..+.|++.+.||+|+||.||+|.+.  |+.||||++... ..     .......+.+|+.++..+. ||||+ +++    
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~-----~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~   80 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQ-----NSTDAQRTFREIMILTELSGHENIVNLLNVLRA   80 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---C-----CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-cc-----ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec
Confidence            3456889999999999999999984  899999986432 11     1223467889999999997 99999 222    


Q ss_pred             CCchhhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .....++.+++|+.+...    ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A           81 DNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             TTSSCEEEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             CCCCEEEEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            222223334444432100    2247888889999999999999999999999999999999999999999999997654


Q ss_pred             cccccccc----------ccc-cccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVD----------LYV-LKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d----------~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ........          .+. .........++..+.+|+.+   ..++.++|+||+|++++++++|..|+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  232 (388)
T 3oz6_A          161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP  232 (388)
T ss_dssp             SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence            32111100          000 01111222333334455544   357899999999999999999988765

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.8e-34  Score=242.45  Aligned_cols=226  Identities=16%  Similarity=0.161  Sum_probs=166.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~   85 (260)
                      ..+.|++++.||+|+||.||+|++.  |+.||+|++.....     ......+.+.+|..++..+ .||+|+     +.+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc
Confidence            3456899999999999999999984  78999998653221     1112245678899999887 799998     333


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  169 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence            233222       3455554432   358899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc--
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY--  231 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~--  231 (260)
                      .........          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+....  
T Consensus       170 ~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~  239 (353)
T 2i0e_A          170 ENIWDGVTT----------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA  239 (353)
T ss_dssp             CCCCTTCCB----------CCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             ccccCCccc----------ccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCC
Confidence            533221110          111222223344433  457889999999999999999998876   566667766643  


Q ss_pred             -cccCCccHHHHHHHHHHhcccccccc
Q psy7935         232 -RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       232 -~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                       +...++.+.+++.+|...++..|..+
T Consensus       240 ~p~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          240 YPKSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence             23345778899999999999999853

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=4.4e-34  Score=241.82  Aligned_cols=220  Identities=15%  Similarity=0.168  Sum_probs=157.9

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ..+.|++.+.||+|+||.||+|++.         +..||||++....       .....+.+.+|+.+++++ +||||+ 
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpnIv~  151 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNIIN  151 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-------BHHHHHHHHHHHHHHHHSCCCTTBCC
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-------CHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            3456888999999999999999973         3469999853221       111246789999999999 899999 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCC
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT  138 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp  138 (260)
                      +++    ....++       ++|.+++.....             ...+++..++.++.|++.||+|||++||+||||||
T Consensus       152 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp  231 (370)
T 2psq_A          152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAA  231 (370)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCG
T ss_pred             EEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccch
Confidence            222    222222       577777654321             23478889999999999999999999999999999


Q ss_pred             CcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-c
Q psy7935         139 SNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-E  214 (260)
Q Consensus       139 ~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~  214 (260)
                      +|||++.++.+||+|||+++............         ...+.+ +.+|+..  ..++.++|+||+|++++++++ |
T Consensus       232 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g  302 (370)
T 2psq_A          232 RNVLVTENNVMKIADFGLARDINNIDYYKKTT---------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLG  302 (370)
T ss_dssp             GGEEECTTCCEEECCCSSCEETTCCCTTCTTT---------TTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             hhEEECCCCCEEEccccCCcccCcccceeccc---------CCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999997654332111100         001111 2233333  457889999999999999998 6


Q ss_pred             cccc--------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         215 DKAV--------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       215 ~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      ..|+                          .+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       303 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rpt~~ell~~L~~il  363 (370)
T 2psq_A          303 GSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ-RPTFKQLVEDLDRIL  363 (370)
T ss_dssp             CCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence            5443                          2456777777766665 578888888877653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.7e-34  Score=234.80  Aligned_cols=195  Identities=18%  Similarity=0.207  Sum_probs=141.0

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      .++....+.|++.+.||+|+||.||+|++  +++.||+|++........ .......+.+.+|+.++++++||||+ +++
T Consensus        12 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   90 (287)
T 4f0f_A           12 RLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGE-TEMIEKFQEFQREVFIMSNLNHPNIVKLYG   90 (287)
T ss_dssp             CCCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCC-HHHHCCSHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred             hhhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccc-hhHHHHHHHHHHHHHHHHhCCCCCchhhhe
Confidence            34455567799999999999999999998  488999998654332211 11111125789999999999999999 333


Q ss_pred             CCc--hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCc-----E
Q psy7935          86 VQK--SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHH-----L  149 (260)
Q Consensus        86 ~~~--~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~-----~  149 (260)
                      ...  ..+       ++|.+++...  ...+++..++.++.|++.||+|||++|  |+||||||+|||++.++.     +
T Consensus        91 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           91 LMHNPPRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             EETTTTEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             eecCCCeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeE
Confidence            211  112       4555555332  235889999999999999999999999  999999999999988776     9


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||+|||++........             ...+...+.+|+..    ..+++++|+||+|++++++++|..|+.
T Consensus       169 kl~Dfg~~~~~~~~~~-------------~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~  229 (287)
T 4f0f_A          169 KVADFGLSQQSVHSVS-------------GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD  229 (287)
T ss_dssp             EECCCTTCBCCSSCEE-------------CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             EeCCCCcccccccccc-------------ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCc
Confidence            9999999874433211             11111122233332    446789999999999999999987753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2e-34  Score=241.47  Aligned_cols=226  Identities=18%  Similarity=0.182  Sum_probs=165.1

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~   85 (260)
                      ..+.|++.+.||+|+||.||+|++.  |+.||+|++.....     ........+..|..++..+ +||||+     +.+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~   89 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT   89 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe
Confidence            3456889999999999999999984  88999998643211     1111235677888888876 899999     333


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK  166 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence            333222       4455555432   358889999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      .........          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++...+..+.+ 
T Consensus       167 ~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~  236 (345)
T 1xjd_A          167 ENMLGDAKT----------NTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPF  236 (345)
T ss_dssp             CCCCTTCCB----------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             hcccCCCcc----------cCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCC
Confidence            543221111          111222223344433  457889999999999999999998876   5566666665433 


Q ss_pred             --ccCCccHHHHHHHHHHhcccccccc
Q psy7935         233 --RQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       233 --~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                        ...++.+.+++.+|...++..|...
T Consensus       237 ~p~~~s~~~~~li~~lL~~dp~~R~~~  263 (345)
T 1xjd_A          237 YPRWLEKEAKDLLVKLFVREPEKRLGV  263 (345)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             CCcccCHHHHHHHHHHhcCCHhHcCCC
Confidence              3345778899999999999988753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.4e-33  Score=234.30  Aligned_cols=217  Identities=18%  Similarity=0.235  Sum_probs=160.3

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~~   89 (260)
                      +.|+..+.||+|+||.||+|++. ++.||||.+.....        ...+.+.+|+.+++.++||||+ +++.    ...
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  110 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS--------QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM  110 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS--------SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh--------HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence            45888999999999999999985 88999997543211        1246789999999999999999 3322    222


Q ss_pred             hh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++       ++|.+++..... ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            22       455555544321 2348889999999999999999999999999999999999999999999999997644


Q ss_pred             ccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccccc-------------------
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------------------  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------------------  219 (260)
                      .......         .....+.+ +.+|+..  ..++.++|+||+|++++++++|+.|+.                   
T Consensus       191 ~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~  261 (321)
T 2qkw_B          191 ELDQTHL---------STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN  261 (321)
T ss_dssp             SSSCCCC---------BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred             ccccccc---------ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence            3221110         01111223 3334433  567899999999999999999875431                   


Q ss_pred             -----------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -----------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -----------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                             +.+++.+|+...+.. |+++.++++.|+.+.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~ell~~L~~~l  314 (321)
T 2qkw_B          262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSED-RPSMGDVLWKLEYAL  314 (321)
T ss_dssp             TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHHh
Confidence                                   346677888866666 689999999988664

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=240.62  Aligned_cols=222  Identities=16%  Similarity=0.101  Sum_probs=155.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC------
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD------   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~------   85 (260)
                      ...+.|++.+.||+|+||.||+|+++++.||||++....     .    .......|+..+..++||||+ +++      
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~   80 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----R----QNFINEKNIYRVPLMEHDNIARFIVGDERVT   80 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-----H----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred             cChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-----h----hhHHHHHHHHHHHhccCcchhhheecccccc
Confidence            345668999999999999999999999999999864221     0    111223444556678999999 432      


Q ss_pred             C-Cchh--h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC---------CceecCCCCCcEEEccC
Q psy7935          86 V-QKSA--I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN---------NIIHGDLTTSNMILSSD  146 (260)
Q Consensus        86 ~-~~~~--~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~---------~i~H~dlkp~Nill~~~  146 (260)
                      . ....  +       ++|.+++....    .++..++.++.|++.||+|||++         ||+||||||+|||++.+
T Consensus        81 ~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~  156 (336)
T 3g2f_A           81 ADGRMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND  156 (336)
T ss_dssp             TTSCEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred             cCCCceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence            1 1111  1       46666664443    57788889999999999999999         99999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---------ccccccceeEeecceeeeecccccc
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---------QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      +.+||+|||++.............  .........++..+.+|+..         ..+++++|+||+|++++++++|..|
T Consensus       157 ~~~kL~DFG~a~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p  234 (336)
T 3g2f_A          157 GTCVISDFGLSMRLTGNRLVRPGE--EDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTD  234 (336)
T ss_dssp             SCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred             CcEEEeeccceeecccccccCccc--cccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCc
Confidence            999999999997664332110000  00000011111222233322         3566789999999999999988654


Q ss_pred             c---------------------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHH
Q psy7935         218 V---------------------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTF  246 (260)
Q Consensus       218 ~---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l  246 (260)
                      +                                                   .+.+++.+|+...+.. |+++.++++.|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~e~l~~L  313 (336)
T 3g2f_A          235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEA-RLTAQXAEERM  313 (336)
T ss_dssp             GSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGG-SCCHHHHHHHH
T ss_pred             CCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhh-CcchHHHHHHH
Confidence            3                                                   3678899999977776 67999999998


Q ss_pred             HHhc
Q psy7935         247 AEVE  250 (260)
Q Consensus       247 ~~~~  250 (260)
                      .++.
T Consensus       314 ~~ll  317 (336)
T 3g2f_A          314 AELM  317 (336)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=5.1e-34  Score=247.33  Aligned_cols=212  Identities=19%  Similarity=0.276  Sum_probs=158.6

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ...+.|++.+.||+|+||.||+|.++|+.||||++....          ..+.+.+|+.++++++||||+ +++    ..
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  259 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK  259 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC
Confidence            344568889999999999999999999999999864321          135689999999999999999 322    22


Q ss_pred             -chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 -KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 -~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                       ..++       ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus       260 ~~~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          260 GGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE  338 (450)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CceEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccc
Confidence             2222       56767665432 23468889999999999999999999999999999999999999999999999875


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc-----------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV-----------------  218 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~-----------------  218 (260)
                      ........              .+...| +|+..  ..++.++|+||||++++++++ |..|+                 
T Consensus       339 ~~~~~~~~--------------~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~  404 (450)
T 1k9a_A          339 ASSTQDTG--------------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK  404 (450)
T ss_dssp             CC--------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC
T ss_pred             ccccccCC--------------CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            43221110              111223 33333  457889999999999999998 66543                 


Q ss_pred             ---------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 ---------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 ---------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                               .+.+++.+|+...+.. |+++.++++.|+++.
T Consensus       405 ~~~p~~~~~~l~~li~~cl~~dp~~-Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          405 MDAPDGCPPAVYDVMKNCWHLDAAT-RPTFLQLREQLEHIR  444 (450)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHHH
Confidence                     2557777888766665 678888888877664

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=2.8e-34  Score=236.23  Aligned_cols=191  Identities=17%  Similarity=0.187  Sum_probs=137.1

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L   83 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~   83 (260)
                      .....++|++.+.||+|+||.||+|++      +++.||+|++.....       ......+.+|+.++++++||||+ +
T Consensus        16 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~   88 (302)
T 4e5w_A           16 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-------GNHIADLKKEIEILRNLYHENIVKY   88 (302)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------CCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-------chhHHHHHHHHHHHHhCCCCCeeee
Confidence            344456789999999999999999994      488999998643321       11246788999999999999999 2


Q ss_pred             ----eCCCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          84 ----DDVQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        84 ----~~~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                          .+.....+         ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+|
T Consensus        89 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~k  166 (302)
T 4e5w_A           89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK  166 (302)
T ss_dssp             EEEEEC---CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred             eeEEecCCCceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEE
Confidence                22211212         4666666332  23588899999999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      |+|||++............       .....++..+.+|+..  ..++.++|+||+|++++++++|..|
T Consensus       167 l~Dfg~~~~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (302)
T 4e5w_A          167 IGDFGLTKAIETDKEYYTV-------KDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDS  228 (302)
T ss_dssp             ECCCTTCEECCTTCCEEEC-------CCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred             ECcccccccccCCCcceec-------cCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCC
Confidence            9999999766543211000       0001111112333333  4577899999999999999997554

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=233.68  Aligned_cols=213  Identities=18%  Similarity=0.243  Sum_probs=156.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCCchhh-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQKSAI-   91 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~~~~~-   91 (260)
                      ..+.|++.+.||+|+||.||+|++.++.||+|.+...     .     ..+.+.+|+.++++++||||+ +++...... 
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-----~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   75 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE-----S-----ERKAFIVELRQLSRVNHPNIVKLYGACLNPVC   75 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST-----T-----HHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTE
T ss_pred             CHhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh-----h-----HHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcE
Confidence            3456888999999999999999999999999985321     1     246789999999999999999 444322222 


Q ss_pred             --------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh---CCceecCCCCCcEEEccCCc-EEEEeeccccc
Q psy7935          92 --------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS---NNIIHGDLTTSNMILSSDHH-LVMIDFGLSQI  159 (260)
Q Consensus        92 --------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~-~kl~DFg~~~~  159 (260)
                              ++|.+++........++...++.++.|++.||+|||+   +||+||||||+|||++.++. +||+|||++..
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~  155 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD  155 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence                    4666666554323357888899999999999999999   89999999999999998776 79999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------------------  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------------------  219 (260)
                      .......             ..+...+.+|+..  ..++.++|+||+|++++++++|..|+.                  
T Consensus       156 ~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  222 (307)
T 2eva_A          156 IQTHMTN-------------NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR  222 (307)
T ss_dssp             ----------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC
T ss_pred             ccccccc-------------CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC
Confidence            4332110             0111112233322  457889999999999999999887643                  


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                ..+++.+|+...+.. |+++.++++.|..+.
T Consensus       223 ~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~~~  262 (307)
T 2eva_A          223 PPLIKNLPKPIESLMTRCWSKDPSQ-RPSMEEIVKIMTHLM  262 (307)
T ss_dssp             CCCBTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHG
T ss_pred             CCcccccCHHHHHHHHHHhcCChhh-CcCHHHHHHHHHHHH
Confidence                      356788888866665 678888888887764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3.4e-34  Score=249.04  Aligned_cols=190  Identities=19%  Similarity=0.236  Sum_probs=129.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC-----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ-----   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~-----   87 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++... .     ......+.+.+|+.++++++||||+ +++..     
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~-----~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  126 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-F-----EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDV  126 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECST-T-----SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-h-----cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCc
Confidence            56899999999999999999984  899999986432 1     1222356789999999999999999 33221     


Q ss_pred             ----chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          88 ----KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ----~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                          ..++      ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       127 ~~~~~~~lv~e~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla  203 (458)
T 3rp9_A          127 EKFDELYVVLEIADSDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA  203 (458)
T ss_dssp             TTCCCEEEEECCCSEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ccCceEEEEEeccccchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccc
Confidence                1111      5555555443   35899999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccc-----------------ccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccc
Q psy7935         158 QIKVSTEDKAVDLY-----------------VLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       158 ~~~~~~~~~~~d~~-----------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      +.............                 .......+..++..+.+|+.+   ..++.++|+||+||++++++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            87654322111000                 000112222333334455533   4588999999999999999983

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=6.6e-34  Score=234.63  Aligned_cols=218  Identities=18%  Similarity=0.246  Sum_probs=158.1

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCchhh---
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQKSAI---   91 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~~~~---   91 (260)
                      ..+.||+|+||.||+|+++++.||+|.+......    ......+.+.+|+.++++++||||+ ++    +....++   
T Consensus        35 ~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           35 GGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI----TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TCCEEEECSSEEEEEEESSSCEEEEEEECCCTTS----CTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             cCCccccCCCeEEEEEEECCceEEEEEEecccCc----chHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEE
Confidence            3489999999999999999999999986433211    1112356789999999999999999 22    2222222   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          ++|.+++........+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+|||++..........
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  190 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV  190 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc
Confidence                5666666543323458899999999999999999999999999999999999999999999999987654322111


Q ss_pred             ccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---------------------------
Q psy7935         168 VDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---------------------------  219 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---------------------------  219 (260)
                      ..    .    ...+...+.+|+.. +.++.++|+||+|++++++++|..|+.                           
T Consensus       191 ~~----~----~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (307)
T 2nru_A          191 MT----S----RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYID  262 (307)
T ss_dssp             EC----S----SCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSC
T ss_pred             cc----c----ccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcc
Confidence            00    0    01111112233322 457889999999999999999876643                           


Q ss_pred             -------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   +.+++.+|+...+.. ||++.++++.|+++.
T Consensus       263 ~~~~~~~~~~~~~l~~li~~cl~~~p~~-Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          263 KKMNDADSTSVEAMYSVASQCLHEKKNK-RPDIKKVQQLLQEMT  305 (307)
T ss_dssp             SSCSCCCHHHHHHHHHHHHHHTCSSTTT-SCCHHHHHHHHHHHC
T ss_pred             ccccccchHHHHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHHh
Confidence                         235777888865555 678888888888765

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.1e-34  Score=237.04  Aligned_cols=226  Identities=14%  Similarity=0.140  Sum_probs=160.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||+|++.........  .....+.+.+|+.++++++||||+ +    .+..
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   87 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--RGVSREDIEREVSILKEIQHPNVITLHEVYENKT   87 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            355888999999999999999984  899999987654432111  111246789999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----cEEEEeecc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----HLVMIDFGL  156 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----~~kl~DFg~  156 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.++    .+||+|||+
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           88 DVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             EEEEEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             EEEEEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            2222       5666666543   3589999999999999999999999999999999999999877    899999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      +..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....
T Consensus       165 a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~  233 (326)
T 2y0a_A          165 AHKIDFGNEFK-----------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  233 (326)
T ss_dssp             CEECCTTSCCC-----------CCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTC
T ss_pred             CeECCCCCccc-----------cccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcC
Confidence            97664332111           11112222333333  457889999999999999999998874   333444333321


Q ss_pred             c-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         232 R-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .       ...++.+.+++.+|...++..|..
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  265 (326)
T 2y0a_A          234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT  265 (326)
T ss_dssp             CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCcCccccccCCHHHHHHHHHHccCChhhCCC
Confidence            1       122445567777777777776653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=5.2e-34  Score=233.36  Aligned_cols=223  Identities=17%  Similarity=0.183  Sum_probs=157.2

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~~   89 (260)
                      +.|++++.||+|+||.||+|++. |+.||+|.+......      ......+.+|+.++++++||||+ +    .+....
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED------EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG------GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc------cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeE
Confidence            35788999999999999999985 889999986543211      11135678999999999999999 2    222222


Q ss_pred             hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus        76 ~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             EEEEECCSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             EEEEEecCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            22      4555555433  235788899999999999999999999999999999999999999999999998765432


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc------
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY------  231 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~------  231 (260)
                      .....          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+....+....      
T Consensus       154 ~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  223 (288)
T 1ob3_A          154 VRKYT----------HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK  223 (288)
T ss_dssp             ------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccc----------cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChh
Confidence            21110          11112223334333   347889999999999999999988875   233333332210      


Q ss_pred             --------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                ....++.+.+++.+|...++..|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  274 (288)
T 1ob3_A          224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT  274 (288)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence                                      0112345568899999888888864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=4.9e-34  Score=232.69  Aligned_cols=220  Identities=15%  Similarity=0.199  Sum_probs=150.9

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E--
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L--   83 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~--   83 (260)
                      +...+.|++.+.||+|+||.||+|.+.     +..||+|.....       ......+.+.+|+.++++++||||+ +  
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   83 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-------TSDSVREKFLQEALTMRQFDHPHIVKLIG   83 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-------TSHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-------CCHHHHHHHHHHHHHHHhCCCCccceEEE
Confidence            455677999999999999999999983     346999974321       1122356789999999999999999 2  


Q ss_pred             -eCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          84 -DDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        84 -~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                       ......++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  161 (281)
T 1mp8_A           84 VITENPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG  161 (281)
T ss_dssp             EECSSSCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--
T ss_pred             EEccCccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccc
Confidence             22222222       4666666533  2358889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc------------
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD------------  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~------------  219 (260)
                      ++...........          ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.            
T Consensus       162 ~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~  231 (281)
T 1mp8_A          162 LSRYMEDSTYYKA----------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  231 (281)
T ss_dssp             ---------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH
T ss_pred             cccccCccccccc----------ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH
Confidence            9976543321110          0111122 2233333  457889999999999999986 655432            


Q ss_pred             --------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 --------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 --------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                    +.+++.+|+...+.. |+++.++++.|.++..
T Consensus       232 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          232 NGERLPMPPNCPPTLYSLMTKCWAYDPSR-RPRFTELKAQLSTILE  276 (281)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHHH
Confidence                          456777777765655 5777888887776643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.6e-34  Score=242.82  Aligned_cols=229  Identities=14%  Similarity=0.134  Sum_probs=158.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||||++.........   ....+.+.+|+.+++.++||||+ +++.  ...
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   99 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSP---GLSTEDLKREASICHMLKHPHIVELLETYSSDG   99 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSS---SCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccc---cchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            345889999999999999999984  899999986543211100   01246789999999999999999 3322  112


Q ss_pred             hhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---cEEEEeecc
Q psy7935          90 AIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---HLVMIDFGL  156 (260)
Q Consensus        90 ~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---~~kl~DFg~  156 (260)
                      .++.++||+.+..+          ...+++..+..++.|++.||+|||++||+||||||+|||++.++   .+||+|||+
T Consensus       100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            22334444443322          22478899999999999999999999999999999999998754   499999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--HHHHHHHHHhhcc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--FRDMFNWILSSYR  232 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~  232 (260)
                      +..........          ....++..+.+|+..  ..++.++|+||+|++++++++|..|+.  ..++...+..+..
T Consensus       180 a~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~  249 (351)
T 3c0i_A          180 AIQLGESGLVA----------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY  249 (351)
T ss_dssp             CEECCTTSCBC----------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCC
T ss_pred             eeEecCCCeee----------cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCC
Confidence            97664432111          011122222333333  457889999999999999999988875  3444444444322


Q ss_pred             -------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 -------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ...++.+.+++.+|...++..|..
T Consensus       250 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s  280 (351)
T 3c0i_A          250 KMNPRQWSHISESAKDLVRRMLMLDPAERIT  280 (351)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CCCccccccCCHHHHHHHHHHCCCChhHCcC
Confidence                   122455677777777777777754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.5e-34  Score=239.68  Aligned_cols=220  Identities=15%  Similarity=0.125  Sum_probs=154.4

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD----V   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~----~   86 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||||++.....          ...+.+|+.+++++ +||||+ +++    .
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   77 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----------APQLHLEYRFYKQLGSGDGIPQVYYFGPCG   77 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----------SCCHHHHHHHHHHHCSCTTSCCEEEEEEET
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----------hHHHHHHHHHHHHhhCCCCCCEEEEEEecC
Confidence            35688899999999999999997  489999998654321          13477899999999 999998 222    1


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc-----EEEEeec
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH-----LVMIDFG  155 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~-----~kl~DFg  155 (260)
                      ...++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.     +||+|||
T Consensus        78 ~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg  155 (330)
T 2izr_A           78 KYNAMVLELLGPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFA  155 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred             CccEEEEEeCCCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence            11122      4555555432  246899999999999999999999999999999999999998877     9999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--------------
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--------------  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--------------  219 (260)
                      +++............+..   .....++..+.+|+..  ..++.++|+||+|++++++++|..|+.              
T Consensus       156 ~a~~~~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i  232 (330)
T 2izr_A          156 LAKEYIDPETKKHIPYRE---HKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI  232 (330)
T ss_dssp             TCEESBCTTTCCBCCCCC---CCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHH
T ss_pred             cceeeecCCCCccccccc---cCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHH
Confidence            998765443221111100   0111222223344433  457889999999999999999987753              


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                        +.+++..|+...+.. ||++.++.+.+.++.
T Consensus       233 ~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~-RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          233 GDTKRATPIEVLCENFPEMATYLRYVRRLDFFE-KPDYDYLRKLFTDLF  280 (330)
T ss_dssp             HHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTC-CCCHHHHHHHHHHHH
T ss_pred             HhhhccCCHHHHhccChHHHHHHHHHHhCCCCC-CCCHHHHHHHHHHHH
Confidence                              234455555544443 566677776666543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=7.8e-34  Score=239.87  Aligned_cols=218  Identities=12%  Similarity=0.131  Sum_probs=156.8

Q ss_pred             cccccCcceeeccCCceeEEEEE-----E--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC---CCCeE-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTE-----Y--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR---MADIC-   82 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~-----~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~-   82 (260)
                      ..+.|.+.+.||+|+||.||+|.     +  .++.||+|++....           ...+..|+.++..+.   |+|++ 
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----------PWEFYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----------HHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----------hhHHHHHHHHHHHhhhhhhhhhhh
Confidence            34568889999999999999994     3  48999999864321           235666676666665   89988 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCc--ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc----
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQN--ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS----  145 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~----  145 (260)
                      +++    ....++       ++|.+++....  ....+++..++.++.|++.||+|||++||+||||||+|||++.    
T Consensus       132 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~  211 (365)
T 3e7e_A          132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLE  211 (365)
T ss_dssp             EEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTC
T ss_pred             hheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccC
Confidence            222    222222       56666664311  1345899999999999999999999999999999999999998    


Q ss_pred             -------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccc
Q psy7935         146 -------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       146 -------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                             ++.+||+|||+++.........        ......++..+.+|+..  ..++.++|+||+|++++++++|..
T Consensus       212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  283 (365)
T 3e7e_A          212 QDDEDDLSAGLALIDLGQSIDMKLFPKGT--------IFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTY  283 (365)
T ss_dssp             C------CTTEEECCCTTCEEGGGSCTTE--------EECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccccccCCEEEeeCchhhhhhccCCCc--------eeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence                   8999999999997553221110        01111122223333333  447899999999999999999985


Q ss_pred             cc---------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         217 AV---------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       217 ~~---------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      |+                     .+.++++.|+...+..+++++.++.+.+.+.-
T Consensus       284 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          284 MKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             CCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             ccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence            52                     26788888998777777788888777776553

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=3.9e-34  Score=238.28  Aligned_cols=218  Identities=16%  Similarity=0.278  Sum_probs=156.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--Ccc----EEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRS----VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD-   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~-   85 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.    ||+|.+....       .....+.+.+|+.++++++||||+ +++ 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   85 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRLLGI   85 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------CHHHHHHHHHHHHHCCBTTBCCEEEE
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-------CHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            3466889999999999999999983  544    4666542211       111246789999999999999999 222 


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        .....+       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~  163 (327)
T 3poz_A           86 CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EESSSEEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTH
T ss_pred             EecCCeEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcc
Confidence              222211       6777777553  23588889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc-------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-------------  219 (260)
                      ++...........         ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.             
T Consensus       164 a~~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  234 (327)
T 3poz_A          164 AKLLGAEEKEYHA---------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  234 (327)
T ss_dssp             HHHHTTTCC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             eeEccCCcccccc---------cCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHc
Confidence            9766443221110         0011122 2333333  557899999999999999999 765532             


Q ss_pred             -------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   ..+++.+|+...+.. |+++.++++.|..+.
T Consensus       235 ~~~~~~~~~~~~~~~~li~~~l~~~p~~-Rps~~ell~~l~~~~  277 (327)
T 3poz_A          235 GERLPQPPICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKMA  277 (327)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSCGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhh-CCCHHHHHHHHHHHH
Confidence                         457788888866665 688999999887664

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.4e-34  Score=237.44  Aligned_cols=227  Identities=16%  Similarity=0.176  Sum_probs=155.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----   82 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----   82 (260)
                      ...+.|++.+.||+|+||.||+|++     +|+.||+|++.......    .......+.+|+.+++.++||||+     
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   89 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVR----NAKDTAHTKAERNILEEVKHPFIVDLIYA   89 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEEE
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhh----hhhHHHHHHHHHHHHHhCCCCCccceeEE
Confidence            3456689999999999999999997     48899999865432211    111235678899999999999999     


Q ss_pred             EeCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          83 LDDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        83 ~~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                      +.+....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  166 (327)
T 3a62_A           90 FQTGGKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG  166 (327)
T ss_dssp             EECSSCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCS
T ss_pred             EEcCCEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCC
Confidence            222222222       4455554432   357888999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      +++..........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+...
T Consensus       167 ~~~~~~~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  236 (327)
T 3a62_A          167 LCKESIHDGTVTH----------TFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC  236 (327)
T ss_dssp             CC----------C----------TTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             cccccccCCcccc----------ccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            9875432211100          01111222233332  457889999999999999999998876   45555665554


Q ss_pred             c---cccCCccHHHHHHHHHHhccccccc
Q psy7935         231 Y---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .   +...++.+.+++.+|...++..|..
T Consensus       237 ~~~~p~~~~~~~~~li~~~L~~dp~~R~~  265 (327)
T 3a62_A          237 KLNLPPYLTQEARDLLKKLLKRNAASRLG  265 (327)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSCGGGSTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcCHhhccC
Confidence            3   2334567789999999888888863

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=3.8e-34  Score=241.05  Aligned_cols=223  Identities=17%  Similarity=0.185  Sum_probs=160.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      +...+.|++.+.||+|+||.||+|++.       ++.||||++....       .....+.+.+|++++.++ .||||+ 
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           18 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-------CHHHHHHHHHHHHHHHhhcCCcceee
Confidence            455677999999999999999999852       5789999864321       111246789999999999 789999 


Q ss_pred             EeC---C-Cc-hhh-------hhHHHhhccCcc-----------------------------------------------
Q psy7935          83 LDD---V-QK-SAI-------QTLISNLDSQNI-----------------------------------------------  103 (260)
Q Consensus        83 ~~~---~-~~-~~~-------~~l~~~l~~~~~-----------------------------------------------  103 (260)
                      +++   . .. .++       ++|.+++.....                                               
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            332   2 22 222       577777754321                                               


Q ss_pred             ----------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935         104 ----------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus       104 ----------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                                      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  250 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV  250 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch
Confidence                            1128889999999999999999999999999999999999999999999999997654322111


Q ss_pred             ccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc--------------------------
Q psy7935         168 VDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV--------------------------  218 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~--------------------------  218 (260)
                      .        .....+...+.+|+..  ..++.++|+||+|++++++++ |..|+                          
T Consensus       251 ~--------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  322 (359)
T 3vhe_A          251 R--------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT  322 (359)
T ss_dssp             E--------C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCC
T ss_pred             h--------ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCC
Confidence            0        0111122223344433  557889999999999999998 76553                          


Q ss_pred             -cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 -DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                       .+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       323 ~~l~~li~~~l~~dP~~-Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          323 PEMYQTMLDCWHGEPSQ-RPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhh-CCCHHHHHHHHHHHH
Confidence             2456777777765655 567778777777654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1e-33  Score=233.76  Aligned_cols=229  Identities=18%  Similarity=0.193  Sum_probs=158.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC---CCCeE-EeCC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR---MADIC-LDDV   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---h~~i~-~~~~   86 (260)
                      ...+.|++.+.||+|+||.||+|++  +|+.||||++...........   ....+.+|+.++++++   ||||+ +++.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---~~~~~~~e~~~l~~l~~~~h~niv~~~~~   82 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGG---LPISTVREVALLRRLEAFEHPNVVRLMDV   82 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSC---CCHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccc---cchhHHHHHHHHHHHhhcCCCCeEEeeee
Confidence            3456799999999999999999997  489999998754332111100   1234566777766664   99999 3221


Q ss_pred             ----Cc-----hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          87 ----QK-----SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        87 ----~~-----~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                          ..     .++      ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl  161 (308)
T 3g33_A           83 CATSRTDREIKVTLVFEHVDQDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL  161 (308)
T ss_dssp             EEECCSSSEEEEEEEEECCCCBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEE
T ss_pred             eeccCCCCceeEEEEehhhhcCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEE
Confidence                11     111      66677766543 334899999999999999999999999999999999999999999999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHH
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNW  226 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~  226 (260)
                      +|||++..........           ...++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....
T Consensus       162 ~Dfg~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~  230 (308)
T 3g33_A          162 ADFGLARIYSYQMALT-----------PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGK  230 (308)
T ss_dssp             CSCSCTTTSTTCCCSG-----------GGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHH
T ss_pred             eeCccccccCCCcccC-----------CccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999997654332111           01112223333333  457889999999999999999998875   3344444


Q ss_pred             HHhhc------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSY------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +....                              ....++.+.+++.+|...++..|..
T Consensus       231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  290 (308)
T 3g33_A          231 IFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS  290 (308)
T ss_dssp             HHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC
Confidence            43321                              1122456678889998888888865

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.5e-34  Score=237.94  Aligned_cols=219  Identities=17%  Similarity=0.293  Sum_probs=154.6

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccE----EEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSV----LVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD-   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~v----avK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~-   85 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.+    ++|.+.....  ..     ....+.+|+.++++++||||+ +++ 
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~--~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~   85 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PK-----ANKEILDEAYVMASVDNPHVCRLLGI   85 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS--CC-----CHHHHHHHHHHHTTCCBTTBCCCCEE
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC--HH-----HHHHHHHHHHHHHhCCCCCeeEEEEE
Confidence            3566899999999999999999983  5555    5554322111  11     246788999999999999999 222 


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        .....+       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~  163 (327)
T 3lzb_A           86 CLTSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGL  163 (327)
T ss_dssp             EESSSEEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC
T ss_pred             EecCCceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcc
Confidence              222211       6777777553  23588899999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc--------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV--------------  218 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~--------------  218 (260)
                      +............         ....+.+ +.+|+..  ..+++++|+||+|++++++++ |..|+              
T Consensus       164 a~~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~  234 (327)
T 3lzb_A          164 AKLLGAEEKEYHA---------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK  234 (327)
T ss_dssp             -------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT
T ss_pred             eeEccCccccccc---------cCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHc
Confidence            9766433211100         0011112 3333333  457889999999999999998 66543              


Q ss_pred             ------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         219 ------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       219 ------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                  ++.+++.+|+...+.. |+++.++++.|.++..
T Consensus       235 ~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          235 GERLPQPPICTIDVYMIMRKCWMIDADS-RPKFRELIIEFSKMAR  278 (327)
T ss_dssp             TCCCCCCTTBCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHT
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHHHh
Confidence                        2567888888866665 6888999998887653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=8.6e-35  Score=248.90  Aligned_cols=225  Identities=12%  Similarity=0.081  Sum_probs=162.4

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||+|++....     .........+.+|..++..++||||+     +.+.
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  133 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE  133 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence            345689999999999999999998  48999999864321     11111234578899999999999999     3333


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++++||+|||+++.
T Consensus       134 ~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~  211 (412)
T 2vd5_A          134 NYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK  211 (412)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence            32222       4555555432  23588999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc---------ccccccceeEeecceeeeecccccccc---HHHHHHHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWI  227 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~  227 (260)
                      ........+         ....++..+.+|+..         ..++.++|+||+|++++++++|..|+.   ..+....+
T Consensus       212 ~~~~~~~~~---------~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i  282 (412)
T 2vd5_A          212 LRADGTVRS---------LVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI  282 (412)
T ss_dssp             CCTTSCEEC---------SSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred             ccCCCcccc---------ceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            543321110         011222223344433         257899999999999999999999876   45555555


Q ss_pred             Hhhc-----c---ccCCccHHHHHHHHHHhcccccc
Q psy7935         228 LSSY-----R---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       228 ~~~~-----~---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ....     +   ...++.+.+++++|.. ++..|.
T Consensus       283 ~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rl  317 (412)
T 2vd5_A          283 VHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRL  317 (412)
T ss_dssp             HTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCT
T ss_pred             HhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcC
Confidence            5421     1   2345677888888887 777774

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.4e-34  Score=250.58  Aligned_cols=226  Identities=16%  Similarity=0.201  Sum_probs=155.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||||++......     .......+.+|+.+++.++||||+ +++.  ...
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~  221 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-----AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD  221 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEETT
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-----hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC
Confidence            35689999999999999999998  4889999986533211     111235678899999999999999 2221  111


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++.+++|+.+..+      ...+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++....
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred             EEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence            22234444444322      2358899999999999999999998 9999999999999999999999999999975432


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~  234 (260)
                      .....          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+....   +..
T Consensus       302 ~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~  371 (446)
T 4ejn_A          302 DGATM----------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT  371 (446)
T ss_dssp             ---------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred             CCccc----------ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence            22111          111122223344433  457899999999999999999998875   555555555443   233


Q ss_pred             CCccHHHHHHHHHHhcccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .++.+.+++.+|...++..|.
T Consensus       372 ~~~~~~~li~~~L~~dP~~R~  392 (446)
T 4ejn_A          372 LGPEAKSLLSGLLKKDPKQRL  392 (446)
T ss_dssp             SCHHHHHHHHHHTCSSTTTST
T ss_pred             CCHHHHHHHHHHcccCHHHhC
Confidence            457788999999999999887

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9.2e-34  Score=230.71  Aligned_cols=218  Identities=15%  Similarity=0.198  Sum_probs=157.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDV   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~   86 (260)
                      +...+.|++.+.||+|+||.||+|++. +..||+|.+.....         ..+.+.+|++++++++||||+    +...
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   79 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---------SPDAFLAEANLMKQLQHQRLVRLYAVVTQ   79 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc---------cHHHHHHHHHHHHhCCCcCcceEEEEEcC
Confidence            445677999999999999999999986 56899998643221         135688999999999999999    2222


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||++..
T Consensus        80 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           80 EPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             SSCEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCcEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            22222       56666665432 23588899999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc-----------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-----------------  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-----------------  219 (260)
                      ..........         ...+...+.+|+..  ..++.++|+||+|++++++++ |..|+.                 
T Consensus       159 ~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  229 (279)
T 1qpc_A          159 IEDNEYTARE---------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM  229 (279)
T ss_dssp             CSSSCEECCT---------TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             ccCccccccc---------CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC
Confidence            6443211100         00011112233333  457889999999999999998 665542                 


Q ss_pred             ---------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ---------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ---------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                               +.+++.+|+...+.. |+++.++++.|.++
T Consensus       230 ~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~l~~~  267 (279)
T 1qpc_A          230 VRPDNCPEELYQLMRLCWKERPED-RPTFDYLRSVLEDF  267 (279)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHhccChhh-CCCHHHHHHHHHHH
Confidence                     346666666655554 56777777766655

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.2e-34  Score=249.42  Aligned_cols=223  Identities=17%  Similarity=0.135  Sum_probs=164.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ..+.|.+.+.||+|+||.||+|++.  |+.||||++....     .........+.+|+.+++.++||||+ ++    +.
T Consensus        14 ~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~   88 (476)
T 2y94_A           14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK-----IRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP   88 (476)
T ss_dssp             EETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH-----HHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             eecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh-----ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3456889999999999999999984  8999999865322     11112245789999999999999999 32    22


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        89 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~  165 (476)
T 2y94_A           89 SDIFMVMEYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM  165 (476)
T ss_dssp             SEEEEEEECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhh
Confidence            22222       5666666543   3589999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (260)
                      ........           +. .+.+.| +|+..   ...++++|+||+|++++++++|..|+.   ...+...+..+..
T Consensus       166 ~~~~~~~~-----------~~-~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  233 (476)
T 2y94_A          166 MSDGEFLR-----------TS-CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF  233 (476)
T ss_dssp             CCTTCCBC-----------CC-CSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC
T ss_pred             cccccccc-----------cc-CCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc
Confidence            54322111           11 122333 33333   234688999999999999999998876   4555566555432


Q ss_pred             ---ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         ...++.+.+++.+|...++..|..
T Consensus       234 ~~p~~~s~~~~~Li~~~L~~dP~~Rpt  260 (476)
T 2y94_A          234 YTPQYLNPSVISLLKHMLQVDPMKRAT  260 (476)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CCCccCCHHHHHHHHHHcCCCchhCcC
Confidence               223466778888888777777753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=7.2e-34  Score=231.78  Aligned_cols=218  Identities=13%  Similarity=0.158  Sum_probs=155.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----   85 (260)
                      ....+.|++.+.||+|+||.||+|.+. +..||+|++.....         ..+.+.+|++++.+++||||+ +++    
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   90 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSHEKLVQLYGVCTK   90 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---------CHHHHHHHHHHHhcCCCCCEeeEEEEEec
Confidence            445567899999999999999999986 66899998653321         135688999999999999999 222    


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  168 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR  168 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred             CCCeEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccc
Confidence            222222       4566666442  2358899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      ............         ..+...+.+|+..  ..+++++|+||+|++++++++ |..|+.                
T Consensus       169 ~~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~  239 (283)
T 3gen_A          169 YVLDDEYTSSVG---------SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR  239 (283)
T ss_dssp             GBCCHHHHSTTS---------TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC
T ss_pred             cccccccccccC---------CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccC
Confidence            654332111000         0001112233322  457889999999999999998 765532                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                ..+++.+|+...+.. |+++.++++.|.++.
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          240 LYRPHLASEKVYTIMYSCWHEKADE-RPTFKILLSNILDVM  279 (283)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCcCCHHHHHHHHHHccCChhH-CcCHHHHHHHHHHHh
Confidence                      456777777755555 577778777777654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.5e-34  Score=242.81  Aligned_cols=203  Identities=15%  Similarity=0.097  Sum_probs=137.6

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCC---chhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRH---PKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~---~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ....+.|++.+.||+|+||.||+|.+.       ++.||||++.......   ...........+..|+..+..++||||
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~i  110 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGV  110 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCS
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCC
Confidence            344567999999999999999999983       4789999864332100   001111122345566777888899999


Q ss_pred             E-EeCCC------chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc--
Q psy7935          82 C-LDDVQ------KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS--  144 (260)
Q Consensus        82 ~-~~~~~------~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~--  144 (260)
                      + +++..      ....        ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++  
T Consensus       111 v~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          111 PKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             CCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred             CeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence            9 33321      1112        5555555432  24589999999999999999999999999999999999999  


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .++.+||+|||+++............  . .......++..+.+|+..  ..++.++|+||||++++++++|..|+.
T Consensus       189 ~~~~~kl~DFG~a~~~~~~~~~~~~~--~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~  262 (364)
T 3op5_A          189 NPDQVYLVDYGLAYRYCPEGVHKAYA--A-DPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWE  262 (364)
T ss_dssp             CTTCEEECCCTTCEESSGGGCCCCSS--C-CSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred             CCCeEEEEECCcceecccCCcccccc--c-CcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence            78999999999997765432111000  0 000111122223334333  347899999999999999999987764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=9.7e-34  Score=239.92  Aligned_cols=218  Identities=14%  Similarity=0.152  Sum_probs=151.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.|++.+.||+|+||.||+|++.     +..||||.+....       .....+.+.+|+.++++++||||+ +++   
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  116 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-------TEKQRRDFLGEASIMGQFDHPNIIRLEGVVT  116 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            456888999999999999999874     6689999854321       111246799999999999999999 222   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  194 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG  194 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccc
Confidence             222222       5666666543  235888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc---------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV---------------  218 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~---------------  218 (260)
                      +............        ....+.+ +.+|+..  ..+++++|+||||++++++++ |..|+               
T Consensus       195 ~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~  266 (373)
T 2qol_A          195 RVLEDDPEAAYTT--------RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG  266 (373)
T ss_dssp             ---------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTT
T ss_pred             cccccCCccceec--------cCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            7664432111000        0001112 2333333  457889999999999999887 66553               


Q ss_pred             -----------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 -----------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 -----------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                 .+.+++.+|+...+.. |+++.++++.|..+.
T Consensus       267 ~~~~~~~~~~~~l~~li~~cl~~dp~~-RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          267 YRLPPPMDCPAALYQLMLDCWQKDRNN-RPKFEQIVSILDKLI  308 (373)
T ss_dssp             EECCCCTTCBHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCccccHHHHHHHHHHhCcChhh-CcCHHHHHHHHHHHH
Confidence                       2567888888866665 678899998888764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=8.9e-34  Score=229.76  Aligned_cols=214  Identities=19%  Similarity=0.308  Sum_probs=145.6

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      ...+.|++.+.||+|+||.||+|++++..||||++......    ......+.+.+|+++++.++||||+ +++    ..
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDE----DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP   79 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcc----cHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            34556888999999999999999999999999985432211    1112246788999999999999999 222    22


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC---ceecCCCCCcEEEcc--------CCcE
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN---IIHGDLTTSNMILSS--------DHHL  149 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~--------~~~~  149 (260)
                      ..++       ++|.+++..    +.+++..++.++.|++.||+|||++|   |+||||||+|||++.        ++.+
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~  155 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKIL  155 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCE
T ss_pred             ceEEEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcce
Confidence            2222       445555543    35889999999999999999999999   899999999999986        7889


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc-------
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------  219 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------  219 (260)
                      ||+|||++.........            .. .+.+.| +|+..  ..+++++|+||+|++++++++|..|+.       
T Consensus       156 kl~Dfg~~~~~~~~~~~------------~~-~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  222 (271)
T 3dtc_A          156 KITDFGLAREWHRTTKM------------SA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV  222 (271)
T ss_dssp             EECCCCC--------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH
T ss_pred             EEccCCccccccccccc------------CC-CCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999765432211            01 112222 33332  457889999999999999999987654       


Q ss_pred             --------------------HHHHHHHHHhhccccCCccHHHHHHHHHH
Q psy7935         220 --------------------FRDMFNWILSSYRRQNRKQFETVMKTFAE  248 (260)
Q Consensus       220 --------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~  248 (260)
                                          ..+++.+|+...+.. |+++.++++.|.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~-Rps~~e~l~~L~~  270 (271)
T 3dtc_A          223 AYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHS-RPSFTNILDQLTT  270 (271)
T ss_dssp             HHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHC
T ss_pred             HHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCccc-CcCHHHHHHHHhc
Confidence                                345556666544444 4566666665543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.7e-34  Score=246.89  Aligned_cols=228  Identities=20%  Similarity=0.167  Sum_probs=156.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~   88 (260)
                      .+.|.+.+.||+|+||.||+|.+.  ++.||||++..+...............+.+|+.++++++||||+    +++...
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~  213 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED  213 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence            356888999999999999999984  78999999766543322222222234588999999999999999    333333


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeecccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQ  158 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~  158 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+|||+++
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             eEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            232       3444444432   35889999999999999999999999999999999999975   4469999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc----HHHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~  229 (260)
                      ........           .+..+...+.+|+..     ..++.++|+||+|++++++++|..|+.    ...+.+.+..
T Consensus       291 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~  359 (419)
T 3i6u_A          291 ILGETSLM-----------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  359 (419)
T ss_dssp             SCC----------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHT
T ss_pred             ecCCCccc-----------cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhc
Confidence            65432211           111222223344433     457789999999999999999988865    1222333332


Q ss_pred             hcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +..       ...++.+.+++.+|...++..|..
T Consensus       360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  393 (419)
T 3i6u_A          360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT  393 (419)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCCchhhcccCHHHHHHHHHHccCChhHCcC
Confidence            211       223556677888888777777764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6.4e-34  Score=246.82  Aligned_cols=217  Identities=16%  Similarity=0.205  Sum_probs=154.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDV   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~   86 (260)
                      +...+.|++.+.||+|+||.||+|++. +..||||++.....         ..+.+.+|+.++++++||||+ +   +..
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  250 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE  250 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence            445567889999999999999999996 56899998643221         135789999999999999999 2   222


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus       251 ~~~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  329 (452)
T 1fmk_A          251 EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL  329 (452)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-
T ss_pred             CceEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCcccee
Confidence            22222       56666665322 33588899999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      .........          ....+...| +|+..  ..++.++|+||||++++++++ |..|+.                
T Consensus       330 ~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~  399 (452)
T 1fmk_A          330 IEDNEYTAR----------QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR  399 (452)
T ss_dssp             -----------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred             cCCCceecc----------cCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            543211100          000111223 33333  567899999999999999999 665532                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                +.+++.+|+...+.. |+++.++++.|.++
T Consensus       400 ~~~~~~~~~~l~~li~~cl~~dP~~-Rpt~~~l~~~L~~~  438 (452)
T 1fmk_A          400 MPCPPECPESLHDLMCQCWRKEPEE-RPTFEYLQAFLEDY  438 (452)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHH
Confidence                      445666666655554 56777777776655

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=8.8e-34  Score=235.17  Aligned_cols=225  Identities=17%  Similarity=0.226  Sum_probs=147.1

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|++++.||+|+||.||+|.+.  |+.||+|++.......       ....+.+|+.++++++||||+ +++    ..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   76 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG-------TPSTAIREISLMKELKHENIVRLYDVIHTEN   76 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTC-------SCHHHHHHHHHHTTCCBTTBCCEEEEECCTT
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc-------cHHHHHHHHHHHHhcCCCCcceEEEEEEECC
Confidence            346888999999999999999984  8999999875433111       124678899999999999999 222    22


Q ss_pred             chhh------hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          88 KSAI------QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~------~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ..++      ++|.+++.....   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        77 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~  156 (317)
T 2pmi_A           77 KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR  156 (317)
T ss_dssp             EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred             eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccce
Confidence            2222      455555543211   2358889999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-  231 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-  231 (260)
                      ..........          ...++..+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+....+.... 
T Consensus       157 ~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  226 (317)
T 2pmi_A          157 AFGIPVNTFS----------SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG  226 (317)
T ss_dssp             ETTSCCCCCC----------CCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ecCCCcccCC----------CCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence            6543321110          01112222333333   347889999999999999999988875   333333332210 


Q ss_pred             ------------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ------------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ------------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                          ....++.+.+++.+|...++..|..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  287 (317)
T 2pmi_A          227 TPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS  287 (317)
T ss_dssp             SCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC
Confidence                                                0123456788899998888888864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.1e-33  Score=235.54  Aligned_cols=234  Identities=17%  Similarity=0.220  Sum_probs=154.2

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||||++.....  .     ...+.+.+|+.++++++||||+ +++.    ..
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR--E-----LAREKVMREVKALAKLEHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST--T-----THHHHHHHHHHHHTSCCCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc--h-----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEEecc
Confidence            3578899999999999999998  489999998754321  1     1246789999999999999999 3321    11


Q ss_pred             ---------------------------------------------------------hhh-------hhHHHhhccCccc
Q psy7935          89 ---------------------------------------------------------SAI-------QTLISNLDSQNIT  104 (260)
Q Consensus        89 ---------------------------------------------------------~~~-------~~l~~~l~~~~~~  104 (260)
                                                                               .++       ++|.+++......
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                     111       4555555544333


Q ss_pred             ccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccccccccc--ccceeeeee
Q psy7935         105 RENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVL--KRNLTTIIV  182 (260)
Q Consensus       105 ~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~--~~~~~~~~~  182 (260)
                      ...++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++...............  ........+
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            445666788899999999999999999999999999999999999999999998765543211110000  000111122


Q ss_pred             eeeecCcccc--ccccccceeEeecceeeeecccccccc-HHHHHHHHHhhcc----ccCCccHHHHHHHHHHhcccccc
Q psy7935         183 VAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-FRDMFNWILSSYR----RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       183 ~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...+.+|+..  ..+++++|+||+|+++++++++..|.. .............    ....+.+.+++.+|...++..|.
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp  318 (332)
T 3qd2_B          239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP  318 (332)
T ss_dssp             CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSC
T ss_pred             CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCC
Confidence            2223334433  457899999999999999999865544 2222222222111    11234556677777777777775


Q ss_pred             c
Q psy7935         256 R  256 (260)
Q Consensus       256 ~  256 (260)
                      .
T Consensus       319 s  319 (332)
T 3qd2_B          319 E  319 (332)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=7.2e-34  Score=249.06  Aligned_cols=219  Identities=16%  Similarity=0.212  Sum_probs=161.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      +.....|++.+.||+|+||.||+|++.  +..||||.+.....         ..+.+.+|+.++++++||||+ +++   
T Consensus       216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~l~~~~~  286 (495)
T 1opk_A          216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------EVEEFLKEAAVMKEIKHPNLVQLLGVCT  286 (495)
T ss_dssp             BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---------chHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            444566888999999999999999995  78999998643221         146789999999999999999 222   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       287 ~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  365 (495)
T 1opk_A          287 REPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS  365 (495)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred             cCCcEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccc
Confidence             222222       56777775433 345888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc----------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV----------------  218 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~----------------  218 (260)
                      +...........         ...+...+.+|+..  ..++.++|+||||++++++++ |..|+                
T Consensus       366 ~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~  436 (495)
T 1opk_A          366 RLMTGDTYTAHA---------GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY  436 (495)
T ss_dssp             ECCTTCCEECCT---------TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC
T ss_pred             eeccCCceeecC---------CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            765432211100         00011112233333  457889999999999999998 65432                


Q ss_pred             ----------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 ----------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 ----------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                .+.+++.+|+...+.. |+++.++++.|..+-
T Consensus       437 ~~~~~~~~~~~l~~li~~cl~~dP~~-RPs~~el~~~L~~~~  477 (495)
T 1opk_A          437 RMERPEGCPEKVYELMRACWQWNPSD-RPSFAEIHQAFETMF  477 (495)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHTSC
T ss_pred             CCCCCCCCCHHHHHHHHHHcCcChhH-CcCHHHHHHHHHHHH
Confidence                      2557788888866665 678888888887653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=6.1e-34  Score=236.53  Aligned_cols=222  Identities=17%  Similarity=0.189  Sum_probs=148.0

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---   83 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---   83 (260)
                      ...+.|++.+.||+|+||.||+|++.  +   ..||||++.......      ...+.+.+|++++++++||||+ +   
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~   93 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS------SDIEEFLREAACMKEFDHPHVAKLVGV   93 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C------HHHHHHHHHHHHHTTCCCTTBCCCCEE
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH------HHHHHHHHHHHHHHHCCCCceehhhce
Confidence            44566899999999999999999974  2   279999864332211      1246789999999999999999 2   


Q ss_pred             -eCCCch------hh-------hhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          84 -DDVQKS------AI-------QTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        84 -~~~~~~------~~-------~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                       ......      ++       ++|.+++.....   ...+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence             222211      11       466666543221   1248889999999999999999999999999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---  219 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---  219 (260)
                      +.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.   
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~  244 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQG---------CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE  244 (323)
T ss_dssp             SCEEECCCCC--------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             CCEEEeecccccccccccccccc---------ccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC
Confidence            99999999999765433211100         0111122 2333333  457889999999999999999 655432   


Q ss_pred             -----------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -----------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -----------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                             +.+++.+|+...+.. |+++.++++.++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          245 NAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQ-RPSFTCLRMELENIL  297 (323)
T ss_dssp             GGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                                   456777777766655 567777777777654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.2e-33  Score=232.06  Aligned_cols=222  Identities=13%  Similarity=0.133  Sum_probs=156.8

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee----C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD----D   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~----~   85 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++.....          ...+.+|+.++..+ .|+|++ ++    +
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~   77 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAGCTGIPNVYYFGQE   77 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----------cHHHHHHHHHHHHHhcCCCCCeEEeecCC
Confidence            356789999999999999999997  589999998643221          13467888888888 678777 21    1


Q ss_pred             CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc-----EEEEee
Q psy7935          86 VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH-----LVMIDF  154 (260)
Q Consensus        86 ~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~-----~kl~DF  154 (260)
                      ....++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.     +||+||
T Consensus        78 ~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Df  155 (298)
T 1csn_A           78 GLHNVLVIDLLGPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDF  155 (298)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred             CceeEEEEEecCCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEEC
Confidence            112122      5666666543  235889999999999999999999999999999999999987665     999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------------  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------------  219 (260)
                      |++.............+..   .....+...+.+|+..  ..+++++|+||+|++++++++|..|+.             
T Consensus       156 g~~~~~~~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  232 (298)
T 1csn_A          156 GMVKFYRDPVTKQHIPYRE---KKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER  232 (298)
T ss_dssp             TTCEESBCTTTCCBCCCCC---CCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred             ccccccccccccccccccC---ccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH
Confidence            9998765443221111000   0111122222333333  457889999999999999999887742             


Q ss_pred             --------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 --------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 --------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                          ..+++.+|+...+.. ||++.++.+.+.++..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          233 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDA-TPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             HHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTC-CCCHHHHHHHHHHHHH
T ss_pred             HHhhccCccHHHHHhhCcHHHHHHHHHHhcCCccc-CCCHHHHHHHHHHHHH
Confidence                                446677777755554 6677777777776543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6.8e-34  Score=238.74  Aligned_cols=221  Identities=15%  Similarity=0.190  Sum_probs=154.7

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|+.++.||+|+||.||+|++  +|+.||||++......     .....+.+.+|+.++++++||||+ +++    ..
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  127 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH  127 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-----HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-----chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence            34578899999999999999997  4899999986543221     222346789999999999999999 322    22


Q ss_pred             chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++      +++.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       128 ~~~lv~e~~~g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          128 TAWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             EEEEEEECCSEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             eEEEEEecCCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            2222      4444444322  2358889999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ....              ..+...+.+|+..     ..++.++|+||+|++++++++|..|+.   ..+....+..... 
T Consensus       206 ~~~~--------------~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~  271 (348)
T 1u5q_A          206 PANS--------------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP  271 (348)
T ss_dssp             SBCC--------------CCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             CCCc--------------ccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC
Confidence            3211              1111122233322     457889999999999999999988754   2222223322211 


Q ss_pred             ----ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ...++.+.+++.+|...++..|..
T Consensus       272 ~~~~~~~~~~l~~li~~~l~~dP~~Rps  299 (348)
T 1u5q_A          272 ALQSGHWSEYFRNFVDSCLQKIPQDRPT  299 (348)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCCHHHHHHHHHHcccChhhCcC
Confidence                112344566666666666666653

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.3e-34  Score=242.58  Aligned_cols=189  Identities=13%  Similarity=0.173  Sum_probs=140.7

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----C
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----D   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~   85 (260)
                      ..++.|++.+.||+|+||.||+|++.  |+.||||++......       .....+.+|++++++++||||+ ++    +
T Consensus         6 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   78 (396)
T 4eut_A            6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-------RPVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (396)
T ss_dssp             CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-------SCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-------chHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence            34567899999999999999999995  899999986432211       1235678999999999999999 32    2


Q ss_pred             CCchh--h-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE----ccCCcEEEE
Q psy7935          86 VQKSA--I-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL----SSDHHLVMI  152 (260)
Q Consensus        86 ~~~~~--~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill----~~~~~~kl~  152 (260)
                      .....  +       ++|.+++........+++..++.++.|++.||+|||++||+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence            22212  2       5666666554322338999999999999999999999999999999999999    778889999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc----------ccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----------QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||+++.........           ...+...+.+|+..          ..++.++|+||+|++++++++|..|+.
T Consensus       159 DFG~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~  224 (396)
T 4eut_A          159 DFGAARELEDDEQFV-----------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR  224 (396)
T ss_dssp             CGGGCEECCCGGGSS-----------CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred             cCCCceEccCCCccc-----------cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            999997654432111           11111122233322          457789999999999999999988763

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=4.6e-34  Score=243.25  Aligned_cols=196  Identities=11%  Similarity=0.067  Sum_probs=142.3

Q ss_pred             cccccCcceeeccC--CceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----e
Q psy7935          14 SDMVLQPAECFKQG--AEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----D   84 (260)
Q Consensus        14 ~~~~~~~~~~lg~G--~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~   84 (260)
                      ..+.|++.+.||+|  +||.||+|++.  |+.||||++......      ......+.+|+.++++++||||+ +    .
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   96 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS------NEMVTFLQGELHVSKLFNHPNIVPYRATFI   96 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC------hHHHHHHHHHHHHHHhCCCCCCCcEeEEEE
Confidence            44569999999999  99999999994  899999987554321      12346788999999999999999 3    2


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      +....++       ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||.+
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~  175 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN  175 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGC
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccc
Confidence            2222222       45555554432 245889999999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ................+   ....++..+.+|+..    ..++.++|+||+|++++++++|..|+.
T Consensus       176 ~~~~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  238 (389)
T 3gni_B          176 LSMISHGQRQRVVHDFP---KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  238 (389)
T ss_dssp             EECEETTEECSCBCCCC---TTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             eeecccccccccccccc---ccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            65433221110000000   001112223344433    357889999999999999999988864

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1e-33  Score=234.92  Aligned_cols=217  Identities=17%  Similarity=0.174  Sum_probs=158.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ...|++++.||+|+||.||++.+      +++.||||++....       .......+.+|++++++++||||+ +++  
T Consensus        30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  102 (318)
T 3lxp_A           30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-------GPQHRSGWKQEIDILRTLYHEHIIKYKGCC  102 (318)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-------ChHHHHHHHHHHHHHHhCCCcchhhEEEEE
Confidence            34458999999999999999875      47899999864321       112356789999999999999999 322  


Q ss_pred             --CCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 --VQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 --~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                        .....+         ++|.+++...    .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus       103 ~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Df  178 (318)
T 3lxp_A          103 EDAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDF  178 (318)
T ss_dssp             EETTTTEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCG
T ss_pred             ecCCCceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCc
Confidence              212222         4666666544    3888999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccccc------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------------  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------------  219 (260)
                      |++............        .....+.. +.+|+..  ..++.++|+||+|++++++++|..|+.            
T Consensus       179 g~a~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~  250 (318)
T 3lxp_A          179 GLAKAVPEGHEYYRV--------REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI  250 (318)
T ss_dssp             GGCEECCTTCSEEEC-----------CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCS
T ss_pred             ccccccccccccccc--------ccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcc
Confidence            999776543211000        00111112 2333333  457789999999999999999865532            


Q ss_pred             -----------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 -----------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 -----------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                                   +.+++.+|+...+.. |+++.++++.|..+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          251 AQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASF-RPTFENLIPILKTVHE  310 (318)
T ss_dssp             CCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHHHH
Confidence                                         456777788766655 6788888888876643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=2.4e-34  Score=245.96  Aligned_cols=219  Identities=14%  Similarity=0.117  Sum_probs=157.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||+|++....     .........+.+|..++..++||||+     +.+..
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-----~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            456889999999999999999984  8899999864321     11111123477899999999999999     33333


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            2222       4555555433    4788999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCccccc------cccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ------SYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      ........         .+..++..+.+|+...      .++.++|+||+|++++++++|..|+.   ..+....++.+.
T Consensus       219 ~~~~~~~~---------~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~  289 (410)
T 3v8s_A          219 NKEGMVRC---------DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK  289 (410)
T ss_dssp             CTTSEEEC---------CSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH
T ss_pred             ccCCcccc---------cCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcc
Confidence            43321110         1112222233444332      27789999999999999999999976   556666665532


Q ss_pred             -----cc--cCCccHHHHHHHHHHhcc
Q psy7935         232 -----RR--QNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       232 -----~~--~~~~~~~~il~~l~~~~~  251 (260)
                           +.  ..++.+.+++.+|....+
T Consensus       290 ~~~~~p~~~~~s~~~~~li~~lL~~~~  316 (410)
T 3v8s_A          290 NSLTFPDDNDISKEAKNLICAFLTDRE  316 (410)
T ss_dssp             HHCCCCTTCCCCHHHHHHHHHHSSCGG
T ss_pred             ccccCCCcccccHHHHHHHHHHccChh
Confidence                 11  235667888888876443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-33  Score=238.65  Aligned_cols=223  Identities=17%  Similarity=0.173  Sum_probs=161.6

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCe
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADI   81 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i   81 (260)
                      ....+.|++.+.||+|+||.||+|++.         +..||||++....       .......+.+|+++++++ +||||
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hpnI  137 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGKHKNI  137 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-------CHHHHHHHHHHHHHHHHhcCCchh
Confidence            344567899999999999999999973         2579999864321       111246788999999999 99999


Q ss_pred             E-EeC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          82 C-LDD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        82 ~-~~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      + +++    ....++       ++|.+++.....             ...+++..++.++.|++.||+|||++||+||||
T Consensus       138 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl  217 (382)
T 3tt0_A          138 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL  217 (382)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             hhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence            9 222    222222       477777754321             235899999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      ||+|||++.++.+||+|||+++............         ...+.+ +.+|+..  ..++.++|+||+|++++++++
T Consensus       218 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt  288 (382)
T 3tt0_A          218 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT---------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT  288 (382)
T ss_dssp             CGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCT---------TCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CcceEEEcCCCcEEEcccCccccccccccccccc---------CCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHh
Confidence            9999999999999999999997654332111100         001112 2233332  457889999999999999998


Q ss_pred             -ccccc--------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         214 -EDKAV--------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       214 -~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                       |..|+                          .+.+++.+|+...+.. |+++.++++.|.++..
T Consensus       289 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          289 LGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ-RPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             TSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHHH
Confidence             65543                          2556778888866665 6788888888877653

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-33  Score=236.03  Aligned_cols=222  Identities=15%  Similarity=0.161  Sum_probs=159.8

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcC-------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLG-------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ...+.|++.+.||+|+||.||+|++.+       +.||+|++....       .....+.+.+|+.++++++||||+ ++
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~  116 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDNPNIVKLL  116 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            345668999999999999999999853       789999854321       112246789999999999999999 22


Q ss_pred             C----CCchhh-------hhHHHhhccCcc---------------------cccchHHHHHHHHHHHHHHHHHhhhCCce
Q psy7935          85 D----VQKSAI-------QTLISNLDSQNI---------------------TRENISDIIKLLSIEIGTTLSVMHSNNII  132 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~  132 (260)
                      +    ....++       ++|.+++.....                     ...+++..++.++.|++.||.|||++||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iv  196 (343)
T 1luf_A          117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV  196 (343)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            2    222222       467776654311                     14588899999999999999999999999


Q ss_pred             ecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceee
Q psy7935         133 HGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQI  209 (260)
Q Consensus       133 H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~  209 (260)
                      ||||||+|||++.++.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++
T Consensus       197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~---------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  267 (343)
T 1luf_A          197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD---------GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW  267 (343)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-------------CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             cCCCCcceEEECCCCeEEEeecCCCcccccCcccccc---------CCCcccceecChhhhccCCcCcccccHHHHHHHH
Confidence            9999999999999999999999999765432211100         0011122 2233332  45788999999999999


Q ss_pred             eecc-cccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         210 KVST-EDKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       210 ~~~~-~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                      ++++ |..|+.                          +.+++.+|+...+.. |+++.++++.|.++..
T Consensus       268 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          268 EIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPAD-RPSFCSIHRILQRMCE  335 (343)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHTTC
T ss_pred             HHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCccc-CCCHHHHHHHHHHHHh
Confidence            9998 765532                          456777777755555 5777777777776643

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=8.8e-34  Score=236.06  Aligned_cols=219  Identities=16%  Similarity=0.184  Sum_probs=160.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----   83 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----   83 (260)
                      .+.|++.+.||+|+||.||+|++      .++.||||++....        ....+.+.+|++++++++||||+ +    
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   93 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--------PDQQRDFQREIQILKALHSDFIVKYRGVS   93 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--------HHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--------HHHHHHHHHHHHHHHhcCCCceeEEEEEE
Confidence            45689999999999999999995      47899999864321        11246789999999999999999 2    


Q ss_pred             eCCCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          84 DDVQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        84 ~~~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                      .+.....+         ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Df  171 (327)
T 3lxl_A           94 YGPGRQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADF  171 (327)
T ss_dssp             ECSSSCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCG
T ss_pred             ecCCCceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccc
Confidence            32233223         4455555432  235889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeeccccccc-------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV-------------  218 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~-------------  218 (260)
                      |++............        .....+.+ +.+|+..  ..+++++|+||+|++++++++|..|+             
T Consensus       172 g~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~  243 (327)
T 3lxl_A          172 GLAKLLPLDKDYYVV--------REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC  243 (327)
T ss_dssp             GGCEECCTTCSEEEC--------SSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-
T ss_pred             ccceecccCCcccee--------eccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccc
Confidence            999766433221100        01111222 2233333  45788999999999999999986553             


Q ss_pred             ----------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         219 ----------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       219 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                                                  .+.+++.+|+...+.. |+++.++++.|+.+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          244 ERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQD-RPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             ---CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHC---
T ss_pred             ccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHHhh
Confidence                                        2567888888866665 68889998888876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.5e-33  Score=230.43  Aligned_cols=222  Identities=16%  Similarity=0.211  Sum_probs=163.3

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      +-++...+.|++.+.||+|+||.||+|.+.  +..||+|.+....         ...+.+.+|+.++++++||||+ +++
T Consensus         6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~h~~i~~~~~   76 (288)
T 3kfa_A            6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLLG   76 (288)
T ss_dssp             CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---------THHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---------HHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            334455677899999999999999999995  8899999864321         1246788999999999999999 222


Q ss_pred             ----CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                          ....++       ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+||+++.++.+||+||
T Consensus        77 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Df  155 (288)
T 3kfa_A           77 VCTREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF  155 (288)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             EEccCCCEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccC
Confidence                222222       56666665433 345889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-ccccc-------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV-------------  218 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~-------------  218 (260)
                      |++...........         ....+...+.+|+..  ..+++++|+||+|++++++++ |..|+             
T Consensus       156 g~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~  226 (288)
T 3kfa_A          156 GLSRLMTGDTYTAH---------AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE  226 (288)
T ss_dssp             CGGGTSCSSSSEEE---------TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH
T ss_pred             ccceeccCCccccc---------cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            99976543321110         001111123333333  457889999999999999998 65443             


Q ss_pred             -------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 -------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 -------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   .+.+++.+|+...+.. |+++.++++.+..+.
T Consensus       227 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          227 KDYRMERPEGCPEKVYELMRACWQWNPSD-RPSFAEIHQAFETMF  270 (288)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHhCCChhh-CcCHHHHHHHHHHHH
Confidence                         2557888888866665 578888888776554

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=7.8e-34  Score=236.11  Aligned_cols=224  Identities=13%  Similarity=0.054  Sum_probs=152.0

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----V   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~   86 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.||||++..+...       ...+.+.+|+.+++.++||||+ +++    .
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   77 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-------DCPENIKKEICINKMLNHENVVKFYGHRREG   77 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-------chHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            3456889999999999999999984  889999987543321       1135688999999999999999 322    2


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~  154 (323)
T 3tki_A           78 NIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATV  154 (323)
T ss_dssp             SEEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             CeEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccce
Confidence            22222       3455555432   3588999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccH----HHHHHHHHhhc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSY-  231 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~-  231 (260)
                      ........        ......+...+.+|+..   ...+.++|+||+|++++++++|..|+..    ........... 
T Consensus       155 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~  226 (323)
T 3tki_A          155 FRYNNRER--------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT  226 (323)
T ss_dssp             CEETTEEC--------CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT
T ss_pred             eccCCccc--------ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc
Confidence            54322111        00111122223344433   2246789999999999999999888651    11111111111 


Q ss_pred             ----cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 ----RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ----~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                          ....++.+.+++.+|...++..|.
T Consensus       227 ~~~~~~~~~~~~~~li~~~L~~dP~~R~  254 (323)
T 3tki_A          227 YLNPWKKIDSAPLALLHKILVENPSARI  254 (323)
T ss_dssp             TSTTGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cCCccccCCHHHHHHHHHHccCChhhCc
Confidence                012234556666666666666664

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=8.9e-34  Score=235.91  Aligned_cols=218  Identities=14%  Similarity=0.231  Sum_probs=157.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--Ccc----EEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRS----VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD-   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~-   85 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.    |++|.+...... ..      ...+.+|+.++.+++||||+ +++ 
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~-~~------~~~~~~e~~~l~~l~h~~iv~~~~~   83 (325)
T 3kex_A           11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR-QS------FQAVTDHMLAIGSLDHAHIVRLLGL   83 (325)
T ss_dssp             CTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC-SC------BCSCCHHHHHHHTCCCTTBCCEEEE
T ss_pred             CHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH-HH------HHHHHHHHHHHhcCCCCCcCeEEEE
Confidence            3456889999999999999999984  554    677764322211 11      23467889999999999999 332 


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        ....++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        84 ~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~  161 (325)
T 3kex_A           84 CPGSSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV  161 (325)
T ss_dssp             ECBSSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSG
T ss_pred             EcCCccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCc
Confidence              222222       5555555443  23588888999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc-------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-------------  219 (260)
                      ++..........         .....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.             
T Consensus       162 a~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~  232 (325)
T 3kex_A          162 ADLLPPDDKQLL---------YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK  232 (325)
T ss_dssp             GGGSCCCTTCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHT
T ss_pred             ccccCccccccc---------ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            987644322110         11112222 3334433  468889999999999999999 776543             


Q ss_pred             -------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   ..+++.+|+...+.. |+++.++++.|..+.
T Consensus       233 ~~~~~~~~~~~~~~~~li~~~l~~dp~~-Rps~~el~~~l~~~~  275 (325)
T 3kex_A          233 GERLAQPQICTIDVYMVMVKCWMIDENI-RPTFKELANEFTRMA  275 (325)
T ss_dssp             TCBCCCCTTBCTTTTHHHHHHTCSCTTT-SCCHHHHHHHHHHHT
T ss_pred             CCCCCCCCcCcHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                         446788888866665 688899999887764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=5.6e-34  Score=233.66  Aligned_cols=221  Identities=15%  Similarity=0.141  Sum_probs=154.8

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++  +++.||||+......          ...+.+|+.+++.++|++++    .+...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWCGAE   76 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------------CCCHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----------chHHHHHHHHHHHhcCCCCCCeeeeecCC
Confidence            446788999999999999999997  489999997543321          12467899999999988776    12111


Q ss_pred             ch--hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE---ccCCcEEEEeecc
Q psy7935          88 KS--AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGL  156 (260)
Q Consensus        88 ~~--~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill---~~~~~~kl~DFg~  156 (260)
                      ..  ++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        77 ~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~  154 (296)
T 4hgt_A           77 GDYNVMVMELLGPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTT
T ss_pred             CCceEEEEEccCCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCcc
Confidence            11  11      5566666532  2358899999999999999999999999999999999999   7899999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---------------  219 (260)
                      +.............+...   ....+...+.+|+..  ..+++++|+||+|++++++++|..|+.               
T Consensus       155 a~~~~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  231 (296)
T 4hgt_A          155 AKKYRDARTHQHIPYREN---KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS  231 (296)
T ss_dssp             CEECBCTTTCCBCCCCCS---CCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred             ceeccCcccCccCCCCcc---cccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh
Confidence            987654432111111000   011122223333333  357889999999999999999877642               


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                        +.+++.+|+...+.. |+++.++++.+.++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD-KPDYSYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC-CCCHHHHHHHHHHHH
T ss_pred             cccccchhhhhhccCCHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHH
Confidence                              456777787755555 677788888777654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-33  Score=236.80  Aligned_cols=224  Identities=16%  Similarity=0.154  Sum_probs=151.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC--CCeE-EeC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM--ADIC-LDD----   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~-~~~----   85 (260)
                      ..+.|++.+.||+|+||.||+|.+ .++.||||++......      ......+.+|+.++.+++|  +||+ +++    
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   80 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD------NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   80 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccc------hHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee
Confidence            456689999999999999999998 4788999986543321      1224678999999999987  8898 222    


Q ss_pred             CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          86 VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        86 ~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ....++      ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++ ++.+||+|||++..
T Consensus        81 ~~~~~lv~e~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~  156 (343)
T 3dbq_A           81 DQYIYMVMECGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQ  156 (343)
T ss_dssp             SSEEEEEECCCSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred             CCEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccc
Confidence            222122      6677777654   3588889999999999999999999999999999999997 68899999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc-------------ccccccceeEeecceeeeecccccccc----HHH
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------------QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRD  222 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~  222 (260)
                      ..........        ....++..+.+|+..             ..+++++|+||+|++++++++|..|+.    ...
T Consensus       157 ~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  228 (343)
T 3dbq_A          157 MQPDTTSVVK--------DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS  228 (343)
T ss_dssp             C--------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH
T ss_pred             cCcccccccC--------CCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH
Confidence            6433211000        011112222233332             457889999999999999999988865    112


Q ss_pred             HHHHHHhh-----ccccCCccHHHHHHHHHHhcccccc
Q psy7935         223 MFNWILSS-----YRRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       223 ~~~~~~~~-----~~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      .+......     .+...++.+.+++.+|...++..|.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rp  266 (343)
T 3dbq_A          229 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRI  266 (343)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCC
Confidence            22222211     1122223456666666666666664

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=9.7e-35  Score=246.47  Aligned_cols=186  Identities=10%  Similarity=0.050  Sum_probs=134.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHH---hhhcccCCCCeE-Ee----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEI---RGLMKCRMADIC-LD----   84 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~---~~l~~~~h~~i~-~~----   84 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||||++.........     ..+.+.+|+   ..+++++||||+ ++    
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~  146 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN-----AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  146 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTT-----HHHHHHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchH-----HHHHHHHHHHHHHhccccCCHHHHHHHhhhh
Confidence            45688899999999999999997  4899999997643322222     246788999   666677899997 22    


Q ss_pred             CCC-------------------c-----hhh------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCC
Q psy7935          85 DVQ-------------------K-----SAI------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNN  130 (260)
Q Consensus        85 ~~~-------------------~-----~~~------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~  130 (260)
                      ...                   .     .++      ++|.+++.....    ...+++..++.++.|++.||+|||++|
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            100                   0     111      566666654210    123556888889999999999999999


Q ss_pred             ceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--c-----------cccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q-----------SYNH  197 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-----------~~~~  197 (260)
                      |+||||||+|||++.++.+||+|||+++......             ....+ ..+.+|+..  .           .++.
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~  292 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYHRDRRTLMTF  292 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCCcc-------------cCCCC-cCccChhhhcccccccccccccccCCh
Confidence            9999999999999999999999999997532211             11122 223333333  3           6889


Q ss_pred             cceeEeecceeeeecccccccc
Q psy7935         198 HLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       198 ~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++|+||+|++++++++|..|+.
T Consensus       293 ~~DvwSlG~il~elltg~~Pf~  314 (377)
T 3byv_A          293 SFDAWALGLVIYWIWCADLPIT  314 (377)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCC-
T ss_pred             hhhHHHHHHHHHHHHHCCCCCc
Confidence            9999999999999999987754

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.3e-33  Score=232.11  Aligned_cols=217  Identities=14%  Similarity=0.192  Sum_probs=155.4

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      +++..+.||+|+||.||+|++.  |+.||||++......        ..+.+.+|+.++++++||||+ +++    ....
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--------RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEEL  117 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--------HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEE
Confidence            4667789999999999999984  899999987543211        245688999999999999999 222    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       118 ~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          118 WVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             EEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            22       4455554432    488999999999999999999999999999999999999999999999999876543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc----
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR----  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----  233 (260)
                      ......          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....+.    
T Consensus       194 ~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  263 (321)
T 2c30_A          194 DVPKRK----------SLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKN  263 (321)
T ss_dssp             SSCCBC----------CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTT
T ss_pred             Cccccc----------cccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCc
Confidence            321110          11112222333333  457889999999999999999988865   33444444332211    


Q ss_pred             --cCCccHHHHHHHHHHhcccccc
Q psy7935         234 --QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 --~~~~~~~~il~~l~~~~~~~r~  255 (260)
                        ..++.+.+++.+|...++..|.
T Consensus       264 ~~~~~~~l~~li~~~l~~dp~~Rp  287 (321)
T 2c30_A          264 SHKVSPVLRDFLERMLVRDPQERA  287 (321)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cccCCHHHHHHHHHHccCChhhCc
Confidence              1234567777777777777775

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=6.3e-34  Score=251.33  Aligned_cols=227  Identities=12%  Similarity=0.116  Sum_probs=166.8

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++  +|+.||+|++....     .........+.+|+.++++++||||+     +.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~-----~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-----IKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHh-----hhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee
Confidence            4456688999999999999999998  48999999865432     11122245688999999999999999     333


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~  334 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAV  334 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccce
Confidence            232222       45555554332 2348899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH-------HHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF-------RDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~-------~~~~~~~~~  229 (260)
                      ........           .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+..       .++...+..
T Consensus       335 ~~~~~~~~-----------~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~  403 (576)
T 2acx_A          335 HVPEGQTI-----------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE  403 (576)
T ss_dssp             ECCTTCCE-----------ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH
T ss_pred             ecccCccc-----------cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc
Confidence            65433211           111222223344433  4578999999999999999999988762       334444433


Q ss_pred             h---ccccCCccHHHHHHHHHHhccccccc
Q psy7935         230 S---YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~---~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .   ++...++.+.+++.+|...++..|..
T Consensus       404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g  433 (576)
T 2acx_A          404 VPEEYSERFSPQARSLCSQLLCKDPAERLG  433 (576)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             ccccCCccCCHHHHHHHHHhccCCHHHcCC
Confidence            2   23334677899999999999999974

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2e-33  Score=227.12  Aligned_cols=217  Identities=14%  Similarity=0.198  Sum_probs=156.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++ .++.||+|.+.....         ..+.+.+|++++++++||||+ ++    +..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   76 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA   76 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            345688899999999999999999 577899998643321         135688999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++...
T Consensus        77 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A           77 PICLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             SCEEEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CeEEEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccc
Confidence            2222       4566666443  235788999999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD------------------  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~------------------  219 (260)
                      .........     .    ..+...+.+|+..  ..+++++|+||+|++++++++ |..|+.                  
T Consensus       155 ~~~~~~~~~-----~----~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~  225 (267)
T 3t9t_A          155 LDDQYTSST-----G----TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLY  225 (267)
T ss_dssp             CCHHHHSTT-----S----TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCC
T ss_pred             ccccccccc-----c----ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCC
Confidence            432111100     0    0011112233332  457889999999999999999 665532                  


Q ss_pred             --------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 --------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                              ..+++.+|+...+.. |+++.++++.|.++..
T Consensus       226 ~~~~~~~~l~~li~~~l~~~p~~-Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          226 KPRLASTHVYQIMNHCWRERPED-RPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             CCccCcHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHHh
Confidence                    446667777655554 5677777777776654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.6e-33  Score=233.83  Aligned_cols=222  Identities=15%  Similarity=0.167  Sum_probs=158.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      +...+.|++.+.||+|+||.||+|++       .+..||+|++.... .      ....+.+.+|+.++.++ +||||+ 
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~------~~~~~~~~~E~~~l~~l~~hp~iv~  113 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-D------SSEREALMSELKMMTQLGSHENIVN  113 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-C------HHHHHHHHHHHHHHHhhcCCCCeee
Confidence            34456688999999999999999997       25689999864321 1      11246789999999999 899999 


Q ss_pred             Ee----CCCchhh-------hhHHHhhccCcc--------------------cccchHHHHHHHHHHHHHHHHHhhhCCc
Q psy7935          83 LD----DVQKSAI-------QTLISNLDSQNI--------------------TRENISDIIKLLSIEIGTTLSVMHSNNI  131 (260)
Q Consensus        83 ~~----~~~~~~~-------~~l~~~l~~~~~--------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i  131 (260)
                      ++    .....++       ++|.+++.....                    ...+++..++.++.|++.||+|||++||
T Consensus       114 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  193 (344)
T 1rjb_A          114 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  193 (344)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            22    2222222       577777754321                    1237889999999999999999999999


Q ss_pred             eecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeeccee
Q psy7935         132 IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQ  208 (260)
Q Consensus       132 ~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~  208 (260)
                      +||||||+|||++.++.+||+|||++...........         .....+.+ +.+|+..  ..+++++|+||+|+++
T Consensus       194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  264 (344)
T 1rjb_A          194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV---------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL  264 (344)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEE---------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             ccCCCChhhEEEcCCCcEEeCCCccCcccccCcccee---------ccCccCccCccCHHHhccCCCChhHhHHHHHHHH
Confidence            9999999999999999999999999976543321110         01111222 3344433  5578999999999999


Q ss_pred             eeecc-cccccc---------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         209 IKVST-EDKAVD---------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       209 ~~~~~-~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      +++++ |..|+.                           +.+++.+|+...+.. |+++.++++.|..+.
T Consensus       265 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          265 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRK-RPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHC
T ss_pred             HHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchh-CcCHHHHHHHHHHHH
Confidence            99998 765432                           456777777755555 677788888777664

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.3e-33  Score=243.65  Aligned_cols=191  Identities=21%  Similarity=0.265  Sum_probs=135.8

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---C-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---Q-   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~-   87 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||||++... .     ......+.+.+|+.++++++||||+ +++.   . 
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~-----~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~   98 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-F-----EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD   98 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-T-----TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-h-----cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC
Confidence            356889999999999999999984  889999986432 1     1222356789999999999999999 3321   1 


Q ss_pred             -----chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 -----KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 -----~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                           ..++      ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        99 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A           99 LLKFDELYIVLEIADSDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             TTTCCCEEEEEECCSEEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCcCCeEEEEEecCCcCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence                 1122      5566665543   3589999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccc--cc----------cccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccc
Q psy7935         157 SQIKVSTEDKAV--DL----------YVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       157 ~~~~~~~~~~~~--d~----------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      ++..........  +.          -.......+..++..+.+|+.+   ..++.++|+||+||+++++++|
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g  248 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM  248 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhc
Confidence            987654321100  00          0000111223333334455532   4588999999999999999974

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.1e-33  Score=231.13  Aligned_cols=224  Identities=14%  Similarity=0.171  Sum_probs=162.1

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~   84 (260)
                      ...+.|.+.+.||+|+||.||+|++.       +..||+|++....       .....+.+.+|+.++++++||||+ ++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~   92 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-------SPSELRDLLSEFNVLKQVNHPHVIKLY   92 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence            34566889999999999999999872       3789999854221       112246789999999999999999 22


Q ss_pred             C----CCchhh-------hhHHHhhccCcc---------------------cccchHHHHHHHHHHHHHHHHHhhhCCce
Q psy7935          85 D----VQKSAI-------QTLISNLDSQNI---------------------TRENISDIIKLLSIEIGTTLSVMHSNNII  132 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~  132 (260)
                      +    ....++       ++|.+++.....                     ...+++..++.++.|++.||+|||++||+
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  172 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV  172 (314)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            2    222222       566666654321                     13488899999999999999999999999


Q ss_pred             ecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceee
Q psy7935         133 HGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQI  209 (260)
Q Consensus       133 H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~  209 (260)
                      ||||||+|||++.++.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++
T Consensus       173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  243 (314)
T 2ivs_A          173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR---------SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW  243 (314)
T ss_dssp             CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECS---------SCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             ccccchheEEEcCCCCEEEccccccccccccccceec---------cCCCCcccccChhhhcCCCcCchhhHHHHHHHHH
Confidence            9999999999999999999999999765433211100         0011112 2233333  45788999999999999


Q ss_pred             eecc-ccccc--------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcccc
Q psy7935         210 KVST-EDKAV--------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       210 ~~~~-~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~  253 (260)
                      ++++ |..|+                          .+.+++.+|+...+.. |+++.++++.|.++..+.
T Consensus       244 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~-Rps~~~l~~~l~~~~~~~  313 (314)
T 2ivs_A          244 EIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDK-RPVFADISKDLEKMMVKR  313 (314)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHTC
T ss_pred             HHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHHhhc
Confidence            9998 65442                          2567888888866665 678888888888775543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=7.4e-35  Score=243.44  Aligned_cols=216  Identities=16%  Similarity=0.184  Sum_probs=155.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +++.||||++..................+.+|+.++++++||||+ +    .+..
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            34588999999999999999998  488999998765543221100111123567899999999999999 2    2222


Q ss_pred             chhh-------h-hHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 KSAI-------Q-TLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 ~~~~-------~-~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ..++       + +|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~  179 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY  179 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence            2222       2 666666554   2589999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--c-cccccceeEeecceeeeecccccccc-----------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--Q-SYNHHLVMIDFGLSQIKVSTEDKAVD-----------------  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~di~s~g~~~~~~~~~~~~~~-----------------  219 (260)
                      .......           ....+...+.+|+..  . ..++++|+||+|++++++++|..|+.                 
T Consensus       180 ~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  248 (335)
T 3dls_A          180 LERGKLF-----------YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVS  248 (335)
T ss_dssp             CCTTCCB-----------CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTTTCCCCSSCCC
T ss_pred             CCCCCce-----------eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHhhccCCCcccC
Confidence            5443211           111122223344433  2 23788999999999999999987642                 


Q ss_pred             --HHHHHHHHHhhccccCCccHHHHHHH
Q psy7935         220 --FRDMFNWILSSYRRQNRKQFETVMKT  245 (260)
Q Consensus       220 --~~~~~~~~~~~~~~~~~~~~~~il~~  245 (260)
                        +.+++.+|+...+.. |+++.++++.
T Consensus       249 ~~l~~li~~~L~~dP~~-Rps~~ell~h  275 (335)
T 3dls_A          249 KELMSLVSGLLQPVPER-RTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHHHHHTCSSGGG-SCCHHHHHHC
T ss_pred             HHHHHHHHHHccCChhh-CcCHHHHhcC
Confidence              566777777755554 5666666653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.1e-33  Score=247.15  Aligned_cols=228  Identities=14%  Similarity=0.155  Sum_probs=168.8

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..+.|+..+.||+|+||.||+|++  +|+.||+|++....     .........+.+|+.++++++||||+     +.+.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~-----~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~  257 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR-----LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK  257 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH-----hhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC
Confidence            446688899999999999999998  48999999864332     11112245788999999999999999     3333


Q ss_pred             Cchhh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...++       ++|.+++..... ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV  337 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceee
Confidence            33222       455555533211 2358899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------HHHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~~  229 (260)
                      .........          .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.       ..++...++.
T Consensus       338 ~~~~~~~~~----------~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~  407 (543)
T 3c4z_A          338 ELKAGQTKT----------KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLE  407 (543)
T ss_dssp             ECCTTCCCB----------CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHH
T ss_pred             eccCCCccc----------ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhh
Confidence            654332111          011122223344433  457899999999999999999998875       3556666665


Q ss_pred             hc---cccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SY---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..   +...++.+.+++.+|...++..|..
T Consensus       408 ~~~~~p~~~s~~~~~li~~lL~~dP~~R~~  437 (543)
T 3c4z_A          408 QAVTYPDKFSPASKDFCEALLQKDPEKRLG  437 (543)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cccCCCcccCHHHHHHHHHhccCCHhHCCC
Confidence            43   3344678899999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=5.6e-34  Score=235.74  Aligned_cols=222  Identities=18%  Similarity=0.168  Sum_probs=152.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC----CC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD----VQ   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~----~~   87 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++.... ...     ........|+..+.++ +||||+ +++    ..
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~-----~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF-RGP-----KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC-CSH-----HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc-cCh-----HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence            45888999999999999999994  8999999754322 111     1234455666666555 899999 222    22


Q ss_pred             chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++      ++|.+++...  ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||++....
T Consensus       131 ~~~lv~e~~~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          131 ILYLQTELCGPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             EEEEEEECCCCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             EEEEEEeccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            2222      4555554433  2358999999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccccccccHHHHHHHHHhhc-----cccC
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY-----RRQN  235 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  235 (260)
                      .......           ..++..+.+|+.. +.++.++|+||+|++++++++|..++...+..+.+..+.     +...
T Consensus       209 ~~~~~~~-----------~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (311)
T 3p1a_A          209 TAGAGEV-----------QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGL  277 (311)
T ss_dssp             ------C-----------CCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTS
T ss_pred             cCCCCcc-----------cCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCC
Confidence            3321110           0011112233322 457889999999999999999976665444444444332     2233


Q ss_pred             CccHHHHHHHHHHhccccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++.+.+++.+|...++..|..
T Consensus       278 ~~~l~~li~~~L~~dP~~Rpt  298 (311)
T 3p1a_A          278 SSELRSVLVMMLEPDPKLRAT  298 (311)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCC
T ss_pred             CHHHHHHHHHHcCCChhhCcC
Confidence            566777888887777777753

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.8e-33  Score=246.10  Aligned_cols=223  Identities=17%  Similarity=0.208  Sum_probs=163.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||||++.........     ....+.+|+.++++++||||+ ++    +..
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   99 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT-----DKESLLREVQLLKQLDHPNIMKLYEFFEDKG   99 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSS-----CHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccch-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            45688999999999999999998  4899999987654332221     246789999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE---ccCCcEEEEeeccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill---~~~~~~kl~DFg~~  157 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||+   +.++.+||+|||++
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             EEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            2222       4555555443   358899999999999999999999999999999999999   45789999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ..........           ...++..+.+|+.. +.+++++|+||+|++++++++|..|+.   ..+....+..+.. 
T Consensus       177 ~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  245 (484)
T 3nyv_A          177 THFEASKKMK-----------DKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT  245 (484)
T ss_dssp             HHBCCCCSHH-----------HHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             EEcccccccc-----------cCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC
Confidence            7654432111           00111122233322 457889999999999999999998876   4555565555432 


Q ss_pred             ------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ...++.+.+++.+|...++..|..
T Consensus       246 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s  275 (484)
T 3nyv_A          246 FELPQWKKVSESAKDLIRKMLTYVPSMRIS  275 (484)
T ss_dssp             CCSGGGGGSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCcccccCCHHHHHHHHHHCCCChhHCcC
Confidence                  223456788888888888888864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=4.3e-34  Score=246.19  Aligned_cols=221  Identities=11%  Similarity=0.129  Sum_probs=158.0

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.||+|++....     .........+.+|..++..++||||+     +.+.
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~  146 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDSKWITTLHYAFQDD  146 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-----hhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence            3456889999999999999999984  7899999864321     11111123478899999999999999     3333


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       147 ~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          147 NNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  224 (437)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence            33222       5566666442  24589999999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      .........         ....++..+.+|+..       ..++.++|+||+|++++++++|..|+.   ..+....++.
T Consensus       225 ~~~~~~~~~---------~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  295 (437)
T 4aw2_A          225 LMEDGTVQS---------SVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  295 (437)
T ss_dssp             CCTTSCEEC---------CSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             cccCCCccc---------ccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence            543321110         011122223344433       357889999999999999999999986   4556666554


Q ss_pred             hc-----cc---cCCccHHHHHHHHHHhc
Q psy7935         230 SY-----RR---QNRKQFETVMKTFAEVE  250 (260)
Q Consensus       230 ~~-----~~---~~~~~~~~il~~l~~~~  250 (260)
                      ..     +.   ..++.+.+++++|....
T Consensus       296 ~~~~~~~p~~~~~~s~~~~dLi~~lL~~~  324 (437)
T 4aw2_A          296 HKERFQFPTQVTDVSENAKDLIRRLICSR  324 (437)
T ss_dssp             HHHHCCCCSSCCCSCHHHHHHHHTTSSCG
T ss_pred             ccccccCCcccccCCHHHHHHHHHHhccc
Confidence            21     21   13566778888776443

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=8.6e-34  Score=236.25  Aligned_cols=183  Identities=21%  Similarity=0.272  Sum_probs=138.4

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-E----eC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-L----DD   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~----~~   85 (260)
                      ..+.|++.+.||+|+||.||+|++  +++.||||++....           .+.+.+|+.++++++ ||||+ +    .+
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~  102 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIVKD  102 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----------hHHHHHHHHHHHHcCCCCCEEEeeeeecc
Confidence            345689999999999999999998  48999999864211           356889999999997 99999 2    22


Q ss_pred             CCchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeeccccccc
Q psy7935          86 VQKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFGLSQIKV  161 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg~~~~~~  161 (260)
                      ......+.+++++.+..+   ...+++..+..++.|++.||+|||++||+||||||+|||++.++ .+||+|||++....
T Consensus       103 ~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          103 PVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             TTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             CCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            223333445666655433   23478889999999999999999999999999999999999766 89999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ......           ...+...+.+|+..   ..++.++|+||+|++++++++|..|+
T Consensus       183 ~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~  231 (330)
T 3nsz_A          183 PGQEYN-----------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF  231 (330)
T ss_dssp             TTCCCC-----------SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             CCCccc-----------cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence            432211           11112222333333   45788999999999999999999887

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.2e-33  Score=231.86  Aligned_cols=222  Identities=15%  Similarity=0.135  Sum_probs=158.6

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++.....          ...+.+|+.+++.++|++++    .+...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~   76 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWCGAE   76 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----------CCHHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----------hhHHHHHHHHHHHhhcCCCCCccccccCC
Confidence            346688999999999999999997  489999998654321          13478899999999988766    22111


Q ss_pred             chh--h------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc---cCCcEEEEeecc
Q psy7935          88 KSA--I------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS---SDHHLVMIDFGL  156 (260)
Q Consensus        88 ~~~--~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~---~~~~~kl~DFg~  156 (260)
                      ...  +      ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        77 ~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  154 (296)
T 3uzp_A           77 GDYNVMVMELLGPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  154 (296)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred             CCceEEEEEecCCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCC
Confidence            111  1      5566666432  23588999999999999999999999999999999999994   789999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---------------  219 (260)
                      +.............+...   ....+...+.+|+..  ..+++++|+||+|++++++++|..|+.               
T Consensus       155 ~~~~~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  231 (296)
T 3uzp_A          155 AKKYRDARTHQHIPYREN---KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS  231 (296)
T ss_dssp             CEECBCTTTCCBCCCCCS---CCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred             cccccccccccccccccc---cccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence            987655432211111000   011122222333333  357889999999999999999887642               


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                        +.+++.+|+...+.. |+++.++++.|.++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~l~~~~~  280 (296)
T 3uzp_A          232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDD-KPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTC-CCCHHHHHHHHHHHHH
T ss_pred             ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCc-CCCHHHHHHHHHHHHH
Confidence                              456777777755555 5677888887776643

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-33  Score=237.99  Aligned_cols=220  Identities=15%  Similarity=0.131  Sum_probs=159.2

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|.+.  |+.||+|++....        ......+.+|+.++++++||||+ +    .+...
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--------~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--------PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--------hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCE
Confidence            45889999999999999999984  8899999864321        11245788999999999999999 2    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEeeccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~~  159 (260)
                      .++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.  ++.+||+|||++..
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEeccccee
Confidence            222       4565655433  235889999999999999999999999999999999999974  57899999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-  233 (260)
                      .......           ....++..+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+...... 
T Consensus       201 ~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~  269 (387)
T 1kob_A          201 LNPDEIV-----------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF  269 (387)
T ss_dssp             CCTTSCE-----------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             cCCCcce-----------eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            5433211           111122223334333  457889999999999999999988876   34444444443221 


Q ss_pred             ------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ..++.+.+++.+|...++..|..
T Consensus       270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  298 (387)
T 1kob_A          270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLT  298 (387)
T ss_dssp             CSSTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CccccccCCHHHHHHHHHHcCCChhHCcC
Confidence                  23456678888887777777754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.1e-33  Score=228.53  Aligned_cols=211  Identities=18%  Similarity=0.265  Sum_probs=153.0

Q ss_pred             cccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCch
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKS   89 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~   89 (260)
                      ..+.|++.+.||+|+||.||+|+++|+.||+|++....          ..+.+.+|+.++++++||||+ +++   ....
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   88 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECCC--
T ss_pred             ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC
Confidence            34668999999999999999999999999999854221          145788999999999999999 322   1221


Q ss_pred             hh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          90 AI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..         ++|.+++.... ...+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++...
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  167 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA  167 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----
T ss_pred             ceEEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccc
Confidence            22         46666665432 223788889999999999999999999999999999999999999999999998754


Q ss_pred             cccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc------------------
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV------------------  218 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~------------------  218 (260)
                      .......              .+.+ +.+|+..  ..+++++|+||+|++++++++ |..|+                  
T Consensus       168 ~~~~~~~--------------~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~  233 (278)
T 1byg_A          168 SSTQDTG--------------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM  233 (278)
T ss_dssp             ----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC
T ss_pred             cccccCC--------------CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC
Confidence            4322110              1112 2233333  457889999999999999998 66543                  


Q ss_pred             --------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 --------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 --------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                              ...+++.+|+...+.. |+++.++++.|.++.
T Consensus       234 ~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          234 DAPDGCPPAVYEVMKNCWHLDAAM-RPSFLQLREQLEHIK  272 (278)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhcCChhh-CCCHHHHHHHHHHHH
Confidence                    2557778888766665 578888888887765

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.6e-33  Score=236.64  Aligned_cols=219  Identities=16%  Similarity=0.180  Sum_probs=148.5

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..++|++.+.||+|+||.||+|++.  ++.||||++....          ..+.+.+|+.++.+++||||+     +.+.
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  120 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----------DKKIVRTEIGVLLRLSHPNIIKLKEIFETP  120 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECS
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----------hHHHHHHHHHHHHhCCCCCCcceeeeEecC
Confidence            3456888999999999999999994  7889999864321          135678899999999999999     2222


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeecc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGL  156 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~  156 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       121 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~  197 (349)
T 2w4o_A          121 TEISLVLELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGL  197 (349)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-
T ss_pred             CeEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcc
Confidence            22222       4566666543   35889999999999999999999999999999999999975   89999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc----HHHHHHHHHhh
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSS  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~  230 (260)
                      +.........           ....+...+.+|+..  ..+++++|+||+|++++++++|..|+.    .......+...
T Consensus       198 a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~  266 (349)
T 2w4o_A          198 SKIVEHQVLM-----------KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC  266 (349)
T ss_dssp             --------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTT
T ss_pred             ccccCccccc-----------ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhC
Confidence            8765432111           011112222333333  357889999999999999999988875    23345555443


Q ss_pred             cc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         231 YR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..       ...++.+.+++.+|...++..|..
T Consensus       267 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  299 (349)
T 2w4o_A          267 EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT  299 (349)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCccCCchhhhCCHHHHHHHHHHccCChhhCcC
Confidence            22       223456778888888888888864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.3e-33  Score=227.75  Aligned_cols=218  Identities=15%  Similarity=0.179  Sum_probs=156.9

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----E
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----L   83 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~   83 (260)
                      ...+.|.+.+.||+|+||.||+|++.     +..||+|.+....       .....+.+.+|+.++++++||||+    +
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   81 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-------TLDNKEKFMSEAVIMKNLDHPHIVKLIGI   81 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-------CHHHHHHHHHHHHHHHHHCCTTBCCEEEE
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-------CchHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            34566889999999999999999974     2359999854321       112346789999999999999999    2


Q ss_pred             eCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          84 DDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        84 ~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      ......++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        82 ~~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  159 (281)
T 3cc6_A           82 IEEEPTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL  159 (281)
T ss_dssp             ECSSSCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCG
T ss_pred             EcCCCCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCC
Confidence            22222222       4566665432  23478889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc-------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-------------  219 (260)
                      +...........          ....+.+ +.+|+..  ..+++++|+||+|++++++++ |..|+.             
T Consensus       160 ~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~  229 (281)
T 3cc6_A          160 SRYIEDEDYYKA----------SVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEK  229 (281)
T ss_dssp             GGCC-------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHH
T ss_pred             Cccccccccccc----------ccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhc
Confidence            976544321110          0011112 2333333  457889999999999999998 776542             


Q ss_pred             -------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                   ..+++.+|+...+.. |+++.++++.|.++.
T Consensus       230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          230 GDRLPKPDLCPPVLYTLMTRCWDYDPSD-RPRFTELVCSLSDVY  272 (281)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCCchh-CcCHHHHHHHHHHHH
Confidence                         567778888766665 578888888887664

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.9e-33  Score=246.07  Aligned_cols=222  Identities=18%  Similarity=0.180  Sum_probs=159.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||||++........      ....+.+|++++++++||||+ ++    +..
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   94 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK------DTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch------HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC
Confidence            356889999999999999999984  89999998654322111      245788999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeeccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~  157 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.   ++.+||+|||++
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            2222       4454444332   35889999999999999999999999999999999999954   668999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR  233 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  233 (260)
                      ..........           ...+...+.+|+.. +.+++++|+||+|++++++++|..|+.   ..+....+..+...
T Consensus       172 ~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  240 (486)
T 3mwu_A          172 TCFQQNTKMK-----------DRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA  240 (486)
T ss_dssp             TTBCCC---------------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             eECCCCCccC-----------CCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            7654332111           01111122233333 457889999999999999999998875   45555555554322


Q ss_pred             -------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ..++.+.+++.+|...++..|..
T Consensus       241 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  270 (486)
T 3mwu_A          241 FDLPQWRTISDDAKDLIRKMLTFHPSLRIT  270 (486)
T ss_dssp             SCSGGGGGSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CCCcccCCCCHHHHHHHHHHcCCChhhCcC
Confidence                   22455678888888777777754

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=1.7e-33  Score=236.16  Aligned_cols=203  Identities=13%  Similarity=0.087  Sum_probs=135.8

Q ss_pred             eccccccccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCc---hhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHP---KLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~---~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      +.....+.|++.+.||+|+||.||+|++     .+..+|+|+.........   ..........+.+|+..+..++||||
T Consensus        31 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni  110 (345)
T 2v62_A           31 LDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGI  110 (345)
T ss_dssp             EECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred             eccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCc
Confidence            3445567799999999999999999998     468999998654321000   01111123457788899999999999


Q ss_pred             E-EeCCC------chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          82 C-LDDVQ------KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        82 ~-~~~~~------~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                      + +++..      ....        ++|.+++....   .+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~  187 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK  187 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS
T ss_pred             ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC
Confidence            9 33221      1222        55666665432   68999999999999999999999999999999999999987


Q ss_pred             C--cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc
Q psy7935         147 H--HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       147 ~--~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      +  .+||+|||+++..........  +.. .......+...+.+|+..  ..++.++|+||+|++++++++|..|+
T Consensus       188 ~~~~~kL~Dfg~a~~~~~~~~~~~--~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf  260 (345)
T 2v62_A          188 NPDQVYLADYGLSYRYCPNGNHKQ--YQE-NPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW  260 (345)
T ss_dssp             STTSEEECCCTTCEESSGGGCCCC--CCC-CGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             CCCcEEEEeCCCceeccccccccc--chh-ccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence            7  999999999977643321110  000 000111122223333333  35789999999999999999998887

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4e-33  Score=230.41  Aligned_cols=217  Identities=13%  Similarity=0.162  Sum_probs=146.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  ++.||+|++.....     ......+.+.+|+.++++++||||+ +++    ...
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-----SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-----GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-----cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            55899999999999999999984  88999998643321     1222356789999999999999999 322    222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             EEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            222       4566665443   258889999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc--------------------
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD--------------------  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~--------------------  219 (260)
                      .......         ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.                    
T Consensus       186 ~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (309)
T 2h34_A          186 DEKLTQL---------GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPST  256 (309)
T ss_dssp             --------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGG
T ss_pred             ccccccc---------cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccc
Confidence            3321110         011111222333333  457889999999999999999987754                    


Q ss_pred             --------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 --------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 --------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                              +.+++.+|+...+..++.++.++++.+...
T Consensus       257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~  294 (309)
T 2h34_A          257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAA  294 (309)
T ss_dssp             TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHT
T ss_pred             cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHH
Confidence                    334555555555555444555555555543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=2e-33  Score=229.55  Aligned_cols=230  Identities=17%  Similarity=0.168  Sum_probs=159.1

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee-
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD-   84 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~-   84 (260)
                      .......+.|++.+.||+|+||.||+|++.  +..+|+|.+.......       ..+.+.+|++++++++||||+ ++ 
T Consensus        15 ~~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~E~~~l~~l~hp~iv~~~~   87 (285)
T 3is5_A           15 YFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV-------PMEQIEAEIEVLKSLDHPNIIKIFE   87 (285)
T ss_dssp             EESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS-------CHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CCCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch-------hHHHHHHHHHHHHhCCCchHHhHHH
Confidence            334445567899999999999999999984  8899999865433211       246788999999999999999 22 


Q ss_pred             ---CCCchhh-------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc---cCCcEE
Q psy7935          85 ---DVQKSAI-------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS---SDHHLV  150 (260)
Q Consensus        85 ---~~~~~~~-------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~---~~~~~k  150 (260)
                         +....++       ++|.+++.... ....+++..++.++.|++.||+|||++||+||||||+|||++   .++.+|
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~k  167 (285)
T 3is5_A           88 VFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIK  167 (285)
T ss_dssp             EEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEE
T ss_pred             heecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEE
Confidence               2222222       34555443211 024588999999999999999999999999999999999994   468899


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHH
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNW  226 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~  226 (260)
                      |+|||++..........           ...+...+.+|+.. ..++.++|+||+|++++++++|..|+.   ..+....
T Consensus       168 l~Dfg~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~  236 (285)
T 3is5_A          168 IIDFGLAELFKSDEHST-----------NAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK  236 (285)
T ss_dssp             ECCCCCCCC---------------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             EEeeecceecCCcccCc-----------CcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh
Confidence            99999997654332111           00111112222222 457889999999999999999998876   3444444


Q ss_pred             HHhhcccc------CCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSYRRQ------NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~~~~------~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .....+..      .++.+.+++.+|...++..|..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  272 (285)
T 3is5_A          237 ATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPS  272 (285)
T ss_dssp             HHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCC
T ss_pred             hccCCcccccccCcCCHHHHHHHHHHccCChhhCcC
Confidence            43322211      2456778888888888888764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2e-33  Score=248.34  Aligned_cols=219  Identities=16%  Similarity=0.173  Sum_probs=157.4

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DD   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~   85 (260)
                      ++...+.|++.+.||+|+||.||+|++. +..||||++.....         ..+.+.+|+.++++++|+||+ +   +.
T Consensus       262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~hpniv~~~~~~~  332 (535)
T 2h8h_A          262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVS  332 (535)
T ss_dssp             SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC---------CHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            3455667889999999999999999996 56899998653321         135789999999999999999 2   22


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++.... ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus       333 ~~~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  411 (535)
T 2h8h_A          333 EEPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR  411 (535)
T ss_dssp             SSSCEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred             eccceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence            222222       56666665422 2358889999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~----------------  219 (260)
                      ...........         ...+...+.+|+..  ..++.++|+||||++++++++ |..|+.                
T Consensus       412 ~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~  482 (535)
T 2h8h_A          412 LIEDNEYTARQ---------GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR  482 (535)
T ss_dssp             TCCCHHHHTTC---------STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred             ecCCCceeccc---------CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            65432110000         00001112233333  457889999999999999999 665542                


Q ss_pred             ----------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ----------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                +.+++.+|+...+.. |+++.++++.|.++
T Consensus       483 ~~~~~~~~~~l~~li~~cl~~dP~~-RPt~~~l~~~L~~~  521 (535)
T 2h8h_A          483 MPCPPECPESLHDLMCQCWRKEPEE-RPTFEYLQAFLEDY  521 (535)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHTS
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHH
Confidence                      445666666655554 56667777766655

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.8e-33  Score=244.53  Aligned_cols=229  Identities=15%  Similarity=0.169  Sum_probs=160.0

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCch-----hhHHHHHHHHHHHHhhhcccCCCCeE-E--
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPK-----LDEALTKERITSEIRGLMKCRMADIC-L--   83 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h~~i~-~--   83 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.||+|++.........     .......+.+.+|+.++++++||||+ +  
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3466899999999999999999984  789999997654432110     00011246789999999999999999 2  


Q ss_pred             --eCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---cEEE
Q psy7935          84 --DDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---HLVM  151 (260)
Q Consensus        84 --~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---~~kl  151 (260)
                        .+....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++   .+||
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEE
Confidence              22222222       3444444332   3588999999999999999999999999999999999999865   7999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHH
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWI  227 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~  227 (260)
                      +|||++..........           ...++..+.+|+.. ..+++++|+||+|++++++++|..|+.   ..+++..+
T Consensus       191 ~Dfg~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  259 (504)
T 3q5i_A          191 VDFGLSSFFSKDYKLR-----------DRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV  259 (504)
T ss_dssp             CCCTTCEECCTTSCBC-----------CCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             EECCCCEEcCCCCccc-----------cccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999997664432111           11112222233333 457889999999999999999998876   55666665


Q ss_pred             Hhhcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..       ...++.+.+++.+|...++..|..
T Consensus       260 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t  295 (504)
T 3q5i_A          260 EKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCT  295 (504)
T ss_dssp             HHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCC
Confidence            55432       223566788888888888877764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-33  Score=238.11  Aligned_cols=225  Identities=12%  Similarity=0.081  Sum_probs=157.5

Q ss_pred             eccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC   82 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~   82 (260)
                      +.+...+.|++.+.||+|+||.||+|++.       +..||||++....       .......+.+|+.++++++||||+
T Consensus        65 ~~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpnIv  137 (367)
T 3l9p_A           65 LKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-------SEQDELDFLMEALIISKFNHQNIV  137 (367)
T ss_dssp             SCBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-------CHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             hhhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-------ChhhHHHHHHHHHHHHhCCCCCCC
Confidence            34455677899999999999999999952       5689999853211       111245688999999999999999


Q ss_pred             -E----eCCCchhh-------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC
Q psy7935          83 -L----DDVQKSAI-------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        83 -~----~~~~~~~~-------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~  146 (260)
                       +    .+....++       ++|.+++.....    ...+++..++.++.|++.||+|||++||+||||||+|||++.+
T Consensus       138 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  217 (367)
T 3l9p_A          138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCP  217 (367)
T ss_dssp             CEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCS
T ss_pred             eEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecC
Confidence             2    22222222       466666654321    2358889999999999999999999999999999999999954


Q ss_pred             ---CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc-
Q psy7935         147 ---HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD-  219 (260)
Q Consensus       147 ---~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~-  219 (260)
                         ..+||+|||+++............        ...+...+.+|+..  ..++.++|+||+|++++++++ |..|+. 
T Consensus       218 ~~~~~~kL~DFG~a~~~~~~~~~~~~~--------~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~  289 (367)
T 3l9p_A          218 GPGRVAKIGDFGMARDIYRAGYYRKGG--------CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS  289 (367)
T ss_dssp             STTCCEEECCCHHHHHHHHHSSCTTCC--------GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CCCceEEECCCccccccccccccccCC--------CcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence               459999999997543322111000        00011112233332  557889999999999999998 654432 


Q ss_pred             -------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 -------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 -------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                               +.+++.+|+...+.. |+++.++++.+..+.
T Consensus       290 ~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          290 KSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED-RPNFAIILERIEYCT  344 (367)
T ss_dssp             CCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhH-CcCHHHHHHHHHHHh
Confidence                                     456777777766655 567788887776554

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-33  Score=233.22  Aligned_cols=219  Identities=15%  Similarity=0.167  Sum_probs=155.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++      +++.||||++....        ....+.+.+|+.++++++||||+ +.+
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~  109 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--------EEHLRDFEREIEILKSLQHDNIVKYKG  109 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--------SHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--------HHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            3455688999999999999999985      48899999864321        11246789999999999999999 322


Q ss_pred             ----CCchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          86 ----VQKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        86 ----~~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                          .....+         ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+
T Consensus       110 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~  187 (326)
T 2w1i_A          110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG  187 (326)
T ss_dssp             EECC----CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC
T ss_pred             EEEecCCCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEe
Confidence                221122         4666666543  2347888999999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccccc----------
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD----------  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~----------  219 (260)
                      |||++............        .....+.. +.+|+..  ..++.++|+||+|+++++++++..|+.          
T Consensus       188 Dfg~~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~  259 (326)
T 2w1i_A          188 DFGLTKVLPQDKEYYKV--------KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI  259 (326)
T ss_dssp             CCTTCEECCSSCSEEEC--------SSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH
T ss_pred             cCcchhhcccccccccc--------ccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh
Confidence            99999776443211000        00111111 2233333  457889999999999999999754432          


Q ss_pred             --------------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 --------------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 --------------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                                      +.+++.+|+...+.. |+++.++++.|..+.
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          260 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQ-RPSFRDLALRVDQIR  321 (326)
T ss_dssp             CTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             ccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                                            445666666655554 566777777776654

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.9e-33  Score=234.65  Aligned_cols=219  Identities=18%  Similarity=0.231  Sum_probs=151.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~   88 (260)
                      .+.|++.+.||+|+||.||+|.+  +|+.||||++.... .     .....+.+.+|+.+++.++||||+    ++....
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~   97 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-Q-----SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE   97 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-S-----SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-c-----CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence            35688999999999999999998  48999999853321 1     122356789999999999999999    222211


Q ss_pred             -------hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          89 -------SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        89 -------~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                             .++      ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A           98 TLDDFTDFYLVMPFMGTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             ccccCceEEEEEecCCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeee
Confidence                   111      4455555432    47889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      +++.......             ...++..+.+|+..   ..++.++|+||+|++++++++|+.|+.   ..+.+..+..
T Consensus       174 ~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~  240 (367)
T 1cm8_A          174 LARQADSEMT-------------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK  240 (367)
T ss_dssp             TCEECCSSCC-------------SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cccccccccC-------------cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            9976543211             11112223344433   357899999999999999999988875   2222222221


Q ss_pred             h----------------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         230 S----------------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~----------------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .                                  .....++.+.+++.+|...++..|..
T Consensus       241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t  301 (367)
T 1cm8_A          241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT  301 (367)
T ss_dssp             HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC
Confidence            1                                  01122456788888888888888864

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=5.7e-33  Score=234.63  Aligned_cols=227  Identities=15%  Similarity=0.158  Sum_probs=163.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee----CCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD----DVQ   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~----~~~   87 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++................+.+.+|+.++.++ +||||+ ++    ...
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            34778899999999999999984  89999998765443322222333356788999999999 799999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++..   ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            2222       344444432   235888999999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      .......           ...+...+.+|+..        ..++.++|+||+|++++++++|..|+.   .......+..
T Consensus       251 ~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~  319 (365)
T 2y7j_A          251 EPGEKLR-----------ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME  319 (365)
T ss_dssp             CTTCCBC-----------CCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCCcccc-----------cCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            4332111           11111122233322        247889999999999999999998875   3444444444


Q ss_pred             hccc-------cCCccHHHHHHHHHHhccccccc
Q psy7935         230 SYRR-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~~~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +...       ..++.+.+++.+|...++..|..
T Consensus       320 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  353 (365)
T 2y7j_A          320 GQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT  353 (365)
T ss_dssp             TCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC
Confidence            3221       23455788999999888888864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.4e-33  Score=237.03  Aligned_cols=193  Identities=18%  Similarity=0.223  Sum_probs=139.0

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +|+.||+|++........      ....+.+|+.++++++||||+ +++.    .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   89 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG------FPITALREIKILQLLKHENVVNLIEICRTKA   89 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS------SCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc------chHHHHHHHHHHHhccCCCcccHhheeeccc
Confidence            35689999999999999999998  488999998654432211      134578899999999999999 3221    1


Q ss_pred             ------chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          88 ------KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        88 ------~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                            ...++.+++|+.+...      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           90 SPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             -------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             cccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccch
Confidence                  1122334444432110      2358899999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++.............      .....+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       170 ~a~~~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  230 (351)
T 3mi9_A          170 LARAFSLAKNSQPNR------YTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ  230 (351)
T ss_dssp             TCEECCCCSSSSCCC------CCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             hcccccccccccccc------cCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCC
Confidence            997664332211110      0111122223344433   347889999999999999999988765

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.7e-33  Score=236.27  Aligned_cols=219  Identities=17%  Similarity=0.126  Sum_probs=151.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||++++  +++.||||++......         .+.+.+|+.++++++||||+ +    .+..
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   89 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI---------DENVQREIINHRSLRHPNIVRFKEVILTPT   89 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS---------CHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc---------cHHHHHHHHHHHhCCCCCCCcEEEEEeeCC
Confidence            45699999999999999999999  4889999986532211         24578999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc--EEEEeecccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH--LVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~--~kl~DFg~~~  158 (260)
                      ..++       ++|.+++..   ...+++..++.++.|++.||+|||++||+||||||+|||++.++.  +||+|||+++
T Consensus        90 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           90 HLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK  166 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-
T ss_pred             EEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccc
Confidence            2222       345554433   235889999999999999999999999999999999999987655  9999999986


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccc-cccceeEeecceeeeecccccccc-------HHHHHHHHH
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSY-NHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNWIL  228 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~~~  228 (260)
                      ........           ....++..+.+|+..  ..+ ..++|+||+|++++++++|..|+.       ....+..+.
T Consensus       167 ~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~  235 (361)
T 3uc3_A          167 SSVLHSQP-----------KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL  235 (361)
T ss_dssp             -------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHH
T ss_pred             cccccCCC-----------CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence            43222111           011122223344433  233 344899999999999999998875       234444444


Q ss_pred             hhccc-----cCCccHHHHHHHHHHhccccccc
Q psy7935         229 SSYRR-----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~~~~-----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .....     ..++.+.+++.+|...++..|..
T Consensus       236 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps  268 (361)
T 3uc3_A          236 SVKYSIPDDIRISPECCHLISRIFVADPATRIS  268 (361)
T ss_dssp             TTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC
T ss_pred             cCCCCCCCcCCCCHHHHHHHHHHccCChhHCcC
Confidence            43211     12456677888887777777753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.4e-33  Score=228.16  Aligned_cols=218  Identities=17%  Similarity=0.197  Sum_probs=153.4

Q ss_pred             cccccCcce-eeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          14 SDMVLQPAE-CFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        14 ~~~~~~~~~-~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      ..+.|++.+ .||+|+||.||+|.+.    ++.||||++.....      .....+.+.+|+.++++++||||+ +++  
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   87 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN------DPALKDELLAEANVMQQLDNPYIVRMIGIC   87 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            345677777 9999999999999752    67899998643321      112246799999999999999999 222  


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  164 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS  164 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence             222222       5666666543   25888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      ............        .....+.+ +.+|+..  ..+++++|+||+|++++++++ |..|+.              
T Consensus       165 ~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  236 (291)
T 1xbb_A          165 KALRADENYYKA--------QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG  236 (291)
T ss_dssp             EECCTTCSEEEC------------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred             eeeccCCCcccc--------cccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            765443221100        00111112 2233333  457789999999999999998 766542              


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                  +.+++.+|+...+.. |+++.++++.|.++
T Consensus       237 ~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          237 ERMGCPAGCPREMYDLMNLCWTYDVEN-RPGFAAVELRLRNY  277 (291)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSTTT-SCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHH
Confidence                        456666666655544 56666666666654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.2e-34  Score=237.45  Aligned_cols=232  Identities=18%  Similarity=0.182  Sum_probs=158.8

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  ++.||+|++.......   ......+.+.+|+.++++++||||+     +.+...
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ---INPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcc---cCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            45888999999999999999984  7899999865432111   0112346789999999999999999     222222


Q ss_pred             hhh-------hhHHHhhccC-------------------------------------cccccchHHHHHHHHHHHHHHHH
Q psy7935          89 SAI-------QTLISNLDSQ-------------------------------------NITRENISDIIKLLSIEIGTTLS  124 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~-------------------------------------~~~~~~~~~~~~~i~~~i~~~l~  124 (260)
                      .++       ++|.+++...                                     .....+++..++.++.|++.||+
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            222       4555555310                                     00123478888999999999999


Q ss_pred             HhhhCCceecCCCCCcEEEccCC--cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc----cccccc
Q psy7935         125 VMHSNNIIHGDLTTSNMILSSDH--HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHH  198 (260)
Q Consensus       125 ~LH~~~i~H~dlkp~Nill~~~~--~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~  198 (260)
                      |||++||+||||||+|||++.++  .+||+|||++..........  .+...    ...+...+.+|+..    ..++++
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE--YYGMT----TKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccc--ccccc----ccCCCccccCchhhccCCCCCCcH
Confidence            99999999999999999998766  89999999997654322111  00000    11112222333333    457889


Q ss_pred             ceeEeecceeeeecccccccc---HHHHHHHHHhhcccc-------CCccHHHHHHHHHHhccccccc
Q psy7935         199 LVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRRQ-------NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       199 ~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +|+||+|++++++++|..|+.   ..+...+++......       .++.+.+++.+|...++..|..
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps  324 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD  324 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence            999999999999999998875   444555554433211       2456788888888888887764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.8e-33  Score=228.12  Aligned_cols=214  Identities=14%  Similarity=0.148  Sum_probs=157.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--C-------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--G-------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~   82 (260)
                      ....+.|++.+.||+|+||.||+|++.  +       .+||+|++....        ....+.+.+|+.++++++||||+
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv   75 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--------RNYSESFFEAASMMSKLSHKHLV   75 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--------GGGHHHHHHHHHHHHTSCCTTBC
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--------HHHHHHHHHHHHHHHhCCCCCEe
Confidence            345667899999999999999999974  3       469999853211        12246789999999999999999


Q ss_pred             -Ee----CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc--
Q psy7935          83 -LD----DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH--  148 (260)
Q Consensus        83 -~~----~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~--  148 (260)
                       ++    +....++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.  
T Consensus        76 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~  153 (289)
T 4fvq_A           76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRK  153 (289)
T ss_dssp             CEEEEECCTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGG
T ss_pred             EEEEEEEeCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccc
Confidence             22    2222222       4666666543  234888999999999999999999999999999999999999877  


Q ss_pred             ------EEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccc--
Q psy7935         149 ------LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKA--  217 (260)
Q Consensus       149 ------~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~--  217 (260)
                            +||+|||++..........              +...+.+|+..   ..+++++|+||+|++++++++|..|  
T Consensus       154 ~~~~~~~kl~Dfg~~~~~~~~~~~~--------------~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~  219 (289)
T 4fvq_A          154 TGNPPFIKLSDPGISITVLPKDILQ--------------ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL  219 (289)
T ss_dssp             GTBCCEEEECCCCSCTTTSCHHHHH--------------HTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             ccccceeeeccCcccccccCccccC--------------CcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCc
Confidence                  9999999986553321100              01112233322   4478899999999999999996432  


Q ss_pred             -----------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 -----------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                             ..+.+++.+|+...+.. |+++.++++.|.++-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          220 SALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDH-RPSFRAIIRDLNSLF  274 (289)
T ss_dssp             TTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGG-SCCHHHHHHHHHTCC
T ss_pred             cccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHhc
Confidence                                   22567788888866665 578888888887663

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=3.8e-33  Score=244.55  Aligned_cols=222  Identities=14%  Similarity=0.191  Sum_probs=154.3

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  +..||+|++.........      ...+.+|+.+++.++||||+ +    .+...
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  110 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSS------NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRN  110 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CT------THHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchH------HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            35889999999999999999984  889999987544322111      35688999999999999999 2    22222


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeeccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~~  159 (260)
                      .+  .+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+|||++..
T Consensus       111 ~~--lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~  188 (494)
T 3lij_A          111 YY--LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV  188 (494)
T ss_dssp             EE--EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EE--EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence            22  24444433322      235788899999999999999999999999999999999976   45699999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc--
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR--  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--  233 (260)
                      ........           ...++..+.+|+.+ ..+++++|+||+|++++++++|..|+.   ..++...+..+...  
T Consensus       189 ~~~~~~~~-----------~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  257 (494)
T 3lij_A          189 FENQKKMK-----------ERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD  257 (494)
T ss_dssp             CBTTBCBC-----------CCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             CCCCcccc-----------ccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            65432111           11112222233332 457889999999999999999988876   45555555544322  


Q ss_pred             -----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                           ..++.+.+++.+|...++..|..
T Consensus       258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s  285 (494)
T 3lij_A          258 SPEWKNVSEGAKDLIKQMLQFDSQRRIS  285 (494)
T ss_dssp             SGGGTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             chhcccCCHHHHHHHHHHCCCChhhCcc
Confidence                 22455677777777777777753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.8e-33  Score=229.16  Aligned_cols=219  Identities=14%  Similarity=0.164  Sum_probs=157.8

Q ss_pred             cccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DD   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~   85 (260)
                      ..|++.+.||+|+||.||+|++.     +..+|+|.+...       ......+.+.+|+.++++++||||+ +    ..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   97 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-------TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR   97 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-------CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-------CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEc
Confidence            44788999999999999999973     235788875321       1112246789999999999999999 2    22


Q ss_pred             CCch-hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 VQKS-AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 ~~~~-~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      .... ++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        98 ~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a  175 (298)
T 3f66_A           98 SEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA  175 (298)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred             CCCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccc
Confidence            2211 22       4777776543  245788899999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc------------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA------------------  217 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~------------------  217 (260)
                      .............      .....+...+.+|+..  ..+++++|+||+|+++++++++..|                  
T Consensus       176 ~~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~  249 (298)
T 3f66_A          176 RDMYDKEYYSVHN------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGR  249 (298)
T ss_dssp             CCCSCGGGCBC-----------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTC
T ss_pred             ccccccchhcccc------ccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCC
Confidence            7664432111000      0011111123333333  4578899999999999999995432                  


Q ss_pred             ---------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 ---------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 ---------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                               ..+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       250 ~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~ell~~L~~~~  290 (298)
T 3f66_A          250 RLLQPEYCPDPLYEVMLKCWHPKAEM-RPSFSELVSRISAIF  290 (298)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                     22668888998876666 688899999988764

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=3.8e-33  Score=228.98  Aligned_cols=216  Identities=13%  Similarity=0.202  Sum_probs=156.8

Q ss_pred             cCcceeeccCCceeEEEEEEc--C---ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----Ee-CCC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL--G---RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LD-DVQ   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~--~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~-~~~   87 (260)
                      ++..+.||+|+||.||+|++.  +   ..+|+|.+....       .....+.+.+|+.++++++||||+    ++ +..
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   95 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-------EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE   95 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-------cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC
Confidence            556799999999999999972  2   369999753211       112246789999999999999999    22 222


Q ss_pred             ch-hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 KS-AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 ~~-~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .. ++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~  173 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARD  173 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred             CCcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence            22 12       6777777553  34578899999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccc------------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV------------------  218 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~------------------  218 (260)
                      ...........       .....+.+.| +|+..  ..+++++|+||+|+++++++++..|+                  
T Consensus       174 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~  246 (298)
T 3pls_A          174 ILDREYYSVQQ-------HRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR  246 (298)
T ss_dssp             TTTGGGGCSCC-------SSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC
T ss_pred             ccCCccccccc-------CcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC
Confidence            54332111000       0001112222 33322  35788999999999999999965442                  


Q ss_pred             ---------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 ---------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 ---------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                               .+.+++.+|+...+.. |+++.++++.+.++.
T Consensus       247 ~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          247 LPQPEYCPDSLYQVMQQCWEADPAV-RPTFRVLVGEVEQIV  286 (298)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence                     2668888888877666 678899998888764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.98  E-value=7.9e-33  Score=228.62  Aligned_cols=222  Identities=16%  Similarity=0.173  Sum_probs=159.6

Q ss_pred             cccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ....+.|++.+.||+|+||.||+|++       .++.||+|++....       .....+.+.+|+.++.++ +||||+ 
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i~~   91 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNHMNIVN   91 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-------hHHHHHHHHHHHHHHhhcccCCCeee
Confidence            44566789999999999999999986       25789999864321       111246789999999999 999999 


Q ss_pred             Ee----CCCchhh-------hhHHHhhccCcc---------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          83 LD----DVQKSAI-------QTLISNLDSQNI---------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        83 ~~----~~~~~~~-------~~l~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      ++    +....++       ++|.+++.....               ...+++..++.++.|++.||+|||++||+||||
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl  171 (313)
T 1t46_A           92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL  171 (313)
T ss_dssp             EEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence            22    2222222       577777754321               124889999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST  213 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~  213 (260)
                      ||+|||++.++.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++++++
T Consensus       172 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt  242 (313)
T 1t46_A          172 AARNILLTHGRITKICDFGLARDIKNDSNYVVK---------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS  242 (313)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCTTSCTTSEEC---------SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ccceEEEcCCCCEEEccccccccccccccceec---------cCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHh
Confidence            999999999999999999999766543221100         0111122 2333333  557889999999999999998


Q ss_pred             -cccccc---------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         214 -EDKAVD---------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       214 -~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                       |..|+.                           +.+++.+|+...+.. |+++.++++.|.++.
T Consensus       243 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~~~  306 (313)
T 1t46_A          243 LGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLK-RPTFKQIVQLIEKQI  306 (313)
T ss_dssp             TTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchh-CcCHHHHHHHHHHHH
Confidence             655432                           456667777755554 567777777776543

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.98  E-value=5.7e-33  Score=226.49  Aligned_cols=225  Identities=16%  Similarity=0.132  Sum_probs=156.8

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .+.|++.+.||+|+||.||+|.+.  |+.||+|++......      ....+.+.+|+.++++++||||+ +++.  ...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   78 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRLHDSIQEES   78 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC------HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence            456888999999999999999984  889999987654332      11245688999999999999999 2221  111


Q ss_pred             hhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc---EEEEeecccccc
Q psy7935          90 AIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH---LVMIDFGLSQIK  160 (260)
Q Consensus        90 ~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~---~kl~DFg~~~~~  160 (260)
                      ..+.+++++.+..+      ...+++..+..++.|++.||+|||++||+||||||+||+++.++.   +||+|||++...
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV  158 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence            12223444433222      235889999999999999999999999999999999999986554   999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc--
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR--  233 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--  233 (260)
                      .......           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+..+...  
T Consensus       159 ~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  227 (284)
T 3kk8_A          159 NDSEAWH-----------GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYP  227 (284)
T ss_dssp             CSSCBCC-----------CSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             ccCcccc-----------CCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCC
Confidence            4432211           01111122233333  447889999999999999999988864   34444444433221  


Q ss_pred             -----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                           ..++.+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps  255 (284)
T 3kk8_A          228 SPEWDTVTPEAKSLIDSMLTVNPKKRIT  255 (284)
T ss_dssp             TTTTTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             chhhcccCHHHHHHHHHHcccChhhCCC
Confidence                 22455677777777777777653

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.98  E-value=2.1e-33  Score=237.89  Aligned_cols=217  Identities=18%  Similarity=0.178  Sum_probs=148.4

Q ss_pred             ceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--CchhhhhHH
Q psy7935          21 AECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSAIQTLI   95 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~~~~l~   95 (260)
                      .+.||+|+||.||+|++  +|+.||+|++....     .   ...+.+.+|+.++++++||||+ +++.  ....++.++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~-----~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-----M---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCS-----H---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc-----c---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            56899999999999998  48899999865422     1   1246789999999999999999 2221  111222344


Q ss_pred             HhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE--ccCCcEEEEeecccccccccccc
Q psy7935          96 SNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL--SSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        96 ~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill--~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                      ||+.+..+       ...+++..+..++.|++.||+|||++||+||||||+|||+  +.++.+||+|||++.........
T Consensus       166 E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~  245 (373)
T 2x4f_A          166 EYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL  245 (373)
T ss_dssp             ECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred             eCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence            44443322       2357888899999999999999999999999999999999  45789999999999766443221


Q ss_pred             cccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-------cc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-------RQ  234 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~  234 (260)
                      ..           ..+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+.+..+....+       ..
T Consensus       246 ~~-----------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  314 (373)
T 2x4f_A          246 KV-----------NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD  314 (373)
T ss_dssp             CC-----------CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTT
T ss_pred             cc-----------ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhcc
Confidence            10           1111122233333  457889999999999999999988875   3444555444322       12


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .++.+.+++.+|...++..|..
T Consensus       315 ~~~~~~~li~~~L~~dp~~Rps  336 (373)
T 2x4f_A          315 ISEEAKEFISKLLIKEKSWRIS  336 (373)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCHHHHHHHHHHcCCChhhCCC
Confidence            2456677777777777777754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.98  E-value=7.2e-33  Score=233.92  Aligned_cols=186  Identities=21%  Similarity=0.267  Sum_probs=139.0

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQ--   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~--   87 (260)
                      +.|++++.||+|+||.||+|++.  +..||||++....       .......+.+|++++.+++||||+ +++   ..  
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-------HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-------CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence            56899999999999999999984  8899999864211       112246788999999999999999 222   11  


Q ss_pred             ----chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          88 ----KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ----~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                          ..++      ++|.+++...    .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~~~~~iv~e~~~~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA  175 (364)
T ss_dssp             TTCCCEEEEEECCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             cccceEEEEEcccCcCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcce
Confidence                1111      5566666443    4888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ............       .....++..+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       176 ~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~  233 (364)
T 3qyz_A          176 RVADPDHDHTGF-------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP  233 (364)
T ss_dssp             EECCGGGCBCCT-------TCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             EecCCCCCcccc-------ccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCC
Confidence            766543221110       0111222223344432   347889999999999999999988765

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.98  E-value=2.8e-33  Score=238.42  Aligned_cols=224  Identities=16%  Similarity=0.136  Sum_probs=154.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC--CCCeE-EeC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR--MADIC-LDD----V   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~-~~~----~   86 (260)
                      ...|++.+.||+|+||.||+|.+. ++.||||++......      ......+.+|+.++.+++  ||||+ +++    .
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~  128 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD------NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  128 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCC------HHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccccc------HHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC
Confidence            345889999999999999999984 888999987544321      123467899999999997  49998 322    1


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++      ++|.+++....   .+++..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||+++..
T Consensus       129 ~~~~lv~E~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          129 QYIYMVMECGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  204 (390)
T ss_dssp             SEEEEEEECCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC
T ss_pred             CEEEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccc
Confidence            22122      56777776543   578888899999999999999999999999999999996 589999999999766


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc-------------ccccccceeEeecceeeeecccccccc----HHHH
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------------QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDM  223 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~  223 (260)
                      ........        .....+...+.+|+..             ..+++++|+||+|++++++++|..|+.    ....
T Consensus       205 ~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~  276 (390)
T 2zmd_A          205 QPDTTSVV--------KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK  276 (390)
T ss_dssp             -----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH
T ss_pred             cCCCcccc--------CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH
Confidence            43321100        0011112222233332             258889999999999999999988875    1223


Q ss_pred             HHHHHhhc-----cccCCccHHHHHHHHHHhccccccc
Q psy7935         224 FNWILSSY-----RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       224 ~~~~~~~~-----~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +..++...     +...++.+.+++.+|...++..|..
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  314 (390)
T 2zmd_A          277 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS  314 (390)
T ss_dssp             HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC
Confidence            33333321     1222345677777777777777753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.98  E-value=6.8e-33  Score=225.33  Aligned_cols=220  Identities=15%  Similarity=0.114  Sum_probs=160.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  +..+|+|.+......        ..+.+.+|++++++++||||+ +    .+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   79 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--------DVDRFKQEIEIMKSLDHPNIIRLYETFEDNT   79 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            355888999999999999999984  678999986543221        145688999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE---ccCCcEEEEeeccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill---~~~~~~kl~DFg~~  157 (260)
                      ..++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~  156 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA  156 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             eEEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence            2222       3444444332   358899999999999999999999999999999999999   77899999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR  233 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  233 (260)
                      ...........           ..+...+.+|+.. ..+++++|+||+|++++++++|..|+.   ..+....+..+...
T Consensus       157 ~~~~~~~~~~~-----------~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  225 (277)
T 3f3z_A          157 ARFKPGKMMRT-----------KVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFT  225 (277)
T ss_dssp             EECCTTSCBCC-----------CCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             eeccCccchhc-----------cCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            76543321110           1111112223322 447889999999999999999988876   44555555544322


Q ss_pred             -------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 -------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 -------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ..++.+.+++.+|...++..|..
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s  255 (277)
T 3f3z_A          226 FPEKDWLNVSPQAESLIRRLLTKSPKQRIT  255 (277)
T ss_dssp             CCHHHHTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CCchhhhcCCHHHHHHHHHHccCChhhCcC
Confidence                   23566788888888888888864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=4.7e-33  Score=232.27  Aligned_cols=218  Identities=17%  Similarity=0.160  Sum_probs=150.8

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhc--ccCCCCeE-EeC----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLM--KCRMADIC-LDD----   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~--~~~h~~i~-~~~----   85 (260)
                      ...+.|++.+.||+|+||.||+|+++++.||||++....           .....+|.+++.  .++||||+ +++    
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~  102 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE-----------EASWFRETEIYQTVLMRHENILGFIAADIK  102 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc-----------cchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence            334568999999999999999999999999999863221           123344444444  45899999 322    


Q ss_pred             CC----chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCcEEEccC
Q psy7935          86 VQ----KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN--------NIIHGDLTTSNMILSSD  146 (260)
Q Consensus        86 ~~----~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~--------~i~H~dlkp~Nill~~~  146 (260)
                      ..    ..++       ++|.+++...    .+++..++.++.|++.||+|||++        ||+||||||+|||++.+
T Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~  178 (337)
T 3mdy_A          103 GTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN  178 (337)
T ss_dssp             SCGGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred             CCCCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence            21    1112       4666666443    488899999999999999999999        99999999999999999


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--cccc------ccceeEeecceeeeeccc----
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYN------HHLVMIDFGLSQIKVSTE----  214 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~di~s~g~~~~~~~~~----  214 (260)
                      +.+||+|||++............  ...    ...++..+.+|+..  ....      .++|+||+|++++++++|    
T Consensus       179 ~~~kl~Dfg~a~~~~~~~~~~~~--~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~  252 (337)
T 3mdy_A          179 GTCCIADLGLAVKFISDTNEVDI--PPN----TRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG  252 (337)
T ss_dssp             SCEEECCCTTCEECC-----------CC----SSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             CCEEEEeCCCceeeccccccccC--CCC----CCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence            99999999999765433211100  000    01111122233322  1122      248999999999999998    


Q ss_pred             ------cccc-------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         215 ------DKAV-------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       215 ------~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                            ..|+                                     .+.+++.+|+...+.. |+++.++++.|..+..
T Consensus       253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~-Rps~~ell~~L~~l~~  331 (337)
T 3mdy_A          253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPAS-RLTALRVKKTLAKMSE  331 (337)
T ss_dssp             TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             cccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhh-CCCHHHHHHHHHHHHh
Confidence                  2221                                     1557888999877766 6799999999988764


Q ss_pred             c
Q psy7935         252 R  252 (260)
Q Consensus       252 ~  252 (260)
                      .
T Consensus       332 ~  332 (337)
T 3mdy_A          332 S  332 (337)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.98  E-value=4.3e-33  Score=231.34  Aligned_cols=226  Identities=15%  Similarity=0.161  Sum_probs=161.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||+|++.........  .....+.+.+|+.++++++||||+ +    .+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVSREEIEREVSILRQVLHHNVITLHDVYENRT   88 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc--cchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence            456889999999999999999984  889999987654432211  111246789999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----cEEEEeecc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----HLVMIDFGL  156 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----~~kl~DFg~  156 (260)
                      ..++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++    .+||+|||+
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           89 DVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             EEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            2222       4666666543   3588999999999999999999999999999999999999877    899999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      +..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....
T Consensus       166 ~~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  234 (321)
T 2a2a_A          166 AHEIEDGVEFK-----------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVS  234 (321)
T ss_dssp             CEECCTTCCCC-----------CCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTC
T ss_pred             ceecCcccccc-----------ccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence            97654432111           11111222333333  457889999999999999999988875   344444444322


Q ss_pred             c-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         232 R-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .       ...++.+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  266 (321)
T 2a2a_A          235 YDFDEEFFSHTSELAKDFIRKLLVKETRKRLT  266 (321)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC
T ss_pred             cccChhhhcccCHHHHHHHHHHcCCChhhCcC
Confidence            1       122445677777777777777753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.98  E-value=2.5e-33  Score=253.54  Aligned_cols=228  Identities=16%  Similarity=0.162  Sum_probs=167.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC--Cc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV--QK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~--~~   88 (260)
                      .+.|++++.||+|+||.||+|++.  ++.||||++.....     ......+.+..|..++..+ .||+|+ +++.  ..
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~  414 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM  414 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-----HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC
Confidence            345888999999999999999984  78899998653211     1111235678899999887 688888 2221  11


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..++.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++++||+|||+++....
T Consensus       415 ~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~  494 (674)
T 3pfq_A          415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  494 (674)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred             CEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence            222334444443332      23588999999999999999999999999999999999999999999999999975332


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---ccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RRQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~  234 (260)
                      .....          .+..++..+.+|+.+  ..++.++|+||+|++++++++|..|+.   ..++++.++...   +..
T Consensus       495 ~~~~~----------~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~  564 (674)
T 3pfq_A          495 DGVTT----------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS  564 (674)
T ss_dssp             TTCCB----------CCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTT
T ss_pred             CCccc----------ccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence            21111          112223333344433  568899999999999999999999986   667777777653   334


Q ss_pred             CCccHHHHHHHHHHhcccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      .++.+.+++++|...++..|...
T Consensus       565 ~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          565 MSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             SCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             CCHHHHHHHHHHccCCHHHCCCC
Confidence            46778999999999999999754

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.98  E-value=7.5e-33  Score=230.35  Aligned_cols=212  Identities=14%  Similarity=0.221  Sum_probs=150.8

Q ss_pred             ceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-----EeCCCchhh-
Q psy7935          21 AECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-----LDDVQKSAI-   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~~~~~~~~-   91 (260)
                      .+.||+|+||.||+|++.  ++.||||++...           ....+.+|+.++..+. ||||+     +.+....++ 
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence            378999999999999984  889999986422           1356778999999997 99999     222222222 


Q ss_pred             ------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---cEEEEeecccccccc
Q psy7935          92 ------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---HLVMIDFGLSQIKVS  162 (260)
Q Consensus        92 ------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---~~kl~DFg~~~~~~~  162 (260)
                            ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++   .+||+|||++.....
T Consensus        85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~  161 (325)
T 3kn6_A           85 MELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP  161 (325)
T ss_dssp             ECCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred             EEccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence                  4555555443   3689999999999999999999999999999999999998755   899999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH----------HHHHHHHHhh
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF----------RDMFNWILSS  230 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~----------~~~~~~~~~~  230 (260)
                      .....          .+..+...+.+|+..  ..+++++|+||+|++++++++|..|+..          .++.+.+..+
T Consensus       162 ~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~  231 (325)
T 3kn6_A          162 DNQPL----------KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG  231 (325)
T ss_dssp             --------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT
T ss_pred             CCCcc----------cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC
Confidence            32111          111122223333333  4578899999999999999999988762          3556666554


Q ss_pred             ccc-------cCCccHHHHHHHHHHhccccccc
Q psy7935         231 YRR-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...       ..++.+.+++.+|...++..|..
T Consensus       232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt  264 (325)
T 3kn6_A          232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK  264 (325)
T ss_dssp             CCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC
T ss_pred             CCCCCcccccCCCHHHHHHHHHHCCCChhHCCC
Confidence            432       23567889999999999998875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.98  E-value=1.3e-33  Score=240.05  Aligned_cols=183  Identities=14%  Similarity=0.212  Sum_probs=132.7

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++....            ....+|+++++.++||||+ +++.    
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~------------~~~~~E~~il~~l~hpnIv~l~~~~~~~   72 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP------------RYKNRELDIMKVLDHVNIIKLVDYFYTT   72 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHTTCCCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHHcCCCCccchhheeeec
Confidence            345688999999999999999998  48999999864321            1123689999999999999 2221    


Q ss_pred             C------------------------------------chhhhhHHHhhccC---------cccccchHHHHHHHHHHHHH
Q psy7935          87 Q------------------------------------KSAIQTLISNLDSQ---------NITRENISDIIKLLSIEIGT  121 (260)
Q Consensus        87 ~------------------------------------~~~~~~l~~~l~~~---------~~~~~~~~~~~~~i~~~i~~  121 (260)
                      .                                    ...++.+++|+.+.         .....+++..++.++.|++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~  152 (383)
T 3eb0_A           73 GDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFR  152 (383)
T ss_dssp             -------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             CcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence            1                                    11122233333321         00346889999999999999


Q ss_pred             HHHHhhhCCceecCCCCCcEEEc-cCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccc
Q psy7935         122 TLSVMHSNNIIHGDLTTSNMILS-SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNH  197 (260)
Q Consensus       122 ~l~~LH~~~i~H~dlkp~Nill~-~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  197 (260)
                      ||+|||++||+||||||+|||++ .++.+||+|||+++.........           ...+...+.+|+..   ..++.
T Consensus       153 aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~  221 (383)
T 3eb0_A          153 AVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV-----------AYICSRFYRAPELMLGATEYTP  221 (383)
T ss_dssp             HHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC-----------CCCCCSSCCCHHHHTTCSSCCT
T ss_pred             HHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc-----------CcccCCCccCHHHhcCCCCCCc
Confidence            99999999999999999999998 58999999999997654332211           11112223344433   34788


Q ss_pred             cceeEeecceeeeecccccccc
Q psy7935         198 HLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       198 ~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++|+||+|++++++++|..|+.
T Consensus       222 ~~DiwslG~il~ell~g~~pf~  243 (383)
T 3eb0_A          222 SIDLWSIGCVFGELILGKPLFS  243 (383)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSC
T ss_pred             chhhhhHHHHHHHHHhCCCCCC
Confidence            9999999999999999988876

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.98  E-value=8.1e-33  Score=228.49  Aligned_cols=221  Identities=14%  Similarity=0.188  Sum_probs=148.5

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~   86 (260)
                      ..+.|++.+.||+|+||.||+|.+  +|+.||+|++.......     ......+.+|+.++++++||||+ ++    +.
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  104 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD-----AKARADCIKEIDLLKQLNHPNVIKYYASFIED  104 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            345689999999999999999998  48999999865433221     22356789999999999999999 22    22


Q ss_pred             Cchhh-------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAI-------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...++       ++|.+++.... ....+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR  184 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence            22222       35555554311 02357889999999999999999999999999999999999999999999999987


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-----------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-----------------  219 (260)
                      ..........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.                 
T Consensus       185 ~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  254 (310)
T 2wqm_A          185 FFSSKTTAAH----------SLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD  254 (310)
T ss_dssp             ------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC
T ss_pred             eecCCCcccc----------ccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc
Confidence            6543221110          11111122233322  457889999999999999999876642                 


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                  +.+++.+|+...+.. |+++.++++.+.++.
T Consensus       255 ~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          255 YPPLPSDHYSEELRQLVNMCINPDPEK-RPDVTYVYDVAKRMH  296 (310)
T ss_dssp             SCCCCTTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCcccccCHHHHHHHHHHcCCChhh-CCCHHHHHHHHHHHH
Confidence                        445666666655554 566677776666554

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.98  E-value=3.4e-33  Score=232.81  Aligned_cols=225  Identities=15%  Similarity=0.138  Sum_probs=153.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----C
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----D   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~   85 (260)
                      ...+.|++.+.||+|+||.||+|++  +++.||||++......      ......+.+|+.++++++||||+ ++    +
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE------EGVPGTAIREVSLLKELQHRNIIELKSVIHH  104 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------CHHHHHHGGGCCCTTBCCEEEEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc------cccchhHHHHHHHHHHcCCCCcceEEEEEec
Confidence            3445699999999999999999998  4899999986433211      11235678999999999999999 22    2


Q ss_pred             CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc-----cCCcEEEEee
Q psy7935          86 VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS-----SDHHLVMIDF  154 (260)
Q Consensus        86 ~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~-----~~~~~kl~DF  154 (260)
                      ....++      ++|.+++....   .+++..+..++.|++.||+|||++||+||||||+|||++     .++.+||+||
T Consensus       105 ~~~~~lv~e~~~~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df  181 (329)
T 3gbz_A          105 NHRLHLIFEYAENDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDF  181 (329)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred             CCEEEEEEecCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcC
Confidence            222222      56666665432   588999999999999999999999999999999999994     4566999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHH
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWIL  228 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~  228 (260)
                      |++...........          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+....+.
T Consensus       182 g~a~~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  251 (329)
T 3gbz_A          182 GLARAFGIPIRQFT----------HEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF  251 (329)
T ss_dssp             THHHHHC---------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCccccCCcccccC----------CCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHH
Confidence            99976543321110          11112223334433   347899999999999999999988875   223333332


Q ss_pred             hhcc---------------------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         229 SSYR---------------------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~~~---------------------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....                                 ...++.+.+++.+|...++..|..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  312 (329)
T 3gbz_A          252 EVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS  312 (329)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC
Confidence            2110                                 012355678888888888888864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.98  E-value=1.6e-33  Score=234.24  Aligned_cols=185  Identities=18%  Similarity=0.223  Sum_probs=132.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  ++.||+|++.......       ....+.+|+.++++++||||+ ++    +...
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc-------cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE
Confidence            35788999999999999999984  8899999864322110       012345789999999999999 22    2222


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        75 ~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  152 (324)
T 3mtl_A           75 LTLVFEYLDKDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI  152 (324)
T ss_dssp             EEEEEECCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred             EEEEecccccCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence            222      4555555433  34588899999999999999999999999999999999999999999999999875543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .....          ....++..+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       153 ~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  202 (324)
T 3mtl_A          153 PTKTY----------DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP  202 (324)
T ss_dssp             --------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             Ccccc----------ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            22111          011112223334333   347889999999999999999988875

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.98  E-value=2.6e-33  Score=237.19  Aligned_cols=188  Identities=20%  Similarity=0.218  Sum_probs=132.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~   88 (260)
                      .+.|++.+.||+|+||.||+|++  +++.||||++.....      .......+.+|+.+++.++||||+ +++   ...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   97 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   97 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS------SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC------ChHHHHHHHHHHHHHHhcCCCCccceEEeecccc
Confidence            35689999999999999999998  488999998653221      112346788999999999999999 222   211


Q ss_pred             -----hhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 -----SAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 -----~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                           ...+.+++|+.+...   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus        98 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A           98 SLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             STTTCCEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             ccccccceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence                 122334444433211   124788889999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......           ....+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       178 ~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  227 (371)
T 2xrw_A          178 GTSFMM-----------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP  227 (371)
T ss_dssp             -----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccc-----------CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence            432111           011112222333333  457889999999999999999988875

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.98  E-value=2.8e-33  Score=227.93  Aligned_cols=221  Identities=15%  Similarity=0.185  Sum_probs=154.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  +..||+|++....     .........+.+|+.++++++||||+ +    .+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT   82 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-----cchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC
Confidence            456888999999999999999984  7789999864322     12222346788999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++...
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            2222       3455554432   35788999999999999999999999999999999999999999999999988554


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      ......            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....   +
T Consensus       160 ~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  227 (279)
T 3fdn_A          160 PSSRRT------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP  227 (279)
T ss_dssp             --------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC
T ss_pred             Cccccc------------ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC
Confidence            332211            01111122233322  456789999999999999999988766   333333333322   2


Q ss_pred             ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ...++.+.+++.+|...++..|.
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rp  250 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRP  250 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSC
T ss_pred             CcCCHHHHHHHHHHhccChhhCC
Confidence            22345567777777777776664

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.98  E-value=9.8e-33  Score=228.62  Aligned_cols=232  Identities=13%  Similarity=0.125  Sum_probs=161.1

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-   86 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-   86 (260)
                      .....+.|++.+.||+|+||.||+|++  +|+.||||++....        ....+.+.+|+.+++.++||||+ +++. 
T Consensus        24 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   95 (317)
T 2buj_A           24 VIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--------QQDREEAQREADMHRLFNHPNILRLVAYC   95 (317)
T ss_dssp             EEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--------HHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             EEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--------HHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            344567799999999999999999998  48999999864321        12356788999999999999999 2221 


Q ss_pred             -----Cchhh---------hhHHHhhccCc-ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEE
Q psy7935          87 -----QKSAI---------QTLISNLDSQN-ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVM  151 (260)
Q Consensus        87 -----~~~~~---------~~l~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl  151 (260)
                           .....         ++|.+++.... ....+++..++.++.|++.||+|||++||+||||||+|||++.++.+||
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl  175 (317)
T 2buj_A           96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVL  175 (317)
T ss_dssp             EEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEE
T ss_pred             EeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEE
Confidence                 11111         46666664321 0345889999999999999999999999999999999999999999999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc-------
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------  219 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~-------  219 (260)
                      +|||++................. ......+...+.+|+..     ..+++++|+||+|++++++++|..|+.       
T Consensus       176 ~dfg~~~~~~~~~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  254 (317)
T 2buj_A          176 MDLGSMNQACIHVEGSRQALTLQ-DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD  254 (317)
T ss_dssp             CCCSSCEESCEEEESHHHHHHHH-HHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS
T ss_pred             EecCcchhccccccccccccccc-ccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc
Confidence            99999875532211100000000 00000011112233322     236889999999999999999887642       


Q ss_pred             ---------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         220 ---------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       220 ---------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                                           +.+++.+|+...+.. |+++.++++.|..+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          255 SVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQ-RPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             CHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHTCCC
T ss_pred             hhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhh-CCCHHHHHHHhhhcCCC
Confidence                                 457788888866665 67888888888877543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.98  E-value=9.5e-33  Score=232.71  Aligned_cols=188  Identities=19%  Similarity=0.180  Sum_probs=139.4

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-----CCCe
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-----MADI   81 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-----h~~i   81 (260)
                      +......+.|++.+.||+|+||.||+|++  +++.||||++...         ......+..|+.+++.+.     ||||
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---------KKYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---------HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---------hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            33444567799999999999999999999  5889999985321         112345677888888886     9999


Q ss_pred             E-EeC----CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-----
Q psy7935          82 C-LDD----VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----  145 (260)
Q Consensus        82 ~-~~~----~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-----  145 (260)
                      + +++    ....++      ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.     
T Consensus        99 v~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  177 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK  177 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCE
T ss_pred             ecccceeeECCeeEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccc
Confidence            9 322    222222      56666665443 334888999999999999999999999999999999999975     


Q ss_pred             --------------------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEe
Q psy7935         146 --------------------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMID  203 (260)
Q Consensus       146 --------------------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s  203 (260)
                                          ++.+||+|||++........             ...+...+.+|+..  ..++.++|+||
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~Diws  244 (360)
T 3llt_A          178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG-------------SIINTRQYRAPEVILNLGWDVSSDMWS  244 (360)
T ss_dssp             EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC-------------SCCSCGGGCCHHHHTTCCCCTTHHHHH
T ss_pred             cccchhcccccccccccccCCCCEEEEeccCceecCCCCc-------------CccCcccccCcHHHcCCCCCCccchHH
Confidence                                78999999999975433211             11111222333333  45789999999


Q ss_pred             ecceeeeecccccccc
Q psy7935         204 FGLSQIKVSTEDKAVD  219 (260)
Q Consensus       204 ~g~~~~~~~~~~~~~~  219 (260)
                      +|++++++++|..|+.
T Consensus       245 lG~il~ell~g~~pf~  260 (360)
T 3llt_A          245 FGCVLAELYTGSLLFR  260 (360)
T ss_dssp             HHHHHHHHHHSSCSCC
T ss_pred             HHHHHHHHHHCCCCCC
Confidence            9999999999998875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.98  E-value=3.2e-33  Score=227.82  Aligned_cols=216  Identities=18%  Similarity=0.238  Sum_probs=159.3

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ-   87 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~-   87 (260)
                      ....+.|++.+.||+|+||.||+|++.  ++.||+|.+....            ..+.+|++++++++||||+ +.+.. 
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~~e~~~l~~l~h~~i~~~~~~~~   74 (284)
T 2a19_B            7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------EKAEREVKALAKLDHVNIVHYNGCWD   74 (284)
T ss_dssp             HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------------GGGHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------------HHHHHHHHHHHhCCCCCEEEEeeeEe
Confidence            334556889999999999999999994  8999999864321            2366899999999999999 33211 


Q ss_pred             -----------------chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcE
Q psy7935          88 -----------------KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNM  141 (260)
Q Consensus        88 -----------------~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Ni  141 (260)
                                       ...+         ++|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Ni  153 (284)
T 2a19_B           75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNI  153 (284)
T ss_dssp             EEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             ccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHE
Confidence                             1111         46666665432 34588899999999999999999999999999999999


Q ss_pred             EEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeeccccccc
Q psy7935         142 ILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       142 ll~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      |++.++.+||+|||++...........           . .+.+.| +|+..  ..++.++|+||+|+++++++++..|+
T Consensus       154 l~~~~~~~kl~Dfg~~~~~~~~~~~~~-----------~-~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~  221 (284)
T 2a19_B          154 FLVDTKQVKIGDFGLVTSLKNDGKRTR-----------S-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA  221 (284)
T ss_dssp             EEEETTEEEECCCTTCEESSCCSCCCC-----------C-CSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred             EEcCCCCEEECcchhheeccccccccc-----------c-CCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence            999999999999999876544321110           0 112222 33322  45788999999999999999886543


Q ss_pred             c---------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcccc
Q psy7935         219 D---------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       219 ~---------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~  253 (260)
                      .                     ..+++.+|+...+.. |+++.++++.+..+....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~-Rps~~e~l~~l~~~~~~~  276 (284)
T 2a19_B          222 FETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPED-RPNTSEILRTLTVWKKSP  276 (284)
T ss_dssp             HHHHHHHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHTC--
T ss_pred             hhHHHHHHHhhcccccccCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHhhCC
Confidence            2                     456778888766665 578888888887765443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.98  E-value=1.3e-33  Score=242.63  Aligned_cols=217  Identities=16%  Similarity=0.214  Sum_probs=152.6

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-------
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-------   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-------   86 (260)
                      .|+..+.||+|+||.||+|++  +|+.||||++....            ....+|+++++.++||||+ +.+.       
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~  122 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK  122 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETT
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------------hhHHHHHHHHHHcCCCCccceeeEEeccCCC
Confidence            488899999999999999999  48999999864321            1134689999999999999 2211       


Q ss_pred             -CchhhhhHHHhhccC---------cccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeec
Q psy7935          87 -QKSAIQTLISNLDSQ---------NITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFG  155 (260)
Q Consensus        87 -~~~~~~~l~~~l~~~---------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg  155 (260)
                       ...+++.+++|+.+.         .....+++..++.++.|++.||+|||++||+||||||+|||++. ++.+||+|||
T Consensus       123 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG  202 (420)
T 1j1b_A          123 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG  202 (420)
T ss_dssp             TTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred             CcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccch
Confidence             111222234443321         00345888899999999999999999999999999999999996 4678999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILS  229 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~  229 (260)
                      +++.........           ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..++.
T Consensus       203 ~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~  271 (420)
T 1j1b_A          203 SAKQLVRGEPNV-----------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK  271 (420)
T ss_dssp             TCEECCTTCCCC-----------SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             hhhhcccCCCce-----------eeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            997654332111           11122223344433   357889999999999999999998875   2222222222


Q ss_pred             h--------------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         230 S--------------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~--------------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .                                .+...++.+.+++.+|...++..|..
T Consensus       272 ~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t  330 (420)
T 1j1b_A          272 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT  330 (420)
T ss_dssp             HHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC
Confidence            1                                01122466789999999888888864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.98  E-value=1e-32  Score=225.80  Aligned_cols=221  Identities=17%  Similarity=0.226  Sum_probs=160.3

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-----   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-----   86 (260)
                      ..+|.+.+.||+|+||.||+|.+.  +..||+|.+......      ....+.+.+|+.++++++||||+ +++.     
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT------KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC------HHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc
Confidence            445788899999999999999984  788999986543322      12356789999999999999999 3321     


Q ss_pred             -Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEc-cCCcEEEEe
Q psy7935          87 -QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILS-SDHHLVMID  153 (260)
Q Consensus        87 -~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~-~~~~~kl~D  153 (260)
                       ....+         ++|.+++...   ..+++..++.++.|++.||.|||+++  |+||||||+|||++ .++.+||+|
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~D  175 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD  175 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEee
Confidence             12222         4555555432   35888999999999999999999999  99999999999998 689999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc----HHHHHHHHH
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWIL  228 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~  228 (260)
                      ||++.........            ...+...+.+|+.. ..++.++|+||+|++++++++|..|+.    .......+.
T Consensus       176 fg~~~~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  243 (290)
T 1t4h_A          176 LGLATLKRASFAK------------AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT  243 (290)
T ss_dssp             TTGGGGCCTTSBE------------ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT
T ss_pred             CCCcccccccccc------------cccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh
Confidence            9998654332111            01111222333333 457889999999999999999988875    344555544


Q ss_pred             hhcc-----ccCCccHHHHHHHHHHhccccccc
Q psy7935         229 SSYR-----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~~~-----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..     ...++.+.+++.+|...++..|..
T Consensus       244 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  276 (290)
T 1t4h_A          244 SGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS  276 (290)
T ss_dssp             TTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             ccCCccccCCCCCHHHHHHHHHHccCChhhCCC
Confidence            4322     222356788888888888888864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.98  E-value=1.8e-32  Score=224.77  Aligned_cols=227  Identities=11%  Similarity=0.131  Sum_probs=162.8

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      .....+.|++.+.||+|+||.||+|++.  ++.+|+|++.......     ....+.+.+|+.++++++||||+ +++  
T Consensus        10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   84 (294)
T 2rku_A           10 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-----PHQREKMSMEISIHRSLAHQHVVGFHGFF   84 (294)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             CCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC-----HHHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence            4455667899999999999999999984  8899999865443222     22356788999999999999999 322  


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        ....++       ++|.+++..   ...+++..+..++.|++.||+|||++|++||||||+|||++.++.+||+|||+
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  161 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL  161 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccC
Confidence              222222       344444433   23578899999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      +...........           ...+.+.| +|+..  ..++.++|+||+|++++++++|..|+.   ..+....+...
T Consensus       162 ~~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  230 (294)
T 2rku_A          162 ATKVEYDGERKK-----------VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN  230 (294)
T ss_dssp             CEECCSTTCCBC-----------CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred             ceecccCccccc-----------cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc
Confidence            976543221110           01122222 33322  447789999999999999999988876   33444444332


Q ss_pred             c---cccCCccHHHHHHHHHHhccccccc
Q psy7935         231 Y---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .   +...++.+.+++.+|...++..|..
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps  259 (294)
T 2rku_A          231 EYSIPKHINPVAASLIQKMLQTDPTARPT  259 (294)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCccccCHHHHHHHHHHcccChhhCcC
Confidence            2   2333466788888888888777754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.98  E-value=1.1e-33  Score=234.99  Aligned_cols=228  Identities=20%  Similarity=0.163  Sum_probs=151.8

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~   88 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||||++..................+.+|++++++++||||+    ++....
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            456888999999999999999984  78999998754433211111112234688999999999999999    332233


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC---cEEEEeecccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH---HLVMIDFGLSQ  158 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~---~~kl~DFg~~~  158 (260)
                      .++       ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++.++   .+||+|||++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            222       3555555432   3588999999999999999999999999999999999998755   49999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeeccccccccH----HHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~  229 (260)
                      .........           ...+...+.+|+..     ..++.++|+||+|++++++++|..|+..    ..+.+.+..
T Consensus       166 ~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  234 (322)
T 2ycf_A          166 ILGETSLMR-----------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS  234 (322)
T ss_dssp             ECCCCHHHH-----------HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHH
T ss_pred             ecccccccc-----------cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHh
Confidence            654321110           01111122233322     4578899999999999999999887641    122222222


Q ss_pred             hc-------cccCCccHHHHHHHHHHhccccccc
Q psy7935         230 SY-------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       230 ~~-------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +.       +...++.+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps  268 (322)
T 2ycf_A          235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT  268 (322)
T ss_dssp             TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CccccCchhhhhcCHHHHHHHHHHcccCHhhCCC
Confidence            21       1223455667777777777776654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.98  E-value=1e-32  Score=228.91  Aligned_cols=221  Identities=15%  Similarity=0.175  Sum_probs=157.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L   83 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~   83 (260)
                      +...+.|++.+.||+|+||.||+|++.       ++.||+|.+....       .......+.+|+.++++++||||+ +
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-------CHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            445567899999999999999999864       5789999853221       111245688999999999999999 2


Q ss_pred             eC----CCchhh-------hhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          84 DD----VQKSAI-------QTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        84 ~~----~~~~~~-------~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      ++    ....++       ++|.+++.....       ...+++..++.++.|++.||+|||++||+||||||+|||++.
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~  173 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE  173 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC
Confidence            22    222222       466666543210       134588899999999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--  219 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--  219 (260)
                      ++.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++++++ +..|+.  
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  244 (322)
T 1p4o_A          174 DFTVKIGDFGMTRDIYETDYYRKG---------GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL  244 (322)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGG---------GSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             CCeEEECcCccccccccccccccc---------cCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence            999999999999765433211100         0111122 3334433  457889999999999999998 554432  


Q ss_pred             ------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                              ..+++.+|+...+.. |+++.++++.|.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          245 SNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM-RPSFLEIISSIKEE  297 (322)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHGGG
T ss_pred             CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCccc-CcCHHHHHHHHHHh
Confidence                                    456777777755555 57778888877654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=4.2e-33  Score=235.91  Aligned_cols=216  Identities=14%  Similarity=0.162  Sum_probs=149.1

Q ss_pred             cCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          18 LQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      |++.+.||+|+||.||+|++.     +..||+|.+..  ...     ....+.+.+|+.++++++||||+ +++    ..
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~--~~~-----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~  163 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITD-----IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCS--CSC-----SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCC--CCC-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC
Confidence            566789999999999999973     23688887532  111     11246799999999999999999 222    22


Q ss_pred             -chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 -KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 -~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                       ..++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~  241 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD  241 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             CCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccc
Confidence             1122       5677776543  23578888999999999999999999999999999999999999999999999976


Q ss_pred             ccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccc-------------------
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA-------------------  217 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~-------------------  217 (260)
                      ..........       ......+.+ +.+|+..  ..+++++|+||+|+++++++++..|                   
T Consensus       242 ~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~  314 (373)
T 3c1x_A          242 MYDKEFDSVH-------NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR  314 (373)
T ss_dssp             -----------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCC
T ss_pred             cccccccccc-------ccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCC
Confidence            5432211100       000011122 2333333  5578899999999999999994332                   


Q ss_pred             --------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 --------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 --------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                              ..+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       315 ~~~p~~~~~~l~~li~~cl~~dp~~-RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          315 LLQPEYCPDPLYEVMLKCWHPKAEM-RPSFSELVSRISAIF  354 (373)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                    22568888999877776 689999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.98  E-value=3.8e-33  Score=243.06  Aligned_cols=221  Identities=14%  Similarity=0.154  Sum_probs=154.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ   87 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~   87 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.||||++.....          ...+.+|+++++.++|++.+    ++...
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~E~~il~~L~~~~~i~~i~~~~~~   74 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLLYESKIYRILQGGTGIPNVRWFGVE   74 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----------SCCHHHHHHHHHHTTTSTTCCCEEEEEEE
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----------cHHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            3456888999999999999999984  89999998554322          12367889999999875544    22211


Q ss_pred             ch--hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE---ccCCcEEEEeecc
Q psy7935          88 KS--AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGL  156 (260)
Q Consensus        88 ~~--~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill---~~~~~~kl~DFg~  156 (260)
                      ..  ++      ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        75 ~~~~~lvme~~g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGl  152 (483)
T 3sv0_A           75 GDYNVLVMDLLGPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL  152 (483)
T ss_dssp             TTEEEEEEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTT
T ss_pred             CCEEEEEEECCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCc
Confidence            11  11      4555555432  2358999999999999999999999999999999999999   5789999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---------------  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---------------  219 (260)
                      ++............+....   ...+...+.+|+..  ..++.++|+||||++++++++|..|+.               
T Consensus       153 a~~~~~~~~~~~~~~~~~~---~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~  229 (483)
T 3sv0_A          153 AKKYRDTSTHQHIPYRENK---NLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKIS  229 (483)
T ss_dssp             CEECBCTTTCCBCCCCCCC---CCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHH
T ss_pred             ceeccCCcccccccccccc---ccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHh
Confidence            9876544322111111000   11122223333333  457889999999999999999987752               


Q ss_pred             ------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                        +.+++..|+...+.. |+++.++.+.|.++-
T Consensus       230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~-RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDD-KPDYSYLKRLFRDLF  277 (483)
T ss_dssp             HHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTC-CCCHHHHHHHHHHHH
T ss_pred             hccccccHHHHhcCCcHHHHHHHHHHhcCChhh-CcCHHHHHHHHHHHH
Confidence                              445666777644444 667777777766553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.98  E-value=6.1e-33  Score=231.45  Aligned_cols=227  Identities=18%  Similarity=0.209  Sum_probs=161.6

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--C-----ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--G-----RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      +...+.|++.+.||+|+||.||+|.+.  +     ..||+|.+....       .....+.+.+|+.+++++ +||||+ 
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~  114 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQHENIVN  114 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-------ChHHHHHHHHHHHHHHhhcCCCCeee
Confidence            344566888999999999999999984  2     369999854321       111246789999999999 899999 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCcc-----------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCc
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQNI-----------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN  140 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~N  140 (260)
                      +++    ....++       ++|.+++.....           ...+++..++.++.|++.||+|||++||+||||||+|
T Consensus       115 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  194 (333)
T 2i1m_A          115 LLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN  194 (333)
T ss_dssp             EEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccce
Confidence            222    222222       466666643210           2246888999999999999999999999999999999


Q ss_pred             EEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccc
Q psy7935         141 MILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKA  217 (260)
Q Consensus       141 ill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~  217 (260)
                      ||++.++.+||+|||++............        ....+...+.+|+..  ..++.++|+||+|++++++++ |..|
T Consensus       195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  266 (333)
T 2i1m_A          195 VLLTNGHVAKIGDFGLARDIMNDSNYIVK--------GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP  266 (333)
T ss_dssp             CEEEGGGEEEBCCCGGGCCGGGCTTSEEC--------SSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             EEECCCCeEEECccccccccccccceeec--------CCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCC
Confidence            99999999999999999765433211100        011111123334433  457889999999999999998 6544


Q ss_pred             c---------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhccccc
Q psy7935         218 V---------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       218 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r  254 (260)
                      +                           .+.+++.+|+...+.. |+++.++++.|.++....|
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          267 YPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTH-RPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             STTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHHHH
T ss_pred             CcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhh-CcCHHHHHHHHHHHHHhhh
Confidence            2                           2457888888866665 6788888888887654433

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.98  E-value=9.6e-33  Score=233.31  Aligned_cols=218  Identities=19%  Similarity=0.221  Sum_probs=142.8

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQ--   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~--   87 (260)
                      +.|++++.||+|+||.||+|.+  +|+.||||++....      ......+.+.+|+.+++.++||||+ +++   ..  
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  102 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS  102 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCc
Confidence            5689999999999999999998  48999999853321      1122356788999999999999999 222   11  


Q ss_pred             -----chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 -----KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 -----~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                           ..++      ++|.+++..    ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus       103 ~~~~~~~~lv~e~~~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~  178 (367)
T 2fst_X          103 LEEFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL  178 (367)
T ss_dssp             GGGCCCCEEEEECCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---
T ss_pred             cccCCeEEEEecccCCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccc
Confidence                 1111      333333332    3488999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      ++.......             ...++..+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..+...
T Consensus       179 a~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~  245 (367)
T 2fst_X          179 ARHTADEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRL  245 (367)
T ss_dssp             -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cccccccCC-------------CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            976433210             11122222333332   357889999999999999999988875   22222222211


Q ss_pred             -----------------------c-----------cccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -----------------------Y-----------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -----------------------~-----------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                             .           ....++.+.+++++|...++..|..
T Consensus       246 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t  305 (367)
T 2fst_X          246 VGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT  305 (367)
T ss_dssp             HCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             hCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcC
Confidence                                   0           0112455788889998888888865

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.98  E-value=2.1e-32  Score=226.05  Aligned_cols=185  Identities=17%  Similarity=0.242  Sum_probs=135.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||+|++....      ......+.+.+|+.++++++||||+ +++    ...
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   76 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE------DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR   76 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC------C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc------cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCe
Confidence            45788999999999999999984  8999999864332      1122356788999999999999999 222    222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       +++.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EEEEEEeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            222       3344444332   358899999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......          ...+...+.+|+..   ..+++++|+||+|++++++++|..|+.
T Consensus       154 ~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  204 (311)
T 4agu_A          154 GPSDYYD----------DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWP  204 (311)
T ss_dssp             ----------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CcccccC----------CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence            3321110          11112222333333   356889999999999999999987764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.98  E-value=2.2e-32  Score=228.49  Aligned_cols=230  Identities=11%  Similarity=0.126  Sum_probs=162.3

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ....+.|.+.+.||+|+||.||++++.  ++.+|+|++.......     ....+.+.+|+.+++.++|+||+ +++.  
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  111 (335)
T 2owb_A           37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-----PHQREKMSMEISIHRSLAHQHVVGFHGFFE  111 (335)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC-----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            344567899999999999999999984  7899999865443222     22356788999999999999999 3221  


Q ss_pred             CchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          87 QKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .....+.+++|+.+..+      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus       112 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          112 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  191 (335)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceec
Confidence            11122223444433222      235888999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      ........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....   +
T Consensus       192 ~~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  261 (335)
T 2owb_A          192 EYDGERKK----------VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP  261 (335)
T ss_dssp             CSTTCCBC----------CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC
T ss_pred             ccCccccc----------ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC
Confidence            43221110          01111122233333  447789999999999999999988876   344444443322   2


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       262 ~~~~~~~~~li~~~l~~dp~~Rps  285 (335)
T 2owb_A          262 KHINPVAASLIQKMLQTDPTARPT  285 (335)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             ccCCHHHHHHHHHHccCChhHCcC
Confidence            233456788888888888777753

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.98  E-value=9.7e-33  Score=225.83  Aligned_cols=224  Identities=16%  Similarity=0.222  Sum_probs=151.5

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---   84 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---   84 (260)
                      ..+.|++.+.||+|+||.||+|++.   ++  .||+|++.......     ....+.+.+|+.++++++||||+ ++   
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-----PEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-----HHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            3566899999999999999999963   22  58999754332221     12356789999999999999999 22   


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      .....++       ++|.+++...  ...+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++
T Consensus        91 ~~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  168 (291)
T 1u46_A           91 LTPPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM  168 (291)
T ss_dssp             CSSSCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             ccCCceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccc
Confidence            2222222       5666666443  235888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      ............        .....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.              
T Consensus       169 ~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~  240 (291)
T 1u46_A          169 RALPQNDDHYVM--------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE  240 (291)
T ss_dssp             EECCC-CCEEEC-------------CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTS
T ss_pred             ccccccccchhh--------hccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHcc
Confidence            766443221100        01111122 2233333  457889999999999999998 765532              


Q ss_pred             -------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcccc
Q psy7935         220 -------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       220 -------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~  253 (260)
                                   +.+++.+|+...+.. |+++.++++.|.++....
T Consensus       241 ~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          241 GERLPRPEDCPQDIYNVMVQCWAHKPED-RPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHC---
T ss_pred             CCCCCCCcCcCHHHHHHHHHHccCCccc-CcCHHHHHHHHHHhCccc
Confidence                         457777777765555 678888888887765443

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.98  E-value=1.3e-32  Score=229.37  Aligned_cols=228  Identities=15%  Similarity=0.206  Sum_probs=159.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-EeCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LDDV----   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~~----   86 (260)
                      ...|++.+.||+|+||.||+|++  +++.||||++....        ......+.+|+.++.++. ||||+ +++.    
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~   98 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--------EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIG   98 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--------HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEEC
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--------hHHHHHHHHHHHHHHHhccCCChhhcccccccc
Confidence            45689999999999999999998  58999999864321        122457889999999996 99999 3221    


Q ss_pred             ------Cch--hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEccCCcEE
Q psy7935          87 ------QKS--AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        87 ------~~~--~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~~~~~k  150 (260)
                            ...  ++      ++|.+++........+++..++.++.|++.||+|||++|  |+||||||+|||++.++.+|
T Consensus        99 ~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~k  178 (337)
T 3ll6_A           99 KEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIK  178 (337)
T ss_dssp             TTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred             ccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEE
Confidence                  111  11      666666654222345899999999999999999999999  99999999999999999999


Q ss_pred             EEeeccccccccccccccccc--ccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc----
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLY--VLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD----  219 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~--~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~----  219 (260)
                      |+|||++..............  ..........+...+.+|+..     ..+++++|+||+|++++++++|..|+.    
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  258 (337)
T 3ll6_A          179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK  258 (337)
T ss_dssp             BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence            999999987654322110000  000000011122223344432     346789999999999999999887642    


Q ss_pred             -------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 -------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 -------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                         +.+++.+|+...+.. |+++.++++.|.++..
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~-Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          259 LRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEE-RLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             -------CCCCTTCCSSGGGHHHHHHHSCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             HHhhcCcccCCcccccchHHHHHHHHHccCChhh-CcCHHHHHHHHHHHHh
Confidence                               567889999876766 6788999999887754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.5e-32  Score=227.95  Aligned_cols=220  Identities=14%  Similarity=0.160  Sum_probs=152.1

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      ...+.|+..+.||+|+||.||+|++.      +..||+|.+....       .......+.+|+.++.+++||||+ +++
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~  113 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-------TEKQRVDFLGEAGIMGQFSHHNIIRLEG  113 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            34456778899999999999999974      2359999864321       111245789999999999999999 222


Q ss_pred             ----CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                          ....++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus       114 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Df  191 (333)
T 1mqb_A          114 VISKYKPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDF  191 (333)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred             EEecCCCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCC
Confidence                222222       4666666543  235888999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccccc------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV------------  218 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~------------  218 (260)
                      |++.............        ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+            
T Consensus       192 g~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~  263 (333)
T 1mqb_A          192 GLSRVLEDDPEATYTT--------SGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI  263 (333)
T ss_dssp             CC-------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             Ccchhhcccccccccc--------CCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence            9997654332111000        0001112 2233333  457889999999999999998 76553            


Q ss_pred             --------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 --------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 --------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                    .+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       264 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          264 NDGFRLPTPMDCPSAIYQLMMQCWQQERAR-RPKFADIVSILDKLI  308 (333)
T ss_dssp             HTTCCCCCCTTCBHHHHHHHHHHTCSSTTT-SCCHHHHHHHHHHHH
T ss_pred             HCCCcCCCcccCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                          2556777777755554 677888888777654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=1.2e-32  Score=231.34  Aligned_cols=195  Identities=18%  Similarity=0.240  Sum_probs=138.1

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ..+.|++.+.||+|+||.||+|++.  |+.||||++...  .     .......+.+|+.++++++||||+ +++.    
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--D-----KPLFALRTLREIKILKHFKHENIITIFNIQRPD   81 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--S-----SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--c-----cchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc
Confidence            3466889999999999999999985  899999986321  1     112245688999999999999999 3321    


Q ss_pred             -----Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeec
Q psy7935          87 -----QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFG  155 (260)
Q Consensus        87 -----~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg  155 (260)
                           ...++      ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        82 ~~~~~~~~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQTDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG  157 (353)
T ss_dssp             CSTTCCCEEEEECCCSEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred             ccCccceEEEEEeccCccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecc
Confidence                 11111      4555555432    48889999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++........................+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  224 (353)
T 2b9h_A          158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP  224 (353)
T ss_dssp             TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCC
Confidence            9987654322111100000001111222223344433   457889999999999999999988765

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=1.4e-32  Score=224.80  Aligned_cols=225  Identities=8%  Similarity=-0.057  Sum_probs=152.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----C
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----V   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~   86 (260)
                      ..+.|++.+.||+|+||.||+|++.  |+.||||++.......     ....+.+.+|+..+.+++||||+ +++    .
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~  103 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP-----DDVLQETLSRTLRLSRIDKPGVARVLDVVHTR  103 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC-----HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC-----HHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC
Confidence            3466999999999999999999995  8999999865433221     12346789999999999999999 332    2


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...     ..+..+..++.|++.||+|||++||+||||||+|||++.++.+||++++... 
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~-  177 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMP-  177 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCT-
T ss_pred             CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccC-
Confidence            22222       4555555332     3445677899999999999999999999999999999999999999776542 


Q ss_pred             ccccccccccccccccceeeeeeeeeecCccccccccc-cceeEeecceeeeeccccccccHHHHHHHHHhhccccCCcc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNH-HLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQ  238 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (260)
                         ..+..+|+|++|..++.+.++..+|.......... ......-............|..+.+++.+|+...+..+  +
T Consensus       178 ---~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R--s  252 (286)
T 3uqc_A          178 ---DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR--S  252 (286)
T ss_dssp             ---TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC--C
T ss_pred             ---CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC--C
Confidence               23455677777777777666666664432211000 00000000000001112234557899999999887775  9


Q ss_pred             HHHHHHHHHHhccccc
Q psy7935         239 FETVMKTFAEVELRGR  254 (260)
Q Consensus       239 ~~~il~~l~~~~~~~r  254 (260)
                      +.++++.|.++.....
T Consensus       253 ~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          253 ASTLLNLMQQATAVAD  268 (286)
T ss_dssp             HHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHHhccCC
Confidence            9999999988765443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=1.6e-32  Score=227.04  Aligned_cols=221  Identities=16%  Similarity=0.205  Sum_probs=149.7

Q ss_pred             cccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----   83 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----   83 (260)
                      ..+.|.+.+.||+|+||.||+|++.     +..||+|.+......      ....+.+.+|+.++++++||||+ +    
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS------QREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC------HHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc------hhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            3456889999999999999999873     347999986433211      11245788999999999999999 2    


Q ss_pred             eCCCch-----hh-------hhHHHhhccCc---ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc
Q psy7935          84 DDVQKS-----AI-------QTLISNLDSQN---ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH  148 (260)
Q Consensus        84 ~~~~~~-----~~-------~~l~~~l~~~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~  148 (260)
                      .+....     ++       ++|.+++....   ....+++..++.++.|++.||.|||++||+||||||+|||++.++.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~  185 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMT  185 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSC
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCc
Confidence            222211     11       46666663221   1345899999999999999999999999999999999999999999


Q ss_pred             EEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-ccccc------
Q psy7935         149 LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAV------  218 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~------  218 (260)
                      +||+|||++...........         .....+.+.| +|+..  ..+++++|+||+|++++++++ |..|+      
T Consensus       186 ~kl~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~  256 (313)
T 3brb_A          186 VCVADFGLSKKIYSGDYYRQ---------GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH  256 (313)
T ss_dssp             EEECSCSCC-------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred             EEEeecCcceecccccccCc---------ccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence            99999999976543321110         0111222223 33333  457889999999999999999 65442      


Q ss_pred             --------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 --------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 --------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                          .+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLD-RPTFSVLRLQLEKLL  307 (313)
T ss_dssp             GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence                                2456777777755554 567777777777653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=2.6e-32  Score=227.81  Aligned_cols=221  Identities=16%  Similarity=0.168  Sum_probs=158.0

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC   82 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~   82 (260)
                      ...+.|++.+.||+|+||.||+|++.         +..||+|++....       .......+.+|+.+++++ +||||+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv  104 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNII  104 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-------CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-------cHHHHHHHHHHHHHHHHhhcCCCEe
Confidence            44567889999999999999999973         5679999854221       111246788999999999 899999


Q ss_pred             -EeC----CCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          83 -LDD----VQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        83 -~~~----~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                       +++    ....++       ++|.+++.....             ...+++..++.++.|++.||+|||++||+|||||
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlk  184 (334)
T 2pvf_A          105 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLA  184 (334)
T ss_dssp             CEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred             eEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCc
Confidence             222    222222       577777765421             1247889999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-  213 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-  213 (260)
                      |+|||++.++.+||+|||++............         ....+.+ +.+|+..  ..++.++|+||+|++++++++ 
T Consensus       185 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~  255 (334)
T 2pvf_A          185 ARNVLVTENNVMKIADFGLARDINNIDYYKKT---------TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL  255 (334)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECTTTSSEECC---------SCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEcCCCCEEEcccccccccccccccccc---------CCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999765433211100         0001112 2333333  457889999999999999998 


Q ss_pred             cccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         214 EDKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       214 ~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      |..|+.                          +.+++.+|+...+.. |+++.++++.|.++.
T Consensus       256 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          256 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQ-RPTFKQLVEDLDRIL  317 (334)
T ss_dssp             SCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence            655432                          456777777766655 577788887777664

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=9.2e-33  Score=231.71  Aligned_cols=227  Identities=15%  Similarity=0.147  Sum_probs=153.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||||++........   .......+.+|+.++++++||||+ +++    ..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA---KDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchh---hhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            356889999999999999999984  88999998643321110   011124678999999999999999 322    22


Q ss_pred             chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++      ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        86 ~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           86 NISLVFDFMETDLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             ceEEEEEcCCCCHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            2222      4455555433  2357888889999999999999999999999999999999999999999999997664


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      .......          ...++..+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+.++.....   
T Consensus       164 ~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~  233 (346)
T 1ua2_A          164 SPNRAYT----------HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT  233 (346)
T ss_dssp             SCCCCCC----------CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             CCcccCC----------cccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            3321111          11112223334433   237889999999999999999877654   3333333333210   


Q ss_pred             ----------------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ----------------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ----------------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                  ...++.+.+++.+|...++..|..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          234 EEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             TTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             hhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence                                        112356778888888888888864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=8.7e-33  Score=225.57  Aligned_cols=222  Identities=14%  Similarity=0.137  Sum_probs=158.1

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  +..||+|++....     .........+.+|++++++++||||+ +    .+..
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC
Confidence            356889999999999999999984  7889999864321     11112246788999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++...
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            2222       4566665443   25788999999999999999999999999999999999999999999999998654


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---c
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---R  232 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~  232 (260)
                      ......            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+....   +
T Consensus       165 ~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  232 (284)
T 2vgo_A          165 PSLRRR------------TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP  232 (284)
T ss_dssp             SSSCBC------------CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC
T ss_pred             cccccc------------cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC
Confidence            332111            00111112233322  447889999999999999999988875   333334443322   2


Q ss_pred             ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...++.+.+++.+|...++..|..
T Consensus       233 ~~~~~~~~~li~~~l~~~p~~Rps  256 (284)
T 2vgo_A          233 PFLSDGSKDLISKLLRYHPPQRLP  256 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CcCCHHHHHHHHHHhhcCHhhCCC
Confidence            233456677777777777777754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=4.9e-33  Score=232.96  Aligned_cols=217  Identities=17%  Similarity=0.148  Sum_probs=158.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-E----eCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-L----DDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~----~~~   86 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||+|++.....            ...+|++++.++ +||||+ +    .+.
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------~~~~E~~~l~~~~~hp~iv~~~~~~~~~   88 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------------DPTEEIEILLRYGQHPNIITLKDVYDDG   88 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------------CCHHHHHHHHHHTTSTTBCCEEEEEECS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------------ChHHHHHHHHHhcCCCCcCeEEEEEEcC
Confidence            345888999999999999999984  88999998654321            134677888777 799999 2    222


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC----CcEEEEeec
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD----HHLVMIDFG  155 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~----~~~kl~DFg  155 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||+..+    +.+||+|||
T Consensus        89 ~~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg  165 (342)
T 2qr7_A           89 KYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFG  165 (342)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence            22222       4555555432   358999999999999999999999999999999999998542    359999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc------HHHHHHHH
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWI  227 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~  227 (260)
                      ++..........          .+..+...+.+|+..  ..++.++|+||+|++++++++|..|+.      ..+++..+
T Consensus       166 ~a~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i  235 (342)
T 2qr7_A          166 FAKQLRAENGLL----------MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI  235 (342)
T ss_dssp             TCEECBCTTCCB----------CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH
T ss_pred             CcccCcCCCCce----------eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH
Confidence            997654432111          111222233344444  347889999999999999999988874      45666666


Q ss_pred             Hhhcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+..       ...++.+.+++.+|...++..|..
T Consensus       236 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t  271 (342)
T 2qr7_A          236 GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT  271 (342)
T ss_dssp             HHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             ccCCcccCccccccCCHHHHHHHHHHCCCChhHCcC
Confidence            65432       233567788999999888888864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=1.1e-32  Score=227.98  Aligned_cols=223  Identities=17%  Similarity=0.180  Sum_probs=158.4

Q ss_pred             cccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      ....+.|++.+.||+|+||.||+|++       +++.||||++....       .......+.+|+.++.++ +||||+ 
T Consensus        23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-------CcHHHHHHHHHHHHHHhcccCCCeee
Confidence            34456789999999999999999985       25789999864321       111245788999999999 689999 


Q ss_pred             EeC---CCc--hhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          83 LDD---VQK--SAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        83 ~~~---~~~--~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                      +++   ...  .++       ++|.+++.....             ...+++..++.++.|++.||.|||++||+|||||
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik  175 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  175 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence            322   222  122       577777755431             1127899999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-c
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-E  214 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~  214 (260)
                      |+|||++.++.+||+|||++............        ....+...+.+|+..  ..++.++|+||+|++++++++ |
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g  247 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRK--------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  247 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEE--------TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             cceEEECCCCCEEECCCccccccccCccceec--------cCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCC
Confidence            99999999999999999999765433211100        011111223344433  457889999999999999998 6


Q ss_pred             ccccc---------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         215 DKAVD---------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       215 ~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      ..|+.                           ..+++.+|+...+.. |+++.++++.|..+.
T Consensus       248 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~~~  309 (316)
T 2xir_A          248 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ-RPTFSELVEHLGNLL  309 (316)
T ss_dssp             CCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHHH
Confidence            65532                           456666677655555 567777777776654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=2.7e-32  Score=230.13  Aligned_cols=193  Identities=17%  Similarity=0.252  Sum_probs=137.5

Q ss_pred             cccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCc---hhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHP---KLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ..+.|++.+.||+|+||.||+|.+ .|+.||||++........   ........+.+.+|+.++++++||||+ +++.  
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   99 (362)
T 3pg1_A           20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV   99 (362)
T ss_dssp             TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred             hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence            346689999999999999999998 488999998654432211   122333357799999999999999999 2211  


Q ss_pred             --C---chhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          87 --Q---KSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        87 --~---~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                        .   ...+        ++|.+++...  ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D  177 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD  177 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             eccCCCcceEEEEEccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence              1   1112        5555555433  23588999999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++..........           ...+...+.+|+..   ..+++++|+||+|++++++++|..|+.
T Consensus       178 fg~~~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  235 (362)
T 3pg1_A          178 FNLAREDTADANKT-----------HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR  235 (362)
T ss_dssp             TTC--------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             cCcccccccccccc-----------eecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence            99997543322110           11111222333332   457889999999999999999988876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.3e-32  Score=222.47  Aligned_cols=217  Identities=16%  Similarity=0.152  Sum_probs=152.7

Q ss_pred             ccccCcce-eeccCCceeEEEEEE----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          15 DMVLQPAE-CFKQGAEGRIFKTEY----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        15 ~~~~~~~~-~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.+.+.+ .||+|+||.||+|.+    .+..||+|++....       .....+.+.+|++++++++||||+ +++   
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   80 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ   80 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-------chhHHHHHHHHHHHHHhCCCCCEeEEEEEec
Confidence            34455566 999999999999986    37789999864321       112356789999999999999999 222   


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~  158 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK  158 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECccccee
Confidence            222222       5677776543  2458899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------  219 (260)
                      ............        ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.               
T Consensus       159 ~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~  230 (287)
T 1u59_A          159 ALGADDSYYTAR--------SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK  230 (287)
T ss_dssp             ECTTCSCEECCC--------CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC
T ss_pred             eeccCcceeecc--------ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCC
Confidence            664332211100        0001112 2233333  457889999999999999998 776643               


Q ss_pred             -----------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 -----------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 -----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                 +.+++.+|+...+.. |+++.++++.+.++
T Consensus       231 ~~~~~~~~~~~l~~li~~~l~~~p~~-Rps~~~l~~~l~~~  270 (287)
T 1u59_A          231 RMECPPECPPELYALMSDCWIYKWED-RPDFLTVEQRMRAC  270 (287)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             cCCCCCCcCHHHHHHHHHHcCCChhh-CcCHHHHHHHHHHH
Confidence                       344555666544443 45666666666544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=4.9e-33  Score=238.12  Aligned_cols=185  Identities=15%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             cCc-ceeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          18 LQP-AECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        18 ~~~-~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      |++ .++||+|+||.||+|++.    ++.||||++.....          ...+.+|+.++++++||||+     +.+..
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHA   91 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----------CHHHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----------CHHHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence            443 458999999999999963    78999998643221          23578899999999999999     22222


Q ss_pred             chhh--------hhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE----ccCCcE
Q psy7935          88 KSAI--------QTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL----SSDHHL  149 (260)
Q Consensus        88 ~~~~--------~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill----~~~~~~  149 (260)
                      ...+        ++|.+++.....      ...+++..++.++.|++.||+|||++||+||||||+|||+    +.++.+
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           92 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            2222        444444432110      1238889999999999999999999999999999999999    668999


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||+|||+++...........       .....++..+.+|+.+   ..++.++|+||+|++++++++|..|+.
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~  237 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLAD-------LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH  237 (405)
T ss_dssp             EECCTTCCC-----------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             EEEECCCceecCCCCccccc-------CCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence            99999999876543211110       0111222223344433   347889999999999999999988773

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.8e-33  Score=236.80  Aligned_cols=224  Identities=18%  Similarity=0.196  Sum_probs=157.0

Q ss_pred             cccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD----   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~----   84 (260)
                      +.|++.+.||+|+||.||+|++     +++.||||++........    ....+.+.+|+.++.++ .||||+ ++    
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  129 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK----AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ  129 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE----ESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhh----hhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence            5689999999999999999998     588999998643221100    00123466788999999 699998 22    


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      +....++       ++|.+++...   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       130 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          130 TETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eCceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            2222222       4555555432   35888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc-------HHHHHHH
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNW  226 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~  226 (260)
                      +...........         ...++..+.+|+..    ..++.++|+||+|++++++++|..|+.       ...+...
T Consensus       207 ~~~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  277 (355)
T 1vzo_A          207 KEFVADETERAY---------DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR  277 (355)
T ss_dssp             EECCGGGGGGGC---------GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH
T ss_pred             eecccCCCCccc---------CcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHH
Confidence            765433221110         11112222333333    346789999999999999999998874       3444445


Q ss_pred             HHhhc---cccCCccHHHHHHHHHHhcccccc
Q psy7935         227 ILSSY---RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       227 ~~~~~---~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +....   +...++.+.+++.+|...++..|.
T Consensus       278 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  309 (355)
T 1vzo_A          278 ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL  309 (355)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGST
T ss_pred             HhccCCCCCcccCHHHHHHHHHHhhhCHHHhc
Confidence            44432   233345678888888888888887

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=1.4e-32  Score=223.28  Aligned_cols=223  Identities=17%  Similarity=0.139  Sum_probs=156.4

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||||++....     .........+.+|+.+++.++||||+ ++    +..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT   84 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            356888999999999999999984  8999999864322     11222345788999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.+||+|||++...
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             eEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            2222       4555555432   25788999999999999999999999999999999999999999999999998765


Q ss_pred             cccccccccccccccceeeeeeeeeecCccccc---cccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ---SYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---  231 (260)
                      .......           ...+...+.+|+...   ..++++|+||+|++++++++|..|+.   ..+..+.+..+.   
T Consensus       162 ~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  230 (276)
T 2h6d_A          162 SDGEFLR-----------TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYI  230 (276)
T ss_dssp             CC------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC
T ss_pred             CCCccee-----------cccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccC
Confidence            4322110           111222233444332   23678999999999999999988865   344444444332   


Q ss_pred             cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +...++.+.+++.+|...++..|..
T Consensus       231 ~~~~~~~l~~li~~~l~~~p~~Rps  255 (276)
T 2h6d_A          231 PEYLNRSVATLLMHMLQVDPLKRAT  255 (276)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             chhcCHHHHHHHHHHccCChhhCCC
Confidence            2223456677777777777777653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=5.5e-33  Score=228.84  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=155.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|.+  +++.||+|++......    ........+.+|+.++++++||||+ +++    ...
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR----RIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK   80 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH----HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC--
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc----ccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC
Confidence            5688899999999999999998  4889999986433211    0012346789999999999999999 322    222


Q ss_pred             hhhhh--------HHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          89 SAIQT--------LISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        89 ~~~~~--------l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...+.        +.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus        81 ~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           81 QKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             -CEEEEEECCSEEHHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CeEEEEehhccCCHHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence            22222        333333322 345888999999999999999999999999999999999999999999999999765


Q ss_pred             cccccccccccccccceeeeeeeeeec-Ccccc----ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc-
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY-  231 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~-  231 (260)
                      .........         ....+.+.| +|+..    ...+.++|+||+|++++++++|..|+.   ..+..+.+..+. 
T Consensus       160 ~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~  230 (305)
T 2wtk_C          160 HPFAADDTC---------RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY  230 (305)
T ss_dssp             CTTCSSCEE---------CCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC
T ss_pred             Ccccccccc---------ccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC
Confidence            432211100         001122222 33322    234678999999999999999988866   344444443322 


Q ss_pred             --cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        +...++.+.+++.+|...++..|..
T Consensus       231 ~~~~~~~~~l~~li~~~l~~dp~~Rps  257 (305)
T 2wtk_C          231 AIPGDCGPPLSDLLKGMLEYEPAKRFS  257 (305)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             CCCCccCHHHHHHHHHHccCChhhCCC
Confidence              2223455667777777777666653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=5.6e-33  Score=225.94  Aligned_cols=223  Identities=16%  Similarity=0.184  Sum_probs=144.5

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +|++||+|++....     .......+.+.+|+.++++++||||+ +    .+...
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCe
Confidence            3588899999999999999998  58999999864322     11111246788999999999999999 2    22222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...  ...+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++....
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            222       4566665543  2458899999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccccH---HHHHHHHHhh---ccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVDF---RDMFNWILSS---YRR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~~---~~~~~~~~~~---~~~  233 (260)
                      .......          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+..   .+........   .+.
T Consensus       164 ~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  233 (278)
T 3cok_A          164 MPHEKHY----------TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS  233 (278)
T ss_dssp             --------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCT
T ss_pred             CCCCcce----------eccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCcc
Confidence            3321110          11111122233333  4567899999999999999999877651   1222211111   112


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..++.+.+++.+|...++..|.
T Consensus       234 ~~~~~~~~li~~~l~~dp~~Rp  255 (278)
T 3cok_A          234 FLSIEAKDLIHQLLRRNPADRL  255 (278)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSC
T ss_pred             ccCHHHHHHHHHHcccCHhhCC
Confidence            2234456666666666666554

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.2e-32  Score=244.07  Aligned_cols=209  Identities=15%  Similarity=0.160  Sum_probs=147.5

Q ss_pred             eeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCchhh---
Q psy7935          23 CFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKSAI---   91 (260)
Q Consensus        23 ~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~~~---   91 (260)
                      .||+|+||.||+|.+.    +..||||++.....  .     ...+.+.+|+.++++++||||+ +++   ....++   
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~-----~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E  415 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE--K-----ADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME  415 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS--S-----TTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC--h-----HHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEE
Confidence            7999999999999873    55799998643211  1     1246789999999999999999 222   222222   


Q ss_pred             ----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccccccc
Q psy7935          92 ----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA  167 (260)
Q Consensus        92 ----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~  167 (260)
                          ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.........
T Consensus       416 ~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~  493 (613)
T 2ozo_A          416 MAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY  493 (613)
T ss_dssp             CCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------
T ss_pred             eCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCcee
Confidence                5666666543  3458899999999999999999999999999999999999999999999999997654332111


Q ss_pred             ccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc------------------------
Q psy7935         168 VDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD------------------------  219 (260)
Q Consensus       168 ~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~------------------------  219 (260)
                      +.        .....+.+.| +|+..  ..++.++|+||||++++++++ |..|+.                        
T Consensus       494 ~~--------~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  565 (613)
T 2ozo_A          494 TA--------RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP  565 (613)
T ss_dssp             ----------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCC
T ss_pred             ee--------ccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCC
Confidence            00        0011111223 33333  568899999999999999998 765532                        


Q ss_pred             --HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 --FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 --~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                        +.+++.+|+...+.. |+++.++++.|..+
T Consensus       566 ~~l~~li~~cl~~dP~~-RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          566 PELYALMSDCWIYKWED-RPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHHHHHHTTCSSTTT-SCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhH-CcCHHHHHHHHHHH
Confidence              445666666644444 56777777776654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=5.2e-32  Score=222.96  Aligned_cols=186  Identities=21%  Similarity=0.269  Sum_probs=140.4

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      ....+.|++.+.||+|+||.||+|++.  ++.||+|++.......       ..+.+.+|+.++++++||||+ +++   
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~   90 (303)
T 3a7i_A           18 ADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED-------EIEDIQQEITVLSQCDSPYVTKYYGSYL   90 (303)
T ss_dssp             ECGGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST-------THHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CChHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH-------HHHHHHHHHHHHHhCCCCCEeEEEEEEe
Confidence            445567899999999999999999984  8899999875443211       246788999999999999999 222   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...    .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~  166 (303)
T 3a7i_A           91 KDTKLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA  166 (303)
T ss_dssp             ETTEEEEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             cCCeEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccc
Confidence             222222       4566666543    4888999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...........          .. .+.+.| +|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       167 ~~~~~~~~~~~----------~~-~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  220 (303)
T 3a7i_A          167 GQLTDTQIKRN----------TF-VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHS  220 (303)
T ss_dssp             EECBTTBCCBC----------CC-CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             eecCccccccC----------cc-CCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCC
Confidence            76544321110          01 112222 33322  457789999999999999999987754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=4.4e-32  Score=229.67  Aligned_cols=222  Identities=17%  Similarity=0.222  Sum_probs=153.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~~   89 (260)
                      +.|.+.+.||+|+||.||+|.+.  |+.||||++....      ........+.+|+.+++.++||||+    ++.....
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  115 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS  115 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc------cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC
Confidence            56888999999999999999984  8999999864322      1122356788999999999999999    2222111


Q ss_pred             h-----hhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 A-----IQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~-----~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .     .+.+++++.+...   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       116 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          116 LRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             STTCCCCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             cccceeEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            1     1223333332100   2348899999999999999999999999999999999999999999999999997553


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh-----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS-----  230 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~-----  230 (260)
                      .....             ..+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..+...     
T Consensus       196 ~~~~~-------------~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  262 (371)
T 4exu_A          196 AEMTG-------------YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG  262 (371)
T ss_dssp             ----C-------------TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cCcCC-------------cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc
Confidence            32111             0111122233322   357889999999999999999998876   22333332221     


Q ss_pred             -----------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -----------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -----------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                   .....++.+.+++.+|...++..|..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  317 (371)
T 4exu_A          263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT  317 (371)
T ss_dssp             HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC
Confidence                                         01123566788888888888888764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=1.7e-32  Score=246.45  Aligned_cols=181  Identities=18%  Similarity=0.225  Sum_probs=131.4

Q ss_pred             eeeccCCceeEEEEEE----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eCCCchhh--
Q psy7935          22 ECFKQGAEGRIFKTEY----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DDVQKSAI--   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~~~~~~~--   91 (260)
                      +.||+|+||.||+|.+    .++.||||++.....      .....+.+.+|+.++.+++||||+ +   +.....++  
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~  448 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN------DPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVM  448 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG------CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEE
Confidence            4799999999999976    257899998643221      112256799999999999999999 2   22222222  


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus       449 E~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          449 EMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             ECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             EccCCCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence                 5666666543   35888999999999999999999999999999999999999999999999999766443211


Q ss_pred             cccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      ...        .+...+.+.| +|+..  ..++.++|+||||++++++++ |..|+.
T Consensus       526 ~~~--------~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~  574 (635)
T 4fl3_A          526 YKA--------QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR  574 (635)
T ss_dssp             -----------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             ccc--------ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            100        0111112223 34433  468899999999999999998 776653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=3.2e-33  Score=238.39  Aligned_cols=219  Identities=16%  Similarity=0.260  Sum_probs=153.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC------
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV------   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~------   86 (260)
                      ...|++.+.||+|+||.||+|++. +..+|+|.+.....            ...+|+++++.++||||+ +++.      
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------------~~~~E~~il~~l~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------FKNRELQIMRIVKHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------------SCCHHHHHHHTCCCTTBCCEEEEEEEESS
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------------hHHHHHHHHHhCCCCCcceEEEEEEecCC
Confidence            345889999999999999999994 66699998643221            123689999999999999 2221      


Q ss_pred             --CchhhhhHHHhhccCc---------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc-cCCcEEEEee
Q psy7935          87 --QKSAIQTLISNLDSQN---------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS-SDHHLVMIDF  154 (260)
Q Consensus        87 --~~~~~~~l~~~l~~~~---------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~-~~~~~kl~DF  154 (260)
                        ....++.+++|+.+..         ....+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+||
T Consensus       107 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DF  186 (394)
T 4e7w_A          107 KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF  186 (394)
T ss_dssp             SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeC
Confidence              1112233444443321         134588899999999999999999999999999999999999 7999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHH
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWIL  228 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~  228 (260)
                      |+++.........           ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..+.
T Consensus       187 G~a~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~  255 (394)
T 4e7w_A          187 GSAKILIAGEPNV-----------SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEII  255 (394)
T ss_dssp             TTCEECCTTCCCC-----------SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCcccccCCCCCc-----------ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9997654332211           11122223344433   347899999999999999999988876   222222222


Q ss_pred             hh--------------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         229 SS--------------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~--------------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..                                .+...++.+.+++.+|...++..|..
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (394)
T 4e7w_A          256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT  315 (394)
T ss_dssp             HHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC
Confidence            11                                11123456778888888888888764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=8.6e-33  Score=229.08  Aligned_cols=229  Identities=16%  Similarity=0.230  Sum_probs=154.5

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      .....+.|++.+.||+|+||.||+|++.+ .+|+|++.........      .+.+.+|+.++++++||||+     +.+
T Consensus        28 ~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~------~~~~~~e~~~l~~l~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQ------LKAFKREVMAYRQTRHENVVLFMGACMS  100 (319)
T ss_dssp             SSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCC------CCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred             ccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHH------HHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            34455678999999999999999999876 5999986544322111      23467899999999999999     222


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..++.++.|++.||+|||++|++||||||+|||++ ++.+||+|||++.
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~  177 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFS  177 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred             CCceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcc
Confidence            222222       5666666543  23578889999999999999999999999999999999998 6899999999986


Q ss_pred             cccccccccccccccccceeeeeeeee-ecCcccc-----------ccccccceeEeecceeeeeccccccc--------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL-----------QSYNHHLVMIDFGLSQIKVSTEDKAV--------  218 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~~~di~s~g~~~~~~~~~~~~~--------  218 (260)
                      ............     .. ....+.+ +.+|+..           ..++.++|+||+|++++++++|..|+        
T Consensus       178 ~~~~~~~~~~~~-----~~-~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  251 (319)
T 2y4i_B          178 ISGVLQAGRRED-----KL-RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI  251 (319)
T ss_dssp             ----------CC-----SC-BCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH
T ss_pred             cccccccccccc-----cc-ccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            543221110000     00 0001111 1222222           24688999999999999999987653        


Q ss_pred             -------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhccccccc
Q psy7935         219 -------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       219 -------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                         .+.+++.+|+...+.. |+++.++++.|.++..+.+..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~-Rpt~~~l~~~l~~l~~~~~~~  307 (319)
T 2y4i_B          252 IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEE-RPTFTKLMDMLEKLPKRNRRL  307 (319)
T ss_dssp             HHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTT-SCCHHHHHHHHTTC-------
T ss_pred             HHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhh-CcCHHHHHHHHHHHHHhhccC
Confidence                               3567888888866665 678888888888877666554

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=1.6e-32  Score=231.39  Aligned_cols=189  Identities=20%  Similarity=0.268  Sum_probs=140.9

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      .+.....+.|++.+.||+|+||.||+|++.  ++.||+|++....       .......+.+|+.++++++||||+ +++
T Consensus        26 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~   98 (360)
T 3eqc_A           26 KVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYG   98 (360)
T ss_dssp             TCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-------CHHHHHHHHHHHGGGGGCCCTTBCCEEE
T ss_pred             cccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-------CHHHHHHHHHHHHHHHHCCCCCEEEEeE
Confidence            344556677999999999999999999995  8899999865431       112356789999999999999999 322


Q ss_pred             ----CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEe
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                          ....++       ++|.+++...   ..+++..+..++.|++.||+|||++ ||+||||||+|||++.++.+||+|
T Consensus        99 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~D  175 (360)
T 3eqc_A           99 AFYSDGEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCD  175 (360)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEECCEEEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEE
Confidence                222222       3555555432   2588899999999999999999996 999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++.........            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       176 fg~~~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  231 (360)
T 3eqc_A          176 FGVSGQLIDSMAN------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  231 (360)
T ss_dssp             CCCCHHHHHHC----------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSS
T ss_pred             CCCCccccccccc------------CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence            9998654322110            11111222233333  457889999999999999999988764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=231.53  Aligned_cols=220  Identities=9%  Similarity=0.093  Sum_probs=154.3

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc----------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL----------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ....+.|++.+.||+|+||.||+|++.          ++.||+|++...             ..+.+|++++++++||||
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------~~~~~E~~~l~~l~h~ni  104 (352)
T 2jii_A           38 DKSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------GRLFNEQNFFQRAAKPLQ  104 (352)
T ss_dssp             CTTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------STHHHHHHHHHHHCCHHH
T ss_pred             cccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------chHHHHHHHHHHhcccch
Confidence            344577999999999999999999983          689999986432             247789999999999988


Q ss_pred             E-Ee----C----------------CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceec
Q psy7935          82 C-LD----D----------------VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHG  134 (260)
Q Consensus        82 ~-~~----~----------------~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~  134 (260)
                      + ++    .                ....++      ++|.+++.... ...+++..++.++.|++.||+|||++||+||
T Consensus       105 v~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~  183 (352)
T 2jii_A          105 VNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHG  183 (352)
T ss_dssp             HHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCS
T ss_pred             hhhhhhhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCC
Confidence            6 11    0                111111      56666665432 3468999999999999999999999999999


Q ss_pred             CCCCCcEEEccCC--cEEEEeecccccccccccccccccccccceeeeeeeeee-cCcccc--ccccccceeEeecceee
Q psy7935         135 DLTTSNMILSSDH--HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYC-WSKGTL--QSYNHHLVMIDFGLSQI  209 (260)
Q Consensus       135 dlkp~Nill~~~~--~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~di~s~g~~~~  209 (260)
                      ||||+|||++.++  .+||+|||+++............    ........+.+. .+|+..  ..++.++|+||+|++++
T Consensus       184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  259 (352)
T 2jii_A          184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYV----EGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML  259 (352)
T ss_dssp             CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCC----TTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCceEEEecCcceeeccCCCcccccc----ccccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence            9999999999988  99999999997765432211000    000011122222 333333  35788999999999999


Q ss_pred             eecccccccc------------------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         210 KVSTEDKAVD------------------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       210 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      ++++|..|+.                                    +.+++.+|+...+.. |+++.++++.|.++.
T Consensus       260 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          260 KWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE-KPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC-CCCHHHHHHHHHHHH
T ss_pred             HHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh-CCCHHHHHHHHHHHH
Confidence            9999886643                                    345666666644444 566666666666554

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=2.9e-32  Score=228.05  Aligned_cols=217  Identities=15%  Similarity=0.154  Sum_probs=155.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcc--cCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK--CRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~--~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|+++|+.||||++...           ....+.+|.+++..  ++||||+ ++    ...
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~  109 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-----------EERSWFREAEIYQTVMLRHENILGFIAADNKDN  109 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-----------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred             cccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-----------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence            356889999999999999999999999999985321           13456778888776  7899999 22    222


Q ss_pred             ----chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhh--------hCCceecCCCCCcEEEccCCc
Q psy7935          88 ----KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMH--------SNNIIHGDLTTSNMILSSDHH  148 (260)
Q Consensus        88 ----~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~i~H~dlkp~Nill~~~~~  148 (260)
                          ..++       ++|.+++...    .+++..++.++.|++.||+|||        +++|+||||||+|||++.++.
T Consensus       110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~  185 (342)
T 1b6c_B          110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT  185 (342)
T ss_dssp             SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSC
T ss_pred             CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCC
Confidence                1122       4677766543    4888999999999999999999        899999999999999999999


Q ss_pred             EEEEeecccccccccccccccccccccceeeeeeeeeecCccccc--------cccccceeEeecceeeeeccc------
Q psy7935         149 LVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ--------SYNHHLVMIDFGLSQIKVSTE------  214 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~di~s~g~~~~~~~~~------  214 (260)
                      +||+|||++............  ...    ...+...+.+|+...        .+++++|+||+|++++++++|      
T Consensus       186 ~kL~Dfg~~~~~~~~~~~~~~--~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  259 (342)
T 1b6c_B          186 CCIADLGLAVRHDSATDTIDI--APN----HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI  259 (342)
T ss_dssp             EEECCCTTCEEEETTTTEEEE--CCC----SCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTB
T ss_pred             EEEEECCCceecccccccccc--ccc----cCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCc
Confidence            999999999765443211000  000    011111222333221        344789999999999999988      


Q ss_pred             ----cccc-------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhcccc
Q psy7935         215 ----DKAV-------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRG  253 (260)
Q Consensus       215 ----~~~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~  253 (260)
                          ..|+                                     .+.+++.+|+...+.. |+++.++++.|.++....
T Consensus       260 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~-Rps~~~i~~~L~~i~~~~  338 (342)
T 1b6c_B          260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA-RLTALRIKKTLSQLSQQE  338 (342)
T ss_dssp             CCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGG-SCCHHHHHHHHHHHHHTT
T ss_pred             ccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhh-CCCHHHHHHHHHHHHHHh
Confidence                3332                                     1346778888766665 678888888888876543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=4.3e-33  Score=232.78  Aligned_cols=191  Identities=17%  Similarity=0.081  Sum_probs=134.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC---------CCCeE-Ee
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR---------MADIC-LD   84 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~---------h~~i~-~~   84 (260)
                      .+.|++.+.||+|+||.||+|+++|+.||||++................+.+.+|+.+++.++         ||||+ +.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            356888999999999999999999999999997655432111111112356778888877775         66665 22


Q ss_pred             CC--------------------------------CchhhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhh
Q psy7935          85 DV--------------------------------QKSAIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMH  127 (260)
Q Consensus        85 ~~--------------------------------~~~~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH  127 (260)
                      +.                                ....++.++||+.+..+     ...+++..++.++.|++.||+|||
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH  178 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE  178 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            11                                12233445666544322     235789999999999999999999


Q ss_pred             -hCCceecCCCCCcEEEccCC--------------------cEEEEeecccccccccccccccccccccceeeeeeeeee
Q psy7935         128 -SNNIIHGDLTTSNMILSSDH--------------------HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYC  186 (260)
Q Consensus       128 -~~~i~H~dlkp~Nill~~~~--------------------~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  186 (260)
                       ++||+||||||+|||++.++                    .+||+|||+|+.........+.               .+
T Consensus       179 ~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~---------------~y  243 (336)
T 2vuw_A          179 ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCD---------------VS  243 (336)
T ss_dssp             HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCC---------------CT
T ss_pred             HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEee---------------cc
Confidence             99999999999999999987                    9999999999876543211222               22


Q ss_pred             cCcccc-ccccccceeEeecce-eeeeccccccccH
Q psy7935         187 WSKGTL-QSYNHHLVMIDFGLS-QIKVSTEDKAVDF  220 (260)
Q Consensus       187 ~~~~~~-~~~~~~~di~s~g~~-~~~~~~~~~~~~~  220 (260)
                      .+|+.+ +..+.++|+||++++ ..++.++..|+..
T Consensus       244 ~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          244 MDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             TCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             cChhhhcCCCccceehhhhhCCCCcccccccCCCcc
Confidence            233333 334789999998766 6777788777763

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=7e-33  Score=225.40  Aligned_cols=225  Identities=16%  Similarity=0.187  Sum_probs=158.5

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++.+.||+|+||.||+|++  +++.||+|.+......      ....+.+.+|+.++++++||||+ +++    ...
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT------EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN   79 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC
Confidence            4577889999999999999998  4889999987543321      12356789999999999999999 333    222


Q ss_pred             hhh---------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCC-----ceecCCCCCcEEEccCCcEEEEe
Q psy7935          89 SAI---------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNN-----IIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        89 ~~~---------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~-----i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      ...         ++|.+++..... ...+++..++.++.|++.||+|||+++     |+||||||+|||++.++.+||+|
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~d  159 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD  159 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECC
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence            222         355555543211 234889999999999999999999999     99999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHH
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWIL  228 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~  228 (260)
                      ||++...........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+.
T Consensus       160 fg~~~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~  229 (279)
T 2w5a_A          160 FGLARILNHDTSFAK----------TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR  229 (279)
T ss_dssp             CCHHHHC---CHHHH----------HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             Cchheeecccccccc----------ccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHh
Confidence            999876543321100          00011112233322  347789999999999999999988865   344455554


Q ss_pred             hhcc----ccCCccHHHHHHHHHHhccccccc
Q psy7935         229 SSYR----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~~~----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..    ...++.+.+++.+|...++..|..
T Consensus       230 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps  261 (279)
T 2w5a_A          230 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPS  261 (279)
T ss_dssp             HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hcccccCCcccCHHHHHHHHHHcCCCcccCCC
Confidence            4332    233566788888888888877753

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=6.8e-32  Score=225.04  Aligned_cols=190  Identities=17%  Similarity=0.230  Sum_probs=134.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      ..+.|++.+.||+|+||.||+|++.  |+.||+|++.....      .....+.+.+|+.++++++||||+ +++.  ..
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD------DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK   96 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC------chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC
Confidence            4456889999999999999999984  88999998644321      112246688999999999999999 3222  11


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ...+.+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             CEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence            112223333332211      23588999999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......          ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       177 ~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  226 (331)
T 4aaa_A          177 PGEVYD----------DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP  226 (331)
T ss_dssp             -----------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CccccC----------CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCC
Confidence            321110          01111122233333   257889999999999999999988765

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=2.7e-32  Score=222.42  Aligned_cols=188  Identities=16%  Similarity=0.189  Sum_probs=137.2

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||+|++.........  .....+.+.+|+.++++++||||+     +.+...
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR--RGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc--cchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            45778899999999999999994  889999987655432211  111246789999999999999999     222222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----cEEEEeeccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----HLVMIDFGLS  157 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----~~kl~DFg~~  157 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+||+++.++    .+||+|||++
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~  159 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA  159 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence            222       4566665432   3588999999999999999999999999999999999999876    8999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       160 ~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  212 (283)
T 3bhy_A          160 HKIEAGNEFK-----------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  212 (283)
T ss_dssp             EECC-------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred             eeccCCCccc-----------ccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCC
Confidence            7654332111           01111112233322  457889999999999999999987754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=3e-32  Score=225.66  Aligned_cols=223  Identities=17%  Similarity=0.208  Sum_probs=150.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-----   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-----   86 (260)
                      .+.|++.+.||+|+||.||+|.+.  |+.||+|++....        ....+.+.+|+.++++++||||+ +++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--------PQSVKHALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--------HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--------hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            456889999999999999999995  8999999864321        11246788999999999999999 3321     


Q ss_pred             -------------Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc-cC
Q psy7935          87 -------------QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS-SD  146 (260)
Q Consensus        87 -------------~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~-~~  146 (260)
                                   ...++      ++|.+++...    .+++..++.++.|++.||+|||++||+||||||+|||++ .+
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             cccccccccccccCceeEEeeccCCCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence                         11111      5566666443    478889999999999999999999999999999999997 47


Q ss_pred             CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---H
Q psy7935         147 HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---F  220 (260)
Q Consensus       147 ~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~  220 (260)
                      +.+||+|||++.............       ....+...+.+|+..   ..++.++|+||+|++++++++|..|+.   .
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  230 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHL-------SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE  230 (320)
T ss_dssp             TEEEECCCTTCBCC--------CC-------CGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CeEEEccCccccccCCCccccccc-------ccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH
Confidence            799999999997654322111000       000111122333332   457889999999999999999988876   2


Q ss_pred             HHHHHHHHhhc---------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         221 RDMFNWILSSY---------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       221 ~~~~~~~~~~~---------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+....+....                                 ....++.+.+++.+|...++..|..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  299 (320)
T 2i6l_A          231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT  299 (320)
T ss_dssp             HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred             HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence            23333333221                                 1123556778888888888877764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.97  E-value=4.5e-33  Score=235.73  Aligned_cols=184  Identities=15%  Similarity=0.098  Sum_probs=123.1

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc--CCCCeE-----Ee--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC--RMADIC-----LD--   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~--~h~~i~-----~~--   84 (260)
                      ..|++.+.||+|+||.||+|++  +|+.||||++.....     ........+.+|+.+++.+  +||||+     ++  
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-----NSRSELERLHEATFAAARLLGESPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-----THHHHHHHHHHHHHHHHHHHC----------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-----ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEee
Confidence            3488899999999999999998  488999998765432     1222345677885544444  699976     22  


Q ss_pred             -CC---------------------Cchhh------hhHHHhhccCcccccchHHHH------HHHHHHHHHHHHHhhhCC
Q psy7935          85 -DV---------------------QKSAI------QTLISNLDSQNITRENISDII------KLLSIEIGTTLSVMHSNN  130 (260)
Q Consensus        85 -~~---------------------~~~~~------~~l~~~l~~~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~  130 (260)
                       +.                     ...++      ++|.+++....  ..+.....      ..++.|++.||+|||++|
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~  214 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSKG  214 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC
Confidence             00                     00111      56666665421  12333333      567799999999999999


Q ss_pred             ceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGL  206 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~  206 (260)
                      |+||||||+|||++.++.+||+|||+++.......             ...++..+.+|+..    ..++.++|+||+|+
T Consensus       215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~  281 (371)
T 3q60_A          215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNASTATFTHALNAWQLGL  281 (371)
T ss_dssp             EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHH
T ss_pred             CccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccCCCCCcCccccHHHHHH
Confidence            99999999999999999999999999976543210             01111222233332    45789999999999


Q ss_pred             eeeeecccccccc
Q psy7935         207 SQIKVSTEDKAVD  219 (260)
Q Consensus       207 ~~~~~~~~~~~~~  219 (260)
                      +++++++|..|+.
T Consensus       282 il~elltg~~Pf~  294 (371)
T 3q60_A          282 SIYRVWCLFLPFG  294 (371)
T ss_dssp             HHHHHHHSSCSTT
T ss_pred             HHHHHHhCCCCCC
Confidence            9999999987754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=6e-32  Score=227.30  Aligned_cols=222  Identities=16%  Similarity=0.219  Sum_probs=155.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~~   89 (260)
                      +.|.+.+.||+|+||.||+|++.  |+.||||++.... .     .......+.+|+.+++.++||||+    ++.....
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   97 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-Q-----SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS   97 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-S-----SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-c-----chHHHHHHHHHHHHHHhcCCCCcccHhheEecccc
Confidence            56888999999999999999984  8999999864321 1     122346788999999999999999    2222211


Q ss_pred             h-----hhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 A-----IQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~-----~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .     .+.+++++.+...   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        98 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A           98 LRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             GGGCCCCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             cccceeEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            1     1334444432110   2348899999999999999999999999999999999999999999999999987643


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh-----
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS-----  230 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~-----  230 (260)
                      ....             ...+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+..+...     
T Consensus       178 ~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  244 (353)
T 3coi_A          178 AEMT-------------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG  244 (353)
T ss_dssp             -------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCC
T ss_pred             CCcc-------------ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            3211             01111222333322   357889999999999999999998876   22333332221     


Q ss_pred             -----------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 -----------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 -----------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                   .....++.+.+++.+|...++..|..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt  299 (353)
T 3coi_A          245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT  299 (353)
T ss_dssp             HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC
Confidence                                         01123456788888888888888864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=2.2e-32  Score=223.07  Aligned_cols=222  Identities=14%  Similarity=0.128  Sum_probs=157.3

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD----V   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~----~   86 (260)
                      .+.|++.+.||+|+||.||+|++.  ++.||+|++.......      .....+.+|+..+.++ +||||+ +++    .
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS------VDEQNALREVYAHAVLGQHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS------HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc------HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence            456888999999999999999994  8999999865432221      1245688899999998 999999 322    2


Q ss_pred             Cchhh-------hhHHHhhccCcc-cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-------------
Q psy7935          87 QKSAI-------QTLISNLDSQNI-TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-------------  145 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-------------  145 (260)
                      ...++       ++|.+++..... ...+++..++.++.|++.||+|||++||+||||||+|||++.             
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            22222       466666644211 245889999999999999999999999999999999999984             


Q ss_pred             ------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccc
Q psy7935         146 ------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDK  216 (260)
Q Consensus       146 ------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~  216 (260)
                            ...+||+|||.+..........              +...+.+|+..   ..+++++|+||+|+++++++++..
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~--------------gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~  229 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQVEE--------------GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP  229 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSCCCC--------------CCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred             ccccCCceEEEEcccccccccCCccccC--------------CCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence                  4489999999987664432110              11122333333   245579999999999999999876


Q ss_pred             cccHHHHHHHHHhhc----cccCCccHHHHHHHHHHhccccccc
Q psy7935         217 AVDFRDMFNWILSSY----RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       217 ~~~~~~~~~~~~~~~----~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ++........+..+.    +...++.+.+++.+|...++..|..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  273 (289)
T 1x8b_A          230 LPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPS  273 (289)
T ss_dssp             CCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCC
Confidence            555333344444332    2333566788888888777777754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=3.5e-32  Score=226.49  Aligned_cols=230  Identities=15%  Similarity=0.117  Sum_probs=157.7

Q ss_pred             eeccccccccCcc-eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-E
Q psy7935           9 KITEASDMVLQPA-ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-L   83 (260)
Q Consensus         9 ~i~~~~~~~~~~~-~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~   83 (260)
                      +..+...++|.+. +.||+|+||.||+|++.  ++.||+|++........      ....+.+|+.++..+. ||||+ +
T Consensus        21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~~iv~~   94 (327)
T 3lm5_A           21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD------CRAEILHEIAVLELAKSCPRVINL   94 (327)
T ss_dssp             BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE------CHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH------HHHHHHHHHHHHHhccCCCCEEEE
Confidence            3344445567666 88999999999999984  89999998654432211      2457889999999995 69998 2


Q ss_pred             ----eCCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcE
Q psy7935          84 ----DDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHL  149 (260)
Q Consensus        84 ----~~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~  149 (260)
                          .+....++       ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.   ++.+
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~  173 (327)
T 3lm5_A           95 HEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDI  173 (327)
T ss_dssp             EEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCE
T ss_pred             EEEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcE
Confidence                22222222       45555553322 346899999999999999999999999999999999999998   7899


Q ss_pred             EEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHH
Q psy7935         150 VMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMF  224 (260)
Q Consensus       150 kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~  224 (260)
                      ||+|||++..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+..
T Consensus       174 kL~Dfg~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  242 (327)
T 3lm5_A          174 KIVDFGMSRKIGHACELR-----------EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY  242 (327)
T ss_dssp             EECCGGGCEEC--------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             EEeeCccccccCCccccc-----------cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH
Confidence            999999997654332111           11122222333333  457889999999999999999988875   33333


Q ss_pred             HHHHhhcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         225 NWILSSYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       225 ~~~~~~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+.....       ...++.+.+++.+|...++..|..
T Consensus       243 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  281 (327)
T 3lm5_A          243 LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT  281 (327)
T ss_dssp             HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             HHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC
Confidence            33333211       122345677777777777777754

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=1.2e-31  Score=220.20  Aligned_cols=229  Identities=16%  Similarity=0.136  Sum_probs=163.5

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCc-hhhHHHHHHHHHHHHhhhcccC-CCCeE-EeC---
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHP-KLDEALTKERITSEIRGLMKCR-MADIC-LDD---   85 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~-~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~~---   85 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++........ ........+.+.+|+.+++++. ||||+ +++   
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   94 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence            345688999999999999999998  488999998764432111 1122233567889999999995 99999 222   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...   ..+++..++.++.|++.||+|||++|++||||||+||+++.++.+||+|||++
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  171 (298)
T 1phk_A           95 TNTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS  171 (298)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             cCCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccch
Confidence             222222       4566666442   35888999999999999999999999999999999999999999999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeecccccccc---HHHHHHH
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNW  226 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~  226 (260)
                      ..........           ...+...+.+|+..        ..++.++|+||+|++++++++|..|+.   ..+....
T Consensus       172 ~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  240 (298)
T 1phk_A          172 CQLDPGEKLR-----------EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM  240 (298)
T ss_dssp             EECCTTCCBC-----------CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             hhcCCCcccc-----------cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHH
Confidence            7654332111           01111112233322        347789999999999999999988865   3444444


Q ss_pred             HHhhccc-------cCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSYRR-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~~~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +..+...       ..++.+.+++.+|...++..|..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  277 (298)
T 1phk_A          241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT  277 (298)
T ss_dssp             HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCC
Confidence            4443321       23456788888888888888864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=5.4e-32  Score=222.99  Aligned_cols=219  Identities=16%  Similarity=0.198  Sum_probs=157.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~   87 (260)
                      .+.|.+.+.||+|+||.||+|++.  |+.||+|++.....        .....+.+|+.++++++||||+ +    .+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--------FRDSSLENEIAVLKKIKHENIVTLEDIYESTT   79 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--------cchHHHHHHHHHHHhCCCCCeeehhhhcccCC
Confidence            345788999999999999999984  89999998653221        1135688999999999999999 2    2222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE---ccCCcEEEEeeccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL---SSDHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill---~~~~~~kl~DFg~~  157 (260)
                      ..++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+||++   +.++.+||+|||++
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~  156 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS  156 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred             EEEEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence            2222       4555555432   257889999999999999999999999999999999999   67899999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (260)
                      .........            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..++.+.+..+..
T Consensus       157 ~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  224 (304)
T 2jam_A          157 KMEQNGIMS------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY  224 (304)
T ss_dssp             CCCCCBTTH------------HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC
T ss_pred             eecCCCccc------------cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            654332110            00111122333333  457889999999999999999988865   4455555555432


Q ss_pred             -------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 -------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 -------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                             ...++.+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  255 (304)
T 2jam_A          225 EFESPFWDDISESAKDFICHLLEKDPNERYT  255 (304)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC
T ss_pred             CCCccccccCCHHHHHHHHHHcCCChhHCcC
Confidence                   123456788888888888887764

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=6.3e-32  Score=224.84  Aligned_cols=220  Identities=14%  Similarity=0.181  Sum_probs=156.9

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--Ccc--EEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-Ee
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRS--VLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LD   84 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~--vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~   84 (260)
                      +....+.|++.+.||+|+||.||+|++.  +..  +++|.+....       .....+.+.+|++++.++ +||||+ ++
T Consensus        20 p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~~   92 (327)
T 1fvr_A           20 PVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLL   92 (327)
T ss_dssp             SBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEE
T ss_pred             ccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-------chHHHHHHHHHHHHHHhccCCCchhhhc
Confidence            4445567889999999999999999974  554  4888754211       111245688999999999 899999 32


Q ss_pred             C----CCchhh-------hhHHHhhccCc-------------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCc
Q psy7935          85 D----VQKSAI-------QTLISNLDSQN-------------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN  140 (260)
Q Consensus        85 ~----~~~~~~-------~~l~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~N  140 (260)
                      +    ....++       ++|.+++....             ....+++..++.++.|++.||+|||++||+||||||+|
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N  172 (327)
T 1fvr_A           93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN  172 (327)
T ss_dssp             EEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             eeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce
Confidence            2    222222       46777765432             12358899999999999999999999999999999999


Q ss_pred             EEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-ccc
Q psy7935         141 MILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDK  216 (260)
Q Consensus       141 ill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~  216 (260)
                      ||++.++.+||+|||++.........            ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..
T Consensus       173 Il~~~~~~~kL~Dfg~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  240 (327)
T 1fvr_A          173 ILVGENYVAKIADFGLSRGQEVYVKK------------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  240 (327)
T ss_dssp             EEECGGGCEEECCTTCEESSCEECCC----------------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             EEEcCCCeEEEcccCcCccccccccc------------cCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCC
Confidence            99999999999999998643221111            0111122 2233333  457889999999999999998 765


Q ss_pred             cc--------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         217 AV--------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       217 ~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                      |+                          .+.+++.+|+...+.. |+++.++++.|.++.
T Consensus       241 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          241 PYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYE-RPSFAQILVSLNRML  299 (327)
T ss_dssp             TTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhh-CcCHHHHHHHHHHHH
Confidence            53                          2557778888866665 678888888887664

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=7.8e-32  Score=232.22  Aligned_cols=182  Identities=18%  Similarity=0.217  Sum_probs=133.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc------CCCCeE-EeC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMADIC-LDD   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~------~h~~i~-~~~   85 (260)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++....         .....+.+|+.+++.+      .|+||+ +++
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~  166 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK---------RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE  166 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH---------HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc---------chHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence            356899999999999999999984  8899999864211         1134566677777666      566888 222


Q ss_pred             ----CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc--EEEEe
Q psy7935          86 ----VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH--LVMID  153 (260)
Q Consensus        86 ----~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~--~kl~D  153 (260)
                          ....++      ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.++.  +||+|
T Consensus       167 ~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~D  245 (429)
T 3kvw_A          167 NFTFRNHICMTFELLSMNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVID  245 (429)
T ss_dssp             EEEETTEEEEEECCCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECC
T ss_pred             ecccCCeEEEEEeccCCCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEee
Confidence                122122      56666665543 334888999999999999999999999999999999999999877  99999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++........             +..++..+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       246 FG~a~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~  300 (429)
T 3kvw_A          246 FGSSCYEHQRVY-------------TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP  300 (429)
T ss_dssp             CTTCEETTCCCC-------------SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccceecCCccc-------------ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence            999865432211             11112223344433  457899999999999999999987765

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=7e-32  Score=223.37  Aligned_cols=230  Identities=14%  Similarity=0.153  Sum_probs=153.8

Q ss_pred             ccccccCcc-eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC--
Q psy7935          13 ASDMVLQPA-ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD--   85 (260)
Q Consensus        13 ~~~~~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~--   85 (260)
                      ...+.|++. +.||+|+||.||+|++  +++.||||++.....   .     ....+.+|++++.++ +||||+ +++  
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~-----~~~~~~~E~~~l~~~~~h~~i~~~~~~~   80 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---H-----IRSRVFREVEMLYQCQGHRNVLELIEFF   80 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---C-----CHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---h-----hHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            344567764 7899999999999997  489999998654321   1     145688999999885 799999 322  


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc---EEEEe
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH---LVMID  153 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~---~kl~D  153 (260)
                        ....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.   +||+|
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~D  157 (316)
T 2ac3_A           81 EEEDRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICD  157 (316)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEE
Confidence              222222       4555555432   35788999999999999999999999999999999999998665   99999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeeccccccccH------
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVDF------  220 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~~------  220 (260)
                      ||++............  . ........+...+.+|+..       ..++.++|+||+|++++++++|..|+..      
T Consensus       158 fg~~~~~~~~~~~~~~--~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  234 (316)
T 2ac3_A          158 FDLGSGIKLNGDCSPI--S-TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDC  234 (316)
T ss_dssp             TTCCC----------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCS
T ss_pred             ccCccccccCCccccc--c-ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccc
Confidence            9998765432211000  0 0001111122223344433       3478899999999999999999888641      


Q ss_pred             ------------HHHHHHHHhhccc-------cCCccHHHHHHHHHHhccccccc
Q psy7935         221 ------------RDMFNWILSSYRR-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       221 ------------~~~~~~~~~~~~~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                  ..+.+.+..+...       ..++.+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  289 (316)
T 2ac3_A          235 GWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS  289 (316)
T ss_dssp             CC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             cccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC
Confidence                        2344444443221       23456778888888888888764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=221.65  Aligned_cols=223  Identities=17%  Similarity=0.217  Sum_probs=148.4

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC--
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD--   85 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~--   85 (260)
                      .....+.|++.+.||+|+||.||+|.+.  |+.||+|.+....          ..+.+.+|+.++.+++||||+ +++  
T Consensus        24 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------~~~~~~~e~~~l~~l~h~~i~~~~~~~   93 (314)
T 3com_A           24 TKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----------DLQEIIKEISIMQQCDSPHVVKYYGSY   93 (314)
T ss_dssp             ------CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----------CCHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----------HHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence            4455667899999999999999999984  8999999865422          124688999999999999999 322  


Q ss_pred             --CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 --VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 --~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                        ....++       ++|.+++...  ...+++..++.++.|++.||.|||++|++|+||||+||+++.++.+||+|||+
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  171 (314)
T 3com_A           94 FKNTDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGV  171 (314)
T ss_dssp             EETTEEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred             EeCCEEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeeccc
Confidence              222222       4566665422  23588999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY  231 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~  231 (260)
                      +...........          ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   .......+....
T Consensus       172 ~~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  241 (314)
T 3com_A          172 AGQLTDTMAKRN----------TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP  241 (314)
T ss_dssp             CEECBTTBSCBC----------CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             chhhhhhccccC----------ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC
Confidence            976543321110          01111112233322  347889999999999999999988765   111111111111


Q ss_pred             ------cccCCccHHHHHHHHHHhcccccc
Q psy7935         232 ------RRQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       232 ------~~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                            +...++.+.+++.+|...++..|.
T Consensus       242 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  271 (314)
T 3com_A          242 PPTFRKPELWSDNFTDFVKQCLVKSPEQRA  271 (314)
T ss_dssp             CCCCSSGGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred             CcccCCcccCCHHHHHHHHHHccCChhhCc
Confidence                  111234556666666666666664

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=7.3e-32  Score=218.99  Aligned_cols=223  Identities=13%  Similarity=0.071  Sum_probs=156.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  ++.||+|++......       ...+.+.+|+.+++.++||||+ +++.    ..
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-------DCPENIKKEICINKMLNHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-------THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-------hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCE
Confidence            45788999999999999999984  889999987543321       1246788999999999999999 3322    22


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++....
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  156 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence            122       3555555432   358899999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccH----HHHHHHHHhhc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDF----RDMFNWILSSY---  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~----~~~~~~~~~~~---  231 (260)
                      .......        .....+...+.+|+..   ...+.++|+||+|++++++++|..|+..    ...........   
T Consensus       157 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  228 (276)
T 2yex_A          157 YNNRERL--------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL  228 (276)
T ss_dssp             ETTEECC--------BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS
T ss_pred             CCcchhc--------ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc
Confidence            3221110        0011112223334433   2246789999999999999999888751    12222222211   


Q ss_pred             --cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        ....++.+.+++.+|...++..|..
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rps  255 (276)
T 2yex_A          229 NPWKKIDSAPLALLHKILVENPSARIT  255 (276)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CchhhcCHHHHHHHHHHCCCCchhCCC
Confidence              1223456778888888888777754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=3.2e-32  Score=232.60  Aligned_cols=177  Identities=18%  Similarity=0.242  Sum_probs=127.5

Q ss_pred             cCcc-eeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhc-ccCCCCeE-EeCCC-----
Q psy7935          18 LQPA-ECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLM-KCRMADIC-LDDVQ-----   87 (260)
Q Consensus        18 ~~~~-~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~-~~~h~~i~-~~~~~-----   87 (260)
                      |.+. +.||+|+||.||+|++.  |+.||||++..             ...+.+|++++. ..+||||+ +++..     
T Consensus        63 y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~  129 (400)
T 1nxk_A           63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENLYA  129 (400)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             ceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------------chhHHHHHHHHHHhcCCCCcceEeEEEeeccc
Confidence            4444 78999999999999984  88999998632             134667888764 45899999 33321     


Q ss_pred             -chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEee
Q psy7935          88 -KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDF  154 (260)
Q Consensus        88 -~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DF  154 (260)
                       ...+         ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+||
T Consensus       130 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          130 GRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             CCcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence             2222         46666665432 345899999999999999999999999999999999999998   789999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |+++........           .+..++..+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       209 G~a~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  264 (400)
T 1nxk_A          209 GFAKETTSHNSL-----------TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  264 (400)
T ss_dssp             TTCEECC----------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ccccccCCCCcc-----------ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence            999765432211           111222223344433  457889999999999999999987764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=5.9e-32  Score=221.04  Aligned_cols=227  Identities=16%  Similarity=0.149  Sum_probs=144.4

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++  +|+.||+|++....      ........+.++...++.++||||+ +    .+
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~   77 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV------NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR   77 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---------CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc------CcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec
Confidence            3456689999999999999999998  58999999864321      1111233445555668888999999 2    22


Q ss_pred             CCchhh------hhHHHhhccC-cccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 VQKSAI------QTLISNLDSQ-NITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 ~~~~~~------~~l~~~l~~~-~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      ....++      ++|.+++... .....+++..++.++.|++.||+|||++ ||+||||||+|||++.++.+||+|||++
T Consensus        78 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  157 (290)
T 3fme_A           78 EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS  157 (290)
T ss_dssp             SSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---
T ss_pred             cCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCc
Confidence            222222      3444443221 0034689999999999999999999998 9999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCccc------cccccccceeEeecceeeeecccccccc----HHHHHHHH
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT------LQSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWI  227 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~  227 (260)
                      ...........           ..+...+.+|+.      ...++.++|+||+|++++++++|..|+.    ....+...
T Consensus       158 ~~~~~~~~~~~-----------~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  226 (290)
T 3fme_A          158 GYLVDDVAKDI-----------DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV  226 (290)
T ss_dssp             -----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred             ccccccccccc-----------cCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence            76544321110           011111223332      1457889999999999999999988864    22222222


Q ss_pred             Hhhcc-c----cCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSYR-R----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~~-~----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..... .    ..++.+.+++.+|...++..|..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  260 (290)
T 3fme_A          227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT  260 (290)
T ss_dssp             HHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             hccCCCCcccccCCHHHHHHHHHHhhcChhhCcC
Confidence            22221 1    12345677777777777776653

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=4.3e-32  Score=223.17  Aligned_cols=226  Identities=19%  Similarity=0.213  Sum_probs=157.0

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---   84 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---   84 (260)
                      .....+.|++.+.||+|+||.||+|++.  ++.||+|++.....        ...+.+.+|+.++.+++||||+ ++   
T Consensus        14 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~   85 (302)
T 2j7t_A           14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--------EELEDYIVEIEILATCDHPYIVKLLGAY   85 (302)
T ss_dssp             SSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--------HHHHHHHHHHHHHhcCCCCCEeeeeeee
Confidence            3455677999999999999999999994  88999998643221        1246788999999999999999 22   


Q ss_pred             -CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          85 -DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        85 -~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                       +....++       ++|.+++...  ...+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+
T Consensus        86 ~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  163 (302)
T 2j7t_A           86 YHDGKLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGV  163 (302)
T ss_dssp             ECC-CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHH
T ss_pred             eeCCeEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCC
Confidence             2222222       3444444321  23588999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCccc-------cccccccceeEeecceeeeecccccccc---HHHHHHH
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGT-------LQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNW  226 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~  226 (260)
                      +..........          ....+...+.+|+.       ...++.++|+||+|++++++++|..|+.   ..+....
T Consensus       164 ~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  233 (302)
T 2j7t_A          164 SAKNLKTLQKR----------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK  233 (302)
T ss_dssp             HHHHHHHHHC---------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             Ccccccccccc----------ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence            75432211100          00111111223332       2347789999999999999999988866   3333444


Q ss_pred             HHhhcc------ccCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSYR------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~~------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ......      ...+..+.+++.+|...++..|..
T Consensus       234 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  269 (302)
T 2j7t_A          234 IAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS  269 (302)
T ss_dssp             HHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred             HhccCCcccCCccccCHHHHHHHHHHcccChhhCCC
Confidence            333321      222445678888888888777754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=4.8e-32  Score=230.94  Aligned_cols=188  Identities=19%  Similarity=0.152  Sum_probs=137.5

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC--------C
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR--------M   78 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--------h   78 (260)
                      .+.....+.|++.+.||+|+||.||+|++.  ++.||||++...         ....+.+.+|+.+++.++        |
T Consensus        30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~~  100 (397)
T 1wak_A           30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---------EHYTETALDEIRLLKSVRNSDPNDPNR  100 (397)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHSCTTCGGG
T ss_pred             ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---------CcchHHHHHHHHHHHHHhhcCCCCCCc
Confidence            344445677999999999999999999984  889999986421         112456889999999886        6


Q ss_pred             CCeE-EeCC------Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEE
Q psy7935          79 ADIC-LDDV------QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMI  142 (260)
Q Consensus        79 ~~i~-~~~~------~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nil  142 (260)
                      +||+ +++.      ....+        +.+.+++.... ...+++..++.++.|++.||+|||++ ||+||||||+|||
T Consensus       101 ~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIl  179 (397)
T 1wak_A          101 EMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENIL  179 (397)
T ss_dssp             GGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEE
T ss_pred             ceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHee
Confidence            7787 3322      22222        34444443322 24588999999999999999999998 9999999999999


Q ss_pred             EccCC-------------------------------------------------cEEEEeeccccccccccccccccccc
Q psy7935         143 LSSDH-------------------------------------------------HLVMIDFGLSQIKVSTEDKAVDLYVL  173 (260)
Q Consensus       143 l~~~~-------------------------------------------------~~kl~DFg~~~~~~~~~~~~~d~~~~  173 (260)
                      ++.++                                                 .+||+|||++.........       
T Consensus       180 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~-------  252 (397)
T 1wak_A          180 LSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTE-------  252 (397)
T ss_dssp             ECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCS-------
T ss_pred             EeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCcc-------
Confidence            99765                                                 8999999999765432111       


Q ss_pred             ccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         174 KRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                            ..++..+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       253 ------~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~  294 (397)
T 1wak_A          253 ------DIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFE  294 (397)
T ss_dssp             ------CCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ------CCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence                  0112222333333  447889999999999999999988874

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=7.4e-32  Score=224.08  Aligned_cols=224  Identities=20%  Similarity=0.240  Sum_probs=154.3

Q ss_pred             ccccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-EeCC-
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-LDDV-   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~~~~-   86 (260)
                      .+.|++.+.||+|+||.||+|++.   |+.||+|++.........      ...+.+|+.+++.+   +||||+ +++. 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~~i~~~~~~~   83 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDVC   83 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccC------CchhhHHHHHHHhhhccCCCCeEeeeeee
Confidence            456889999999999999999982   788999987544322111      12355677666655   899999 3322 


Q ss_pred             ------Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          87 ------QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        87 ------~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                            .....        ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           84 TVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             EEEECSSEEEEEEEEECCSCBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             eecccCCCceEEEEEecCCCCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEe
Confidence                  11112        56666665433 3348899999999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWI  227 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~  227 (260)
                      |||++..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.   ..+....+
T Consensus       163 Dfg~~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i  231 (326)
T 1blx_A          163 DFGLARIYSFQMALT-----------SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI  231 (326)
T ss_dssp             SCCSCCCCCGGGGGC-----------CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cCcccccccCCCCcc-----------ccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999997654322110           11111122233332  457889999999999999999988875   23333333


Q ss_pred             Hhhc------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSSY------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~~------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ....                              ....++.+.+++.+|...++..|..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  290 (326)
T 1blx_A          232 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS  290 (326)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC
Confidence            3211                              1122344567778887777777754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=4.1e-32  Score=227.70  Aligned_cols=231  Identities=16%  Similarity=0.132  Sum_probs=162.3

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchh---------hHHHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKL---------DEALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~---------~~~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      ...+.|++.+.||+|+||.||+|+++|+.||+|++..........         ........+.+|+.++.+++||||+ 
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            334679999999999999999999999999999865432211100         0000126789999999999999999 


Q ss_pred             ----EeCCCchhh-------hhHHHh------hccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEc
Q psy7935          83 ----LDDVQKSAI-------QTLISN------LDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILS  144 (260)
Q Consensus        83 ----~~~~~~~~~-------~~l~~~------l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~  144 (260)
                          +.+....++       ++|.++      +.... ...+++..++.++.|++.||+|||+ +||+||||||+||+++
T Consensus       108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD  186 (348)
T ss_dssp             CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC
T ss_pred             EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc
Confidence                333232222       355554      32211 3458899999999999999999999 9999999999999999


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCccccc---cccc-cceeEeecceeeeeccccccccH
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ---SYNH-HLVMIDFGLSQIKVSTEDKAVDF  220 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~di~s~g~~~~~~~~~~~~~~~  220 (260)
                      .++.+||+|||++.........            ...+...+.+|+...   .++. ++|+||+|++++++++|..|+..
T Consensus       187 ~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  254 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDKKIK------------GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL  254 (348)
T ss_dssp             TTSCEEECCCTTCEECBTTEEC------------SSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CCCcEEEecccccccccccccc------------CCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999765432110            111112233344332   3344 89999999999999999888762


Q ss_pred             ----HHHHHHHHhhcc----------------------ccCCccHHHHHHHHHHhccccccc
Q psy7935         221 ----RDMFNWILSSYR----------------------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       221 ----~~~~~~~~~~~~----------------------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          .+..+.+..+..                      ...++.+.+++.+|...++..|..
T Consensus       255 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps  316 (348)
T 2pml_X          255 KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERIT  316 (348)
T ss_dssp             SSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             CCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCC
Confidence                555555554322                      223456778888888888887764

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=1.3e-31  Score=241.58  Aligned_cols=217  Identities=15%  Similarity=0.196  Sum_probs=153.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E---eC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L---DD   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~---~~   85 (260)
                      .+.|++.+.||+|+||.||+|++.     +..||+|.....  .     .....+.+.+|+.++++++||||+ +   +.
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~  461 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--T-----SDSVREKFLQEALTMRQFDHPHIVKLIGVIT  461 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--T-----CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--C-----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            455788999999999999999983     346888874321  1     112356799999999999999999 2   22


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ....++       ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus       462 ~~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          462 ENPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             cCceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence            222222       5566665433  2347888999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---------------  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---------------  219 (260)
                      ..........          ....+.+ +.+|+..  ..++.++|+||+|++++++++ |..|+.               
T Consensus       540 ~~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~  609 (656)
T 2j0j_A          540 YMEDSTYYKA----------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE  609 (656)
T ss_dssp             SCCC--------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC
T ss_pred             ecCCCcceec----------cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence            6643321110          0111122 2333333  457889999999999999987 655532               


Q ss_pred             -----------HHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         220 -----------FRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       220 -----------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                 +.+++.+|+...+.. |+++.++++.|..+..
T Consensus       610 ~~~~~~~~~~~l~~li~~~l~~dP~~-RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          610 RLPMPPNCPPTLYSLMTKCWAYDPSR-RPRFTELKAQLSTILE  651 (656)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHHHH
Confidence                       456667777755554 5677777777766543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=2.2e-32  Score=227.03  Aligned_cols=192  Identities=13%  Similarity=0.149  Sum_probs=137.7

Q ss_pred             ccccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC--CCCeE----
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR--MADIC----   82 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~----   82 (260)
                      .....+.|++.+.||+|+||.||+|++  +++.||||++..........  ......+.+|+.++++++  |+|++    
T Consensus        38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~i~~~~~  115 (320)
T 3a99_A           38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE--LPNGTRVPMEVVLLKKVSSGFSGVIRLLD  115 (320)
T ss_dssp             --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE--CTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred             cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh--hhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence            344566799999999999999999998  48899999876544322100  001234667889999886  59998    


Q ss_pred             -EeCCCchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc-cCCcEEEE
Q psy7935          83 -LDDVQKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS-SDHHLVMI  152 (260)
Q Consensus        83 -~~~~~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~-~~~~~kl~  152 (260)
                       +.+....++        ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+
T Consensus       116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~  192 (320)
T 3a99_A          116 WFERPDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI  192 (320)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             EEecCCcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence             222222221        5667766543   2588899999999999999999999999999999999999 68999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||++.........            ...+...+.+|+..   ...+.++|+||+|++++++++|..|+.
T Consensus       193 Dfg~~~~~~~~~~~------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  250 (320)
T 3a99_A          193 DFGSGALLKDTVYT------------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE  250 (320)
T ss_dssp             CCTTCEECCSSCBC------------CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eCcccccccccccc------------CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCC
Confidence            99998765432111            01111122233322   234678999999999999999988865

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=1e-31  Score=223.65  Aligned_cols=226  Identities=12%  Similarity=0.082  Sum_probs=155.6

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEE-------cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEY-------LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      ++.+...+.|++.+.||+|+||.||+|++       .+..||||.+....       .......+.+|+.++++++||||
T Consensus        23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i   95 (327)
T 2yfx_A           23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-------SEQDELDFLMEALIISKFNHQNI   95 (327)
T ss_dssp             GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-------CHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-------chhhHHHHHHHHHHHhhCCCCCC
Confidence            45566778899999999999999999983       36789999853211       11124578899999999999999


Q ss_pred             E-Ee----CCCchhh-------hhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          82 C-LD----DVQKSAI-------QTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        82 ~-~~----~~~~~~~-------~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      + ++    +....++       ++|.+++.....    ...+++..++.++.|++.||.|||++||+||||||+|||++.
T Consensus        96 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~  175 (327)
T 2yfx_A           96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTC  175 (327)
T ss_dssp             CCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred             CeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEec
Confidence            9 22    2222222       567777654321    134888899999999999999999999999999999999994


Q ss_pred             ---CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         146 ---DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       146 ---~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                         +..+||+|||++.............    .    ..+...+.+|+..  ..++.++|+||+|++++++++ |..|+.
T Consensus       176 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~----~----~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~  247 (327)
T 2yfx_A          176 PGPGRVAKIGDFGMARDIYRASYYRKGG----C----AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP  247 (327)
T ss_dssp             SSTTCCEEECCCHHHHHHHC------CC----G----GGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             CCCcceEEECccccccccccccccccCC----C----cCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence               5579999999987543322111000    0    0011112233322  457889999999999999998 655432


Q ss_pred             --------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 --------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 --------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                                +.+++.+|+...+.. |+++.++++.+..+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~-Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          248 SKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPED-RPNFAIILERIEYCT  303 (327)
T ss_dssp             TCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhh-CcCHHHHHHHHHHHh
Confidence                                      446677777755554 567777777776554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=4.9e-32  Score=232.41  Aligned_cols=184  Identities=12%  Similarity=0.067  Sum_probs=127.7

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-CCeE-----------
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-ADIC-----------   82 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~-----------   82 (260)
                      .+...+.||+|+||.||+|++.  |+.||||++.......     ....+.+.+|+.+++.+.| +|..           
T Consensus        79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~-----~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~  153 (413)
T 3dzo_A           79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPP-----SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFP  153 (413)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC---------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCC
T ss_pred             eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCcc-----HHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccc
Confidence            3667889999999999999985  9999999865322111     1123568899999999877 2111           


Q ss_pred             -----------EeC---CCc------hh------hhhHHHhhc---c-CcccccchHHHHHHHHHHHHHHHHHhhhCCce
Q psy7935          83 -----------LDD---VQK------SA------IQTLISNLD---S-QNITRENISDIIKLLSIEIGTTLSVMHSNNII  132 (260)
Q Consensus        83 -----------~~~---~~~------~~------~~~l~~~l~---~-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~  132 (260)
                                 +..   ...      .+      -++|.++++   . ......+++..+..++.|++.||+|||++||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii  233 (413)
T 3dzo_A          154 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  233 (413)
T ss_dssp             CEEEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhhcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                       000   000      00      034444442   1 11144588889999999999999999999999


Q ss_pred             ecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc------------ccccccce
Q psy7935         133 HGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL------------QSYNHHLV  200 (260)
Q Consensus       133 H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~d  200 (260)
                      ||||||+|||++.++.+||+|||+++......             .+..+ ..+.+|+..            ..++.++|
T Consensus       234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D  299 (413)
T 3dzo_A          234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA-------------VSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD  299 (413)
T ss_dssp             CSCCCGGGEEECTTCCEEECCGGGCEETTEEE-------------CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred             cCCcccceEEEecCCeEEEEeccceeecCCcc-------------ccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence            99999999999999999999999987643321             11112 222233322            34678999


Q ss_pred             eEeecceeeeecccccccc
Q psy7935         201 MIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       201 i~s~g~~~~~~~~~~~~~~  219 (260)
                      +||+|++++++++|+.|+.
T Consensus       300 vwSlGvil~elltg~~Pf~  318 (413)
T 3dzo_A          300 TWTLGLAIYWIWCADLPNT  318 (413)
T ss_dssp             HHHHHHHHHHHHHSSCCCC
T ss_pred             HHHHHHHHHHHHHCCCCCC
Confidence            9999999999999987754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=3e-31  Score=220.53  Aligned_cols=222  Identities=18%  Similarity=0.250  Sum_probs=148.9

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC---
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV---   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~---   86 (260)
                      ..+.|++.+.||+|+||.||+|++  +|+.||||++.....         ....+.+|+.++.++ +||||+ +++.   
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---------EEEEIKQEINMLKKYSHHRNIATYYGAFIK   92 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---------cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence            445689999999999999999999  589999998653321         135688899999998 799999 2221   


Q ss_pred             -------Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          87 -------QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        87 -------~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                             ...++       ++|.+++.... ...+++..++.++.|++.||+|||++||+|+||||+|||++.++.+||+
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~  171 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV  171 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe
Confidence                   11111       46666665432 3458889999999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc---HHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRD  222 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~  222 (260)
                      |||++...........          ...+...+.+|+..       ..++.++|+||+|++++++++|..|+.   ...
T Consensus       172 Dfg~~~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  241 (326)
T 2x7f_A          172 DFGVSAQLDRTVGRRN----------TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR  241 (326)
T ss_dssp             CCTTTC-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             eCcCceecCcCccccc----------cccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH
Confidence            9999876543221100          01111112223222       357889999999999999999988764   112


Q ss_pred             HHHHHHhhcc-----ccCCccHHHHHHHHHHhcccccc
Q psy7935         223 MFNWILSSYR-----RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       223 ~~~~~~~~~~-----~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ....+.....     ...++.+.+++.+|...++..|.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  279 (326)
T 2x7f_A          242 ALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP  279 (326)
T ss_dssp             HHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCC
Confidence            2222221111     11234556666666666666654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=1.7e-31  Score=218.28  Aligned_cols=222  Identities=18%  Similarity=0.188  Sum_probs=158.1

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee----CCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD----DVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~----~~~   87 (260)
                      .+.|++.+.||+|+||.||+|++  +++.||+|++........      ....+.+|+.++++++||||+ ++    +..
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   94 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK------DTSTILREVELLKKLDHPNIMKLFEILEDSS   94 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSS------CHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchH------HHHHHHHHHHHHHhccCCCccEEEEEEeCCC
Confidence            45688999999999999999998  488999998754432211      245788999999999999999 22    222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeeccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLS  157 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~  157 (260)
                      ..++       ++|.+++...   ..+++..++.++.|++.||+|||++|++||||||+||+++.   ++.+||+|||++
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           95 SFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             eEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            2222       3454544332   25789999999999999999999999999999999999976   447999999998


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-  232 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-  232 (260)
                      ............           .+...+.+|+.. +.++.++|+||+|++++++++|..|+.   ..+....+..+.. 
T Consensus       172 ~~~~~~~~~~~~-----------~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  240 (287)
T 2wei_A          172 TCFQQNTKMKDR-----------IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA  240 (287)
T ss_dssp             GTBCCCSSCSCH-----------HHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             eeecCCCccccc-----------cCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Confidence            765433211100           011112222222 447889999999999999999988865   4445555544322 


Q ss_pred             ------ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ...++.+.+++.+|...++..|..
T Consensus       241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  270 (287)
T 2wei_A          241 FDLPQWRTISDDAKDLIRKMLTFHPSLRIT  270 (287)
T ss_dssp             CCSGGGTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCchhhhhcCHHHHHHHHHHcccChhhCcC
Confidence                  122456778888888888887764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=2.3e-31  Score=220.13  Aligned_cols=226  Identities=15%  Similarity=0.131  Sum_probs=153.6

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC--CCCeE-Ee----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR--MADIC-LD----   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~-~~----   84 (260)
                      ...+.|++.+.||+|+||.||+|.+. ++.||||++......      ......+.+|+.++.+++  |+||+ ++    
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~   98 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD------NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI   98 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC------HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc------ccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence            34456899999999999999999984 888999987544321      122467899999999997  48998 22    


Q ss_pred             CCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          85 DVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        85 ~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      +....++      ++|.+++....   .+++..+..++.|++.||.|||++||+||||||+|||++ ++.+||+|||++.
T Consensus        99 ~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~  174 (313)
T 3cek_A           99 TDQYIYMVMECGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIAN  174 (313)
T ss_dssp             CSSEEEEEECCCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSC
T ss_pred             cCCEEEEEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccc
Confidence            2222122      56777776542   578889999999999999999999999999999999997 5899999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-------------ccccccceeEeecceeeeecccccccc----HH
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------------QSYNHHLVMIDFGLSQIKVSTEDKAVD----FR  221 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~di~s~g~~~~~~~~~~~~~~----~~  221 (260)
                      ...........        ....+...+.+|+..             ..++.++|+||+|++++++++|..|+.    ..
T Consensus       175 ~~~~~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~  246 (313)
T 3cek_A          175 QMQPDTTSVVK--------DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI  246 (313)
T ss_dssp             C----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred             cccCccccccc--------cCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence            65433211000        001111112222222             357889999999999999999988865    12


Q ss_pred             HHHHHHHhhc-----cccCCccHHHHHHHHHHhccccccc
Q psy7935         222 DMFNWILSSY-----RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       222 ~~~~~~~~~~-----~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..+.......     +...++.+.+++.+|...++..|..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  286 (313)
T 3cek_A          247 SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS  286 (313)
T ss_dssp             HHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC
Confidence            2222222211     1222345677777777777777753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.1e-31  Score=240.70  Aligned_cols=215  Identities=15%  Similarity=0.153  Sum_probs=160.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--   86 (260)
                      ...+.|++.+.||+|+||.||+|.+.   |+.||||++....       .......+.+|+.++.+++||||+ +++.  
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  149 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-------DAEAQAMAMAERQFLAEVVHPSIVQIFNFVE  149 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEE
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-------CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEe
Confidence            33467999999999999999999983   7899999754321       112245788999999999999999 3322  


Q ss_pred             -Cch----hhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          87 -QKS----AIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        87 -~~~----~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ...    ..+.+++|+.+..+    ...+++..++.++.|++.||.|||++||+||||||+|||++.+ .+||+|||++
T Consensus       150 ~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a  228 (681)
T 2pzi_A          150 HTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAV  228 (681)
T ss_dssp             EECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred             ecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccc
Confidence             111    13557888776544    2358899999999999999999999999999999999999975 9999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccccccc------------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAV------------------  218 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~------------------  218 (260)
                      +......              ...++..+.+|+.. ...+.++|+||+|+++++++++..|+                  
T Consensus       229 ~~~~~~~--------------~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~  294 (681)
T 2pzi_A          229 SRINSFG--------------YLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTY  294 (681)
T ss_dssp             EETTCCS--------------CCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHC
T ss_pred             hhcccCC--------------ccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccccccccccccC
Confidence            7654321              01111122333333 33578999999999999998876542                  


Q ss_pred             -cHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         219 -DFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       219 -~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                       .+.+++.+|+...+..++.+.+++...+..+
T Consensus       295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence             2567889999988888777877777776543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=8.9e-32  Score=221.24  Aligned_cols=195  Identities=16%  Similarity=0.237  Sum_probs=124.6

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++  +++.||||++.....       ......+.+|+.++++++||||+ +    ..
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   84 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-------QTSMDELLKEIQAMSQCHHPNIVSYYTSFVV   84 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEES
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-------chhHHHHHHHHHHHhhcCCCCEeeEEEEEee
Confidence            3456689999999999999999987  588999997543221       11245688999999999999999 2    22


Q ss_pred             CCchhh-------hhHHHhhccC-----cccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEe
Q psy7935          86 VQKSAI-------QTLISNLDSQ-----NITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      ....++       ++|.+++...     .....+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~d  164 (303)
T 2vwi_A           85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIAD  164 (303)
T ss_dssp             SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECC
T ss_pred             cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEe
Confidence            222222       4555555421     0123488999999999999999999999999999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ||++............     .......+...+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       165 fg~~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  228 (303)
T 2vwi_A          165 FGVSAFLATGGDITRN-----KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH  228 (303)
T ss_dssp             CHHHHHCC--------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             ccchheeccCCCccch-----hhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence            9998765433211100     000111122223344433   347889999999999999999987765

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.97  E-value=3.1e-31  Score=217.78  Aligned_cols=230  Identities=21%  Similarity=0.188  Sum_probs=150.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC------
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV------   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~------   86 (260)
                      +.|++.+.||+|+||.||+|++  +++.||||.+...         ......+.+|+.++++++||||+ +++.      
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   76 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---------EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRN   76 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---------HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence            4578899999999999999998  4899999986321         11246788999999999999998 3321      


Q ss_pred             ---------Cchhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc
Q psy7935          87 ---------QKSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH  148 (260)
Q Consensus        87 ---------~~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~  148 (260)
                               .....         ++|.+++...  ...+++..++.++.|++.||+|||++||+||||||+|||++.++.
T Consensus        77 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~  154 (303)
T 1zy4_A           77 FVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRN  154 (303)
T ss_dssp             CCC------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSC
T ss_pred             hhhhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCC
Confidence                     01111         4666666533  235677888899999999999999999999999999999999999


Q ss_pred             EEEEeecccccccccccccc----cccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc-H
Q psy7935         149 LVMIDFGLSQIKVSTEDKAV----DLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD-F  220 (260)
Q Consensus       149 ~kl~DFg~~~~~~~~~~~~~----d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~-~  220 (260)
                      +||+|||++...........    .............+...+.+|+..   ..++.++|+||+|+++++++++..+.. .
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~  234 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMER  234 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhH
Confidence            99999999976543321100    000000111112222233344433   357889999999999999998422111 2


Q ss_pred             HHHHHHHHhhcc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         221 RDMFNWILSSYR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       221 ~~~~~~~~~~~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+....+.....       ...++.+.+++.+|...++..|..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  277 (303)
T 1zy4_A          235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG  277 (303)
T ss_dssp             HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC
Confidence            233333332111       111233577777777777777753

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=2.8e-31  Score=223.61  Aligned_cols=221  Identities=15%  Similarity=0.189  Sum_probs=143.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C-
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q-   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~-   87 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++......         .....+++..+..++||||+ +++.    . 
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---------RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTC---------CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc---------cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            46889999999999999999984  889999986432211         12456777888889999999 3221    1 


Q ss_pred             ----chhhhhHHHhhccCc---------ccccchHHHHHHHHHHHHHHHHHhh--hCCceecCCCCCcEEEcc-CCcEEE
Q psy7935          88 ----KSAIQTLISNLDSQN---------ITRENISDIIKLLSIEIGTTLSVMH--SNNIIHGDLTTSNMILSS-DHHLVM  151 (260)
Q Consensus        88 ----~~~~~~l~~~l~~~~---------~~~~~~~~~~~~i~~~i~~~l~~LH--~~~i~H~dlkp~Nill~~-~~~~kl  151 (260)
                          ...++.+++|+.+..         ....+++..+..++.|++.||.|||  ++||+||||||+|||++. ++.+||
T Consensus        94 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             SCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             ccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence                111223444433220         1345788889999999999999999  999999999999999997 899999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHH
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFN  225 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~  225 (260)
                      +|||++...........           ..+...+.+|+..   ..++.++|+||+|++++++++|..|+.   ..+.+.
T Consensus       174 ~Dfg~a~~~~~~~~~~~-----------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  242 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPNVA-----------YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH  242 (360)
T ss_dssp             CCCTTCBCCCTTSCCCS-----------TTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             eeCCCceecCCCCCccc-----------ccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH
Confidence            99999976654322110           0111223333333   347899999999999999999998876   333333


Q ss_pred             HHHhhc-----------------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         226 WILSSY-----------------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       226 ~~~~~~-----------------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+....                                   ....++.+.+++.+|...++..|..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  308 (360)
T 3e3p_A          243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK  308 (360)
T ss_dssp             HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCC
Confidence            333211                                   0012345678888888888888864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.5e-32  Score=224.19  Aligned_cols=190  Identities=13%  Similarity=0.088  Sum_probs=132.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc----CCCCeE-EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC----RMADIC-LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~----~h~~i~-~~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++  +++.||||++........  ........+.+|+.++.++    +|+||+ +++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW--SPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc--ccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            3456699999999999999999998  488999998654332111  0011123466788888888    899999 332


Q ss_pred             C----Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc-cCCcEEEE
Q psy7935          86 V----QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS-SDHHLVMI  152 (260)
Q Consensus        86 ~----~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~-~~~~~kl~  152 (260)
                      .    ...++        ++|.+++...   ..+++..++.++.|++.||+|||++||+||||||+||+++ .++.+||+
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEE
Confidence            2    11111        5666666543   2588999999999999999999999999999999999999 78999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||++.........            ...+...+.+|+..   ...+.++|+||+|++++++++|..|+.
T Consensus       183 dfg~~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  240 (312)
T 2iwi_A          183 DFGSGALLHDEPYT------------DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE  240 (312)
T ss_dssp             CCSSCEECCSSCBC------------CCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             EcchhhhcccCccc------------ccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCC
Confidence            99998765432211            01111122233322   223458999999999999999988765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=3.6e-31  Score=222.20  Aligned_cols=188  Identities=15%  Similarity=0.187  Sum_probs=136.0

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--C-ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCC-----
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--G-RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD-----   80 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~-----   80 (260)
                      .+.....+.|++.+.||+|+||.||+|.+.  + ..||+|++...         ......+.+|+.++++++|++     
T Consensus        12 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A           12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---------GKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             ccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---------ccchhHHHHHHHHHHHHhhcCCCCce
Confidence            344445678999999999999999999984  4 68999985321         112456788999999887765     


Q ss_pred             -eE-EeC----CCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEE-----
Q psy7935          81 -IC-LDD----VQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL-----  143 (260)
Q Consensus        81 -i~-~~~----~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill-----  143 (260)
                       ++ +.+    ....++      +.+.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||+     
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~  161 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF  161 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccc
Confidence             44 211    122222      44555554332 2358899999999999999999999999999999999999     


Q ss_pred             --------------ccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecce
Q psy7935         144 --------------SSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLS  207 (260)
Q Consensus       144 --------------~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~  207 (260)
                                    +.++.+||+|||++.........             ..+...+.+|+..  ..++.++|+||+|++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~~Di~slG~i  228 (355)
T 2eu9_A          162 ETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTT-------------IVATRHYRPPEVILELGWAQPCDVWSIGCI  228 (355)
T ss_dssp             EEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCS-------------SCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred             cccccccccccccccCCCcEEEeecCccccccccccC-------------CcCCCcccCCeeeecCCCCCccchHHHHHH
Confidence                          56789999999999764332111             1111122233332  457889999999999


Q ss_pred             eeeecccccccc
Q psy7935         208 QIKVSTEDKAVD  219 (260)
Q Consensus       208 ~~~~~~~~~~~~  219 (260)
                      ++++++|..|+.
T Consensus       229 l~el~~g~~pf~  240 (355)
T 2eu9_A          229 LFEYYRGFTLFQ  240 (355)
T ss_dssp             HHHHHHSSCSCC
T ss_pred             HHHHHhCCCCCC
Confidence            999999988876

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=2.9e-31  Score=228.97  Aligned_cols=194  Identities=18%  Similarity=0.181  Sum_probs=129.2

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~   85 (260)
                      ++.....+++...+.||+|+||.||.+.. +|+.||||++....           ...+.+|+.++.++ +||||+ +++
T Consensus         8 ~~~~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----------~~~~~~E~~~l~~l~~HpnIv~~~~   76 (434)
T 2rio_A            8 NFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----------CDIALMEIKLLTESDDHPNVIRYYC   76 (434)
T ss_dssp             CCSCSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----------HHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred             chhhhhhheeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----------HHHHHHHHHHHHhccCCCCcCeEEE
Confidence            44556667777789999999999976543 69999999864321           24577899999876 899999 322


Q ss_pred             ----CCchhh------hhHHHhhccCcccc----cchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-----
Q psy7935          86 ----VQKSAI------QTLISNLDSQNITR----ENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-----  146 (260)
Q Consensus        86 ----~~~~~~------~~l~~~l~~~~~~~----~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-----  146 (260)
                          ....++      ++|.+++.......    ..++..++.++.|++.||+|||++||+||||||+|||++.+     
T Consensus        77 ~~~~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~  156 (434)
T 2rio_A           77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTA  156 (434)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHS
T ss_pred             EEecCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCccccc
Confidence                121122      66777765543211    11333456799999999999999999999999999999754     


Q ss_pred             --------CcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc---------ccccccceeEeecceee
Q psy7935         147 --------HHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---------QSYNHHLVMIDFGLSQI  209 (260)
Q Consensus       147 --------~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~di~s~g~~~~  209 (260)
                              +.+||+|||+++...........      ......++..+.+|+..         ..++.++|+||+|++++
T Consensus       157 ~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~  230 (434)
T 2rio_A          157 DQQTGAENLRILISDFGLCKKLDSGQSSFRT------NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY  230 (434)
T ss_dssp             CCTTCCCSCEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred             ccccCCCceEEEEcccccceecCCCCcccee------eecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence                    48999999999876543211000      00111122222233322         45788999999999999


Q ss_pred             eecc-cccccc
Q psy7935         210 KVST-EDKAVD  219 (260)
Q Consensus       210 ~~~~-~~~~~~  219 (260)
                      ++++ |..|+.
T Consensus       231 ellt~g~~Pf~  241 (434)
T 2rio_A          231 YILSKGKHPFG  241 (434)
T ss_dssp             HHHTTSCCTTC
T ss_pred             HHHhCCCCCCC
Confidence            9998 776654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=4e-31  Score=216.61  Aligned_cols=220  Identities=15%  Similarity=0.141  Sum_probs=150.3

Q ss_pred             CcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCchhh
Q psy7935          19 QPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKSAI   91 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~~~   91 (260)
                      .....||+|+||.||+|++  ++..||+|.+.....        ...+.+.+|+.+++.++||||+ +++    ....++
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   96 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS--------RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKI   96 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-----------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch--------HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEE
Confidence            3345899999999999998  478999998654321        1245688999999999999999 222    222222


Q ss_pred             -------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeeccccccccc
Q psy7935          92 -------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        92 -------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~~~~~~~~  163 (260)
                             ++|.+++.........++..+..++.|++.||+|||++|++|+||||+||+++. ++.+||+|||++......
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~  176 (295)
T 2clq_A           97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI  176 (295)
T ss_dssp             EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred             EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence                   566666654321234668888889999999999999999999999999999998 899999999998765432


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc----HH-HHHHHHHhh----
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD----FR-DMFNWILSS----  230 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~----~~-~~~~~~~~~----  230 (260)
                      .....          ...+...+.+|+..    ..++.++|+||+|++++++++|..|+.    .. .........    
T Consensus       177 ~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  246 (295)
T 2clq_A          177 NPCTE----------TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE  246 (295)
T ss_dssp             ----C----------CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCC
T ss_pred             CCccc----------ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccc
Confidence            21110          01111122333333    236789999999999999999988864    11 111111111    


Q ss_pred             ccccCCccHHHHHHHHHHhccccccc
Q psy7935         231 YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+...++.+.+++.+|...++..|..
T Consensus       247 ~~~~~~~~~~~li~~~l~~dp~~Rps  272 (295)
T 2clq_A          247 IPESMSAEAKAFILKCFEPDPDKRAC  272 (295)
T ss_dssp             CCTTSCHHHHHHHHHTTCSSTTTSCC
T ss_pred             ccccCCHHHHHHHHHHccCChhhCCC
Confidence            12233556677888887777777754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=7.2e-31  Score=218.90  Aligned_cols=187  Identities=16%  Similarity=0.187  Sum_probs=136.6

Q ss_pred             eccccccccCcceeeccCCceeEEEEEE---cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCC------
Q psy7935          10 ITEASDMVLQPAECFKQGAEGRIFKTEY---LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD------   80 (260)
Q Consensus        10 i~~~~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~------   80 (260)
                      ......+.|++.+.||+|+||.||+|.+   .++.||||++...         ....+.+.+|+.+++.++|++      
T Consensus         8 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~~~~~   78 (339)
T 1z57_A            8 SGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---------DRYCEAARSEIQVLEHLNTTDPNSTFR   78 (339)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---------HHHHHHHHHHHHHHHHHHHHCTTCTTC
T ss_pred             cCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---------CchhHHHHHHHHHHHHhhhcCCCCcee
Confidence            3444567899999999999999999998   3789999985321         112456888999998887765      


Q ss_pred             eE-E----eCCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc----
Q psy7935          81 IC-L----DDVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS----  145 (260)
Q Consensus        81 i~-~----~~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~----  145 (260)
                      ++ +    .+....++      ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.    
T Consensus        79 i~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  157 (339)
T 1z57_A           79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYT  157 (339)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEE
T ss_pred             eEeeecccccCCcEEEEEcCCCCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccc
Confidence            55 2    22222222      56666665443 235788999999999999999999999999999999999987    


Q ss_pred             ---------------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeeccee
Q psy7935         146 ---------------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQ  208 (260)
Q Consensus       146 ---------------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~  208 (260)
                                     ++.+||+|||++.........             ..+...+.+|+..  ..++.++|+||+|+++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  224 (339)
T 1z57_A          158 EAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST-------------LVSTRHYRAPEVILALGWSQPCDVWSIGCIL  224 (339)
T ss_dssp             EEEC----CEEEEESCCCEEECCCSSCEETTSCCCS-------------SCSCGGGCCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred             cccCCccccccccccCCCceEeeCcccccCcccccc-------------ccCCccccChHHhhCCCCCcchhhHHHHHHH
Confidence                           668999999998764332111             1111122233332  3578899999999999


Q ss_pred             eeecccccccc
Q psy7935         209 IKVSTEDKAVD  219 (260)
Q Consensus       209 ~~~~~~~~~~~  219 (260)
                      +++++|..|+.
T Consensus       225 ~el~~g~~pf~  235 (339)
T 1z57_A          225 IEYYLGFTVFP  235 (339)
T ss_dssp             HHHHHSSCSCC
T ss_pred             HHHHhCCCCCC
Confidence            99999988775

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=1.4e-30  Score=214.21  Aligned_cols=158  Identities=16%  Similarity=0.250  Sum_probs=119.0

Q ss_pred             ccCcc-eeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhh-cccCCCCeE-EeCCC----
Q psy7935          17 VLQPA-ECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGL-MKCRMADIC-LDDVQ----   87 (260)
Q Consensus        17 ~~~~~-~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l-~~~~h~~i~-~~~~~----   87 (260)
                      .|.+. +.||+|+||.||+|.+  +++.||+|++..             ...+.+|++++ +..+||||+ +++..    
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~   84 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENLY   84 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------------cHHHHHHHHHHHHhccCCCchhHHhhhhhhc
Confidence            35555 7899999999999998  488999998632             13466788877 556899999 32221    


Q ss_pred             --chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEe
Q psy7935          88 --KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMID  153 (260)
Q Consensus        88 --~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~D  153 (260)
                        ...+         ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.   ++.+||+|
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           85 AGRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             TTEEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             CCCceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence              2222         46666665432 345899999999999999999999999999999999999998   78999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccc
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ||++.....                              ..++.++|+||+|++++++++|..|+
T Consensus       164 fg~a~~~~~------------------------------~~~~~~~DiwslG~il~el~tg~~pf  198 (299)
T 3m2w_A          164 FGFAKETTG------------------------------EKYDKSCDMWSLGVIMYILLCGYPPF  198 (299)
T ss_dssp             CTTCEECTT------------------------------CGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred             ccccccccc------------------------------ccCCchhhHHHHHHHHHHHHHCCCCC
Confidence            999865432                              22455677777777777777665554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=1.6e-30  Score=215.17  Aligned_cols=224  Identities=16%  Similarity=0.184  Sum_probs=142.2

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||||++.....      .......+.++..+++.++||||+ +++.  ...
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN------KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT   97 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC------HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc------chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC
Confidence            456888999999999999999994  89999998653321      111223344555677888999999 2221  111


Q ss_pred             hhhhHHHhhc-------cCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          90 AIQTLISNLD-------SQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        90 ~~~~l~~~l~-------~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+.+++++.       ... ...+++..+..++.|++.||.|||++ |++||||||+|||++.++.+||+|||++....
T Consensus        98 ~~~lv~e~~~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             cEEEEEeccCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            1222333331       110 23588899999999999999999995 99999999999999999999999999986654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc-------ccccccceeEeecceeeeecccccccc----HHHHHHHHHhh
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-------QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSS  230 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~  230 (260)
                      ......           ...+...+.+|+..       ..++.++|+||+|++++++++|..|+.    ..+.+..+..+
T Consensus       177 ~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  245 (318)
T 2dyl_A          177 DDKAKD-----------RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE  245 (318)
T ss_dssp             ---------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS
T ss_pred             CCcccc-----------ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc
Confidence            322111           00111112222222       347789999999999999999988865    34555555554


Q ss_pred             cccc------CCccHHHHHHHHHHhccccccc
Q psy7935         231 YRRQ------NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~~~------~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..      .++.+.+++.+|...++..|..
T Consensus       246 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  277 (318)
T 2dyl_A          246 EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPK  277 (318)
T ss_dssp             CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC
T ss_pred             CCCCCCccCCCCHHHHHHHHHHccCChhHCcC
Confidence            3321      2456778888888777777753

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=4.5e-30  Score=213.58  Aligned_cols=194  Identities=17%  Similarity=0.166  Sum_probs=127.5

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHh-hhcccCCCCeE-EeC--
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIR-GLMKCRMADIC-LDD--   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~~i~-~~~--   85 (260)
                      ....+.|+..+.||+|+||.||+|.+.  |+.||||++.....      .. ....+..|+. +++.++||||+ +++  
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~------~~-~~~~~~~e~~~~~~~~~h~niv~~~~~~   90 (327)
T 3aln_A           18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD------EK-EQKQLLMDLDVVMRSSDCPYIVQFYGAL   90 (327)
T ss_dssp             CCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC------HH-HHHHHHHHHHHHHSSCCCTTBCCEEEEE
T ss_pred             ccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC------ch-HHHHHHHHHHHHHHcCCCCcEeeeeeEE
Confidence            345567889999999999999999995  89999998653211      11 1334555665 77788999999 322  


Q ss_pred             --CCchhh------hhHHHhhccC--cccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 --VQKSAI------QTLISNLDSQ--NITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 --~~~~~~------~~l~~~l~~~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                        ....++      ++|.+++...  .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+||
T Consensus        91 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Df  170 (327)
T 3aln_A           91 FREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF  170 (327)
T ss_dssp             ECSSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCC
T ss_pred             EeCCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccC
Confidence              222222      3333333210  0134588899999999999999999999 9999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcc--ccccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG--TLQSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |++...........       ...+..+.+|+....  ....++.++|+||+|++++++++|..|+.
T Consensus       171 g~~~~~~~~~~~~~-------~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (327)
T 3aln_A          171 GISGQLVDSIAKTR-------DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP  230 (327)
T ss_dssp             SSSCC-------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred             CCceeccccccccc-------CCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            99976543321110       011111222221110  11347889999999999999999987754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.96  E-value=4.4e-31  Score=223.36  Aligned_cols=182  Identities=17%  Similarity=0.126  Sum_probs=133.8

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-----------CCCe
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-----------MADI   81 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-----------h~~i   81 (260)
                      .+.|++.+.||+|+||.||+|++  +++.||||++...     .    .....+.+|+.++++++           |+||
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i   88 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----K----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHI   88 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----H----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----c----cchhhhhHHHHHHHHhhcccccchhccccchH
Confidence            45789999999999999999998  4899999986321     1    12456788999888876           7888


Q ss_pred             E-EeCC------Cchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCcEEEcc
Q psy7935          82 C-LDDV------QKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSN-NIIHGDLTTSNMILSS  145 (260)
Q Consensus        82 ~-~~~~------~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~  145 (260)
                      + +++.      ....+        ++|.+++.... ...+++..+..++.|++.||+|||++ ||+||||||+|||++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~  167 (373)
T 1q8y_A           89 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  167 (373)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             HHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence            8 2221      11111        56666665433 33488899999999999999999998 9999999999999954


Q ss_pred             ------CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         146 ------DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       146 ------~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                            .+.+||+|||++.........             ..++..+.+|+..  ..++.++|+||+|++++++++|..|
T Consensus       168 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  234 (373)
T 1q8y_A          168 VDSPENLIQIKIADLGNACWYDEHYTN-------------SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL  234 (373)
T ss_dssp             EETTTTEEEEEECCCTTCEETTBCCCS-------------CCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCC
T ss_pred             cCCCcCcceEEEcccccccccCCCCCC-------------CCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence                  448999999999765432111             0111122233333  4478899999999999999999888


Q ss_pred             cc
Q psy7935         218 VD  219 (260)
Q Consensus       218 ~~  219 (260)
                      +.
T Consensus       235 f~  236 (373)
T 1q8y_A          235 FE  236 (373)
T ss_dssp             C-
T ss_pred             CC
Confidence            75

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.96  E-value=1.5e-30  Score=221.13  Aligned_cols=183  Identities=20%  Similarity=0.171  Sum_probs=132.4

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCC-----eE-E-
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MAD-----IC-L-   83 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~-----i~-~-   83 (260)
                      ..+.|++.+.||+|+||.||+|++.  ++.||||++....         .....+.+|+.+++.++ |++     ++ + 
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---------AFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH---------HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH---------HHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            3466899999999999999999984  8899999864211         11345677888887775 443     54 2 


Q ss_pred             ---eCCCchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhh--hCCceecCCCCCcEEEc--cCCcEE
Q psy7935          84 ---DDVQKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMH--SNNIIHGDLTTSNMILS--SDHHLV  150 (260)
Q Consensus        84 ---~~~~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH--~~~i~H~dlkp~Nill~--~~~~~k  150 (260)
                         ......++      ++|.+++.... ...+++..+..++.|++.||.|||  ++||+||||||+|||++  .++.+|
T Consensus       123 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~k  201 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEMLSYNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIK  201 (382)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEE
T ss_pred             eeeccCCceEEEEecCCCCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEE
Confidence               22222222      56666665543 234888999999999999999999  46999999999999995  478899


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |+|||++........             ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       202 L~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~  259 (382)
T 2vx3_A          202 IVDFGSSCQLGQRIY-------------QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS  259 (382)
T ss_dssp             ECCCTTCEETTCCCC-------------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             EEeccCceecccccc-------------cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999976543211             01111122333333  357899999999999999999998876

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.96  E-value=2.3e-30  Score=216.27  Aligned_cols=178  Identities=19%  Similarity=0.271  Sum_probs=121.3

Q ss_pred             cccCcce-eeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHH-hhhcccCCCCeE-EeCCC---
Q psy7935          16 MVLQPAE-CFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEI-RGLMKCRMADIC-LDDVQ---   87 (260)
Q Consensus        16 ~~~~~~~-~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~-~~~~~---   87 (260)
                      +.|++.+ .||+|+||.||+|++.  |+.||||++...             ....+|+ ..++.+.||||+ +++..   
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~   94 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-------------PKARQEVDHHWQASGGPHIVCILDVYENM   94 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-------------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-------------HHHHHHHHHHHHhcCCCChHHHHHHHhhc
Confidence            4577655 5999999999999995  899999986321             0112222 335667899998 22221   


Q ss_pred             ---chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEE
Q psy7935          88 ---KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMI  152 (260)
Q Consensus        88 ---~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~  152 (260)
                         ...+         ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+|||++.   ++.+||+
T Consensus        95 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~  173 (336)
T 3fhr_A           95 HHGKRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT  173 (336)
T ss_dssp             ETTEEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred             cCCCceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEe
Confidence               1112         46666665543 346899999999999999999999999999999999999986   4569999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||++.........            ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       174 Dfg~~~~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (336)
T 3fhr_A          174 DFGFAKETTQNALQ------------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY  230 (336)
T ss_dssp             CCTTCEEC----------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred             ccccceeccccccc------------cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence            99999755432111            11112222333333  457889999999999999999988764

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=4.8e-31  Score=227.34  Aligned_cols=210  Identities=17%  Similarity=0.219  Sum_probs=138.3

Q ss_pred             ccccccCcceeeccCCcee-EEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCC---
Q psy7935          13 ASDMVLQPAECFKQGAEGR-IFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDV---   86 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~-V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~---   86 (260)
                      .....|++.+.||+|+||. ||++..+|+.||||++.....           ..+.+|+.+++.+ +||||+ +++.   
T Consensus        21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----------~~~~~E~~~l~~l~~HpnIv~l~~~~~~   89 (432)
T 3p23_A           21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----------SFADREVQLLRESDEHPNVIRYFCTEKD   89 (432)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----------EECHHHHHHHHHSCCCTTBCCEEEEEEE
T ss_pred             EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----------HHHHHHHHHHHhccCCCCcCeEEEEEec
Confidence            3344588899999999998 455555799999998643221           1245789999988 799999 3222   


Q ss_pred             -Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-----CCcEEEEee
Q psy7935          87 -QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----DHHLVMIDF  154 (260)
Q Consensus        87 -~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-----~~~~kl~DF  154 (260)
                       ...++      ++|.+++....  ....+..++.++.|++.||+|||++||+||||||+|||++.     ...+||+||
T Consensus        90 ~~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DF  167 (432)
T 3p23_A           90 RQFQYIAIELCAATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDF  167 (432)
T ss_dssp             TTEEEEEEECCSEEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred             CCEEEEEEECCCCCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence             11122      67777776543  12333445679999999999999999999999999999953     346889999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecc-cccccc---------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVST-EDKAVD---------  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~-~~~~~~---------  219 (260)
                      |+++............       ....++..+.+|+..     ..++.++|+||+|++++++++ |..|+.         
T Consensus       168 G~a~~~~~~~~~~~~~-------~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~  240 (432)
T 3p23_A          168 GLCKKLAVGRHSFSRR-------SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI  240 (432)
T ss_dssp             TEEECC-------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH
T ss_pred             cceeeccCCCcceeec-------cccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH
Confidence            9997664332110000       011112222333333     345678999999999999999 665543         


Q ss_pred             -------------------HHHHHHHHHhhccccCCccHHHHH
Q psy7935         220 -------------------FRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       220 -------------------~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                                         ..+++.+|+...+.. |+++.+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~-Rps~~evl  282 (432)
T 3p23_A          241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQK-RPSAKHVL  282 (432)
T ss_dssp             HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGG-SCCHHHHH
T ss_pred             HhccCCccccCccccccHHHHHHHHHHHhCCHhh-CCCHHHHH
Confidence                               345666777655554 55666655

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.1e-29  Score=226.91  Aligned_cols=187  Identities=19%  Similarity=0.188  Sum_probs=136.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC----
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDVQ----   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~----   87 (260)
                      .+.|++.+.||+|+||.||+|.+  +|+.||||++....       .....+.+.+|++++++++||||+ +++..    
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-------~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~   85 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-------SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ   85 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-------CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-------CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc
Confidence            46699999999999999999998  48999999753221       112356789999999999999999 33321    


Q ss_pred             ----chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCc---EEE
Q psy7935          88 ----KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHH---LVM  151 (260)
Q Consensus        88 ----~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~---~kl  151 (260)
                          ....         ++|.+++........+++..++.++.|++.||+|||++||+||||||+|||++.++.   +||
T Consensus        86 ~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL  165 (676)
T 3qa8_A           86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKI  165 (676)
T ss_dssp             CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEE
T ss_pred             cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEE
Confidence                1111         456666654332335888889999999999999999999999999999999997654   999


Q ss_pred             EeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         152 IDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       152 ~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +|||++..........           ...+...+.+|+..  ..++.++|+||+|++++++++|..|+.
T Consensus       166 ~DFG~a~~~~~~~~~~-----------~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~  224 (676)
T 3qa8_A          166 IDLGYAKELDQGELCT-----------EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL  224 (676)
T ss_dssp             CSCCCCCBTTSCCCCC-----------CCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cccccccccccccccc-----------cccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence            9999997654432111           11112222333333  457889999999999999999988864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=3.1e-28  Score=214.96  Aligned_cols=198  Identities=32%  Similarity=0.482  Sum_probs=141.5

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE---EeCCCchhhhhHHH
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC---LDDVQKSAIQTLIS   96 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~---~~~~~~~~~~~l~~   96 (260)
                      ..+.||+|+||.||+|...+..+++|....+..+.+........+++.+|++++++++||||+   .++......+.++|
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE  419 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS  419 (540)
T ss_dssp             --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred             CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence            357899999999999988899999999877777766666666678899999999999999998   33333333355777


Q ss_pred             hhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccc
Q psy7935          97 NLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRN  176 (260)
Q Consensus        97 ~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~  176 (260)
                      |+.+..+...+..  ...++.|++.||+|||++||+||||||+|||++.  .+||+|||+++......+...+.+.....
T Consensus       420 ~~~ggsL~~~l~~--~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~  495 (540)
T 3en9_A          420 YINGKLAKDVIED--NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKA  495 (540)
T ss_dssp             CCCSEEHHHHSTT--CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhh
Confidence            7766554332222  5579999999999999999999999999999998  99999999998775544333332211111


Q ss_pred             eeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHHHHHHhccccccc
Q psy7935         177 LTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                         ..|-...-..++++....+|... ...|.++++++++++.|+|+.
T Consensus       496 -----------------------------------~~GT~~y~APEv~~~~~~~Y~~~-~d~ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          496 -----------------------------------VLSTHHEKFDEIWERFLEGYKSV-YDRWEIILELMKDVERRARYV  539 (540)
T ss_dssp             -----------------------------------HHHHCGGGHHHHHHHHHHHHHHH-CTTHHHHHHHHHHHHTCSCCC
T ss_pred             -----------------------------------hcCCCCcCCHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhccccC
Confidence                                               11111122567777777777655 367899999999999999986


Q ss_pred             c
Q psy7935         257 C  257 (260)
Q Consensus       257 ~  257 (260)
                      +
T Consensus       540 e  540 (540)
T 3en9_A          540 E  540 (540)
T ss_dssp             -
T ss_pred             C
Confidence            3

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=9.5e-27  Score=206.57  Aligned_cols=179  Identities=12%  Similarity=0.091  Sum_probs=103.5

Q ss_pred             ceeeccCCceeEEEEEE--cCccEEEEEeecccCCCc--hhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCCCchh
Q psy7935          21 AECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHP--KLDEALTKERITSEIRGLMKC-RMADIC-----LDDVQKSA   90 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~~~~~   90 (260)
                      ....+.|+.|.+..++.  .|+.+++|++........  ......+.+.+.+|+++|+++ .|+||+     +.+....+
T Consensus       239 ~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          239 QNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             ECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             hhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            44566777777776664  599999998765432211  122334567799999999999 699998     33333333


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                        .+|||+.+..+      ...+++.   +|+.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+......
T Consensus       319 --LVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          319 --LVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             --EEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             --EEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence              46666665544      2245544   478999999999999999999999999999999999999999998665432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeeccc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      ....      ..++++.+++    |+.. +.+...+|+||+|++.+++.++
T Consensus       394 ~~~~------t~vGTp~YmA----PE~l~g~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          394 SWPT------NLVQSFFVFV----NELFAENKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             CCSH------HHHHHHHHHH----HHHC-----------------CCCCTT
T ss_pred             cccc------Cceechhhcc----HHHhCCCCCCcccccccccchhhhccc
Confidence            2111      1122222333    3322 3466789999999999988776

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.90  E-value=2.9e-24  Score=174.89  Aligned_cols=140  Identities=19%  Similarity=0.151  Sum_probs=104.1

Q ss_pred             cCcceeeccCCceeEEEEEE-cCccEEEEEeecccCCCchh----------hHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          18 LQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKL----------DEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~----------~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      +.+.+.||+|+||.||+|++ +|+.||+|.+..........          +.......+.+|++++++++|+++. +++
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~~  171 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA  171 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEEe
Confidence            44569999999999999999 48899999864322111000          0012356789999999999865554 444


Q ss_pred             CCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          86 VQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        86 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...  .+.+++|+.+..+.. +.......++.|++.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus       172 ~~~--~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~  243 (282)
T 1zar_A          172 WEG--NAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVG  243 (282)
T ss_dssp             EET--TEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCEETT
T ss_pred             ccc--eEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECC
Confidence            333  345888887766544 33445567999999999999999999999999999999 9999999999997543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.86  E-value=3.5e-22  Score=160.61  Aligned_cols=141  Identities=16%  Similarity=0.195  Sum_probs=99.3

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCcc--EEEEEeecccCCCchh----------------hHHHHHHHHHHHHhhhccc
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRS--VLVKERFSKKYRHPKL----------------DEALTKERITSEIRGLMKC   76 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~--vavK~~~~~~~~~~~~----------------~~~~~~~~~~~e~~~l~~~   76 (260)
                      .+++.+.||+|+||.||+|.+  +|+.  ||||++..........                ........+.+|+.++.++
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            356789999999999999998  6888  9999854321110000                0112234688999999999


Q ss_pred             CCCCeE---EeCCCchhhhhHHHhhcc-C----ccc---ccchHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCcEEEc
Q psy7935          77 RMADIC---LDDVQKSAIQTLISNLDS-Q----NIT---RENISDIIKLLSIEIGTTLSVMH-SNNIIHGDLTTSNMILS  144 (260)
Q Consensus        77 ~h~~i~---~~~~~~~~~~~l~~~l~~-~----~~~---~~~~~~~~~~i~~~i~~~l~~LH-~~~i~H~dlkp~Nill~  144 (260)
                      .|+++.   .+.....  +.+++|+.. .    .+.   ...++..+..++.|++.||.||| ++||+||||||+|||++
T Consensus       128 ~~~~i~~p~~~~~~~~--~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~  205 (258)
T 1zth_A          128 KEAGVSVPQPYTYMKN--VLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI  205 (258)
T ss_dssp             HHTTCCCCCEEEEETT--EEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES
T ss_pred             HhCCCCCCeEEEcCCC--EEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc
Confidence            887654   3322222  336677732 1    111   11224466789999999999999 99999999999999999


Q ss_pred             cCCcEEEEeeccccccc
Q psy7935         145 SDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~  161 (260)
                      .  .++|+|||+|....
T Consensus       206 ~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          206 D--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             S--SEEECCCTTCEETT
T ss_pred             C--cEEEEECcccccCC
Confidence            7  99999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.79  E-value=8e-20  Score=153.18  Aligned_cols=142  Identities=14%  Similarity=0.119  Sum_probs=100.4

Q ss_pred             ccCcceeeccCCceeEEEEEE-cCccEEEEEeecccC--CCc----------hh--hHHHHHHHHHHHHhhhcccCCCCe
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKY--RHP----------KL--DEALTKERITSEIRGLMKCRMADI   81 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~----------~~--~~~~~~~~~~~e~~~l~~~~h~~i   81 (260)
                      .|.+.+.||.|++|.||+|.+ .|++||||++.....  +..          ..  .....+....+|...+.++.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            378899999999999999998 589999998543211  000          00  001112234567777777765555


Q ss_pred             E---EeCCCchhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----------c
Q psy7935          82 C---LDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----------H  148 (260)
Q Consensus        82 ~---~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----------~  148 (260)
                      .   .++.....+  +|+|+.+..+.+.........++.|++.+|.+||++||+||||||.|||++.++          .
T Consensus       176 ~vp~p~~~~~~~L--VME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~  253 (397)
T 4gyi_A          176 PVPEPIAQSRHTI--VMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLT  253 (397)
T ss_dssp             SCCCEEEEETTEE--EEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEE
T ss_pred             CCCeeeeccCceE--EEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccc
Confidence            4   333333333  888887766544333444566889999999999999999999999999999866          4


Q ss_pred             EEEEeecccccc
Q psy7935         149 LVMIDFGLSQIK  160 (260)
Q Consensus       149 ~kl~DFg~~~~~  160 (260)
                      ++|+||+-+...
T Consensus       254 ~~iID~~Q~V~~  265 (397)
T 4gyi_A          254 PIIIXFPQMVSM  265 (397)
T ss_dssp             EEECCCTTCEET
T ss_pred             eEEEEeCCcccC
Confidence            999999977543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.13  E-value=2.6e-11  Score=97.16  Aligned_cols=134  Identities=15%  Similarity=0.084  Sum_probs=91.0

Q ss_pred             cCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCC---eEEeCCCchhhhh
Q psy7935          18 LQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MAD---ICLDDVQKSAIQT   93 (260)
Q Consensus        18 ~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~---i~~~~~~~~~~~~   93 (260)
                      +.+...++.|+.+.||++...++.+++|+....... .       ...+.+|+.+++.+. +.+   ++.........+.
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~-~-------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKG-T-------TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTT-S-------TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             ceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCC-C-------HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            556677888889999999888889999985332111 1       124677888887774 323   3311222233355


Q ss_pred             HHHhhccCcccccc-hHHHHHHHHHHHHHHHHHhhh--------------------------------------------
Q psy7935          94 LISNLDSQNITREN-ISDIIKLLSIEIGTTLSVMHS--------------------------------------------  128 (260)
Q Consensus        94 l~~~l~~~~~~~~~-~~~~~~~i~~~i~~~l~~LH~--------------------------------------------  128 (260)
                      +++++.+..+.... +......++.+++.+|..||+                                            
T Consensus        88 v~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (263)
T 3tm0_A           88 LMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP  167 (263)
T ss_dssp             EEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred             EEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence            88888876532211 122234578899999999998                                            


Q ss_pred             ---------------CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 ---------------NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ---------------~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                                     ..++|+|++|.|||++.+..+.|+||+.+..
T Consensus       168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                           4489999999999998765667999998754

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.07  E-value=4.7e-11  Score=95.26  Aligned_cols=126  Identities=13%  Similarity=0.162  Sum_probs=83.5

Q ss_pred             eeec-cCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCe-E----EeCCCchhhhhH
Q psy7935          22 ECFK-QGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI-C----LDDVQKSAIQTL   94 (260)
Q Consensus        22 ~~lg-~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-~----~~~~~~~~~~~l   94 (260)
                      ..++ .|+.+.||++... |..+++|+....     .      ...+.+|+.+++.+.+.++ +    .........+.+
T Consensus        25 ~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v   93 (264)
T 1nd4_A           25 AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-----A------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL   93 (264)
T ss_dssp             EECSCTTSSCEEEEEECTTSCCEEEEEECSC-----T------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred             EecccCCCCceEEEEecCCCCeEEEEeCCcc-----c------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence            4454 5666999999764 678999974321     1      1235677777777754444 2    112222223458


Q ss_pred             HHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCC--------------------------------------------
Q psy7935          95 ISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN--------------------------------------------  130 (260)
Q Consensus        95 ~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------------  130 (260)
                      ++++.+..+.  ........++.+++..|..||+..                                            
T Consensus        94 ~e~i~G~~l~--~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (264)
T 1nd4_A           94 LGEVPGQDLL--SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF  171 (264)
T ss_dssp             EECCSSEETT--TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred             EEecCCcccC--cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence            8888876542  111112246788888899998753                                            


Q ss_pred             --------------ceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         131 --------------IIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       131 --------------i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                                    ++|+|++|.|||++.++.+.|+||+.+...
T Consensus       172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                          999999999999987666679999987543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.04  E-value=2.8e-10  Score=95.32  Aligned_cols=134  Identities=19%  Similarity=0.287  Sum_probs=93.3

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEee--cccCCCchhhHHHHHHHHHHHHhhhcccCCCCe-----E-EeCCCc--h
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERF--SKKYRHPKLDEALTKERITSEIRGLMKCRMADI-----C-LDDVQK--S   89 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~-~~~~~~--~   89 (260)
                      .++.++.|.++.||++...+..+++|+..  ....    .   .....+.+|..+++.+...++     + +.....  .
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~----~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g  114 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKL----L---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIG  114 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC-----------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTS
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCC----C---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccC
Confidence            36789999999999999888889999643  1110    0   012457788888887764333     2 222221  1


Q ss_pred             hhhhHHHhhccCccc----ccchHHHHHHHHHHHHHHHHHhhh-------------------------------------
Q psy7935          90 AIQTLISNLDSQNIT----RENISDIIKLLSIEIGTTLSVMHS-------------------------------------  128 (260)
Q Consensus        90 ~~~~l~~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~LH~-------------------------------------  128 (260)
                      ..+.+++++.+..+.    ..+++.....++.+++..|..||+                                     
T Consensus       115 ~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             SCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             CeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            235689999886542    235677778899999999999997                                     


Q ss_pred             ---------------------CCceecCCCCCcEEEccCC--cEEEEeecccccc
Q psy7935         129 ---------------------NNIIHGDLTTSNMILSSDH--HLVMIDFGLSQIK  160 (260)
Q Consensus       129 ---------------------~~i~H~dlkp~Nill~~~~--~~kl~DFg~~~~~  160 (260)
                                           ..++|+|++|.|||++.++  .+.|+||+.+..-
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                 3589999999999999764  3689999988653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.78  E-value=3.3e-10  Score=92.72  Aligned_cols=128  Identities=15%  Similarity=0.202  Sum_probs=88.7

Q ss_pred             ceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-----EeCCCch---hh
Q psy7935          21 AECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-----LDDVQKS---AI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-----~~~~~~~---~~   91 (260)
                      ++.++.|..+.||++.   ..+++|+...     .     .....+.+|.++++.+ .+..+.     ..+....   ..
T Consensus        25 i~~~~~G~~n~v~~v~---~~~vlR~~~~-----~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~   91 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFIFKFPKH-----S-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMS   91 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEEEEEESS-----H-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCS
T ss_pred             eEecCCCCcceEEEEC---CEEEEEecCC-----c-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcc
Confidence            5678999999999874   6799997321     1     1235688899888777 333332     2222222   12


Q ss_pred             hhHHHhhccCcccc----cchHHHHHHHHHHHHHHHHHhhh---------------------------------------
Q psy7935          92 QTLISNLDSQNITR----ENISDIIKLLSIEIGTTLSVMHS---------------------------------------  128 (260)
Q Consensus        92 ~~l~~~l~~~~~~~----~~~~~~~~~i~~~i~~~l~~LH~---------------------------------------  128 (260)
                      +.+++++.+..+..    .++.+....++.+++..+..||+                                       
T Consensus        92 ~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           92 FAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             CEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             eEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            55678888765421    24555667788888888888885                                       


Q ss_pred             -------------------CCceecCCCCCcEEEcc--CCcEEEEeeccccccc
Q psy7935         129 -------------------NNIIHGDLTTSNMILSS--DHHLVMIDFGLSQIKV  161 (260)
Q Consensus       129 -------------------~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~~~~  161 (260)
                                         ..++|+|++|.||+++.  +..+.|+||+.+..-.
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~  225 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD  225 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC
Confidence                               13699999999999998  5678899999886543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.39  E-value=1.3e-06  Score=71.30  Aligned_cols=131  Identities=14%  Similarity=0.176  Sum_probs=82.8

Q ss_pred             cceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCC-Ce-----E-EeCCCchhhh
Q psy7935          20 PAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMA-DI-----C-LDDVQKSAIQ   92 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~-~i-----~-~~~~~~~~~~   92 (260)
                      .++.++.|..+.||+.   |+.+++|+- .    .+.     ....+.+|..+++.+.+. .+     + +........+
T Consensus        23 ~v~~l~~G~~n~v~~v---g~~~VlR~~-~----~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~   89 (306)
T 3tdw_A           23 SVESLGEGFRNYAILV---NGDWVFRFP-K----SQQ-----GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPF   89 (306)
T ss_dssp             CEEEEEECSSEEEEEE---TTTEEEEEE-S----SHH-----HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEE
T ss_pred             eeeecCCCcceeEEEE---CCEEEEEec-C----Cch-----HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceE
Confidence            4677899999999998   788999972 1    111     235688999999888642 22     2 2211112223


Q ss_pred             hHHHhhccCcccc----cchHHHHHHHHHHHHHHHHHhhhC---------------------------------------
Q psy7935          93 TLISNLDSQNITR----ENISDIIKLLSIEIGTTLSVMHSN---------------------------------------  129 (260)
Q Consensus        93 ~l~~~l~~~~~~~----~~~~~~~~~i~~~i~~~l~~LH~~---------------------------------------  129 (260)
                      .+++++.+..+..    .++......++.+++..|..||+.                                       
T Consensus        90 ~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           90 VGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             EEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             EEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            5777776654311    123334445556666666655532                                       


Q ss_pred             ---------------------CceecCCCCCcEEEcc---CCc-EEEEeeccccccccc
Q psy7935         130 ---------------------NIIHGDLTTSNMILSS---DHH-LVMIDFGLSQIKVST  163 (260)
Q Consensus       130 ---------------------~i~H~dlkp~Nill~~---~~~-~kl~DFg~~~~~~~~  163 (260)
                                           .++|+|++|.|||++.   ++. +.|+||+.+..-...
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~~  228 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPD  228 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECGG
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCHH
Confidence                                 3599999999999997   345 589999988654443

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.01  E-value=3.9e-05  Score=63.77  Aligned_cols=33  Identities=12%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++|+|+.|.|||++.+..+.|+||+.+..-.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~g~  254 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVALGP  254 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEEEC
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccccCC
Confidence            368999999999999965457999999886543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.94  E-value=9.8e-06  Score=68.53  Aligned_cols=32  Identities=28%  Similarity=0.428  Sum_probs=26.6

Q ss_pred             hCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         128 SNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       128 ~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ...++|+|+.|.|||++.+ .++++||..+..-
T Consensus       226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~G  257 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFYG  257 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS-CEEECCCTTCEEE
T ss_pred             CCceeeCCCCcCcEEEeCC-CeEEEeCcccccC
Confidence            3579999999999999865 5899999877643

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.89  E-value=3e-05  Score=61.79  Aligned_cols=125  Identities=18%  Similarity=0.214  Sum_probs=73.9

Q ss_pred             eeeccCCce-eEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC----CCCeE-E-eCCCchhhh
Q psy7935          22 ECFKQGAEG-RIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR----MADIC-L-DDVQKSAIQ   92 (260)
Q Consensus        22 ~~lg~G~~g-~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~----h~~i~-~-~~~~~~~~~   92 (260)
                      +.+..|..| .||+....  +..+++|+-...           ....+.+|...++.+.    -|.++ + .+....  +
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~--~   96 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDA--W   96 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-----------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEE--E
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-----------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeE--E
Confidence            445556554 68987763  568999973211           1245677888777663    23333 2 222222  3


Q ss_pred             hHHHhhccCccccc--chHHHHHHHHHHHHHHHHHhhhC-----------------------------------------
Q psy7935          93 TLISNLDSQNITRE--NISDIIKLLSIEIGTTLSVMHSN-----------------------------------------  129 (260)
Q Consensus        93 ~l~~~l~~~~~~~~--~~~~~~~~i~~~i~~~l~~LH~~-----------------------------------------  129 (260)
                      .+++++.+..+...  ........+..+++..|..||..                                         
T Consensus        97 lvme~l~G~~~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (272)
T 4gkh_A           97 LLTTAIPGKTAFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV  176 (272)
T ss_dssp             EEEECCCSEEHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred             EEEEeeCCccccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence            36666665432110  01112223555666666666631                                         


Q ss_pred             -----------------CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         130 -----------------NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       130 -----------------~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                                       .++|+|+.|.|||++.++.+-|+||+.+..
T Consensus       177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                             158999999999999877777999998754

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.85  E-value=4e-05  Score=63.15  Aligned_cols=32  Identities=25%  Similarity=0.444  Sum_probs=28.2

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++|+|+++.|||++.++.+.|+||+.+..-
T Consensus       222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g  253 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD  253 (346)
T ss_dssp             CCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred             CceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence            57999999999999987789999999987543

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.84  E-value=5.2e-05  Score=61.57  Aligned_cols=30  Identities=17%  Similarity=0.325  Sum_probs=25.2

Q ss_pred             ceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ++|+|+.|.||| ..++.+.++||..+....
T Consensus       175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~  204 (301)
T 3dxq_A          175 ACHCDPLCENFL-DTGERMWIVDWEYSGMND  204 (301)
T ss_dssp             EECSCCCGGGEE-ECSSCEEECCCTTCEEEC
T ss_pred             eeccCCCcCCEE-ECCCCEEEEecccccCCC
Confidence            799999999999 556788999999876543

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.73  E-value=0.00025  Score=60.40  Aligned_cols=34  Identities=29%  Similarity=0.459  Sum_probs=28.8

Q ss_pred             hhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         127 HSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       127 H~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      +...++|+|++|.|||++.++ ++++||+.+..-.
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            456799999999999999766 9999999886543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.55  E-value=0.00011  Score=60.02  Aligned_cols=32  Identities=28%  Similarity=0.398  Sum_probs=26.8

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .+++|+|+.+.|||++.+..+.|+||+.+..-
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~g  218 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFACND  218 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhccCc
Confidence            36999999999999997666689999987543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.33  E-value=0.00022  Score=57.38  Aligned_cols=54  Identities=13%  Similarity=0.069  Sum_probs=36.6

Q ss_pred             ccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      ......++.+|.|..+.||+.+.. |+++++|+........        ...+..|...++.+
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~--------~~~~~~Ea~~L~~L   68 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPAL--------DGLFRAEALGLDWL   68 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCC--------TTHHHHHHHHHHHH
T ss_pred             CCCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcch--------hhHHHHHHHHHHHH
Confidence            334455788999999999999985 8899999743222111        12466777766655

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.23  E-value=0.00051  Score=56.05  Aligned_cols=47  Identities=17%  Similarity=0.103  Sum_probs=34.4

Q ss_pred             CcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc
Q psy7935          19 QPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC   76 (260)
Q Consensus        19 ~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~   76 (260)
                      ...+.++.|..+.+|+....++.+++|+....           ....+..|.+.++.+
T Consensus        39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~L~~L   85 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERS-----------YRSMFRAEADQLALL   85 (312)
T ss_dssp             CEEEEECCSSSSEEEEEESSSCEEEEEEEEGG-----------GHHHHHHHHHHHHHH
T ss_pred             eeeEEeCCccceeeeEEEECCCeEEEEeCCcc-----------cHHHHHHHHHHHHHH
Confidence            34678999999999999887888999974321           134567777777665

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.22  E-value=0.00038  Score=59.48  Aligned_cols=33  Identities=30%  Similarity=0.544  Sum_probs=26.4

Q ss_pred             CceecCCCCCcEEEccC----------------------------CcEEEEeecccccccc
Q psy7935         130 NIIHGDLTTSNMILSSD----------------------------HHLVMIDFGLSQIKVS  162 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~----------------------------~~~kl~DFg~~~~~~~  162 (260)
                      .++|+|+.+.|||++.+                            +.+.++||..+.....
T Consensus       250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~g~p  310 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASYNYR  310 (429)
T ss_dssp             EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEEEEH
T ss_pred             EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCcCcc
Confidence            58999999999999875                            6789999988765433

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.96  E-value=0.0018  Score=55.77  Aligned_cols=27  Identities=11%  Similarity=0.187  Sum_probs=21.2

Q ss_pred             ceeeccCCceeEEEEEEcC--ccEEEEEe
Q psy7935          21 AECFKQGAEGRIFKTEYLG--RSVLVKER   47 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~~--~~vavK~~   47 (260)
                      ++.|+.|-.+.+|++...+  +.+++|+.
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~  141 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLY  141 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEEC
Confidence            6788899999999999865  78999974

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.95  E-value=0.00039  Score=58.03  Aligned_cols=30  Identities=33%  Similarity=0.503  Sum_probs=25.0

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      .++|+|+.+.|||++.+ .+.++||..+...
T Consensus       213 ~l~HgDl~~~Nil~~~~-~~~lID~e~a~~g  242 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNK-CLRLIDFEYSGFN  242 (369)
T ss_dssp             EEECSCCCGGGEEECC--CEEECCCTTCEEE
T ss_pred             EEEeCCCCcccEEecCC-cEEEEEecCCCCC
Confidence            58999999999999865 4899999987644

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.90  E-value=0.0013  Score=55.23  Aligned_cols=32  Identities=28%  Similarity=0.540  Sum_probs=27.8

Q ss_pred             CceecCCCCCcEEEccC----CcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMILSSD----HHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~----~~~kl~DFg~~~~~~  161 (260)
                      .++|+|+.+.|||++.+    +.+.++||..+....
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~~~  256 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNY  256 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEEEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCcCC
Confidence            58999999999999876    789999999886543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.25  E-value=0.0031  Score=53.63  Aligned_cols=31  Identities=29%  Similarity=0.574  Sum_probs=27.0

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++|+|+.+.||| +.++.+.++||..+....
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~~~  293 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAINF  293 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEEEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCcCC
Confidence            4899999999999 778899999999886543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.15  E-value=0.011  Score=48.36  Aligned_cols=36  Identities=17%  Similarity=0.329  Sum_probs=29.4

Q ss_pred             hCCceecCCCCCcEEEccC----CcEEEEeeccccccccc
Q psy7935         128 SNNIIHGDLTTSNMILSSD----HHLVMIDFGLSQIKVST  163 (260)
Q Consensus       128 ~~~i~H~dlkp~Nill~~~----~~~kl~DFg~~~~~~~~  163 (260)
                      ...++|+|+.+.|||++.+    +.+.|+||+.+..-...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~~  221 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHRA  221 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECTT
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCCH
Confidence            3469999999999999874    68999999988654443

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=94.97  E-value=0.021  Score=46.49  Aligned_cols=30  Identities=20%  Similarity=0.320  Sum_probs=25.7

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++|+|+++.|||++ + .+.++||+.+..-
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence            4589999999999999 5 8999999877543

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=94.20  E-value=0.036  Score=45.55  Aligned_cols=34  Identities=15%  Similarity=0.401  Sum_probs=28.7

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..++|+|+.+.||+++.++.+.|+||+.+.....
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~~  239 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAPK  239 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEECT
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCCH
Confidence            3699999999999999878899999987765433

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=94.13  E-value=0.085  Score=40.34  Aligned_cols=132  Identities=10%  Similarity=0.043  Sum_probs=80.8

Q ss_pred             hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeecccccccccccccccc
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDL  170 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~  170 (260)
                      -+|.+.|...  +.++++.++|.++.|.+.+|.-+-. ..-..+=+.|..|++..+|.|.+.+ ..+..   .  .  ..
T Consensus        33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~---~--~--~~  102 (229)
T 2yle_A           33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADDA---G--E--PP  102 (229)
T ss_dssp             EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccccc---c--c--cC
Confidence            4566666554  4679999999999999999888722 1111223456889999998887764 21110   0  0  00


Q ss_pred             cccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc--------HHHHHHHHHhhcc---------
Q psy7935         171 YVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD--------FRDMFNWILSSYR---------  232 (260)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~---------  232 (260)
                                 ..    +|+.. ...+.+.-|||+|+++|..+.-..|.+        +..++..|.....         
T Consensus       103 -----------~~----~pe~~~~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~  167 (229)
T 2yle_A          103 -----------PV----AGKLGYSQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGY  167 (229)
T ss_dssp             -------------------CCSSSSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTCCC---------
T ss_pred             -----------CC----ChhhccccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhcccccccccccc
Confidence                       00    11111 234567889999999988766544433        7888888765411         


Q ss_pred             ---------------ccCCccHHHHHHHHHH
Q psy7935         233 ---------------RQNRKQFETVMKTFAE  248 (260)
Q Consensus       233 ---------------~~~~~~~~~il~~l~~  248 (260)
                                     ...+.++.++++.|..
T Consensus       168 ~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~  198 (229)
T 2yle_A          168 EAAEEGLGDEDEKRKISAIRSYRDVMKLCAA  198 (229)
T ss_dssp             -----------CCSCCCCCCSHHHHHHHHHT
T ss_pred             cccccccccccccccccCcCCHHHHHHHHHh
Confidence                           1245678888888863

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=93.05  E-value=0.01  Score=48.23  Aligned_cols=25  Identities=8%  Similarity=-0.001  Sum_probs=20.2

Q ss_pred             cccccccccccceeeeee-eeeecCc
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSK  189 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~  189 (260)
                      +..+|+|++|..++++.+ +.+||..
T Consensus       225 s~ksDVwSfGvvl~El~t~g~~Pf~~  250 (308)
T 4gt4_A          225 SIDSDIWSYGVVLWEVFSYGLQPYCG  250 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CccchhhhHHHHHHHHHhCCCCCCCC
Confidence            567899999999999886 6666654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=92.98  E-value=0.015  Score=47.77  Aligned_cols=82  Identities=10%  Similarity=-0.001  Sum_probs=53.5

Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      .+..+|+|++|..++.++++.+||..........+.-  . +-....-.....++...+++.+|+...|.. |+++.|++
T Consensus       233 y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~--~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~-R~sa~el~  308 (336)
T 4g3f_A          233 CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA--S-EPPPIREIPPSCAPLTAQAIQEGLRKEPVH-RASAMELR  308 (336)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH--H-SCCGGGGSCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH--c-CCCCchhcCccCCHHHHHHHHHHccCCHhH-CcCHHHHH
Confidence            3567899999999999999999986543322111100  0 000000012234456899999999988887 57999999


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.+...
T Consensus       309 ~~l~~~  314 (336)
T 4g3f_A          309 RKVGKA  314 (336)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=92.85  E-value=0.011  Score=48.57  Aligned_cols=26  Identities=15%  Similarity=0.158  Sum_probs=21.0

Q ss_pred             ccccccccccccceeeeee-eeeecCc
Q psy7935         164 EDKAVDLYVLKRNLTTIIV-VAYCWSK  189 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~-~~~~~~~  189 (260)
                      .+..+|+|++|..++++.+ +..||..
T Consensus       237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~  263 (329)
T 4aoj_A          237 FTTESDVWSFGVVLWEIFTYGKQPWYQ  263 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CCccccccchHHHHHHHHcCCCCCCCC
Confidence            3567899999999999887 6777754

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=89.87  E-value=0.14  Score=43.13  Aligned_cols=32  Identities=28%  Similarity=0.499  Sum_probs=26.7

Q ss_pred             ceecCCCCCcEEEc------cCCcEEEEeecccccccc
Q psy7935         131 IIHGDLTTSNMILS------SDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus       131 i~H~dlkp~Nill~------~~~~~kl~DFg~~~~~~~  162 (260)
                      ++|+|+.+.|||+.      .+..++++||..|.....
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~n~~  283 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYR  283 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEEEEH
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccCCCc
Confidence            67999999999993      467899999999876543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=88.10  E-value=0.028  Score=45.19  Aligned_cols=76  Identities=11%  Similarity=0.218  Sum_probs=47.3

Q ss_pred             ccccccccccccceeeeeeeeeecCccccc-cccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQ-SYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETV  242 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  242 (260)
                      .+..+|+|++|..++.+.++.+||...... ......   .-+.... ......++++.+++.+|+...|.. |+++.++
T Consensus       206 y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i---~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~-R~s~~e~  280 (290)
T 3fpq_A          206 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSGVKPA-SFDKVAIPEVKEIIEGCIRQNKDE-RYSIKDL  280 (290)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTTCCCG-GGGGCCCHHHHHHHHHHSCSSGGG-SCCHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH---HcCCCCC-CCCccCCHHHHHHHHHHccCChhH-CcCHHHH
Confidence            356789999999999999999998643211 000000   0000000 011223355899999999988877 6788887


Q ss_pred             HH
Q psy7935         243 MK  244 (260)
Q Consensus       243 l~  244 (260)
                      ++
T Consensus       281 l~  282 (290)
T 3fpq_A          281 LN  282 (290)
T ss_dssp             HT
T ss_pred             hc
Confidence            65

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=85.97  E-value=0.058  Score=42.98  Aligned_cols=70  Identities=9%  Similarity=0.059  Sum_probs=48.1

Q ss_pred             ccccccccccceeeeeeeeeecCcccccccccc--ceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHH--LVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      ..+|+|++|..++.+.++.+||..........+  ...+.        .....+.+..+++.+|+...|.. |+++.+++
T Consensus       191 ~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~--------~p~~~s~~~~~li~~~L~~dP~~-R~s~~eil  261 (275)
T 3hyh_A          191 PEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT--------LPKFLSPGAAGLIKRMLIVNPLN-RISIHEIM  261 (275)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------CCTTSCHHHHHHHHHHSCSSGGG-SCCHHHHH
T ss_pred             ChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--------CCCCCCHHHHHHHHHHccCChhH-CcCHHHHH
Confidence            468999999999999999999876543221111  00111        11223466899999999987877 67888887


Q ss_pred             H
Q psy7935         244 K  244 (260)
Q Consensus       244 ~  244 (260)
                      +
T Consensus       262 ~  262 (275)
T 3hyh_A          262 Q  262 (275)
T ss_dssp             H
T ss_pred             c
Confidence            6

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=85.74  E-value=0.056  Score=44.64  Aligned_cols=75  Identities=12%  Similarity=0.287  Sum_probs=49.6

Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      .+..+|+|++|..++.++++.++|..........+.--   +-  +.......+.++.+++.+|+...+.. |+++.+++
T Consensus       202 y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~---~~--~~~~~~~~s~~~~~li~~~L~~dP~~-R~s~~e~l  275 (350)
T 4b9d_A          202 YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS---GS--FPPVSLHYSYDLRSLVSQLFKRNPRD-RPSVNSIL  275 (350)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH---TC--CCCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc---CC--CCCCCccCCHHHHHHHHHHccCChhH-CcCHHHHh
Confidence            35678999999999999999999876543221111000   00  00112234566899999999988877 67888887


Q ss_pred             H
Q psy7935         244 K  244 (260)
Q Consensus       244 ~  244 (260)
                      +
T Consensus       276 ~  276 (350)
T 4b9d_A          276 E  276 (350)
T ss_dssp             T
T ss_pred             c
Confidence            5

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=83.55  E-value=0.081  Score=43.62  Aligned_cols=147  Identities=11%  Similarity=0.101  Sum_probs=79.4

Q ss_pred             hhHHHhhccCcccccchHHHHHHHH--HHHHHHHHHhhh----CCceecCCCCCcEEEccCCcEEEEeeccc---ccc--
Q psy7935          92 QTLISNLDSQNITRENISDIIKLLS--IEIGTTLSVMHS----NNIIHGDLTTSNMILSSDHHLVMIDFGLS---QIK--  160 (260)
Q Consensus        92 ~~l~~~l~~~~~~~~~~~~~~~~i~--~~i~~~l~~LH~----~~i~H~dlkp~Nill~~~~~~kl~DFg~~---~~~--  160 (260)
                      ++|.+++....+....-...+..++  .+-+.....+|.    .||+-.  +-.++-|..-|.++..+-...   ...  
T Consensus       156 g~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~--~~g~vKl~DFGla~~~~~~~~~~~~~~GT  233 (346)
T 4fih_A          156 GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT--HDGRVKLSDFGFCAQVSKEVPRRKSLVGT  233 (346)
T ss_dssp             EEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC--TTCCEEECCCTTCEECCSSSCCBCCCCSC
T ss_pred             CcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC--CCCCEEEecCcCceecCCCCCcccccccC
Confidence            4466666655553333333333333  334444566773    355432  123566666565554432211   111  


Q ss_pred             ----------cccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhh
Q psy7935         161 ----------VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSS  230 (260)
Q Consensus       161 ----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~  230 (260)
                                ....+..+|+|++|..++.++++.++|............   .-+.....-.....+.++.+++.+|+..
T Consensus       234 p~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i---~~~~~~~~~~~~~~s~~~~dli~~~L~~  310 (346)
T 4fih_A          234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKNLHKVSPSLKGFLDRLLVR  310 (346)
T ss_dssp             GGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---HHSSCCCCSCGGGSCHHHHHHHHHHSCS
T ss_pred             cCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHH---HcCCCCCCCccccCCHHHHHHHHHHcCC
Confidence                      122356789999999999999999998654321111000   0000000001122346689999999997


Q ss_pred             ccccCCccHHHHHH
Q psy7935         231 YRRQNRKQFETVMK  244 (260)
Q Consensus       231 ~~~~~~~~~~~il~  244 (260)
                      .+.. |+++.|+++
T Consensus       311 dP~~-R~ta~e~l~  323 (346)
T 4fih_A          311 DPAQ-RATAAELLK  323 (346)
T ss_dssp             STTT-SCCHHHHTT
T ss_pred             ChhH-CcCHHHHhc
Confidence            7776 678888765

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=81.30  E-value=1.3  Score=33.76  Aligned_cols=55  Identities=9%  Similarity=0.055  Sum_probs=41.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         106 ENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       106 ~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++....++++.+++.... -|...-+|--|.|+|++++.++.+++.=.|+-..++
T Consensus        81 ~~~~~eKlrll~nl~~L~~-~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~~~lp  135 (219)
T 4ano_A           81 KTTLLSRIRAAIHLVSKVK-HHSARRLIFIVCPENLMFNRALEPFFLHVGVKESLP  135 (219)
T ss_dssp             TSCHHHHHHHHHHHHHHHS-SCCSSSEECCCCGGGEEECTTCCEEESCCEETTTBS
T ss_pred             hcCHHHHHHHHHHHHHHHH-HhhhCceeEEEeCceEEEeCCCcEEEEEcCCcccCC
Confidence            3667777778888777555 123456788899999999999999999999865543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=80.76  E-value=0.17  Score=40.00  Aligned_cols=25  Identities=8%  Similarity=0.068  Sum_probs=20.5

Q ss_pred             cccccccccccceeeeee-eeeecCc
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSK  189 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~  189 (260)
                      +..+|+|++|..++.+.+ +..+|..
T Consensus       191 ~~~~Di~slG~il~ellt~g~~p~~~  216 (287)
T 1u59_A          191 SSRSDVWSYGVTMWEALSYGQKPYKK  216 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCccc
Confidence            457899999999999886 7777754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	260
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-10
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-09
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-09
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-08
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-08
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	8e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-07
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-07
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	8e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-06
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-06
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-06
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-06
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-06
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	7e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-05
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-05
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-05
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	8e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-04
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-04
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-04
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	0.001
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.001
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.001
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.002

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.9 bits (137), Expect = 3e-10
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 10/143 (6%)

Query: 33  FKTEYLGRSVLVKERFS-KKYRHPKLDEALTKERITSEIRGLMKC------RMADICLDD 85
           F   Y  R V   E  + KK  +         + I  E+R L K       +     L +
Sbjct: 28  FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87

Query: 86  VQKSAIQTLISN--LDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMI 142
                +         D   + ++ +    I  ++      L+ +HS+N+IH D+   N++
Sbjct: 88  HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNIL 147

Query: 143 LSSDHHLVMIDFGLSQIKVSTED 165
           LS    + + DFG + I      
Sbjct: 148 LSEPGLVKLGDFGSASIMAPANS 170

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (134), Expect = 8e-10
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 6/145 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
           +G  G ++          + +K  F  +     ++  L +E  I S +R     R+    
Sbjct: 16  KGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF 75

Query: 83  LDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            D  +   I             ++              E+   LS  HS  +IH D+   
Sbjct: 76  HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPE 135

Query: 140 NMILSSDHHLVMIDFGLSQIKVSTE 164
           N++L S   L + DFG S    S+ 
Sbjct: 136 NLLLGSAGELKIADFGWSVHAPSSR 160

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (131), Expect = 2e-09
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 12/145 (8%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMADICLDDV 86
           F   Y  ++       + K    K +E L  E    EI  L  C      ++ D    + 
Sbjct: 25  FGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPNIVKLLDAFYYEN 82

Query: 87  QKSAIQTLISNLDSQNITRENIS----DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMI 142
               +    +      +  E         I+++  +    L+ +H N IIH DL   N++
Sbjct: 83  NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNIL 142

Query: 143 LSSDHHLVMIDFGLSQIKVSTEDKA 167
            + D  + + DFG+S     T  + 
Sbjct: 143 FTLDGDIKLADFGVSAKNTRTIQRR 167

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 6e-09
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 18/143 (12%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
           QGA G ++    +  G+ V +++          L +   KE I +EI  + +        
Sbjct: 30  QGASGTVYTAMDVATGQEVAIRQM--------NLQQQPKKELIINEILVMRENKNPNIVN 81

Query: 78  MADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHGD 135
             D  L   +   +   ++     ++  E   D  ++ ++  E    L  +HSN +IH D
Sbjct: 82  YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRD 141

Query: 136 LTTSNMILSSDHHLVMIDFGLSQ 158
           + + N++L  D  + + DFG   
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCA 164

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 8e-09
 Identities = 23/135 (17%), Positives = 54/135 (40%), Gaps = 11/135 (8%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMADICLDDV 86
               +           ++K  H ++  A+ + +I  E++ L +C              D 
Sbjct: 19  GGVVFKVSHKPSGLVMARKLIHLEIKPAI-RNQIIRELQVLHECNSPYIVGFYGAFYSDG 77

Query: 87  QKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMI 142
           + S     +       + ++       I+  +SI +   L+ +   + I+H D+  SN++
Sbjct: 78  EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137

Query: 143 LSSDHHLVMIDFGLS 157
           ++S   + + DFG+S
Sbjct: 138 VNSRGEIKLCDFGVS 152

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 2e-08
 Identities = 29/155 (18%), Positives = 63/155 (40%), Gaps = 24/155 (15%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMA 79
           +G  G +   +Y G  V VK           +    T +   +E   + +       ++ 
Sbjct: 17  KGEFGDVMLGDYRGNKVAVK----------CIKNDATAQAFLAEASVMTQLRHSNLVQLL 66

Query: 80  DICLDDVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNII 132
            + +++     I        +L+  L S+  +      ++K   +++   +  +  NN +
Sbjct: 67  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS-LDVCEAMEYLEGNNFV 125

Query: 133 HGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           H DL   N+++S D+   + DFGL++   ST+D  
Sbjct: 126 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 160

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 3e-08
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 6/148 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKE-RFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC 82
           +G+   +     L   R   +K        +  K+     +  + S +      ++    
Sbjct: 18  EGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF 77

Query: 83  LDDVQKSAIQTLISN--LDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            DD +     +   N  L        +      +  + EI + L  +H   IIH DL   
Sbjct: 78  QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 137

Query: 140 NMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           N++L+ D H+ + DFG +++      +A
Sbjct: 138 NILLNEDMHIQITDFGTAKVLSPESKQA 165

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.5 bits (120), Expect = 5e-08
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 6/138 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
            G+ GR+        GR   +K    +     K  E    E  + S +      RM    
Sbjct: 14  TGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF 73

Query: 83  LDDVQKSAIQTLISN---LDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            D  Q   I   I           ++   + + K  + E+   L  +HS +II+ DL   
Sbjct: 74  QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPE 133

Query: 140 NMILSSDHHLVMIDFGLS 157
           N++L  + H+ + DFG +
Sbjct: 134 NILLDKNGHIKITDFGFA 151

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 49.7 bits (118), Expect = 8e-08
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 13/145 (8%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKE-RFSKKYRHPKLDEALTKERITSEIRGLMKC------ 76
           +G    + +  +    +   VK    +        +    +E    E+  L K       
Sbjct: 13  RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 72

Query: 77  -RMADICLDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNII 132
            ++ D    +     +  L+   +  +   E ++      + +   +   +  +H  NI+
Sbjct: 73  IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIV 132

Query: 133 HGDLTTSNMILSSDHHLVMIDFGLS 157
           H DL   N++L  D ++ + DFG S
Sbjct: 133 HRDLKPENILLDDDMNIKLTDFGFS 157

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 8e-08
 Identities = 33/149 (22%), Positives = 62/149 (41%), Gaps = 16/149 (10%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD 84
            G+ G ++K +     V VK   +     P+       +   +E+  L K R  +I    
Sbjct: 18  SGSFGTVYKGK-WHGDVAVK-MLNVTAPTPQ-----QLQAFKNEVGVLRKTRHVNILLFM 70

Query: 85  DVQKSAIQTLI------SNLDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHGDL 136
               +    ++      S+L       E   ++IKL+ I  +    +  +H+ +IIH DL
Sbjct: 71  GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTED 165
            ++N+ L  D  + + DFGL+ +K     
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSG 159

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (116), Expect = 2e-07
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 13/147 (8%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
           QG  G +FK  +   G+ V +K+   +  +      AL + +I   ++      + +IC 
Sbjct: 20  QGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICR 79

Query: 84  DDVQKSAIQTLISNL-----------DSQNITRENISDIIKLLSIEIGTTLSVMHSNNII 132
                         L              N+  +     IK +   +   L  +H N I+
Sbjct: 80  TKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKIL 139

Query: 133 HGDLTTSNMILSSDHHLVMIDFGLSQI 159
           H D+  +N++++ D  L + DFGL++ 
Sbjct: 140 HRDMKAANVLITRDGVLKLADFGLARA 166

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 2e-07
 Identities = 21/148 (14%), Positives = 47/148 (31%), Gaps = 6/148 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
           +GA G +          +V VK     K      +    +  I   +      +      
Sbjct: 15  EGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR 73

Query: 84  DDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN 140
           +   +       S  +  +    +I       +    ++   +  +H   I H D+   N
Sbjct: 74  EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 133

Query: 141 MILSSDHHLVMIDFGLSQIKVSTEDKAV 168
           ++L    +L + DFGL+ +      + +
Sbjct: 134 LLLDERDNLKISDFGLATVFRYNNRERL 161

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 9/141 (6%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC----RMA 79
           +G  G ++       G+   +K    K+ +  + +     ERI   +     C     M+
Sbjct: 14  RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 73

Query: 80  DICLDDVQKSAIQTLISNLDSQNITREN---ISDIIKLLSIEIGTTLSVMHSNNIIHGDL 136
                  + S I  L++  D      ++       ++  + EI   L  MH+  +++ DL
Sbjct: 74  YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDL 133

Query: 137 TTSNMILSSDHHLVMIDFGLS 157
             +N++L    H+ + D GL+
Sbjct: 134 KPANILLDEHGHVRISDLGLA 154

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 5e-07
 Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD 84
            G+ G + + E+   S        K  +   L +    +    E+  +      ++  L 
Sbjct: 18  DGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLY 77

Query: 85  DVQKSAIQTLI-------SNLDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDL 136
            V  +    ++       S LD     + +     +   ++++   +  + S   IH DL
Sbjct: 78  GVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV 168
              N++L++   + + DFGL +     +D  V
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 6e-07
 Identities = 26/155 (16%), Positives = 56/155 (36%), Gaps = 12/155 (7%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
           +G+   ++K         V   E   +K    +      +  +   ++     R  D   
Sbjct: 19  RGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWE 78

Query: 84  DDVQKSAIQTLI------SNLDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNN--IIHG 134
             V+      L+        L +     + +   +++    +I   L  +H+    IIH 
Sbjct: 79  STVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR 138

Query: 135 DLTTSNMILSSDH-HLVMIDFGLSQIKVSTEDKAV 168
           DL   N+ ++     + + D GL+ +K ++  KAV
Sbjct: 139 DLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV 173

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.1 bits (111), Expect = 8e-07
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 6/144 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
            G+ GR+   ++   G    +K    +K    K  E    E RI   +      ++    
Sbjct: 51  TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110

Query: 83  LDDVQKSAIQT--LISNLDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            D+     +        + S        S    +  + +I  T   +HS ++I+ DL   
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170

Query: 140 NMILSSDHHLVMIDFGLSQIKVST 163
           N+++    ++ + DFG ++     
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVKGR 194

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 15/100 (15%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 69  EIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS 128
           ++   ++ +      D+++    + L    D   +T E++         ++   +  +  
Sbjct: 127 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY----QVAKGMEFLEF 182

Query: 129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAV 168
            + +H DL   N++++    + + DFGL++  +S  +  V
Sbjct: 183 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 222

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 22/146 (15%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
            GA G + +      G +   K         P   +   KE +  EI+ +          
Sbjct: 36  TGAFGVVHRVTERATGNNFAAK-----FVMTPHESD---KETVRKEIQTMSVLRHPTLVN 87

Query: 78  MADICLDDVQKSAIQTLISNLD-SQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIH 133
           + D   DD +   I   +S  +  + +  E+     D       ++   L  MH NN +H
Sbjct: 88  LHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 147

Query: 134 GDLTTSNMILSSDH--HLVMIDFGLS 157
            DL   N++ ++     L +IDFGL+
Sbjct: 148 LDLKPENIMFTTKRSNELKLIDFGLT 173

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.0 bits (108), Expect = 2e-06
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 17/153 (11%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
           +GA G +           V +K + S           L + +I    R      + DI  
Sbjct: 18  EGAYGMVCSAYDNVNKVRVAIK-KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIR 76

Query: 84  DDVQKSAIQTLISN----------LDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIH 133
               +      +            L +Q+++ ++I   +     +I   L  +HS N++H
Sbjct: 77  APTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY----QILRGLKYIHSANVLH 132

Query: 134 GDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
            DL  SN++L++   L + DFGL+++     D 
Sbjct: 133 RDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 165

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 15/137 (10%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMADICLDDV 86
           F   +       K+ +  K+   K  +   +  +  EI  L          + +      
Sbjct: 18  FGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRNILHLHESFESME 74

Query: 87  QKSAIQTLISNLDSQNITRENISDI----IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMI 142
           +   I   IS LD       +  ++    I     ++   L  +HS+NI H D+   N+I
Sbjct: 75  ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134

Query: 143 LSSDH--HLVMIDFGLS 157
             +     + +I+FG +
Sbjct: 135 YQTRRSSTIKIIEFGQA 151

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 26/147 (17%), Positives = 58/147 (39%), Gaps = 7/147 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
           +G  G +FK +       V +K R         +  +  +E  +  E++     R+ D+ 
Sbjct: 12  EGTYGTVFKAKNRETHEIVALK-RVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL 70

Query: 83  LDDVQKSAIQ---TLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
             D + + +             +   +   +I+K    ++   L   HS N++H DL   
Sbjct: 71  HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQ 130

Query: 140 NMILSSDHHLVMIDFGLSQIKVSTEDK 166
           N++++ +  L + +FGL++        
Sbjct: 131 NLLINRNGELKLANFGLARAFGIPVRC 157

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 3e-06
 Identities = 21/153 (13%), Positives = 57/153 (37%), Gaps = 20/153 (13%)

Query: 26  QGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RM 78
           QG  G ++   +     V +K               ++ E    E + + K       ++
Sbjct: 27  QGCFGEVWMGTWNGTTRVAIK-TLKP--------GTMSPEAFLQEAQVMKKLRHEKLVQL 77

Query: 79  ADICLDD----VQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHG 134
             +  ++    V +   +  + +       +      +  ++ +I + ++ +   N +H 
Sbjct: 78  YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 137

Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           DL  +N+++  +    + DFGL+++    E  A
Sbjct: 138 DLRAANILVGENLVCKVADFGLARLIEDNEYTA 170

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 22/145 (15%), Positives = 57/145 (39%), Gaps = 4/145 (2%)

Query: 26  QGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLD 84
           +G  G ++K +   G +  +K+   +K         + +  I  E++     ++ D+   
Sbjct: 12  EGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71

Query: 85  DVQKSAIQTLISNLDSQNITREN---ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNM 141
             +   +   +     + +        S   K   +++   ++  H   ++H DL   N+
Sbjct: 72  KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131

Query: 142 ILSSDHHLVMIDFGLSQIKVSTEDK 166
           +++ +  L + DFGL++       K
Sbjct: 132 LINREGELKIADFGLARAFGIPVRK 156

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 3e-06
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 31/173 (17%)

Query: 13  ASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRG 72
           A  +VLQ  E   +G  G +++ ++ G  V VK  FS +       EA        EI  
Sbjct: 2   ARTIVLQ--ESIGKGRFGEVWRGKWRGEEVAVK-IFSSREERSWFREA--------EIYQ 50

Query: 73  LMKCR------MADICLDDVQKSAIQTLISN----------LDSQNITRENIS----DII 112
            +  R             D        L+S+          L+   +T E +        
Sbjct: 51  TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTA 110

Query: 113 KLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
             L+      +       I H DL + N+++  +    + D GL+    S  D
Sbjct: 111 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 163

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.4 bits (104), Expect = 3e-06
 Identities = 21/141 (14%), Positives = 47/141 (33%), Gaps = 10/141 (7%)

Query: 26  QGAEGRIFK-TEYLGRSVLVK--------ERFSKKYRHPKLDEALTKERITSEIRGLMKC 76
           +G E  +F          +VK         +  K+ R             ++        
Sbjct: 10  EGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQ 69

Query: 77  RMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL 136
           ++  + +  V       ++  L           +    +   I   ++  +   I+HGDL
Sbjct: 70  KLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDL 129

Query: 137 TTSNMILSSDHHLVMIDFGLS 157
           +  N+++ S+  + +IDF  S
Sbjct: 130 SQYNVLV-SEEGIWIIDFPQS 149

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 44.7 bits (105), Expect = 5e-06
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 22/153 (14%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
            GA G + +      GR  + K               L K  + +EI  + +        
Sbjct: 39  SGAFGVVHRCVEKATGRVFVAKF--------INTPYPLDKYTVKNEISIMNQLHHPKLIN 90

Query: 78  MADICLDDVQKSAIQTLISNLD-SQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIH 133
           + D   D  +   I   +S  +    I  E+       +     +    L  MH ++I+H
Sbjct: 91  LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVH 150

Query: 134 GDLTTSNMILSSDH--HLVMIDFGLSQIKVSTE 164
            D+   N++  +     + +IDFGL+      E
Sbjct: 151 LDIKPENIMCETKKASSVKIIDFGLATKLNPDE 183

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 6e-06
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 6/148 (4%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKE-RFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC 82
           +G  G++        GR   +K  R        ++   +T+ R+    R      +    
Sbjct: 15  KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF 74

Query: 83  LDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
               +   +    +  +             +  +    EI + L  +HS ++++ D+   
Sbjct: 75  QTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLE 134

Query: 140 NMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           N++L  D H+ + DFGL +  +S     
Sbjct: 135 NLMLDKDGHIKITDFGLCKEGISDGATM 162

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 7e-06
 Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
            G+ GR  K      G+ ++ K             + L  E  +  E++     R  D  
Sbjct: 14  TGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRI 72

Query: 83  LDDVQKSAI--------QTLISNLDSQNITRENIS-DIIKLLSIEIGTTLSVMH-----S 128
           +D    +            L S +      R+ +  + +  +  ++   L   H      
Sbjct: 73  IDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGG 132

Query: 129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           + ++H DL  +N+ L    ++ + DFGL++I       A
Sbjct: 133 HTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 171

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 8e-06
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 17/149 (11%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------- 76
            G  G ++    +     V +K    +K R     E     R+  E+  L K        
Sbjct: 14  SGGFGSVYSGIRVSDNLPVAIKH--VEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71

Query: 77  -RMADICLDDVQKSAIQTLISN-LDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNI 131
            R+ D          I        D  +   E  +   ++ +    ++   +   H+  +
Sbjct: 72  IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV 131

Query: 132 IHGDLTTSNMILSSD-HHLVMIDFGLSQI 159
           +H D+   N+++  +   L +IDFG   +
Sbjct: 132 LHRDIKDENILIDLNRGELKLIDFGSGAL 160

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 9e-06
 Identities = 22/147 (14%), Positives = 56/147 (38%), Gaps = 8/147 (5%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
           +G  G ++K      G  V +K +         +     +E  +  E+      ++ D+ 
Sbjct: 12  EGTYGVVYKARNKLTGEVVALK-KIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI 70

Query: 83  LDDVQKSAIQTLISN----LDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTT 138
             + +   +   +          +        +IK    ++   L+  HS+ ++H DL  
Sbjct: 71  HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 130

Query: 139 SNMILSSDHHLVMIDFGLSQIKVSTED 165
            N++++++  + + DFGL++       
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVR 157

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD 84
            G  G + +  Y  R    +   + K      ++A   E +  E + + +     I  L 
Sbjct: 19  CGNFGSVRQGVYRMRKK--QIDVAIKVLKQGTEKAD-TEEMMREAQIMHQLDNPYIVRLI 75

Query: 85  DVQKSAIQTLI------SNLDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHGDL 136
            V ++    L+        L    + +     +  +  +  ++   +  +   N +H DL
Sbjct: 76  GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 135

Query: 137 TTSNMILSSDHHLVMIDFGLSQI 159
              N++L + H+  + DFGLS+ 
Sbjct: 136 AARNVLLVNRHYAKISDFGLSKA 158

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (101), Expect = 1e-05
 Identities = 34/236 (14%), Positives = 72/236 (30%), Gaps = 17/236 (7%)

Query: 26  QGAEGRIFK-----TEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD 80
            G  G +              V +K      Y   +  + L++  I  +        +  
Sbjct: 36  AGEFGEVCSGHLKLPGKREIFVAIK-TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEG 94

Query: 81  ICLDDVQKSAIQTLISN--LDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHGDL 136
           +         I   + N  LDS     +    +I+L+ +   I   +  +   N +H DL
Sbjct: 95  VVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDL 154

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYN 196
              N++++S+    + DFGLS+              L   +                 + 
Sbjct: 155 AARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK---FT 211

Query: 197 HHLVMIDFGLSQIKVSTEDK----AVDFRDMFNWILSSYRRQNRKQFETVMKTFAE 248
               +  +G+   +V +  +     +  +D+ N I   YR        + +     
Sbjct: 212 SASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLML 267

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 11/152 (7%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKL-DEALTKERITSEIRGLMKCR------- 77
            GA G++F    +      K    K  +   +  +A T E   +E + L   R       
Sbjct: 34  TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT 93

Query: 78  MADICLDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIHG 134
           +      + +   I   I+  +      +        +++   EI   L  +H   II+ 
Sbjct: 94  LHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYR 153

Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           D+   N++L S+ H+V+ DFGLS+  V+ E +
Sbjct: 154 DIKLENILLDSNGHVVLTDFGLSKEFVADETE 185

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 23/155 (14%), Positives = 56/155 (36%), Gaps = 28/155 (18%)

Query: 26  QGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RM 78
            G  G ++   Y     V VK    +         +++ +   +E   + +       R+
Sbjct: 23  AGQFGEVWMGYYNGHTKVAVK-SLKQ--------GSMSPDAFLAEANLMKQLQHQRLVRL 73

Query: 79  ADICLDD--------VQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNN 130
             +   +        ++  ++   +       +T   + D+      +I   ++ +   N
Sbjct: 74  YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA----QIAEGMAFIEERN 129

Query: 131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
            IH DL  +N+++S      + DFGL+++    E 
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 38/240 (15%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-------RMADICLDD 85
           +   +   ++   E+   K   P       K++I  EI+ L           +ADI  D 
Sbjct: 48  YSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP 102

Query: 86  VQKSA--IQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMIL 143
           V ++   +   ++N D + + +      I+    EI   L   HS  I+H D+   N+++
Sbjct: 103 VSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162

Query: 144 SSDHHLVMI-DFGLSQIKVSTE-----------------------DKAVDLYVLKRNLTT 179
             +H  + + D+GL++     +                       D ++D++ L   L +
Sbjct: 163 DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 222

Query: 180 IIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQF 239
           +I     +  G         +    G   +    +   ++    FN IL  + R+  ++F
Sbjct: 223 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERF 282

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-05
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 10/142 (7%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD 84
            G  G + K  Y  + V   +  + K    + ++   K+ + +E   + +     I  + 
Sbjct: 17  SGNFGTVKKGYYQMKKV--VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74

Query: 85  DVQKSAIQTLI------SNLDSQNITRENISD-IIKLLSIEIGTTLSVMHSNNIIHGDLT 137
            + ++    L+        L+       ++ D  I  L  ++   +  +  +N +H DL 
Sbjct: 75  GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLA 134

Query: 138 TSNMILSSDHHLVMIDFGLSQI 159
             N++L + H+  + DFGLS+ 
Sbjct: 135 ARNVLLVTQHYAKISDFGLSKA 156

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 11/53 (20%), Positives = 26/53 (49%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE 164
              ++ ++   ++ +     +H DL T N ++  +  + + DFGLS+   S +
Sbjct: 142 QLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 194

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 2e-05
 Identities = 21/144 (14%), Positives = 57/144 (39%), Gaps = 13/144 (9%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RMA 79
           +G  G + +  Y+           K  ++   D    +E+   E   + +       ++ 
Sbjct: 17  EGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV--REKFLQEALTMRQFDHPHIVKLI 74

Query: 80  DICLDD----VQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGD 135
            +  ++    + +      + +         +++ +I     ++ T L+ + S   +H D
Sbjct: 75  GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA-YQLSTALAYLESKRFVHRD 133

Query: 136 LTTSNMILSSDHHLVMIDFGLSQI 159
           +   N+++SS+  + + DFGLS+ 
Sbjct: 134 IAARNVLVSSNDCVKLGDFGLSRY 157

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 10/148 (6%)

Query: 26  QGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKE-RITSEIRGLMKCRMADIC 82
            GA+G +       L R+V +K + S+ +++    +   +E  +   +       + ++ 
Sbjct: 27  SGAQGIVCAAYDAVLDRNVAIK-KLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVF 85

Query: 83  L------DDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL 136
                  +      +  L+     Q I  E   + +  L  ++   +  +HS  IIH DL
Sbjct: 86  TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDL 145

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTE 164
             SN+++ SD  L ++DFGL++   ++ 
Sbjct: 146 KPSNIVVKSDCTLKILDFGLARTAGTSF 173

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 20/236 (8%)

Query: 26  QGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK------CRMA 79
            GA G ++K  ++     VK   + K            + I  E   +        CR+ 
Sbjct: 19  SGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK-ANKEILDEAYVMASVDNPHVCRLL 77

Query: 80  DICLDDVQKSAIQTLIS-NLDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHGDL 136
            ICL    +   Q +    L       ++      LL+   +I   ++ +    ++H DL
Sbjct: 78  GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL 137

Query: 137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYN 196
              N+++ +  H+ + DFGL+++  + E +    Y  +     I  +A        + Y 
Sbjct: 138 AARNVLVKTPQHVKITDFGLAKLLGAEEKE----YHAEGGKVPIKWMALESILH--RIYT 191

Query: 197 HHLVMIDFGLSQIKVSTEDK----AVDFRDMFNWILSSYRRQNRKQFETVMKTFAE 248
           H   +  +G++  ++ T        +   ++ + +    R          +     
Sbjct: 192 HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMV 247

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (98), Expect = 3e-05
 Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 22/155 (14%)

Query: 26  QGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
            G  G +++  +     +V VK    +        + +  E    E   + +       +
Sbjct: 27  GGQYGEVYEGVWKKYSLTVAVK-TLKE--------DTMEVEEFLKEAAVMKEIKHPNLVQ 77

Query: 78  MADICLDDVQKSAIQTLISNLDSQNITRENIS-----DIIKLLSIEIGTTLSVMHSNNII 132
           +  +C  +     I   ++  +  +  RE         ++  ++ +I + +  +   N I
Sbjct: 78  LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFI 137

Query: 133 HGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKA 167
           H DL   N ++  +H + + DFGLS++       A
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 41.7 bits (97), Expect = 4e-05
 Identities = 22/163 (13%), Positives = 63/163 (38%), Gaps = 13/163 (7%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
           +G+ G IF+   L   + V +K    ++   P+L +     ++ +   G+    +     
Sbjct: 15  EGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAPQLRDEYRTYKLLAGCTGI--PNVYYFGQ 71

Query: 84  DDVQKSAIQTLISNLDSQNITREN---ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN 140
           + +    +  L+       +           + + + ++   +  +H  ++++ D+   N
Sbjct: 72  EGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN 131

Query: 141 MILSS-----DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLT 178
            ++        + + ++DFG+ +       K    Y  K+NL+
Sbjct: 132 FLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLS 174

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 24/152 (15%), Positives = 58/152 (38%), Gaps = 20/152 (13%)

Query: 26  QGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RM 78
            G  G +    +L    V +K    +         A+++E    E   +MK       ++
Sbjct: 15  SGQFGLVHLGYWLNKDKVAIK-TIRE--------GAMSEEDFIEEAEVMMKLSHPKLVQL 65

Query: 79  ADICLDDVQKSAIQTLISN--LDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHG 134
             +CL+      +   + +  L     T+  +     LL +  ++   ++ +    +IH 
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125

Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL   N ++  +  + + DFG+++  +  +  
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYT 157

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 5e-05
 Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 14/152 (9%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------R 77
           +G    ++K       + V +K +    +R    D          EI+ L +        
Sbjct: 8   EGQFATVYKARDKNTNQIVAIK-KIKLGHRSEAKDGI--NRTALREIKLLQELSHPNIIG 64

Query: 78  MADICLDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIHG 134
           + D        S +   +       I   ++      IK   +     L  +H + I+H 
Sbjct: 65  LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 124

Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
           DL  +N++L  +  L + DFGL++   S    
Sbjct: 125 DLKPNNLLLDENGVLKLADFGLAKSFGSPNRA 156

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 7e-05
 Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 17/163 (10%)

Query: 20  PAECFK------QGAEGRIFK------TEYLGRSVLVKERFSKKYRHPKLDEALTKERIT 67
              C         G  G ++K      +      V +K      Y   +  + L +  I 
Sbjct: 5   HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIK-TLKAGYTEKQRVDFLGEAGIM 63

Query: 68  SEIRGLMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDI----IKLLSIEIGTTL 123
            +       R+  +         I   + N       RE   +     +  +   I   +
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123

Query: 124 SVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
             + + N +H DL   N++++S+    + DFGLS++     + 
Sbjct: 124 KYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 166

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 8e-05
 Identities = 23/150 (15%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 26  QGAEGRIFKTEY-LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------RM 78
            G  G +   ++     V +K    +         +++++    E + +M        ++
Sbjct: 14  TGQFGVVKYGKWRGQYDVAIK-MIKE--------GSMSEDEFIEEAKVMMNLSHEKLVQL 64

Query: 79  ADICLDDVQKSAIQTLISN--LDSQNITRENISDIIKLLSI--EIGTTLSVMHSNNIIHG 134
             +C        I   ++N  L +      +     +LL +  ++   +  + S   +H 
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124

Query: 135 DLTTSNMILSSDHHLVMIDFGLSQIKVSTE 164
           DL   N +++    + + DFGLS+  +  E
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 30  GRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICLDDVQKS 89
           G +   +       VK   ++     ++ + LT+  I  +        +  ICL      
Sbjct: 46  GTLLDNDGKKIHCAVK-SLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 104

Query: 90  AIQTLI---SNLDSQNITRENISDIIKLLSIEIGTT--LSVMHSNNIIHGDLTTSNMILS 144
            +        +L +      +   +  L+   +     +  + S   +H DL   N +L 
Sbjct: 105 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 164

Query: 145 SDHHLVMIDFGLSQIKVSTEDKAV 168
               + + DFGL++     E  +V
Sbjct: 165 EKFTVKVADFGLARDMYDKEFDSV 188

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 1e-04
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 17/153 (11%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC------- 76
           +G+ G++F  E+    +   +K       +   +      E    E R L          
Sbjct: 12  KGSFGKVFLAEFKKTNQFFAIK-----ALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 66

Query: 77  RMADICLDDVQKSAIQTLISNLDSQNITRENIS---DIIKLLSIEIGTTLSVMHSNNIIH 133
            M            +   ++  D     +             + EI   L  +HS  I++
Sbjct: 67  HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVY 126

Query: 134 GDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK 166
            DL   N++L  D H+ + DFG+ +  +  + K
Sbjct: 127 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAK 159

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 13/139 (9%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADI----------- 81
           + +           R + K         +  +R   E+R L   +  ++           
Sbjct: 31  YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 90

Query: 82  CLDDVQKSAIQTLISNLDSQNITREN--ISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            L++     + T +   D  NI +      D ++ L  +I   L  +HS +IIH DL  S
Sbjct: 91  SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPS 150

Query: 140 NMILSSDHHLVMIDFGLSQ 158
           N+ ++ D  L ++DFGL++
Sbjct: 151 NLAVNEDCELKILDFGLAR 169

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 22/142 (15%), Positives = 48/142 (33%), Gaps = 7/142 (4%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVD 169
           + +   S ++   ++ + S N IH DL   N++L+      + DFGL++   +  +  V 
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

Query: 170 LYVLKRNLTTIIVVAYCWSKG---TLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNW 226
                     +  +A         T +S      +  + L  +  S           +  
Sbjct: 205 GNA----RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260

Query: 227 ILSSYRRQNRKQFETVMKTFAE 248
           I   +R  + +     M    +
Sbjct: 261 IKEGFRMLSPEHAPAEMYDIMK 282

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           +   + ++   +  +     IH DL   N+++  ++   + DFGLS+ 
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRG 176

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 3e-04
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 110 DIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFGLSQIKVSTE 164
             +KL   ++  +L+ +HS  I H D+   N++L  D   L + DFG ++  V  E
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 4e-04
 Identities = 26/168 (15%), Positives = 58/168 (34%), Gaps = 29/168 (17%)

Query: 26  QGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRG------ 72
           +GA G++ + +          R+V VK    +   H +    +++ +I   I        
Sbjct: 23  RGAFGQVIEADAFGIDKTATCRTVAVK-MLKEGATHSEHRALMSELKILIHIGHHLNVVN 81

Query: 73  -------------LMKCRMADICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSI-- 117
                        ++        L    +S     +    +     ++   +  L+    
Sbjct: 82  LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 141

Query: 118 EIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
           ++   +  + S   IH DL   N++LS  + + + DFGL++      D
Sbjct: 142 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 189

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 15/149 (10%)

Query: 26  QGAEGRIFK---TEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMK---CRMA 79
           +GA G++FK    +  GR V +K    +          + +  +   +         R+ 
Sbjct: 17  EGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 76

Query: 80  DICLDDVQKSAIQTLI-------SNLDSQNITRENISDIIKLLSIEIGTT--LSVMHSNN 130
           D+C         +  +             +   E       +  +       L  +HS+ 
Sbjct: 77  DVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR 136

Query: 131 IIHGDLTTSNMILSSDHHLVMIDFGLSQI 159
           ++H DL   N++++S   + + DFGL++I
Sbjct: 137 VVHRDLKPQNILVTSSGQIKLADFGLARI 165

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 13/139 (9%)

Query: 33  FKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC---------- 82
           +             + + K  +      L  +R   E+R L   R  ++           
Sbjct: 31  YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE 90

Query: 83  -LDDVQKSAIQT-LISNLDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            LDD     +    +     + +  E +  D I+ L  ++   L  +H+  IIH DL   
Sbjct: 91  TLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPG 150

Query: 140 NMILSSDHHLVMIDFGLSQ 158
           N+ ++ D  L ++DFGL++
Sbjct: 151 NLAVNEDCELKILDFGLAR 169

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 0.001
 Identities = 31/249 (12%), Positives = 86/249 (34%), Gaps = 35/249 (14%)

Query: 26  QGAEGRIFK-------TEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM 78
           QG+ G +++        +     V +K   ++     +  E L +  +  E       R+
Sbjct: 30  QGSFGMVYEGVAKGVVKDEPETRVAIK-TVNEAASMRERIEFLNEASVMKEFNCHHVVRL 88

Query: 79  ADICLDDVQKSAIQTLISNLDSQNITRENISDI-------------IKLLSIEIGTTLSV 125
             +         I  L++  D ++  R     +             +  ++ EI   ++ 
Sbjct: 89  LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 148

Query: 126 MHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY 185
           +++N  +H DL   N +++ D  + + DFG+++    T+          R     ++   
Sbjct: 149 LNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY--------YRKGGKGLLPVR 200

Query: 186 CWSKGTLQS--YNHHLVMIDFGLSQIKVSTEDK----AVDFRDMFNWILSSYRRQNRKQF 239
             S  +L+   +  +  +  FG+   +++T  +     +    +  +++           
Sbjct: 201 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 260

Query: 240 ETVMKTFAE 248
             ++     
Sbjct: 261 PDMLFELMR 269

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 81  ICLDDVQKSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSN 140
           I ++ +    + + I +   Q  T    S+I+K     IG  +  +HS NI H D+   N
Sbjct: 86  IVMECLDGGELFSRIQDRGDQAFTEREASEIMK----SIGEAIQYLHSINIAHRDVKPEN 141

Query: 141 MILSS---DHHLVMIDFGLSQIKVSTE 164
           ++ +S   +  L + DFG ++   S  
Sbjct: 142 LLYTSKRPNAILKLTDFGFAKETTSHN 168

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 20/174 (11%)

Query: 2   SHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDE 59
           SH+S ++++ E    +L        G    +     L   R V VK   +   R P    
Sbjct: 3   SHLSDRYELGE----ILG------FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL 52

Query: 60  ALTKE-RITSEIRGLMKCRMADICLDDVQKSAIQTLI------SNLDSQNITRENIS-DI 111
              +E +  + +       + D    +     +  ++        L     T   ++   
Sbjct: 53  RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 112

Query: 112 IKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTED 165
              +  +    L+  H N IIH D+  +N+++S+ + + ++DFG+++    + +
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 166

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 13/162 (8%)

Query: 26  QGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADICL 83
            G+ G I+    +  G  V +K    K     K  +   + +I   ++G +       C 
Sbjct: 17  SGSFGDIYLGTDIAAGEEVAIKLECVKT----KHPQLHIESKIYKMMQGGVGIPTIRWCG 72

Query: 84  DDVQKSAIQTLI---SNLDSQNITRENIS-DIIKLLSIEIGTTLSVMHSNNIIHGDLTTS 139
            +   + +   +   S  D  N      S   + LL+ ++ + +  +HS N IH D+   
Sbjct: 73  AEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPD 132

Query: 140 NMILSS---DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLT 178
           N ++      + + +IDFGL++            Y   +NLT
Sbjct: 133 NFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 174

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	260
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.96
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.04
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.78
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.76
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.72
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.36
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.73
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	94.18
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	92.78
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	91.65
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	91.37
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	90.29
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	89.05
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	89.01
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	87.7
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	87.16
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	86.87
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	86.66
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	86.3
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	85.99
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	85.7
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	85.24
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	84.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	83.82
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	82.73
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	82.42
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	82.02
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	81.72
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	81.43
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	80.59
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	80.53

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-43  Score=283.29  Aligned_cols=191  Identities=19%  Similarity=0.242  Sum_probs=139.8

Q ss_pred             cccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---CCC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---DVQ   87 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---~~~   87 (260)
                      +...+.|++.+.||+|+||.||+|++++ .||||++........      ..+.+.+|++++++++||||+ ++   ...
T Consensus         4 ei~~~~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~   76 (276)
T d1uwha_           4 EIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQ------QLQAFKNEVGVLRKTRHVNILLFMGYSTAP   76 (276)
T ss_dssp             BCCTTCCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCCTT------HHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             ccccccEEEEEEEeeCCCcEEEEEEECC-EEEEEEEEcccCCHH------HHHHHHHHHHHHHhCCCCCEeeeeEEEecc
Confidence            4456778999999999999999998765 599998654332211      246799999999999999999 33   222


Q ss_pred             chhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccc
Q psy7935          88 KSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIK  160 (260)
Q Consensus        88 ~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~  160 (260)
                      ..++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+..
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~  154 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVK  154 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-
T ss_pred             EEEEEEecCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeec
Confidence            2222       6777777543  235889999999999999999999999999999999999999999999999999766


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......    ..    .+..++..+.+|+.+     ..++.++||||||+++||++||..|+.
T Consensus       155 ~~~~~~~----~~----~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~  210 (276)
T d1uwha_         155 SRWSGSH----QF----EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS  210 (276)
T ss_dssp             -------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             cccCCcc----cc----cccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCC
Confidence            4332111    00    111122223333332     347889999999999999999987743

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-43  Score=282.48  Aligned_cols=222  Identities=14%  Similarity=0.179  Sum_probs=169.8

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||+|++....     .......+.+.+|+.++++++||||+     +.+...
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHH-----ccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCE
Confidence            45888999999999999999984  8899999865432     12222356789999999999999999     333333


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                        ++.++||+.++.+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        81 --~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          81 --VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             --EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred             --EEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCC
Confidence              2334444444333      23589999999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---cc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~  234 (260)
                      ....            ...++..+.+|+.+  ..+++++|+||+|++++++++|..|+.   ..++...+.....   ..
T Consensus       159 ~~~~------------~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~  226 (263)
T d2j4za1         159 SRRT------------TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF  226 (263)
T ss_dssp             CCCE------------ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTT
T ss_pred             Cccc------------ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            3211            12233334445444  457899999999999999999999987   5666777666543   33


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .++.+.+++.+|.+.++..|..
T Consensus       227 ~s~~~~~li~~~L~~dp~~R~t  248 (263)
T d2j4za1         227 VTEGARDLISRLLKHNPSQRPM  248 (263)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCHHHHHHHHHHccCCHhHCcC
Confidence            4677899999999999999863

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-43  Score=283.80  Aligned_cols=224  Identities=17%  Similarity=0.258  Sum_probs=166.0

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cch
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKS   89 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~   89 (260)
                      .++|+.++.||+|+||.||+|++.  |+.||||++......        ..+.+.+|++++++++||||+ +++.  ...
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--------~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   90 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLVGD   90 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--------CHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--------HHHHHHHHHHHHHhCCCCCEeeEeEEEEECC
Confidence            457999999999999999999984  999999987543321        245789999999999999999 3322  112


Q ss_pred             hhhhHHHhhccCcc-----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          90 AIQTLISNLDSQNI-----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        90 ~~~~l~~~l~~~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      .++.++||+.+..+     ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus        91 ~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1          91 ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             EEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            23335555554443     2358999999999999999999999999999999999999999999999999998764432


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc------cc
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY------RR  233 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~  233 (260)
                      ...          ....++..+++|+..  ..+++++|+||+|++++++++|..|+.   ..+.+.......      +.
T Consensus       171 ~~~----------~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  240 (293)
T d1yhwa1         171 SKR----------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE  240 (293)
T ss_dssp             CCB----------CCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGG
T ss_pred             ccc----------cccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcc
Confidence            111          111222233444444  457899999999999999999998876   333333333322      12


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++.+|...++..|..
T Consensus       241 ~~s~~~~~li~~~L~~dP~~R~s  263 (293)
T d1yhwa1         241 KLSAIFRDFLNRCLDMDVEKRGS  263 (293)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             cCCHHHHHHHHHHccCChhHCcC
Confidence            23567789999999999988863

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-42  Score=282.26  Aligned_cols=221  Identities=16%  Similarity=0.208  Sum_probs=160.0

Q ss_pred             eeccccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935           9 KITEASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus         9 ~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      +-++...+.|++.+.||+|+||.||+|++.  |+.||||++.....         ..+.+.+|+.++++++||||+ +++
T Consensus        10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---------~~~~~~~E~~il~~l~HpnIv~~~~   80 (287)
T d1opja_          10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---------EVEEFLKEAAVMKEIKHPNLVQLLG   80 (287)
T ss_dssp             CTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---------hHHHHHHHHHHHHhCCCCCEecCCc
Confidence            334556677999999999999999999984  88999998643211         135789999999999999999 322


Q ss_pred             ----CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          86 ----VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        86 ----~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                          ....++       ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus        81 ~~~~~~~~~iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DF  159 (287)
T d1opja_          81 VCTREPPFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADF  159 (287)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred             cEeeCCeeEEEeecccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccc
Confidence                222222       56666654432 346889999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc-------------
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD-------------  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~-------------  219 (260)
                      |+|+..........         ....+...+.+|+..  ..+++++|+||||+++++++++..|+.             
T Consensus       160 G~a~~~~~~~~~~~---------~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~  230 (287)
T d1opja_         160 GLSRLMTGDTYTAH---------AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE  230 (287)
T ss_dssp             CCTTTCCSSSSEEE---------TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             cceeecCCCCceee---------ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh
Confidence            99987654322110         011122223345444  568899999999999999999765432             


Q ss_pred             --------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 --------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 --------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                    +.+++.+|+...|.. |+++.++++.|..+
T Consensus       231 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rps~~ei~~~L~~~  273 (287)
T d1opja_         231 KDYRMERPEGCPEKVYELMRACWQWNPSD-RPSFAEIHQAFETM  273 (287)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHT
T ss_pred             cCCCCCCCccchHHHHHHHHHHcCCCHhH-CcCHHHHHHHHHHH
Confidence                          345555555544444 35566665555544

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-43  Score=283.22  Aligned_cols=225  Identities=15%  Similarity=0.194  Sum_probs=160.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  |+.||||.+......      ....+.+.+|++++++++||||+ +    .+...
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   77 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT------EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN   77 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC------HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC---
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC------HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCC
Confidence            45889999999999999999984  889999987544322      11246789999999999999999 3    33333


Q ss_pred             hhhhhHHHhhccCcc----------cccchHHHHHHHHHHHHHHHHHhhhCC-----ceecCCCCCcEEEccCCcEEEEe
Q psy7935          89 SAIQTLISNLDSQNI----------TRENISDIIKLLSIEIGTTLSVMHSNN-----IIHGDLTTSNMILSSDHHLVMID  153 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~-----i~H~dlkp~Nill~~~~~~kl~D  153 (260)
                      ..++.++||+.++.+          ...+++..++.++.|++.||+|||+++     |+||||||+|||++.++.+||+|
T Consensus        78 ~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~D  157 (269)
T d2java1          78 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD  157 (269)
T ss_dssp             -CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECC
T ss_pred             CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEee
Confidence            333334444443332          345899999999999999999999976     99999999999999999999999


Q ss_pred             ecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHH
Q psy7935         154 FGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWIL  228 (260)
Q Consensus       154 Fg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~  228 (260)
                      ||+|+.........          .+..++..+.+|+.+  ..+++++||||+|++++++++|..|+.   ..++...+.
T Consensus       158 FG~a~~~~~~~~~~----------~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~  227 (269)
T d2java1         158 FGLARILNHDTSFA----------KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR  227 (269)
T ss_dssp             HHHHHHC---------------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccceeecccCCCcc----------ccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            99998764432211          111222233344444  458899999999999999999998876   566667766


Q ss_pred             hhcc----ccCCccHHHHHHHHHHhccccccc
Q psy7935         229 SSYR----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       229 ~~~~----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .+..    ...++.+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps  259 (269)
T d2java1         228 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPS  259 (269)
T ss_dssp             HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCCCCCCcccCHHHHHHHHHHcCCChhHCcC
Confidence            6543    234567899999999999999863

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=278.18  Aligned_cols=216  Identities=16%  Similarity=0.217  Sum_probs=153.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      +.|+..+.||+|+||.||+|++. ++.||||++.....         ..+.+.+|++++++++||||+ +++    ....
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~---------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~   75 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   75 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC---------cHHHHHHHHHHHHhcCCCCcccccceeccCCce
Confidence            45788999999999999999994 77899998643221         135789999999999999999 333    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++....
T Consensus        76 ~lv~E~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  153 (263)
T d1sm2a_          76 CLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD  153 (263)
T ss_dssp             EEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-------
T ss_pred             EEEEEecCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccC
Confidence            22       6666665443  34578888999999999999999999999999999999999999999999999977654


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc-----------------------
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA-----------------------  217 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~-----------------------  217 (260)
                      .......         ...++..+++|+.+  ..+++++|+||||+++||++|+..|                       
T Consensus       154 ~~~~~~~---------~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p  224 (263)
T d1sm2a_         154 DQYTSST---------GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP  224 (263)
T ss_dssp             --------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCC
T ss_pred             CCceeec---------ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCc
Confidence            3221110         11122223344433  5688999999999999999986433                       


Q ss_pred             ----ccHHHHHHHHHhhccccCCccHHHHHHHHHHhccc
Q psy7935         218 ----VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVELR  252 (260)
Q Consensus       218 ----~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~~  252 (260)
                          .++.+++.+|+...|.. ||++.++++.|+++...
T Consensus       225 ~~~~~~l~~li~~cl~~~p~~-Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         225 RLASTHVYQIMNHCWKERPED-RPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHccCCHhH-CcCHHHHHHHHHHHHhC
Confidence                22557777777766665 56788888888776543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-42  Score=284.67  Aligned_cols=224  Identities=14%  Similarity=0.178  Sum_probs=162.9

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      +...|+.++.||+|+||.||+|++  +|+.||||++......     .....+.+.+|++++++++||||+ +++.  ..
T Consensus        13 p~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-----~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~   87 (309)
T d1u5ra_          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE   87 (309)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSC-----HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             cHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhcc-----CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC
Confidence            445689999999999999999998  4889999987543321     222346799999999999999999 3332  12


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ..++.++||+.++.+      ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus        88 ~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          88 HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             CEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            223335555443322      34689999999999999999999999999999999999999999999999999976543


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc-----ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc-c
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-----QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR-R  233 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~  233 (260)
                      ...              ..++..+.+|+.+     ..++.++||||+|++++++++|..|+.   ..+.+..+..+.. .
T Consensus       168 ~~~--------------~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~  233 (309)
T d1u5ra_         168 ANS--------------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA  233 (309)
T ss_dssp             BCC--------------CCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC
T ss_pred             CCc--------------cccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            221              1111222233322     457889999999999999999998865   3444444444322 1


Q ss_pred             ----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ..++.+.+++.+|...++..|..
T Consensus       234 ~~~~~~s~~~~~li~~~L~~dP~~Rpt  260 (309)
T d1u5ra_         234 LQSGHWSEYFRNFVDSCLQKIPQDRPT  260 (309)
T ss_dssp             CSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred             CCCCCCCHHHHHHHHHHCcCChhHCcC
Confidence                22456678888888888877753

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-42  Score=279.96  Aligned_cols=223  Identities=13%  Similarity=0.079  Sum_probs=159.4

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  |+.||||++..+...  +     ..+.+.+|++++++++||||+ +++    ...
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~--~-----~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~   77 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--D-----CPENIKKEICINKMLNHENVVKFYGHRREGNI   77 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc--h-----HHHHHHHHHHHHHhCCCCCEeeEeeeeccCce
Confidence            35788899999999999999984  889999987543321  1     135688999999999999999 332    222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++..   ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        78 ~~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~  154 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFR  154 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECE
T ss_pred             eEEEEeccCCCcHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeec
Confidence            222       455555543   2368999999999999999999999999999999999999999999999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--cc-ccccceeEeecceeeeecccccccc----HHHHHHHHHhhc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QS-YNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSY---  231 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~---  231 (260)
                      .......        ..+..++..+.+|+.+  .. .+.++|+||+|++++++++|..|+.    ............   
T Consensus       155 ~~~~~~~--------~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~  226 (271)
T d1nvra_         155 YNNRERL--------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL  226 (271)
T ss_dssp             ETTEECC--------BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS
T ss_pred             cCCcccc--------ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC
Confidence            4322110        1122233334455544  22 4678999999999999999998875    122222222211   


Q ss_pred             --cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                        +...++.+.+++.+|...++..|..
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t  253 (271)
T d1nvra_         227 NPWKKIDSAPLALLHKILVENPSARIT  253 (271)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcC
Confidence              1223466678888888888888863

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=279.27  Aligned_cols=222  Identities=16%  Similarity=0.220  Sum_probs=164.4

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC------C
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV------Q   87 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~------~   87 (260)
                      +++..++||+|+||.||+|++.  +..||+|.+..+...      ....+.+.+|++++++++||||+ +++.      .
T Consensus        10 y~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~------~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   83 (270)
T d1t4ha_          10 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT------KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG   83 (270)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS
T ss_pred             EEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC------HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecccc
Confidence            3466678999999999999984  789999987654332      11246799999999999999999 4332      1


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCcEEEcc-CCcEEEEeecccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNN--IIHGDLTTSNMILSS-DHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~--i~H~dlkp~Nill~~-~~~~kl~DFg~~~  158 (260)
                      ...++.++||+.+..+      ...+++..+..++.|++.||+|||+++  |+||||||+|||++. ++.+||+|||+|+
T Consensus        84 ~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~  163 (270)
T d1t4ha_          84 KKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  163 (270)
T ss_dssp             CEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             CCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcce
Confidence            2223334444444333      235889999999999999999999998  999999999999974 7899999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc-ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhcc-
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL-QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYR-  232 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~-  232 (260)
                      ........            +..++..+.+|+.+ ..+++++||||+|++++++++|..|+.    ..++.+.+..+.. 
T Consensus       164 ~~~~~~~~------------~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~  231 (270)
T d1t4ha_         164 LKRASFAK------------AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP  231 (270)
T ss_dssp             GCCTTSBE------------ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC
T ss_pred             eccCCccC------------CcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC
Confidence            54332211            11222233344433 568999999999999999999999975    4566666665432 


Q ss_pred             ----ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ----RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ----~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ....+.+.+++.+|.+.++..|..
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~R~s  259 (270)
T d1t4ha_         232 ASFDKVAIPEVKEIIEGCIRQNKDERYS  259 (270)
T ss_dssp             GGGGGCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             cccCccCCHHHHHHHHHHccCCHhHCcC
Confidence                223567899999999999999873

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-42  Score=277.81  Aligned_cols=232  Identities=14%  Similarity=0.201  Sum_probs=157.4

Q ss_pred             CccccceeeccccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCC
Q psy7935           2 SHISKKFKITEASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMAD   80 (260)
Q Consensus         2 ~~~~~~~~i~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~   80 (260)
                      |.....++|   +.+.|++.+.||+|+||.||+|+++ +.+||||++.....         ..+.+.+|++++++++|||
T Consensus         2 p~~~~~wei---~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~---------~~~~~~~E~~~l~~l~Hpn   69 (272)
T d1qpca_           2 PWWEDEWEV---PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM---------SPDAFLAEANLMKQLQHQR   69 (272)
T ss_dssp             CTTTCTTBC---CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS---------CHHHHHHHHHHHHHCCCTT
T ss_pred             CCCCCCeec---CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC---------CHHHHHHHHHHHHhCCCCC
Confidence            333445544   4567899999999999999999996 67899998643221         1357999999999999999


Q ss_pred             eE-EeCC-CchhhhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEE
Q psy7935          81 IC-LDDV-QKSAIQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLV  150 (260)
Q Consensus        81 i~-~~~~-~~~~~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~k  150 (260)
                      |+ +++. ....++.+++|+.++.+        ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+|
T Consensus        70 Iv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~K  149 (272)
T d1qpca_          70 LVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK  149 (272)
T ss_dssp             BCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEE
T ss_pred             EeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeeccccee
Confidence            99 3322 11112234444444332        23488999999999999999999999999999999999999999999


Q ss_pred             EEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc----HHHHH
Q psy7935         151 MIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMF  224 (260)
Q Consensus       151 l~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~  224 (260)
                      |+|||+|+...........         ...++..+.+|+..  ..++.++||||||++++|++|+..|+.    ..+++
T Consensus       150 l~DFGla~~~~~~~~~~~~---------~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~  220 (272)
T d1qpca_         150 IADFGLARLIEDNEYTARE---------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI  220 (272)
T ss_dssp             ECCCTTCEECSSSCEECCT---------TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHH
T ss_pred             eccccceEEccCCcccccc---------ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999876543221111         01111123344433  568899999999999999999765432    33334


Q ss_pred             HHHHhhccc----cCCccHHHHHHHHHHhccccc
Q psy7935         225 NWILSSYRR----QNRKQFETVMKTFAEVELRGR  254 (260)
Q Consensus       225 ~~~~~~~~~----~~~~~~~~il~~l~~~~~~~r  254 (260)
                      +.+..+.+.    ..++.+.+++.+|.+.++..|
T Consensus       221 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~R  254 (272)
T d1qpca_         221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDR  254 (272)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHC
Confidence            443333221    122334445555554555444

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-42  Score=284.22  Aligned_cols=225  Identities=15%  Similarity=0.199  Sum_probs=173.2

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQ   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~   87 (260)
                      -+.|++++.||+|+||.||+|++  +|+.||||++..+..     ........+.+|+.++++++||||+     +.+..
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhc-----cCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccc
Confidence            45688999999999999999998  489999998754321     1222346788999999999999999     33333


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++  +++|+.++.+      ...+++..++.++.|++.||+|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus        79 ~~~i--v~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~  156 (337)
T d1o6la_          79 RLCF--VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI  156 (337)
T ss_dssp             EEEE--EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred             cccc--ceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccc
Confidence            3333  4444444333      3368999999999999999999999999999999999999999999999999998654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---cc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---RR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~  233 (260)
                      ......          .+..++..+.+|+..  ..+++++|+||+||+++++++|..|+.   ..++++.+..+.   +.
T Consensus       157 ~~~~~~----------~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~  226 (337)
T d1o6la_         157 SDGATM----------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR  226 (337)
T ss_dssp             CTTCCB----------CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred             cCCccc----------ccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCc
Confidence            432211          123334444555554  558999999999999999999998876   666677766644   34


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++.+.+++.+|...++..|..
T Consensus       227 ~~s~~~~dli~~~L~~dP~~R~~  249 (337)
T d1o6la_         227 TLSPEAKSLLAGLLKKDPKQRLG  249 (337)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTT
T ss_pred             cCCHHHHHHHHhhccCCchhhcc
Confidence            45677899999999999999975

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-43  Score=282.59  Aligned_cols=226  Identities=15%  Similarity=0.143  Sum_probs=168.8

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++....     .......+.+.+|++++++++||||+     +.+...
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH-----IIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHH-----ccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCE
Confidence            45899999999999999999984  8899999865322     11222346789999999999999999     333333


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .+  .++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        83 ~~--ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_          83 LY--FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             EE--EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             EE--EEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            22  34444443322      23689999999999999999999999999999999999999999999999999987643


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---cc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQ  234 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~  234 (260)
                      .....        ...+..++..+++|+.+  ..++.++|+||+|++++++++|..|+.   ..++.+++..+..   ..
T Consensus       161 ~~~~~--------~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~  232 (288)
T d1uu3a_         161 ESKQA--------RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK  232 (288)
T ss_dssp             -----------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTT
T ss_pred             CCccc--------ccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCcc
Confidence            32111        01112233334455544  457899999999999999999999986   5666777766543   34


Q ss_pred             CCccHHHHHHHHHHhccccccc
Q psy7935         235 NRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       235 ~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .++.+.+++.+|...++..|..
T Consensus       233 ~s~~~~~li~~~L~~dP~~R~t  254 (288)
T d1uu3a_         233 FFPKARDLVEKLLVLDATKRLG  254 (288)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSTT
T ss_pred             CCHHHHHHHHHHccCCHhHCcC
Confidence            4677889999999999999974

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=282.27  Aligned_cols=229  Identities=19%  Similarity=0.211  Sum_probs=165.2

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cc
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QK   88 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~   88 (260)
                      +.++|++++.||+|+||.||+|++  +|+.||||++..+..   .     ..+.+.+|++++++++||||+ +++.  ..
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~   81 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE---E-----ELEDYMVEIDILASCDHPNIVKLLDAFYYE   81 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS---G-----GGGGTHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH---H-----HHHHHHHHHHHHHhCCCCCCCeEEEEEeeC
Confidence            456789999999999999999998  488999998754321   1     134688999999999999999 3332  11


Q ss_pred             hhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++.++||+.+..+       ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        82 ~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1          82 NNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred             CeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccC
Confidence            222234444443322       3458999999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecC-c--cccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWS-K--GTLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---  232 (260)
                      .......      ...+++.+.+|+.. .  .....+++++|+||+|++++++++|..|+.   ..+.+.++..+.+   
T Consensus       162 ~~~~~~~------~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~  235 (288)
T d2jfla1         162 RTIQRRD------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL  235 (288)
T ss_dssp             HHHHHHT------CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC
T ss_pred             CCccccc------ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            3221110      01112222222211 0  012457889999999999999999998876   4455555555432   


Q ss_pred             ---ccCCccHHHHHHHHHHhccccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                         ...++.+.+++++|...++..|..
T Consensus       236 ~~~~~~s~~~~~li~~~L~~dp~~R~t  262 (288)
T d2jfla1         236 AQPSRWSSNFKDFLKKCLEKNVDARWT  262 (288)
T ss_dssp             SSGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred             CccccCCHHHHHHHHHHccCChhHCcC
Confidence               233567789999999999888874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.7e-42  Score=285.28  Aligned_cols=220  Identities=15%  Similarity=0.177  Sum_probs=170.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  |+.||||++.....     ......+.+.+|+.+++.++||||+     +.+...
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~-----~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-----VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHc-----cCHHHHHHHHHHHHHHHHcCCCcEeecccccccccc
Confidence            56899999999999999999984  89999998653321     1222346789999999999999999     223222


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++       ++|.+++...   ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~---~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             cccccccccccchhhhHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecc
Confidence            222       5555555443   358999999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---c
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---R  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~  233 (260)
                      ...             .+..++..+++|+.+  ..+++++|+||+||+++++++|..|+.   ...++.++..+..   .
T Consensus       193 ~~~-------------~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~  259 (350)
T d1rdqe_         193 GRT-------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS  259 (350)
T ss_dssp             SCB-------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred             ccc-------------ccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCc
Confidence            321             112233334455544  457899999999999999999999976   5666676666543   3


Q ss_pred             cCCccHHHHHHHHHHhccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..++++.+++++|...++..|..
T Consensus       260 ~~s~~~~~li~~~L~~dP~kR~~  282 (350)
T d1rdqe_         260 HFSSDLKDLLRNLLQVDLTKRFG  282 (350)
T ss_dssp             TCCHHHHHHHHHHSCSCTTTCTT
T ss_pred             cCCHHHHHHHHHHhhhCHHhccc
Confidence            34678899999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-42  Score=282.76  Aligned_cols=184  Identities=20%  Similarity=0.279  Sum_probs=142.4

Q ss_pred             cccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..+.|++++.||+|+||.||+|++  +|+.||+|++.... . +.     ....+.+|+.++++++||||+     +.+.
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~-~~-----~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~   76 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-K-PA-----IRNQIIRELQVLHECNSPYIVGFYGAFYSD   76 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-C-TT-----HHHHHHHHGGGGGGCCCTTBCCEEEEEECS
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-C-HH-----HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            356789999999999999999998  48999999865432 1 11     246789999999999999999     3333


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+|+
T Consensus        77 ~~~~iVmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~  153 (322)
T d1s9ja_          77 GEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  153 (322)
T ss_dssp             SEEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             CEEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCcc
Confidence            33333       4555555432   358999999999999999999997 599999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......            .+..++..+.+|+.+  ..+++++||||+||+++++++|+.|+.
T Consensus       154 ~~~~~~~------------~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~  204 (322)
T d1s9ja_         154 QLIDSMA------------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIP  204 (322)
T ss_dssp             HHHHHTC---------------CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSS
T ss_pred             ccCCCcc------------ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence            6543211            122333344455544  468999999999999999999988863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.2e-42  Score=281.40  Aligned_cols=223  Identities=16%  Similarity=0.189  Sum_probs=170.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|++++.||+|+||.||+|++.  |+.||||++....     .......+.+.+|+.++++++||||+ +++.  ....
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI-----VVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHH-----ccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCe
Confidence            45888999999999999999984  8999999865332     11222346789999999999999999 3222  2223


Q ss_pred             hhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccc
Q psy7935          91 IQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTE  164 (260)
Q Consensus        91 ~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~  164 (260)
                      ++.+++|+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~  158 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT  158 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB
T ss_pred             eeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecccc
Confidence            3446666665443      3457888888999999999999999999999999999999999999999999997754332


Q ss_pred             cccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc---ccCC
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR---RQNR  236 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~  236 (260)
                      .             +..++..+.+|+.+  ..+++++|+||+|++++++++|..|+.   ..++..+++.+..   ...+
T Consensus       159 ~-------------~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s  225 (316)
T d1fota_         159 Y-------------TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN  225 (316)
T ss_dssp             C-------------CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred             c-------------cccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCC
Confidence            1             12223334445444  458899999999999999999999986   5667777766543   3345


Q ss_pred             ccHHHHHHHHHHhccccccc
Q psy7935         237 KQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       237 ~~~~~il~~l~~~~~~~r~~  256 (260)
                      +++.+++.+|...++..|..
T Consensus       226 ~~~~~li~~~L~~dp~~R~~  245 (316)
T d1fota_         226 EDVKDLLSRLITRDLSQRLG  245 (316)
T ss_dssp             HHHHHHHHHHTCSCTTTCTT
T ss_pred             HHHHHHHHHHhhhCHHhccc
Confidence            77899999999999988864

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-41  Score=277.32  Aligned_cols=223  Identities=16%  Similarity=0.162  Sum_probs=155.5

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~   85 (260)
                      ...+.|++.+.||+|+||.||+|++.  |+.||||++.......       ....+.+|+.++++++||||+     +.+
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-------~~~~~~~Ei~il~~l~HpnIv~l~~~~~~   78 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-------KEGSMENEIAVLHKIKHPNIVALDDIYES   78 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------------CHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh-------HHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence            34566899999999999999999984  8899999876543221       135688999999999999999     333


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeec
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFG  155 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg  155 (260)
                      ....++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||+..   ++.+||+|||
T Consensus        79 ~~~~~lvmE~~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG  155 (307)
T d1a06a_          79 GGHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG  155 (307)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTC---SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-
T ss_pred             CCEEEEEEeccCCCcHHHhhhcc---cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccc
Confidence            322222       4555555432   36899999999999999999999999999999999999953   7899999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      +|+........           .+..++..+++|+..  ..+++++|+||+|++++++++|..|+.   ..+....++.+
T Consensus       156 ~a~~~~~~~~~-----------~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  224 (307)
T d1a06a_         156 LSKMEDPGSVL-----------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA  224 (307)
T ss_dssp             ----------------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTT
T ss_pred             eeEEccCCCee-----------eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Confidence            99765433211           122233334455444  457899999999999999999999876   55666666664


Q ss_pred             ccc-------cCCccHHHHHHHHHHhccccccc
Q psy7935         231 YRR-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ...       ..++.+.+++.+|...++..|..
T Consensus       225 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s  257 (307)
T d1a06a_         225 EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT  257 (307)
T ss_dssp             CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCCCccccCCCHHHHHHHHHHccCCHhHCcC
Confidence            432       23456788888888888888863

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-41  Score=266.84  Aligned_cols=183  Identities=14%  Similarity=0.196  Sum_probs=137.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC----CCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD----VQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~----~~~~   89 (260)
                      +.|+..++||+|+||.||+|+++ +++||||++.....         ..+.+.+|+.++++++||||+ +++    ....
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~---------~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~   74 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI   74 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS---------CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC---------CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Confidence            45788999999999999999995 66899998754322         135689999999999999999 333    2222


Q ss_pred             hh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          90 AI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        90 ~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      ++       +++.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||+++++.+||+|||+++....
T Consensus        75 ~iv~Ey~~~g~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~  152 (258)
T d1k2pa_          75 FIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD  152 (258)
T ss_dssp             EEEEECCTTEEHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSS
T ss_pred             EEEEEccCCCcHHHhhhcc--ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccC
Confidence            22       4444443332  34578888999999999999999999999999999999999999999999999976554


Q ss_pred             cccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      .......         . ..+.+.| +|+..  ..++.++||||||++++|++| |+.|+.
T Consensus       153 ~~~~~~~---------~-~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~  203 (258)
T d1k2pa_         153 DEYTSSV---------G-SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE  203 (258)
T ss_dssp             SSCCCCC---------C-SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             CCceeec---------c-cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCC
Confidence            3222111         0 1222333 33333  568999999999999999998 666544

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.5e-41  Score=273.33  Aligned_cols=229  Identities=14%  Similarity=0.128  Sum_probs=156.4

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      .+.+.+.|++.+.||+|+||.||+|++.       ++.||||++....       .....+.+.+|++++++++||||+ 
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~il~~l~h~niv~   80 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDNPNIVK   80 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-------ChHHHHHHHHHHHHHHhcCCCCccc
Confidence            3556778999999999999999999974       3689999854321       111256799999999999999999 


Q ss_pred             E----eCCCchhh-------hhHHHhhccCcc---------------------cccchHHHHHHHHHHHHHHHHHhhhCC
Q psy7935          83 L----DDVQKSAI-------QTLISNLDSQNI---------------------TRENISDIIKLLSIEIGTTLSVMHSNN  130 (260)
Q Consensus        83 ~----~~~~~~~~-------~~l~~~l~~~~~---------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~  130 (260)
                      +    .......+       ++|.+++.....                     ...+++..+..++.|++.||+|||+++
T Consensus        81 ~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~  160 (301)
T d1lufa_          81 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK  160 (301)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC
Confidence            2    22222222       667777643211                     223788899999999999999999999


Q ss_pred             ceecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCc-ccc--ccccccceeEeecce
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSK-GTL--QSYNHHLVMIDFGLS  207 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~di~s~g~~  207 (260)
                      |+||||||+|||++.++.+||+|||+|+..........         .+...+.+.|.+ +..  ..+++++|+||||++
T Consensus       161 ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvv  231 (301)
T d1lufa_         161 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA---------DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV  231 (301)
T ss_dssp             CCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC-------------CCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             eEeeEEcccceEECCCCcEEEccchhheeccCCccccc---------cCCCCcCcCcCCHHHHccCCCChhhhhccchhh
Confidence            99999999999999999999999999976544322111         112223334433 333  568899999999999


Q ss_pred             eeeecccccc-cc---HHHHHHHHHhhccc----cCCccHHHHHHHHHHhcccccc
Q psy7935         208 QIKVSTEDKA-VD---FRDMFNWILSSYRR----QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       208 ~~~~~~~~~~-~~---~~~~~~~~~~~~~~----~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +||++++..| +.   ..++...+..+...    ..++++.+++.+|.+.++..|.
T Consensus       232 l~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RP  287 (301)
T d1lufa_         232 LWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRP  287 (301)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCc
Confidence            9999988643 22   33344444333221    1223444555555555554443

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-41  Score=272.64  Aligned_cols=231  Identities=15%  Similarity=0.145  Sum_probs=163.3

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----C
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----Q   87 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~   87 (260)
                      .++|++.+.||+|+||.||+|++  +|+.||||++.......+     ...+.+.+|++++++++||||+ +++.    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~-----~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP-----SFYLRFRREAQNAAALNHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCH-----HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCH-----HHHHHHHHHHHHHHhcCCCCCCcccceeeecc
Confidence            45688899999999999999998  499999998754433222     2356799999999999999999 3222    1


Q ss_pred             --chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          88 --KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        88 --~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                        ...++.++||+.+..+      ...+++..+..++.|++.||+|||++||+||||||+|||++.++..+++|||.+..
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  160 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred             CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhh
Confidence              1223345566555433      33589999999999999999999999999999999999999999999999999865


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc--
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR--  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~--  232 (260)
                      .........       ...+..++..+.+|+..  ..+++++||||+|+++++++||..|+.   ..+...+.+...+  
T Consensus       161 ~~~~~~~~~-------~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~  233 (277)
T d1o6ya_         161 IADSGNSVT-------QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP  233 (277)
T ss_dssp             CC-----------------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC
T ss_pred             hcccccccc-------ccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCC
Confidence            543322111       01122233334444444  458899999999999999999998876   3444444444322  


Q ss_pred             -----ccCCccHHHHHHHHHHhcccccccc
Q psy7935         233 -----RQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       233 -----~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                           ...++.+.+++.+|.+.++..|+.+
T Consensus       234 ~~~~~~~~s~~l~~li~~~L~~dp~~R~~s  263 (277)
T d1o6ya_         234 PSARHEGLSADLDAVVLKALAKNPENRYQT  263 (277)
T ss_dssp             GGGTSSSCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred             CchhccCCCHHHHHHHHHHccCCHhHCHhH
Confidence                 1224566778888877778777754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.3e-41  Score=280.00  Aligned_cols=222  Identities=16%  Similarity=0.126  Sum_probs=166.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC--Cchh
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV--QKSA   90 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~--~~~~   90 (260)
                      +.|++++.||+|+||.||+|++  +|+.||||++....     .   .....+.+|+.++++++||||+ +++.  ....
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----P---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYE  100 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----H---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc-----h---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            4589999999999999999998  48999999864321     1   1245788999999999999999 3222  1222


Q ss_pred             hhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc--cCCcEEEEeeccccccc
Q psy7935          91 IQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS--SDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        91 ~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~--~~~~~kl~DFg~~~~~~  161 (260)
                      ++.++||+.++.+       ...+++..++.++.|++.||+|||++||+||||||+|||++  .++.+||+|||+|+...
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecC
Confidence            2335555544332       23589999999999999999999999999999999999998  57899999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR---  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---  233 (260)
                      .....           .+..++..+++|+..  ..++.++|+||+||+++++++|..|+.   ..+.+..+..+...   
T Consensus       181 ~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~  249 (352)
T d1koba_         181 PDEIV-----------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE  249 (352)
T ss_dssp             TTSCE-----------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCS
T ss_pred             CCCce-----------eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence            43211           122223334444444  458899999999999999999999876   55666666654322   


Q ss_pred             ----cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ----QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ----~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                          ..++.+.+++.+|...++..|..
T Consensus       250 ~~~~~~s~~~~~li~~~L~~dp~~R~s  276 (352)
T d1koba_         250 DAFSSVSPEAKDFIKNLLQKEPRKRLT  276 (352)
T ss_dssp             STTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             ccccCCCHHHHHHHHHHccCChhHCcC
Confidence                23566788899998888888864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=271.73  Aligned_cols=227  Identities=13%  Similarity=0.128  Sum_probs=168.2

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..++|++.+.||+|+||.||+|++.  |+.||||++..........  ....+.+.+|+.++++++||||+     +.+.
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR--GVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhh--hHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3467899999999999999999984  8999999976554432221  11256799999999999999999     3333


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC----cEEEEeec
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH----HLVMIDFG  155 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~----~~kl~DFg  155 (260)
                      ...++       ++|.+++...   ..+++..++.++.|++.||+|||+++|+||||||+|||++.++    .+||+|||
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~---~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG  162 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG  162 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred             CEEEEEEEcCCCccccchhccc---cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchh
Confidence            33333       4555554432   3689999999999999999999999999999999999999865    59999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhh
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSS  230 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~  230 (260)
                      ++..........           +..++..+++|+..  ..++.++|+||+|++++++++|..|+.   ..+.+..+...
T Consensus       163 ~a~~~~~~~~~~-----------~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  231 (293)
T d1jksa_         163 LAHKIDFGNEFK-----------NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV  231 (293)
T ss_dssp             TCEECTTSCBCS-----------CCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT
T ss_pred             hhhhcCCCcccc-----------ccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence            997765432211           11222334444444  458899999999999999999999876   45555555554


Q ss_pred             cc-------ccCCccHHHHHHHHHHhccccccc
Q psy7935         231 YR-------RQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       231 ~~-------~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      ..       ...++.+.+++++|...++..|..
T Consensus       232 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s  264 (293)
T d1jksa_         232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT  264 (293)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             CCCCCchhcCCCCHHHHHHHHHHccCChhHCcC
Confidence            32       223456678888888888888863

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=269.55  Aligned_cols=185  Identities=15%  Similarity=0.176  Sum_probs=136.6

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-Ee---CC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LD---DV   86 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~---~~   86 (260)
                      +.+.+.|++.+.||+|+||.||+|+++ +++||||++.....         ..+.|.+|+.++++++||||+ ++   ..
T Consensus        13 ~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~---------~~~~~~~E~~~l~~l~h~nIv~~~g~~~~   83 (285)
T d1fmka3          13 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE   83 (285)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             EcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC---------CHHHHHHHHHHHHhcccCCEeEEEEEEec
Confidence            445678999999999999999999995 56899998643221         135799999999999999999 33   22


Q ss_pred             CchhhhhHHHhhccCcc--------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKSAIQTLISNLDSQNI--------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~~~~~l~~~l~~~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...+  .+++|+.++.+        .+.+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        84 ~~~~--lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~  161 (285)
T d1fmka3          84 EPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR  161 (285)
T ss_dssp             SSCE--EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred             CCeE--EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhh
Confidence            2222  34444444322        3458999999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA  217 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~  217 (260)
                      ..........          +...+.+ +++|+..  ..+++++||||||++++|++++..|
T Consensus       162 ~~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p  213 (285)
T d1fmka3         162 LIEDNEYTAR----------QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV  213 (285)
T ss_dssp             ------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             hccCCCceee----------ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCC
Confidence            7644322111          1112223 3344444  6789999999999999999997654

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.8e-40  Score=266.66  Aligned_cols=231  Identities=16%  Similarity=0.112  Sum_probs=170.7

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCch-hhHHHHHHHHHHHHhhhcccC-CCCeE-----EeCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPK-LDEALTKERITSEIRGLMKCR-MADIC-----LDDV   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~-~~~~~~~~~~~~e~~~l~~~~-h~~i~-----~~~~   86 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||||++......... .......+.+.+|+.++++++ ||||+     +.+.
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            4688899999999999999998  4899999997765543322 222334567899999999997 99998     3333


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...   ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cceEEEEEcCCCchHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeE
Confidence            33233       5666666443   3689999999999999999999999999999999999999999999999999987


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcc----ccccccccceeEeecceeeeecccccccc---HHHHHHHHHhhcc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKG----TLQSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYR  232 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~  232 (260)
                      .........       ..++..+.+|++..+    ....+++++|+||+|++++++++|..|+.   .......+..+..
T Consensus       160 ~~~~~~~~~-------~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~  232 (277)
T d1phka_         160 LDPGEKLRE-------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  232 (277)
T ss_dssp             CCTTCCBCC-------CCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             ccCCCceee-------eeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC
Confidence            654321110       111122222222110    11346889999999999999999999987   4555666665532


Q ss_pred             c-------cCCccHHHHHHHHHHhccccccc
Q psy7935         233 R-------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       233 ~-------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .       ..++.+.+++.+|...++..|..
T Consensus       233 ~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s  263 (277)
T d1phka_         233 QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT  263 (277)
T ss_dssp             CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC
T ss_pred             CCCCcccccCCHHHHHHHHHHccCChhHCcC
Confidence            2       23567789999999999999873

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=269.64  Aligned_cols=221  Identities=14%  Similarity=0.172  Sum_probs=152.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEEcC------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYLG------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      ...+.|+..+.||+|+||.||+|.+++      ..||||++.... .      ......|.+|++++++++||||+ +++
T Consensus         4 i~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~------~~~~~~~~~E~~il~~l~H~nIv~~~g   76 (283)
T d1mqba_           4 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-T------EKQRVDFLGEAGIMGQFSHHNIIRLEG   76 (283)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-C------HHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-C------hHHHHHHHHHHHHHHhcCCCCEeeeeE
Confidence            344557788999999999999999742      369999863221 1      11245789999999999999999 333


Q ss_pred             C--CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          86 V--QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        86 ~--~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                      .  ....++.+++|+.+..+       ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+
T Consensus        77 ~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGl  156 (283)
T d1mqba_          77 VISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL  156 (283)
T ss_dssp             EECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             EEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccch
Confidence            2  11222223444333221       34688899999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecccccc----------------
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA----------------  217 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~----------------  217 (260)
                      ++...........        .....+.+ +.+|+.+  ..+++++||||||+++||++++..|                
T Consensus       157 a~~~~~~~~~~~~--------~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~  228 (283)
T d1mqba_         157 SRVLEDDPEATYT--------TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND  228 (283)
T ss_dssp             -------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred             hhcccCCCccceE--------eccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhc
Confidence            9876443211100        00111222 3344433  5688999999999999999986543                


Q ss_pred             -----------ccHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         218 -----------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       218 -----------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                 ..+.+++.+|+...+.. ||++.++++.|..+
T Consensus       229 ~~~~~~~~~~~~~l~~li~~cl~~~p~~-RPt~~eil~~L~~l  270 (283)
T d1mqba_         229 GFRLPTPMDCPSAIYQLMMQCWQQERAR-RPKFADIVSILDKL  270 (283)
T ss_dssp             TCCCCCCTTCBHHHHHHHHHHTCSSTTT-SCCHHHHHHHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHCcCCHhH-CcCHHHHHHHHHHH
Confidence                       22567888888866665 57888888877765

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.3e-40  Score=269.21  Aligned_cols=219  Identities=14%  Similarity=0.162  Sum_probs=145.7

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--Cc---cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GR---SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      .+.|++.+.||+|+||.||+|++.  ++   .||||.+....       .....+.|.+|++++++++||||+ +++   
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~   97 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-------TEKQRRDFLSEASIMGQFDHPNVIHLEGVVT   97 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-------CHHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence            455788899999999999999984  32   47788643211       111246799999999999999999 333   


Q ss_pred             -CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 -VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 -~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                       ....++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus        98 ~~~~~~iv~Ey~~~g~L~~~~~~~--~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla  175 (299)
T d1jpaa_          98 KSTPVMIITEFMENGSLDSFLRQN--DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS  175 (299)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred             eCCEEEEEEEecCCCcceeeeccc--cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccc
Confidence             222222       4555554432  235889999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      +.........+..     .... ..+++ +++|+..  ..+++++||||||+++||++| |..|+.              
T Consensus       176 ~~~~~~~~~~~~~-----~~~~-~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~  249 (299)
T d1jpaa_         176 RFLEDDTSDPTYT-----SALG-GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQD  249 (299)
T ss_dssp             --------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred             eEccCCCCcceee-----eccc-ccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            8765432211100     0000 11223 3344433  568899999999999999998 665532              


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                                  +.+++.+|+...+.. ||++.++++.|+++
T Consensus       250 ~~~~~~~~~~~~l~~li~~cl~~~P~~-RPs~~ei~~~L~~~  290 (299)
T d1jpaa_         250 YRLPPPMDCPSALHQLMLDCWQKDRNH-RPKFGQIVNTLDKM  290 (299)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSTTT-SCCHHHHHHHHHHH
T ss_pred             CCCCCCccchHHHHHHHHHHcCCCHhH-CcCHHHHHHHHHHH
Confidence                        456667777755555 46777777777654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-40  Score=268.03  Aligned_cols=217  Identities=16%  Similarity=0.174  Sum_probs=149.9

Q ss_pred             eeeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---CCchhh--
Q psy7935          22 ECFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---VQKSAI--   91 (260)
Q Consensus        22 ~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~~~~~~--   91 (260)
                      ++||+|+||.||+|.+.    ++.||||++.... ..     ....+.+.+|++++++++||||+ +++   ....++  
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~-----~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-ND-----PALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CC-----HHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEE
Confidence            47999999999999873    4679999864322 11     12256799999999999999999 332   223222  


Q ss_pred             -----hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          92 -----QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        92 -----~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                           ++|.+++...   ..+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus        87 E~~~~g~L~~~l~~~---~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~  163 (277)
T d1xbba_          87 EMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  163 (277)
T ss_dssp             ECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE
T ss_pred             EcCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccc
Confidence                 4555555433   35899999999999999999999999999999999999999999999999999876543322


Q ss_pred             cccccccccceeeeeeeee-ecCcccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc----ccC
Q psy7935         167 AVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR----RQN  235 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~----~~~  235 (260)
                      ...        .....+++ +++|+.+  ..++.++||||||+++||+++ |..|+.   ..++...+..+.+    ...
T Consensus       164 ~~~--------~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~  235 (277)
T d1xbba_         164 YKA--------QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC  235 (277)
T ss_dssp             EEC------------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred             ccc--------ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence            111        11122233 3344444  568899999999999999997 676654   3444444444332    122


Q ss_pred             CccHHHHHHHHHHhcccccc
Q psy7935         236 RKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       236 ~~~~~~il~~l~~~~~~~r~  255 (260)
                      ++.+.+++.+|...++..|.
T Consensus       236 ~~~~~~li~~cl~~dp~~RP  255 (277)
T d1xbba_         236 PREMYDLMNLCWTYDVENRP  255 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSC
T ss_pred             CHHHHHHHHHHcCCCHhHCc
Confidence            34455566666555555553

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-40  Score=268.10  Aligned_cols=187  Identities=17%  Similarity=0.181  Sum_probs=137.1

Q ss_pred             cccCcce-eeccCCceeEEEEEEc----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---C
Q psy7935          16 MVLQPAE-CFKQGAEGRIFKTEYL----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---V   86 (260)
Q Consensus        16 ~~~~~~~-~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---~   86 (260)
                      +.+.+.+ +||+|+||.||+|.+.    +..||||++....       .....+.+.+|++++++++||||+ +++   .
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~   80 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA   80 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-------CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc
Confidence            3455566 4999999999999873    4579999864321       112356799999999999999999 333   2


Q ss_pred             Cchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935          87 QKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus        87 ~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ...++       ++|.+++...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.
T Consensus        81 ~~~~lvmE~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~  158 (285)
T d1u59a_          81 EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKA  158 (285)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CeEEEEEEeCCCCcHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhc
Confidence            22222       5566655332  23589999999999999999999999999999999999999999999999999987


Q ss_pred             ccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD  219 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~  219 (260)
                      ..........        .....+.+.| +|+..  ..+++++||||||+++||++| |..|+.
T Consensus       159 ~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~  214 (285)
T d1u59a_         159 LGADDSYYTA--------RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK  214 (285)
T ss_dssp             CTTCSCEECC--------CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             cccccccccc--------ccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCC
Confidence            6543221110        0111233334 44433  568999999999999999987 776643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.3e-40  Score=275.41  Aligned_cols=220  Identities=16%  Similarity=0.151  Sum_probs=165.0

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      +.|++.+.||+|+||.||+|++.  |+.||||++....     .   ...+.+.+|+.++++++||||+ +    .+...
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-----~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----E---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-----H---HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc-----h---hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            46899999999999999999984  8999999864321     1   1246789999999999999999 3    33223


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEeeccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~~  159 (260)
                      .++       ++|.+++...  ...+++..+..++.||+.||+|||++||+||||||+|||++.  ++.+||+|||+++.
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~--~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~  175 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH  175 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCT--TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchhee
Confidence            222       4555555322  235899999999999999999999999999999999999964  68999999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-  233 (260)
                      .......           .+..++..+++|+.+  ..++.++|+||+|++++++++|..|+.   ..+.+..+...... 
T Consensus       176 ~~~~~~~-----------~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~  244 (350)
T d1koaa2         176 LDPKQSV-----------KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM  244 (350)
T ss_dssp             CCTTSCE-----------EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS
T ss_pred             ccccccc-----------ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            6443211           112223333444444  457889999999999999999999876   55666666654322 


Q ss_pred             ------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ..++.+.+++.+|...++..|..
T Consensus       245 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t  273 (350)
T d1koaa2         245 DDSAFSGISEDGKDFIRKLLLADPNTRMT  273 (350)
T ss_dssp             CCGGGGGCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             CcccccCCCHHHHHHHHHHccCChhHCcC
Confidence                  23456788899998888888864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-40  Score=265.16  Aligned_cols=214  Identities=18%  Similarity=0.256  Sum_probs=155.2

Q ss_pred             cccccccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---C
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---Q   87 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~   87 (260)
                      +...+.|+..+.||+|+||.||+|+++|.+||||++....          ..+.+.+|++++++++||||+ +++.   .
T Consensus         3 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~----------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~   72 (262)
T d1byga_           3 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEE   72 (262)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             ccCHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHH----------HHHHHHHHHHHHHhCCCCCEeeEEEEEEec
Confidence            4556678889999999999999999999999999863221          135789999999999999999 3331   1


Q ss_pred             chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          88 KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...+         ++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++
T Consensus        73 ~~~~~lv~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~  151 (262)
T d1byga_          73 KGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK  151 (262)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred             CCcEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccce
Confidence            2222         56666654332 2347899999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccc-ccc------------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTE-DKA------------------  217 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~-~~~------------------  217 (260)
                      .........             .+...+.+|+..  ..+++++||||||++++|++|+ +.|                  
T Consensus       152 ~~~~~~~~~-------------~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~  218 (262)
T d1byga_         152 EASSTQDTG-------------KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK  218 (262)
T ss_dssp             -----------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC
T ss_pred             ecCCCCccc-------------cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC
Confidence            654332111             111123344433  5689999999999999999984 432                  


Q ss_pred             --------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 --------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 --------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                              +.+.+++.+|+...|.. ||++.++++.|++++
T Consensus       219 ~~~~~~~~~~~~~li~~cl~~dP~~-Rps~~~l~~~L~~i~  258 (262)
T d1byga_         219 MDAPDGCPPAVYEVMKNCWHLDAAM-RPSFLQLREQLEHIK  258 (262)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcccCHhH-CcCHHHHHHHHHHHH
Confidence                    22567777777766665 567778877777664

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.3e-40  Score=275.96  Aligned_cols=224  Identities=12%  Similarity=0.142  Sum_probs=162.9

Q ss_pred             ccccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHH---HHHhhhcccCCCCeE-----Ee
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERIT---SEIRGLMKCRMADIC-----LD   84 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~---~e~~~l~~~~h~~i~-----~~   84 (260)
                      -+.|++.+.||+|+||.||+|++  +|+.||||++......     .......+.   +++.+++.++||||+     +.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~-----~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~   77 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH   77 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-----HHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcc-----hhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEE
Confidence            35688899999999999999998  4899999986543221     111122333   447778888999999     33


Q ss_pred             CCCchhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          85 DVQKSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        85 ~~~~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      +....++  ++||+.+..+      ...+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus        78 ~~~~~~i--vmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~  155 (364)
T d1omwa3          78 TPDKLSF--ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC  155 (364)
T ss_dssp             CSSEEEE--EECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCE
T ss_pred             ECCEEEE--EEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceee
Confidence            3333333  4455444333      2357889999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc------HHHHHHHHHh
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD------FRDMFNWILS  229 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~------~~~~~~~~~~  229 (260)
                      ........            ...++..+++|+.+   ..+++++|+||+||+++++++|..|+.      ...+......
T Consensus       156 ~~~~~~~~------------~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~  223 (364)
T d1omwa3         156 DFSKKKPH------------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT  223 (364)
T ss_dssp             ECSSSCCC------------SCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSS
T ss_pred             ecCCCccc------------ccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc
Confidence            66543211            11233334455544   347899999999999999999999875      2233333333


Q ss_pred             hc---cccCCccHHHHHHHHHHhcccccccc
Q psy7935         230 SY---RRQNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       230 ~~---~~~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ..   +...++.+.+++.+|...++..|..+
T Consensus       224 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~  254 (364)
T d1omwa3         224 MAVELPDSFSPELRSLLEGLLQRDVNRRLGC  254 (364)
T ss_dssp             CCCCCCSSSCHHHHHHHHHHTCSSTTTSTTT
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccCHHHhCCC
Confidence            22   23346778999999999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-40  Score=270.21  Aligned_cols=228  Identities=15%  Similarity=0.205  Sum_probs=156.7

Q ss_pred             cccccccCcceeeccCCceeEEEEEEcC-------ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYLG-------RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      +.+.+.|++.+.||+|+||.||+|++.+       ..||+|.+.....       ......+.+|+.++.++ +||||+ 
T Consensus        33 ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~HpnIv~  105 (325)
T d1rjba_          33 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-------SSEREALMSELKMMTQLGSHENIVN  105 (325)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-------HHHHHHHHHHHHHHHHhcCCCcEeE
Confidence            3455678999999999999999999842       2588987543221       11245789999999998 899999 


Q ss_pred             Ee----CCCchhh-------hhHHHhhccCcc--------------------cccchHHHHHHHHHHHHHHHHHhhhCCc
Q psy7935          83 LD----DVQKSAI-------QTLISNLDSQNI--------------------TRENISDIIKLLSIEIGTTLSVMHSNNI  131 (260)
Q Consensus        83 ~~----~~~~~~~-------~~l~~~l~~~~~--------------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i  131 (260)
                      ++    +....++       ++|.+++.....                    ...+++..++.++.|++.||+|||+++|
T Consensus       106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I  185 (325)
T d1rjba_         106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  185 (325)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            32    2233222       677777654321                    1347889999999999999999999999


Q ss_pred             eecCCCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeee-ecCcccc--ccccccceeEeeccee
Q psy7935         132 IHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAY-CWSKGTL--QSYNHHLVMIDFGLSQ  208 (260)
Q Consensus       132 ~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~di~s~g~~~  208 (260)
                      +||||||+|||++.++.+||+|||+|+..........         .+...+++ +.+|+.+  ..+++++||||||+++
T Consensus       186 iHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~---------~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil  256 (325)
T d1rjba_         186 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV---------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL  256 (325)
T ss_dssp             EETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEE---------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             eeccCchhccccccCCeEEEeeccccccccCCCceee---------eccccCCCccCChHHHcCCCCCcceeccchhHHH
Confidence            9999999999999999999999999987654432211         11122233 3444444  6689999999999999


Q ss_pred             eeecc-cccccc---H-HHHHHHHHhhcc----ccCCccHHHHHHHHHHhcccccc
Q psy7935         209 IKVST-EDKAVD---F-RDMFNWILSSYR----RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       209 ~~~~~-~~~~~~---~-~~~~~~~~~~~~----~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      +|++| |..|+.   . ..+.+.+..+.+    ...++.+.+++.+|...++..|.
T Consensus       257 ~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RP  312 (325)
T d1rjba_         257 WEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP  312 (325)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCc
Confidence            99997 776654   1 222222222221    22345566677777666666664

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=8.3e-40  Score=265.71  Aligned_cols=223  Identities=16%  Similarity=0.181  Sum_probs=161.1

Q ss_pred             cccCcceeeccCCceeEEEEEEc-CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCch
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL-GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKS   89 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~   89 (260)
                      ++|++++.||+|+||.||+|+++ |+.||||++......      ....+++.+|+.++++++||||+     +.+....
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~------~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED------EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG------GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcC------hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCce
Confidence            46889999999999999999985 899999987543321      11246789999999999999999     3433333


Q ss_pred             hh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccccc
Q psy7935          90 AI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVST  163 (260)
Q Consensus        90 ~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~  163 (260)
                      ++      +.+...+...  ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||.+.....+
T Consensus        76 ~i~~e~~~~~~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~  153 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (286)
T ss_dssp             EEEEECCSEEHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             eEEEEeehhhhHHHHHhh--cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccC
Confidence            33      2333333222  346999999999999999999999999999999999999999999999999999765443


Q ss_pred             ccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc------
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY------  231 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~------  231 (260)
                      .....          ...+...+.+|+..   ..+++++|+||+|++++++++|+.|+.   ..+.+.++....      
T Consensus       154 ~~~~~----------~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~  223 (286)
T d1ob3a_         154 VRKYT----------HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK  223 (286)
T ss_dssp             ------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             ccccc----------eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChh
Confidence            22111          11223334444443   457899999999999999999999876   333333333210      


Q ss_pred             --------------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 --------------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 --------------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                ....++.+.+++++|...+++.|..
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s  274 (286)
T d1ob3a_         224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT  274 (286)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             hccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcC
Confidence                                      1112345678899999999888864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-40  Score=269.97  Aligned_cols=219  Identities=14%  Similarity=0.135  Sum_probs=162.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-E----eCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-L----DDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~----~~~~~   88 (260)
                      ++|++.+.||+|+||.||+|.+.  |+.||||++..+.     .    ....+.+|++++++++||||+ +    .+...
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-----~----~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~   75 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----T----DQVLVKKEISILNIARHRNILHLHESFESMEE   75 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----H----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-----c----cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            45888999999999999999984  8899999864432     1    135688999999999999999 3    33333


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc--CCcEEEEeeccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS--DHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~kl~DFg~~~~  159 (260)
                      .++       ++|.+++...  ...+++..+..++.|++.||+|||++||+||||||+|||++.  ...+||+|||++..
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~--~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~  153 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ  153 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred             EEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhc
Confidence            233       4555555432  235899999999999999999999999999999999999985  45899999999976


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc-
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR-  233 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-  233 (260)
                      .......           .+..++.++++|+..  ..+++++|+||+|++++++++|..|+.   ..+++.++..+... 
T Consensus       154 ~~~~~~~-----------~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~  222 (321)
T d1tkia_         154 LKPGDNF-----------RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF  222 (321)
T ss_dssp             CCTTCEE-----------EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC
T ss_pred             cccCCcc-----------cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            5433211           122233334444443  568899999999999999999998875   55666666654322 


Q ss_pred             ------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 ------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 ------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                            ..++.+.+++++|...++..|..
T Consensus       223 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s  251 (321)
T d1tkia_         223 DEEAFKEISIEAMDFVDRLLVKERKSRMT  251 (321)
T ss_dssp             CHHHHTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred             ChhhccCCCHHHHHHHHHHccCChhHCcC
Confidence                  23455677888888778877764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-40  Score=266.00  Aligned_cols=221  Identities=14%  Similarity=0.226  Sum_probs=147.2

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-----CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-----GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD   85 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~   85 (260)
                      +.+.+.|++.+.||+|+||.||+|++.     +..||||.+...  .     .....+.+.+|+.++++++||||+ +++
T Consensus         3 ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~~   75 (273)
T d1mp8a_           3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--T-----SDSVREKFLQEALTMRQFDHPHIVKLIG   75 (273)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--T-----SHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             CcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--c-----CHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            345677999999999999999999973     245777764221  1     122356799999999999999999 333


Q ss_pred             C-CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          86 V-QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        86 ~-~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      . ....++.+++|+.+..+       ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|
T Consensus        76 ~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a  155 (273)
T d1mp8a_          76 VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS  155 (273)
T ss_dssp             EECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred             EEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhh
Confidence            2 12223234444433222       235789999999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecC-cccc--ccccccceeEeecceeeeecc-cccccc--------------
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWS-KGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD--------------  219 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~--------------  219 (260)
                      +.........+          +...+++.|. |+..  ..++.++|+||||+++||+++ |..|+.              
T Consensus       156 ~~~~~~~~~~~----------~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~  225 (273)
T d1mp8a_         156 RYMEDSTYYKA----------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG  225 (273)
T ss_dssp             -------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTT
T ss_pred             eeccCCcceec----------cceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            76543322111          1122333343 3433  578899999999999999987 554322              


Q ss_pred             ------------HHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         220 ------------FRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       220 ------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                  +.+++.+|+...|.. |+++.++++.|..+.
T Consensus       226 ~~~~~~~~~~~~~~~li~~cl~~dp~~-Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         226 ERLPMPPNCPPTLYSLMTKCWAYDPSR-RPRFTELKAQLSTIL  267 (273)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCHhH-CcCHHHHHHHHHHHH
Confidence                        456666666655555 456677776666553

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-40  Score=265.01  Aligned_cols=227  Identities=17%  Similarity=0.226  Sum_probs=149.0

Q ss_pred             cccCcceeeccCCceeEEEEEEc---C--ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-Cc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL---G--RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-QK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-~~   88 (260)
                      ++|++++.||+|+||.||+|++.   +  .+||||++........     ...+.|.+|+.++++++||||+ +++. ..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~-----~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQP-----EAMDDFIREVNAMHSLDHRNLIRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------C-----HHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCH-----HHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            45889999999999999999873   2  3689998654332222     2246799999999999999999 3331 11


Q ss_pred             hhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..++.+++|+..+.+       ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        83 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          83 PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcc
Confidence            122234444443322       3458999999999999999999999999999999999999999999999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccccc---HHHHHHHHHhhcc--
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKAVD---FRDMFNWILSSYR--  232 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~~~---~~~~~~~~~~~~~--  232 (260)
                      .......        ......+++.| +|+..  ..+++++|+||||+++||++| |..|+.   ..+.+..+.....  
T Consensus       163 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~  234 (273)
T d1u46a_         163 QNDDHYV--------MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL  234 (273)
T ss_dssp             C-CCEEE--------C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC
T ss_pred             cCCCcce--------ecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC
Confidence            4432211        11122233334 34433  568899999999999999998 677654   3444444443311  


Q ss_pred             ---ccCCccHHHHHHHHHHhcccccc
Q psy7935         233 ---RQNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       233 ---~~~~~~~~~il~~l~~~~~~~r~  255 (260)
                         ...++.+.+++++|...++..|.
T Consensus       235 ~~~~~~~~~l~~li~~cl~~dp~~RP  260 (273)
T d1u46a_         235 PRPEDCPQDIYNVMVQCWAHKPEDRP  260 (273)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCcccccHHHHHHHHHHcCCChhHCc
Confidence               12234556666666666666664

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-40  Score=269.85  Aligned_cols=222  Identities=15%  Similarity=0.153  Sum_probs=154.7

Q ss_pred             cceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCchhhh
Q psy7935          20 PAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQKSAIQ   92 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~~~~~   92 (260)
                      .++.||+|+||.||+|++  +|+.||||++........   .....+.+.+|+.++++++||||+     +.+...  ++
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~--~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA---KDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN--IS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC--CE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhh---hHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCc--ee
Confidence            468999999999999998  489999998654322111   111134688999999999999999     322222  33


Q ss_pred             hHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccccccc
Q psy7935          93 TLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVSTEDK  166 (260)
Q Consensus        93 ~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~~~~~  166 (260)
                      .++||+.+...      ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus        77 ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~  156 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA  156 (299)
T ss_dssp             EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCC
T ss_pred             ehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccc
Confidence            34454443221      345888999999999999999999999999999999999999999999999999765543221


Q ss_pred             cccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhc---------
Q psy7935         167 AVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSY---------  231 (260)
Q Consensus       167 ~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~---------  231 (260)
                      .          .+..++..+.+|+..   ..++.++||||+|++++++++|..|+.   ..+.+..+.+..         
T Consensus       157 ~----------~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~  226 (299)
T d1ua2a_         157 Y----------THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  226 (299)
T ss_dssp             C----------CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             c----------cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhcc
Confidence            1          111222334444443   347899999999999999999987775   333333333211         


Q ss_pred             ----------------------cccCCccHHHHHHHHHHhccccccc
Q psy7935         232 ----------------------RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       232 ----------------------~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                            ....++.+.+++++|...++..|..
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s  273 (299)
T d1ua2a_         227 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  273 (299)
T ss_dssp             STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             chhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC
Confidence                                  0122456778888888888888864

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-40  Score=268.48  Aligned_cols=222  Identities=16%  Similarity=0.185  Sum_probs=147.0

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-   82 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-   82 (260)
                      +.+.+.|++.+.||+|+||.||+|++.       ++.||||++....       .....+.+.+|...+.++ .|+||+ 
T Consensus         9 ei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1           9 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------CcHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            344677999999999999999999973       3679999853221       111245678888888877 578887 


Q ss_pred             ---EeCCCch--hh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCC
Q psy7935          83 ---LDDVQKS--AI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLT  137 (260)
Q Consensus        83 ---~~~~~~~--~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlk  137 (260)
                         +......  ++       ++|.+++.....             ...+++..+..++.|++.||+|||+++|+|||||
T Consensus        82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK  161 (299)
T d1ywna1          82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  161 (299)
T ss_dssp             EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred             eeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCC
Confidence               2222222  22       667777654321             2347889999999999999999999999999999


Q ss_pred             CCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccc
Q psy7935         138 TSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTED  215 (260)
Q Consensus       138 p~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~  215 (260)
                      |+|||++.++.+||+|||+|+...........        .+..++..+++|+.+  ..+++++||||+|+++++++++.
T Consensus       162 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~--------~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~  233 (299)
T d1ywna1         162 ARNILLSEKNVVKICDFGLARDIYKDPDYVRK--------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG  233 (299)
T ss_dssp             GGGEEECGGGCEEECC------CCSCTTSCCT--------TSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             ccceeECCCCcEEEccCcchhhcccccccccc--------CceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCC
Confidence            99999999999999999999865443321110        011222233444444  56889999999999999999875


Q ss_pred             cc-cc---------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         216 KA-VD---------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       216 ~~-~~---------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                      .| +.                           +.+++.+|++..|.. |+++.++++.|.++
T Consensus       234 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~-Rpt~~eil~~L~~i  294 (299)
T d1ywna1         234 ASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ-RPTFSELVEHLGNL  294 (299)
T ss_dssp             CCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHH
Confidence            42 21                           345566666655544 45666666666554

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=265.76  Aligned_cols=187  Identities=18%  Similarity=0.219  Sum_probs=137.9

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      +.|++++.||+|+||.||+|++.  |+.||||++.......      ...+.+.+|++++++++||||+     +.+...
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~------~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE------GVPSTAIREISLLKELNHPNIVKLLDVIHTENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcCh------HHHHHHHHHHHHHHhCCCCcEEEeccccccccc
Confidence            45888999999999999999984  8999999874432211      1245789999999999999999     333323


Q ss_pred             hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          89 SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        89 ~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                      .++      +.+.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        76 ~~iv~e~~~~~~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          76 LYLVFEFLHQDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             EEEEEECCSEEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             eeEEEeecCCchhhhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccC
Confidence            222      33333332221 34589999999999999999999999999999999999999999999999999976644


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......          ...++..+.+|+..   ...+.++|+||+|++++++++|+.|+.
T Consensus       155 ~~~~~~----------~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~  204 (298)
T d1gz8a_         155 PVRTYT----------HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP  204 (298)
T ss_dssp             CSBCTT----------CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             Ccccce----------eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCC
Confidence            332211          11122223333322   346789999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-40  Score=267.83  Aligned_cols=224  Identities=11%  Similarity=0.136  Sum_probs=157.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC--CCCeE-----EeC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR--MADIC-----LDD   85 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~--h~~i~-----~~~   85 (260)
                      +++|++.+.||+|+||.||+|++.  |+.||||++............  ...++.+|+.++++++  ||||+     +.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~--~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~   80 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSSGFSGVIRLLDWFER   80 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECT--TCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhh--HHHHHHHHHHHHHHhccCCCCccEEEEEEee
Confidence            456888999999999999999984  899999987655433221100  1234668999999886  89999     223


Q ss_pred             CCchhh--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-CCcEEEEeecc
Q psy7935          86 VQKSAI--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-DHHLVMIDFGL  156 (260)
Q Consensus        86 ~~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-~~~~kl~DFg~  156 (260)
                      ....++        +++.+++...   ..+++..++.++.|++.||+|||++||+||||||+|||++. ++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_          81 PDSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CCeEEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECcccc
Confidence            222222        3444444432   35899999999999999999999999999999999999985 57999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeeccccccccHHHHHHHHHhhccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRR  233 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (260)
                      |+........            +..++..+.+|+.+   ..++.++|+||+|++++++++|..|+...+-+.+.....+.
T Consensus       158 a~~~~~~~~~------------~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~~~~~~~~~  225 (273)
T d1xwsa_         158 GALLKDTVYT------------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ  225 (273)
T ss_dssp             CEECCSSCBC------------CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSS
T ss_pred             ceeccccccc------------ccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHhhcccCCCC
Confidence            9765432211            11222333344433   23467799999999999999999988743322222222344


Q ss_pred             cCCccHHHHHHHHHHhcccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRK  255 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~  255 (260)
                      ..++.+.+++++|...++..|.
T Consensus       226 ~~s~~~~~li~~~L~~dp~~R~  247 (273)
T d1xwsa_         226 RVSSECQHLIRWCLALRPSDRP  247 (273)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSC
T ss_pred             CCCHHHHHHHHHHccCCHhHCc
Confidence            4466777777777777777775

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=268.30  Aligned_cols=225  Identities=17%  Similarity=0.184  Sum_probs=166.8

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhc-ccCCCCeE-----EeCCC
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLM-KCRMADIC-----LDDVQ   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~-~~~h~~i~-----~~~~~   87 (260)
                      +.|++.+.||+|+||.||+|++  +|+.||||++.....     ......+.+..|..++. .++||||+     +.+..
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~-----~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhc-----cChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCC
Confidence            3578899999999999999999  489999998653221     11112345667777665 68999999     33333


Q ss_pred             chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .  ++.++||+.++.+      ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        77 ~--~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          77 N--LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             E--EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             c--eeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            3  3334444444332      2358889999999999999999999999999999999999999999999999997654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHHHhhccc---
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWILSSYRR---  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---  233 (260)
                      ......+          ...++..+++|+..  ..+++++|+||+||+++++++|..|+.   ..++..++..+.+.   
T Consensus       155 ~~~~~~~----------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~  224 (320)
T d1xjda_         155 LGDAKTN----------TFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR  224 (320)
T ss_dssp             CTTCCBC----------CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred             ccccccc----------ccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence            4322211          11122333344444  568899999999999999999999986   66777777665442   


Q ss_pred             cCCccHHHHHHHHHHhcccccccc
Q psy7935         234 QNRKQFETVMKTFAEVELRGRKRC  257 (260)
Q Consensus       234 ~~~~~~~~il~~l~~~~~~~r~~~  257 (260)
                      ..++.+.+++++|...++..|...
T Consensus       225 ~~s~~~~dli~~~L~~dP~~R~s~  248 (320)
T d1xjda_         225 WLEKEAKDLLVKLFVREPEKRLGV  248 (320)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSBTT
T ss_pred             cCCHHHHHHHHHhcccCCCCCcCH
Confidence            346788999999999999999753

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=265.72  Aligned_cols=215  Identities=17%  Similarity=0.305  Sum_probs=153.6

Q ss_pred             cccCcceeeccCCceeEEEEEEc--Cc----cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeC---
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GR----SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDD---   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~---   85 (260)
                      ..|++++.||+|+||.||+|++.  |+    +||+|.+....       .....+.+.+|++++++++||||+ +++   
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~   81 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRLLGICL   81 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----------CTHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            45889999999999999999984  44    57777653211       111246799999999999999999 322   


Q ss_pred             CCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          86 VQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      .....+       ++|.+++...  ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+
T Consensus        82 ~~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~  159 (317)
T d1xkka_          82 TSTVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  159 (317)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHH
T ss_pred             cCCeeEEEEeccCCccccccccc--ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccce
Confidence            122222       5666665443  3468899999999999999999999999999999999999999999999999998


Q ss_pred             cccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecc-cccc-----------------
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVST-EDKA-----------------  217 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~-~~~~-----------------  217 (260)
                      ...........         ....+++.| +|+.+  ..++.++|+||||++++|++| |..|                 
T Consensus       160 ~~~~~~~~~~~---------~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~  230 (317)
T d1xkka_         160 LLGAEEKEYHA---------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE  230 (317)
T ss_dssp             HTTTTCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC
T ss_pred             ecccccccccc---------cccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC
Confidence            76543221110         111223333 44433  568999999999999999998 4433                 


Q ss_pred             ---------ccHHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         218 ---------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       218 ---------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                               ..+.+++.+|+...+.. ||++.++++.+..+
T Consensus       231 ~~~~p~~~~~~~~~li~~cl~~dP~~-RPs~~eil~~l~~~  270 (317)
T d1xkka_         231 RLPQPPICTIDVYMIMVKCWMIDADS-RPKFRELIIEFSKM  270 (317)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHhCCCChhh-CcCHHHHHHHHHHH
Confidence                     22557777777766665 56778887776654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-38  Score=257.97  Aligned_cols=221  Identities=16%  Similarity=0.176  Sum_probs=160.9

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCCCc
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDVQK   88 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~~~   88 (260)
                      ++|++++.||+|+||+||+|++  +|+.||||++....... .     ...++.+|+.+++.++||||+     +.+...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~-~-----~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-G-----VPSSALREICLLKELKHKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST-T-----HHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCCh-H-----HHHHHHHHHHHHHhcCcCCEEeeccccccccc
Confidence            4688999999999999999998  48899999975443221 1     246789999999999999998     333333


Q ss_pred             hhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          89 SAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        89 ~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ..+       +++..++...   +.+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||.++...
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~  152 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             eeEEeeeccccccccccccc---cccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhccc
Confidence            333       4444444433   367889999999999999999999999999999999999999999999999998765


Q ss_pred             ccccccccccccccceeeeeeeeeecCccc-c---ccccccceeEeecceeeeecccccccc----HHHHHHHHHhhccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGT-L---QSYNHHLVMIDFGLSQIKVSTEDKAVD----FRDMFNWILSSYRR  233 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~di~s~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~  233 (260)
                      .......           ...+.+++.+++ .   ..+++++|+||+|++++++++|+.|+.    ..+.+..+......
T Consensus       153 ~~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~  221 (292)
T d1unla_         153 IPVRCYS-----------AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT  221 (292)
T ss_dssp             SCCSCCC-----------SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCC
T ss_pred             CCCccce-----------eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCC
Confidence            4332111           112223333332 2   346889999999999999999998853    34444433221110


Q ss_pred             --------------------------------cCCccHHHHHHHHHHhccccccc
Q psy7935         234 --------------------------------QNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       234 --------------------------------~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                                                      ...+.+.+++.+|.+.+++.|..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~s  276 (292)
T d1unla_         222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS  276 (292)
T ss_dssp             CCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcC
Confidence                                            11245678889988888888864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-38  Score=263.03  Aligned_cols=185  Identities=20%  Similarity=0.247  Sum_probs=138.4

Q ss_pred             ccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----Ee-CCC--
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LD-DVQ--   87 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~-~~~--   87 (260)
                      +|++++.||+|+||.||+|+++  |+.||||++....       .....+.+.+|++++++++||||+    .+ ...  
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-------HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-------ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecccc
Confidence            5889999999999999999984  9999999864321       112246789999999999999999    22 111  


Q ss_pred             ---chhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          88 ---KSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        88 ---~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                         ..++      ++|.+++...    .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus        82 ~~~~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~  157 (345)
T d1pmea_          82 QMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  157 (345)
T ss_dssp             TCCCEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ccceEEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCcee
Confidence               1111      7788887654    48999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ...........       ....++...+.+|+.+   ..+++++|+||+|++++++++|..|+.
T Consensus       158 ~~~~~~~~~~~-------~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~  214 (345)
T d1pmea_         158 VADPDHDHTGF-------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP  214 (345)
T ss_dssp             ECCGGGCBCCT-------TCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             eccCCCcccee-------eccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCC
Confidence            66444322110       0112222333444433   456789999999999999999988864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-38  Score=261.12  Aligned_cols=215  Identities=14%  Similarity=0.172  Sum_probs=155.8

Q ss_pred             ceeeccCCceeEEEEEEc---C--ccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC---Cchhh
Q psy7935          21 AECFKQGAEGRIFKTEYL---G--RSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV---QKSAI   91 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~---~~~~~   91 (260)
                      .+.||+|+||.||+|++.   +  ..||||.+...  .     .....+++.+|++++++++||||+ +++.   .....
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~-----~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~  104 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--T-----DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  104 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCC--C-----CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--c-----CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCce
Confidence            468999999999999983   2  25889975321  1     112246799999999999999999 3322   12222


Q ss_pred             ---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccccccc
Q psy7935          92 ---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKVS  162 (260)
Q Consensus        92 ---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~~  162 (260)
                               ++|.+++...  ....++..+..++.|++.||.|||+++|+||||||+|||+++++.+||+|||+++....
T Consensus       105 ~lv~E~~~~g~l~~~~~~~--~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             EEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTT
T ss_pred             EEEEEEeecCchhhhhccc--cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccc
Confidence                     4455544433  33467788889999999999999999999999999999999999999999999987654


Q ss_pred             cccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc----------------------
Q psy7935         163 TEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV----------------------  218 (260)
Q Consensus       163 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~----------------------  218 (260)
                      .........      ....++..+++|+..  ..++.++||||||++++|++++..|+                      
T Consensus       183 ~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p  256 (311)
T d1r0pa_         183 KEFDSVHNK------TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP  256 (311)
T ss_dssp             TTCCCTTCT------TCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCC
T ss_pred             cccccceec------ccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCc
Confidence            332211100      001122223344433  56899999999999999999976542                      


Q ss_pred             -----cHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         219 -----DFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       219 -----~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                           .+.+++.+|+...|.. ||++.|+++.|+++..
T Consensus       257 ~~~~~~l~~li~~cl~~dP~~-RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         257 EYCPDPLYEVMLKCWHPKAEM-RPSFSELVSRISAIFS  293 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHcCCCHhH-CcCHHHHHHHHHHHHH
Confidence                 3668888999977776 6889999999887753

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-38  Score=261.54  Aligned_cols=226  Identities=18%  Similarity=0.239  Sum_probs=157.3

Q ss_pred             cccccCcceeeccCCceeEEEEEEc---CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc---CCCCeE-EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL---GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC---RMADIC-LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~---~h~~i~-~~~~   86 (260)
                      .+++|++++.||+|+||.||+|++.   ++.||||++.........      ...+.+|+.+++.+   +||||+ +++.
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~------~~~~~~E~~~l~~l~~~~HpnIv~~~~~   78 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM------PLSTIREVAVLRHLETFEHPNVVRLFDV   78 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSC------BCTHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchH------HHHHHHHHHHHHHHhhcCCCCcceeeee
Confidence            4567999999999999999999983   567999987654332211      12355677766655   799999 4332


Q ss_pred             -------CchhhhhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEE
Q psy7935          87 -------QKSAIQTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        87 -------~~~~~~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                             ....++.+++++.+..+       ...+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+
T Consensus        79 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~  158 (305)
T d1blxa_          79 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA  158 (305)
T ss_dssp             EEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             ecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeec
Confidence                   12223333444333211       3458899999999999999999999999999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc---HHHHHHHH
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD---FRDMFNWI  227 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~---~~~~~~~~  227 (260)
                      |||+++.........           +..++..+.+|+..  ..+++++|+||+|++++++++|..|+.   ..+.+..+
T Consensus       159 dfg~~~~~~~~~~~~-----------~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i  227 (305)
T d1blxa_         159 DFGLARIYSFQMALT-----------SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI  227 (305)
T ss_dssp             SCCSCCCCCGGGGGC-----------CCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             chhhhhhhcccccCC-----------CcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            999987654332111           11222233344433  568899999999999999999998876   33444443


Q ss_pred             Hhh------------------------------ccccCCccHHHHHHHHHHhccccccc
Q psy7935         228 LSS------------------------------YRRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       228 ~~~------------------------------~~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      +..                              .....++.+.+++.+|...++..|..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~s  286 (305)
T d1blxa_         228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS  286 (305)
T ss_dssp             HHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC
T ss_pred             HHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcC
Confidence            321                              11122345677888888888888864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-38  Score=261.45  Aligned_cols=194  Identities=18%  Similarity=0.225  Sum_probs=138.7

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----   86 (260)
                      ..++|++++.||+|+||.||+|++.  |+.||||++........      ...++.+|++++++++|||++ +++.    
T Consensus         8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~------~~~~~~~E~~il~~l~h~nii~~~~~~~~~   81 (318)
T d3blha1           8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG------FPITALREIKILQLLKHENVVNLIEICRTK   81 (318)
T ss_dssp             BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTS------SCHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred             ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchH------HHHHHHHHHHHHHHhcCCCccceEeeeecc
Confidence            3467999999999999999999984  89999998654433221      235688999999999999999 2221    


Q ss_pred             C------chhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEee
Q psy7935          87 Q------KSAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDF  154 (260)
Q Consensus        87 ~------~~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DF  154 (260)
                      .      ...++.+++++.....      ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus        82 ~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~df  161 (318)
T d3blha1          82 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADF  161 (318)
T ss_dssp             ---------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred             cccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeec
Confidence            1      1122333444332211      346888999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         155 GLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       155 g~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |++............      ...+..++..+.+|+..   ..+++++|+||+|++++++++|+.|+.
T Consensus       162 g~~~~~~~~~~~~~~------~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~  223 (318)
T d3blha1         162 GLARAFSLAKNSQPN------RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ  223 (318)
T ss_dssp             TTCEECCC-----CC------CCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ceeeecccccccccc------cccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCC
Confidence            999765433211111      01112233334445543   357899999999999999999988875

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-38  Score=258.57  Aligned_cols=216  Identities=14%  Similarity=0.174  Sum_probs=156.5

Q ss_pred             cccCcceeeccCCceeEEEEEEc--Cc--cEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeC----
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GR--SVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDD----   85 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~----   85 (260)
                      +.|++.+.||+|+||.||+|++.  |.  .||||.+.....       ....+.+.+|++++.++ +||||+ +++    
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~   82 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-------KDDHRDFAGELEVLCKLGHHPNIINLLGACEH   82 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCCTTBCCEEEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC-------hHHHHHHHHHHHHHHhccCCCCEeeEEEEEec
Confidence            45788899999999999999984  44  466776432211       11245799999999998 799999 333    


Q ss_pred             CCchhh-------hhHHHhhccCc-------------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc
Q psy7935          86 VQKSAI-------QTLISNLDSQN-------------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS  145 (260)
Q Consensus        86 ~~~~~~-------~~l~~~l~~~~-------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~  145 (260)
                      ....++       ++|.+++....             ....+++..+..++.|++.||.|||+++|+||||||+|||++.
T Consensus        83 ~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~  162 (309)
T d1fvra_          83 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE  162 (309)
T ss_dssp             TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECG
T ss_pred             CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcC
Confidence            222222       67777775431             1345899999999999999999999999999999999999999


Q ss_pred             CCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccc------
Q psy7935         146 DHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA------  217 (260)
Q Consensus       146 ~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~------  217 (260)
                      ++.+||+|||+++.........           ...++..+++|+.+  ..++.++|+||||+++++++++..|      
T Consensus       163 ~~~~kl~DfG~a~~~~~~~~~~-----------~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~  231 (309)
T d1fvra_         163 NYVAKIADFGLSRGQEVYVKKT-----------MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT  231 (309)
T ss_dssp             GGCEEECCTTCEESSCEECCC---------------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             CCceEEcccccccccccccccc-----------ceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC
Confidence            9999999999997654332211           11122223344444  5688999999999999999987542      


Q ss_pred             ---------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         218 ---------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       218 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                           .++.+++.+|+...|.. ||++.++++.|..+.
T Consensus       232 ~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~-RPs~~eil~~L~~i~  284 (309)
T d1fvra_         232 CAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYE-RPSFAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHHH
Confidence                                 22567778888866665 578888888877654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-39  Score=266.72  Aligned_cols=180  Identities=17%  Similarity=0.246  Sum_probs=135.5

Q ss_pred             ccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC-------
Q psy7935          17 VLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV-------   86 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~-------   86 (260)
                      .|+.++.||+|+||+||+|++  +|+.||||++....            ....+|++++++++||||+ +++.       
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------------~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~   88 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEK   88 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS------------SSCCHHHHHHHHCCCTTBCCEEEEEEEC--C
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc------------hHHHHHHHHHHhcCCCCCCcEEEEEEecCcc
Confidence            377889999999999999999  48999999875432            1134699999999999999 2211       


Q ss_pred             -CchhhhhHHHhhccCc---------ccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCC-cEEEEeec
Q psy7935          87 -QKSAIQTLISNLDSQN---------ITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDH-HLVMIDFG  155 (260)
Q Consensus        87 -~~~~~~~l~~~l~~~~---------~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~-~~kl~DFg  155 (260)
                       ...+++.++||+.+..         ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus        89 ~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG  168 (350)
T d1q5ka_          89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG  168 (350)
T ss_dssp             CSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred             CCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEeccc
Confidence             1222333444443321         133589999999999999999999999999999999999999764 89999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ++..........           +..++..+++|+..   ..++.++||||+||+++++++|..|+.
T Consensus       169 ~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~  224 (350)
T d1q5ka_         169 SAKQLVRGEPNV-----------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP  224 (350)
T ss_dssp             TCEECCTTSCCC-----------SCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSC
T ss_pred             chhhccCCcccc-----------cccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCC
Confidence            997664432211           12233444555543   457899999999999999999988765

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-38  Score=260.81  Aligned_cols=179  Identities=17%  Similarity=0.230  Sum_probs=134.9

Q ss_pred             cccCcce-eeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE-EeCCC---
Q psy7935          16 MVLQPAE-CFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC-LDDVQ---   87 (260)
Q Consensus        16 ~~~~~~~-~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~-~~~~~---   87 (260)
                      +.|++++ .||+|+||.||+|++  +|+.||||++..             ...+.+|++++.++ +||||+ +++..   
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~   77 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------------CPKARREVELHWRASQCPHIVRIVDVYENL   77 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------------cHHHHHHHHHHHHhcCCCCCCeEEEEEeec
Confidence            4577775 599999999999998  489999998632             13467899887655 899999 43321   


Q ss_pred             ---chhh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEE
Q psy7935          88 ---KSAI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMI  152 (260)
Q Consensus        88 ---~~~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~  152 (260)
                         ...+         ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.   ++.+||+
T Consensus        78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~  156 (335)
T d2ozaa1          78 YAGRKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT  156 (335)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEEC
T ss_pred             ccCCCEEEEEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccc
Confidence               2222         56666665432 346999999999999999999999999999999999999986   5689999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      |||+++.........           +..++..+.+|+..  ..+++++|+||+|++++++++|..|+.
T Consensus       157 DFG~a~~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~  214 (335)
T d2ozaa1         157 DFGFAKETTSHNSLT-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  214 (335)
T ss_dssp             CCTTCEECCCCCCCC-----------CCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCE
T ss_pred             ccceeeeccCCCccc-----------cccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCC
Confidence            999997665432211           11223333444444  458899999999999999999987764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=7.1e-38  Score=259.01  Aligned_cols=185  Identities=21%  Similarity=0.261  Sum_probs=143.2

Q ss_pred             ccccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccC-CCCeE-Ee----
Q psy7935          13 ASDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCR-MADIC-LD----   84 (260)
Q Consensus        13 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~-~~----   84 (260)
                      ...+.|++++.||+|+||+||+|++.  |+.||||++....           .+++.+|+++++.++ ||||+ ++    
T Consensus        32 ~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----------~~~~~~Ei~il~~l~~hpnIv~~~~~~~  100 (328)
T d3bqca1          32 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRGGPNIITLADIVK  100 (328)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----------HHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             CCCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----------HHHHHHHHHHHHhccCCCCCcEEEEEEE
Confidence            34567999999999999999999984  8999999864211           356889999999995 99999 32    


Q ss_pred             CCCchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccC-CcEEEEeecccccc
Q psy7935          85 DVQKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSD-HHLVMIDFGLSQIK  160 (260)
Q Consensus        85 ~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~-~~~kl~DFg~~~~~  160 (260)
                      ......++.+++|+.+..+   .+.+++..+..++.|++.||+|||++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus       101 ~~~~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         101 DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             CTTTCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             ecCCCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceec
Confidence            2334445667888776655   3468999999999999999999999999999999999999974 46999999999766


Q ss_pred             cccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         161 VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       161 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......           ...++..+.+|+..   ..++.++|+||+|++++++++|+.|+.
T Consensus       181 ~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~  231 (328)
T d3bqca1         181 HPGQEYN-----------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  231 (328)
T ss_dssp             CTTCCCC-----------SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred             cCCCccc-----------ccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCC
Confidence            5433221           11122223344433   346889999999999999999988764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-38  Score=255.95  Aligned_cols=224  Identities=15%  Similarity=0.162  Sum_probs=160.9

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-   82 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-   82 (260)
                      ++...+.|++.+.||+|+||.||+|.++       +..||||++....       .......+.+|+.++++++||||+ 
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-------~~~~~~~~~~E~~il~~l~h~nIv~   87 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNCHHVVR   87 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHGGGCCCTTBCC
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-------ChHHHHHHHHHHHHHHHcCCCCEee
Confidence            4556678999999999999999999874       4689999853211       111245789999999999999999 


Q ss_pred             EeC----CCchhh-------hhHHHhhccCcc-------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEc
Q psy7935          83 LDD----VQKSAI-------QTLISNLDSQNI-------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILS  144 (260)
Q Consensus        83 ~~~----~~~~~~-------~~l~~~l~~~~~-------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~  144 (260)
                      +++    .....+       |+|.+++.....       ...+++..+..++.|++.||.|||+++|+||||||+|||++
T Consensus        88 ~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld  167 (308)
T d1p4oa_          88 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA  167 (308)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC
T ss_pred             eeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec
Confidence            322    222222       556665543211       12367788899999999999999999999999999999999


Q ss_pred             cCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeecccccc----
Q psy7935         145 SDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVSTEDKA----  217 (260)
Q Consensus       145 ~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~----  217 (260)
                      .++++||+|||+++..........         .+...+++.| +|+..  ..+++++|+||||++++|++|+..|    
T Consensus       168 ~~~~~Kl~DFGla~~~~~~~~~~~---------~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~  238 (308)
T d1p4oa_         168 EDFTVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG  238 (308)
T ss_dssp             TTCCEEECCTTCCCGGGGGGCEEG---------GGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             CCceEEEeecccceeccCCcceee---------ccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCC
Confidence            999999999999976644322110         0111233444 34333  5688899999999999999987532    


Q ss_pred             -----------------------ccHHHHHHHHHhhccccCCccHHHHHHHHHHhcc
Q psy7935         218 -----------------------VDFRDMFNWILSSYRRQNRKQFETVMKTFAEVEL  251 (260)
Q Consensus       218 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~~  251 (260)
                                             ..+.+++.+|+...+.. ||++.++++.|++...
T Consensus       239 ~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~-RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         239 LSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM-RPSFLEIISSIKEEME  294 (308)
T ss_dssp             SCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHGGGSC
T ss_pred             CCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhH-CcCHHHHHHHHHHhcC
Confidence                                   22557777777766665 5677777777765533

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-38  Score=259.80  Aligned_cols=214  Identities=15%  Similarity=0.152  Sum_probs=152.2

Q ss_pred             ccCcceeeccCCceeEEEEEEcCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC----Cc--h
Q psy7935          17 VLQPAECFKQGAEGRIFKTEYLGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV----QK--S   89 (260)
Q Consensus        17 ~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~----~~--~   89 (260)
                      .+.+.+.||+|+||.||+|+++|+.||||++..+.     .    .......|+..+.+++||||+ +++.    ..  .
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~-----~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----E----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG-----H----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc-----h----hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcce
Confidence            45667899999999999999999999999863221     1    122344566677788999999 3332    11  1


Q ss_pred             hh---------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh--------CCceecCCCCCcEEEccCCcEEEE
Q psy7935          90 AI---------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS--------NNIIHGDLTTSNMILSSDHHLVMI  152 (260)
Q Consensus        90 ~~---------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~--------~~i~H~dlkp~Nill~~~~~~kl~  152 (260)
                      .+         ++|.++++..    .+++.....++.|++.||+|||+        +||+||||||+|||++.++.+||+
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~  150 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  150 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEEEEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE
Confidence            12         5565665443    47888888999999999999996        599999999999999999999999


Q ss_pred             eecccccccccccccccccccccceeeeeeeeeecCcccc--------ccccccceeEeecceeeeeccccccc------
Q psy7935         153 DFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--------QSYNHHLVMIDFGLSQIKVSTEDKAV------  218 (260)
Q Consensus       153 DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~di~s~g~~~~~~~~~~~~~------  218 (260)
                      |||+++......+....  ...    ...++..+++|+.+        ..++.++|+||||+++||++||..|+      
T Consensus       151 DFGl~~~~~~~~~~~~~--~~~----~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~  224 (303)
T d1vjya_         151 DLGLAVRHDSATDTIDI--APN----HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             CCTTCEEEETTTTEECC----------CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             ecCccccccCCCcceec--ccc----ceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccc
Confidence            99999876544321110  001    11222233344333        23678999999999999999885321      


Q ss_pred             -----------------------------------------cHHHHHHHHHhhccccCCccHHHHHHHHHHhc
Q psy7935         219 -----------------------------------------DFRDMFNWILSSYRRQNRKQFETVMKTFAEVE  250 (260)
Q Consensus       219 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~l~~~~  250 (260)
                                                               .+.+++.+|+...+.. ||++.++++.|.++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~-Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         225 QLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA-RLTALRIKKTLSQLS  296 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGG-SCCHHHHHHHHHHHH
T ss_pred             ccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhH-CcCHHHHHHHHHHHH
Confidence                                                     1346777777766665 679999999888775

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=253.69  Aligned_cols=222  Identities=18%  Similarity=0.183  Sum_probs=152.0

Q ss_pred             cccccccCcceeeccCCceeEEEEEEc---------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCe
Q psy7935          12 EASDMVLQPAECFKQGAEGRIFKTEYL---------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADI   81 (260)
Q Consensus        12 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i   81 (260)
                      +.+.+.|++.+.||+|+||.||+|++.         +..||||++....      .. .....+.+|...+.++ +||||
T Consensus         9 ~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~------~~-~~~~~~~~e~~~l~~~~~HpnI   81 (299)
T d1fgka_           9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA------TE-KDLSDLISEMEMMKMIGKHKNI   81 (299)
T ss_dssp             BCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC------CH-HHHHHHHHHHHHHHHHCCCTTB
T ss_pred             cccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc------Ch-HHHHHHHHHHHHHHHhcCCCeE
Confidence            456678999999999999999999873         2479999753221      11 1245688888888888 79999


Q ss_pred             E-E----eCCCchhh-------hhHHHhhccCcc-------------cccchHHHHHHHHHHHHHHHHHhhhCCceecCC
Q psy7935          82 C-L----DDVQKSAI-------QTLISNLDSQNI-------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDL  136 (260)
Q Consensus        82 ~-~----~~~~~~~~-------~~l~~~l~~~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dl  136 (260)
                      + +    .+....++       ++|.+++.....             ...+++..++.++.|++.||+|||+++|+||||
T Consensus        82 v~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDi  161 (299)
T d1fgka_          82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDL  161 (299)
T ss_dssp             CCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             EecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeee
Confidence            9 2    22221221       666666644321             235899999999999999999999999999999


Q ss_pred             CCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccc
Q psy7935         137 TTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTE  214 (260)
Q Consensus       137 kp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~  214 (260)
                      ||+|||++.++.+||+|||+++............        ...++..+.+|+.+  ..+++++|+||||+++++++++
T Consensus       162 Kp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~--------~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~  233 (299)
T d1fgka_         162 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT--------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL  233 (299)
T ss_dssp             SGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCT--------TSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             cccceeecCCCCeEeccchhhccccccccccccc--------cCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccC
Confidence            9999999999999999999998765543222111        11112223344433  6789999999999999999984


Q ss_pred             -ccccc--------------------------HHHHHHHHHhhccccCCccHHHHHHHHHHh
Q psy7935         215 -DKAVD--------------------------FRDMFNWILSSYRRQNRKQFETVMKTFAEV  249 (260)
Q Consensus       215 -~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~il~~l~~~  249 (260)
                       ..|+.                          +.+++.+|++..+.. |+++.++++.|+++
T Consensus       234 g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~-Rps~~eil~~L~~i  294 (299)
T d1fgka_         234 GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQ-RPTFKQLVEDLDRI  294 (299)
T ss_dssp             SCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGG-SCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhH-CcCHHHHHHHHHHH
Confidence             43322                          456666666655555 45666666666554

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.2e-38  Score=256.14  Aligned_cols=191  Identities=15%  Similarity=0.118  Sum_probs=135.5

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCCc
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQK   88 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~~   88 (260)
                      +++|++.+.||+|+||.||+|++.  |+.||||++..+..          ...+..|+++++.++|+|++    .+....
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~   75 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQGGVGIPTIRWCGAEG   75 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT----------SCCHHHHHHHHHHSTTSTTCCCEEEEEEET
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc----------CHHHHHHHHHHHHccCCCcccEEEEEEecC
Confidence            356888999999999999999984  89999998654321          12467899999999887766    111112


Q ss_pred             hhhhhHHHhhccCcc------cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc---CCcEEEEeeccccc
Q psy7935          89 SAIQTLISNLDSQNI------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS---DHHLVMIDFGLSQI  159 (260)
Q Consensus        89 ~~~~~l~~~l~~~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~---~~~~kl~DFg~~~~  159 (260)
                      .....+++++.+...      ...+++..+..++.|++.||+|||++||+||||||+|||++.   +..+||+|||+|+.
T Consensus        76 ~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~  155 (299)
T d1ckia_          76 DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK  155 (299)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred             CEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCccee
Confidence            222223333322111      346899999999999999999999999999999999999864   56799999999987


Q ss_pred             ccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc
Q psy7935         160 KVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       160 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      ...........+...   .+..++..+.+|+..  ..+++++|+||||++++++++|..|+
T Consensus       156 ~~~~~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~  213 (299)
T d1ckia_         156 YRDARTHQHIPYREN---KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW  213 (299)
T ss_dssp             CBCTTTCCBCCCCBC---CSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ccccccccceecccc---CCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcc
Confidence            765443222111111   112222333344433  45889999999999999999998775

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-37  Score=257.08  Aligned_cols=187  Identities=19%  Similarity=0.242  Sum_probs=133.9

Q ss_pred             cccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-----EeCC
Q psy7935          14 SDMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-----LDDV   86 (260)
Q Consensus        14 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-----~~~~   86 (260)
                      ..++|++++.||+|+||.||+|++.  |+.||||++.....      .....+.+.+|++++++++||||+     +...
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~   89 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ------SELFAKRAYRELRLLKHMRHENVIGLLDVFTPD   89 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS------SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc------ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccC
Confidence            4567999999999999999999984  89999998643221      112346789999999999999999     2222


Q ss_pred             Cch----hhhhHHHhhccCcc----cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecccc
Q psy7935          87 QKS----AIQTLISNLDSQNI----TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQ  158 (260)
Q Consensus        87 ~~~----~~~~l~~~l~~~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~  158 (260)
                      ...    .++.+++|+.....    ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+|++|||+|+
T Consensus        90 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~  169 (346)
T d1cm8a_          90 ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR  169 (346)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ccccccceEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhccccccccccccccee
Confidence            111    12333444321100    2358999999999999999999999999999999999999999999999999997


Q ss_pred             cccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         159 IKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       159 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      .......             ...++..+.+|+..   ..++.++|+||+|++++++++|..|+.
T Consensus       170 ~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~  220 (346)
T d1cm8a_         170 QADSEMT-------------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFK  220 (346)
T ss_dssp             ECCSSCC-------------SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ccCCccc-------------cccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCC
Confidence            6543321             11222234445543   457899999999999999999987764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-37  Score=252.33  Aligned_cols=191  Identities=17%  Similarity=0.199  Sum_probs=141.0

Q ss_pred             ccccccccCcceeeccCCceeEEEEEEc-------CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhccc-CCCCeE
Q psy7935          11 TEASDMVLQPAECFKQGAEGRIFKTEYL-------GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKC-RMADIC   82 (260)
Q Consensus        11 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~   82 (260)
                      ++.+.+.+++.+.||+|+||.||+|++.       ++.||||++....       .......+.+|+.+++++ +||||+
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~~~~~l~~HpnIv   90 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNHMNIV   90 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-------CHHHHHHHHHHHHHHHhccCCCCEE
Confidence            3455677899999999999999999863       4689999864321       111245789999999999 699999


Q ss_pred             -EeC----CCchhh-------hhHHHhhccCcc---------------cccchHHHHHHHHHHHHHHHHHhhhCCceecC
Q psy7935          83 -LDD----VQKSAI-------QTLISNLDSQNI---------------TRENISDIIKLLSIEIGTTLSVMHSNNIIHGD  135 (260)
Q Consensus        83 -~~~----~~~~~~-------~~l~~~l~~~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~d  135 (260)
                       +++    ....++       ++|.+++.....               ...+++..+..++.||+.||+|||+++++|||
T Consensus        91 ~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrD  170 (311)
T d1t46a_          91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRD  170 (311)
T ss_dssp             CEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             EEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence             322    222222       566666543210               22488899999999999999999999999999


Q ss_pred             CCCCcEEEccCCcEEEEeecccccccccccccccccccccceeeeeeeeeec-Ccccc--ccccccceeEeecceeeeec
Q psy7935         136 LTTSNMILSSDHHLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCW-SKGTL--QSYNHHLVMIDFGLSQIKVS  212 (260)
Q Consensus       136 lkp~Nill~~~~~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~di~s~g~~~~~~~  212 (260)
                      |||+|||++.++.+|++|||+++...........         +...+++.| +|+..  ..++.++|+||||+++++++
T Consensus       171 LKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ell  241 (311)
T d1t46a_         171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVK---------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF  241 (311)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEEC---------SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccCcccccccchheeccCCCcceEe---------eecccChHHcCHHHhcCCCCCCcccccchHHHHHHHH
Confidence            9999999999999999999999876543322111         122334444 44434  56899999999999999999


Q ss_pred             ccccc
Q psy7935         213 TEDKA  217 (260)
Q Consensus       213 ~~~~~  217 (260)
                      |+..|
T Consensus       242 t~g~p  246 (311)
T d1t46a_         242 SLGSS  246 (311)
T ss_dssp             TTTCC
T ss_pred             hCCCC
Confidence            85543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-38  Score=259.22  Aligned_cols=225  Identities=17%  Similarity=0.193  Sum_probs=161.4

Q ss_pred             cccCcceeeccCCceeEEEEEE-----cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-CCeE-----Ee
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY-----LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-ADIC-----LD   84 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~-----~~   84 (260)
                      +.|++++.||+|+||.||+|++     +|+.||||++.........    ...+.+.+|++++++++| |||+     +.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~----~~~~~~~~E~~il~~l~h~pnIv~~~~~~~   99 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKA----KTTEHTRTERQVLEHIRQSPFLVTLHYAFQ   99 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEE----SSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccch----HHHHHHHHHHHHHHhccCCCeEEEeeeeec
Confidence            5689999999999999999987     3788999986543321111    013457899999999987 7888     22


Q ss_pred             CCCchhh-------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccc
Q psy7935          85 DVQKSAI-------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLS  157 (260)
Q Consensus        85 ~~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~  157 (260)
                      +....++       ++|.+++....   .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++
T Consensus       100 ~~~~~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_         100 TETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             ETTEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             cCCceeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccch
Confidence            2222222       56666665432   5778888999999999999999999999999999999999999999999999


Q ss_pred             ccccccccccccccccccceeeeeeeeeecCcccc----ccccccceeEeecceeeeecccccccc-------HHHHHHH
Q psy7935         158 QIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL----QSYNHHLVMIDFGLSQIKVSTEDKAVD-------FRDMFNW  226 (260)
Q Consensus       158 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~di~s~g~~~~~~~~~~~~~~-------~~~~~~~  226 (260)
                      +...........         +..+...+.+++..    ..++.++||||+||+++++++|..|+.       ...+...
T Consensus       177 ~~~~~~~~~~~~---------~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~  247 (322)
T d1vzoa_         177 KEFVADETERAY---------DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR  247 (322)
T ss_dssp             EECCGGGGGGGC---------GGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHH
T ss_pred             hhhccccccccc---------ccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            766443322111         11122233344433    347789999999999999999998875       2333343


Q ss_pred             HHhhc---cccCCccHHHHHHHHHHhccccccc
Q psy7935         227 ILSSY---RRQNRKQFETVMKTFAEVELRGRKR  256 (260)
Q Consensus       227 ~~~~~---~~~~~~~~~~il~~l~~~~~~~r~~  256 (260)
                      .....   +...++.+.+++++|.+.++..|..
T Consensus       248 ~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s  280 (322)
T d1vzoa_         248 ILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG  280 (322)
T ss_dssp             HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred             cccCCCCCcccCCHHHHHHHHHHcccCHHHcCC
Confidence            33322   2344667889999999999999974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-37  Score=255.52  Aligned_cols=181  Identities=20%  Similarity=0.237  Sum_probs=136.5

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE----EeCCC--
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC----LDDVQ--   87 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~----~~~~~--   87 (260)
                      ++|++++.||+|+||+||+|++  +|+.||||++.....      .....+.+.+|++++++++|||++    ++...  
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~   91 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ------SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS   91 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc------ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccc
Confidence            4589999999999999999998  499999998643221      112245788999999999999999    22111  


Q ss_pred             ----c-hhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeecc
Q psy7935          88 ----K-SAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGL  156 (260)
Q Consensus        88 ----~-~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~  156 (260)
                          . .++      ++|.+++..+    .+++..++.++.|++.||+|||++||+||||||+|||++.++.+|++|||+
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~  167 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL  167 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC--
T ss_pred             cccCceEEEEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccch
Confidence                1 111      7788877654    489999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccccccccceeeeeeeeeecCcccc---ccccccceeEeecceeeeecccccccc
Q psy7935         157 SQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL---QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       157 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +........             +..++..+++++..   ..++.++|+||+|++++++++|..|+.
T Consensus       168 a~~~~~~~~-------------~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~  220 (348)
T d2gfsa1         168 ARHTDDEMT-------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP  220 (348)
T ss_dssp             --CCTGGGS-------------SSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred             hcccCcccc-------------cccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCC
Confidence            865533221             11122223344433   346889999999999999999988864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=254.30  Aligned_cols=187  Identities=19%  Similarity=0.212  Sum_probs=135.7

Q ss_pred             cccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCCCCeE-EeCC------
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRMADIC-LDDV------   86 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~------   86 (260)
                      +.|++++.||+|+||+||+|++.  |+.||||++......      .....++.+|+.++++++||||+ +++.      
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~------~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~   90 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN------QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT   90 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSS------HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcC------HHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc
Confidence            46999999999999999999984  999999987544321      22346789999999999999999 2221      


Q ss_pred             --CchhhhhHHHhhccCcc---cccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          87 --QKSAIQTLISNLDSQNI---TRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        87 --~~~~~~~l~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                        ....++.+++|+.+..+   ...+++..++.++.|++.||.|||++||+||||||+|||++.++.+|++|||+++...
T Consensus        91 ~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          91 LEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             TTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             cccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccc
Confidence              11233456666654322   3458999999999999999999999999999999999999999999999999987654


Q ss_pred             ccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         162 STEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       162 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      ......           ...++..+.+|+..  ..+++++||||+||+++++++|+.|+.
T Consensus       171 ~~~~~~-----------~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~  219 (355)
T d2b1pa1         171 TSFMMT-----------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP  219 (355)
T ss_dssp             ---------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred             cccccc-----------cccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCC
Confidence            432111           11122233344443  558899999999999999999998863

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1e-35  Score=242.10  Aligned_cols=190  Identities=14%  Similarity=0.154  Sum_probs=134.9

Q ss_pred             ccccCcceeeccCCceeEEEEEEc--CccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-CCeE-----EeCC
Q psy7935          15 DMVLQPAECFKQGAEGRIFKTEYL--GRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-ADIC-----LDDV   86 (260)
Q Consensus        15 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~-----~~~~   86 (260)
                      .+.|++.+.||+|+||.||+|++.  |+.||||++.....          ...+.+|++.+..+.| +|++     +...
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   73 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAGCTGIPNVYYFGQEG   73 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC----------cHHHHHHHHHHHHhcCCCCCCEEEEEeecC
Confidence            456788999999999999999984  89999998643321          1235667777777765 6665     1111


Q ss_pred             Cchhh------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEcc-----CCcEEEEeec
Q psy7935          87 QKSAI------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSS-----DHHLVMIDFG  155 (260)
Q Consensus        87 ~~~~~------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~-----~~~~kl~DFg  155 (260)
                      ...++      ++|.+++...  ...++...+..++.|++.||+|||++||+||||||+|||++.     ++.+||+|||
T Consensus        74 ~~~~~vme~~~~~l~~~~~~~--~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG  151 (293)
T d1csna_          74 LHNVLVIDLLGPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  151 (293)
T ss_dssp             TEEEEEEECCCCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             CccEEEEEecCCCHHHHHHhh--ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccc
Confidence            22222      4555555432  346889999999999999999999999999999999999974     5789999999


Q ss_pred             ccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeecccccccc
Q psy7935         156 LSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAVD  219 (260)
Q Consensus       156 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~~  219 (260)
                      +|+.............   ....++.++..+.+|+..  ..+++++|+||+|++++++++|..|+.
T Consensus       152 ~a~~~~~~~~~~~~~~---~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~  214 (293)
T d1csna_         152 MVKFYRDPVTKQHIPY---REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ  214 (293)
T ss_dssp             TCEESBCTTTCCBCCC---CCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             eeEEcccCccccceee---cccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCC
Confidence            9987654432211110   011122233333444444  458899999999999999999998874

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.6e-31  Score=222.17  Aligned_cols=181  Identities=17%  Similarity=0.117  Sum_probs=126.3

Q ss_pred             cccCcceeeccCCceeEEEEEE--cCccEEEEEeecccCCCchhhHHHHHHHHHHHHhhhcccCC-----------CCeE
Q psy7935          16 MVLQPAECFKQGAEGRIFKTEY--LGRSVLVKERFSKKYRHPKLDEALTKERITSEIRGLMKCRM-----------ADIC   82 (260)
Q Consensus        16 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-----------~~i~   82 (260)
                      ++|++++.||+|+||.||+|++  +|+.||||++....     .    ..+.+.+|+.+++.+.|           +||+
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-----~----~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv   83 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-----V----YTEAAEDEIKLLQRVNDADNTKEDSMGANHIL   83 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-----H----HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-----c----chHHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence            4699999999999999999998  48999999864321     1    13456788888877765           5555


Q ss_pred             -EeCCC----chh--h--------hhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCcEEEccC
Q psy7935          83 -LDDVQ----KSA--I--------QTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHS-NNIIHGDLTTSNMILSSD  146 (260)
Q Consensus        83 -~~~~~----~~~--~--------~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~-~~i~H~dlkp~Nill~~~  146 (260)
                       +++..    ...  .        +....+..... ...+++..++.++.|++.||+|||+ +||+||||||+|||++.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~  162 (362)
T d1q8ya_          84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV  162 (362)
T ss_dssp             CCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEE
T ss_pred             EEEEEeeeccccceeeeeeeccccccccccccccc-ccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeecc
Confidence             22111    000  0        11111111111 3458889999999999999999998 899999999999999875


Q ss_pred             C------cEEEEeecccccccccccccccccccccceeeeeeeeeecCcccc--ccccccceeEeecceeeeeccccccc
Q psy7935         147 H------HLVMIDFGLSQIKVSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTL--QSYNHHLVMIDFGLSQIKVSTEDKAV  218 (260)
Q Consensus       147 ~------~~kl~DFg~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~di~s~g~~~~~~~~~~~~~  218 (260)
                      +      .++++|||.+.........             ..+...+.+|+..  ..+++++|+||+|++++++++|..|+
T Consensus       163 ~~~~~~~~~kl~dfg~s~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF  229 (362)
T d1q8ya_         163 DSPENLIQIKIADLGNACWYDEHYTN-------------SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF  229 (362)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBCCCS-------------CCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred             CcccccceeeEeeccccccccccccc-------------ccccccccChhhccccCCCccccccchHHHHHHHHHCCCCC
Confidence            4      4999999998754432211             1111222333333  45789999999999999999998876


Q ss_pred             c
Q psy7935         219 D  219 (260)
Q Consensus       219 ~  219 (260)
                      .
T Consensus       230 ~  230 (362)
T d1q8ya_         230 E  230 (362)
T ss_dssp             -
T ss_pred             C
Confidence            5

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=4.6e-26  Score=173.38  Aligned_cols=138  Identities=18%  Similarity=0.134  Sum_probs=102.7

Q ss_pred             cceeeccCCceeEEEEEE-cCccEEEEEeecccCC--------Cc--hhhHHHHHHHHHHHHhhhcccCCCCeE-EeCCC
Q psy7935          20 PAECFKQGAEGRIFKTEY-LGRSVLVKERFSKKYR--------HP--KLDEALTKERITSEIRGLMKCRMADIC-LDDVQ   87 (260)
Q Consensus        20 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~--------~~--~~~~~~~~~~~~~e~~~l~~~~h~~i~-~~~~~   87 (260)
                      +.++||+|+||.||+|++ +|++||||++......        ..  ............+|...+.++.|++++ .++..
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            468999999999999998 5899999975432110        00  001122345567788999999999888 54444


Q ss_pred             chhhhhHHHhhccCcccccchHHHHHHHHHHHHHHHHHhhhCCceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935          88 KSAIQTLISNLDSQNITRENISDIIKLLSIEIGTTLSVMHSNNIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus        88 ~~~~~~l~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      ...+  +++++.+.. ...++......++.|++.+++|||++||+||||||+|||++. ..++|+|||.|....
T Consensus        84 ~~~l--vme~~~~~~-~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~~  153 (191)
T d1zara2          84 GNAV--LMELIDAKE-LYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEVG  153 (191)
T ss_dssp             TTEE--EEECCCCEE-GGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEETT
T ss_pred             CCEE--EEEeecccc-ccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC-CCEEEEECCCcccCC
Confidence            4444  778877655 334556666779999999999999999999999999999996 458999999987654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.04  E-value=2.5e-06  Score=65.85  Aligned_cols=29  Identities=34%  Similarity=0.462  Sum_probs=25.3

Q ss_pred             ceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ++|+|+.|.|||+++++.+.|+||+.+..
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEeeccCcceeecCCceEEEeechhccc
Confidence            68999999999999876677999998754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.78  E-value=1e-05  Score=66.40  Aligned_cols=31  Identities=29%  Similarity=0.401  Sum_probs=26.2

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQIKV  161 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~~~  161 (260)
                      .++|+|+.|.|||++.+ .++|+||..+..-+
T Consensus       224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a~~G~  254 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH-ETKVIDPEFAFYGP  254 (392)
T ss_dssp             EEECSCCCGGGEEECSS-CEEECCCTTCEEEC
T ss_pred             ceeccCCcCCceeEcCC-ceEEechhhcccCC
Confidence            59999999999999975 58999998876433

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.76  E-value=1.7e-05  Score=62.92  Aligned_cols=31  Identities=29%  Similarity=0.405  Sum_probs=27.5

Q ss_pred             CCceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         129 NNIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       129 ~~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      .|++|+|+.++|++++.+...-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcccccceeEeccccccc
Confidence            3799999999999999887778999998853

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.72  E-value=1.8e-05  Score=60.50  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=25.2

Q ss_pred             ceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         131 IIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       131 i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      ++|+|+.|.|||++.+..+-|+||+.+..
T Consensus       177 liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             EEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            59999999999999876678999998754

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00043  Score=54.88  Aligned_cols=28  Identities=18%  Similarity=0.332  Sum_probs=23.2

Q ss_pred             CceecCCCCCcEEEccCCcEEEEeeccccc
Q psy7935         130 NIIHGDLTTSNMILSSDHHLVMIDFGLSQI  159 (260)
Q Consensus       130 ~i~H~dlkp~Nill~~~~~~kl~DFg~~~~  159 (260)
                      +++|+|+.|.|||+++ + ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESS-S-EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeC-C-ceEEechhccc
Confidence            6899999999999974 3 45899998753

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.73  E-value=0.001  Score=54.02  Aligned_cols=18  Identities=17%  Similarity=0.200  Sum_probs=15.6

Q ss_pred             ceeeccCCceeEEEEEEc
Q psy7935          21 AECFKQGAEGRIFKTEYL   38 (260)
Q Consensus        21 ~~~lg~G~~g~V~~~~~~   38 (260)
                      ++.|+.|-...+|++...
T Consensus        47 v~~l~GGltN~~y~v~~~   64 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLS   64 (395)
T ss_dssp             EEEECCCTTEEEEEEEEC
T ss_pred             EEEcCCccccceEEEEeC
Confidence            678999999999999863

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.18  E-value=0.0028  Score=48.65  Aligned_cols=85  Identities=12%  Similarity=0.054  Sum_probs=56.5

Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      .+..+|+|++|..++.++++.+||..........+.  ..-+...........|..+.+++.+|+...+..|+.++.+++
T Consensus       191 ~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~  268 (277)
T d1o6ya_         191 VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH--VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR  268 (277)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH--HHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred             CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHH--HhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHH
Confidence            356789999999999999999998654321110000  000000111122234566899999999998998777999999


Q ss_pred             HHHHHhc
Q psy7935         244 KTFAEVE  250 (260)
Q Consensus       244 ~~l~~~~  250 (260)
                      +.|.++.
T Consensus       269 ~~l~r~~  275 (277)
T d1o6ya_         269 ADLVRVH  275 (277)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.005  Score=47.18  Aligned_cols=80  Identities=15%  Similarity=0.139  Sum_probs=51.7

Q ss_pred             cccccccccccceeeeee-eeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++++.+ +.+||..........+..  .-+.. .+ .....|..+.+++.+|+...|.. ||++.++.
T Consensus       192 ~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~--~~~~~-~~-~~~~~~~~l~~li~~cl~~dp~~-RPt~~ei~  266 (273)
T d1u46a_         192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID--KEGER-LP-RPEDCPQDIYNVMVQCWAHKPED-RPTFVALR  266 (273)
T ss_dssp             EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--TSCCC-CC-CCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHH--hCCCC-CC-CcccccHHHHHHHHHHcCCChhH-CcCHHHHH
Confidence            456899999999999885 677775443322111110  01110 01 12234566899999999977777 68999998


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.|.+.
T Consensus       267 ~~L~~~  272 (273)
T d1u46a_         267 DFLLEA  272 (273)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            887653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.65  E-value=0.0084  Score=45.95  Aligned_cols=79  Identities=10%  Similarity=0.030  Sum_probs=50.9

Q ss_pred             cccccccccccceeeeee-eeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++++.+ +.+||.............   -|.. .. .....|.++.+++.+|+...+.. ||++.++.
T Consensus       188 ~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~---~~~~-~~-~p~~~~~~~~~li~~cl~~dp~~-RPs~~~i~  261 (277)
T d1xbba_         188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE---KGER-MG-CPAGCPREMYDLMNLCWTYDVEN-RPGFAAVE  261 (277)
T ss_dssp             EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TTCC-CC-CCTTCCHHHHHHHHHHTCSSTTT-SCCHHHHH
T ss_pred             CchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHH---cCCC-CC-CCcccCHHHHHHHHHHcCCCHhH-CcCHHHHH
Confidence            467899999999999875 677775432211111000   0100 01 12334566899999999977776 67999998


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.|.+.
T Consensus       262 ~~L~~~  267 (277)
T d1xbba_         262 LRLRNY  267 (277)
T ss_dssp             HHHHHH
T ss_pred             HHhhCH
Confidence            888754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.37  E-value=0.0091  Score=45.97  Aligned_cols=79  Identities=9%  Similarity=0.054  Sum_probs=50.7

Q ss_pred             cccccccccccceeeeee-eeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++.+.+ +.+||............   .-|.. .+ .....|.++.+++.+|+...|.. ||++.++.
T Consensus       190 ~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i---~~~~~-~~-~p~~~~~~l~~li~~cl~~~p~~-RPs~~~i~  263 (285)
T d1u59a_         190 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI---EQGKR-ME-CPPECPPELYALMSDCWIYKWED-RPDFLTVE  263 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH---HTTCC-CC-CCTTCCHHHHHHHHHTTCSSGGG-SCCHHHHH
T ss_pred             CccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH---HcCCC-CC-CCCcCCHHHHHHHHHHcCCCHhH-CcCHHHHH
Confidence            457899999999999775 67777543221110000   00100 01 12234566899999999977776 68999999


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.|++.
T Consensus       264 ~~L~~~  269 (285)
T d1u59a_         264 QRMRAC  269 (285)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            988765

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.29  E-value=0.018  Score=43.87  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=49.3

Q ss_pred             cccccccccccceeeeeee-eeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVV-AYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++.+.++ .+++............   .-|..  .......|.++.+++.+|++..+.. ||++.+++
T Consensus       188 ~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i---~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~-Rpt~~ei~  261 (272)
T d1qpca_         188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL---ERGYR--MVRPDNCPEELYQLMRLCWKERPED-RPTFDYLR  261 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH---HTTCC--CCCCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH---HhcCC--CCCcccChHHHHHHHHHHcCCCHhH-CcCHHHHH
Confidence            4568999999999998874 4444332221111000   00100  0112234566899999999977777 68999999


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.|+++
T Consensus       262 ~~L~~~  267 (272)
T d1qpca_         262 SVLEDF  267 (272)
T ss_dssp             HHHHHH
T ss_pred             HHhhhh
Confidence            988765

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.05  E-value=0.028  Score=43.77  Aligned_cols=25  Identities=4%  Similarity=0.082  Sum_probs=20.3

Q ss_pred             cccccccccccceeeeee-eeeecCc
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSK  189 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~  189 (260)
                      +..+|+|++|..++.+.+ +.++|..
T Consensus       191 ~~~sDvwS~Gvil~el~t~g~~p~~~  216 (317)
T d1xkka_         191 THQSDVWSYGVTVWELMTFGSKPYDG  216 (317)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ChhhhhhhHHHHHHHHHHCCCCCCCC
Confidence            567899999999999886 6666654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.01  E-value=0.019  Score=44.88  Aligned_cols=78  Identities=10%  Similarity=0.060  Sum_probs=49.0

Q ss_pred             cccccccccccceeeeee-eeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIV-VAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++.+.+ +.+||..........+  +..-+.. .. .....|.++.+++.+|+...|.. ||++.+++
T Consensus       244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~--~~~~~~~-~~-~p~~~~~~l~~li~~cl~~dP~~-RPt~~ei~  318 (325)
T d1rjba_         244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK--LIQNGFK-MD-QPFYATEEIYIIMQSCWAFDSRK-RPSFPNLT  318 (325)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH--HHHTTCC-CC-CCTTCCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHH--HHhcCCC-CC-CCCcCCHHHHHHHHHHcCCChhH-CcCHHHHH
Confidence            567899999999999885 6777654222110000  0000000 00 11234566899999999977776 68999999


Q ss_pred             HHHH
Q psy7935         244 KTFA  247 (260)
Q Consensus       244 ~~l~  247 (260)
                      +.|.
T Consensus       319 ~~L~  322 (325)
T d1rjba_         319 SFLG  322 (325)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9885

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.70  E-value=0.014  Score=44.43  Aligned_cols=76  Identities=11%  Similarity=0.227  Sum_probs=47.5

Q ss_pred             ccccccccccccceeeeeeeeeecCcccccc-ccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQS-YNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETV  242 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  242 (260)
                      .+..+|+|++|..++.+.++.+||....... ...+.   .-|..... .....++++.+++.+|+...+.. |+++.|+
T Consensus       189 ~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i---~~~~~~~~-~~~~~~~~~~~li~~~l~~dp~~-R~s~~el  263 (270)
T d1t4ha_         189 YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---TSGVKPAS-FDKVAIPEVKEIIEGCIRQNKDE-RYSIKDL  263 (270)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---TTTCCCGG-GGGCCCHHHHHHHHHHSCSSGGG-SCCHHHH
T ss_pred             CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHH---HcCCCCcc-cCccCCHHHHHHHHHHccCCHhH-CcCHHHH
Confidence            3567899999999999999998885432110 00000   00000000 11223455899999999977876 6788888


Q ss_pred             HH
Q psy7935         243 MK  244 (260)
Q Consensus       243 l~  244 (260)
                      ++
T Consensus       264 l~  265 (270)
T d1t4ha_         264 LN  265 (270)
T ss_dssp             HT
T ss_pred             hC
Confidence            75

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.16  E-value=0.023  Score=43.21  Aligned_cols=75  Identities=9%  Similarity=0.127  Sum_probs=48.9

Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      .+..+|+|++|..++.+.++.+||..........+..   -+-  +.......+.++.+++.+|+...+.. |+++.+++
T Consensus       191 ~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~---~~~--~~~~~~~~s~~l~~li~~~L~~dp~~-Rps~~ell  264 (269)
T d2java1         191 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR---EGK--FRRIPYRYSDELNEIITRMLNLKDYH-RPSVEEIL  264 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH---HTC--CCCCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHH---cCC--CCCCCcccCHHHHHHHHHHcCCChhH-CcCHHHHH
Confidence            3567899999999999999998886543322111100   000  00112234566899999999977776 67888886


Q ss_pred             H
Q psy7935         244 K  244 (260)
Q Consensus       244 ~  244 (260)
                      +
T Consensus       265 ~  265 (269)
T d2java1         265 E  265 (269)
T ss_dssp             T
T ss_pred             h
Confidence            4

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.87  E-value=0.025  Score=42.81  Aligned_cols=74  Identities=19%  Similarity=0.197  Sum_probs=48.8

Q ss_pred             ccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      .+..+|+|++|..++.+.++.+||..........+.-  . +  ... .....+.+..+++.+|+...|.. |+++.+++
T Consensus       181 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~--~-~--~~~-~p~~~s~~~~~li~~~L~~dp~~-R~t~~eil  253 (263)
T d2j4za1         181 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--R-V--EFT-FPDFVTEGARDLISRLLKHNPSQ-RPMLREVL  253 (263)
T ss_dssp             CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH--T-T--CCC-CCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHH--c-C--CCC-CCccCCHHHHHHHHHHccCCHhH-CcCHHHHH
Confidence            3578899999999999999999986543321111000  0 0  000 11223466899999999977777 57988887


Q ss_pred             H
Q psy7935         244 K  244 (260)
Q Consensus       244 ~  244 (260)
                      +
T Consensus       254 ~  254 (263)
T d2j4za1         254 E  254 (263)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.66  E-value=0.033  Score=42.66  Aligned_cols=22  Identities=14%  Similarity=0.101  Sum_probs=17.6

Q ss_pred             cccccccccccceeeeeeeeee
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYC  186 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~  186 (260)
                      +..+|+|++|..++.+.++..+
T Consensus       194 ~~k~DiwS~Gv~l~ell~~~~p  215 (287)
T d1opja_         194 SIKSDVWAFGVLLWEIATYGMS  215 (287)
T ss_dssp             SHHHHHHHHHHHHHHHHTTSCC
T ss_pred             CchhhhhhHHHHHHHHHhCCCC
Confidence            5678999999999998874443

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.30  E-value=0.028  Score=43.62  Aligned_cols=124  Identities=14%  Similarity=0.089  Sum_probs=63.9

Q ss_pred             HHHHHHHHhhh----CCceecCCC-CCcEEEccCCcEEEEeeccc--ccc------------ccccccccccccccccee
Q psy7935         118 EIGTTLSVMHS----NNIIHGDLT-TSNMILSSDHHLVMIDFGLS--QIK------------VSTEDKAVDLYVLKRNLT  178 (260)
Q Consensus       118 ~i~~~l~~LH~----~~i~H~dlk-p~Nill~~~~~~kl~DFg~~--~~~------------~~~~~~~~d~~~~~~~~~  178 (260)
                      +-+.....+|.    .+|+-.... ..++-+..-|.++..+-+-.  ...            ....+..+|+|++|..++
T Consensus       121 ~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvily  200 (307)
T d1a06a_         121 KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAY  200 (307)
T ss_dssp             HHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred             HhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHH
Confidence            33444566673    356543322 23455655555555443211  011            122356889999999999


Q ss_pred             eeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         179 TIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      .+.++.+||..........+.  ..-....-.......|+++.+++.+|+...|.. |+++.++++
T Consensus       201 ell~g~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~-R~s~~eil~  263 (307)
T d1a06a_         201 ILLCGYPPFYDENDAKLFEQI--LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEK-RFTCEQALQ  263 (307)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHH--HTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGG-SCCHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHH--hccCCCCCCccccCCCHHHHHHHHHHccCCHhH-CcCHHHHhc
Confidence            999999998654332111000  000000000011234566899999999977776 678888876

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.99  E-value=0.063  Score=41.24  Aligned_cols=81  Identities=10%  Similarity=-0.079  Sum_probs=48.0

Q ss_pred             ccccccccccccceeeeeeeeeecCcccccc---------ccccceeEeec------------ceeeeeccccccccHHH
Q psy7935         164 EDKAVDLYVLKRNLTTIIVVAYCWSKGTLQS---------YNHHLVMIDFG------------LSQIKVSTEDKAVDFRD  222 (260)
Q Consensus       164 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~di~s~g------------~~~~~~~~~~~~~~~~~  222 (260)
                      .+..+|+|++|..++.+.++.++|.......         ..+....|...            ....+-.....+....+
T Consensus       192 y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  271 (305)
T d1blxa_         192 YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKD  271 (305)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHH
T ss_pred             CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHH
Confidence            3678899999999999999999886542110         00011111100            00011111122344788


Q ss_pred             HHHHHHhhccccCCccHHHHHHH
Q psy7935         223 MFNWILSSYRRQNRKQFETVMKT  245 (260)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~il~~  245 (260)
                      ++.+|+...|.. |+++.|+++.
T Consensus       272 li~~mL~~dP~~-R~sa~e~L~H  293 (305)
T d1blxa_         272 LLLKCLTFNPAK-RISAYSALSH  293 (305)
T ss_dssp             HHHHHSCSSTTT-SCCHHHHHTS
T ss_pred             HHHHHCcCChhH-CcCHHHHhcC
Confidence            999999976766 6788888753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.70  E-value=0.023  Score=43.63  Aligned_cols=76  Identities=11%  Similarity=0.064  Sum_probs=47.0

Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      +..+|+|++|..++.+.++.+||..........+.-   -+-..........+.++.+++.+|+...+.. |+++.++++
T Consensus       193 ~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~---~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~-R~t~~ell~  268 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA---KSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA-RWTTSQLLQ  268 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH---HSCCCCCSSGGGSCHHHHHHHHHHSCSSTTT-SCCHHHHTT
T ss_pred             ChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---cCCCCCCCccccCCHHHHHHHHHHccCChhH-CcCHHHHhc
Confidence            456899999999999999998886543211100000   0000000011233456899999999977776 678888765

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.24  E-value=0.05  Score=41.64  Aligned_cols=79  Identities=10%  Similarity=0.089  Sum_probs=49.8

Q ss_pred             cccccccccccceeeeeee-eeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVV-AYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVM  243 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il  243 (260)
                      +..+|+|++|..++.+.++ .+++.............   -+.. . ......|..+.+++.+|++..+.. |+++.+++
T Consensus       192 ~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~---~~~~-~-~~~~~~~~~l~~li~~cl~~dP~~-Rps~~~i~  265 (285)
T d1fmka3         192 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE---RGYR-M-PCPPECPESLHDLMCQCWRKEPEE-RPTFEYLQ  265 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH---TTCC-C-CCCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHH
T ss_pred             CcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH---hcCC-C-CCCcccCHHHHHHHHHHcccCHhH-CcCHHHHH
Confidence            4678999999999998764 44444332211111100   0100 0 122334566899999999977776 78999999


Q ss_pred             HHHHHh
Q psy7935         244 KTFAEV  249 (260)
Q Consensus       244 ~~l~~~  249 (260)
                      +.|.+.
T Consensus       266 ~~L~~~  271 (285)
T d1fmka3         266 AFLEDY  271 (285)
T ss_dssp             HHHHTT
T ss_pred             HHHhhh
Confidence            888764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.00  E-value=0.043  Score=43.08  Aligned_cols=79  Identities=13%  Similarity=0.148  Sum_probs=46.3

Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccc-eeEeecceee-eeccccccccHHHHHHHHHhhccccCCccHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHL-VMIDFGLSQI-KVSTEDKAVDFRDMFNWILSSYRRQNRKQFETV  242 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-di~s~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  242 (260)
                      +..+|+|++|..++.+.++.+||............ ...-.+-..+ .......+.++.+++.+|+...+.. |+++.++
T Consensus       191 ~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~-R~s~~ei  269 (335)
T d2ozaa1         191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ-RMTITEF  269 (335)
T ss_dssp             SHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTT-SCCHHHH
T ss_pred             CHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhH-CcCHHHH
Confidence            46789999999999999999988554321111000 0000000000 0011123455889999999977776 6788888


Q ss_pred             HH
Q psy7935         243 MK  244 (260)
Q Consensus       243 l~  244 (260)
                      ++
T Consensus       270 l~  271 (335)
T d2ozaa1         270 MN  271 (335)
T ss_dssp             HH
T ss_pred             Hc
Confidence            76

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.82  E-value=0.03  Score=43.48  Aligned_cols=75  Identities=16%  Similarity=0.123  Sum_probs=47.2

Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      +..+|+|++|..++.+.++.++|..........+.  .. + ....+.....+..+.+++.+|+...|.. |+++.++++
T Consensus       192 ~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i--~~-~-~~~~~~~~~~s~~~~~li~~~L~~dP~~-Rpt~~ell~  266 (309)
T d1u5ra_         192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQ-N-ESPALQSGHWSEYFRNFVDSCLQKIPQD-RPTSEVLLK  266 (309)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH--HH-S-CCCCCSCTTSCHHHHHHHHHHTCSSGGG-SCCHHHHTT
T ss_pred             CchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH--Hh-C-CCCCCCCCCCCHHHHHHHHHHCcCChhH-CcCHHHHHh
Confidence            45689999999999999998887543221100000  00 0 0011122334566899999999977776 678888764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.73  E-value=0.069  Score=41.21  Aligned_cols=24  Identities=13%  Similarity=0.115  Sum_probs=18.2

Q ss_pred             cccccccccccceeeeeee-eeecC
Q psy7935         165 DKAVDLYVLKRNLTTIIVV-AYCWS  188 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~-~~~~~  188 (260)
                      +..+|+|++|..++.+.++ .+++.
T Consensus       213 ~~~~Dv~S~G~il~El~t~~~~p~~  237 (308)
T d1p4oa_         213 TTYSDVWSFGVVLWEIATLAEQPYQ  237 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             CcccccccHHHHHHHHHhCCCCCCC
Confidence            4567999999999988765 35554

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.42  E-value=0.034  Score=42.83  Aligned_cols=146  Identities=16%  Similarity=0.143  Sum_probs=76.8

Q ss_pred             hHHHhhccCcccccchHHHHHHHHH--HHHHHHHHhhh----CCceecCCCCCcEEEccCCcEEEEeecc---cccc---
Q psy7935          93 TLISNLDSQNITRENISDIIKLLSI--EIGTTLSVMHS----NNIIHGDLTTSNMILSSDHHLVMIDFGL---SQIK---  160 (260)
Q Consensus        93 ~l~~~l~~~~~~~~~~~~~~~~i~~--~i~~~l~~LH~----~~i~H~dlkp~Nill~~~~~~kl~DFg~---~~~~---  160 (260)
                      +|.+++..+.+....-...+..++.  +-+.....+|.    .+|+-.+  -.++-|..-|.++..+-+-   ....   
T Consensus       103 ~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~--~~~vkl~DFG~a~~~~~~~~~~~~~~gt~  180 (293)
T d1yhwa1         103 SLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKRSTMVGTP  180 (293)
T ss_dssp             BHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT--TCCEEECCCTTCEECCSTTCCBCCCCSCG
T ss_pred             cHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECC--CCcEeeccchhheeeccccccccccccCC
Confidence            4555665555433333333334433  33444667774    3554321  1356665545444332111   0100   


Q ss_pred             ---------cccccccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhc
Q psy7935         161 ---------VSTEDKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSY  231 (260)
Q Consensus       161 ---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (260)
                               ....+..+|+|++|..++.+.++.+||...........  +..-+..... .....+..+.+++.+|+...
T Consensus       181 ~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~--~~~~~~~~~~-~~~~~s~~~~~li~~~L~~d  257 (293)
T d1yhwa1         181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL--IATNGTPELQ-NPEKLSAIFRDFLNRCLDMD  257 (293)
T ss_dssp             GGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HHHHCSCCCS-SGGGSCHHHHHHHHHHTCSS
T ss_pred             CccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHH--HHhCCCCCCC-CcccCCHHHHHHHHHHccCC
Confidence                     12235678999999999999999998865432110000  0000000011 11223456899999999977


Q ss_pred             cccCCccHHHHHH
Q psy7935         232 RRQNRKQFETVMK  244 (260)
Q Consensus       232 ~~~~~~~~~~il~  244 (260)
                      +.. |+++.++++
T Consensus       258 P~~-R~s~~eil~  269 (293)
T d1yhwa1         258 VEK-RGSAKELLQ  269 (293)
T ss_dssp             TTT-SCCHHHHTT
T ss_pred             hhH-CcCHHHHhc
Confidence            776 678888765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=82.02  E-value=0.06  Score=42.47  Aligned_cols=78  Identities=6%  Similarity=-0.010  Sum_probs=48.7

Q ss_pred             cccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      +..+|+|++|..++.+.++.++|..........+.  -+.....-.......+.++.+++.+|+...+.. |+++.++++
T Consensus       203 ~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~-R~t~~eil~  279 (350)
T d1koaa2         203 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV--KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT-RMTIHQALE  279 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--HHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGG-SCCHHHHHH
T ss_pred             ChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHH--HhCCCCCCcccccCCCHHHHHHHHHHccCChhH-CcCHHHHhc
Confidence            46789999999999999999988654321111100  000000001111234456899999999977776 678888876


Q ss_pred             H
Q psy7935         245 T  245 (260)
Q Consensus       245 ~  245 (260)
                      .
T Consensus       280 h  280 (350)
T d1koaa2         280 H  280 (350)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=81.72  E-value=0.032  Score=44.15  Aligned_cols=124  Identities=8%  Similarity=0.018  Sum_probs=69.6

Q ss_pred             HHHHHHHHhhh----CCceecCCCCCcEEEccCCcEEEEe--------ecccccc------cccccccccccccccceee
Q psy7935         118 EIGTTLSVMHS----NNIIHGDLTTSNMILSSDHHLVMID--------FGLSQIK------VSTEDKAVDLYVLKRNLTT  179 (260)
Q Consensus       118 ~i~~~l~~LH~----~~i~H~dlkp~Nill~~~~~~kl~D--------Fg~~~~~------~~~~~~~~d~~~~~~~~~~  179 (260)
                      +-+.....+|.    .+|+-..-+..++-|..-|.++..+        .|.....      ....+..+|+|++|..++.
T Consensus       141 ~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye  220 (352)
T d1koba_         141 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYV  220 (352)
T ss_dssp             HHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHH
Confidence            33444566774    4676543344567666545444432        1111111      1223567899999999999


Q ss_pred             eeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         180 IIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      +.++.++|..........+.  .......-.......+.++.+++.+|+...+.. |+++.++++
T Consensus       221 lltG~~Pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~-R~s~~eil~  282 (352)
T d1koba_         221 LLSGLSPFAGEDDLETLQNV--KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK-RLTVHDALE  282 (352)
T ss_dssp             HHHSCCSSCCSSHHHHHHHH--HHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGG-SCCHHHHHT
T ss_pred             HHhCCCCCCCCCHHHHHHHH--HhCCCCCCcccccCCCHHHHHHHHHHccCChhH-CcCHHHHhc
Confidence            99999998654332111000  000000011112234566899999999977776 678888865

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.43  E-value=0.084  Score=39.90  Aligned_cols=66  Identities=12%  Similarity=0.215  Sum_probs=46.4

Q ss_pred             ccccccccccceeeeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         166 KAVDLYVLKRNLTTIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       166 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      ..+|+|++|..++.+.++.+||....... .        +...   .....+.+..+++.+|+...+.. |+++.|+++
T Consensus       189 ~~~DiwSlGvilyell~g~~Pf~~~~~i~-~--------~~~~---~~~~~s~~~~~li~~~L~~dp~~-R~s~~eil~  254 (273)
T d1xwsa_         189 RSAAVWSLGILLYDMVCGDIPFEHDEEII-R--------GQVF---FRQRVSSECQHLIRWCLALRPSD-RPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCSHHHHH-H--------CCCC---CSSCCCHHHHHHHHHHTCSSGGG-SCCHHHHHT
T ss_pred             cccccccceeeehhHhhCCCCCCCchHHh-h--------cccC---CCCCCCHHHHHHHHHHccCCHhH-CcCHHHHhc
Confidence            45799999999999999998886432100 0        0000   12234567999999999977776 579888875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.59  E-value=0.03  Score=43.04  Aligned_cols=123  Identities=12%  Similarity=0.068  Sum_probs=67.5

Q ss_pred             HHHHHHHhhh----CCceec--CCCCCcEEEccCCcEEEEeeccccc--c------------ccccccccccccccccee
Q psy7935         119 IGTTLSVMHS----NNIIHG--DLTTSNMILSSDHHLVMIDFGLSQI--K------------VSTEDKAVDLYVLKRNLT  178 (260)
Q Consensus       119 i~~~l~~LH~----~~i~H~--dlkp~Nill~~~~~~kl~DFg~~~~--~------------~~~~~~~~d~~~~~~~~~  178 (260)
                      -+.....+|.    .+|+-.  +....++-+..-|.++..+.+-...  .            ....+..+|+|++|..++
T Consensus       128 yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvily  207 (293)
T d1jksa_         128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITY  207 (293)
T ss_dssp             HHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred             hhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHH
Confidence            3444555663    344332  2223356666656666655432211  1            112356789999999999


Q ss_pred             eeeeeeeecCccccccccccceeEeecceeeeeccccccccHHHHHHHHHhhccccCCccHHHHHH
Q psy7935         179 TIIVVAYCWSKGTLQSYNHHLVMIDFGLSQIKVSTEDKAVDFRDMFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~di~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      .+.++.+||..........+  +-..............+....+++.+|+...+.. |+++.++++
T Consensus       208 ell~g~~Pf~~~~~~~~~~~--i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~-R~s~~eil~  270 (293)
T d1jksa_         208 ILLSGASPFLGDTKQETLAN--VSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKK-RMTIQDSLQ  270 (293)
T ss_dssp             HHHHSSCSSCCSSHHHHHHH--HHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGG-SCCHHHHHH
T ss_pred             HHHcCCCCCCCCCHHHHHHH--HHhcCCCCCchhcCCCCHHHHHHHHHHccCChhH-CcCHHHHhc
Confidence            99999998865432111000  0000000000011223455889999999977776 678888875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.53  E-value=0.096  Score=40.06  Aligned_cols=79  Identities=9%  Similarity=-0.003  Sum_probs=46.3

Q ss_pred             cccccccccccceeeeeeeeeecCcccccc---------ccccceeE----eec---------ceeeeeccccccccHHH
Q psy7935         165 DKAVDLYVLKRNLTTIIVVAYCWSKGTLQS---------YNHHLVMI----DFG---------LSQIKVSTEDKAVDFRD  222 (260)
Q Consensus       165 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~di~----s~g---------~~~~~~~~~~~~~~~~~  222 (260)
                      +..+|+|++|..++.+.++.++|.......         .++....|    +..         -..+.-.....+.+..+
T Consensus       179 ~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  258 (299)
T d1ua2a_         179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLD  258 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHH
T ss_pred             ChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHH
Confidence            457899999999999999988875432110         00000111    000         00000011122345889


Q ss_pred             HHHHHHhhccccCCccHHHHHH
Q psy7935         223 MFNWILSSYRRQNRKQFETVMK  244 (260)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~il~  244 (260)
                      ++.+|+...+.. |+++.|+++
T Consensus       259 ll~~~L~~dP~~-R~sa~e~L~  279 (299)
T d1ua2a_         259 LIQGLFLFNPCA-RITATQALK  279 (299)
T ss_dssp             HHHHHHCSSTTT-SCCHHHHHT
T ss_pred             HHHHHccCChhh-CcCHHHHhC
Confidence            999999977776 788888875