RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7937
         (152 letters)



>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
           {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
          Length = 653

 Score = 24.1 bits (52), Expect = 9.6
 Identities = 10/65 (15%), Positives = 22/65 (33%), Gaps = 6/65 (9%)

Query: 13  FPGPTSHAHRLCVQRRQRRVLDTSSTY--VRGEENLHGWRPRGDSLIFDHQWELEKLTRL 70
           +       H    +RR +  L+ +ST+     E+     R +   L    +    K+   
Sbjct: 416 YKISPDQFHVFNQKRRGKITLNATSTHDTKFSEDV----RMKISVLSEFPEEWKNKVEEW 471

Query: 71  QAVER 75
            ++  
Sbjct: 472 HSIIN 476


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0587    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 547,746
Number of extensions: 22340
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 74
Effective length of database: 1,336,656
Effective search space: 98912544
Effective search space used: 98912544
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.0 bits)