Query psy7938
Match_columns 305
No_of_seqs 254 out of 2720
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 22:40:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uem_A Protein disulfide-isome 100.0 9.3E-40 3.2E-44 296.0 26.9 249 5-281 81-359 (361)
2 3idv_A Protein disulfide-isome 100.0 3.4E-35 1.2E-39 251.0 11.2 223 15-281 14-239 (241)
3 3f8u_A Protein disulfide-isome 100.0 1.5E-29 5.1E-34 237.4 27.4 279 6-292 176-474 (481)
4 1a8l_A Protein disulfide oxido 100.0 4.3E-31 1.5E-35 223.6 13.1 193 36-277 25-224 (226)
5 2b5e_A Protein disulfide-isome 100.0 8.7E-30 3E-34 240.4 19.6 264 9-281 186-469 (504)
6 3apo_A DNAJ homolog subfamily 100.0 9.8E-30 3.4E-34 251.8 16.0 192 34-278 456-655 (780)
7 2ywm_A Glutaredoxin-like prote 100.0 2.2E-29 7.4E-34 213.6 10.1 184 41-278 33-219 (229)
8 3apo_A DNAJ homolog subfamily 100.0 8.4E-29 2.9E-33 245.1 12.0 192 36-280 566-768 (780)
9 2hls_A Protein disulfide oxido 99.9 3.9E-27 1.3E-31 201.6 12.8 197 34-283 26-230 (243)
10 3us3_A Calsequestrin-1; calciu 99.9 9.8E-26 3.4E-30 204.3 9.9 207 15-279 12-227 (367)
11 1sji_A Calsequestrin 2, calseq 99.9 5.3E-25 1.8E-29 198.3 9.0 205 16-279 11-225 (350)
12 2r2j_A Thioredoxin domain-cont 99.9 1E-23 3.6E-28 192.1 9.8 209 16-278 5-217 (382)
13 3ed3_A Protein disulfide-isome 99.9 9.7E-24 3.3E-28 185.7 8.7 208 16-278 17-266 (298)
14 3f8u_A Protein disulfide-isome 99.9 9.8E-23 3.3E-27 191.0 8.0 205 17-279 2-217 (481)
15 3q6o_A Sulfhydryl oxidase 1; p 99.9 3.4E-22 1.2E-26 171.0 10.0 226 11-278 7-239 (244)
16 3h79_A Thioredoxin-like protei 99.9 3.3E-21 1.1E-25 148.0 12.5 108 171-278 14-127 (127)
17 3zzx_A Thioredoxin; oxidoreduc 99.8 3.8E-20 1.3E-24 137.3 11.6 99 174-277 2-104 (105)
18 3t58_A Sulfhydryl oxidase 1; o 99.8 9.3E-21 3.2E-25 178.0 9.8 225 11-278 7-239 (519)
19 2b5e_A Protein disulfide-isome 99.8 9.3E-21 3.2E-25 178.6 9.7 200 15-279 13-220 (504)
20 2djj_A PDI, protein disulfide- 99.8 6.2E-20 2.1E-24 139.4 11.5 111 170-281 5-119 (121)
21 2dj3_A Protein disulfide-isome 99.8 1.2E-19 4.2E-24 140.1 11.2 113 170-282 5-121 (133)
22 2qsi_A Putative hydrogenase ex 99.8 8.6E-20 2.9E-24 140.2 7.9 103 173-278 16-122 (137)
23 2av4_A Thioredoxin-like protei 99.8 5.6E-19 1.9E-23 137.8 11.4 103 174-278 23-138 (160)
24 3evi_A Phosducin-like protein 99.8 1.5E-18 5.2E-23 131.2 13.4 103 172-279 3-114 (118)
25 3gnj_A Thioredoxin domain prot 99.8 7.9E-19 2.7E-23 131.0 11.8 104 172-278 4-109 (111)
26 2dj1_A Protein disulfide-isome 99.8 9.8E-19 3.4E-23 136.2 12.7 114 170-286 15-131 (140)
27 3uvt_A Thioredoxin domain-cont 99.8 8.4E-19 2.9E-23 130.8 11.8 104 172-278 5-111 (111)
28 2voc_A Thioredoxin; electron t 99.8 1.9E-18 6.5E-23 129.5 13.7 105 174-283 3-109 (112)
29 2qgv_A Hydrogenase-1 operon pr 99.8 1.2E-19 4.1E-24 139.9 6.5 106 174-283 19-129 (140)
30 2trx_A Thioredoxin; electron t 99.8 1.8E-18 6.2E-23 128.4 12.5 102 173-277 3-106 (108)
31 2dml_A Protein disulfide-isome 99.8 5.3E-19 1.8E-23 136.0 9.9 107 171-279 16-124 (130)
32 1x5d_A Protein disulfide-isome 99.8 8E-19 2.7E-23 135.4 9.9 108 171-279 6-117 (133)
33 2i4a_A Thioredoxin; acidophIle 99.8 4.4E-18 1.5E-22 125.9 13.2 102 173-277 3-106 (107)
34 2o8v_B Thioredoxin 1; disulfid 99.8 5.5E-18 1.9E-22 130.2 13.5 103 172-277 22-126 (128)
35 3die_A Thioredoxin, TRX; elect 99.8 4.9E-18 1.7E-22 125.5 12.5 100 173-277 4-105 (106)
36 2l5l_A Thioredoxin; structural 99.8 4.3E-18 1.5E-22 132.2 12.4 112 171-285 8-132 (136)
37 2dbc_A PDCL2, unnamed protein 99.8 6.3E-18 2.1E-22 131.2 13.2 116 171-291 9-133 (135)
38 3hxs_A Thioredoxin, TRXP; elec 99.8 2.9E-18 9.9E-23 133.8 11.3 107 170-279 20-139 (141)
39 1t00_A Thioredoxin, TRX; redox 99.8 5.2E-18 1.8E-22 126.8 11.9 104 172-278 5-110 (112)
40 3hz4_A Thioredoxin; NYSGXRC, P 99.8 3.6E-18 1.2E-22 133.3 11.2 105 171-278 5-111 (140)
41 3ga4_A Dolichyl-diphosphooligo 99.8 3.2E-18 1.1E-22 137.8 10.8 108 172-279 18-153 (178)
42 1w4v_A Thioredoxin, mitochondr 99.8 5.2E-18 1.8E-22 128.6 11.1 105 170-277 11-117 (119)
43 3tco_A Thioredoxin (TRXA-1); d 99.8 1E-17 3.6E-22 124.2 12.5 103 172-278 4-108 (109)
44 1dby_A Chloroplast thioredoxin 99.8 7.6E-18 2.6E-22 124.8 11.4 102 174-278 3-106 (107)
45 3p2a_A Thioredoxin 2, putative 99.8 6.9E-18 2.3E-22 132.9 11.6 104 172-279 38-143 (148)
46 1thx_A Thioredoxin, thioredoxi 99.7 1.1E-17 3.6E-22 125.5 11.8 104 173-279 8-113 (115)
47 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.1E-17 3.7E-22 126.8 11.7 107 170-279 10-118 (121)
48 1mek_A Protein disulfide isome 99.7 4.3E-18 1.5E-22 128.5 9.5 109 171-280 6-118 (120)
49 2ppt_A Thioredoxin-2; thiredox 99.7 7.6E-18 2.6E-22 133.9 11.2 104 172-279 47-152 (155)
50 3dxb_A Thioredoxin N-terminall 99.7 2.2E-17 7.6E-22 139.0 14.5 108 170-280 10-119 (222)
51 3qfa_C Thioredoxin; protein-pr 99.7 6E-18 2.1E-22 127.7 9.9 100 173-277 13-115 (116)
52 1fb6_A Thioredoxin M; electron 99.7 1.7E-17 5.9E-22 122.3 12.0 101 174-277 2-104 (105)
53 1nsw_A Thioredoxin, TRX; therm 99.7 1.8E-17 6.2E-22 122.3 12.0 101 174-278 2-104 (105)
54 4euy_A Uncharacterized protein 99.7 7.4E-18 2.5E-22 124.7 9.5 96 178-278 7-104 (105)
55 1x5e_A Thioredoxin domain cont 99.7 2E-17 6.8E-22 126.5 11.6 105 171-281 6-112 (126)
56 2yzu_A Thioredoxin; redox prot 99.7 2.5E-17 8.5E-22 122.1 11.7 103 173-279 2-106 (109)
57 3aps_A DNAJ homolog subfamily 99.7 6.5E-18 2.2E-22 128.4 8.7 104 173-279 4-113 (122)
58 2pu9_C TRX-F, thioredoxin F-ty 99.7 3.6E-17 1.2E-21 122.2 12.6 102 171-277 4-109 (111)
59 1oaz_A Thioredoxin 1; immune s 99.7 9.7E-18 3.3E-22 128.0 9.5 103 173-278 4-122 (123)
60 2e0q_A Thioredoxin; electron t 99.7 2.3E-17 7.8E-22 121.1 10.8 100 174-278 1-102 (104)
61 3ed3_A Protein disulfide-isome 99.7 3.3E-17 1.1E-21 143.9 13.3 110 170-281 15-144 (298)
62 1gh2_A Thioredoxin-like protei 99.7 3.9E-17 1.3E-21 121.1 11.6 99 174-277 3-105 (107)
63 3f3q_A Thioredoxin-1; His TAG, 99.7 4.6E-17 1.6E-21 121.4 11.3 98 174-277 9-108 (109)
64 1r26_A Thioredoxin; redox-acti 99.7 6.6E-17 2.3E-21 123.7 12.2 100 173-278 20-122 (125)
65 1xwb_A Thioredoxin; dimerizati 99.7 8.2E-17 2.8E-21 118.8 11.9 100 174-277 2-105 (106)
66 3qou_A Protein YBBN; thioredox 99.7 4.7E-17 1.6E-21 142.1 12.2 104 172-278 7-113 (287)
67 2l57_A Uncharacterized protein 99.7 6.6E-17 2.3E-21 123.6 11.5 96 187-284 23-122 (126)
68 3idv_A Protein disulfide-isome 99.7 9.3E-17 3.2E-21 136.4 13.2 109 170-281 13-124 (241)
69 2r2j_A Thioredoxin domain-cont 99.7 2.9E-17 9.9E-22 149.4 10.6 108 173-281 6-119 (382)
70 2vlu_A Thioredoxin, thioredoxi 99.7 7.3E-17 2.5E-21 122.5 11.0 101 173-278 14-119 (122)
71 3uem_A Protein disulfide-isome 99.7 5.5E-16 1.9E-20 139.8 18.5 162 84-278 58-229 (361)
72 2djk_A PDI, protein disulfide- 99.7 7E-19 2.4E-23 136.2 -0.6 109 31-168 21-130 (133)
73 1faa_A Thioredoxin F; electron 99.7 1.4E-16 4.7E-21 121.3 12.2 103 171-278 17-123 (124)
74 1ep7_A Thioredoxin CH1, H-type 99.7 7.3E-17 2.5E-21 120.5 10.4 102 173-278 3-110 (112)
75 3d6i_A Monothiol glutaredoxin- 99.7 8.1E-17 2.8E-21 120.3 10.5 101 174-277 2-107 (112)
76 1v98_A Thioredoxin; oxidoreduc 99.7 7.6E-17 2.6E-21 125.7 10.6 103 172-278 33-137 (140)
77 2xc2_A Thioredoxinn; oxidoredu 99.7 9.7E-17 3.3E-21 121.0 10.5 98 174-277 15-116 (117)
78 2vim_A Thioredoxin, TRX; thior 99.7 1.6E-16 5.6E-21 116.7 11.5 99 174-277 1-103 (104)
79 1xfl_A Thioredoxin H1; AT3G510 99.7 2.1E-16 7.1E-21 120.7 12.4 104 170-278 14-123 (124)
80 3ul3_B Thioredoxin, thioredoxi 99.7 4.1E-17 1.4E-21 125.2 8.4 89 186-277 38-128 (128)
81 3h79_A Thioredoxin-like protei 99.7 1.9E-18 6.4E-23 132.5 0.7 113 12-151 11-126 (127)
82 3gix_A Thioredoxin-like protei 99.7 7.2E-17 2.5E-21 127.3 9.9 98 178-278 10-120 (149)
83 2trc_P Phosducin, MEKA, PP33; 99.7 1.7E-17 5.7E-22 139.0 6.4 129 145-279 74-213 (217)
84 1syr_A Thioredoxin; SGPP, stru 99.7 1.3E-16 4.5E-21 119.3 10.7 101 172-278 9-111 (112)
85 3us3_A Calsequestrin-1; calciu 99.7 9.8E-17 3.3E-21 145.1 11.8 113 165-281 6-126 (367)
86 2wz9_A Glutaredoxin-3; protein 99.7 3.4E-16 1.2E-20 124.0 13.5 107 172-283 12-122 (153)
87 2oe3_A Thioredoxin-3; electron 99.7 1E-16 3.4E-21 120.6 9.7 98 173-276 13-113 (114)
88 2l6c_A Thioredoxin; oxidoreduc 99.7 1.3E-16 4.3E-21 119.2 10.0 101 174-280 5-107 (110)
89 3apq_A DNAJ homolog subfamily 99.7 7.7E-17 2.6E-21 134.5 9.9 106 171-280 96-203 (210)
90 3m9j_A Thioredoxin; oxidoreduc 99.7 2.2E-16 7.5E-21 116.3 11.2 98 175-277 3-104 (105)
91 2qsi_A Putative hydrogenase ex 99.7 3.3E-18 1.1E-22 131.4 1.2 104 17-152 16-122 (137)
92 3zzx_A Thioredoxin; oxidoreduc 99.7 5.6E-18 1.9E-22 125.5 2.2 85 33-151 20-104 (105)
93 3emx_A Thioredoxin; structural 99.7 4.3E-17 1.5E-21 126.4 7.2 103 172-282 16-129 (135)
94 1a0r_P Phosducin, MEKA, PP33; 99.7 8.8E-17 3E-21 136.6 9.6 128 146-279 88-226 (245)
95 1sji_A Calsequestrin 2, calseq 99.7 1.3E-16 4.3E-21 143.5 10.9 107 170-281 9-124 (350)
96 3q6o_A Sulfhydryl oxidase 1; p 99.7 3.7E-16 1.3E-20 133.4 13.1 111 171-282 11-130 (244)
97 2dj0_A Thioredoxin-related tra 99.7 1.3E-17 4.5E-22 129.6 3.4 103 172-276 7-118 (137)
98 2f51_A Thioredoxin; electron t 99.7 2.5E-16 8.7E-21 119.1 9.9 102 174-280 5-114 (118)
99 1qgv_A Spliceosomal protein U5 99.7 4.3E-16 1.5E-20 121.8 11.4 99 178-278 10-120 (142)
100 2es7_A Q8ZP25_salty, putative 99.7 9.7E-17 3.3E-21 125.4 6.6 105 173-282 18-128 (142)
101 1zma_A Bacterocin transport ac 99.7 1.2E-16 4E-21 120.8 6.6 99 174-276 14-118 (118)
102 2qgv_A Hydrogenase-1 operon pr 99.7 3.1E-18 1.1E-22 132.0 -2.2 102 20-153 21-125 (140)
103 2av4_A Thioredoxin-like protei 99.7 6.2E-18 2.1E-22 131.9 -0.6 91 33-155 41-141 (160)
104 2j23_A Thioredoxin; immune pro 99.7 2.3E-16 8E-21 119.8 7.9 103 172-278 15-120 (121)
105 2vm1_A Thioredoxin, thioredoxi 99.6 6.3E-16 2.2E-20 116.3 10.1 103 172-279 6-114 (118)
106 1ti3_A Thioredoxin H, PTTRXH1; 99.6 6.4E-16 2.2E-20 115.4 9.9 102 172-278 4-111 (113)
107 2c0g_A ERP29 homolog, windbeut 99.6 6E-16 2.1E-20 131.6 10.8 102 172-279 16-132 (248)
108 3d22_A TRXH4, thioredoxin H-ty 99.6 9.8E-16 3.4E-20 119.0 10.9 105 170-279 22-132 (139)
109 3cxg_A Putative thioredoxin; m 99.6 3.7E-16 1.3E-20 120.8 8.0 105 170-279 18-129 (133)
110 4f9z_D Endoplasmic reticulum r 99.6 2.1E-15 7.1E-20 127.3 12.9 187 34-277 28-223 (227)
111 2qc7_A ERP31, ERP28, endoplasm 99.6 2.8E-15 9.6E-20 127.0 12.8 102 172-278 5-118 (240)
112 3t58_A Sulfhydryl oxidase 1; o 99.6 3.6E-15 1.2E-19 140.1 14.7 112 171-282 11-130 (519)
113 2yj7_A LPBCA thioredoxin; oxid 99.4 3.2E-17 1.1E-21 120.8 0.0 101 174-277 3-105 (106)
114 3ga4_A Dolichyl-diphosphooligo 99.6 4.9E-17 1.7E-21 130.9 0.7 114 16-153 18-153 (178)
115 2dml_A Protein disulfide-isome 99.6 1E-16 3.5E-21 123.1 1.7 113 9-153 10-124 (130)
116 2dj1_A Protein disulfide-isome 99.6 1.9E-16 6.5E-21 123.2 2.3 112 15-156 16-127 (140)
117 2kuc_A Putative disulphide-iso 99.6 3E-15 1E-19 114.8 8.5 106 174-281 8-123 (130)
118 3gnj_A Thioredoxin domain prot 99.6 7.6E-17 2.6E-21 120.1 -2.2 89 33-153 22-110 (111)
119 3qcp_A QSOX from trypanosoma b 99.6 4.6E-16 1.6E-20 142.9 2.5 100 171-270 22-131 (470)
120 3tco_A Thioredoxin (TRXA-1); d 99.6 2.3E-16 7.9E-21 116.9 0.2 105 16-152 4-108 (109)
121 4euy_A Uncharacterized protein 99.6 1.2E-16 4.2E-21 118.1 -1.6 94 25-151 10-103 (105)
122 1wmj_A Thioredoxin H-type; str 99.6 4.2E-16 1.4E-20 119.5 1.4 108 171-283 13-126 (130)
123 3p2a_A Thioredoxin 2, putative 99.6 3.1E-16 1.1E-20 123.3 0.7 107 16-154 38-144 (148)
124 1wou_A Thioredoxin -related pr 99.6 9.8E-15 3.4E-19 111.1 8.1 99 174-276 7-122 (123)
125 1mek_A Protein disulfide isome 99.5 1.7E-16 5.9E-21 119.6 -1.7 113 12-153 3-117 (120)
126 1x5d_A Protein disulfide-isome 99.5 1.9E-16 6.6E-21 121.9 -1.5 111 16-154 7-118 (133)
127 2trx_A Thioredoxin; electron t 99.5 4.2E-16 1.4E-20 115.5 0.3 104 17-152 3-107 (108)
128 2dj3_A Protein disulfide-isome 99.5 3.7E-16 1.3E-20 120.4 -0.4 113 15-154 6-119 (133)
129 2fwh_A Thiol:disulfide interch 99.5 8.2E-15 2.8E-19 113.2 7.1 103 174-279 13-128 (134)
130 3fk8_A Disulphide isomerase; A 99.5 1.6E-14 5.6E-19 111.2 8.6 88 188-277 27-131 (133)
131 2ppt_A Thioredoxin-2; thiredox 99.5 1.9E-16 6.4E-21 125.8 -2.6 90 32-153 63-152 (155)
132 3uvt_A Thioredoxin domain-cont 99.5 1E-15 3.6E-20 113.8 1.6 106 16-151 5-110 (111)
133 2voc_A Thioredoxin; electron t 99.5 3.7E-16 1.3E-20 116.9 -1.1 102 19-153 4-105 (112)
134 3hz4_A Thioredoxin; NYSGXRC, P 99.5 8.8E-17 3E-21 125.4 -4.8 94 31-156 22-115 (140)
135 3die_A Thioredoxin, TRX; elect 99.5 3.3E-16 1.1E-20 115.5 -1.5 101 18-151 5-105 (106)
136 3qou_A Protein YBBN; thioredox 99.5 1.1E-15 3.9E-20 133.3 1.3 105 17-153 8-114 (287)
137 3ul3_B Thioredoxin, thioredoxi 99.5 8.6E-16 2.9E-20 117.8 -0.1 89 30-150 39-127 (128)
138 1fo5_A Thioredoxin; disulfide 99.5 6.4E-14 2.2E-18 98.9 9.7 80 191-277 3-84 (85)
139 1x5e_A Thioredoxin domain cont 99.5 8.2E-16 2.8E-20 117.4 -0.3 107 16-157 7-114 (126)
140 2o8v_B Thioredoxin 1; disulfid 99.5 6.6E-16 2.2E-20 118.6 -1.0 106 15-152 21-127 (128)
141 2l57_A Uncharacterized protein 99.5 3.8E-15 1.3E-19 113.6 3.2 93 30-154 23-118 (126)
142 3f9u_A Putative exported cytoc 99.5 2.1E-14 7.2E-19 115.7 7.5 101 175-277 29-164 (172)
143 1nsw_A Thioredoxin, TRX; therm 99.5 4.7E-16 1.6E-20 114.6 -2.2 101 19-151 3-103 (105)
144 3hxs_A Thioredoxin, TRXP; elec 99.5 1.9E-15 6.3E-20 117.7 1.1 90 32-153 50-139 (141)
145 1v98_A Thioredoxin; oxidoreduc 99.5 2.6E-15 9E-20 116.8 1.8 107 16-154 33-139 (140)
146 3apq_A DNAJ homolog subfamily 99.5 1.2E-15 4.2E-20 127.2 -0.2 105 18-154 99-203 (210)
147 2djk_A PDI, protein disulfide- 99.5 5.2E-14 1.8E-18 108.6 9.1 101 173-278 7-114 (133)
148 3dml_A Putative uncharacterize 99.5 1.1E-14 3.9E-19 108.6 5.1 86 189-278 17-109 (116)
149 3qfa_C Thioredoxin; protein-pr 99.5 2.3E-15 8E-20 113.3 1.3 86 32-151 30-115 (116)
150 2e0q_A Thioredoxin; electron t 99.5 1.9E-15 6.5E-20 110.7 0.6 101 20-153 3-103 (104)
151 3gix_A Thioredoxin-like protei 99.5 1.9E-15 6.5E-20 119.1 0.6 90 33-154 23-122 (149)
152 2yzu_A Thioredoxin; redox prot 99.5 1E-15 3.5E-20 113.2 -1.0 104 18-153 3-106 (109)
153 1thx_A Thioredoxin, thioredoxi 99.5 1.5E-15 5.1E-20 113.7 -0.1 104 18-153 9-113 (115)
154 1t00_A Thioredoxin, TRX; redox 99.5 1.9E-15 6.5E-20 112.7 0.4 104 18-153 7-111 (112)
155 3aps_A DNAJ homolog subfamily 99.5 5.1E-16 1.7E-20 117.8 -2.9 93 32-153 20-113 (122)
156 2wz9_A Glutaredoxin-3; protein 99.5 3.7E-15 1.3E-19 117.9 1.6 110 33-187 32-141 (153)
157 1nho_A Probable thioredoxin; b 99.5 7.3E-14 2.5E-18 98.6 8.1 80 192-278 3-84 (85)
158 2i4a_A Thioredoxin; acidophIle 99.5 1.2E-15 4.2E-20 112.6 -1.3 103 17-151 3-106 (107)
159 2djj_A PDI, protein disulfide- 99.5 2.3E-15 7.7E-20 113.9 0.2 108 16-153 7-117 (121)
160 2c0g_A ERP29 homolog, windbeut 99.5 1E-14 3.5E-19 123.9 3.9 153 15-220 15-174 (248)
161 1oaz_A Thioredoxin 1; immune s 99.5 1.3E-15 4.5E-20 116.1 -1.8 103 17-151 4-121 (123)
162 3emx_A Thioredoxin; structural 99.5 9.1E-16 3.1E-20 118.9 -2.8 106 15-154 15-127 (135)
163 2es7_A Q8ZP25_salty, putative 99.5 5.5E-15 1.9E-19 115.4 1.0 105 17-154 18-126 (142)
164 2lst_A Thioredoxin; structural 99.2 4.4E-15 1.5E-19 113.9 0.0 96 188-285 17-122 (130)
165 3iv4_A Putative oxidoreductase 99.5 1.7E-13 5.6E-18 101.0 8.0 96 174-274 8-111 (112)
166 1fb6_A Thioredoxin M; electron 99.5 4.8E-15 1.7E-19 109.0 -0.3 88 32-151 17-104 (105)
167 1r26_A Thioredoxin; redox-acti 99.4 2.8E-15 9.6E-20 114.6 -2.0 89 31-153 35-123 (125)
168 3d6i_A Monothiol glutaredoxin- 99.4 4.6E-15 1.6E-19 110.7 -0.9 89 33-153 21-109 (112)
169 1dby_A Chloroplast thioredoxin 99.4 1.3E-14 4.3E-19 107.2 1.4 88 33-152 19-106 (107)
170 2l5l_A Thioredoxin; structural 99.4 1.6E-14 5.5E-19 111.8 1.8 90 32-154 37-127 (136)
171 1ep7_A Thioredoxin CH1, H-type 99.4 1.4E-14 4.8E-19 107.9 1.4 88 33-153 24-111 (112)
172 1gh2_A Thioredoxin-like protei 99.4 2E-14 6.8E-19 106.3 2.1 87 32-152 20-106 (107)
173 3f3q_A Thioredoxin-1; His TAG, 99.4 1.4E-14 4.9E-19 107.7 1.3 86 32-151 23-108 (109)
174 1w4v_A Thioredoxin, mitochondr 99.4 2.6E-14 8.7E-19 108.0 2.6 88 33-152 31-118 (119)
175 2i1u_A Thioredoxin, TRX, MPT46 99.4 3.6E-15 1.2E-19 112.7 -2.2 105 16-152 12-117 (121)
176 2yj7_A LPBCA thioredoxin; oxid 99.2 9.4E-15 3.2E-19 107.4 0.0 100 20-151 5-105 (106)
177 3dxb_A Thioredoxin N-terminall 99.4 4.9E-15 1.7E-19 124.6 -1.8 108 16-155 12-120 (222)
178 3m9j_A Thioredoxin; oxidoreduc 99.4 2E-14 6.8E-19 105.7 1.1 85 33-151 20-104 (105)
179 2l6c_A Thioredoxin; oxidoreduc 99.4 4.9E-15 1.7E-19 110.4 -2.3 88 33-153 19-106 (110)
180 2b5x_A YKUV protein, TRXY; thi 99.4 2.2E-12 7.4E-17 100.4 12.6 102 175-279 15-145 (148)
181 2vlu_A Thioredoxin, thioredoxi 99.4 2.9E-14 9.9E-19 108.0 1.5 87 33-153 34-120 (122)
182 1qgv_A Spliceosomal protein U5 99.4 1.2E-14 4.1E-19 113.6 -0.7 93 33-154 23-122 (142)
183 3evi_A Phosducin-like protein 99.4 2.1E-15 7.2E-20 113.9 -4.9 84 35-151 25-112 (118)
184 2ju5_A Thioredoxin disulfide i 99.4 6.1E-13 2.1E-17 105.2 9.0 96 180-278 34-151 (154)
185 2xc2_A Thioredoxinn; oxidoredu 99.4 1.1E-14 3.7E-19 109.7 -1.3 85 32-151 32-116 (117)
186 3raz_A Thioredoxin-related pro 99.4 1.6E-12 5.4E-17 102.2 10.9 93 189-282 23-143 (151)
187 1lu4_A Soluble secreted antige 99.4 2.1E-12 7E-17 99.2 11.2 86 189-278 23-135 (136)
188 2ywm_A Glutaredoxin-like prote 99.4 6.3E-13 2.1E-17 112.0 9.0 98 180-278 9-114 (229)
189 1z6n_A Hypothetical protein PA 99.4 6.6E-13 2.2E-17 106.3 8.3 91 180-275 44-139 (167)
190 2pu9_C TRX-F, thioredoxin F-ty 99.4 2.7E-14 9.1E-19 106.4 0.1 103 17-152 6-110 (111)
191 1zzo_A RV1677; thioredoxin fol 99.4 2E-12 6.8E-17 99.1 10.6 100 174-278 10-134 (136)
192 3ph9_A Anterior gradient prote 99.4 3.2E-13 1.1E-17 106.2 5.8 95 181-277 32-143 (151)
193 1xwb_A Thioredoxin; dimerizati 99.4 8.6E-14 3E-18 102.3 2.4 87 32-151 19-105 (106)
194 2dj0_A Thioredoxin-related tra 99.4 4.8E-15 1.7E-19 114.9 -4.7 102 17-148 8-116 (137)
195 2lst_A Thioredoxin; structural 99.1 3.5E-14 1.2E-18 108.8 0.0 98 27-154 13-117 (130)
196 2oe3_A Thioredoxin-3; electron 99.4 5.2E-14 1.8E-18 105.6 0.7 85 32-150 29-113 (114)
197 3erw_A Sporulation thiol-disul 99.4 3.1E-12 1.1E-16 99.2 10.9 86 189-275 33-145 (145)
198 1zma_A Bacterocin transport ac 99.4 6E-15 2E-19 111.3 -4.8 88 32-149 28-117 (118)
199 1syr_A Thioredoxin; SGPP, stru 99.4 1.2E-14 4.3E-19 108.5 -3.0 87 31-151 24-110 (112)
200 3kp8_A Vkorc1/thioredoxin doma 99.4 2.2E-13 7.5E-18 100.8 3.7 75 190-278 12-94 (106)
201 2f9s_A Thiol-disulfide oxidore 99.4 4.2E-12 1.4E-16 99.6 11.1 93 189-282 25-141 (151)
202 1xfl_A Thioredoxin H1; AT3G510 99.4 1.7E-13 5.9E-18 104.3 2.9 86 33-152 38-123 (124)
203 1faa_A Thioredoxin F; electron 99.4 5.9E-14 2E-18 106.6 0.3 103 17-152 19-123 (124)
204 3cxg_A Putative thioredoxin; m 99.4 1.6E-13 5.5E-18 105.9 2.6 85 34-153 41-129 (133)
205 3ia1_A THIO-disulfide isomeras 99.4 4.7E-12 1.6E-16 99.6 11.1 89 191-283 31-148 (154)
206 3or5_A Thiol:disulfide interch 99.4 4E-12 1.4E-16 101.0 10.7 106 174-281 19-153 (165)
207 3bj5_A Protein disulfide-isome 99.3 6.6E-12 2.3E-16 98.4 10.9 99 74-172 47-146 (147)
208 1sen_A Thioredoxin-like protei 99.3 9.4E-13 3.2E-17 105.3 6.1 91 188-278 44-147 (164)
209 2j23_A Thioredoxin; immune pro 99.3 1.3E-13 4.5E-18 104.4 0.9 87 33-152 33-120 (121)
210 1ilo_A Conserved hypothetical 99.3 2.2E-12 7.5E-17 89.2 7.1 74 193-274 2-76 (77)
211 2vim_A Thioredoxin, TRX; thior 99.3 1.5E-13 5.1E-18 100.7 1.0 86 32-151 18-103 (104)
212 2h30_A Thioredoxin, peptide me 99.3 2E-12 6.7E-17 102.8 7.0 104 174-279 23-156 (164)
213 3d22_A TRXH4, thioredoxin H-ty 99.3 1.5E-13 5.2E-18 106.5 0.5 88 33-154 46-133 (139)
214 1a8l_A Protein disulfide oxido 99.3 3.3E-12 1.1E-16 107.2 8.6 95 180-277 10-111 (226)
215 4evm_A Thioredoxin family prot 99.3 1.3E-11 4.4E-16 94.5 10.8 87 189-277 21-137 (138)
216 3fk8_A Disulphide isomerase; A 99.3 1.7E-13 5.7E-18 105.5 0.1 92 32-152 28-132 (133)
217 2lja_A Putative thiol-disulfid 99.3 6.5E-12 2.2E-16 98.4 9.3 94 189-283 29-147 (152)
218 3eyt_A Uncharacterized protein 99.3 1.4E-11 4.7E-16 97.3 11.0 91 189-280 27-153 (158)
219 3lor_A Thiol-disulfide isomera 99.3 1.9E-11 6.4E-16 96.7 11.7 91 189-280 29-156 (160)
220 1nho_A Probable thioredoxin; b 99.3 2.3E-13 7.8E-18 96.0 0.5 80 37-152 5-84 (85)
221 2f51_A Thioredoxin; electron t 99.3 3.3E-13 1.1E-17 101.7 1.4 86 33-152 23-112 (118)
222 1fo5_A Thioredoxin; disulfide 99.3 3E-13 1E-17 95.3 0.9 79 37-151 6-84 (85)
223 2vm1_A Thioredoxin, thioredoxi 99.3 3.6E-13 1.2E-17 101.1 1.3 87 33-153 28-114 (118)
224 3qcp_A QSOX from trypanosoma b 99.3 6.1E-14 2.1E-18 128.9 -3.9 117 16-153 23-152 (470)
225 1ti3_A Thioredoxin H, PTTRXH1; 99.3 5E-13 1.7E-17 99.5 1.7 87 33-153 26-112 (113)
226 2kuc_A Putative disulphide-iso 99.3 2.3E-13 7.8E-18 104.2 -0.1 95 33-154 27-122 (130)
227 1un2_A DSBA, thiol-disulfide i 99.3 7.3E-13 2.5E-17 109.0 2.6 118 102-235 38-159 (197)
228 3gl3_A Putative thiol:disulfid 99.3 2.7E-11 9.3E-16 94.8 10.7 95 189-284 27-147 (152)
229 3eur_A Uncharacterized protein 99.3 3.3E-11 1.1E-15 93.5 11.1 84 189-276 30-142 (142)
230 2qc7_A ERP31, ERP28, endoplasm 99.3 5.5E-13 1.9E-17 112.9 0.9 107 16-152 5-118 (240)
231 2dbc_A PDCL2, unnamed protein 99.3 9.4E-13 3.2E-17 101.8 2.1 85 34-151 31-119 (135)
232 2l5o_A Putative thioredoxin; s 99.3 2.2E-11 7.6E-16 95.5 10.0 92 189-281 27-143 (153)
233 2fwh_A Thiol:disulfide interch 99.3 9.8E-13 3.4E-17 101.4 1.9 88 34-152 32-127 (134)
234 3dml_A Putative uncharacterize 99.2 1.8E-13 6.1E-18 102.1 -2.9 95 31-153 16-110 (116)
235 3fkf_A Thiol-disulfide oxidore 99.2 2.9E-11 9.9E-16 94.0 9.7 87 189-278 32-145 (148)
236 3kcm_A Thioredoxin family prot 99.2 5E-11 1.7E-15 93.5 11.0 91 189-280 27-144 (154)
237 2b1k_A Thiol:disulfide interch 99.2 1.7E-11 5.7E-16 97.9 8.1 99 174-277 33-158 (168)
238 3hcz_A Possible thiol-disulfid 99.2 1.6E-11 5.6E-16 95.4 7.9 88 189-277 30-144 (148)
239 3hdc_A Thioredoxin family prot 99.2 7.5E-11 2.6E-15 93.2 11.8 89 189-278 40-151 (158)
240 3ewl_A Uncharacterized conserv 99.2 3.6E-11 1.2E-15 93.1 9.5 86 189-278 26-140 (142)
241 3ira_A Conserved protein; meth 99.2 6E-12 2.1E-16 101.0 5.1 75 179-256 29-116 (173)
242 3kp8_A Vkorc1/thioredoxin doma 99.2 2.2E-12 7.6E-17 95.3 2.1 76 33-149 12-91 (106)
243 1wmj_A Thioredoxin H-type; str 99.2 6.4E-13 2.2E-17 101.5 -1.3 88 33-154 36-123 (130)
244 2fgx_A Putative thioredoxin; N 99.2 2.6E-11 9E-16 89.1 7.1 76 191-274 29-106 (107)
245 1jfu_A Thiol:disulfide interch 99.2 1.1E-10 3.6E-15 94.9 11.2 134 141-280 13-181 (186)
246 3ha9_A Uncharacterized thiored 99.2 9.2E-11 3.2E-15 93.3 10.4 85 189-278 36-163 (165)
247 1wou_A Thioredoxin -related pr 99.2 1.3E-12 4.5E-17 99.2 -0.5 85 33-150 24-122 (123)
248 2lrn_A Thiol:disulfide interch 99.2 1.3E-10 4.6E-15 91.1 10.9 87 189-279 28-141 (152)
249 3lwa_A Secreted thiol-disulfid 99.2 7.8E-11 2.7E-15 95.5 9.8 89 189-278 58-180 (183)
250 1ttz_A Conserved hypothetical 99.2 2.6E-11 8.7E-16 86.1 5.8 73 194-279 3-77 (87)
251 2h8l_A Protein disulfide-isome 99.2 1E-10 3.5E-15 100.0 10.5 162 6-175 72-251 (252)
252 1kng_A Thiol:disulfide interch 99.2 6.4E-11 2.2E-15 93.0 8.5 85 189-277 41-150 (156)
253 1hyu_A AHPF, alkyl hydroperoxi 99.2 3.6E-10 1.2E-14 106.7 14.9 135 116-277 61-198 (521)
254 3ec3_A Protein disulfide-isome 99.2 3.2E-10 1.1E-14 96.8 13.3 162 5-175 72-249 (250)
255 1a0r_P Phosducin, MEKA, PP33; 99.2 1.8E-12 6.1E-17 110.0 -1.0 88 33-151 133-224 (245)
256 2ywi_A Hypothetical conserved 99.2 8.6E-11 2.9E-15 96.2 8.7 93 190-283 45-178 (196)
257 2lrt_A Uncharacterized protein 99.2 1.5E-10 5.1E-15 91.0 9.5 85 190-275 35-144 (152)
258 2cvb_A Probable thiol-disulfid 99.1 2.3E-10 7.9E-15 93.0 10.7 94 189-284 32-164 (188)
259 2dlx_A UBX domain-containing p 99.1 2.2E-10 7.4E-15 90.1 10.0 94 180-276 29-133 (153)
260 3s9f_A Tryparedoxin; thioredox 99.1 1.6E-10 5.6E-15 92.2 9.1 68 189-256 47-141 (165)
261 1i5g_A Tryparedoxin II; electr 99.1 1.8E-10 6.2E-15 89.4 9.2 68 189-256 27-121 (144)
262 3iv4_A Putative oxidoreductase 99.1 2E-12 6.7E-17 95.3 -2.0 85 31-148 22-111 (112)
263 2lja_A Putative thiol-disulfid 99.1 5E-11 1.7E-15 93.3 5.9 116 3-155 6-145 (152)
264 2hyx_A Protein DIPZ; thioredox 99.1 1.7E-10 5.9E-15 103.0 9.7 88 189-277 81-197 (352)
265 1o8x_A Tryparedoxin, TRYX, TXN 99.1 1.8E-10 6.2E-15 89.7 8.6 68 189-256 27-121 (146)
266 1ilo_A Conserved hypothetical 99.1 1.9E-11 6.4E-16 84.4 2.6 72 38-148 4-76 (77)
267 3fkf_A Thiol-disulfide oxidore 99.1 2.6E-11 9E-16 94.3 3.2 114 3-153 8-146 (148)
268 1lu4_A Soluble secreted antige 99.1 1.3E-11 4.4E-16 94.7 1.3 113 5-152 3-135 (136)
269 2trc_P Phosducin, MEKA, PP33; 99.1 2E-12 7E-17 108.0 -3.6 87 34-151 121-211 (217)
270 4f9z_D Endoplasmic reticulum r 99.1 2.1E-10 7E-15 96.5 8.6 148 6-155 74-227 (227)
271 3kh7_A Thiol:disulfide interch 99.1 3.5E-10 1.2E-14 91.2 9.5 85 189-278 57-166 (176)
272 1o73_A Tryparedoxin; electron 99.1 2.9E-10 1E-14 88.1 8.4 68 189-256 27-121 (144)
273 1zzo_A RV1677; thioredoxin fol 99.1 1.9E-11 6.5E-16 93.5 1.4 112 3-152 2-134 (136)
274 2lrn_A Thiol:disulfide interch 99.1 5.1E-11 1.7E-15 93.5 3.8 115 3-156 6-144 (152)
275 3fw2_A Thiol-disulfide oxidore 99.1 7.9E-10 2.7E-14 86.4 10.7 86 189-277 32-146 (150)
276 2hls_A Protein disulfide oxido 99.1 2.3E-10 7.7E-15 97.3 7.8 94 180-277 15-115 (243)
277 3f9u_A Putative exported cytoc 99.1 5.3E-12 1.8E-16 101.5 -2.5 89 33-153 47-166 (172)
278 3erw_A Sporulation thiol-disul 99.1 1.9E-11 6.5E-16 94.7 0.8 108 3-148 12-144 (145)
279 2ju5_A Thioredoxin disulfide i 99.1 2.5E-11 8.6E-16 95.8 1.4 93 33-153 47-152 (154)
280 2h8l_A Protein disulfide-isome 99.1 3.7E-09 1.3E-13 90.2 14.6 163 84-278 47-229 (252)
281 1sen_A Thioredoxin-like protei 99.1 3.5E-12 1.2E-16 101.9 -4.1 95 33-154 46-149 (164)
282 4fo5_A Thioredoxin-like protei 99.0 6.9E-10 2.3E-14 86.0 9.0 84 189-276 31-142 (143)
283 3or5_A Thiol:disulfide interch 99.0 7.6E-11 2.6E-15 93.5 3.4 113 3-154 11-152 (165)
284 2f9s_A Thiol-disulfide oxidore 99.0 2.7E-11 9.3E-16 94.9 0.7 117 3-155 3-140 (151)
285 1z6n_A Hypothetical protein PA 99.0 1.2E-11 4.3E-16 98.9 -1.6 68 35-132 56-127 (167)
286 2b5x_A YKUV protein, TRXY; thi 99.0 1.7E-11 5.8E-16 95.3 -0.9 115 3-154 4-146 (148)
287 2l5o_A Putative thioredoxin; s 99.0 1.1E-10 3.8E-15 91.4 3.4 137 2-158 4-146 (153)
288 2e7p_A Glutaredoxin; thioredox 99.0 1E-10 3.5E-15 87.4 2.5 80 190-279 19-108 (116)
289 3kp9_A Vkorc1/thioredoxin doma 99.0 2.2E-10 7.5E-15 99.2 4.7 76 193-280 200-281 (291)
290 3u5r_E Uncharacterized protein 99.0 1.8E-09 6.2E-14 90.1 10.0 92 190-284 58-192 (218)
291 3ira_A Conserved protein; meth 99.0 3.4E-11 1.2E-15 96.6 -0.7 95 30-151 36-142 (173)
292 2ls5_A Uncharacterized protein 98.5 4.6E-11 1.6E-15 94.5 0.0 90 189-279 32-148 (159)
293 3gl3_A Putative thiol:disulfid 99.0 2.3E-10 8E-15 89.4 3.7 117 2-154 5-143 (152)
294 2rli_A SCO2 protein homolog, m 99.0 3.1E-09 1.1E-13 84.7 9.9 90 189-278 25-163 (171)
295 3ph9_A Anterior gradient prote 99.0 9.6E-12 3.3E-16 97.7 -4.9 75 31-132 42-117 (151)
296 2k6v_A Putative cytochrome C o 99.0 1E-09 3.4E-14 87.6 6.9 88 189-277 34-171 (172)
297 2ggt_A SCO1 protein homolog, m 99.0 4.1E-09 1.4E-13 83.3 10.3 90 189-278 22-160 (164)
298 3hcz_A Possible thiol-disulfid 98.9 7.7E-11 2.6E-15 91.6 -0.1 110 3-151 8-144 (148)
299 3ia1_A THIO-disulfide isomeras 98.9 6.4E-11 2.2E-15 93.0 -0.7 112 3-154 8-145 (154)
300 1ttz_A Conserved hypothetical 98.9 9.7E-11 3.3E-15 83.0 0.2 75 37-153 3-77 (87)
301 3raz_A Thioredoxin-related pro 98.9 2.9E-10 9.9E-15 89.0 2.9 93 34-155 25-142 (151)
302 3ec3_A Protein disulfide-isome 98.9 4.6E-08 1.6E-12 83.3 16.1 162 84-278 48-227 (250)
303 3eur_A Uncharacterized protein 98.9 1.4E-10 4.7E-15 89.9 -0.0 109 3-149 8-141 (142)
304 4evm_A Thioredoxin family prot 98.9 3.7E-10 1.3E-14 86.2 2.3 108 6-150 2-136 (138)
305 3lor_A Thiol-disulfide isomera 98.9 2.9E-10 9.8E-15 89.7 1.7 116 2-154 5-156 (160)
306 3cmi_A Peroxiredoxin HYR1; thi 98.9 3.4E-09 1.2E-13 84.8 8.0 89 189-279 31-168 (171)
307 2lus_A Thioredoxion; CR-Trp16, 98.4 1.6E-10 5.4E-15 89.4 0.0 73 190-263 25-126 (143)
308 3ewl_A Uncharacterized conserv 98.9 1.8E-10 6E-15 89.1 0.2 115 3-152 4-140 (142)
309 3kp9_A Vkorc1/thioredoxin doma 98.9 1.1E-10 3.7E-15 101.1 -1.4 76 34-150 198-277 (291)
310 3kcm_A Thioredoxin family prot 98.9 3.5E-10 1.2E-14 88.6 1.6 118 2-154 4-144 (154)
311 3dwv_A Glutathione peroxidase- 98.9 8E-09 2.7E-13 84.0 9.7 90 189-279 45-183 (187)
312 1wjk_A C330018D20RIK protein; 98.9 3.8E-09 1.3E-13 76.9 6.8 79 189-279 14-96 (100)
313 1i5g_A Tryparedoxin II; electr 98.9 4.7E-10 1.6E-14 87.1 1.9 92 3-128 4-121 (144)
314 2p5q_A Glutathione peroxidase 98.9 5.7E-09 1.9E-13 83.0 8.2 90 189-279 31-168 (170)
315 3eyt_A Uncharacterized protein 98.9 6.2E-10 2.1E-14 87.6 2.5 116 3-154 3-153 (158)
316 2lus_A Thioredoxion; CR-Trp16, 98.4 2.4E-10 8E-15 88.4 0.0 94 5-127 3-119 (143)
317 2vup_A Glutathione peroxidase- 98.9 8.9E-09 3E-13 83.9 9.2 90 189-279 47-185 (190)
318 3fw2_A Thiol-disulfide oxidore 98.9 9E-10 3.1E-14 86.1 3.0 113 3-152 8-147 (150)
319 2v1m_A Glutathione peroxidase; 98.9 6.2E-09 2.1E-13 82.7 8.0 88 189-277 30-165 (169)
320 3hdc_A Thioredoxin family prot 98.8 6.8E-10 2.3E-14 87.6 2.0 113 3-150 18-149 (158)
321 3drn_A Peroxiredoxin, bacterio 98.8 1.9E-08 6.5E-13 79.6 10.3 86 190-276 28-146 (161)
322 3lwa_A Secreted thiol-disulfid 98.8 1.1E-09 3.8E-14 88.6 2.8 121 3-153 34-181 (183)
323 2fgx_A Putative thioredoxin; N 98.8 3.4E-10 1.2E-14 83.2 -0.3 77 35-148 30-106 (107)
324 2p31_A CL683, glutathione pero 98.8 9.4E-09 3.2E-13 83.1 8.2 89 189-278 48-180 (181)
325 1o8x_A Tryparedoxin, TRYX, TXN 98.8 7.9E-10 2.7E-14 86.0 1.7 87 3-124 5-116 (146)
326 3ha9_A Uncharacterized thiored 98.8 7E-10 2.4E-14 88.1 0.9 109 6-153 17-164 (165)
327 2cvb_A Probable thiol-disulfid 98.8 1.4E-09 4.7E-14 88.4 2.5 120 3-156 10-162 (188)
328 2lrt_A Uncharacterized protein 98.8 1.2E-09 4E-14 85.8 2.0 113 2-154 11-146 (152)
329 2b1k_A Thiol:disulfide interch 98.8 3.6E-10 1.2E-14 90.1 -1.2 133 3-153 25-160 (168)
330 2k8s_A Thioredoxin; dimer, str 98.8 3.2E-09 1.1E-13 73.8 3.5 56 193-250 3-61 (80)
331 2bmx_A Alkyl hydroperoxidase C 98.8 1.7E-08 5.9E-13 82.5 8.5 90 189-279 44-170 (195)
332 3u5r_E Uncharacterized protein 98.8 2.1E-09 7.3E-14 89.7 2.7 120 3-156 35-190 (218)
333 1we0_A Alkyl hydroperoxide red 98.8 1.6E-08 5.4E-13 82.1 7.9 89 189-278 30-156 (187)
334 2ywi_A Hypothetical conserved 98.8 7.4E-10 2.5E-14 90.6 -0.1 121 3-155 21-176 (196)
335 2ls5_A Uncharacterized protein 98.2 7.8E-10 2.7E-14 87.3 0.0 118 3-154 10-149 (159)
336 1zof_A Alkyl hydroperoxide-red 98.8 1.4E-08 4.7E-13 83.3 7.5 89 189-278 32-160 (198)
337 2obi_A PHGPX, GPX-4, phospholi 98.8 2.6E-08 8.8E-13 80.5 8.8 87 189-276 46-181 (183)
338 1xvw_A Hypothetical protein RV 98.8 3.5E-08 1.2E-12 77.7 9.3 86 190-276 35-157 (160)
339 1nm3_A Protein HI0572; hybrid, 98.8 4.1E-09 1.4E-13 89.2 4.1 50 193-250 171-225 (241)
340 1kng_A Thiol:disulfide interch 98.7 5.1E-10 1.8E-14 87.8 -1.6 108 33-153 42-152 (156)
341 2f8a_A Glutathione peroxidase 98.7 3.4E-08 1.2E-12 81.8 9.2 88 189-277 46-205 (208)
342 2dlx_A UBX domain-containing p 98.7 4.2E-09 1.4E-13 82.7 3.2 95 31-154 40-137 (153)
343 2h30_A Thioredoxin, peptide me 98.7 1.3E-09 4.4E-14 86.3 -0.2 109 33-153 38-156 (164)
344 1o73_A Tryparedoxin; electron 98.7 1.4E-09 4.6E-14 84.3 -0.6 66 34-124 29-116 (144)
345 3kij_A Probable glutathione pe 98.7 6.1E-08 2.1E-12 78.1 8.7 87 189-276 37-167 (180)
346 1qmv_A Human thioredoxin perox 98.7 7.8E-08 2.7E-12 78.7 9.4 88 189-277 33-161 (197)
347 1ego_A Glutaredoxin; electron 98.7 3E-08 1E-12 69.4 5.9 72 194-277 3-82 (85)
348 1xzo_A BSSCO, hypothetical pro 98.7 1.4E-07 4.8E-12 75.2 10.5 91 189-279 32-172 (174)
349 4fo5_A Thioredoxin-like protei 98.7 1.9E-09 6.6E-14 83.4 -0.8 108 3-149 10-141 (143)
350 3kh7_A Thiol:disulfide interch 98.7 3E-09 1E-13 85.7 0.1 132 3-153 33-167 (176)
351 1jfu_A Thiol:disulfide interch 98.6 1.3E-08 4.6E-13 82.3 3.6 119 3-154 37-181 (186)
352 2gs3_A PHGPX, GPX-4, phospholi 98.6 5.8E-08 2E-12 78.7 7.0 87 189-276 48-183 (185)
353 1wjk_A C330018D20RIK protein; 98.6 8.6E-09 2.9E-13 75.0 1.6 79 35-152 17-95 (100)
354 3s9f_A Tryparedoxin; thioredox 98.6 6.4E-09 2.2E-13 82.8 0.7 68 34-126 49-138 (165)
355 1uul_A Tryparedoxin peroxidase 98.6 1.9E-07 6.4E-12 76.8 8.4 88 189-277 35-163 (202)
356 2h01_A 2-Cys peroxiredoxin; th 98.5 1.8E-07 6E-12 76.2 7.9 88 189-277 30-157 (192)
357 2hyx_A Protein DIPZ; thioredox 98.5 8.3E-09 2.8E-13 92.1 -0.6 92 34-154 83-200 (352)
358 1zye_A Thioredoxin-dependent p 98.5 2.7E-07 9.2E-12 77.0 8.7 87 190-277 56-183 (220)
359 3drn_A Peroxiredoxin, bacterio 98.5 2.4E-08 8E-13 79.0 1.1 117 3-151 5-147 (161)
360 2i81_A 2-Cys peroxiredoxin; st 98.5 4.4E-07 1.5E-11 75.3 8.8 88 189-277 51-178 (213)
361 2b7k_A SCO1 protein; metalloch 98.5 2E-07 6.9E-12 76.5 6.7 90 189-278 40-178 (200)
362 2l4c_A Endoplasmic reticulum r 98.5 8.1E-07 2.8E-11 67.0 9.4 96 174-278 23-123 (124)
363 2jsy_A Probable thiol peroxida 98.5 1E-06 3.4E-11 69.8 10.5 85 189-276 43-164 (167)
364 3gyk_A 27KDA outer membrane pr 98.5 2.5E-07 8.6E-12 74.0 6.7 82 189-277 21-171 (175)
365 3ztl_A Thioredoxin peroxidase; 98.5 6.8E-07 2.3E-11 74.6 9.5 87 189-276 68-195 (222)
366 2p5q_A Glutathione peroxidase 98.5 4.9E-08 1.7E-12 77.5 2.4 116 3-153 9-168 (170)
367 1eej_A Thiol:disulfide interch 98.5 2.2E-07 7.6E-12 77.3 6.4 81 189-277 85-209 (216)
368 2ggt_A SCO1 protein homolog, m 98.4 5.9E-08 2E-12 76.5 2.3 116 6-153 3-161 (164)
369 2v1m_A Glutathione peroxidase; 98.4 9.1E-08 3.1E-12 75.9 3.3 49 3-58 8-56 (169)
370 2e7p_A Glutaredoxin; thioredox 98.4 5.5E-09 1.9E-13 77.9 -3.7 75 39-151 24-106 (116)
371 1hyu_A AHPF, alkyl hydroperoxi 98.4 8.7E-08 3E-12 90.3 3.5 78 37-151 121-198 (521)
372 3gkn_A Bacterioferritin comigr 98.4 9.6E-07 3.3E-11 69.6 8.9 87 190-277 35-160 (163)
373 2rli_A SCO2 protein homolog, m 98.4 1.1E-07 3.8E-12 75.5 3.1 115 7-153 7-164 (171)
374 1xvq_A Thiol peroxidase; thior 98.4 2E-06 6.7E-11 68.9 10.4 86 189-278 43-167 (175)
375 1t3b_A Thiol:disulfide interch 98.4 5.3E-07 1.8E-11 74.7 7.0 81 189-277 85-209 (211)
376 2k8s_A Thioredoxin; dimer, str 98.4 1.7E-08 5.7E-13 70.1 -2.1 58 37-122 4-61 (80)
377 1h75_A Glutaredoxin-like prote 98.4 2E-07 7E-12 64.5 3.5 70 194-278 3-77 (81)
378 3kij_A Probable glutathione pe 98.4 1.8E-07 6.2E-12 75.3 3.6 50 2-58 14-63 (180)
379 2k6v_A Putative cytochrome C o 98.3 1.9E-08 6.6E-13 80.1 -2.7 113 5-150 15-170 (172)
380 2vup_A Glutathione peroxidase- 98.3 8.2E-08 2.8E-12 78.1 0.8 92 34-154 49-186 (190)
381 1v58_A Thiol:disulfide interch 98.3 7.9E-07 2.7E-11 75.2 6.7 85 189-278 96-232 (241)
382 3dwv_A Glutathione peroxidase- 98.3 6.5E-08 2.2E-12 78.5 -0.3 48 5-59 25-72 (187)
383 1ego_A Glutaredoxin; electron 98.3 9.3E-08 3.2E-12 66.9 0.4 77 37-152 3-83 (85)
384 1r7h_A NRDH-redoxin; thioredox 98.3 1.3E-06 4.5E-11 59.2 6.1 67 194-275 3-74 (75)
385 2f8a_A Glutathione peroxidase 98.3 2.8E-07 9.7E-12 76.2 2.8 49 4-59 24-73 (208)
386 2a4v_A Peroxiredoxin DOT5; yea 98.3 4E-06 1.4E-10 65.8 9.2 73 191-266 36-138 (159)
387 3cmi_A Peroxiredoxin HYR1; thi 98.3 8.6E-08 2.9E-12 76.5 -0.6 90 34-153 33-168 (171)
388 2i3y_A Epididymal secretory gl 98.2 5.2E-06 1.8E-10 68.8 9.9 88 189-278 55-210 (215)
389 2p31_A CL683, glutathione pero 98.2 1.2E-07 4.1E-12 76.5 -0.2 49 3-58 26-74 (181)
390 1xvw_A Hypothetical protein RV 98.2 3.1E-07 1.1E-11 72.1 2.1 118 3-150 12-157 (160)
391 2gs3_A PHGPX, GPX-4, phospholi 98.2 3.8E-07 1.3E-11 73.8 2.0 49 3-58 26-74 (185)
392 2cq9_A GLRX2 protein, glutared 98.2 1E-06 3.5E-11 67.1 4.2 99 180-292 18-128 (130)
393 3h93_A Thiol:disulfide interch 98.2 3.2E-06 1.1E-10 68.7 7.4 42 189-232 24-65 (192)
394 2c0d_A Thioredoxin peroxidase 98.2 4.5E-06 1.6E-10 69.5 8.1 88 189-277 55-182 (221)
395 3me7_A Putative uncharacterize 98.2 1.8E-05 6.2E-10 62.9 11.3 93 190-282 28-165 (170)
396 1n8j_A AHPC, alkyl hydroperoxi 98.2 7.7E-06 2.6E-10 66.1 9.1 89 189-278 29-155 (186)
397 2pn8_A Peroxiredoxin-4; thiore 98.2 7.8E-06 2.7E-10 67.6 9.2 88 189-277 47-175 (211)
398 3ixr_A Bacterioferritin comigr 98.2 1E-05 3.4E-10 65.0 9.5 86 190-276 51-175 (179)
399 2obi_A PHGPX, GPX-4, phospholi 98.1 2.8E-07 9.5E-12 74.4 0.1 49 3-58 24-72 (183)
400 2r37_A Glutathione peroxidase 98.1 1E-05 3.5E-10 66.7 9.5 87 189-277 37-191 (207)
401 1zof_A Alkyl hydroperoxide-red 98.1 6.1E-07 2.1E-11 73.3 1.9 120 3-153 4-161 (198)
402 1xzo_A BSSCO, hypothetical pro 98.1 1.1E-06 3.9E-11 69.8 3.4 52 3-61 10-62 (174)
403 1kte_A Thioltransferase; redox 98.1 5.4E-07 1.9E-11 65.7 1.3 79 193-277 13-101 (105)
404 1we0_A Alkyl hydroperoxide red 98.1 5.1E-07 1.8E-11 73.0 1.3 120 3-153 4-157 (187)
405 2bmx_A Alkyl hydroperoxidase C 98.1 7.7E-07 2.6E-11 72.6 2.1 121 3-154 7-171 (195)
406 4g2e_A Peroxiredoxin; redox pr 98.1 2.6E-06 8.8E-11 67.0 4.6 87 189-276 29-155 (157)
407 3qpm_A Peroxiredoxin; oxidored 98.1 1.8E-05 6.1E-10 66.8 9.7 88 189-277 76-204 (240)
408 2hze_A Glutaredoxin-1; thiored 98.1 1.2E-06 4.2E-11 65.0 1.9 80 191-278 18-109 (114)
409 3a2v_A Probable peroxiredoxin; 98.0 1.1E-05 3.7E-10 68.4 7.6 87 190-277 33-160 (249)
410 1psq_A Probable thiol peroxida 98.0 2.9E-05 1E-09 61.1 9.1 85 189-276 41-162 (163)
411 2jsy_A Probable thiol peroxida 98.0 2.3E-06 7.9E-11 67.7 2.4 117 3-152 21-166 (167)
412 2yzh_A Probable thiol peroxida 98.0 4.2E-05 1.4E-09 60.6 9.8 84 190-276 47-169 (171)
413 1eej_A Thiol:disulfide interch 98.0 2.4E-06 8.3E-11 70.9 2.2 107 35-152 88-210 (216)
414 2b7k_A SCO1 protein; metalloch 97.9 3.2E-06 1.1E-10 69.2 2.8 135 6-154 21-180 (200)
415 1nm3_A Protein HI0572; hybrid, 97.9 3.7E-05 1.3E-09 64.7 9.2 86 189-276 32-164 (241)
416 1h75_A Glutaredoxin-like prote 97.9 2.9E-07 9.8E-12 63.7 -3.3 72 37-150 3-75 (81)
417 1q98_A Thiol peroxidase, TPX; 97.9 4E-05 1.4E-09 60.4 8.4 72 189-263 42-148 (165)
418 1qmv_A Human thioredoxin perox 97.9 4.4E-06 1.5E-10 68.1 2.7 119 3-152 8-162 (197)
419 3p7x_A Probable thiol peroxida 97.9 3.2E-05 1.1E-09 61.1 7.6 84 189-276 45-165 (166)
420 2h01_A 2-Cys peroxiredoxin; th 97.9 3.6E-06 1.2E-10 68.3 1.9 120 3-152 3-158 (192)
421 1r7h_A NRDH-redoxin; thioredox 97.9 2E-06 6.9E-11 58.2 0.3 68 37-148 3-73 (75)
422 3tjj_A Peroxiredoxin-4; thiore 97.9 3.3E-05 1.1E-09 65.7 7.9 86 190-276 91-217 (254)
423 1xvq_A Thiol peroxidase; thior 97.9 2.9E-06 9.9E-11 67.9 1.0 49 3-58 21-70 (175)
424 3gyk_A 27KDA outer membrane pr 97.9 6.8E-06 2.3E-10 65.5 3.1 41 102-152 132-172 (175)
425 4gqc_A Thiol peroxidase, perox 97.9 2.3E-05 7.9E-10 62.0 6.1 132 3-152 8-159 (164)
426 1tp9_A Peroxiredoxin, PRX D (t 97.8 4.4E-05 1.5E-09 60.1 7.4 43 189-232 34-79 (162)
427 4dvc_A Thiol:disulfide interch 97.8 9.2E-05 3.1E-09 59.1 9.2 43 189-231 20-62 (184)
428 1t3b_A Thiol:disulfide interch 97.8 5.8E-06 2E-10 68.3 1.8 40 102-150 169-208 (211)
429 4gqc_A Thiol peroxidase, perox 97.8 7.7E-06 2.6E-10 64.8 2.3 88 189-277 32-158 (164)
430 3ic4_A Glutaredoxin (GRX-1); s 97.8 3.5E-05 1.2E-09 54.4 5.4 70 193-275 13-91 (92)
431 1uul_A Tryparedoxin peroxidase 97.8 8.1E-06 2.8E-10 66.8 2.1 120 3-153 9-165 (202)
432 4hde_A SCO1/SENC family lipopr 97.8 0.00025 8.7E-09 56.2 10.9 88 189-276 31-167 (170)
433 2ht9_A Glutaredoxin-2; thiored 97.7 1.3E-05 4.3E-10 62.3 2.8 86 180-277 40-135 (146)
434 3zrd_A Thiol peroxidase; oxido 97.7 0.00019 6.6E-09 58.5 10.0 71 189-262 77-182 (200)
435 2wfc_A Peroxiredoxin 5, PRDX5; 97.7 9.5E-05 3.2E-09 58.6 7.2 44 189-233 30-76 (167)
436 3nzn_A Glutaredoxin; structura 97.7 3.7E-05 1.3E-09 55.7 4.4 73 190-274 20-101 (103)
437 2klx_A Glutaredoxin; thioredox 97.7 6E-05 2.1E-09 52.9 5.3 50 193-250 7-61 (89)
438 2znm_A Thiol:disulfide interch 97.7 0.00017 5.8E-09 58.3 8.5 41 189-231 21-61 (195)
439 3qmx_A Glutaredoxin A, glutare 97.6 5.3E-05 1.8E-09 54.6 4.8 54 189-250 13-73 (99)
440 2ec4_A FAS-associated factor 1 97.6 0.00035 1.2E-08 55.8 10.1 119 141-276 14-165 (178)
441 2i3y_A Epididymal secretory gl 97.6 4.5E-05 1.6E-09 63.1 5.0 46 5-58 34-80 (215)
442 2i81_A 2-Cys peroxiredoxin; st 97.6 1.5E-05 5E-10 66.0 2.0 140 3-152 24-179 (213)
443 3gv1_A Disulfide interchange p 97.6 0.00015 5.1E-09 56.2 7.5 82 189-280 13-140 (147)
444 1zye_A Thioredoxin-dependent p 97.6 1.9E-05 6.3E-10 65.7 2.4 121 3-154 30-186 (220)
445 1fov_A Glutaredoxin 3, GRX3; a 97.6 0.0001 3.4E-09 50.6 5.9 67 194-277 3-75 (82)
446 3bj5_A Protein disulfide-isome 97.6 0.0007 2.4E-08 52.3 11.0 104 172-278 14-126 (147)
447 1v58_A Thiol:disulfide interch 97.6 1.3E-05 4.5E-10 67.6 1.3 46 102-152 187-232 (241)
448 4g2e_A Peroxiredoxin; redox pr 97.6 3.1E-05 1E-09 60.7 3.3 50 3-59 7-57 (157)
449 1kte_A Thioltransferase; redox 97.6 8.8E-06 3E-10 59.1 -0.1 55 37-121 14-73 (105)
450 2lqo_A Putative glutaredoxin R 97.6 0.00014 4.7E-09 51.6 6.1 73 193-279 5-84 (92)
451 1prx_A HORF6; peroxiredoxin, h 97.6 0.00056 1.9E-08 56.8 10.8 85 192-277 34-167 (224)
452 3gkn_A Bacterioferritin comigr 97.6 6.4E-06 2.2E-10 64.8 -1.3 131 3-151 10-160 (163)
453 3ztl_A Thioredoxin peroxidase; 97.6 1.3E-05 4.4E-10 66.8 0.5 118 3-151 43-196 (222)
454 2hze_A Glutaredoxin-1; thiored 97.6 6.1E-06 2.1E-10 61.1 -1.4 55 37-121 21-80 (114)
455 3hd5_A Thiol:disulfide interch 97.6 2.8E-05 9.5E-10 63.1 2.4 30 33-62 25-54 (195)
456 3hd5_A Thiol:disulfide interch 97.5 0.00014 4.8E-09 58.9 6.5 43 189-233 24-66 (195)
457 3c1r_A Glutaredoxin-1; oxidize 97.5 3.2E-05 1.1E-09 57.6 2.4 54 194-254 27-90 (118)
458 2a4v_A Peroxiredoxin DOT5; yea 97.5 1.9E-05 6.4E-10 61.9 1.1 47 3-58 10-61 (159)
459 1z6m_A Conserved hypothetical 97.5 0.00037 1.3E-08 55.3 8.5 30 190-219 27-56 (175)
460 1xcc_A 1-Cys peroxiredoxin; un 97.5 0.00028 9.5E-09 58.5 7.7 85 192-277 34-164 (220)
461 2v2g_A Peroxiredoxin 6; oxidor 97.5 0.00044 1.5E-08 57.8 8.8 86 191-277 30-163 (233)
462 3hz8_A Thiol:disulfide interch 97.5 0.00017 6E-09 58.4 6.2 43 189-233 23-65 (193)
463 2klx_A Glutaredoxin; thioredox 97.5 1.9E-05 6.5E-10 55.5 0.3 52 37-121 8-60 (89)
464 2rem_A Disulfide oxidoreductas 97.5 0.00044 1.5E-08 55.7 8.4 40 190-231 25-64 (193)
465 2yan_A Glutaredoxin-3; oxidore 97.4 0.00012 4.2E-09 53.1 4.4 58 181-249 9-77 (105)
466 2r37_A Glutathione peroxidase 97.4 9.7E-05 3.3E-09 60.7 4.2 46 5-58 16-62 (207)
467 3me7_A Putative uncharacterize 97.4 8.5E-05 2.9E-09 58.9 3.4 141 3-153 4-162 (170)
468 2khp_A Glutaredoxin; thioredox 97.4 0.00016 5.4E-09 50.9 4.1 52 193-254 7-64 (92)
469 2pwj_A Mitochondrial peroxired 97.3 8E-05 2.7E-09 59.2 2.6 42 191-233 45-88 (171)
470 1un2_A DSBA, thiol-disulfide i 97.3 1.1E-05 3.6E-10 66.0 -2.7 41 34-99 114-157 (197)
471 2cq9_A GLRX2 protein, glutared 97.3 2.1E-05 7.1E-10 59.7 -1.0 51 38-121 30-85 (130)
472 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00026 9E-09 52.0 4.6 53 194-254 21-81 (113)
473 2c0d_A Thioredoxin peroxidase 97.3 7.4E-05 2.5E-09 62.1 1.6 139 3-153 28-184 (221)
474 3h93_A Thiol:disulfide interch 97.2 9.7E-05 3.3E-09 59.7 1.9 29 34-62 26-54 (192)
475 1wik_A Thioredoxin-like protei 97.2 0.00028 9.5E-09 51.6 4.1 63 180-255 6-79 (109)
476 3ic4_A Glutaredoxin (GRX-1); s 97.2 2.3E-05 7.8E-10 55.4 -1.9 71 37-149 14-91 (92)
477 3uma_A Hypothetical peroxiredo 97.2 0.0004 1.4E-08 55.9 5.0 44 190-234 56-102 (184)
478 1q98_A Thiol peroxidase, TPX; 97.2 9.5E-05 3.2E-09 58.2 1.2 112 3-128 20-141 (165)
479 3c1r_A Glutaredoxin-1; oxidize 97.1 3.2E-05 1.1E-09 57.6 -1.9 54 37-120 27-86 (118)
480 2ht9_A Glutaredoxin-2; thiored 97.1 3.3E-05 1.1E-09 59.8 -1.8 50 39-121 53-107 (146)
481 3msz_A Glutaredoxin 1; alpha-b 97.1 0.00059 2E-08 47.3 4.6 70 193-277 5-85 (89)
482 2pn8_A Peroxiredoxin-4; thiore 97.0 0.00019 6.4E-09 59.1 1.6 139 3-153 22-177 (211)
483 3mng_A Peroxiredoxin-5, mitoch 97.0 0.001 3.5E-08 52.9 5.9 34 189-222 42-77 (173)
484 3zrd_A Thiol peroxidase; oxido 97.0 0.00022 7.6E-09 58.1 1.9 49 3-58 55-104 (200)
485 1psq_A Probable thiol peroxida 96.9 0.00014 4.9E-09 57.0 0.2 49 3-58 19-68 (163)
486 3p7x_A Probable thiol peroxida 96.9 0.00013 4.4E-09 57.5 -0.1 132 3-149 23-164 (166)
487 2yzh_A Probable thiol peroxida 96.9 0.00025 8.4E-09 56.1 1.2 49 3-58 24-73 (171)
488 3l9v_A Putative thiol-disulfid 96.9 0.00063 2.2E-08 54.9 3.4 42 190-233 14-58 (189)
489 4hde_A SCO1/SENC family lipopr 96.8 0.00058 2E-08 54.1 3.1 48 4-58 10-58 (170)
490 3a2v_A Probable peroxiredoxin; 96.8 0.0004 1.4E-08 58.7 2.3 50 104-153 106-162 (249)
491 3nzn_A Glutaredoxin; structura 96.8 0.00027 9.3E-09 51.0 0.8 22 37-58 24-45 (103)
492 3ixr_A Bacterioferritin comigr 96.8 0.00014 4.8E-09 58.2 -0.9 130 6-151 31-176 (179)
493 3msz_A Glutaredoxin 1; alpha-b 96.8 0.00022 7.6E-09 49.6 0.1 75 37-153 6-87 (89)
494 3feu_A Putative lipoprotein; a 96.8 0.0008 2.7E-08 54.1 3.4 30 190-219 22-51 (185)
495 3ctg_A Glutaredoxin-2; reduced 96.7 0.00053 1.8E-08 51.8 1.9 56 194-254 39-102 (129)
496 1fov_A Glutaredoxin 3, GRX3; a 96.7 0.00021 7.3E-09 48.9 -0.3 52 37-121 3-56 (82)
497 3keb_A Probable thiol peroxida 96.7 0.0036 1.2E-07 51.8 7.0 82 189-276 47-173 (224)
498 3qmx_A Glutaredoxin A, glutare 96.7 0.00014 4.8E-09 52.3 -1.4 22 37-58 18-39 (99)
499 2yan_A Glutaredoxin-3; oxidore 96.7 0.00014 5E-09 52.7 -1.5 51 38-121 20-77 (105)
500 2lqo_A Putative glutaredoxin R 96.7 0.00029 9.9E-09 49.9 0.0 75 37-152 6-83 (92)
No 1
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=100.00 E-value=9.3e-40 Score=296.02 Aligned_cols=249 Identities=47% Similarity=0.892 Sum_probs=216.4
Q ss_pred CCCeEEEEe-eccCceecCCCCCCCChhHHHHHhhh----------------------------hhcCccccccccccee
Q psy7938 5 EVPSLRLIR-LEEDMAKYKPATPEINVDTVRSFVTE----------------------------FLAGNLKHSKFKKNLY 55 (305)
Q Consensus 5 ~~p~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~iv~----------------------------f~a~wc~~c~~~~p~~ 55 (305)
..|+|.||| +++....| +++.+.+++..||.. ||++||++|+.+.|.|
T Consensus 81 ~~~~i~lfk~f~~~~~~~---~g~~~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~ 157 (361)
T 3uem_A 81 DKDGVVLFKKFDEGRNNF---EGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNF 157 (361)
T ss_dssp SSSEEEEEESSTTSEEEC---CSCCCHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHH
T ss_pred CCCeEEEEEecCCCcccc---CCcCCHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHH
Confidence 358999999 57777788 445566666666643 8889999998877777
Q ss_pred eeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCC
Q psy7938 56 IHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPA 135 (305)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~ 135 (305)
.++ +.++++++.|+.|||+..++.++|+.|||+..++|++++|+.++...+|.+.
T Consensus 158 ~~~-------------------------A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~ 212 (361)
T 3uem_A 158 KTA-------------------------AESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPE 212 (361)
T ss_dssp HHH-------------------------HGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCS
T ss_pred HHH-------------------------HHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCC
Confidence 776 4556788999999999666899999999984459999999987666788765
Q ss_pred CCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHH
Q psy7938 136 TPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKL 215 (305)
Q Consensus 136 ~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~l 215 (305)
.+.++.++|.+|+.+++.|++++..+|+++|+.|....|..+++.+|.+.+.+.+++++|.||++||++|+.+.|.|.++
T Consensus 213 ~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~l 292 (361)
T 3uem_A 213 SEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKL 292 (361)
T ss_dssp SCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHH
Confidence 57899999999999999999999999999999888889999999999999988899999999999999999999999999
Q ss_pred HHHhCCCCceEEEEEeCCccccccCCcccccEEEEEeCC-CceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 216 GEKFADRDDITIAKIDATVNELEHTKITSFPTLKLYAKD-DNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 216 a~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~f~~g-~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
+..+++..++.++.+|++.+.+..++|+++||+++|++| +..+.+|.|.++.+.|.+||+++.+..
T Consensus 293 a~~~~~~~~v~~~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 359 (361)
T 3uem_A 293 GETYKDHENIVIAKMDSTANEVEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDG 359 (361)
T ss_dssp HHHTTTCSSEEEEEEETTTCBCSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTSCSC
T ss_pred HHHhccCCcEEEEEEECCccchhhcCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcCCCC
Confidence 999987668999999999999999999999999999776 444899999999999999999998765
No 2
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=3.4e-35 Score=251.02 Aligned_cols=223 Identities=25% Similarity=0.434 Sum_probs=182.4
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
...++.++.++++....+.+.+++.|||+||++|+.+.|.+.+++..+ ......+.|+
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~----------------------~~~~~~~~~~ 71 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANIL----------------------KDKDPPIPVA 71 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHH----------------------HTSSSCCCEE
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHH----------------------hhcCCceEEE
Confidence 456777776666655555678999999999999999998888884443 1112348999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAV 174 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v 174 (305)
.|||+ ++.++|++|||. ++||+++|+.|+.+ .| .|.++.++|.+|+.+.......+ ....+
T Consensus 72 ~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~~~-~~---~g~~~~~~l~~~i~~~~~~~~~~-----------~~~~~ 132 (241)
T 3idv_A 72 KIDAT--SASVLASRFDVS--GYPTIKILKKGQAV-DY---EGSRTQEEIVAKVREVSQPDWTP-----------PPEVT 132 (241)
T ss_dssp EEETT--TCHHHHHHTTCC--SSSEEEEEETTEEE-EC---CSCSCHHHHHHHHHHHHSTTCCC-----------CCCSS
T ss_pred EEecc--CCHHHHHhcCCC--cCCEEEEEcCCCcc-cc---cCcccHHHHHHHHhhccCccccc-----------ccccc
Confidence 99999 889999999998 99999999977653 44 37899999999999987543211 12248
Q ss_pred EEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC-CCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 175 KVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD-RDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 175 ~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
..++.++|.+.+. .+++++|.||++||++|+.+.|.|.+++..+.+ ..++.++.+|++.+.. ++|+|+++||+++|
T Consensus 133 ~~~~~~~~~~~~~-~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 211 (241)
T 3idv_A 133 LVLTKENFDEVVN-DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIF 211 (241)
T ss_dssp EECCTTTHHHHHH-HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred eeccHHHHHHhhc-cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 8899999999884 467999999999999999999999999999865 2469999999998764 89999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++|+ .+.|.|.++.+.|.+||.++....
T Consensus 212 ~~g~--~~~~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 212 RKGR--PYDYNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp ETTE--EEECCSCCSHHHHHHHHHHHTTCT
T ss_pred ECCe--EEEecCCCCHHHHHHHHHhhhCCC
Confidence 9873 466999999999999999987643
No 3
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.97 E-value=1.5e-29 Score=237.44 Aligned_cols=279 Identities=29% Similarity=0.476 Sum_probs=212.2
Q ss_pred CCeEEEEe------e-ccCceecCCCCCCCChhHHHHHhhhhhcCccccccccc-ceeeeecccccccCCCCCcc--hhh
Q psy7938 6 VPSLRLIR------L-EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKK-NLYIHLEEDMAKYKPASPEI--NVD 75 (305)
Q Consensus 6 ~p~i~l~~------~-~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~-p~~~~~~~~~~~~~~~~~~~--~~~ 75 (305)
.+.|.+|| . ++....|+ .+..+...+..||.....|.++.-...+ ..+......+..+..+.... ..+
T Consensus 176 ~~~i~~~~p~~~~~~~~~~~~~y~--~~~~~~~~l~~fi~~~~~p~v~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~ 253 (481)
T 3f8u_A 176 GEGIILFRPSHLTNKFEDKTVAYT--EQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSN 253 (481)
T ss_dssp SEEEEEECCGGGCBTTBCSEEECC--CSSCCHHHHHHHHHHHTTTTSCEECTTTHHHHTTSSEEEEEECCCTTTCHHHHH
T ss_pred CCcEEEEecccccCccCCcccccC--CCCCCHHHHHHHHHHhCCCCccccChhHHHHhcCCCceEEEEecccccchhhHH
Confidence 45688888 2 56667773 2557789999999999998888774331 00101111111111111111 112
Q ss_pred hhhhHHH-HHhhcCce---EEEEEEeCCchhHHHHHHHcCCC--CCCCCeEEEEecCcCceeccCCCCCCCHH--HHHHH
Q psy7938 76 TVRSFVT-EFLAGNLK---VLFVTINTDEEDHQKILEFFGMS--KDEVPSLRLIRLEEDMAKYKPATPEISVD--TVRSF 147 (305)
Q Consensus 76 ~~~~~~~-~~~~~~~~---v~~~~vd~~~~~~~~l~~~~~I~--~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~--~l~~f 147 (305)
.+.+.+. -+.+++++ +.|+.+|++ ++.++++.||++ ....|.+++++.+ ..+|.+. +..+.+ +|.+|
T Consensus 254 ~~~~~~~~vA~~~~~k~~~i~F~~~D~~--~~~~~l~~~gl~~~~~~~P~~~i~~~~--~~ky~~~-~~~t~e~~~l~~f 328 (481)
T 3f8u_A 254 YWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAK--GEKFVMQ-EEFSRDGKALERF 328 (481)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCTTCSCEEEEECSS--SCEEECC-SCCCTTSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEEcHH--HHHHHHHHcCCCcccCCCcEEEEEcCC--CcccCCC-cccCccHHHHHHH
Confidence 2333322 22344455 999999999 888999999997 3468999999733 2567665 678888 99999
Q ss_pred HHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEE
Q psy7938 148 VTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITI 227 (305)
Q Consensus 148 v~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~ 227 (305)
+.+++.|++++.++|+++|.. +...|..+++.+|.+.+.+.+++++|.||++||++|+.+.|.|+++++.+++..++.+
T Consensus 329 ~~~~~~g~~~~~~~s~~~p~~-~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~ 407 (481)
T 3f8u_A 329 LQDYFDGNLKRYLKSEPIPES-NDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVI 407 (481)
T ss_dssp HHHHHHTCCCCCCCCCCCCSC-CCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEE
T ss_pred HHHHhcCCcccccccCCCCCC-CCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEE
Confidence 999999999999999999987 7778999999999999988899999999999999999999999999999987668999
Q ss_pred EEEeCCcccc-ccCCcccccEEEEEeCCCce-EEeeeCCCCHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy7938 228 AKIDATVNEL-EHTKITSFPTLKLYAKDDNR-VIDYNGERVLEALSNFVESGGKEGGLPSGAQQGKF 292 (305)
Q Consensus 228 ~~id~~~~~~-~~~~i~~~Ptl~~f~~g~~~-~~~~~g~~~~~~l~~fi~~~~~~~~~~~~~~~~~~ 292 (305)
+.+|++.++. ..++|.++||+++|++|++. +.+|.|.++.+.|.+||.++...+...........
T Consensus 408 ~~id~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 474 (481)
T 3f8u_A 408 AKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQEEKPKKK 474 (481)
T ss_dssp EEEETTSSCCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHCSSCCCCCCC-----
T ss_pred EEEECCchhhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhcCCcccccchhhhhh
Confidence 9999999977 78999999999999998874 89999999999999999999877666554444333
No 4
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=4.3e-31 Score=223.60 Aligned_cols=193 Identities=12% Similarity=0.210 Sum_probs=156.3
Q ss_pred HhhhhhcC-cccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC
Q psy7938 36 FVTEFLAG-NLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK 114 (305)
Q Consensus 36 ~iv~f~a~-wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~ 114 (305)
.|+.||++ ||++|+.+.|.+.+++ +..++|.|+.|||+.++++++|++|||.
T Consensus 25 ~lv~f~~~~~C~~C~~~~~~~~~la--------------------------~~~~~v~~~~vd~~~~~~~~~~~~~~v~- 77 (226)
T 1a8l_A 25 KLIVFVRKDHCQYCDQLKQLVQELS--------------------------ELTDKLSYEIVDFDTPEGKELAKRYRID- 77 (226)
T ss_dssp EEEEEECSSSCTTHHHHHHHHHHHH--------------------------TTCTTEEEEEEETTSHHHHHHHHHTTCC-
T ss_pred EEEEEecCCCCchhHHHHHHHHHHH--------------------------hhCCceEEEEEeCCCcccHHHHHHcCCC-
Confidence 35779999 9999999998888872 2236799999999943389999999998
Q ss_pred CCCCeEEEEecCcCc-eeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcE
Q psy7938 115 DEVPSLRLIRLEEDM-AKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHV 193 (305)
Q Consensus 115 ~~~Ptl~~~~~~~~~-~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~ 193 (305)
++||+++|+.|... .+|. |..+.+++.+|+...+... +.+..++.++|+.+. ..++++
T Consensus 78 -~~Pt~~~~~~g~~~~~~~~---G~~~~~~l~~~l~~~l~~~----------------~~~~~l~~~~~~~~~-~~~~~~ 136 (226)
T 1a8l_A 78 -RAPATTITQDGKDFGVRYF---GLPAGHEFAAFLEDIVDVS----------------REETNLMDETKQAIR-NIDQDV 136 (226)
T ss_dssp -SSSEEEEEETTBCCSEEEE---SCCCTTHHHHHHHHHHHHH----------------HTCCCCCHHHHHHHT-TCCSCE
T ss_pred -cCceEEEEcCCceeeEEEe---ccCcHHHHHHHHHHHHhhc----------------CCCCCCCHHHHHHHH-hcCCCc
Confidence 99999999877642 5663 5567788999998876421 113455667777765 445566
Q ss_pred -EEEEECCCChhhhhHHHHHHHHHHHhC--CCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHH
Q psy7938 194 -LVEFYAPWCGHCKQLAPIYDKLGEKFA--DRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLE 268 (305)
Q Consensus 194 -lv~f~~~~C~~C~~~~~~~~~la~~~~--~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~ 268 (305)
+|.||++||++|+.+.|.|++++..+. +.+++.++.+|++.+.. .+|+|.++||+++|++|+. ..++.|..+.+
T Consensus 137 ~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~-~~~~~G~~~~~ 215 (226)
T 1a8l_A 137 RILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGED-RVEFEGAYPEK 215 (226)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEE-EEEEESCCCHH
T ss_pred EEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCce-eEEEcCCCCHH
Confidence 999999999999999999999999985 22479999999998774 8899999999999987754 78899999999
Q ss_pred HHHHHHHhc
Q psy7938 269 ALSNFVESG 277 (305)
Q Consensus 269 ~l~~fi~~~ 277 (305)
.|.+||++.
T Consensus 216 ~l~~~l~~~ 224 (226)
T 1a8l_A 216 MFLEKLLSA 224 (226)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 5
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.97 E-value=8.7e-30 Score=240.37 Aligned_cols=264 Identities=27% Similarity=0.452 Sum_probs=203.1
Q ss_pred EEEEeeccCceecCCCCCC-C---ChhHHHHHhhhhhcCccccccccc-ceeeeecccccccCCCCCcchhhhhhhH-HH
Q psy7938 9 LRLIRLEEDMAKYKPATPE-I---NVDTVRSFVTEFLAGNLKHSKFKK-NLYIHLEEDMAKYKPASPEINVDTVRSF-VT 82 (305)
Q Consensus 9 i~l~~~~~~~~~~~~~~~~-~---~~~~~~~~iv~f~a~wc~~c~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 82 (305)
+.+++..+....| +++ . +.+.+..||..+..|+|+++.... ..+......+.-+..+... ..+.+.+. ..
T Consensus 186 i~l~~~~~~~~~~---~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~l~~ 261 (504)
T 2b5e_A 186 IYLPSAMDEPVVY---NGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGYLFYNDEE-ELEEYKPLFTE 261 (504)
T ss_dssp EEETTEEEEEEEC---CSCHHHHTSHHHHHHHHHHHSSCSSCBCCHHHHHHHHHTTSCEEEEEESSHH-HHHHHHHHHHH
T ss_pred EEecCCCCccccc---CCcccccCCHHHHHHHHHhcccCCcccCCHhHHHHHhcCCCcEEEEEecCcc-cHHHHHHHHHH
Confidence 5556642255556 344 4 778899999999999999995321 0000000011111111111 11223333 33
Q ss_pred HHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCC-CC-----------CCHHHHHHHHHH
Q psy7938 83 EFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPAT-PE-----------ISVDTVRSFVTE 150 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~-~~-----------~~~~~l~~fv~~ 150 (305)
-+.++++++.|+.+|++ ++.++++.||+ ...+|++++++.... .+|.+.. ++ .+.+.+.+|+.+
T Consensus 262 ~a~~~~~~i~F~~id~~--~~~~~~~~~gl-~~~~P~v~i~~~~~~-~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~ 337 (504)
T 2b5e_A 262 LAKKNRGLMNFVSIDAR--KFGRHAGNLNM-KEQFPLFAIHDMTED-LKYGLPQLSEEAFDELSDKIVLESKAIESLVKD 337 (504)
T ss_dssp HHHHTTTTCEEEEEEHH--HHTTHHHHTTC-CSCSSEEEEEETTTT-EEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHH
T ss_pred HHHhcCCeeEEEEEehh--hhHHHHHHcCC-cccCCEEEEEeCCcC-cccCCCCCccchhhccccccccCHHHHHHHHHH
Confidence 34667789999999999 88889999999 568999999997543 5676542 34 789999999999
Q ss_pred HHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhC-CCCceEEEE
Q psy7938 151 FLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFA-DRDDITIAK 229 (305)
Q Consensus 151 ~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~-~~~~v~~~~ 229 (305)
++.|+..+..+|+++|.. ..+.|..|++++|...+.+.+++++|.||++||++|+.+.|.|.++++.++ ...++.+++
T Consensus 338 ~~~g~~~p~~~s~~~p~~-~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~ 416 (504)
T 2b5e_A 338 FLKGDASPIVKSQEIFEN-QDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAK 416 (504)
T ss_dssp HHHTCCCCCCCCCCCCCC-CSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHcCCCChhhhcCCCCcc-ccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEE
Confidence 999999999999999987 667899999999999998889999999999999999999999999999986 445899999
Q ss_pred EeCCccccccCCcccccEEEEEeCCCce-EEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 230 IDATVNELEHTKITSFPTLKLYAKDDNR-VIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 230 id~~~~~~~~~~i~~~Ptl~~f~~g~~~-~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
+|++.++...++|+++||+++|++|+.. +.+|.|.++.+.|.+||+++....
T Consensus 417 vd~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 469 (504)
T 2b5e_A 417 LDHTENDVRGVVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENGHFD 469 (504)
T ss_dssp EEGGGCCCSSCCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHCTTC
T ss_pred ecCCccccccCCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcCCCC
Confidence 9999988855999999999999887542 788999999999999999986543
No 6
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.96 E-value=9.8e-30 Score=251.78 Aligned_cols=192 Identities=16% Similarity=0.302 Sum_probs=165.7
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMS 113 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~ 113 (305)
..+++.|||+||++|+.+.|.+.++ +..++++|.|+.|||+ ++..+|+.|||+
T Consensus 456 ~~vlv~F~a~wC~~c~~~~p~~~~~-------------------------a~~~~~~v~~~~vd~~--~~~~~~~~~~v~ 508 (780)
T 3apo_A 456 EPWLVDFFAPWSPPSRALLPELRKA-------------------------STLLYGQLKVGTLDCT--IHEGLCNMYNIQ 508 (780)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEEETT--TCHHHHHHTTCC
T ss_pred CeEEEEEECCCCHHHHHHhHHHHHH-------------------------HHHhcCCeEEEEEeCC--CCHHHHHHcCCC
Confidence 4567779999999999888888877 4455578999999999 888999999998
Q ss_pred CCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcC--CC
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDK--SK 191 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~--~~ 191 (305)
++||+++|+.|.. ..| .|.++.++|.+|+.+++. ..|..|++++|++++.+. +.
T Consensus 509 --~~Pt~~~~~~g~~-~~~---~g~~~~~~l~~fi~~~~~------------------~~v~~l~~~~f~~~v~~~~~~~ 564 (780)
T 3apo_A 509 --AYPTTVVFNQSSI-HEY---EGHHSAEQILEFIEDLRN------------------PSVVSLTPSTFNELVKQRKHDE 564 (780)
T ss_dssp --SSSEEEEEETTEE-EEE---CSCSCHHHHHHHHHHHHS------------------CSEEECCHHHHHHHTTTCCTTC
T ss_pred --cCCeEEEEcCCce-eee---cCcccHHHHHHHHHhhcc------------------cceeecCcccHHHHhhccCCCC
Confidence 8999999976543 344 378899999999999974 138889999999998653 46
Q ss_pred cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCc---eEEeeeC-CC
Q psy7938 192 HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDN---RVIDYNG-ER 265 (305)
Q Consensus 192 ~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~---~~~~~~g-~~ 265 (305)
.++|.||+|||++|+.+.|.|+++|+.+++ ++.|+.+||+.+.. ..++|+++||+++|+.|+. .+..|.| .+
T Consensus 565 ~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~ 642 (780)
T 3apo_A 565 VWMVDFYSPWSHPSQVLMPEWKRMARTLTG--LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNR 642 (780)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCC
T ss_pred eEEEEEECCCCHHHHHhhHHHHHHHHHhhC--CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCC
Confidence 789999999999999999999999999964 79999999998775 7899999999999998754 3688999 89
Q ss_pred CHHHHHHHHHhcC
Q psy7938 266 VLEALSNFVESGG 278 (305)
Q Consensus 266 ~~~~l~~fi~~~~ 278 (305)
+.+.|.+||.+..
T Consensus 643 ~~~~l~~fi~~~~ 655 (780)
T 3apo_A 643 DAYSLRSWGLGFL 655 (780)
T ss_dssp SHHHHHHHHHTTS
T ss_pred CHHHHHHHHhhhc
Confidence 9999999999876
No 7
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.96 E-value=2.2e-29 Score=213.65 Aligned_cols=184 Identities=14% Similarity=0.162 Sum_probs=148.4
Q ss_pred hcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeE
Q psy7938 41 LAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSL 120 (305)
Q Consensus 41 ~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl 120 (305)
|+|||+||+.+.|.|.+++..+ .. .++|.|++|||+ +++++|++|||+ ++||+
T Consensus 33 ~~~~C~~c~~~~~~~~~~a~~~----------------------~~-~~~v~~~~vd~~--~~~~l~~~~~v~--~~Ptl 85 (229)
T 2ywm_A 33 GCESCQTAEELLKETVEVIGEA----------------------VG-QDKIKLDIYSPF--THKEETEKYGVD--RVPTI 85 (229)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHH----------------------HC-TTTEEEEEECTT--TCHHHHHHTTCC--BSSEE
T ss_pred CCcccHHHHHHHHHHHHHHhcc----------------------CC-CCceEEEEecCc--ccHHHHHHcCCC--cCcEE
Confidence 5999999998877766652222 11 368999999999 889999999998 99999
Q ss_pred EEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcE-EEEEEC
Q psy7938 121 RLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHV-LVEFYA 199 (305)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~-lv~f~~ 199 (305)
++|+.+.....|. |.++.+++.+|+...+.. .+.+..++.++|+.++. .++++ ++.||+
T Consensus 86 ~~~~~~~~~~~~~---G~~~~~~l~~~~~~~~~~----------------~~~~~~l~~~~~~~~~~-~~~~~~~v~F~a 145 (229)
T 2ywm_A 86 VIEGDKDYGIRYI---GLPAGLEFTTLINGIFHV----------------SQRKPQLSEKTLELLQV-VDIPIEIWVFVT 145 (229)
T ss_dssp EEESSSCCCEEEE---SCCCTTHHHHHHHHHHHH----------------HTTCCSCCHHHHHHHTT-CCSCEEEEEEEC
T ss_pred EEECCCcccceec---CCccHHHHHHHHHHHHhc----------------cCCccCCCHHHHHHHHh-cCCCeEEEEEEC
Confidence 9998655556673 667888999999887531 11255677788888763 44555 889999
Q ss_pred CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 200 PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 200 ~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+||++|+.+.|.+++++..+ +++.++.+|++.+.. ++++|.++||+++ +| + +.++.|..+.+.|.+||++.
T Consensus 146 ~wC~~C~~~~~~~~~~~~~~---~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G-~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 146 TSCGYCPSAAVMAWDFALAN---DYITSKVIDASENQDLAEQFQVVGVPKIVI--NK-G-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp TTCTTHHHHHHHHHHHHHHC---TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GG-G-TEEEESCCCHHHHHHHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHC---CCeEEEEEECCCCHHHHHHcCCcccCEEEE--CC-E-EEEeeCCCCHHHHHHHHHHH
Confidence 99999999999999999998 379999999988764 8999999999999 44 3 57799999999999999876
Q ss_pred C
Q psy7938 278 G 278 (305)
Q Consensus 278 ~ 278 (305)
.
T Consensus 219 ~ 219 (229)
T 2ywm_A 219 Y 219 (229)
T ss_dssp H
T ss_pred h
Confidence 4
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.95 E-value=8.4e-29 Score=245.10 Aligned_cols=192 Identities=17% Similarity=0.295 Sum_probs=162.8
Q ss_pred HhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCC
Q psy7938 36 FVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKD 115 (305)
Q Consensus 36 ~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~ 115 (305)
|++.||+|||+||+.+.|.|.++ +..++++|.|+++||+ ++..+|++++|+
T Consensus 566 ~lv~F~ap~C~~c~~~~p~~~~l-------------------------A~~~~~~v~~~~vd~~--~~~~l~~~~~v~-- 616 (780)
T 3apo_A 566 WMVDFYSPWSHPSQVLMPEWKRM-------------------------ARTLTGLINVGSVDCG--QYHSFCTQENVQ-- 616 (780)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHTTTSEEEEEETT--TTHHHHHHTTCC--
T ss_pred EEEEEECCCCHHHHHhhHHHHHH-------------------------HHHhhCCeEEEEEECc--chHHHHHHcCCC--
Confidence 46779999999999998888887 3444578999999999 889999999998
Q ss_pred CCCeEEEEecCcC----ceeccCCCC-CCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCC
Q psy7938 116 EVPSLRLIRLEED----MAKYKPATP-EISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKS 190 (305)
Q Consensus 116 ~~Ptl~~~~~~~~----~~~~~~~~~-~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~ 190 (305)
++||+++|..+.. ...| .| .++.++|.+|+.+... ..+..++..+|.+.+.+.+
T Consensus 617 ~~Pti~~~~~~~~~~~~~~~y---~g~~~~~~~l~~fi~~~~~------------------~~v~~l~~~~~~~~~~~~~ 675 (780)
T 3apo_A 617 RYPEIRFYPQKSSKAYQYHSY---NGWNRDAYSLRSWGLGFLP------------------QASIDLTPQTFNEKVLQGK 675 (780)
T ss_dssp SSSEEEEECCCSSSCCSCEEC---CCSCCSHHHHHHHHHTTSC------------------CCSEEECHHHHHHHTTTCS
T ss_pred CCCeEEEEcCCCcCccchhhc---CCCCCCHHHHHHHHhhhcc------------------cccccCCHHHHHHHHhcCC
Confidence 8999999998653 2234 36 7899999999998741 1288899999998887788
Q ss_pred CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeC----C
Q psy7938 191 KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNG----E 264 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g----~ 264 (305)
++++|.||++||++|+.+.|.|++++..+++ ++.++.+|++.+.. ..++|.++||+++|++|+. ..++.| .
T Consensus 676 ~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~-~~~~~G~~~g~ 752 (780)
T 3apo_A 676 THWVVDFYAPWSGPSQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQINS 752 (780)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETT-TTEEEEEEECC
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCc-cccccCcccCC
Confidence 9999999999999999999999999999954 79999999998775 8899999999999987765 444555 6
Q ss_pred CCHHHHHHHHHhcCCC
Q psy7938 265 RVLEALSNFVESGGKE 280 (305)
Q Consensus 265 ~~~~~l~~fi~~~~~~ 280 (305)
.+.+.|.+||.+....
T Consensus 753 ~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 753 RDAKTIAALIYGKLET 768 (780)
T ss_dssp CCHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHHHHH
Confidence 8999999999998753
No 9
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.94 E-value=3.9e-27 Score=201.58 Aligned_cols=197 Identities=12% Similarity=0.130 Sum_probs=149.5
Q ss_pred HHHhhhhhcCc--ccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCce--EEEEEEeCCchhHHHHHHH
Q psy7938 34 RSFVTEFLAGN--LKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLK--VLFVTINTDEEDHQKILEF 109 (305)
Q Consensus 34 ~~~iv~f~a~w--c~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~vd~~~~~~~~l~~~ 109 (305)
.++++.||++| |++|+.+.|++.+++... .+++++ |.|+++|++ +++++|++
T Consensus 26 ~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~----------------------~~~~~~~~v~~~~vd~d--~~~~~~~~ 81 (243)
T 2hls_A 26 NPVEVHVFLSKSGCETCEDTLRLMKLFEEES----------------------PTRNGGKLLKLNVYYRE--SDSDKFSE 81 (243)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHHHS----------------------CEETTEESEEEEEEETT--TTHHHHHH
T ss_pred CCEEEEEEeCCCCCCchHHHHHHHHHHHHhc----------------------cCCCCCceeEEEEecCC--cCHHHHHh
Confidence 35667799999 999999988888873322 113355 999999999 88999999
Q ss_pred cCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcC
Q psy7938 110 FGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDK 189 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~ 189 (305)
|||+ ++||+++| .| ..+|. |..+.+++..|+...+.....+. .++.+.++.+..-.
T Consensus 82 ~gv~--~~Pt~~i~-~g--~~~~~---G~~~~~~l~~fv~~~l~~~~~~~----------------~l~~~~~~~~~~~~ 137 (243)
T 2hls_A 82 FKVE--RVPTVAFL-GG--EVRWT---GIPAGEEIRALVEVIMRLSEDES----------------GLEDATKEALKSLK 137 (243)
T ss_dssp TTCC--SSSEEEET-TT--TEEEE---SCCCTTHHHHHHHHHHHHHTTCC----------------CCCHHHHHHHHHCC
T ss_pred cCCC--cCCEEEEE-CC--ceeEc---CCCcHHHHHHHHHHHHhccCCCC----------------CCCHHHHHHHHHcC
Confidence 9998 99999999 44 46774 44566789999988764221111 12233444433234
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhC--CCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCC
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFA--DRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGER 265 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~--~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~ 265 (305)
++.+++.||++||++|+.+.|.|++++..++ +..++.+..+|++.+.. ..|+|.++||+++ +| + . .|.|.+
T Consensus 138 ~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G-~-~-~~~G~~ 212 (243)
T 2hls_A 138 GRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NG-Y-L-VFVGVP 212 (243)
T ss_dssp SCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT-E-E-EEESCC
T ss_pred CCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CC-E-E-EEeCCC
Confidence 5677999999999999999999999999983 23579999999998764 7899999999988 44 3 3 499999
Q ss_pred CHHHHHHHHHhcCCCCCC
Q psy7938 266 VLEALSNFVESGGKEGGL 283 (305)
Q Consensus 266 ~~~~l~~fi~~~~~~~~~ 283 (305)
+.+.|.+||.+.......
T Consensus 213 ~~~~l~~~l~~~~~~~~~ 230 (243)
T 2hls_A 213 YEEDFLDYVKSAAEGRLT 230 (243)
T ss_dssp CHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHhhcccc
Confidence 999999999988754333
No 10
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.92 E-value=9.8e-26 Score=204.28 Aligned_cols=207 Identities=12% Similarity=0.159 Sum_probs=162.4
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhhcCccccccccc------ceeeeecccccccCCCCCcchhhhhhhHHHHHhhcC
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKK------NLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGN 88 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (305)
.++++.++.++|+..+++...++|.||||||+||+... |.|..++..+ +
T Consensus 12 ~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~-------------------------~ 66 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL-------------------------E 66 (367)
T ss_dssp CCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHH-------------------------T
T ss_pred CCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHh-------------------------h
Confidence 45688898888887777778899999999999984332 4555552222 2
Q ss_pred c-eEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCC
Q psy7938 89 L-KVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPE 167 (305)
Q Consensus 89 ~-~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~ 167 (305)
+ .|.|++|||+ ++++||++|||+ ++||+++|+.|.. ..| .|.++.+.|.+|+.+.+..
T Consensus 67 ~~~v~~~~Vd~~--~~~~l~~~~~V~--~~PTl~~f~~G~~-~~y---~G~~~~~~i~~~i~~~~~~------------- 125 (367)
T 3us3_A 67 DKGVGFGLVDSE--KDAAVAKKLGLT--EEDSIYVFKEDEV-IEY---DGEFSADTLVEFLLDVLED------------- 125 (367)
T ss_dssp TTTEEEEEEETT--TTHHHHHHHTCC--STTEEEEEETTEE-EEC---CSCCSHHHHHHHHHHHHSC-------------
T ss_pred cCCceEEEEeCc--ccHHHHHHcCCC--cCceEEEEECCcE-EEe---CCCCCHHHHHHHHHHhcCC-------------
Confidence 3 5999999999 889999999998 9999999998754 456 4789999999999998632
Q ss_pred ccccCCcEEec-ccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCccccc
Q psy7938 168 DWDKNAVKVLV-ASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFP 246 (305)
Q Consensus 168 ~~~~~~v~~l~-~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~P 246 (305)
.+..++ .+++++++...++.++|.|+++||+ ...+.|.++|..+++ .+.|+.+.. ..-++.++++. |
T Consensus 126 -----~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~--~~~F~~~~~-~~~~~~~~v~~-p 193 (367)
T 3us3_A 126 -----PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHP--YIPFFATFD-SKVAKKLTLKL-N 193 (367)
T ss_dssp -----SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTT--TSCEEEECC-HHHHHHHTCCT-T
T ss_pred -----CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcC--CcEEEEECC-HHHHHHcCCCC-C
Confidence 266774 4788888753568899999999866 457789999999964 677776652 33347888885 9
Q ss_pred EEEEEeCCCceEEeeeCC-CCHHHHHHHHHhcCC
Q psy7938 247 TLKLYAKDDNRVIDYNGE-RVLEALSNFVESGGK 279 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~-~~~~~l~~fi~~~~~ 279 (305)
++++|+++...+..|.|. ++.+.|.+||..+..
T Consensus 194 ~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 227 (367)
T 3us3_A 194 EIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRR 227 (367)
T ss_dssp CEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCS
T ss_pred eEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCc
Confidence 999999865558899994 999999999999874
No 11
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.91 E-value=5.3e-25 Score=198.34 Aligned_cols=205 Identities=11% Similarity=0.174 Sum_probs=158.0
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccce-------eeeecccccccCCCCCcchhhhhhhHHHHHhhcC
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNL-------YIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGN 88 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (305)
++++.++.++|+..+.+...+++.||||||+ |+.+.|. |.+++.. ++
T Consensus 11 ~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~-------------------------~~ 64 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQV-------------------------LE 64 (350)
T ss_dssp CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHH-------------------------GG
T ss_pred CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHH-------------------------Hh
Confidence 4567776555554455557789999999999 9888887 5544222 22
Q ss_pred c-eEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCC
Q psy7938 89 L-KVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPE 167 (305)
Q Consensus 89 ~-~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~ 167 (305)
+ .|.|++|||+ ++..+|++|||. ++||+++|+.|. ...| .|.++.+.|.+|+.+.+.
T Consensus 65 ~~~v~~~~Vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~-~~~~---~G~~~~~~l~~~i~~~~~-------------- 122 (350)
T 1sji_A 65 HKDIGFVMVDAK--KEAKLAKKLGFD--EEGSLYVLKGDR-TIEF---DGEFAADVLVEFLLDLIE-------------- 122 (350)
T ss_dssp GSSEEEEEEETT--TTHHHHHHHTCC--STTEEEEEETTE-EEEE---CSCCCHHHHHHHHHTTSS--------------
T ss_pred hcCcEEEEEeCC--CCHHHHHhcCCC--ccceEEEEECCc-EEEe---cCCCCHHHHHHHHHHhcC--------------
Confidence 3 5999999999 889999999998 999999998876 4566 478999999999988742
Q ss_pred ccccCCcEEec-ccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCccccc
Q psy7938 168 DWDKNAVKVLV-ASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFP 246 (305)
Q Consensus 168 ~~~~~~v~~l~-~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~P 246 (305)
..+..++ .+++++++...++.++|.|+++||.. ..+.|.++|..+++ ++.|+.++ +..-++.++++ +|
T Consensus 123 ----~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~--~~~f~~~~-~~~~~~~~~v~-~p 191 (350)
T 1sji_A 123 ----DPVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQP--YIKFFATF-DKGVAKKLSLK-MN 191 (350)
T ss_dssp ----CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTT--TSEEEEEC-CHHHHHHHTCC-TT
T ss_pred ----CcceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHHHhhcc--CcEEEEEC-CHHHHHHcCCC-CC
Confidence 1266674 46788877414567899999998654 56889999999964 67787764 22234788998 99
Q ss_pred EEEEEeCCCceEEeeeCC-CCHHHHHHHHHhcCC
Q psy7938 247 TLKLYAKDDNRVIDYNGE-RVLEALSNFVESGGK 279 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~-~~~~~l~~fi~~~~~ 279 (305)
++++|++++..+..|.|. .+.+.|.+||.++..
T Consensus 192 ~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 225 (350)
T 1sji_A 192 EVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQR 225 (350)
T ss_dssp CEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCC
T ss_pred cEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCc
Confidence 999999865457889997 999999999998764
No 12
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.89 E-value=1e-23 Score=192.05 Aligned_cols=209 Identities=12% Similarity=0.245 Sum_probs=142.8
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
.+++.++.++|+....+.+.+++.||||||+||+.+.|.|.+++..++.- ....+.|.|++
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~-------------------~~~~~~v~~~~ 65 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEE-------------------FPNENQVVFAR 65 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTC-------------------C---CCEEEEE
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhh-------------------cCCCCceEEEE
Confidence 35667776677655566678999999999999999999988875444210 00035699999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCce-eccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCc
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMA-KYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAV 174 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~-~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v 174 (305)
|||+ ++..+|++|||. ++||+++|+.|.... .| .|.++.+.|.+|+.+.+... +
T Consensus 66 Vd~~--~~~~l~~~~~v~--~~Pt~~~f~~G~~~~~~~---~G~~~~~~l~~~i~~~~~~~------------------v 120 (382)
T 2r2j_A 66 VDCD--QHSDIAQRYRIS--KYPTLKLFRNGMMMKREY---RGQRSVKALADYIRQQKSDP------------------I 120 (382)
T ss_dssp EETT--TCHHHHHHTTCC--EESEEEEEETTEEEEEEC---CSCCSHHHHHHHHHHHHSCC------------------C
T ss_pred EECC--ccHHHHHhcCCC--cCCEEEEEeCCcEeeeee---cCcchHHHHHHHHHHhccCC------------------c
Confidence 9999 889999999998 999999999886544 36 47899999999999997421 4
Q ss_pred EEecc-cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEEEEeC
Q psy7938 175 KVLVA-SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLKLYAK 253 (305)
Q Consensus 175 ~~l~~-~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~f~~ 253 (305)
..+++ +++.+ + ..++.++|.|++++|.++ .+.|.++|..+++ .+.|+.... .....++++++| +++++.
T Consensus 121 ~~l~~~~~l~~-l-~~~~~~~v~ff~~~~~~~---~~~f~~~A~~~~~--~~~F~~~~~--~~~~~~~v~~~p-i~~~~~ 190 (382)
T 2r2j_A 121 QEIRDLAEITT-L-DRSKRNIIGYFEQKDSDN---YRVFERVANILHD--DCAFLSAFG--DVSKPERYSGDN-IIYKPP 190 (382)
T ss_dssp EEC--------------CCEEEEEESCSSSHH---HHHHHHHHHHHTT--TCEEEEEES--CC--------CE-EEEECS
T ss_pred eecCCHHHHHH-h-cCCCCEEEEEECCCCChh---HHHHHHHHHHhhc--cceEEEEeh--hhHHhhCCCCCc-eEECCC
Confidence 44432 45666 3 456788999999887653 5679999999965 456655554 234678899999 666554
Q ss_pred CC-ceEEeeeCCC-CHHHHHHHHHhcC
Q psy7938 254 DD-NRVIDYNGER-VLEALSNFVESGG 278 (305)
Q Consensus 254 g~-~~~~~~~g~~-~~~~l~~fi~~~~ 278 (305)
+. .....|.|.. +.+.|.+||+.+.
T Consensus 191 ~~~~~~~~y~g~~~~~~~l~~fi~~~~ 217 (382)
T 2r2j_A 191 GHSAPDMVYLGAMTNFDVTYNWIQDKC 217 (382)
T ss_dssp SSSSCCEECCSCTTCHHHHHHHHHHHH
T ss_pred CCCCcCcccCCCCCCHHHHHHHHHhcc
Confidence 32 2378899988 9999999999875
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9.7e-24 Score=185.71 Aligned_cols=208 Identities=15% Similarity=0.230 Sum_probs=155.5
Q ss_pred cCceecCCCCCCCCh-hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 16 EDMAKYKPATPEINV-DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
..+++++.++|+..+ ++...+++.|||+||++|+.+.|.|.++ +..+++.+.|+
T Consensus 17 ~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~l-------------------------a~~~~~~~~~~ 71 (298)
T 3ed3_A 17 PHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKA-------------------------AKRLDGVVQVA 71 (298)
T ss_dssp TTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTSEEE
T ss_pred CCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHccCCcEEE
Confidence 456666555555443 2345688899999999999999988887 34445668899
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC-----------------ceeccCCCCCCCHHHHHHHHHHHHcCccc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED-----------------MAKYKPATPEISVDTVRSFVTEFLAGNLK 157 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-----------------~~~~~~~~~~~~~~~l~~fv~~~~~~~~~ 157 (305)
.|||+..++.++|++|||. ++||+++|+.|+. ...| .|.++.+.|.+|+.+.+..
T Consensus 72 ~v~~d~~~~~~l~~~~~I~--~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y---~G~r~~~~i~~fl~~~~~~--- 143 (298)
T 3ed3_A 72 AVNCDLNKNKALCAKYDVN--GFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVY---SGARTLAPIVDFSLSRIRS--- 143 (298)
T ss_dssp EEETTSTTTHHHHHHTTCC--BSSEEEEEECCCC-------------CCCEEEEC---CSCCSHHHHHHHHHTTCCC---
T ss_pred EEEccCccCHHHHHhCCCC--ccceEEEEECCceeecccccccccccccccceee---cCCcCHHHHHHHHHHhccc---
Confidence 9999866779999999998 9999999998751 2445 4789999999999887431
Q ss_pred ccccCCCCCCccccCCcEEec-ccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc
Q psy7938 158 QHLLSQPLPEDWDKNAVKVLV-ASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE 236 (305)
Q Consensus 158 ~~~~s~~~p~~~~~~~v~~l~-~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~ 236 (305)
.+..++ .+++++++...++++++.|... ....+.|.++|..+.+ .+.|+.++...-.
T Consensus 144 ---------------~v~~i~~~~~l~~~l~~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~--~~~F~~v~~~~~a 201 (298)
T 3ed3_A 144 ---------------YVKKFVRIDTLGSLLRKSPKLSVVLFSKQ-----DKISPVYKSIALDWLG--KFDFYSISNKKLK 201 (298)
T ss_dssp ---------------CEEECSCGGGHHHHHTSCSSEEEEEEESS-----SSCCHHHHHHHHHTBT--TEEEEEEEGGGCC
T ss_pred ---------------ccEEcCCHHHHHHHHhcCCceEEEEEcCC-----CcchHHHHHHHHHhhc--CcEEEEEcchHhh
Confidence 266663 4678888865566777776432 2446899999999954 7889888744322
Q ss_pred c----ccCC-----c-------------ccccEEEEEeCCCceEEeeeC-CCCHHHHHHHHHhcC
Q psy7938 237 L----EHTK-----I-------------TSFPTLKLYAKDDNRVIDYNG-ERVLEALSNFVESGG 278 (305)
Q Consensus 237 ~----~~~~-----i-------------~~~Ptl~~f~~g~~~~~~~~g-~~~~~~l~~fi~~~~ 278 (305)
. .+++ | ...|++++|+.....+..|.| ..+.+.|.+||.++.
T Consensus 202 ~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~ 266 (298)
T 3ed3_A 202 QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTF 266 (298)
T ss_dssp CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhc
Confidence 1 2222 3 679999999986666999996 789999999999544
No 14
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.87 E-value=9.8e-23 Score=191.03 Aligned_cols=205 Identities=15% Similarity=0.198 Sum_probs=158.5
Q ss_pred CceecCCCCCCCChhHH---HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 17 DMAKYKPATPEINVDTV---RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~~~---~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
+++.++.++|+..+.+. ..+++.||||||+||+.+.|.|.+++ ..+++.+.|
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a-------------------------~~~~~~v~~ 56 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAA-------------------------TRLKGIVPL 56 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHH-------------------------HHTTTTCCE
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHH-------------------------HHhcCceEE
Confidence 35566666666444455 78999999999999999999888883 444566999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCC
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNA 173 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~ 173 (305)
++|||+ ++.++|++|||. ++||+++|+.|+....| .|.++.+.|.+|+.+.+.. .
T Consensus 57 ~~vd~~--~~~~l~~~~~v~--~~Ptl~~~~~g~~~~~~---~G~~~~~~l~~~~~~~~~~------------------~ 111 (481)
T 3f8u_A 57 AKVDCT--ANTNTCNKYGVS--GYPTLKIFRDGEEAGAY---DGPRTADGIVSHLKKQAGP------------------A 111 (481)
T ss_dssp EEEETT--TCHHHHHHTTCC--EESEEEEEETTEEEEEC---CSCSSHHHHHHHHHHHTSC------------------S
T ss_pred EEEECC--CCHHHHHhcCCC--CCCEEEEEeCCceeeee---cCccCHHHHHHHHHhhccc------------------C
Confidence 999999 889999999998 99999999988655666 4789999999999998531 2
Q ss_pred cEEe-cccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEEEEe
Q psy7938 174 VKVL-VASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLKLYA 252 (305)
Q Consensus 174 v~~l-~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~f~ 252 (305)
+..+ +.+++.+++ +.+..++|.|+.++|..| ...|.++|..+++ ++.|+.++ +..-...++++..| +++|+
T Consensus 112 ~~~i~~~~~~~~~~-~~~~~~vv~~~~~~~~~~---~~~f~~~a~~~~~--~~~F~~~~-~~~~~~~~~v~~~~-i~~~~ 183 (481)
T 3f8u_A 112 SVPLRTEEEFKKFI-SDKDASIVGFFDDSFSEA---HSEFLKAASNLRD--NYRFAHTN-VESLVNEYDDNGEG-IILFR 183 (481)
T ss_dssp EEEECSHHHHHHHT-TSSSCEEEEEESCTTCHH---HHHHHHHHHHHTT--TSCEEEEC-CHHHHHHHCSSSEE-EEEEC
T ss_pred ceecCCHHHHHHHH-hcCCcEEEEEECCCccch---HHHHHHHHHHhcc--CceEEEEC-CHHHHHHhCCCCCc-EEEEe
Confidence 6666 456777766 456788888998887654 6789999999964 56676543 33334788898766 77777
Q ss_pred ------CCCceEEeee-CCCCHHHHHHHHHhcCC
Q psy7938 253 ------KDDNRVIDYN-GERVLEALSNFVESGGK 279 (305)
Q Consensus 253 ------~g~~~~~~~~-g~~~~~~l~~fi~~~~~ 279 (305)
+.......|. |..+.+.|.+||..+..
T Consensus 184 p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~ 217 (481)
T 3f8u_A 184 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF 217 (481)
T ss_dssp CGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTT
T ss_pred cccccCccCCcccccCCCCCCHHHHHHHHHHhCC
Confidence 2222378898 78999999999999874
No 15
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.87 E-value=3.4e-22 Score=170.99 Aligned_cols=226 Identities=13% Similarity=0.169 Sum_probs=158.0
Q ss_pred EEeeccCceecCCCCCCCCh-hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCc
Q psy7938 11 LIRLEEDMAKYKPATPEINV-DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNL 89 (305)
Q Consensus 11 l~~~~~~~~~~~~~~~~~~~-~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (305)
||...+.+..++.++++..+ ++.+.+++.|||+||++|+.+.|.|.+++..+ ..+..
T Consensus 7 l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~----------------------~~~~~ 64 (244)
T 3q6o_A 7 LYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDV----------------------KAWRP 64 (244)
T ss_dssp CSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHT----------------------GGGTT
T ss_pred CCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHH----------------------HhccC
Confidence 45556677888766665333 33378899999999999999999988884444 22223
Q ss_pred eEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCce---eccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCC
Q psy7938 90 KVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMA---KYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLP 166 (305)
Q Consensus 90 ~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~---~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p 166 (305)
.+.|++|||+..++.++|++|||. ++||+++|+.|.... .+.. ++.+.+.|.+++.+.+...... .|
T Consensus 65 ~v~~~~vd~~~~~~~~l~~~~~v~--~~Pt~~~~~~g~~~~~g~~~~~--~g~~~~~l~~~i~~~l~~~~~~------~p 134 (244)
T 3q6o_A 65 ALYLAALDCAEETNSAVCRDFNIP--GFPTVRFFXAFTXNGSGAVFPV--AGADVQTLRERLIDALESHHDT------WP 134 (244)
T ss_dssp TEEEEEEETTSTTTHHHHHHTTCC--SSSEEEEECTTCCSSSCEECCC--TTCCHHHHHHHHHHHHHTCTTS------CC
T ss_pred cEEEEEEeCCchhhHHHHHHcCCC--ccCEEEEEeCCCcCCCCeeEec--CCCCHHHHHHHHHHHHHhcccc------CC
Confidence 799999999655889999999998 999999999864421 1211 3479999999999998754321 12
Q ss_pred CccccCCcEEecccChhHHHh-cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-ccCCccc
Q psy7938 167 EDWDKNAVKVLVASNFDEIAF-DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-EHTKITS 244 (305)
Q Consensus 167 ~~~~~~~v~~l~~~~f~~~v~-~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-~~~~i~~ 244 (305)
.. ...+..++..++..++. +..+.+.+.|....|. ...+++..+.....+.+..++-..... ++|+|++
T Consensus 135 ~~--~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~~-------~~~~~~~d~~~~~~i~v~~~~~~~~~l~~~f~v~~ 205 (244)
T 3q6o_A 135 PA--CPPLEPAXLEEIDGFFARNNEEYLALIFEXGGSY-------LAREVALDLSQHKGVAVRRVLNTEANVVRKFGVTD 205 (244)
T ss_dssp TT--SCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTCC-------HHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCCC
T ss_pred CC--CCCcccccHHHHHHHhhcCCCceEEEEEEECCcc-------hHHHHHHHhccCCceEEEEEeCchHHHHHHcCCCC
Confidence 11 11234445566666653 4456777778776543 345566677666778888877654444 8999999
Q ss_pred ccEEEEEeCCCceEEeeeC-CCCHHHHHHHHHhcC
Q psy7938 245 FPTLKLYAKDDNRVIDYNG-ERVLEALSNFVESGG 278 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~g-~~~~~~l~~fi~~~~ 278 (305)
+|++++|.++++ ...+.. ..+.+.+..+|++-.
T Consensus 206 ~Pslvl~~~~g~-~~~~~~~~~~r~~~~~~l~~~~ 239 (244)
T 3q6o_A 206 FPSCYLLFRNGS-VSRVPVLMESRSFYTAYLQRLS 239 (244)
T ss_dssp SSEEEEEETTSC-EEECCCSSSSHHHHHHHHHTC-
T ss_pred CCeEEEEeCCCC-eEeeccccccHHHHHHHHHhCC
Confidence 999999998887 555554 556677777777654
No 16
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.86 E-value=3.3e-21 Score=148.02 Aligned_cols=108 Identities=28% Similarity=0.533 Sum_probs=96.2
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhC---CCCceEEEEEeCCcccc--ccCCcccc
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFA---DRDDITIAKIDATVNEL--EHTKITSF 245 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~---~~~~v~~~~id~~~~~~--~~~~i~~~ 245 (305)
.+.|..|++++|++.+.+++++++|.||++||++|+.+.|.|+++++.+. ..+++.++++|++.+.. .+++|+++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~ 93 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGF 93 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccC
Confidence 34599999999999997778999999999999999999999999998874 23579999999998864 89999999
Q ss_pred cEEEEEeCCCce-EEeeeCCCCHHHHHHHHHhcC
Q psy7938 246 PTLKLYAKDDNR-VIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 246 Ptl~~f~~g~~~-~~~~~g~~~~~~l~~fi~~~~ 278 (305)
||+++|++|++. +..|.|.++.+.|.+||.+++
T Consensus 94 Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~s 127 (127)
T 3h79_A 94 PTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQNT 127 (127)
T ss_dssp SEEEEECSSCSSSCEECCSCCCHHHHHHHHHHHC
T ss_pred CEEEEEeCCCCCCceEecCCccHHHHHHHHHhcC
Confidence 999999988764 588999999999999998763
No 17
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.83 E-value=3.8e-20 Score=137.31 Aligned_cols=99 Identities=26% Similarity=0.544 Sum_probs=85.4
Q ss_pred cEEec-ccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVLV-ASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l~-~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
|..+. .++|++.+.+ .+++++|.|||+||++|+.+.|.|+++++.+. ++.++++|++.+.. ++|+|+++||++
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~---~~~~~~vd~d~~~~l~~~~~V~~~PT~~ 78 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS---DVVFLKVDVDECEDIAQDNQIACMPTFL 78 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCBSSEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC---CeEEEEEecccCHHHHHHcCCCeecEEE
Confidence 44553 4789988854 46899999999999999999999999999884 68999999998875 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.| .+.+.|.+||+++
T Consensus 79 ~~~~G~~-v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 79 FMKNGQK-LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp EEETTEE-EEEEES-CCHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeC-cCHHHHHHHHHhc
Confidence 9998755 788888 4899999999986
No 18
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.83 E-value=9.3e-21 Score=178.01 Aligned_cols=225 Identities=12% Similarity=0.157 Sum_probs=157.9
Q ss_pred EEeeccCceecCCCCCCCCh-hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCc
Q psy7938 11 LIRLEEDMAKYKPATPEINV-DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNL 89 (305)
Q Consensus 11 l~~~~~~~~~~~~~~~~~~~-~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (305)
+|...+.+..++.++|+..+ ++.+.++++|||+||++|+.+.|.+.+++..+ ..+..
T Consensus 7 Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~----------------------~~~~~ 64 (519)
T 3t58_A 7 LYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDV----------------------KDWRP 64 (519)
T ss_dssp SCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHH----------------------GGGTT
T ss_pred cCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHh----------------------hCcCC
Confidence 34445667778766665333 33478899999999999999999998884444 22224
Q ss_pred eEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC----ceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCC
Q psy7938 90 KVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED----MAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPL 165 (305)
Q Consensus 90 ~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~----~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~ 165 (305)
.+.|++|||+.+++.++|++|||. ++||+++|+.|.. ...+ .|.++.++|++++.+.+...... .
T Consensus 65 ~v~~~~VD~d~d~~~~l~~~~~V~--~~PTl~~f~~g~~~G~~~~~~---~g~~~~~~L~~~l~~~l~~~~~~------~ 133 (519)
T 3t58_A 65 ALNLAVLDCAEETNSAVCREFNIA--GFPTVRFFQAFTKNGSGATLP---GAGANVQTLRMRLIDALESHRDT------W 133 (519)
T ss_dssp TEEEEEEETTSGGGHHHHHHTTCC--SBSEEEEECTTCCSCCCEEEC---CSSCCHHHHHHHHHHHHTTCCSC------C
T ss_pred cEEEEEEECCccccHHHHHHcCCc--ccCEEEEEcCcccCCCceeEe---cCCCCHHHHHHHHHHHHhhcccc------C
Confidence 799999999755789999999998 9999999996532 1222 36689999999999998653211 1
Q ss_pred CCccccCCcEEecccChhHHHh-cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-ccCCcc
Q psy7938 166 PEDWDKNAVKVLVASNFDEIAF-DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-EHTKIT 243 (305)
Q Consensus 166 p~~~~~~~v~~l~~~~f~~~v~-~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-~~~~i~ 243 (305)
|.. ...+..++..++.+++. +..+.+++.|.... .....+++..+....++.+..++.+.... ++|+|+
T Consensus 134 P~~--~p~l~~it~~~l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~~~~~~l~~kfgV~ 204 (519)
T 3t58_A 134 PPA--CPPLEPAKLNDIDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVLNTESDLVNKFGVT 204 (519)
T ss_dssp CTT--CCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEETTCHHHHHHHTCC
T ss_pred CCC--CCccCcCCHHHHHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEecCchHHHHHHcCCC
Confidence 111 11244555666666653 34567778888764 23667888888776788888777554444 899999
Q ss_pred cccEEEEEeCCCceEEeeeCCC-CHHHHHHHHHhcC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGER-VLEALSNFVESGG 278 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~-~~~~l~~fi~~~~ 278 (305)
.+|++++|.++++ ...+.... ....+..++.+..
T Consensus 205 ~~Pslvl~~~nGk-~~~~~v~~~~r~~~~~~l~~l~ 239 (519)
T 3t58_A 205 DFPSCYLLLRNGS-VSRVPVLVESRSFYTSYLRGLP 239 (519)
T ss_dssp CSSEEEEEETTSC-EEECCCSSCSHHHHHHHHTTST
T ss_pred CCCeEEEEeCCCc-eeecccccccHHHHHHHHHHcc
Confidence 9999999999887 44444433 3455667777633
No 19
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.83 E-value=9.3e-21 Score=178.59 Aligned_cols=200 Identities=13% Similarity=0.192 Sum_probs=153.9
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCc-eEEE
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNL-KVLF 93 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~ 93 (305)
+++++.++.++|+..+++...+++.||||||+||+.+.|.|.+++ ..+++ .|.|
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a-------------------------~~~~~~~v~~ 67 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAA-------------------------ETLVEKNITL 67 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHH-------------------------HHTTTTTCEE
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHH-------------------------HHhccCCeEE
Confidence 467888887777766666778999999999999999999988873 33345 4999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC--ceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCcccc
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED--MAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDK 171 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~--~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~ 171 (305)
++|||+ ++..+|++|||. ++||+++|+.|.. ...| .|.++.+.|.+|+.+.+..
T Consensus 68 ~~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~~~~~~~~---~G~~~~~~l~~~l~~~~~~----------------- 123 (504)
T 2b5e_A 68 AQIDCT--ENQDLCMEHNIP--GFPSLKIFKNSDVNNSIDY---EGPRTAEAIVQFMIKQSQP----------------- 123 (504)
T ss_dssp EEEETT--TCHHHHHHTTCC--SSSEEEEEETTCTTCEEEC---CSCCSHHHHHHHHHHHTSC-----------------
T ss_pred EEEECC--CCHHHHHhcCCC--cCCEEEEEeCCccccceee---cCCCCHHHHHHHHHHhcCC-----------------
Confidence 999999 889999999998 9999999998875 5666 4789999999999999631
Q ss_pred CCcEEecccChhHHHhcCC-CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKS-KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLKL 250 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~-~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~ 250 (305)
.+..+++ +++++...+ ..++|.|+.+..+ ...+.|.++|..++ +++.|+.++ ...+.++++ +++
T Consensus 124 -~v~~i~~--~~~~~~~~~~~~~~v~~f~~~~~---~~~~~f~~~A~~~~--~~~~F~~~~---~~~~~~~~~----i~l 188 (504)
T 2b5e_A 124 -AVAVVAD--LPAYLANETFVTPVIVQSGKIDA---DFNATFYSMANKHF--NDYDFVSAE---NADDDFKLS----IYL 188 (504)
T ss_dssp -SEEECSC--HHHHHHHSCCSSCEEEEEESCCH---HHHHHHHHHHHHTT--TTCEEEEEE---CTTSCCEEE----EEE
T ss_pred -cceeHHH--HHHHHhcCCCceEEEEEeCCCCc---hHHHHHHHHHHHhh--cCcEEEEEH---HHHHhcCCe----EEe
Confidence 2666765 777775444 1455555555544 45678999999995 467787776 233666665 777
Q ss_pred EeCCCceEEeeeCC-C---CHHHHHHHHHhcCC
Q psy7938 251 YAKDDNRVIDYNGE-R---VLEALSNFVESGGK 279 (305)
Q Consensus 251 f~~g~~~~~~~~g~-~---~~~~l~~fi~~~~~ 279 (305)
|++.. .+..|.|. . +.+.|.+||..+..
T Consensus 189 ~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~ 220 (504)
T 2b5e_A 189 PSAMD-EPVVYNGKKADIADADVFEKWLQVEAL 220 (504)
T ss_dssp TTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSS
T ss_pred cCCCC-cccccCCcccccCCHHHHHHHHHhccc
Confidence 77643 47889997 5 99999999998754
No 20
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.82 E-value=6.2e-20 Score=139.37 Aligned_cols=111 Identities=47% Similarity=0.921 Sum_probs=97.8
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC---CCceEEEEEeCCccccccCCccccc
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD---RDDITIAKIDATVNELEHTKITSFP 246 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~---~~~v~~~~id~~~~~~~~~~i~~~P 246 (305)
+.+.|..+++++|.+.+..++++++|.||++||++|+.+.|.|+++++.+++ ..++.++.+|++.+...+ +|.++|
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-~v~~~P 83 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATANDVPD-EIQGFP 83 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSCCSS-CCSSSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccccccc-ccCcCC
Confidence 4456999999999998767789999999999999999999999999999975 247999999999888755 999999
Q ss_pred EEEEEeCCCce-EEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 247 TLKLYAKDDNR-VIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 247 tl~~f~~g~~~-~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
|+++|++|++. +.++.|..+.+.|.+||+++...+
T Consensus 84 t~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (121)
T 2djj_A 84 TIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKYK 119 (121)
T ss_dssp EEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSSC
T ss_pred eEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCcC
Confidence 99999988663 678999999999999999887543
No 21
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=1.2e-19 Score=140.12 Aligned_cols=113 Identities=45% Similarity=0.887 Sum_probs=98.1
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
+.+.|..+++++|.+.+.+.+++++|.||++||++|+.+.|.|++++..+....++.++.+|++.+.. ..|+|.++||
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 34569999999999988767899999999999999999999999999999765689999999998775 6799999999
Q ss_pred EEEEeCCCce-EEeee-CCCCHHHHHHHHHhcCCCCC
Q psy7938 248 LKLYAKDDNR-VIDYN-GERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 248 l~~f~~g~~~-~~~~~-g~~~~~~l~~fi~~~~~~~~ 282 (305)
+++|++|+.. .+.|. |..+.+.|.+||++......
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~~ 121 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKRS 121 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSCS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhccccc
Confidence 9999988653 45788 56899999999999876543
No 22
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.80 E-value=8.6e-20 Score=140.16 Aligned_cols=103 Identities=13% Similarity=0.104 Sum_probs=93.7
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCC--hhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWC--GHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C--~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
....++.++|++.+..++++++|+||++|| ++|+.+.|.++++++++. +++.++++|.+.+.. .+|+|.++||+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~--~~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFP--GRLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST--TTEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc--CCcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 367899999999997666799999999999 999999999999999995 589999999999886 89999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|++|+. +.+..|..+.+.|.++|++..
T Consensus 94 ilFkdG~~-v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 94 AVVQPERT-LGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEEECCEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 99999866 889999999999999998765
No 23
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.79 E-value=5.6e-19 Score=137.78 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=88.7
Q ss_pred cEEecc-cChhHHHh-cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVLVA-SNFDEIAF-DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l~~-~~f~~~v~-~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
|..|+. .+|++.+. .++++++|.|||+||++|+.+.|.++++|+++. +.+.|+++|.+++.. .+|+|.++||++
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~--~~v~f~kVDVDe~~e~a~~y~V~siPT~~ 100 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIK--NFCVIYLVDITEVPDFNTMYELYDPVSVM 100 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT--TTEEEEEEETTTCCTTTTTTTCCSSEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHcc--CCcEEEEEECCCCHHHHHHcCCCCCCEEE
Confidence 666644 88998886 478899999999999999999999999999995 469999999999886 899999999999
Q ss_pred EEeCCCceE-E-------eeeCCCC-HHHHHHHHHhcC
Q psy7938 250 LYAKDDNRV-I-------DYNGERV-LEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~-~-------~~~g~~~-~~~l~~fi~~~~ 278 (305)
+|++|+... . +..|... .+.|.++|++..
T Consensus 101 fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~ 138 (160)
T 2av4_A 101 FFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIF 138 (160)
T ss_dssp EEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHH
Confidence 999986521 3 6889876 899999998764
No 24
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.79 E-value=1.5e-18 Score=131.20 Aligned_cols=103 Identities=16% Similarity=0.246 Sum_probs=89.6
Q ss_pred CCcEEecccChhHHHhcCCC--cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSK--HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~--~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~ 249 (305)
+.|.+++.++|.+.+.++++ +++|+||++||++|+.+.|.++++|+.+. ++.|+++|++.. ..+|+|.++||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~---~v~f~kvd~d~~-~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP---ETKFVKAIVNSC-IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT---TSEEEEEEGGGT-STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC---CCEEEEEEhHHh-HHHCCCCCCCEEE
Confidence 35888999999998866554 89999999999999999999999999984 589999999886 5899999999999
Q ss_pred EEeCCCceEEeeeCCC-------CHHHHHHHHHhcCC
Q psy7938 250 LYAKDDNRVIDYNGER-------VLEALSNFVESGGK 279 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~-------~~~~l~~fi~~~~~ 279 (305)
+|++|.. ..++.|.. +.+.|..+|.+..-
T Consensus 79 ~fk~G~~-v~~~~G~~~~gg~~~~~~~le~~L~~~g~ 114 (118)
T 3evi_A 79 VYKNGQI-EAKFIGIIECGGINLKLEELEWKLAEVGA 114 (118)
T ss_dssp EEETTEE-EEEEESTTTTTCSSCCHHHHHHHHHTTTS
T ss_pred EEECCEE-EEEEeChhhhCCCCCCHHHHHHHHHHcCC
Confidence 9998865 77888853 68999999987654
No 25
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.79 E-value=7.9e-19 Score=130.97 Aligned_cols=104 Identities=13% Similarity=0.338 Sum_probs=93.8
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
..|..++.++|.+.+.+++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+.. .+++|.++||++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE--SFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC--ceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 45899999999999977789999999999999999999999999999953 69999999998875 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|+. ..++.|..+.+.|.+||++..
T Consensus 82 ~~~~g~~-~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 82 YFKDGEY-KGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EEETTEE-EEEEESSCCHHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeccCCHHHHHHHHHHHh
Confidence 9987754 778999999999999998753
No 26
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.79 E-value=9.8e-19 Score=136.23 Aligned_cols=114 Identities=39% Similarity=0.731 Sum_probs=97.8
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcccc--ccCCccccc
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR-DDITIAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~~~--~~~~i~~~P 246 (305)
..+.|..++.++|.+.+ ..++.++|+||++||++|+.+.|.|.++++.+.+. .++.++.+|++.+.. .+|+|.++|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 45569999999999987 45789999999999999999999999999999643 359999999998764 889999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCCCCC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGLPSG 286 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~~~~ 286 (305)
|+++|++|+ ...|.|..+.+.|.+||++....+..+.+
T Consensus 94 t~~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~~~~~ 131 (140)
T 2dj1_A 94 TIKILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDWTPPP 131 (140)
T ss_dssp EEEEEETTE--EEECCSCCCHHHHHHHHHHHHSSSCCCCS
T ss_pred eEEEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCCCCCC
Confidence 999997663 78899999999999999998765554433
No 27
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.79 E-value=8.4e-19 Score=130.76 Aligned_cols=104 Identities=35% Similarity=0.659 Sum_probs=93.0
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR-DDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
+.|..++.++|++.+. +++++|.||++||++|+.+.|.|.++++.+... .++.++.+|++.+.. ++++|+++||+
T Consensus 5 ~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (111)
T 3uvt_A 5 STVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTL 82 (111)
T ss_dssp CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEE
Confidence 3489999999999986 789999999999999999999999999987543 579999999998764 89999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|++|+. ..++.|..+.+.|.+||++++
T Consensus 83 ~~~~~g~~-~~~~~g~~~~~~l~~~l~~~a 111 (111)
T 3uvt_A 83 LLFRGGKK-VSEHSGGRDLDSLHRFVLSQA 111 (111)
T ss_dssp EEEETTEE-EEEECSCCSHHHHHHHHHHHC
T ss_pred EEEeCCcE-EEeccCCcCHHHHHHHHHhcC
Confidence 99987754 788999999999999998763
No 28
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.79 E-value=1.9e-18 Score=129.51 Aligned_cols=105 Identities=29% Similarity=0.454 Sum_probs=93.2
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+ .+++++|.||++||++|+.+.|.++++++.+++ ++.++.+|++.+.. ++++|.++||+++|
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 78 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD--KLKIVKIDVDENQETAGKYGVMSIPTLLVL 78 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT--TCEEEEEETTTCCSHHHHTTCCSBSEEEEE
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCCcccEEEEE
Confidence 7789999999988 788999999999999999999999999999963 69999999998775 88999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
++| +...++.|..+.+.|.+|+.++...+..
T Consensus 79 ~~G-~~~~~~~G~~~~~~l~~~l~~~~~~~~~ 109 (112)
T 2voc_A 79 KDG-EVVETSVGFKPKEALQELVNKHLLEHHH 109 (112)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHTTSCSCCC
T ss_pred eCC-EEEEEEeCCCCHHHHHHHHHHHHHhhcc
Confidence 665 4478899999999999999988765543
No 29
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.78 E-value=1.2e-19 Score=139.89 Aligned_cols=106 Identities=14% Similarity=0.082 Sum_probs=93.4
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCC--ChhhhhHHHHHHHHHHHhCCCCc-eEEEEEeCCcccc--ccCCcccccEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPW--CGHCKQLAPIYDKLGEKFADRDD-ITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~--C~~C~~~~~~~~~la~~~~~~~~-v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
+..+++++|++.+. ++++++|+||++| |++|+.+.|.+++++++|. ++ +.|+++|.+.+.. .+|+|.++||+
T Consensus 19 ~~~~t~~~F~~~v~-~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~--g~~v~~~KVdvDe~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 19 WTPVSESRLDDWLT-QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFP--DYTWQVAIADLEQSEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CEECCHHHHHHHHH-TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCT--TSCCEEEECCHHHHHHHHHHHTCCSSSEE
T ss_pred CccCCHHHHHHHHh-CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcC--CCeEEEEEEECCCCHHHHHHcCCccCCEE
Confidence 77899999999994 7789999999999 9999999999999999995 46 9999999998886 89999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
++|++|+. +.+..|..+.+.|.+||++....++.
T Consensus 96 ilFk~G~~-v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 96 LVFTGGNY-RGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EEEETTEE-EEEEESCCCHHHHHHHHHHHHC----
T ss_pred EEEECCEE-EEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 99999866 88999999999999999987743333
No 30
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.78 E-value=1.8e-18 Score=128.43 Aligned_cols=102 Identities=27% Similarity=0.563 Sum_probs=91.4
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.|..++.++|.+.+.+++++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+.. +.++|.++||+++
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLLL 80 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCTTHHHHTTCCSSSEEEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCC--CcEEEEEECCCCHHHHHHcCCcccCEEEE
Confidence 4889999999988877889999999999999999999999999999953 69999999998765 8899999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++|+. ..++.|..+.+.|.+||++.
T Consensus 81 ~~~G~~-~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 81 FKNGEV-AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp EETTEE-EEEEESCCCHHHHHHHHHHH
T ss_pred EeCCEE-EEEEecCCCHHHHHHHHHHh
Confidence 976643 77899999999999999875
No 31
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=5.3e-19 Score=135.96 Aligned_cols=107 Identities=32% Similarity=0.620 Sum_probs=96.1
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
.+.|..++.++|.+.+..++++++|.||++||++|+.+.|.|+++++.+.+ .+.++.+|++.+.. .+++|.++||+
T Consensus 16 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 16 SDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKD--VVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp TSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcC--ceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 456999999999998877889999999999999999999999999999953 59999999998764 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
++|++|+..+..+.|..+.+.|.+||.+...
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 9999887657889999999999999998753
No 32
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.78 E-value=8e-19 Score=135.37 Aligned_cols=108 Identities=32% Similarity=0.639 Sum_probs=95.5
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC--CCceEEEEEeCCcccc--ccCCccccc
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD--RDDITIAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~--~~~v~~~~id~~~~~~--~~~~i~~~P 246 (305)
.+.|..++.++|.+.+.+++++++|.||++||++|+.+.|.|.+++..+.. .+++.++.+|++.+.. .+++|.++|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 85 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFP 85 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSS
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeC
Confidence 345999999999998877789999999999999999999999999999851 1469999999998764 889999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
|+++|++|+ ...++.|..+.+.|.+||.+...
T Consensus 86 t~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~ 117 (133)
T 1x5d_A 86 TIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFS 117 (133)
T ss_dssp EEEEEETTE-EEEEECSCCSHHHHHHHHHHHHH
T ss_pred eEEEEeCCC-ceEEecCCCCHHHHHHHHHHHhh
Confidence 999999965 48889999999999999998754
No 33
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=4.4e-18 Score=125.95 Aligned_cols=102 Identities=31% Similarity=0.542 Sum_probs=91.5
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.|..++.++|.+.+...+++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+.. +.++|.++||+++
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 80 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG--KVTVAKVNIDDNPETPNAYQVRSIPTLML 80 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT--SEEEEEEETTTCCHHHHHTTCCSSSEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC--cEEEEEEECCCCHHHHHhcCCCccCEEEE
Confidence 4889999999988877889999999999999999999999999999963 79999999998774 8899999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++|.. ..++.|..+.+.|.+||++.
T Consensus 81 ~~~G~~-~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 81 VRDGKV-IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp EETTEE-EEEEESCCCHHHHHHHHHHT
T ss_pred EeCCEE-EEEecCCCCHHHHHHHHHhc
Confidence 966643 77899999999999999875
No 34
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.77 E-value=5.5e-18 Score=130.25 Aligned_cols=103 Identities=26% Similarity=0.530 Sum_probs=91.8
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.|..++.++|.+.+.+.+++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+.. ..++|.++||++
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 99 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPTLL 99 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTT--TEEEEEEETTTCCTTSGGGTCCSSSEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CeEEEEEECCCCHHHHHHcCCCccCEEE
Confidence 34899999999988877889999999999999999999999999999953 69999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|. ...++.|..+.+.|.+||++.
T Consensus 100 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 100 LFKNGE-VAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEeCCE-EEEEEcCCCCHHHHHHHHHHh
Confidence 996654 377899999999999999864
No 35
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.77 E-value=4.9e-18 Score=125.46 Aligned_cols=100 Identities=27% Similarity=0.479 Sum_probs=90.5
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.+..++.++|.+.+ .+++++|.||++||++|+.+.|.++++++.+++ ++.++.+|++.+.. +.++|.++||+++
T Consensus 4 ~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 79 (106)
T 3die_A 4 AIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEG--KADILKLDVDENPSTAAKYEVMSIPTLIV 79 (106)
T ss_dssp CCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSBSEEEE
T ss_pred ceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcC--CcEEEEEECCcCHHHHHhCCCcccCEEEE
Confidence 48899999999988 789999999999999999999999999999964 59999999988775 8999999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++|+. ..++.|..+.+.|.+||++.
T Consensus 80 ~~~G~~-~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 80 FKDGQP-VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp EETTEE-EEEEESCCCHHHHHHHHHTT
T ss_pred EeCCeE-EEEEeCCCCHHHHHHHHHHh
Confidence 986644 77899999999999999864
No 36
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.77 E-value=4.3e-18 Score=132.17 Aligned_cols=112 Identities=23% Similarity=0.397 Sum_probs=95.0
Q ss_pred cCCcEEecccChhHHHhc-----------CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--
Q psy7938 171 KNAVKVLVASNFDEIAFD-----------KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-- 237 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~-----------~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-- 237 (305)
...|..++.++|.+.+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+..
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~ 85 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDG--QIVIYKVDTEKEQELA 85 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHH
Confidence 345899999999998854 468999999999999999999999999999953 69999999998764
Q ss_pred ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCCCC
Q psy7938 238 EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGLPS 285 (305)
Q Consensus 238 ~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~~~ 285 (305)
..++|.++||+++|+++++ ...+.|..+.+.|.+||++........+
T Consensus 86 ~~~~v~~~Pt~~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 132 (136)
T 2l5l_A 86 GAFGIRSIPSILFIPMEGK-PEMAQGAMPKASFKKAIDEFLLKKEGHH 132 (136)
T ss_dssp HHTTCCSSCEEEEECSSSC-CEEEESCCCHHHHHHHHHHHHTSCTTSS
T ss_pred HHcCCCCCCEEEEECCCCc-EEEEeCCCCHHHHHHHHHHHhhccCCCC
Confidence 8899999999999955555 3489999999999999998865544433
No 37
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=6.3e-18 Score=131.19 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=96.2
Q ss_pred cCCcEEecccChhHHHhcC--CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEE
Q psy7938 171 KNAVKVLVASNFDEIAFDK--SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTL 248 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~--~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl 248 (305)
.+.|..++.++|.+.+... +++++|+||++||++|+.+.|.|++++..+. ++.|+.||++.+. ..|+|.++||+
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~---~v~~~~vd~~~~~-~~~~i~~~Pt~ 84 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP---ETKFVKAIVNSCI-EHYHDNCLPTI 84 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS---SEEEEEECCSSSC-SSCCSSCCSEE
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC---CcEEEEEEhhcCc-ccCCCCCCCEE
Confidence 3458899999999988543 3689999999999999999999999999983 6999999998765 78999999999
Q ss_pred EEEeCCCceEEeeeCCC-------CHHHHHHHHHhcCCCCCCCCCCCCCc
Q psy7938 249 KLYAKDDNRVIDYNGER-------VLEALSNFVESGGKEGGLPSGAQQGK 291 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~-------~~~~l~~fi~~~~~~~~~~~~~~~~~ 291 (305)
++|++|+. ..++.|.. +.+.|.++|.++...+.....+++++
T Consensus 85 ~~~~~G~~-v~~~~G~~~~~~~~~~~~~l~~~l~~~~~i~~~~~~~~~~~ 133 (135)
T 2dbc_A 85 FVYKNGQI-EGKFIGIIECGGINLKLEELEWKLSEVGAIQSDLEENSGPS 133 (135)
T ss_dssp EEESSSSC-SEEEESTTTTTCTTCCHHHHHHHHHHHTSSCCCSCCCSCSS
T ss_pred EEEECCEE-EEEEEeEEeeCCCcCCHHHHHHHHHHcCCccccccCCCCCC
Confidence 99997755 77888865 78999999999876655444444443
No 38
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.76 E-value=2.9e-18 Score=133.77 Aligned_cols=107 Identities=26% Similarity=0.430 Sum_probs=93.5
Q ss_pred ccCCcEEecccChhHHHhc-----------CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-
Q psy7938 170 DKNAVKVLVASNFDEIAFD-----------KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL- 237 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~-----------~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~- 237 (305)
..+.+..++..+|...+.+ .+++++|.||++||++|+.+.|.|.+++..+.+ ++.++.+|++.+..
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAG--KIYIYKVNVDKEPEL 97 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHH
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcC--ceEEEEEECCCCHHH
Confidence 4456999999999998865 578999999999999999999999999999963 69999999998765
Q ss_pred -ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 238 -EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 238 -~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
..|+|.++||+++|++++. +.++.|..+.+.|.+||++...
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGE-PQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSC-CEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHcCCCCcCEEEEEeCCCC-EEEEeCCCCHHHHHHHHHHHHc
Confidence 8999999999999987776 5699999999999999998754
No 39
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.76 E-value=5.2e-18 Score=126.83 Aligned_cols=104 Identities=27% Similarity=0.516 Sum_probs=92.2
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.|..++.++|.+.+.+++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+.. +.++|.++||++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 82 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGD--KIEIVKLNIDENPGTAAKYGVMSIPTLN 82 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcC--CeEEEEEEcCCCHHHHHhCCCCcccEEE
Confidence 35899999999998877889999999999999999999999999999953 69999999988764 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|+. ..++.|..+.+.|.+||++..
T Consensus 83 ~~~~G~~-~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 83 VYQGGEV-AKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp EEETTEE-EEEEESCCCHHHHHHHTHHHH
T ss_pred EEeCCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 9976644 778999999999999998753
No 40
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.76 E-value=3.6e-18 Score=133.30 Aligned_cols=105 Identities=21% Similarity=0.395 Sum_probs=94.1
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
.+.|..++.++|.+.+.+++++++|.||++||++|+.+.|.|.++++.+.+ ++.++.+|++.+.. .+++|.++||+
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 82 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS--SAVFGRINIATNPWTAEKYGVQGTPTF 82 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TSEEEEEETTTCHHHHHHHTCCEESEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC--ceEEEEEECCcCHhHHHHCCCCcCCEE
Confidence 345999999999987877899999999999999999999999999999964 69999999998775 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|++|+. ..++.|..+.+.|.+||++..
T Consensus 83 ~~~~~G~~-~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 83 KFFCHGRP-VWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp EEEETTEE-EEEEESSCCHHHHHHHHHHHH
T ss_pred EEEeCCcE-EEEEcCCCCHHHHHHHHHHHh
Confidence 99987754 778999999999999999764
No 41
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.76 E-value=3.2e-18 Score=137.77 Aligned_cols=108 Identities=12% Similarity=0.206 Sum_probs=92.0
Q ss_pred CCcEEecccChhHHHhc-CCCcEEEEEEC-------CCChhhhhHHHHHHHHHHHhCCC---CceEEEEEeCCcccc--c
Q psy7938 172 NAVKVLVASNFDEIAFD-KSKHVLVEFYA-------PWCGHCKQLAPIYDKLGEKFADR---DDITIAKIDATVNEL--E 238 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~-~~~~~lv~f~~-------~~C~~C~~~~~~~~~la~~~~~~---~~v~~~~id~~~~~~--~ 238 (305)
+.|..|++++|++++.. .+.+++|+||| +||++|+.+.|.|+++|+.+... +++.|++||++.+.. .
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~ 97 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVK 97 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHH
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHH
Confidence 34999999999998853 35689999999 49999999999999999998521 579999999999886 8
Q ss_pred cCCcccccEEEEEeCCCceE-----------Eee---eC-CCCHHHHHHHHHhcCC
Q psy7938 239 HTKITSFPTLKLYAKDDNRV-----------IDY---NG-ERVLEALSNFVESGGK 279 (305)
Q Consensus 239 ~~~i~~~Ptl~~f~~g~~~~-----------~~~---~g-~~~~~~l~~fi~~~~~ 279 (305)
+|+|+++||+++|++|+... ..| .| .++.+.|.+||.+..+
T Consensus 98 ~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 98 DLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp HTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 99999999999999986533 455 35 8899999999998765
No 42
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.76 E-value=5.2e-18 Score=128.58 Aligned_cols=105 Identities=23% Similarity=0.428 Sum_probs=92.7
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
....+..++.++|.+.+.+++++++|.||++||++|+.+.|.+.++++.+.+ ++.++.+|++.+.. ++++|.++||
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 88 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG--KVVMAKVDIDDHTDLAIEYEVSAVPT 88 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--SSEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCCCCHHHHHHcCCCcccE
Confidence 3445899999999998877889999999999999999999999999999853 69999999998764 8899999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+++|++|+ ...++.|..+.+.|.+||++.
T Consensus 89 ~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 89 VLAMKNGD-VVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp EEEEETTE-EEEEEESCCCHHHHHHHHHHH
T ss_pred EEEEeCCc-EEEEEcCCCCHHHHHHHHHHH
Confidence 99997654 377899999999999999864
No 43
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.75 E-value=1e-17 Score=124.24 Aligned_cols=103 Identities=26% Similarity=0.481 Sum_probs=91.4
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.|..++.++|++.+. ++++++|.||++||++|+.+.|.+.++++.+++ ++.++.+|++.+.. ..++|.++||++
T Consensus 4 ~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 80 (109)
T 3tco_A 4 DVTLVLTEENFDEVIR-NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKG--KAVFGRLNVDENQKIADKYSVLNIPTTL 80 (109)
T ss_dssp CCCEECCTTTHHHHHH-HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeEEEecHHHHHHHHh-cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCC--CceEEEEccccCHHHHHhcCcccCCEEE
Confidence 4588999999999884 489999999999999999999999999999953 69999999988765 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|+. ..++.|..+.+.|.+||++..
T Consensus 81 ~~~~g~~-~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 81 IFVNGQL-VDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EEETTEE-EEEEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcE-EEeeeccCCHHHHHHHHHHHh
Confidence 9966644 788999999999999998754
No 44
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.75 E-value=7.6e-18 Score=124.81 Aligned_cols=102 Identities=24% Similarity=0.494 Sum_probs=90.9
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+.+++++++|.||++||++|+.+.|.+++++..+++ ++.++.+|++.+.. +.++|.++||+++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKD--KLKCVKLNTDESPNVASEYGIRSIPTIMVF 80 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHHTCCSSCEEEEE
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCC--ceEEEEEECCCCHHHHHHCCCCcCCEEEEE
Confidence 788999999998877889999999999999999999999999999953 69999999988764 88999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|+. ..++.|..+.+.|.++|++..
T Consensus 81 ~~G~~-~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 81 KGGKK-CETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SSSSE-EEEEESCCCHHHHHHHHHHHC
T ss_pred eCCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 76654 778999999999999998753
No 45
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.75 E-value=6.9e-18 Score=132.89 Aligned_cols=104 Identities=23% Similarity=0.515 Sum_probs=93.8
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.+..++.++|.+.+ ..+++++|+||++||++|+.+.|.|+++++.+. +++.++.+|++.+.. +.|+|.++||++
T Consensus 38 ~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~--~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 38 GEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA--GKVRFVKVNTEAEPALSTRFRIRSIPTIM 114 (148)
T ss_dssp CCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT--TTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC--CceEEEEEECcCCHHHHHHCCCCccCEEE
Confidence 459999999999988 778999999999999999999999999999995 469999999998875 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+|++|+. ..++.|..+.+.|.+||++...
T Consensus 115 ~~~~G~~-~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 115 LYRNGKM-IDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEETTEE-EEEESSCCCHHHHHHHHHHHHH
T ss_pred EEECCeE-EEEEeCCCCHHHHHHHHHHHhc
Confidence 9987644 7789999999999999998754
No 46
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.75 E-value=1.1e-17 Score=125.54 Aligned_cols=104 Identities=21% Similarity=0.493 Sum_probs=92.3
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.|..++.++|.+.+...+++++|.||++||++|+.+.|.+++++..+++ ++.++.+|++.+.. +.++|.++||+++
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSD--RLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTT--TCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCC--cEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 4899999999998877889999999999999999999999999999963 59999999998764 8999999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
|++| +...++.|..+.+.|.+||++...
T Consensus 86 ~~~G-~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 86 VKGE-QILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EETT-EEEEEEESCCCHHHHHHHHHHHHC
T ss_pred EcCC-EEEEEecCCCCHHHHHHHHHHHhc
Confidence 9665 437789999999999999987643
No 47
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.75 E-value=1.1e-17 Score=126.80 Aligned_cols=107 Identities=30% Similarity=0.515 Sum_probs=93.4
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
..+.+..++..+|.+.+.+++++++|.||++||++|+.+.|.+++++..+.+ ++.++.+|++.+.. +.++|.++||
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~i~~~Pt 87 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERAT--DLTVAKLDVDTNPETARNFQVVSIPT 87 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHHHHhcCCCcCCE
Confidence 3445999999999998877889999999999999999999999999999953 69999999998764 8899999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+++|++|+. ..++.|..+.+.|.+||++...
T Consensus 88 ~~~~~~g~~-~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 88 LILFKDGQP-VKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp EEEEETTEE-EEEEESCCCHHHHHHHTCSCCC
T ss_pred EEEEECCEE-EEEecCCCCHHHHHHHHHHHHh
Confidence 999986643 7789999999999999987653
No 48
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.75 E-value=4.3e-18 Score=128.51 Aligned_cols=109 Identities=37% Similarity=0.661 Sum_probs=94.6
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcccc--ccCCcccccE
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR-DDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
.+.|..++.++|.+.+. .+++++|.||++||++|+.+.|.+.++++.++.. .++.++.+|++.+.. ++++|.++||
T Consensus 6 ~~~v~~l~~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEALA-AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHHH-HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHHc-cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 34589999999998774 5789999999999999999999999999998653 479999999988754 8899999999
Q ss_pred EEEEeCCCce-EEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 248 LKLYAKDDNR-VIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 248 l~~f~~g~~~-~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
+++|++|+.. ...+.|..+.+.|.+||++....
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 9999887651 38899999999999999987654
No 49
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.75 E-value=7.6e-18 Score=133.89 Aligned_cols=104 Identities=26% Similarity=0.521 Sum_probs=92.7
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.+..++..+|.+.+ ..+++++|+||++||++|+.+.|.|+++++.+.+ ++.|+.+|++.+.. .+|+|+++||++
T Consensus 47 ~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~--~v~~~~vd~~~~~~l~~~~~i~~~Pt~~ 123 (155)
T 2ppt_A 47 GKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAG--QVRLAKIDTQAHPAVAGRHRIQGIPAFI 123 (155)
T ss_dssp SSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTSTHHHHHTTCCSSSEEE
T ss_pred CCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccC--CEEEEEEeCCccHHHHHHcCCCcCCEEE
Confidence 458889999999988 6788999999999999999999999999999954 69999999998775 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+|++|+. ..++.|..+.+.|.+||++...
T Consensus 124 ~~~~G~~-~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 124 LFHKGRE-LARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EEETTEE-EEEEESCCCHHHHHHHHHHHHC
T ss_pred EEeCCeE-EEEecCCCCHHHHHHHHHHHhc
Confidence 9976644 7789999999999999998654
No 50
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.75 E-value=2.2e-17 Score=139.02 Aligned_cols=108 Identities=26% Similarity=0.513 Sum_probs=96.6
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
..+.+..++.++|++.+.+++++++|.||++||++|+.+.|.|+++++.+++ ++.++.+|++.+.. .+|+|.++||
T Consensus 10 ~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~--~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 10 MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp CSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC--CcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 3456999999999998878899999999999999999999999999999964 59999999998765 8999999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
+++|++|+. ..++.|..+.+.|.+||++....
T Consensus 88 ~~~~~~G~~-~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 88 LLLFKNGEV-AATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp EEEEETTEE-EEEEESCCCHHHHHHHHHHHSCC
T ss_pred EEEEECCeE-EEEeccccChHHHHHHHHhhccc
Confidence 999987644 77899999999999999998753
No 51
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=6e-18 Score=127.70 Aligned_cols=100 Identities=24% Similarity=0.490 Sum_probs=87.6
Q ss_pred CcEEecccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 173 AVKVLVASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
.....+.++|++.+.+ .+++++|.||++||++|+.+.|.|+++++.++ ++.++.+|++.+.. +.|+|.++||++
T Consensus 13 ~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 89 (116)
T 3qfa_C 13 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS---NVIFLEVDVDDCQDVASECEVKSMPTFQ 89 (116)
T ss_dssp CBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT---TSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCccccEEE
Confidence 3666778999998853 78999999999999999999999999999984 39999999998775 899999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.|. +.+.|.++|++.
T Consensus 90 ~~~~G~~-~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 90 FFKKGQK-VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EESSSSE-EEEEESC-CHHHHHHHHHHH
T ss_pred EEeCCeE-EEEEcCC-CHHHHHHHHHHh
Confidence 9976654 7889999 999999999864
No 52
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.74 E-value=1.7e-17 Score=122.29 Aligned_cols=101 Identities=26% Similarity=0.543 Sum_probs=90.0
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+..++++++|.||++||++|+.+.|.+++++..+++ ++.++.+|++.+.. .+++|.++||+++|
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 79 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSG--KIAVYKLNTDEAPGIATQYNIRSIPTVLFF 79 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcC--ceEEEEEcCcchHHHHHhCCCCcccEEEEE
Confidence 678899999998877789999999999999999999999999999954 59999999988764 88999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
++|.. ..++.|..+.+.|.++|++.
T Consensus 80 ~~g~~-~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 80 KNGER-KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp ETTEE-EEEEEECCCHHHHHHHHHHH
T ss_pred eCCeE-EEEEecCCCHHHHHHHHHhh
Confidence 86644 77899999999999999864
No 53
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.74 E-value=1.8e-17 Score=122.31 Aligned_cols=101 Identities=31% Similarity=0.527 Sum_probs=88.1
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+.. ..++|.++||+++|
T Consensus 2 v~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~--~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 78 (105)
T 1nsw_A 2 TMTLTDANFQQAI-QGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHAD--KVTVAKLNVDENPETTSQFGIMSIPTLILF 78 (105)
T ss_dssp CEEECTTTHHHHH-SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceeccHHhHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CcEEEEEECcCCHHHHHHcCCccccEEEEE
Confidence 6789999999554 6678999999999999999999999999999953 59999999988764 89999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|+ ...++.|..+.+.|.+||++..
T Consensus 79 ~~G~-~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 79 KGGR-PVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHTTTTT
T ss_pred eCCe-EEEEEecCCCHHHHHHHHHHHh
Confidence 7664 3778999999999999997653
No 54
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.74 E-value=7.4e-18 Score=124.71 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=76.7
Q ss_pred cccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCC
Q psy7938 178 VASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDD 255 (305)
Q Consensus 178 ~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~ 255 (305)
+.++|.+.+ +++++++|.||++||++|+.+.|.++++++.+ +++.++.+|++.+.. .+++|.++||+++|++|+
T Consensus 7 ~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~---~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~ 82 (105)
T 4euy_A 7 TIEELATYI-EEQQLVLLFIKTENCGVCDVMLRKVNYVLENY---NYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK 82 (105)
T ss_dssp ---CCSSST-TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC---TTEEEEEEEECCC---------CCCCEEEEEETTE
T ss_pred CHHHHHHHH-hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc---CCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe
Confidence 446777766 56899999999999999999999999999998 369999999998765 899999999999998664
Q ss_pred ceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 256 NRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 256 ~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
. ..++.|..+.+.|.++|++..
T Consensus 83 ~-~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 83 E-ILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp E-EEEEESSCCHHHHHHHHHTTC
T ss_pred E-EEEEeCCcCHHHHHHHHHHhh
Confidence 4 788999999999999998753
No 55
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=2e-17 Score=126.50 Aligned_cols=105 Identities=28% Similarity=0.514 Sum_probs=90.4
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
.+.|..++.++|++.+. +.++|.||++||++|+.+.|.|.++++.+.+ .++.++.+|++.+.. .+++|.++||+
T Consensus 6 ~~~v~~l~~~~f~~~~~---~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 6 SGNVRVITDENWRELLE---GDWMIEFYAPWCPACQNLQPEWESFAEWGED-LEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCSEEECCTTTHHHHTS---SEEEEEEECSSCHHHHHHHHHHHHHHHHHGG-GTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCccEEecHHHHHHHhC---CCEEEEEECCCCHHHHHHhHHHHHHHHHhcc-CCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 34599999999998762 3499999999999999999999999999853 369999999998774 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++|++| + +.++.|..+.+.|.+||++.....
T Consensus 82 ~~~~~G-~-~~~~~G~~~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 82 YHCKDG-E-FRRYQGPRTKKDFINFISDKEWKS 112 (126)
T ss_dssp EEEETT-E-EEECCSCCCHHHHHHHHHTCGGGG
T ss_pred EEEeCC-e-EEEeecCCCHHHHHHHHHHHhhcc
Confidence 999766 3 688999999999999999876433
No 56
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.73 E-value=2.5e-17 Score=122.09 Aligned_cols=103 Identities=25% Similarity=0.476 Sum_probs=90.3
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.|..++.++|.+.+ +.+++++|.||++||++|+.+.|.++++++.+.+ ++.++.+|++.+.. +.+++.++||+++
T Consensus 2 ~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 78 (109)
T 2yzu_A 2 KPIEVTDQNFDETL-GQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEG--KLLVAKLDVDENPKTAMRYRVMSIPTVIL 78 (109)
T ss_dssp CCEECCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred cceEccHhHHHHHh-cCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhC--ceEEEEEECCCCHhHHHhCCCCcCCEEEE
Confidence 37889999999665 5678999999999999999999999999999963 69999999998774 8999999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
|++|+. ...+.|..+.+.|.+||++...
T Consensus 79 ~~~g~~-~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 79 FKDGQP-VEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp EETTEE-EEEEESCCCHHHHHHHHHTTC-
T ss_pred EeCCcE-eeeEeCCCCHHHHHHHHHHHhh
Confidence 976643 6789999999999999998764
No 57
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.73 E-value=6.5e-18 Score=128.35 Aligned_cols=104 Identities=25% Similarity=0.524 Sum_probs=91.7
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
.|..++.++|.+.+..++++++|.||++||++|+.+.|.|+++++.+.+ ++.++.+|++.+.. .+++|.++||+++
T Consensus 4 ~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG--KVRAGKVDCQAYPQTCQKAGIKAYPSVKL 81 (122)
T ss_dssp CSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT--TCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred chhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC--CeEEEEEeCcCCHHHHHHcCCCccceEEE
Confidence 3889999999887777889999999999999999999999999999964 79999999998774 8899999999999
Q ss_pred EeCCCceEEeeeCC----CCHHHHHHHHHhcCC
Q psy7938 251 YAKDDNRVIDYNGE----RVLEALSNFVESGGK 279 (305)
Q Consensus 251 f~~g~~~~~~~~g~----~~~~~l~~fi~~~~~ 279 (305)
|++|+. ..++.|. .+.+.|.+||.+...
T Consensus 82 ~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EeCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 988776 5666665 899999999998754
No 58
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=3.6e-17 Score=122.15 Aligned_cols=102 Identities=25% Similarity=0.503 Sum_probs=87.4
Q ss_pred cCCcEEecccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC-cccc--ccCCccccc
Q psy7938 171 KNAVKVLVASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT-VNEL--EHTKITSFP 246 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~-~~~~--~~~~i~~~P 246 (305)
.+.|..++.++|.+.+.+ .+++++|.||++||++|+.+.|.+.+++..++ ++.++.+|++ .+.. +.++|.++|
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~~~~~~~~v~~~P 80 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 80 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSBSS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC---CeEEEEEecCcchHHHHHHcCCCeee
Confidence 456999999999998864 67899999999999999999999999999985 4899999998 3332 889999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++++++|+. ..++.|.. .+.|.++|++.
T Consensus 81 t~~~~~~G~~-~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 81 TFKILKENSV-VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp EEEEESSSSE-EEEEESSC-HHHHHHHHHHH
T ss_pred EEEEEeCCcE-EEEEcCCC-HHHHHHHHHHh
Confidence 9988877754 67788874 88999999864
No 59
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.73 E-value=9.7e-18 Score=127.97 Aligned_cols=103 Identities=27% Similarity=0.543 Sum_probs=86.8
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCCh--------------hhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCG--------------HCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL- 237 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~--------------~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~- 237 (305)
.|..++.++|.+.+.+++++++|.||++||+ +|+.+.|.++++++.+++ ++.++.+|++.+..
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~--~~~~~~vd~d~~~~l 81 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQG--KLTVAKLNIDQNPGT 81 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC---------CEEEEEETTSCTTT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcC--CeEEEEEECCCCHHH
Confidence 4889999999988878899999999999999 999999999999998853 69999999998774
Q ss_pred -ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 238 -EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 238 -~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
.+|+|+++||+++|++|.. ..++.|..+.+.|.+||++..
T Consensus 82 ~~~~~v~~~Pt~~~~~~G~~-~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 82 APKYGIRGIPTLLLFKNGEV-AATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGGTCCBSSEEEEEESSSE-EEEEESCCCHHHHHHHHTTTC
T ss_pred HHHcCCCccCEEEEEECCEE-EEEEeCCCCHHHHHHHHHHHh
Confidence 8999999999999976654 778999999999999998753
No 60
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.73 E-value=2.3e-17 Score=121.13 Aligned_cols=100 Identities=25% Similarity=0.452 Sum_probs=88.3
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+ ..+++++|.||++||++|+.+.|.++++++.+++ +.++.+|++.+.. +.+++.++||+++|
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 76 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ---VGFGKLNSDENPDIAARYGVMSLPTVIFF 76 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSSCEEEEE
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---ceEEEEECCCCHHHHHhCCccccCEEEEE
Confidence 4678899999988 5688999999999999999999999999999853 9999999998764 88999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|+. ..++.|..+.+.|.+||++..
T Consensus 77 ~~g~~-~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 77 KDGEP-VDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp ETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred ECCeE-hhhccCCCCHHHHHHHHHHHh
Confidence 76643 778999999999999998754
No 61
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.3e-17 Score=143.93 Aligned_cols=110 Identities=27% Similarity=0.576 Sum_probs=95.4
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--cc--cccCCcccc
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--NE--LEHTKITSF 245 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--~~--~~~~~i~~~ 245 (305)
..+.|..|+.++|++.+.+.+++++|.|||+||++|+.+.|.|++++..+.+ .+.++.+|++. +. +..++|.++
T Consensus 15 ~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~--~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 15 SDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDG--VVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp SCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccC--CcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3445999999999999977788999999999999999999999999999964 57888888873 33 289999999
Q ss_pred cEEEEEeCCC----------------ceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 246 PTLKLYAKDD----------------NRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 246 Ptl~~f~~g~----------------~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
||+++|++|+ ..+..|.|.++.+.|.+|+.+.....
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~ 144 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSY 144 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCC
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccc
Confidence 9999999886 13789999999999999999987544
No 62
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.72 E-value=3.9e-17 Score=121.13 Aligned_cols=99 Identities=19% Similarity=0.399 Sum_probs=84.2
Q ss_pred cEEe-cccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVL-VASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l-~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+..+ +.++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+ +++.++.+|++.+.. +.++|.++||++
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 79 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY---PQAVFLEVDVHQCQGTAATNNISATPTFQ 79 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC---TTSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC---CCcEEEEEECccCHHHHHhcCCCcccEEE
Confidence 5566 56899998853 7889999999999999999999999999998 369999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.|.. .+.|.+||++.
T Consensus 80 ~~~~G~~-~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 80 FFRNKVR-IDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp EEETTEE-EEEEESSC-HHHHHHHHHHH
T ss_pred EEECCeE-EEEEeCCC-HHHHHHHHHHh
Confidence 9987744 77888954 45699999875
No 63
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.72 E-value=4.6e-17 Score=121.37 Aligned_cols=98 Identities=29% Similarity=0.578 Sum_probs=84.7
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
....+..+|++.+ ..+++++|.||++||++|+.+.|.++++++.++ ++.++.+|++.+.. ..++|.++||+++|
T Consensus 9 ~~~~~~~~f~~~~-~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~---~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 9 TQFKTASEFDSAI-AQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP---QADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp EECCSHHHHHHHT-TSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cCCCCHHHHHHHH-hcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 4555678898877 458999999999999999999999999999984 48999999988765 89999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
++|+. ..++.|. +.+.|.++|++.
T Consensus 85 ~~G~~-~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKE-VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETTEE-EEEEESS-CHHHHHHHHHHH
T ss_pred ECCEE-EEEEeCC-CHHHHHHHHHhh
Confidence 96543 7888998 779999999875
No 64
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.72 E-value=6.6e-17 Score=123.68 Aligned_cols=100 Identities=21% Similarity=0.329 Sum_probs=88.3
Q ss_pred CcEEecc-cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 173 AVKVLVA-SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 173 ~v~~l~~-~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
.|..|++ ++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+. ++.++.+|++.+.. ..++|.++||++
T Consensus 20 mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 20 SVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP---TVKFAKVDADNNSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp CCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC---CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 3889998 9999988 678999999999999999999999999999983 69999999998774 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|.. ...+.| .+.+.|.+||.+..
T Consensus 96 i~~~G~~-~~~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 96 IARSGKM-LGHVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp EEETTEE-EEEEES-SCHHHHHHHHHHHH
T ss_pred EEeCCeE-EEEEeC-CCHHHHHHHHHHHh
Confidence 9977644 778899 68899999998754
No 65
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.71 E-value=8.2e-17 Score=118.79 Aligned_cols=100 Identities=26% Similarity=0.527 Sum_probs=87.0
Q ss_pred cEEecc-cChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVLVA-SNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l~~-~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
|..+++ ++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.++ +++.++.+|++.+.. +.+++.++||++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 79 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFA--DNVVVLKVDVDECEDIAMEYNISSMPTFV 79 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT--TTEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhC--CCeEEEEEeccchHHHHHHcCCCcccEEE
Confidence 566777 889888854 78899999999999999999999999999985 479999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.| .+.+.|.+||++.
T Consensus 80 ~~~~G~~-~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 80 FLKNGVK-VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp EEETTEE-EEEEES-CCHHHHHHHHHHT
T ss_pred EEcCCcE-EEEEcC-CCHHHHHHHHHHh
Confidence 9987644 778899 6889999999864
No 66
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=4.7e-17 Score=142.13 Aligned_cols=104 Identities=21% Similarity=0.426 Sum_probs=92.8
Q ss_pred CCcEEecccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 172 NAVKVLVASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
+.|..++.++|++.+.. .+++++|+||++||++|+.+.|.|+++++.+++ ++.|+.||++.+.. ..|+|.++||+
T Consensus 7 ~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 7 ENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNG--QFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp TTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTS--SSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCC--CeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 45999999999997753 378999999999999999999999999999963 69999999998765 89999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|++|+. +.++.|..+.+.+.+||....
T Consensus 85 ~~~~~G~~-~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQP-VDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTEE-EEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECCEE-EEEeeCCCCHHHHHHHHHHHc
Confidence 99987643 778999999999999999876
No 67
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.71 E-value=6.6e-17 Score=123.56 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=83.3
Q ss_pred hcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEe--CCcccc--ccCCcccccEEEEEeCCCceEEeee
Q psy7938 187 FDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKID--ATVNEL--EHTKITSFPTLKLYAKDDNRVIDYN 262 (305)
Q Consensus 187 ~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id--~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~ 262 (305)
...+++++|.||++||++|+.+.|.+.++++.++ .++.++.+| ++.+.. ..++|.++||+++|+++++...++.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~--~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~ 100 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE--GKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQ 100 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS--SSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEE
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc--CCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEec
Confidence 3567899999999999999999999999999996 479999999 877654 8899999999999996555577899
Q ss_pred CCCCHHHHHHHHHhcCCCCCCC
Q psy7938 263 GERVLEALSNFVESGGKEGGLP 284 (305)
Q Consensus 263 g~~~~~~l~~fi~~~~~~~~~~ 284 (305)
|..+.+.|.+||++.....+..
T Consensus 101 G~~~~~~l~~~l~~~~~~~~~~ 122 (126)
T 2l57_A 101 GLMRKNNIETILNSLGVKEGHH 122 (126)
T ss_dssp SCCCHHHHHHHHHHHCCCCCCC
T ss_pred CCCCHHHHHHHHHHHhcccccc
Confidence 9999999999999987665543
No 68
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.71 E-value=9.3e-17 Score=136.38 Aligned_cols=109 Identities=39% Similarity=0.761 Sum_probs=95.5
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcccc--ccCCccccc
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR-DDITIAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~~~--~~~~i~~~P 246 (305)
..+.|..+++++|++.+ ..+++++|+||++||++|+.+.|.|.++++.+++. .++.++.+|++.+.. ++|+|+++|
T Consensus 13 ~~~~v~~l~~~~~~~~~-~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (241)
T 3idv_A 13 EENGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYP 91 (241)
T ss_dssp EETTEEEECTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCCcEEecccCHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCC
Confidence 45669999999999987 56789999999999999999999999999999642 359999999998765 899999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
|+++|++|+ .+.|.|.++.+.|.+|+.+.....
T Consensus 92 t~~~~~~g~--~~~~~g~~~~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 92 TIKILKKGQ--AVDYEGSRTQEEIVAKVREVSQPD 124 (241)
T ss_dssp EEEEEETTE--EEECCSCSCHHHHHHHHHHHHSTT
T ss_pred EEEEEcCCC--cccccCcccHHHHHHHHhhccCcc
Confidence 999998774 457999999999999999876543
No 69
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=149.42 Aligned_cols=108 Identities=26% Similarity=0.586 Sum_probs=92.1
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC----CCceEEEEEeCCcccc--ccCCccccc
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD----RDDITIAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~----~~~v~~~~id~~~~~~--~~~~i~~~P 246 (305)
.|..|++++|++.+ ..+++++|.|||+||++|+.+.|.|+++|..++. .+++.+++|||+.+.. .+++|+++|
T Consensus 6 ~v~~l~~~~f~~~~-~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~P 84 (382)
T 2r2j_A 6 EITSLDTENIDEIL-NNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYP 84 (382)
T ss_dssp --CBCCTTTHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEES
T ss_pred ceEECCHHHHHHHH-hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCC
Confidence 48899999999976 4578999999999999999999999999999953 3469999999998764 899999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
|+++|++|......|.|.++.+.|.+||.+....+
T Consensus 85 t~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~ 119 (382)
T 2r2j_A 85 TLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDP 119 (382)
T ss_dssp EEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCC
T ss_pred EEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCC
Confidence 99999988542336999999999999999987543
No 70
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.71 E-value=7.3e-17 Score=122.47 Aligned_cols=101 Identities=24% Similarity=0.430 Sum_probs=88.5
Q ss_pred CcEEecccChhHHHhc---CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 173 AVKVLVASNFDEIAFD---KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~---~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
.+..++.++|.+.+.. .+++++|.||++||++|+.+.|.|+++++.+. ++.++.+|++.+.. ++++|.++||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt 90 (122)
T 2vlu_A 14 VISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP---NAVFLKVDVDELKPIAEQFSVEAMPT 90 (122)
T ss_dssp CEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred ceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHcCCCcccE
Confidence 3667788999998865 68999999999999999999999999999985 39999999998764 8999999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+++|++|+. ..++.|.. .+.|.+||++..
T Consensus 91 ~~~~~~G~~-~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 91 FLFMKEGDV-KDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp EEEEETTEE-EEEEESSC-HHHHHHHHHHHH
T ss_pred EEEEeCCEE-EEEEeCcC-HHHHHHHHHHHh
Confidence 999976644 77899988 999999998764
No 71
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.70 E-value=5.5e-16 Score=139.78 Aligned_cols=162 Identities=14% Similarity=0.174 Sum_probs=129.0
Q ss_pred HhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCc-CceeccCCCCCCCHHHHHHHHHHHHcCcccccccC
Q psy7938 84 FLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEE-DMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLS 162 (305)
Q Consensus 84 ~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~-~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s 162 (305)
+... ..+.|+.++. ..+|..+|++ . |++++|+.-+ ....| .|.++.++|.+|+....
T Consensus 58 A~~~-~~~~F~~t~~-----~~v~~~~~v~--~-~~i~lfk~f~~~~~~~---~g~~~~~~i~~fi~~~~---------- 115 (361)
T 3uem_A 58 AEAI-DDIPFGITSN-----SDVFSKYQLD--K-DGVVLFKKFDEGRNNF---EGEVTKENLLDFIKHNQ---------- 115 (361)
T ss_dssp HHHC-SSSCEEEECC-----HHHHHHTTCS--S-SEEEEEESSTTSEEEC---CSCCCHHHHHHHHHHHS----------
T ss_pred HhcC-CCceEEEECc-----HHHHHHhCCC--C-CeEEEEEecCCCcccc---CCcCCHHHHHHHHHHcC----------
Confidence 3444 4577775542 5789999996 4 9999998633 22344 37789999999999983
Q ss_pred CCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC--cccc--c
Q psy7938 163 QPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT--VNEL--E 238 (305)
Q Consensus 163 ~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~--~~~~--~ 238 (305)
.+.|.+++.+++.++.....+.++|.||++||++|+.+.+.|+++|+.+++ ++.|+.+|++ .+.. +
T Consensus 116 --------~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~--~i~f~~vd~~~~~~~~~~~ 185 (361)
T 3uem_A 116 --------LPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKG--KILFIFIDSDHTDNQRILE 185 (361)
T ss_dssp --------SCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTT--TCEEEEECTTSGGGHHHHH
T ss_pred --------CCcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccC--ceEEEEecCChHHHHHHHH
Confidence 234899999999998866667889999999999999999999999999964 6999999998 3332 8
Q ss_pred cCCccc--ccEEEEEeCCCceEEeee---CCCCHHHHHHHHHhcC
Q psy7938 239 HTKITS--FPTLKLYAKDDNRVIDYN---GERVLEALSNFVESGG 278 (305)
Q Consensus 239 ~~~i~~--~Ptl~~f~~g~~~~~~~~---g~~~~~~l~~fi~~~~ 278 (305)
.|+|++ +|++++|..++. ...|. |..+.+.|.+|+.+..
T Consensus 186 ~fgi~~~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 186 FFGLKKEECPAVRLITLEEE-MTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp HTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred HcCCCccCCccEEEEEcCCc-ccccCCCccccCHHHHHHHHHHHh
Confidence 899987 999999998654 45565 7899999999999864
No 72
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.70 E-value=7e-19 Score=136.24 Aligned_cols=109 Identities=18% Similarity=0.314 Sum_probs=90.6
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
++..+++++|||+ |++|+.++|.+.++ +.++++++.|++||.+ ++++++++|
T Consensus 21 ~~~~pv~v~f~a~-~~~c~~~~p~l~~~-------------------------A~~~~gk~~f~~vd~d--~~~~~a~~~ 72 (133)
T 2djk_A 21 SAGIPLAYIFAET-AEERKELSDKLKPI-------------------------AEAQRGVINFGTIDAK--AFGAHAGNL 72 (133)
T ss_dssp HTTSCEEEEECSC-SSSHHHHHHHHHHH-------------------------HHSSTTTSEEEEECTT--TTGGGTTTT
T ss_pred cCCCCEEEEEecC-hhhHHHHHHHHHHH-------------------------HHHhCCeEEEEEEchH--HhHHHHHHc
Confidence 3445678899999 89999888888888 5666789999999999 888999999
Q ss_pred CCCCCCCCeEEEEecCcCceeccCC-CCCCCHHHHHHHHHHHHcCcccccccCCCCCCc
Q psy7938 111 GMSKDEVPSLRLIRLEEDMAKYKPA-TPEISVDTVRSFVTEFLAGNLKQHLLSQPLPED 168 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~~~~~~~~-~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~ 168 (305)
||+...+||+++|+.++. .+|... .|..+.+.|.+|+.+++.|+++++++|+++|+.
T Consensus 73 gi~~~~iPtl~i~~~~~g-~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~~kSe~iP~~ 130 (133)
T 2djk_A 73 NLKTDKFPAFAIQEVAKN-QKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKSEPIPEK 130 (133)
T ss_dssp TCCSSSSSEEEEECTTTC-CBCCCCSSSCCCHHHHHHHHHHHHHTCCCCSSCCCCCCTT
T ss_pred CCCcccCCEEEEEecCcC-cccCCCCccccCHHHHHHHHHHHHcCCcCccccCCCCCCc
Confidence 998223999999996221 345432 278899999999999999999999999999986
No 73
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.70 E-value=1.4e-16 Score=121.35 Aligned_cols=103 Identities=26% Similarity=0.531 Sum_probs=87.8
Q ss_pred cCCcEEecccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC-cccc--ccCCccccc
Q psy7938 171 KNAVKVLVASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT-VNEL--EHTKITSFP 246 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~-~~~~--~~~~i~~~P 246 (305)
.+.+..++.++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.++ ++.++.+|++ .+.. ++++|+++|
T Consensus 17 ~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~~~~~~vd~~~~~~~~~~~~~v~~~P 93 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL---DVIFLKLDCNQENKTLAKELGIRVVP 93 (124)
T ss_dssp TTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSTTHHHHHHHCCSSSS
T ss_pred CCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC---CCEEEEEecCcchHHHHHHcCCCeee
Confidence 345899999999998854 67899999999999999999999999999985 5899999997 3332 789999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
|+++|++|+. ..++.|.. .+.|.++|++..
T Consensus 94 t~~~~~~G~~-~~~~~G~~-~~~l~~~i~~~~ 123 (124)
T 1faa_A 94 TFKILKENSV-VGEVTGAK-YDKLLEAIQAAR 123 (124)
T ss_dssp EEEEEETTEE-EEEEESSC-HHHHHHHHHHHT
T ss_pred EEEEEeCCcE-EEEEcCCC-HHHHHHHHHHhh
Confidence 9999987744 67788876 899999998753
No 74
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.70 E-value=7.3e-17 Score=120.46 Aligned_cols=102 Identities=28% Similarity=0.566 Sum_probs=87.6
Q ss_pred CcEEe-cccChhHHHhc-C--CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCccccc
Q psy7938 173 AVKVL-VASNFDEIAFD-K--SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 173 ~v~~l-~~~~f~~~v~~-~--~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~P 246 (305)
.|..+ +.++|.+.+.. . +++++|.||++||++|+.+.|.|++++..+.+ ++.++.+|++.+.. +.++|.++|
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~P 80 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAG--KVIFLKVDVDAVAAVAEAAGITAMP 80 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT--TSEEEEEETTTTHHHHHHHTCCBSS
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC--CeEEEEEECCchHHHHHHcCCCccc
Confidence 47778 45889988853 3 78999999999999999999999999999953 79999999988764 889999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
|+++|++|.. ..++.|. +.+.|.+||++..
T Consensus 81 t~~~~~~G~~-~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 81 TFHVYKDGVK-ADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEEEETTEE-EEEEESC-CHHHHHHHHHHHH
T ss_pred EEEEEECCeE-EEEEcCC-CHHHHHHHHHHHh
Confidence 9999987644 7788998 9999999998754
No 75
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.1e-17 Score=120.33 Aligned_cols=101 Identities=18% Similarity=0.361 Sum_probs=83.1
Q ss_pred cEEecc-cChhHHHh--cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 174 VKVLVA-SNFDEIAF--DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 174 v~~l~~-~~f~~~v~--~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
|..+++ ++|.+.+. ..+++++|.||++||++|+.+.|.+++++..+.. .++.++.+|++.+.. ..++|.++||+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 80 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSN-SNVSFLSIDADENSEISELFEISAVPYF 80 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGG-TTSEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCC-CCEEEEEEecccCHHHHHHcCCCcccEE
Confidence 677887 89999885 3478999999999999999999999999998642 369999999998774 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
++|++|+. ..++.|.. .+.|.++|++.
T Consensus 81 ~~~~~G~~-~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 81 IIIHKGTI-LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp EEEETTEE-EEEECSCC-HHHHHHHHHHH
T ss_pred EEEECCEE-EEEecCCC-HHHHHHHHHHH
Confidence 99976643 77888874 55699999865
No 76
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.70 E-value=7.6e-17 Score=125.65 Aligned_cols=103 Identities=23% Similarity=0.431 Sum_probs=77.4
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+.+..++.++|.+.+...++ ++|.||++||++|+.+.|.|++++..+.+ ++.|+.+|++.+.. ..|+|.++||++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 109 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAG--RLKVVKVNVDEHPGLAARYGVRSVPTLV 109 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTT--TEEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCCCHHHHHHCCCCccCEEE
Confidence 45888999999998876666 99999999999999999999999999953 69999999998765 799999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|.. ...+.|..+.+.|.+||.+..
T Consensus 110 ~~~~G~~-~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 110 LFRRGAP-VATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp EEETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcE-EEEEeCCCCHHHHHHHHHHHH
Confidence 9986643 778999999999999998764
No 77
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.70 E-value=9.7e-17 Score=120.99 Aligned_cols=98 Identities=28% Similarity=0.567 Sum_probs=85.8
Q ss_pred cEEecc-cChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVLVA-SNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l~~-~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+..+++ ++|.+.+.+ .+++++|.||++||++|+.+.|.++++++.+ ++.++.+|++.+.. ++++|.++||++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~----~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 90 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY----DAIFVKVDVDKLEETARKYNISAMPTFI 90 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS----SSEEEEEETTTSHHHHHHTTCCSSSEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc----CcEEEEEECCccHHHHHHcCCCccceEE
Confidence 788887 899998854 6889999999999999999999999999887 68999999988764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.| .+.+.|.++|++.
T Consensus 91 ~~~~G~~-~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 91 AIKNGEK-VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp EEETTEE-EEEEES-SCHHHHHHHHHHH
T ss_pred EEeCCcE-EEEEeC-CCHHHHHHHHHHh
Confidence 9987644 778889 6889999999864
No 78
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.70 E-value=1.6e-16 Score=116.73 Aligned_cols=99 Identities=24% Similarity=0.581 Sum_probs=84.8
Q ss_pred cEEecc-cChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVLVA-SNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l~~-~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
|+.+++ ++|++.+.+ .+++++|.||++||++|+.+.|.+.+++..++ ++.++.+|++.+.. +.+++.++||++
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~Pt~~ 77 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP---EVEFAKVDVDQNEEAAAKYSVTAMPTFV 77 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC---CCEEEEEeccCCHHHHHHcCCccccEEE
Confidence 345655 888888754 67899999999999999999999999999984 69999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|++|+. ..++.| .+.+.|.+||++.
T Consensus 78 ~~~~g~~-~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 78 FIKDGKE-VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp EEETTEE-EEEEES-SCHHHHHHHHHHH
T ss_pred EEeCCcE-EEEEeC-CCHHHHHHHHHhh
Confidence 9986644 778889 6899999999864
No 79
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.69 E-value=2.1e-16 Score=120.66 Aligned_cols=104 Identities=20% Similarity=0.400 Sum_probs=88.8
Q ss_pred ccCCcEEe-cccChhHHHhc---CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcc
Q psy7938 170 DKNAVKVL-VASNFDEIAFD---KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKIT 243 (305)
Q Consensus 170 ~~~~v~~l-~~~~f~~~v~~---~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~ 243 (305)
+.+.|..+ +.++|++.+.. .+++++|.||++||++|+.+.|.|+++++.+. ++.++.+|++.+.. +.|+|.
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~vd~d~~~~l~~~~~v~ 90 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP---NVLFLKVDTDELKSVASDWAIQ 90 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTSHHHHHHTTCC
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CcEEEEEECccCHHHHHHcCCC
Confidence 44568888 66889988854 58899999999999999999999999999984 69999999998764 889999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++||+++|++|.. ..++.| .+.+.|.++|++..
T Consensus 91 ~~Pt~~~~~~G~~-~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 91 AMPTFMFLKEGKI-LDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SSSEEEEEETTEE-EEEEES-CCHHHHHHHHHHHC
T ss_pred ccCEEEEEECCEE-EEEEeC-CCHHHHHHHHHHhc
Confidence 9999999976644 677888 48999999998753
No 80
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.69 E-value=4.1e-17 Score=125.19 Aligned_cols=89 Identities=21% Similarity=0.360 Sum_probs=79.3
Q ss_pred HhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeC
Q psy7938 186 AFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNG 263 (305)
Q Consensus 186 v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g 263 (305)
+...+++++|.||++||++|+.+.|.++++++.++ +++.++.+|++.+.. ++++|.++||+++|++|+. ..++.|
T Consensus 38 ~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~-~~~~~G 114 (128)
T 3ul3_B 38 VNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG--KRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTM-LARKDH 114 (128)
T ss_dssp TTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG--GGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEE-EEEESS
T ss_pred HHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEE-EEEecC
Confidence 44578999999999999999999999999999995 479999999998765 8899999999999976644 788999
Q ss_pred CCCHHHHHHHHHhc
Q psy7938 264 ERVLEALSNFVESG 277 (305)
Q Consensus 264 ~~~~~~l~~fi~~~ 277 (305)
..+.+.|.+||+++
T Consensus 115 ~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 115 FVSSNDLIALIKKH 128 (128)
T ss_dssp CCCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHhC
Confidence 99999999999763
No 81
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.69 E-value=1.9e-18 Score=132.54 Aligned_cols=113 Identities=16% Similarity=0.180 Sum_probs=89.0
Q ss_pred EeeccCceecCCCCCCCCh-hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCce
Q psy7938 12 IRLEEDMAKYKPATPEINV-DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLK 90 (305)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (305)
+.....+..++.++|+..+ ++.+.+++.|||+||+||+.+.|.|.+++..+.. ....+.
T Consensus 11 ~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~--------------------~~~~~~ 70 (127)
T 3h79_A 11 GERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQ--------------------KRNHLT 70 (127)
T ss_dssp --CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHT--------------------STTTTT
T ss_pred cCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHh--------------------cccCCC
Confidence 3345678888777777544 3467899999999999999999988888554421 223467
Q ss_pred EEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCc--eeccCCCCCCCHHHHHHHHHHH
Q psy7938 91 VLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDM--AKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 91 v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~--~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+.|+.|||+ ++.++|++|+|. ++||+++|+.|+.. ..| .|.++.++|.+|+.+.
T Consensus 71 v~~~~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~~~~~~~~---~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 71 FVAARIDGE--KYPDVIERMRVS--GFPTMRYYTRIDKQEPFEY---SGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEEEEETT--TCHHHHHHTTCC--SSSEEEEECSSCSSSCEEC---CSCCCHHHHHHHHHHH
T ss_pred eEEEEEEcc--ccHhHHHhcCCc--cCCEEEEEeCCCCCCceEe---cCCccHHHHHHHHHhc
Confidence 999999999 889999999998 99999999988653 244 3789999999999874
No 82
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.69 E-value=7.2e-17 Score=127.33 Aligned_cols=98 Identities=14% Similarity=0.196 Sum_probs=85.9
Q ss_pred cccChhHHHh-cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCC
Q psy7938 178 VASNFDEIAF-DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 178 ~~~~f~~~v~-~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g 254 (305)
+.++|++.+. ..+++++|.|||+||++|+.+.|.++++++.+.+ .+.++.+|++.+.. ..++|.++||+++|++|
T Consensus 10 ~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~--~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G 87 (149)
T 3gix_A 10 SKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSK--MAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNG 87 (149)
T ss_dssp SHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTT--TEEEEEEETTTCCHHHHHTTCCSSSEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccC--ceEEEEEECCcCHHHHHHcCCCccCeEEEEECC
Confidence 5688998886 6789999999999999999999999999999853 59999999988775 89999999999999887
Q ss_pred CceE---------EeeeC-CCCHHHHHHHHHhcC
Q psy7938 255 DNRV---------IDYNG-ERVLEALSNFVESGG 278 (305)
Q Consensus 255 ~~~~---------~~~~g-~~~~~~l~~fi~~~~ 278 (305)
+. . .++.| ..+.+.|.++|++..
T Consensus 88 ~~-v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 88 QH-MKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp EE-EEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred eE-EEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 54 5 57899 899999999998763
No 83
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.69 E-value=1.7e-17 Score=139.01 Aligned_cols=129 Identities=14% Similarity=0.204 Sum_probs=101.2
Q ss_pred HHHHHHHHcCcccccccCCCCCCccccCCcEEe-cccChhHHHhcCC--CcEEEEEECCCChhhhhHHHHHHHHHHHhCC
Q psy7938 145 RSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVL-VASNFDEIAFDKS--KHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD 221 (305)
Q Consensus 145 ~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l-~~~~f~~~v~~~~--~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~ 221 (305)
.+|++++..+++.+..++.. +.. ..+.|..+ +..+|.+.+.+.+ ++++|.||++||++|+.+.|.|.+++..+.
T Consensus 74 ~~fl~~~r~~Rl~el~~~~~-~~~-~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~- 150 (217)
T 2trc_P 74 EGCLRKYRRQCMQDMHQKLS-FGP-RYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP- 150 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCC-CCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcc-CCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-
Confidence 45666666665544433322 222 45668998 8899999986543 899999999999999999999999999983
Q ss_pred CCceEEEEEeCCcccc-ccCCcccccEEEEEeCCCceEEeeeCCCCH-------HHHHHHHHhcCC
Q psy7938 222 RDDITIAKIDATVNEL-EHTKITSFPTLKLYAKDDNRVIDYNGERVL-------EALSNFVESGGK 279 (305)
Q Consensus 222 ~~~v~~~~id~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~-------~~l~~fi~~~~~ 279 (305)
.+.|++||++.... ..|+|.++||+++|++|.. +.++.|..+. +.|.+||.++.-
T Consensus 151 --~v~f~~vd~~~~~l~~~~~i~~~PTl~~~~~G~~-v~~~~G~~~~~g~~~~~~~Le~~L~~~g~ 213 (217)
T 2trc_P 151 --MVKFCKIRASNTGAGDRFSSDVLPTLLVYKGGEL-ISNFISVAEQFAEDFFAADVESFLNEYGL 213 (217)
T ss_dssp --TSEEEEEEHHHHTCSTTSCGGGCSEEEEEETTEE-EEEETTGGGGSCSSCCHHHHHHHHHTTTC
T ss_pred --CeEEEEEECCcHHHHHHCCCCCCCEEEEEECCEE-EEEEeCCcccCcccCCHHHHHHHHHHcCC
Confidence 79999999983233 7899999999999997644 7788997764 899999998754
No 84
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.69 E-value=1.3e-16 Score=119.33 Aligned_cols=101 Identities=31% Similarity=0.590 Sum_probs=88.5
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
+....++..+|++.+ +.+++++|.||++||++|+.+.|.++++++.+. ++.++.+|++.+.. ++++|.++||++
T Consensus 9 ~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~---~v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 9 MVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT---KMVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred eEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC---CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 347788899999988 468899999999999999999999999999984 59999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+|++|.. ..++.|. +.+.|.+||++..
T Consensus 85 ~~~~G~~-~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 85 VYKNGSS-VDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp EEETTEE-EEEEESC-CHHHHHHHHHTTC
T ss_pred EEECCcE-EEEEeCC-CHHHHHHHHHHhh
Confidence 9986644 7789998 9999999998753
No 85
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.69 E-value=9.8e-17 Score=145.12 Aligned_cols=113 Identities=17% Similarity=0.246 Sum_probs=94.9
Q ss_pred CCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHH------HHHHHHHHHhCCCCceEEEEEeCCcccc-
Q psy7938 165 LPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLA------PIYDKLGEKFADRDDITIAKIDATVNEL- 237 (305)
Q Consensus 165 ~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~------~~~~~la~~~~~~~~v~~~~id~~~~~~- 237 (305)
.|.....+.|..|+.++|++.+ ..++.++|.|||+||++|+... |.|+++|..+.+ .++.+++|||+.+..
T Consensus 6 ~p~~~~~~~v~~lt~~~f~~~i-~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~-~~v~~~~Vd~~~~~~l 83 (367)
T 3us3_A 6 FPEYDGVDRVINVNAKNYKNVF-KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLED-KGVGFGLVDSEKDAAV 83 (367)
T ss_dssp CCCCCCCCCCEECCTTTHHHHH-HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTT-TTEEEEEEETTTTHHH
T ss_pred CCCCCCCCccEECCHHHHHHHH-hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhc-CCceEEEEeCcccHHH
Confidence 3444344569999999999988 4578999999999999974443 689999999964 369999999998765
Q ss_pred -ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 238 -EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 238 -~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++++|+++||+++|++| .+..|.|.++.+.|.+||.++...+
T Consensus 84 ~~~~~V~~~PTl~~f~~G--~~~~y~G~~~~~~i~~~i~~~~~~~ 126 (367)
T 3us3_A 84 AKKLGLTEEDSIYVFKED--EVIEYDGEFSADTLVEFLLDVLEDP 126 (367)
T ss_dssp HHHHTCCSTTEEEEEETT--EEEECCSCCSHHHHHHHHHHHHSCS
T ss_pred HHHcCCCcCceEEEEECC--cEEEeCCCCCHHHHHHHHHHhcCCC
Confidence 89999999999999987 3579999999999999999986543
No 86
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.69 E-value=3.4e-16 Score=123.95 Aligned_cols=107 Identities=23% Similarity=0.464 Sum_probs=90.2
Q ss_pred CCcEEec-ccChhHHHhcC-CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccE
Q psy7938 172 NAVKVLV-ASNFDEIAFDK-SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPT 247 (305)
Q Consensus 172 ~~v~~l~-~~~f~~~v~~~-~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Pt 247 (305)
+.+..++ .++|.+.+.+. +++++|.||++||++|+.+.|.|+++++.+ +++.++.+|++.+.. ++|+|.++||
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL---PQVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC---TTSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred CCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc---CCeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 4488886 48898887543 789999999999999999999999999997 369999999998774 8899999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
+++|++| +...++.|. +.+.|.+||.+.......
T Consensus 89 ~~~~~~G-~~~~~~~G~-~~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 89 FLFFKNS-QKIDRLDGA-HAPELTKKVQRHASSGSF 122 (153)
T ss_dssp EEEEETT-EEEEEEESS-CHHHHHHHHHHHSCTTSS
T ss_pred EEEEECC-EEEEEEeCC-CHHHHHHHHHHHhccccC
Confidence 9999955 436678884 778899999998765544
No 87
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.69 E-value=1e-16 Score=120.58 Aligned_cols=98 Identities=23% Similarity=0.503 Sum_probs=82.1
Q ss_pred CcEEecc-cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 173 AVKVLVA-SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 173 ~v~~l~~-~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
.+..+++ +.|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+ +.++.+|++.+.. ++++|.++||++
T Consensus 13 ~~~~~~~~~~~~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~---v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 13 SITKLTNLTEFRNLI-KQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD---VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp GSCBCCSHHHHHHHH-HHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT---SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred heeecCCHHHHHHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 3666655 4455544 5688999999999999999999999999999853 9999999998764 889999999999
Q ss_pred EEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 250 LYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 250 ~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
+|++|+. ..++.|.. .+.|.++|++
T Consensus 89 ~~~~G~~-~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQL-IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTEE-EEEEESSC-HHHHHHHHHT
T ss_pred EEeCCeE-EEEEeCCC-HHHHHHHHHh
Confidence 9977644 77899988 9999999975
No 88
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.69 E-value=1.3e-16 Score=119.18 Aligned_cols=101 Identities=17% Similarity=0.288 Sum_probs=84.8
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
+..++.++| +.+ ..+++++|.||++||++|+.+.|.+++++..+. ++.++.+|++.+.. ++++|.++||+++|
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 79 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP---QVAISSVDSEARPELMKELGFERVPTLVFI 79 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT---TSCEEEEEGGGCHHHHHHTTCCSSCEEEEE
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC---CcEEEEEcCcCCHHHHHHcCCcccCEEEEE
Confidence 455678899 555 357899999999999999999999999998873 68899999887664 78999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
++|+. ..++.|..+.+.|.+++.+....
T Consensus 80 ~~G~~-v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 80 RDGKV-AKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp ESSSE-EEEEESCCCHHHHHHHHHTC---
T ss_pred ECCEE-EEEEcCCCCHHHHHHHHHHHhhh
Confidence 76654 78899999999999999987643
No 89
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.69 E-value=7.7e-17 Score=134.48 Aligned_cols=106 Identities=23% Similarity=0.514 Sum_probs=94.1
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
...+..+++.+|...+ ..+++++|.||++||++|+.+.|.|+++++.+.+ .+.++.||++.+.. ..++|.++||+
T Consensus 96 ~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 172 (210)
T 3apq_A 96 DPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDG--LLRIGAVNCGDDRMLCRMKGVNSYPSL 172 (210)
T ss_dssp CTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBT--TBEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcC--ceEEEEEECCccHHHHHHcCCCcCCeE
Confidence 3458999999999988 5688999999999999999999999999999953 69999999998774 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
++|++|.. +.++.|..+.+.|.+||.+....
T Consensus 173 ~~~~~G~~-~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 173 FIFRSGMA-AVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp EEECTTSC-CEECCSCCCHHHHHHHHHHHHHC
T ss_pred EEEECCCc-eeEecCCCCHHHHHHHHHHhCcc
Confidence 99977755 88899999999999999987643
No 90
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=2.2e-16 Score=116.34 Aligned_cols=98 Identities=27% Similarity=0.559 Sum_probs=84.1
Q ss_pred EEe-cccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEE
Q psy7938 175 KVL-VASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKL 250 (305)
Q Consensus 175 ~~l-~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~ 250 (305)
..+ +.++|++.+.+ .+++++|.||++||++|+.+.|.++++++.++ ++.++.+|++.+.. +.+++.++||+++
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 79 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS---NVIFLEVDVDDCQDVASESEVKSMPTFQF 79 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST---TSEEEEEETTTCHHHHHHTTCCBSSEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc---CeEEEEEEhhhhHHHHHHcCCCcCcEEEE
Confidence 444 45778877743 58899999999999999999999999999984 39999999998765 8999999999999
Q ss_pred EeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 251 YAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 251 f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++|+. ..++.|. +.+.|.+||++.
T Consensus 80 ~~~g~~-~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 80 FKKGQK-VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EETTEE-EEEEESS-CHHHHHHHHHHH
T ss_pred EECCeE-EEEEeCC-CHHHHHHHHHHh
Confidence 977654 7789999 999999999864
No 91
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.69 E-value=3.3e-18 Score=131.36 Aligned_cols=104 Identities=13% Similarity=0.095 Sum_probs=87.0
Q ss_pred CceecCCCCCCCChhHHH-HHhhhhhcCcc--cccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 17 DMAKYKPATPEINVDTVR-SFVTEFLAGNL--KHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~-~~iv~f~a~wc--~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
....++.++|+..+.+-. +++++|||+|| +||+.++|+++++ +.++.+++.|
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleel-------------------------a~e~~~~v~~ 70 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPEL-------------------------INAFPGRLVA 70 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHH-------------------------HHTSTTTEEE
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHH-------------------------HHHccCCcEE
Confidence 444565556664443333 79999999999 9999999999999 5556689999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
++||.| ++++++.+|||+ ++||+++|++|+.+.+.. |..+.++|.+++...+
T Consensus 71 ~KVdvD--e~~~la~~ygV~--siPTlilFkdG~~v~~~v---G~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 71 AEVAAE--AERGLMARFGVA--VCPSLAVVQPERTLGVIA---KIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECGG--GHHHHHHHHTCC--SSSEEEEEECCEEEEEEE---SCCCHHHHHHHHHHHH
T ss_pred EEEECC--CCHHHHHHcCCc--cCCEEEEEECCEEEEEEe---CCCCHHHHHHHHHHHh
Confidence 999999 999999999998 999999999998877773 7788899999999887
No 92
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.68 E-value=5.6e-18 Score=125.55 Aligned_cols=85 Identities=14% Similarity=0.194 Sum_probs=71.8
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.++++|||+||+||+.+.|.+.+++ ..+ +.+.|++||++ ++++++++|||
T Consensus 20 ~k~vvv~F~a~wC~~C~~~~p~~~~~~-------------------------~~~-~~~~~~~vd~d--~~~~l~~~~~V 71 (105)
T 3zzx_A 20 NKLVVIDFYATWCGPCKMIAPKLEELS-------------------------QSM-SDVVFLKVDVD--ECEDIAQDNQI 71 (105)
T ss_dssp TSEEEEEEECTTCHHHHHHHHHHHHHH-------------------------HHC-TTEEEEEEETT--TCHHHHHHTTC
T ss_pred CCEEEEEEECCCCCCccCCCcchhhhh-------------------------hcc-CCeEEEEEecc--cCHHHHHHcCC
Confidence 356788999999999999999888773 232 45889999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+ ++||+++|+.|+.+.++. | .+.++|.+|++++
T Consensus 72 ~--~~PT~~~~~~G~~v~~~~---G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 72 A--CMPTFLFMKNGQKLDSLS---G-ANYDKLLELVEKN 104 (105)
T ss_dssp C--BSSEEEEEETTEEEEEEE---S-CCHHHHHHHHHHH
T ss_pred C--eecEEEEEECCEEEEEEe---C-cCHHHHHHHHHhc
Confidence 8 999999999887767773 3 5889999999875
No 93
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.68 E-value=4.3e-17 Score=126.41 Aligned_cols=103 Identities=15% Similarity=0.214 Sum_probs=86.7
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC---------Ccccc--ccC
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA---------TVNEL--EHT 240 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~---------~~~~~--~~~ 240 (305)
+.+..++.++|.+.+.. +++|.||++||++|+.+.|.|+++++.++ +.++.+|+ +.+.. .+|
T Consensus 16 ~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~----v~~~~vd~~~~~~~~~~d~~~~l~~~~ 88 (135)
T 3emx_A 16 GRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD----VPIVMFIWGSLIGERELSAARLEMNKA 88 (135)
T ss_dssp TEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC----SCEEEEEECTTCCHHHHHHHHHHHHHH
T ss_pred CceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC----CEEEEEECCCchhhhhhhhhHHHHHHc
Confidence 45889999999998843 99999999999999999999999999883 88888888 44433 789
Q ss_pred CcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 241 KITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 241 ~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
+|.++||+++|++|+. ..++.|..+.+.+.+++++....+.
T Consensus 89 ~v~~~Pt~~~~~~G~~-v~~~~G~~~~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 89 GVEGTPTLVFYKEGRI-VDKLVGATPWSLKVEKAREIYGGEG 129 (135)
T ss_dssp TCCSSSEEEEEETTEE-EEEEESCCCHHHHHHHHHHHC----
T ss_pred CCceeCeEEEEcCCEE-EEEEeCCCCHHHHHHHHHHHhCCCc
Confidence 9999999999996644 7889999999999999998875543
No 94
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.68 E-value=8.8e-17 Score=136.56 Aligned_cols=128 Identities=15% Similarity=0.177 Sum_probs=98.6
Q ss_pred HHHHHHHcCcccccccCCCCCCccccCCcEEe-cccChhHHHhc--CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC
Q psy7938 146 SFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVL-VASNFDEIAFD--KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR 222 (305)
Q Consensus 146 ~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l-~~~~f~~~v~~--~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~ 222 (305)
+|+.++..+++.+..++.+ +.. ..+.|..| +..+|.+.+.. .+++|||+||++||++|+.+.|.|.++|..+.
T Consensus 88 ~fL~~~r~~Rl~el~~~~~-~~~-~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~-- 163 (245)
T 1a0r_P 88 NCLRKYRRQCMQDMHQKLS-FGP-RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYP-- 163 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCC-CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHHHhh-ccC-CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--
Confidence 3555555544444443322 222 44568899 78999999864 37899999999999999999999999999984
Q ss_pred CceEEEEEeCCcccc-ccCCcccccEEEEEeCCCceEEeeeCC-------CCHHHHHHHHHhcCC
Q psy7938 223 DDITIAKIDATVNEL-EHTKITSFPTLKLYAKDDNRVIDYNGE-------RVLEALSNFVESGGK 279 (305)
Q Consensus 223 ~~v~~~~id~~~~~~-~~~~i~~~Ptl~~f~~g~~~~~~~~g~-------~~~~~l~~fi~~~~~ 279 (305)
.+.|++||++.... ..|+|.++||+++|++|.. ..++.|. .+.+.|..||.++..
T Consensus 164 -~v~f~kVd~d~~~l~~~~~I~~~PTll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 164 -MVKFCKIKASNTGAGDRFSSDVLPTLLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp -TSEEEEEEHHHHCCTTSSCTTTCSEEEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred -CCEEEEEeCCcHHHHHHCCCCCCCEEEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 49999999987555 7899999999999997644 6677774 356789999998864
No 95
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.68 E-value=1.3e-16 Score=143.52 Aligned_cols=107 Identities=17% Similarity=0.228 Sum_probs=93.6
Q ss_pred ccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHH-------HHHHHHHhCCCCceEEEEEeCCcccc--ccC
Q psy7938 170 DKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPI-------YDKLGEKFADRDDITIAKIDATVNEL--EHT 240 (305)
Q Consensus 170 ~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~-------~~~la~~~~~~~~v~~~~id~~~~~~--~~~ 240 (305)
..+.|..|+.++|++.+ .++++++|.|||+||+ |+.+.|. |+++|..+++. ++.+++|||+.+.. +++
T Consensus 9 ~~~~v~~l~~~~f~~~i-~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~-~v~~~~Vd~~~~~~l~~~~ 85 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVL-KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK-DIGFVMVDAKKEAKLAKKL 85 (350)
T ss_dssp CCCCCEEECHHHHHHHH-TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS-SEEEEEEETTTTHHHHHHH
T ss_pred CCCccEECCHHHHHHHH-hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc-CcEEEEEeCCCCHHHHHhc
Confidence 33459999999999987 4578999999999999 9999888 99999999643 69999999998764 899
Q ss_pred CcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 241 KITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 241 ~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
+|+++||+++|++|+ +..|.|.++.+.|.+||.+....+
T Consensus 86 ~v~~~Pt~~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~~~ 124 (350)
T 1sji_A 86 GFDEEGSLYVLKGDR--TIEFDGEFAADVLVEFLLDLIEDP 124 (350)
T ss_dssp TCCSTTEEEEEETTE--EEEECSCCCHHHHHHHHHTTSSCS
T ss_pred CCCccceEEEEECCc--EEEecCCCCHHHHHHHHHHhcCCc
Confidence 999999999998874 679999999999999999887543
No 96
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.68 E-value=3.7e-16 Score=133.37 Aligned_cols=111 Identities=23% Similarity=0.461 Sum_probs=92.4
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC-CCceEEEEEeCC--cccc--ccCCcccc
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD-RDDITIAKIDAT--VNEL--EHTKITSF 245 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~id~~--~~~~--~~~~i~~~ 245 (305)
.+.|..|++++|++.+.+++++++|.||++||++|+.+.|.|+++++.+.+ ...+.++.+|++ .+.. +.++|+++
T Consensus 11 ~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~ 90 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGF 90 (244)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSS
T ss_pred CCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCcc
Confidence 446999999999999988889999999999999999999999999999964 247999999994 3333 89999999
Q ss_pred cEEEEEeCCCc----eEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 246 PTLKLYAKDDN----RVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 246 Ptl~~f~~g~~----~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
||+++|++|++ ....+.| .+.+.|.+||.+......
T Consensus 91 Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 91 PTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp SEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred CEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 99999998644 1335666 699999999988754433
No 97
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-17 Score=129.56 Aligned_cols=103 Identities=22% Similarity=0.361 Sum_probs=86.8
Q ss_pred CCcEEecccChhHHHhcCC-CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcc-----
Q psy7938 172 NAVKVLVASNFDEIAFDKS-KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKIT----- 243 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~-~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~----- 243 (305)
+.|..++.++|.+.+.... ++++|.||++||++|+.+.|.|+++++.+.+ .++.++.+|++.+.. .+++|.
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~-~~v~~~~vd~~~~~~~~~~~~v~~~~~~ 85 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNC-TGLNFGKVDVGRYTDVSTRYKVSTSPLT 85 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCS-SSCEEEECCTTTCHHHHHHTTCCCCSSS
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCccCHHHHHHccCcccCCc
Confidence 3489999999999885444 4999999999999999999999999999963 479999999988765 789998
Q ss_pred -cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 244 -SFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 244 -~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
++||+++|++|+. ..++.|..+.+.|.+||.+
T Consensus 86 ~~~Pt~~~~~~G~~-~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 86 KQLPTLILFQGGKE-AMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SCSSEEEEESSSSE-EEEESCBCSSSCBCCCCCC
T ss_pred CCCCEEEEEECCEE-EEEecCcCchHHHHHHHhc
Confidence 9999999977654 7788998877666666543
No 98
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.67 E-value=2.5e-16 Score=119.09 Aligned_cols=102 Identities=24% Similarity=0.408 Sum_probs=85.6
Q ss_pred cEEe--cccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEE
Q psy7938 174 VKVL--VASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLK 249 (305)
Q Consensus 174 v~~l--~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~ 249 (305)
|..+ +..+|.+.+.+++++++|.||++||++|+.+.|.|++++..+ .++.++.+|++.+.. ++++|.++||++
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~---~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN---KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC---TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC---CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 6777 467888767667899999999999999999999999999998 479999999998764 899999999999
Q ss_pred EEeC----CCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 250 LYAK----DDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 250 ~f~~----g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
+|++ |. ...++.|..+ +.|.+.+.++...
T Consensus 82 ~~~~~~~~G~-~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 82 FVKKEGNEIK-TLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp EEEEETTEEE-EEEEEESCCH-HHHHHHHHHHC--
T ss_pred EEeCCCCcce-EEEeecCCCH-HHHHHHHHHhhhc
Confidence 9987 43 3778888765 4699999987654
No 99
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.67 E-value=4.3e-16 Score=121.83 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=81.3
Q ss_pred cccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCC
Q psy7938 178 VASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 178 ~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g 254 (305)
+.++|++.+.+ ++++++|.||++||++|+.+.|.++++++.+. +++.++.+|++.+.. .+++|.++||+++|++|
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G 87 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK--NFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRN 87 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT--TTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETT
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC--CCeEEEEEccccCHHHHHHcCCCCCCEEEEEECC
Confidence 45788877755 68999999999999999999999999999995 369999999998764 89999999999999887
Q ss_pred CceEE--------eeeCCCC-HHHHHHHHHhcC
Q psy7938 255 DNRVI--------DYNGERV-LEALSNFVESGG 278 (305)
Q Consensus 255 ~~~~~--------~~~g~~~-~~~l~~fi~~~~ 278 (305)
+.... .+.|..+ .+.|.++|++..
T Consensus 88 ~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 88 KHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp EEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred cEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 54221 3556554 888999888754
No 100
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.66 E-value=9.7e-17 Score=125.41 Aligned_cols=105 Identities=12% Similarity=0.106 Sum_probs=75.5
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCC--ChhhhhHHHHHHHHHHHhCCCCceE--EEEEeCCcccc--ccCCccccc
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPW--CGHCKQLAPIYDKLGEKFADRDDIT--IAKIDATVNEL--EHTKITSFP 246 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~--C~~C~~~~~~~~~la~~~~~~~~v~--~~~id~~~~~~--~~~~i~~~P 246 (305)
.+..++.++|++.+. .++.++|+|+++| |++|+.+.|.|+++++.+ + ++. +++||++.+.. .+|+|+++|
T Consensus 18 ~~~~l~~~~f~~~i~-~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~--~v~~~~~~Vd~d~~~~la~~~~V~~iP 93 (142)
T 2es7_A 18 GWQPVEASTVDDWIK-RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-P--QFDWQVAVADLEQSEAIGDRFNVRRFP 93 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-T--TSCCEEEEECHHHHHHHHHTTTCCSSS
T ss_pred cCcccccccHHHHHH-hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c--ccceeEEEEECCCCHHHHHhcCCCcCC
Confidence 378889999999884 4556888999887 999999999999999998 3 577 99999998765 889999999
Q ss_pred EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 247 TLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 247 tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
|+++|++|+. ..++.|..+.+.|.+||++....+.
T Consensus 94 T~~~fk~G~~-v~~~~G~~~~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 94 ATLVFTDGKL-RGALSGIHPWAELLTLMRSIVDTPA 128 (142)
T ss_dssp EEEEESCC-----CEESCCCHHHHHHHHHHHHC---
T ss_pred eEEEEeCCEE-EEEEeCCCCHHHHHHHHHHHhcccc
Confidence 9999976654 7889999999999999998765433
No 101
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.65 E-value=1.2e-16 Score=120.76 Aligned_cols=99 Identities=11% Similarity=0.157 Sum_probs=81.3
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----cc-ccCCcccccE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----EL-EHTKITSFPT 247 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----~~-~~~~i~~~Pt 247 (305)
+..++.++|.+.+ .++++++|.||++||++|+.+.|.++++++.+. ..+.++.++...+ .. ..++|.++||
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt 90 (118)
T 1zma_A 14 LEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPG 90 (118)
T ss_dssp SEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHC--CCCEEEETTCGGGHHHHHHHHHHHTCCSSCE
T ss_pred hhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcC--CeEEEEECCCcCcHHHHHHHHHHcCCCCCCe
Confidence 7788889999877 457899999999999999999999999999884 3566664443221 12 6899999999
Q ss_pred EEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 248 LKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
+++|++|+. ..++.|..+.+.|.+||++
T Consensus 91 ~~~~~~G~~-~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 91 FVHITDGQI-NVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp EEEEETTEE-EEECCTTCCHHHHHHHHTC
T ss_pred EEEEECCEE-EEEecCCCCHHHHHHHhhC
Confidence 999987654 7889999999999999863
No 102
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.65 E-value=3.1e-18 Score=131.98 Aligned_cols=102 Identities=6% Similarity=-0.076 Sum_probs=84.1
Q ss_pred ecCCCCCCCChhHHHHHhhhhhcCc--ccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCce-EEEEEE
Q psy7938 20 KYKPATPEINVDTVRSFVTEFLAGN--LKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLK-VLFVTI 96 (305)
Q Consensus 20 ~~~~~~~~~~~~~~~~~iv~f~a~w--c~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~v 96 (305)
.++.++|+..+.+..+++|+|||+| ||+|+.++|+++++ +.++.++ +.|++|
T Consensus 21 ~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleel-------------------------a~e~~g~~v~~~KV 75 (140)
T 2qgv_A 21 PVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGEL-------------------------LHEFPDYTWQVAIA 75 (140)
T ss_dssp ECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHH-------------------------HTTCTTSCCEEEEC
T ss_pred cCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHH-------------------------HHHcCCCeEEEEEE
Confidence 3433334433334446888999999 99999999999999 4555688 999999
Q ss_pred eCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 97 NTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 97 d~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
|.| ++++++.+|||+ ++||+++|+.|+.+.+.. |..+.+.|.+++...++
T Consensus 76 dvD--e~~~lA~~ygV~--sIPTlilFk~G~~v~~~~---G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 76 DLE--QSEAIGDRFGAF--RFPATLVFTGGNYRGVLN---GIHPWAELINLMRGLVE 125 (140)
T ss_dssp CHH--HHHHHHHHHTCC--SSSEEEEEETTEEEEEEE---SCCCHHHHHHHHHHHHC
T ss_pred ECC--CCHHHHHHcCCc--cCCEEEEEECCEEEEEEe---cCCCHHHHHHHHHHHhc
Confidence 999 999999999998 999999999998777773 67888999999999874
No 103
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.65 E-value=6.2e-18 Score=131.90 Aligned_cols=91 Identities=9% Similarity=0.040 Sum_probs=76.8
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.++++++|||+||+||+.++|+++++ ++++.+++.|++||.| ++++++.+|+|
T Consensus 41 ~k~VVVdF~A~WCgPCk~m~Pvleel-------------------------A~e~~~~v~f~kVDVD--e~~e~a~~y~V 93 (160)
T 2av4_A 41 ERLVCIRFGHDYDPDCMKMDELLYKV-------------------------ADDIKNFCVIYLVDIT--EVPDFNTMYEL 93 (160)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHH-------------------------HHHHTTTEEEEEEETT--TCCTTTTTTTC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHH-------------------------HHHccCCcEEEEEECC--CCHHHHHHcCC
Confidence 45689999999999999999999999 4444577999999999 99999999999
Q ss_pred CCCCCCeEEEEecCcCc--e-------eccCCCCCCC-HHHHHHHHHHHHcCc
Q psy7938 113 SKDEVPSLRLIRLEEDM--A-------KYKPATPEIS-VDTVRSFVTEFLAGN 155 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~--~-------~~~~~~~~~~-~~~l~~fv~~~~~~~ 155 (305)
. +.||+++|+.|+.+ . +. .|..+ .++|+++++.++.+-
T Consensus 94 ~--siPT~~fFk~G~~v~vd~Gtgd~~k~---vGa~~~k~~l~~~ie~~~r~a 141 (160)
T 2av4_A 94 Y--DPVSVMFFYRNKHMMIDLGTGNNNKI---NWPMNNKQEFIDIVETIFRGA 141 (160)
T ss_dssp C--SSEEEEEEETTEEEEEECSSSCCSCB---CSCCCCHHHHHHHHHHHHHHH
T ss_pred C--CCCEEEEEECCEEEEEecCCCCcCeE---EeecCCHHHHHHHHHHHHHHh
Confidence 8 99999999988764 2 34 35555 889999999887653
No 104
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.65 E-value=2.3e-16 Score=119.77 Aligned_cols=103 Identities=21% Similarity=0.533 Sum_probs=87.4
Q ss_pred CCcEEecc-cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEE
Q psy7938 172 NAVKVLVA-SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTL 248 (305)
Q Consensus 172 ~~v~~l~~-~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl 248 (305)
..+..+++ ++|++.+ +.+++++|.||++||++|+.+.|.|+++++.+.+. ++.++.+|++.+.. +.++|.++||+
T Consensus 15 ~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~-~v~~~~vd~d~~~~~~~~~~v~~~Pt~ 92 (121)
T 2j23_A 15 GSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD-KVGFYKVDVDEQSQIAQEVGIRAMPTF 92 (121)
T ss_dssp CCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-HSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred cceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-cEEEEEEECcCCHHHHHHcCCCcccEE
Confidence 34677755 8898887 67889999999999999999999999999888531 49999999998764 88999999999
Q ss_pred EEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 249 KLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|++|+. ..++.|. +.+.|.+||++..
T Consensus 93 ~~~~~G~~-~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 93 VFFKNGQK-IDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEETTEE-EEEEESS-CHHHHHHHHHHHT
T ss_pred EEEECCeE-EeeEcCC-CHHHHHHHHHHhh
Confidence 99986644 7788998 9999999998753
No 105
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.65 E-value=6.3e-16 Score=116.34 Aligned_cols=103 Identities=22% Similarity=0.421 Sum_probs=87.3
Q ss_pred CCcEEe-cccChhHHHhc---CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccc
Q psy7938 172 NAVKVL-VASNFDEIAFD---KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSF 245 (305)
Q Consensus 172 ~~v~~l-~~~~f~~~v~~---~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~ 245 (305)
+.+..+ +.++|++.+.. .+++++|.||++||++|+.+.|.++++++.++ ++.++.+|++.+.. +.+++.++
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~v~~~ 82 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP---GAIFLKVDVDELKDVAEAYNVEAM 82 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCCSB
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC---CcEEEEEEcccCHHHHHHcCCCcC
Confidence 347777 56889888754 47899999999999999999999999999984 69999999998764 88999999
Q ss_pred cEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 246 PTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 246 Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
||+++|++|+. ..++.| .+.+.|.++|.+...
T Consensus 83 Pt~~~~~~g~~-~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 83 PTFLFIKDGEK-VDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp SEEEEEETTEE-EEEEES-CCHHHHHHHHHHHHC
T ss_pred cEEEEEeCCeE-EEEecC-CCHHHHHHHHHHHhc
Confidence 99999976644 677888 588999999998754
No 106
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.65 E-value=6.4e-16 Score=115.39 Aligned_cols=102 Identities=25% Similarity=0.450 Sum_probs=86.4
Q ss_pred CCcEEe-cccChhHHHhc---CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccc
Q psy7938 172 NAVKVL-VASNFDEIAFD---KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSF 245 (305)
Q Consensus 172 ~~v~~l-~~~~f~~~v~~---~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~ 245 (305)
+.+..+ +.++|.+.+.. .+++++|.||++||++|+.+.|.+++++..+. ++.++.+|++.+.. +.+++.++
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~~ 80 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP---NVTFLKVDVDELKAVAEEWNVEAM 80 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS---SEEEEEEETTTCHHHHHHHHCSST
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC---CcEEEEEEccccHHHHHhCCCCcc
Confidence 447777 56889988854 57899999999999999999999999999984 69999999998764 88999999
Q ss_pred cEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 246 PTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 246 Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
||+++|++|.. ..++.| .+.+.|.++|++..
T Consensus 81 Pt~~~~~~G~~-~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 81 PTFIFLKDGKL-VDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp TEEEEEETTEE-EEEEEC-CCTTHHHHHHHHHH
T ss_pred cEEEEEeCCEE-EEEEec-CCHHHHHHHHHHhh
Confidence 99999976643 677888 58889999998753
No 107
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.65 E-value=6e-16 Score=131.56 Aligned_cols=102 Identities=17% Similarity=0.344 Sum_probs=89.9
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEE--CCCChhhhhHHHHHHHHHHHhCC-CCceEEEEEeCCc-----ccc--ccCC
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFY--APWCGHCKQLAPIYDKLGEKFAD-RDDITIAKIDATV-----NEL--EHTK 241 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~--~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~id~~~-----~~~--~~~~ 241 (305)
+.|..|+..+|++++ ++++++||.|| ||||+ +.|.|+++|..+.+ .+++.|++|||+. +.. .+|+
T Consensus 16 ~~v~~Lt~~nF~~vi-~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 16 TGCVDLDELSFEKTV-ERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp TTCEECCTTTHHHHH-TTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCcEECCHHHHHHHH-hcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 348999999999955 67889999999 99999 99999999999965 4689999999987 443 8999
Q ss_pred cc--cccEEEEEeCCC-ceEEee--eCCCCHHHHHHHHHhcCC
Q psy7938 242 IT--SFPTLKLYAKDD-NRVIDY--NGERVLEALSNFVESGGK 279 (305)
Q Consensus 242 i~--~~Ptl~~f~~g~-~~~~~~--~g~~~~~~l~~fi~~~~~ 279 (305)
|+ +|||+++|+ |. ..+..| .|.++.+.|.+||+++..
T Consensus 91 V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 91 VDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp CCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred CCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 99 999999999 76 347889 999999999999999875
No 108
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.64 E-value=9.8e-16 Score=119.03 Aligned_cols=105 Identities=23% Similarity=0.340 Sum_probs=88.6
Q ss_pred ccCCcEEec-ccChhHHHh---cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcc
Q psy7938 170 DKNAVKVLV-ASNFDEIAF---DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKIT 243 (305)
Q Consensus 170 ~~~~v~~l~-~~~f~~~v~---~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~ 243 (305)
..+.+..++ .++|.+.+. ..+++++|.||++||++|+.+.|.+++++..+. ++.++.+|++.+.. ..|+|.
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~---~v~~~~v~~~~~~~~~~~~~v~ 98 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP---SLMFLVIDVDELSDFSASWEIK 98 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEETTTSHHHHHHTTCC
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC---CCEEEEEeCcccHHHHHHcCCC
Confidence 344577775 689998874 357899999999999999999999999999983 69999999998774 899999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
++||+++|++|+. ..++.|. +.+.|.++|.+...
T Consensus 99 ~~Pt~~~~~~G~~-~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 99 ATPTFFFLRDGQQ-VDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp EESEEEEEETTEE-EEEEESC-CHHHHHHHHHHHHH
T ss_pred cccEEEEEcCCeE-EEEEeCC-CHHHHHHHHHHHhc
Confidence 9999999976643 7788898 88999999998754
No 109
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.64 E-value=3.7e-16 Score=120.77 Aligned_cols=105 Identities=14% Similarity=0.353 Sum_probs=86.5
Q ss_pred ccCCcEEecc-cChhHHHhcC-CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccc
Q psy7938 170 DKNAVKVLVA-SNFDEIAFDK-SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSF 245 (305)
Q Consensus 170 ~~~~v~~l~~-~~f~~~v~~~-~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~ 245 (305)
..+.+..+++ ++|.+.+.+. +++++|.||++||++|+.+.|.|+++++.+ ++.++.+|++.+.. ..|+|.++
T Consensus 18 ~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~----~v~~~~vd~~~~~~l~~~~~v~~~ 93 (133)
T 3cxg_A 18 GQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY----YVTLVDIDVDIHPKLNDQHNIKAL 93 (133)
T ss_dssp TTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE----ECEEEEEETTTCHHHHHHTTCCSS
T ss_pred CCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc----CEEEEEEeccchHHHHHhcCCCCC
Confidence 3345888875 7888777443 579999999999999999999999998877 58999999998774 78999999
Q ss_pred cEEEEEe--CCC-ceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 246 PTLKLYA--KDD-NRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 246 Ptl~~f~--~g~-~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
||+++|+ +|+ ....++.|. +.+.|.++|++...
T Consensus 94 Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 94 PTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp SEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred CEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 9999996 554 136778888 89999999998764
No 110
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.64 E-value=2.1e-15 Score=127.32 Aligned_cols=187 Identities=14% Similarity=0.177 Sum_probs=137.2
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMS 113 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~ 113 (305)
..+|+-|+++||... .+.|.+++..+ ..+.|+... ..++|.+++|+
T Consensus 28 ~v~vVgff~~~~~~~---~~~f~~~A~~l--------------------------~~~~F~~t~-----~~~v~~~~~v~ 73 (227)
T 4f9z_D 28 EVAVIGFFQDLEIPA---VPILHSMVQKF--------------------------PGVSFGIST-----DSEVLTHYNIT 73 (227)
T ss_dssp SEEEEEECSCSCSTH---HHHHHHHTTTC--------------------------TTSEEEEEC-----CHHHHHHTTCC
T ss_pred CeEEEEEecCCCchh---HHHHHHHHHhC--------------------------CCceEEEEC-----CHHHHHHcCCC
Confidence 344556999987644 35555553333 357787654 25789999996
Q ss_pred CCCCCeEEEEecCcC-ceeccCC-CCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCC
Q psy7938 114 KDEVPSLRLIRLEED-MAKYKPA-TPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSK 191 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~-~~~~~~~-~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~ 191 (305)
+ |++++|+.... ...|.+. .|.++.++|.+|+.... .+.|.+++..++.++......
T Consensus 74 --~-p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~------------------~plv~e~t~~n~~~~~~~~~~ 132 (227)
T 4f9z_D 74 --G-NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINS------------------LHMVTEYNPVTVIGLFNSVIQ 132 (227)
T ss_dssp --S-SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHC------------------CCSEEECCHHHHHHHHHSSCC
T ss_pred --C-CeEEEEEecCcccccccccccCCCCHHHHHHHHHHhC------------------CCceeecCcccHHHHhccCCc
Confidence 6 99999997543 2344210 03689999999999983 223899999999988754445
Q ss_pred cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--cc--cccCCcc--cccEEEEEeCCCceEEee-eCC
Q psy7938 192 HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--NE--LEHTKIT--SFPTLKLYAKDDNRVIDY-NGE 264 (305)
Q Consensus 192 ~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--~~--~~~~~i~--~~Ptl~~f~~g~~~~~~~-~g~ 264 (305)
.+++.|+.+||+.|..+.+.|+++|+.+++ ++.|+.+|++. +. ...++++ .+|++++++.++.....+ .|.
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~--~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~ 210 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQG--KILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAE 210 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTT--TCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCC
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhC--CEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCC
Confidence 566778899999999999999999999965 68999999964 22 2788888 899999998654323444 378
Q ss_pred CCHHHHHHHHHhc
Q psy7938 265 RVLEALSNFVESG 277 (305)
Q Consensus 265 ~~~~~l~~fi~~~ 277 (305)
.+.+.|.+|+.+-
T Consensus 211 ~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 211 VSVEHVQNFCDGF 223 (227)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8999999999864
No 111
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.63 E-value=2.8e-15 Score=126.97 Aligned_cols=102 Identities=26% Similarity=0.452 Sum_probs=89.6
Q ss_pred CCcEEecccChhHHHhcCCCcEEEEEEC--CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----ccc--ccCCc
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVEFYA--PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-----NEL--EHTKI 242 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~f~~--~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-----~~~--~~~~i 242 (305)
..|..|+..+|++.+ +.+++++|.||+ |||+ +.|.|+++|..+.+.+++.|++||++. +.. .+|+|
T Consensus 5 ~~v~~Lt~~nF~~~i-~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYKVI-PKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHHHG-GGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHHHH-cCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 348899999999976 567899999999 9999 999999999999765689999999543 442 89999
Q ss_pred c--cccEEEEEeCCC-ceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 243 T--SFPTLKLYAKDD-NRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 243 ~--~~Ptl~~f~~g~-~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+ ++||+++|++|. ..+..|.|.++.+.|.+||.++.
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 9 999999999987 34789999999999999999986
No 112
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.63 E-value=3.6e-15 Score=140.09 Aligned_cols=112 Identities=21% Similarity=0.389 Sum_probs=95.2
Q ss_pred cCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCC-CCceEEEEEeCCc--cc--cccCCcccc
Q psy7938 171 KNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFAD-RDDITIAKIDATV--NE--LEHTKITSF 245 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~-~~~v~~~~id~~~--~~--~~~~~i~~~ 245 (305)
...|..+++++|++.+.+++++++|+|||+||++|+.+.|.|+++++.+++ ...+.++.||++. +. +++|+|.++
T Consensus 11 ~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~ 90 (519)
T 3t58_A 11 SDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGF 90 (519)
T ss_dssp TSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSB
T ss_pred CCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCccc
Confidence 345999999999999988889999999999999999999999999999964 3479999999964 33 289999999
Q ss_pred cEEEEEeCCCc---eEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 246 PTLKLYAKDDN---RVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 246 Ptl~~f~~g~~---~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
||+++|++|++ ....+.|..+.+.|.++|.+......
T Consensus 91 PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 91 PTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR 130 (519)
T ss_dssp SEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC
T ss_pred CEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc
Confidence 99999997433 35677888999999999998765443
No 113
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.42 E-value=3.2e-17 Score=120.78 Aligned_cols=101 Identities=31% Similarity=0.604 Sum_probs=88.2
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
|..++.++|.+.+.+.+++++|.||++||++|+.+.|.+++++..+.+ ++.++.+|++.+.. +.+++.++||+++|
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG--KVKVVKVNVDENPNTAAQYGIRSIPTLLLF 80 (106)
Confidence 678888999988777789999999999999999999999999999853 68999999887664 89999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
++|+. ..++.|..+.+.|.+||++.
T Consensus 81 ~~g~~-~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 81 KNGQV-VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 66544 77889999999999998753
No 114
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.61 E-value=4.9e-17 Score=130.86 Aligned_cols=114 Identities=11% Similarity=0.089 Sum_probs=88.2
Q ss_pred cCceecCCCCCCCChhH--HHHHhhhhhc-------CcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhh
Q psy7938 16 EDMAKYKPATPEINVDT--VRSFVTEFLA-------GNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLA 86 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~iv~f~a-------~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (305)
+.++.++.++|+..+.+ ..++||+||| +||++|+.++|.|++++..+.. ..
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~--------------------~~ 77 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRS--------------------QA 77 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHH--------------------HC
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhh--------------------cc
Confidence 45777877777744332 3357999999 4999999999999999555421 11
Q ss_pred cCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCce------------eccCCCC-CCCHHHHHHHHHHHHc
Q psy7938 87 GNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMA------------KYKPATP-EISVDTVRSFVTEFLA 153 (305)
Q Consensus 87 ~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~------------~~~~~~~-~~~~~~l~~fv~~~~~ 153 (305)
..++|.|++||++ ++++++++|||+ ++||+++|++|+... .|.+..+ .++++.|.+|+.+.++
T Consensus 78 ~~~~v~f~kvD~d--~~~~la~~~~I~--siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 78 PQSLNLFFTVDVN--EVPQLVKDLKLQ--NVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILN 153 (178)
T ss_dssp TTCCEEEEEEETT--TCHHHHHHTTCC--SSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECc--cCHHHHHHcCCC--CCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcC
Confidence 1278999999999 899999999998 999999999886432 3433334 7899999999999876
No 115
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=1e-16 Score=123.06 Aligned_cols=113 Identities=15% Similarity=0.177 Sum_probs=89.3
Q ss_pred EEEEeeccCceecCCCCCCC-ChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhc
Q psy7938 9 LRLIRLEEDMAKYKPATPEI-NVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAG 87 (305)
Q Consensus 9 i~l~~~~~~~~~~~~~~~~~-~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (305)
..++..+..+..++.++|+. ..++.+.+++.||++||++|+.+.|.+.++ +..+
T Consensus 10 ~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~-------------------------~~~~ 64 (130)
T 2dml_A 10 SGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKA-------------------------ATAL 64 (130)
T ss_dssp CCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHH-------------------------HHHT
T ss_pred ccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHH-------------------------HHHh
Confidence 34455566778887666653 224457899999999999999999888776 3444
Q ss_pred CceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 88 NLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 88 ~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
++.+.|+.||++ ++..++++|+|. ++||+++|+.++. ...+ .|.++.++|.+|+.+.+.
T Consensus 65 ~~~~~~~~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~~~~~~~~~---~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 65 KDVVKVGAVNAD--KHQSLGGQYGVQ--GFPTIKIFGANKNKPEDY---QGGRTGEAIVDAALSALR 124 (130)
T ss_dssp TTTSEEEEEETT--TCHHHHHHHTCC--SSSEEEEESSCTTSCEEC---CSCCSHHHHHHHHHHHHH
T ss_pred cCceEEEEEeCC--CCHHHHHHcCCC--ccCEEEEEeCCCCeEEEe---ecCCCHHHHHHHHHHHHh
Confidence 566899999999 889999999998 9999999998765 4555 377899999999999864
No 116
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=1.9e-16 Score=123.16 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=87.4
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
...+..++.++|+....+.+.+|+.||++||++|+.+.|.+.++...+ ......+.|+
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~----------------------~~~~~~v~~~ 73 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTL----------------------KDNDPPIAVA 73 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHH----------------------HSSSSCCEEE
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHH----------------------hccCCceEEE
Confidence 456777766666655555678899999999999999998887773333 1111249999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~ 156 (305)
.||++ ++..++++|+|. ++||+++|+.|+ ...+ .|.++.++|.+|+.+.+....
T Consensus 74 ~vd~~--~~~~~~~~~~v~--~~Pt~~~~~~G~-~~~~---~g~~~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 74 KIDAT--SASMLASKFDVS--GYPTIKILKKGQ-AVDY---DGSRTQEEIVAKVREVSQPDW 127 (140)
T ss_dssp EECTT--TCHHHHHHTTCC--SSSEEEEEETTE-EEEC---CSCCCHHHHHHHHHHHHSSSC
T ss_pred EEeCc--ccHHHHHHCCCC--ccCeEEEEECCc-EEEc---CCCCCHHHHHHHHHHhcCCCC
Confidence 99999 788999999998 999999998776 4555 378899999999999986543
No 117
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.59 E-value=3e-15 Score=114.80 Aligned_cols=106 Identities=21% Similarity=0.351 Sum_probs=86.1
Q ss_pred cEEecccChhHHHh---cCCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCc--cc-c-ccCCcc
Q psy7938 174 VKVLVASNFDEIAF---DKSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATV--NE-L-EHTKIT 243 (305)
Q Consensus 174 v~~l~~~~f~~~v~---~~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~--~~-~-~~~~i~ 243 (305)
...++..+|.+.+. ..+++++|.||++||++|+.+.|.+ ..+++.+. .++.++.+|++. +. . ..++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN--RHFVNLKMDMEKGEGVELRKKYGVH 85 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH--HHSEEEEECSSSTTHHHHHHHTTCC
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh--cCeEEEEEecCCcchHHHHHHcCCC
Confidence 34457788888773 3578999999999999999999999 77777763 368899999884 22 2 889999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++||+++|+++++...++.|..+.+.|.+||++.....
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp SSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 99999999665565778999999999999999876443
No 118
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.57 E-value=7.6e-17 Score=120.09 Aligned_cols=89 Identities=15% Similarity=0.223 Sum_probs=75.3
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+.+++.|+.||++ +++.++++|+|
T Consensus 22 ~~~vlv~f~a~~C~~C~~~~~~~~~~-------------------------~~~~~~~v~~~~vd~~--~~~~l~~~~~v 74 (111)
T 3gnj_A 22 GKACLVMFSRKNCHVCQKVTPVLEEL-------------------------RLNYEESFGFYYVDVE--EEKTLFQRFSL 74 (111)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHHHHH-------------------------HHHTTTTSEEEEEETT--TCHHHHHHTTC
T ss_pred CCEEEEEEeCCCChhHHHHHHHHHHH-------------------------HHHcCCceEEEEEECC--cChhHHHhcCC
Confidence 46778899999999999998888777 3444567999999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|+...++ .|..+.++|.+|+.+.+.
T Consensus 75 ~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 75 K--GVPQILYFKDGEYKGKM---AGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp C--SSCEEEEEETTEEEEEE---ESSCCHHHHHHHHHHHHH
T ss_pred C--cCCEEEEEECCEEEEEE---eccCCHHHHHHHHHHHhc
Confidence 8 99999999888665566 367899999999998764
No 119
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.57 E-value=4.6e-16 Score=142.95 Aligned_cols=100 Identities=21% Similarity=0.306 Sum_probs=82.8
Q ss_pred cCCcEEecccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCC------ceEEEEEeCCcccc--ccCC
Q psy7938 171 KNAVKVLVASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRD------DITIAKIDATVNEL--EHTK 241 (305)
Q Consensus 171 ~~~v~~l~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~------~v~~~~id~~~~~~--~~~~ 241 (305)
.+.|..++.++|++.+.. .+++++|.|||+||++|+.+.|.|+++++.+.... .+.|++||++.+.. .+|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~ 101 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYD 101 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcC
Confidence 456999999999998743 44799999999999999999999999999997432 59999999998864 8999
Q ss_pred cccccEEEEEeCCCc-eEEeeeCCCCHHHH
Q psy7938 242 ITSFPTLKLYAKDDN-RVIDYNGERVLEAL 270 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~-~~~~~~g~~~~~~l 270 (305)
|.++||+++|++|+. .+..|.|.++.+.|
T Consensus 102 V~~~PTlilf~~gg~~~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 102 INFVPRLFFFYPRDSCRSNEECGTSSLEHV 131 (470)
T ss_dssp CCSSCEEEEEEESSCCCTTSCCCCCCEEEE
T ss_pred CCccCeEEEEECCCceEEEEeeCCCCHHHH
Confidence 999999999976543 36678886655443
No 120
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.57 E-value=2.3e-16 Score=116.89 Aligned_cols=105 Identities=14% Similarity=0.180 Sum_probs=85.3
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
+.+..++.++++....+.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~ 58 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKV-------------------------AEKYKGKAVFGR 58 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTSEEEE
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHH-------------------------HHHhCCCceEEE
Confidence 3455666666665556678889999999999999998888777 344456799999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
||++ ++..++++|+|. ++||+++|..|.....+ .|..+.++|.+++.+.+
T Consensus 59 v~~~--~~~~~~~~~~i~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 59 LNVD--ENQKIADKYSVL--NIPTTLIFVNGQLVDSL---VGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHC
T ss_pred Eccc--cCHHHHHhcCcc--cCCEEEEEcCCcEEEee---eccCCHHHHHHHHHHHh
Confidence 9999 889999999998 99999999877665566 36789999999998874
No 121
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.56 E-value=1.2e-16 Score=118.09 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=68.0
Q ss_pred CCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHH
Q psy7938 25 TPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQ 104 (305)
Q Consensus 25 ~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~ 104 (305)
+++...++.+++++.|||+||++|+.+.|.+.++ +..+ +.+.|+.||++ +++
T Consensus 10 ~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~-------------------------~~~~-~~~~~~~vd~~--~~~ 61 (105)
T 4euy_A 10 ELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYV-------------------------LENY-NYVEKIEILLQ--DMQ 61 (105)
T ss_dssp CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHH-------------------------HHTC-TTEEEEEEEEC--CC-
T ss_pred HHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHH-------------------------HHHc-CCceEEEEECC--CCH
Confidence 3444445567899999999999999998888777 3333 46999999999 888
Q ss_pred HHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 105 KILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 105 ~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
.++++|+|. ++||+++|+.|+.+.++ .|..+.++|.+++.+.
T Consensus 62 ~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 62 EIAGRYAVF--TGPTVLLFYNGKEILRE---SRFISLENLERTIQLF 103 (105)
T ss_dssp --------C--CCCEEEEEETTEEEEEE---ESSCCHHHHHHHHHTT
T ss_pred HHHHhcCCC--CCCEEEEEeCCeEEEEE---eCCcCHHHHHHHHHHh
Confidence 999999998 99999999987665565 3678999999998865
No 122
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.56 E-value=4.2e-16 Score=119.50 Aligned_cols=108 Identities=21% Similarity=0.395 Sum_probs=89.5
Q ss_pred cCCcEEe-cccChhHHHhc---CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCccc
Q psy7938 171 KNAVKVL-VASNFDEIAFD---KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITS 244 (305)
Q Consensus 171 ~~~v~~l-~~~~f~~~v~~---~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~ 244 (305)
.+.+..+ +.++|.+.+.. .+++++|.||++||++|+.+.|.|++++..++ ++.++.+|++.+.. .+++|.+
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~---~v~~~~v~~~~~~~~~~~~~v~~ 89 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP---GAVFLKVDVDELKEVAEKYNVEA 89 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT---TBCCEECCTTTSGGGHHHHTCCS
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CCEEEEEeccchHHHHHHcCCCc
Confidence 3457777 45889888854 58899999999999999999999999999984 68999999987764 8899999
Q ss_pred ccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 245 FPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
+||+++|++|+. ..++.| .+.+.|.++|++.......
T Consensus 90 ~Pt~~~~~~g~~-~~~~~g-~~~~~l~~~l~~~~~~~~~ 126 (130)
T 1wmj_A 90 MPTFLFIKDGAE-ADKVVG-ARKDDLQNTIVKHVGATAA 126 (130)
T ss_dssp SCCCCBCTTTTC-CBCCCT-TCTTTHHHHHHHHTSSSCS
T ss_pred cceEEEEeCCeE-EEEEeC-CCHHHHHHHHHHHHhccCC
Confidence 999999976654 667888 5788999999988765443
No 123
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.56 E-value=3.1e-16 Score=123.30 Aligned_cols=107 Identities=15% Similarity=0.181 Sum_probs=86.0
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
..+..++.++++....+.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.
T Consensus 38 ~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~-------------------------~~~~~~~~~~~~ 92 (148)
T 3p2a_A 38 GEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAET-------------------------AAERAGKVRFVK 92 (148)
T ss_dssp CCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEE
T ss_pred CCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHcCCceEEEE
Confidence 3455565555543335567789999999999999998888777 344456799999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
||++ ++..++++|+|. ++||+++|+.|+...++ .|..+.++|.+|+.+.+..
T Consensus 93 vd~~--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 93 VNTE--AEPALSTRFRIR--SIPTIMLYRNGKMIDML---NGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---SSCCCHHHHHHHHHHHHHS
T ss_pred EECc--CCHHHHHHCCCC--ccCEEEEEECCeEEEEE---eCCCCHHHHHHHHHHHhcc
Confidence 9999 889999999998 99999999887665566 3778999999999998764
No 124
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.55 E-value=9.8e-15 Score=111.10 Aligned_cols=99 Identities=17% Similarity=0.302 Sum_probs=81.7
Q ss_pred cEEecccChhHHHhc-CCCcEEEEEECC-------CChhhhhHHHHHHHHHHHhCCCCceEEEEEeC-------Ccccc-
Q psy7938 174 VKVLVASNFDEIAFD-KSKHVLVEFYAP-------WCGHCKQLAPIYDKLGEKFADRDDITIAKIDA-------TVNEL- 237 (305)
Q Consensus 174 v~~l~~~~f~~~v~~-~~~~~lv~f~~~-------~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~-------~~~~~- 237 (305)
+...+.++|.+.+.+ .+++++|.||++ ||++|+.+.|.+.++++.++ +++.++.+|+ +.+..
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~--~~~~~~~vd~~~~~~~~d~~~~~ 84 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHIS--EGCVFIYCQVGEKPYWKDPNNDF 84 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCC--TTEEEEEEECCCHHHHHCTTCHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcC--CCcEEEEEECCCchhhhchhHHH
Confidence 566677899988865 588999999999 99999999999999999885 3799999999 44443
Q ss_pred -ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 238 -EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 238 -~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
..++|.++||+++|++++. ...+.| .+.+.|.+||.+
T Consensus 85 ~~~~~i~~~Pt~~~~~~~~~-~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 85 RKNLKVTAVPTLLKYGTPQK-LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHCCCSSSEEEETTSSCE-EEGGGG-GCHHHHHHHHHC
T ss_pred HHHCCCCeeCEEEEEcCCce-Eecccc-CCHHHHHHHHhc
Confidence 6799999999999988544 444554 567889999875
No 125
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.55 E-value=1.7e-16 Score=119.57 Aligned_cols=113 Identities=12% Similarity=0.240 Sum_probs=87.7
Q ss_pred EeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceE
Q psy7938 12 IRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKV 91 (305)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 91 (305)
|+....+..++.++++....+.+.+++.||++||++|+.+.|.+.++...++ .....+
T Consensus 3 ~~~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~----------------------~~~~~v 60 (120)
T 1mek_A 3 PEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLK----------------------AEGSEI 60 (120)
T ss_dssp CCEETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTT----------------------TTCCCC
T ss_pred ccCCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHh----------------------ccCCcE
Confidence 3445667778777776555666788999999999999999988877743331 112468
Q ss_pred EEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCc--eeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 92 LFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDM--AKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 92 ~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~--~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
.|+.+|++ ++..++++|||. ++||+++|+.|+.. ..+ .|..+.++|.+|+.+.++
T Consensus 61 ~~~~vd~~--~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~~~---~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 61 RLAKVDAT--EESDLAQQYGVR--GYPTIKFFRNGDTASPKEY---TAGREADDIVNWLKKRTG 117 (120)
T ss_dssp BCEEEETT--TCCSSHHHHTCC--SSSEEEEEESSCSSSCEEC---CCCSSHHHHHHHHHTTSC
T ss_pred EEEEEcCC--CCHHHHHHCCCC--cccEEEEEeCCCcCCcccc---cCccCHHHHHHHHHhccC
Confidence 99999999 777899999998 99999999877654 455 367899999999988754
No 126
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=1.9e-16 Score=121.86 Aligned_cols=111 Identities=14% Similarity=0.227 Sum_probs=84.0
Q ss_pred cCceecCCCCCCCC-hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 16 EDMAKYKPATPEIN-VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
..+..++.++|+.. .++.+.+++.||++||++|+.+.|.+.++...++ ....+.+.|+
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~---------------------~~~~~~~~~~ 65 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVK---------------------EQTKGKVKLA 65 (133)
T ss_dssp CSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHH---------------------HHTTTSEEEE
T ss_pred CcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHH---------------------hhcCCcEEEE
Confidence 34555554444422 2334678999999999999999988877733331 1112569999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
.||++ ++..++++|+|. ++||+++|+.|.....+ .|.++.++|.+|+.+.+..
T Consensus 66 ~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~~~~~~---~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 66 AVDAT--VNQVLASRYGIR--GFPTIKIFQKGESPVDY---DGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp EEETT--TCCHHHHHHTCC--SSSEEEEEETTEEEEEE---CSCCSHHHHHHHHHHHHHH
T ss_pred EEECC--CCHHHHHhCCCC--eeCeEEEEeCCCceEEe---cCCCCHHHHHHHHHHHhhc
Confidence 99999 788999999998 99999999987655566 3778999999999998764
No 127
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.55 E-value=4.2e-16 Score=115.47 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=80.8
Q ss_pred CceecCCCCCC-CChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 17 DMAKYKPATPE-INVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
.++.++.++|+ ...++.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~ 57 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEI-------------------------ADEYQGKLTVAK 57 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTEEEEE
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHH-------------------------HHHhCCCcEEEE
Confidence 34555555554 2224457889999999999999998887766 344456799999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
||++ ++..++++|||. ++||+++|+.|....++ .|..+.++|.+++.+.+
T Consensus 58 v~~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 58 LNID--QNPGTAPKYGIR--GIPTLLLFKNGEVAATK---VGALSKGQLKEFLDANL 107 (108)
T ss_dssp EETT--TCTTHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHH
T ss_pred EECC--CCHHHHHHcCCc--ccCEEEEEeCCEEEEEE---ecCCCHHHHHHHHHHhh
Confidence 9999 778999999998 99999999877654555 36788999999998875
No 128
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.54 E-value=3.7e-16 Score=120.39 Aligned_cols=113 Identities=12% Similarity=0.170 Sum_probs=85.6
Q ss_pred ccCceecCCCCCCCChh-HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 15 EEDMAKYKPATPEINVD-TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~-~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
...+..++.++|+..+. +.+.+++.||++||++|+.+.|.+.+++..++ ..+.+.|
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-----------------------~~~~~~~ 62 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYK-----------------------GQKDLVI 62 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHT-----------------------TSSSEEE
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc-----------------------CCCCEEE
Confidence 34567777777775543 46789999999999999999888877633221 1156999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
+.||++ ++..++++|+|. ++||+++|+.|+.+.......|.++.++|.+|+.+.+..
T Consensus 63 ~~vd~~--~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 63 AKMDAT--ANDITNDQYKVE--GFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp EEECTT--TSCCCCSSCCCS--SSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred EEecCC--cCHHHHhhcCCC--cCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 999999 777888999998 999999999876533222223558899999999999754
No 129
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.54 E-value=8.2e-15 Score=113.24 Aligned_cols=103 Identities=19% Similarity=0.419 Sum_probs=81.7
Q ss_pred cEEe-cccChhHHHhc-CCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCcc----c--cccCCc
Q psy7938 174 VKVL-VASNFDEIAFD-KSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVN----E--LEHTKI 242 (305)
Q Consensus 174 v~~l-~~~~f~~~v~~-~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~----~--~~~~~i 242 (305)
+..+ +.++|...+.+ .+++++|.||++||++|+.+.+.+ .++++.++ ++.++.+|++.+ . .+.|+|
T Consensus 13 f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v 89 (134)
T 2fwh_A 13 FTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA---DTVLLQANVTANDAQDVALLKHLNV 89 (134)
T ss_dssp CEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTC
T ss_pred cEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCC
Confidence 4434 44667666643 478999999999999999999999 89999884 499999999543 2 278999
Q ss_pred ccccEEEEEeCCCceE--EeeeCCCCHHHHHHHHHhcCC
Q psy7938 243 TSFPTLKLYAKDDNRV--IDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 243 ~~~Ptl~~f~~g~~~~--~~~~g~~~~~~l~~fi~~~~~ 279 (305)
.++||+++|+++++.. .++.|..+.+.|.++|++...
T Consensus 90 ~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~~ 128 (134)
T 2fwh_A 90 LGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP 128 (134)
T ss_dssp CSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC--
T ss_pred CCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcCc
Confidence 9999999996655534 589999999999999987654
No 130
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.54 E-value=1.6e-14 Score=111.19 Aligned_cols=88 Identities=20% Similarity=0.293 Sum_probs=75.5
Q ss_pred cCCCcEEEEEECCCChhhhhHHHHHH--HHHHHhCCCCceEEEEEeC---Ccccc--ccCCc---ccccEEEEEeCCCce
Q psy7938 188 DKSKHVLVEFYAPWCGHCKQLAPIYD--KLGEKFADRDDITIAKIDA---TVNEL--EHTKI---TSFPTLKLYAKDDNR 257 (305)
Q Consensus 188 ~~~~~~lv~f~~~~C~~C~~~~~~~~--~la~~~~~~~~v~~~~id~---~~~~~--~~~~i---~~~Ptl~~f~~g~~~ 257 (305)
..+++++|.||++||++|+.+.|.|. +++..+. .++.++.+|+ +.+.. ..|+| .++||+++|.++++.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~--~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~ 104 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIA--KHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKV 104 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHH--HHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhc--CCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCE
Confidence 46899999999999999999999999 9999884 3799999999 55543 89999 999999999666665
Q ss_pred EEeeeC-------CCCHHHHHHHHHhc
Q psy7938 258 VIDYNG-------ERVLEALSNFVESG 277 (305)
Q Consensus 258 ~~~~~g-------~~~~~~l~~fi~~~ 277 (305)
..++.| ..+.+.+.+||++.
T Consensus 105 ~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 105 RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEEecCCcccccccCCHHHHHHHHHHh
Confidence 778888 67899999999864
No 131
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.54 E-value=1.9e-16 Score=125.80 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=75.5
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+|+.||++||++|+.+.|.+.++ +.++.+++.|++||++ ++..++++||
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~l-------------------------a~~~~~~v~~~~vd~~--~~~~l~~~~~ 115 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAA-------------------------AATLAGQVRLAKIDTQ--AHPAVAGRHR 115 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHTTTCEEEEEETT--TSTHHHHHTT
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHccCCEEEEEEeCC--ccHHHHHHcC
Confidence 345778899999999999999888776 3444567999999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
|+ ++||+++|+.|+...++ .|..+.++|.+|+.+.+.
T Consensus 116 i~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 116 IQ--GIPAFILFHKGRELARA---AGARPASELVGFVRGKLG 152 (155)
T ss_dssp CC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHHC
T ss_pred CC--cCCEEEEEeCCeEEEEe---cCCCCHHHHHHHHHHHhc
Confidence 98 99999999877665556 367889999999999875
No 132
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.54 E-value=1e-15 Score=113.76 Aligned_cols=106 Identities=14% Similarity=0.150 Sum_probs=82.4
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
..+..++.++++.... ...+++.||++||++|+.+.|.+.+++..+.. ....+.|+.
T Consensus 5 ~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~----------------------~~~~~~~~~ 61 (111)
T 3uvt_A 5 STVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFP----------------------GLAGVKIAE 61 (111)
T ss_dssp CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCC----------------------C-CCEEEEE
T ss_pred CcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhc----------------------cCCceEEEE
Confidence 3456666555554444 45788899999999999998888887443311 114699999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
||++ ++..++++|+|. ++||+++|+.|+....+ .|..+.++|.+|+.+.
T Consensus 62 vd~~--~~~~l~~~~~v~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 62 VDCT--AERNICSKYSVR--GYPTLLLFRGGKKVSEH---SGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---CSCCSHHHHHHHHHHH
T ss_pred Eecc--ccHhHHHhcCCC--cccEEEEEeCCcEEEec---cCCcCHHHHHHHHHhc
Confidence 9999 888999999998 99999999888665566 3778999999999864
No 133
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.53 E-value=3.7e-16 Score=116.92 Aligned_cols=102 Identities=17% Similarity=0.171 Sum_probs=79.2
Q ss_pred eecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeC
Q psy7938 19 AKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINT 98 (305)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 98 (305)
++++.++++... +.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.||+
T Consensus 4 ~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~-------------------------~~~~~~~v~~~~vd~ 57 (112)
T 2voc_A 4 VKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEEL-------------------------DQEMGDKLKIVKIDV 57 (112)
T ss_dssp EECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHH-------------------------HHHHTTTCEEEEEET
T ss_pred EEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhCCCcEEEEEEC
Confidence 344444444333 456788999999999999998887666 233445799999999
Q ss_pred CchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 99 DEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 99 ~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+ ++.+++++|||. ++||+++|..|+...++ .|..+.++|.+|+.+.+.
T Consensus 58 ~--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 58 D--ENQETAGKYGVM--SIPTLLVLKDGEVVETS---VGFKPKEALQELVNKHLL 105 (112)
T ss_dssp T--TCCSHHHHTTCC--SBSEEEEEETTEEEEEE---ESCCCHHHHHHHHHTTSC
T ss_pred C--CCHHHHHHcCCC--cccEEEEEeCCEEEEEE---eCCCCHHHHHHHHHHHHH
Confidence 9 778899999998 99999999777655556 377899999999988754
No 134
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.53 E-value=8.8e-17 Score=125.37 Aligned_cols=94 Identities=14% Similarity=0.160 Sum_probs=78.3
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
++.+.+++.||++||++|+.+.|.+.++ +..+.+++.|+.||++ ++..++++|
T Consensus 22 ~~~~~vlv~F~a~wC~~C~~~~~~l~~l-------------------------~~~~~~~v~~~~vd~~--~~~~l~~~~ 74 (140)
T 3hz4_A 22 DSKKPVVVMFYSPACPYCKAMEPYFEEY-------------------------AKEYGSSAVFGRINIA--TNPWTAEKY 74 (140)
T ss_dssp TCSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHTTTSEEEEEETT--TCHHHHHHH
T ss_pred hCCCcEEEEEECCCChhHHHHHHHHHHH-------------------------HHHhCCceEEEEEECC--cCHhHHHHC
Confidence 3456788999999999999999888777 3344567999999999 889999999
Q ss_pred CCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcc
Q psy7938 111 GMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~ 156 (305)
+|. ++||+++|+.|..+..+ .|..+.++|.+|+.+.+....
T Consensus 75 ~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l~~~~ 115 (140)
T 3hz4_A 75 GVQ--GTPTFKFFCHGRPVWEQ---VGQIYPSILKNAVRDMLQHGE 115 (140)
T ss_dssp TCC--EESEEEEEETTEEEEEE---ESSCCHHHHHHHHHHHHHHHH
T ss_pred CCC--cCCEEEEEeCCcEEEEE---cCCCCHHHHHHHHHHHhcccc
Confidence 998 99999999888665566 367889999999999886433
No 135
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.53 E-value=3.3e-16 Score=115.48 Aligned_cols=101 Identities=12% Similarity=0.124 Sum_probs=78.8
Q ss_pred ceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEe
Q psy7938 18 MAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTIN 97 (305)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd 97 (305)
+.+++.++++... +.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.||
T Consensus 5 v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~v~ 58 (106)
T 3die_A 5 IVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEEL-------------------------AADYEGKADILKLD 58 (106)
T ss_dssp CEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEEE
T ss_pred eEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHH-------------------------HHHhcCCcEEEEEE
Confidence 3344444444333 456788999999999999998888777 34445679999999
Q ss_pred CCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 98 TDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 98 ~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
++ ++..++++|+|. ++||+++|+.|+...++ .|..+.+++.+++.+.
T Consensus 59 ~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~---~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 59 VD--ENPSTAAKYEVM--SIPTLIVFKDGQPVDKV---VGFQPKENLAEVLDKH 105 (106)
T ss_dssp TT--TCHHHHHHTTCC--SBSEEEEEETTEEEEEE---ESCCCHHHHHHHHHTT
T ss_pred CC--cCHHHHHhCCCc--ccCEEEEEeCCeEEEEE---eCCCCHHHHHHHHHHh
Confidence 99 889999999998 99999999977665566 3678899999998754
No 136
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.53 E-value=1.1e-15 Score=133.34 Aligned_cols=105 Identities=12% Similarity=0.241 Sum_probs=84.4
Q ss_pred CceecCCCCCCCChh--HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 17 DMAKYKPATPEINVD--TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~--~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
.++.++.++|+..+. ..++++++||++||+||+.+.|.+.++ ..++++++.|+
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~-------------------------~~~~~~~~~~~ 62 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESL-------------------------AAQYNGQFILA 62 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHH-------------------------HHHHTSSSEEE
T ss_pred ccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHH-------------------------HHHcCCCeEEE
Confidence 455565555553332 257889999999999999999988877 34445679999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+||++ +++.++++|||. ++||+++|+.|..+.++. |..+.+.+.+++...+.
T Consensus 63 ~vd~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~~---g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 63 KLDCD--AEQMIAAQFGLR--AIPTVYLFQNGQPVDGFQ---GPQPEEAIRALLDXVLP 114 (287)
T ss_dssp EEETT--TCHHHHHTTTCC--SSSEEEEEETTEEEEEEE---SCCCHHHHHHHHHHHSC
T ss_pred EEeCc--cCHHHHHHcCCC--CCCeEEEEECCEEEEEee---CCCCHHHHHHHHHHHcC
Confidence 99999 889999999998 999999998886666663 67889999999998863
No 137
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.52 E-value=8.6e-16 Score=117.77 Aligned_cols=89 Identities=11% Similarity=0.178 Sum_probs=73.8
Q ss_pred hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHH
Q psy7938 30 VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEF 109 (305)
Q Consensus 30 ~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~ 109 (305)
..+.+.+++.||++||++|+.+.|.+.++ ...+++++.|+.||++ ++..++++
T Consensus 39 ~~~~k~vlv~F~a~wC~~C~~~~p~l~~~-------------------------~~~~~~~v~~~~vd~d--~~~~l~~~ 91 (128)
T 3ul3_B 39 NMKNTVIVLYFFAKWCQACTMQSTEMDKL-------------------------QKYYGKRIYLLKVDLD--KNESLARK 91 (128)
T ss_dssp TSCCSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHGGGEEEEEEEGG--GCHHHHHH
T ss_pred HccCCEEEEEEECCCCHHHHHHhHHHHHH-------------------------HHHhcCCeEEEEEECC--CCHHHHHH
Confidence 34567889999999999999998888776 2333467999999999 88999999
Q ss_pred cCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 110 FGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
|||. ++||+++|+.|+...++ .|..+.++|.+++.+
T Consensus 92 ~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 92 FSVK--SLPTIILLKNKTMLARK---DHFVSSNDLIALIKK 127 (128)
T ss_dssp TTCC--SSSEEEEEETTEEEEEE---SSCCCHHHHHHHHTT
T ss_pred cCCC--CcCEEEEEECCEEEEEe---cCCCCHHHHHHHHHh
Confidence 9998 99999999877665556 377899999998864
No 138
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.52 E-value=6.4e-14 Score=98.86 Aligned_cols=80 Identities=21% Similarity=0.421 Sum_probs=70.3
Q ss_pred CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHH
Q psy7938 191 KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLE 268 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~ 268 (305)
..+++.||++||++|+.+.|.++++++.+. +++.++.+|++.+.. +++++.++||+++ +| + . ++.|..+.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G-~-~-~~~G~~~~~ 75 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMP--DAVEVEYINVMENPQKAMEYGIMAVPTIVI--NG-D-V-EFIGAPTKE 75 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCS--SSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TT-E-E-ECCSSSSSH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcC--CceEEEEEECCCCHHHHHHCCCcccCEEEE--CC-E-E-eeecCCCHH
Confidence 468999999999999999999999999995 479999999987764 8999999999999 44 4 4 889998999
Q ss_pred HHHHHHHhc
Q psy7938 269 ALSNFVESG 277 (305)
Q Consensus 269 ~l~~fi~~~ 277 (305)
.|.++|++.
T Consensus 76 ~l~~~l~~~ 84 (85)
T 1fo5_A 76 ALVEAIKKR 84 (85)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999864
No 139
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=8.2e-16 Score=117.42 Aligned_cols=107 Identities=10% Similarity=0.121 Sum_probs=80.3
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcC-ceEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGN-LKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~ 94 (305)
..++.++.++|+...++ ++++.||++||++|+.+.|.+.+++..+ + ..+.|+
T Consensus 7 ~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~-------------------------~~~~v~~~ 59 (126)
T 1x5e_A 7 GNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWG-------------------------EDLEVNIA 59 (126)
T ss_dssp CSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHH-------------------------GGGTCEEE
T ss_pred CccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHh-------------------------ccCCeEEE
Confidence 34555554444422222 2889999999999999988887773322 2 268999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCccc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLK 157 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~ 157 (305)
.||++ ++..++++|+|. ++||+++|+.|. +.++ .|..+.++|.+|+.+.+....+
T Consensus 60 ~vd~~--~~~~~~~~~~v~--~~Pt~~~~~~G~-~~~~---~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 60 KVDVT--EQPGLSGRFIIN--ALPTIYHCKDGE-FRRY---QGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp EEETT--TCHHHHHHTTCC--SSSEEEEEETTE-EEEC---CSCCCHHHHHHHHHTCGGGGSC
T ss_pred EEECc--CCHHHHHHcCCc--ccCEEEEEeCCe-EEEe---ecCCCHHHHHHHHHHHhhccCC
Confidence 99999 888999999998 999999997765 3455 3778999999999988754433
No 140
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.52 E-value=6.6e-16 Score=118.56 Aligned_cols=106 Identities=14% Similarity=0.181 Sum_probs=83.4
Q ss_pred ccCceecCCCCCCC-ChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 15 EEDMAKYKPATPEI-NVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 15 ~~~~~~~~~~~~~~-~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
.+.++.++.++|+. ..++.+.+++.||++||++|+.+.|.+.++ +..+.+++.|
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~~~~v~~ 75 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEI-------------------------ADEYQGKLTV 75 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHH-------------------------HHHTTTTEEE
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHH-------------------------HHHhcCCeEE
Confidence 34567776666552 234567889999999999999998888776 3444567999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
+.||++ ++..++++|+|. ++||+++|..|+....+ .|..+.++|.+|+.+.+
T Consensus 76 ~~vd~~--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 76 AKLNID--QNPGTAPKYGIR--GIPTLLLFKNGEVAATK---VGALSKGQLKEFLDANL 127 (128)
T ss_dssp EEEETT--TCCTTSGGGTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHH
T ss_pred EEEECC--CCHHHHHHcCCC--ccCEEEEEeCCEEEEEE---cCCCCHHHHHHHHHHhh
Confidence 999999 778899999998 99999999777654555 36788999999998875
No 141
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.52 E-value=3.8e-15 Score=113.65 Aligned_cols=93 Identities=4% Similarity=-0.046 Sum_probs=75.5
Q ss_pred hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEe--CCchhHHHHH
Q psy7938 30 VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTIN--TDEEDHQKIL 107 (305)
Q Consensus 30 ~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd--~~~~~~~~l~ 107 (305)
..+.+.+++.||++||++|+.+.|.+.++ ...+++.+.|+.|| ++ ++..++
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~-------------------------~~~~~~~v~~~~v~~~~d--~~~~~~ 75 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYV-------------------------SKEREGKFNIYYARLEEE--KNIDLA 75 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHH-------------------------HHHSSSSCEEEEEETTSS--HHHHHH
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHH-------------------------HHHhcCCeEEEEEeCCCC--chHHHH
Confidence 34456889999999999999888877666 34444679999999 88 889999
Q ss_pred HHcCCCCCCCCeEEEEe-cCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 108 EFFGMSKDEVPSLRLIR-LEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 108 ~~~~I~~~~~Ptl~~~~-~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
++|||. ++||+++|+ .|+...++ .|..+.++|.+++.+.+..
T Consensus 76 ~~~~v~--~~Pt~~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 76 YKYDAN--IVPTTVFLDKEGNKFYVH---QGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp HHTTCC--SSSEEEEECTTCCEEEEE---ESCCCHHHHHHHHHHHCCC
T ss_pred HHcCCc--ceeEEEEECCCCCEEEEe---cCCCCHHHHHHHHHHHhcc
Confidence 999998 999999999 55544455 3678899999999998653
No 142
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.51 E-value=2.1e-14 Score=115.68 Aligned_cols=101 Identities=14% Similarity=0.197 Sum_probs=79.3
Q ss_pred EEecccChhHHHh---cCCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCccc------------
Q psy7938 175 KVLVASNFDEIAF---DKSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVNE------------ 236 (305)
Q Consensus 175 ~~l~~~~f~~~v~---~~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~~------------ 236 (305)
..++..+|.+.+. ..+++++|+||++||++|+.+.+.+ .++.+.+.. ++.++.+|++.+.
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~--~~~~v~v~~d~~~~~~~~~~~~~~~ 106 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN--DYVLITLYVDNKTPLTEPVKIMENG 106 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH--HCEEEEEETTCCCEEEEEEEEEETT
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC--CEEEEEEecCcccccchhhhhhhcc
Confidence 3445577777663 5689999999999999999985544 566666632 6899999988665
Q ss_pred ----------------cccCCcccccEEEEEeCCCceEEeeeCCCC-HHHHHHHHHhc
Q psy7938 237 ----------------LEHTKITSFPTLKLYAKDDNRVIDYNGERV-LEALSNFVESG 277 (305)
Q Consensus 237 ----------------~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~-~~~l~~fi~~~ 277 (305)
...|+|.++||+++|+++++...++.|..+ .+.+.+||++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 107 TERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 456899999999999766665777889888 99999999864
No 143
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.51 E-value=4.7e-16 Score=114.63 Aligned_cols=101 Identities=13% Similarity=0.161 Sum_probs=76.6
Q ss_pred eecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeC
Q psy7938 19 AKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINT 98 (305)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 98 (305)
++++.++++...++.+.+++.||++||++|+.+.|.+.++ ...+.+++.++.+|+
T Consensus 3 ~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~v~~~~v~~ 57 (105)
T 1nsw_A 3 MTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEF-------------------------AEAHADKVTVAKLNV 57 (105)
T ss_dssp EEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHSTTTCEEEEEET
T ss_pred eeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhcCCcEEEEEEC
Confidence 3444444442233446789999999999999988887666 344456699999999
Q ss_pred CchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 99 DEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 99 ~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+ ++.+++++|||. ++||+++|+.|.....+. |..+.++|.+++.+.
T Consensus 58 ~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~~---G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 58 D--ENPETTSQFGIM--SIPTLILFKGGRPVKQLI---GYQPKEQLEAQLADV 103 (105)
T ss_dssp T--TCHHHHHHTTCC--SSSEEEEEETTEEEEEEE---SCCCHHHHHHHTTTT
T ss_pred c--CCHHHHHHcCCc--cccEEEEEeCCeEEEEEe---cCCCHHHHHHHHHHH
Confidence 9 888999999998 999999997776545553 677888898887654
No 144
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.51 E-value=1.9e-15 Score=117.70 Aligned_cols=90 Identities=13% Similarity=0.262 Sum_probs=75.4
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
..+.+++.||++||++|+.+.|.+.++ ...+.+++.|+.||++ ++..++++||
T Consensus 50 ~~k~vlv~f~a~wC~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~v~~~--~~~~~~~~~~ 102 (141)
T 3hxs_A 50 GDKPAIVDFYADWCGPCKMVAPILEEL-------------------------SKEYAGKIYIYKVNVD--KEPELARDFG 102 (141)
T ss_dssp CSSCEEEEEECTTCTTHHHHHHHHHHH-------------------------HHHTTTTCEEEEEETT--TCHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhcCceEEEEEECC--CCHHHHHHcC
Confidence 357889999999999999998888777 3444567999999999 8899999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
|. ++||+++|+.++....+ .|..+.++|.+++.+.+.
T Consensus 103 v~--~~Pt~~~~~~~g~~~~~---~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 103 IQ--SIPTIWFVPMKGEPQVN---MGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp CC--SSSEEEEECSSSCCEEE---ESCCCHHHHHHHHHHTTC
T ss_pred CC--CcCEEEEEeCCCCEEEE---eCCCCHHHHHHHHHHHHc
Confidence 98 99999999766554455 377899999999998764
No 145
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.51 E-value=2.6e-15 Score=116.84 Aligned_cols=107 Identities=16% Similarity=0.198 Sum_probs=75.0
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
..+.+++.++++..+.....+++.||++||++|+.+.|.+.++ +..+.+++.|+.
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l-------------------------~~~~~~~v~~~~ 87 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEEL-------------------------ARDHAGRLKVVK 87 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTEEEEE
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHccCceEEEE
Confidence 4455666556654432222289999999999999998888776 344456799999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
||++ ++..++++|+|. ++||+++|+.|.....+. |..+.++|.+|+.+.+.+
T Consensus 88 vd~~--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~~---G~~~~~~l~~~i~~~l~~ 139 (140)
T 1v98_A 88 VNVD--EHPGLAARYGVR--SVPTLVLFRRGAPVATWV---GASPRRVLEERLRPYLEG 139 (140)
T ss_dssp EETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEEE---SCCCHHHHHHHHHHHHTC
T ss_pred EECC--CCHHHHHHCCCC--ccCEEEEEeCCcEEEEEe---CCCCHHHHHHHHHHHHcc
Confidence 9999 888999999998 999999998776555553 678899999999998764
No 146
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.51 E-value=1.2e-15 Score=127.18 Aligned_cols=105 Identities=13% Similarity=0.185 Sum_probs=82.2
Q ss_pred ceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEe
Q psy7938 18 MAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTIN 97 (305)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd 97 (305)
+..++..+++..+.+.+.+++.||++||++|+.+.|.+.++ +..+++.+.|+.||
T Consensus 99 v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l-------------------------~~~~~~~v~~~~vd 153 (210)
T 3apq_A 99 IITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREF-------------------------AKEVDGLLRIGAVN 153 (210)
T ss_dssp SEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTBTTBEEEEEE
T ss_pred eEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHH-------------------------HHHhcCceEEEEEE
Confidence 34443333333334456788899999999999999888777 33445679999999
Q ss_pred CCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 98 TDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 98 ~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
++ ++..+|++|||. ++||+++|..|..+..+ .|..+.++|.+|+.+.+..
T Consensus 154 ~~--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 154 CG--DDRMLCRMKGVN--SYPSLFIFRSGMAAVKY---NGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp TT--TCHHHHHHTTCC--SSSEEEEECTTSCCEEC---CSCCCHHHHHHHHHHHHHC
T ss_pred CC--ccHHHHHHcCCC--cCCeEEEEECCCceeEe---cCCCCHHHHHHHHHHhCcc
Confidence 99 888999999998 99999999877665666 3778999999999999764
No 147
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.51 E-value=5.2e-14 Score=108.60 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=86.6
Q ss_pred CcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCccc--ccEE
Q psy7938 173 AVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITS--FPTL 248 (305)
Q Consensus 173 ~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~--~Ptl 248 (305)
.|.+++..+|.+.+ +++.+++|+||++ |++|+.+.|.++++|+.++ +++.|+.+|.+.+.. ..|+|++ +||+
T Consensus 7 lv~~~t~~~f~~~~-~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~--gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 7 LIGEIGPETYSDYM-SAGIPLAYIFAET-AEERKELSDKLKPIAEAQR--GVINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CSEECCHHHHHHHH-HTTSCEEEEECSC-SSSHHHHHHHHHHHHHSST--TTSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred ceeccChHHHHHHh-cCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhC--CeEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 37888999999875 6778999999999 8999999999999999995 479999999998765 8999999 9999
Q ss_pred EEEeC-CCceEEeee--CCCCHHHHHHHHHhcC
Q psy7938 249 KLYAK-DDNRVIDYN--GERVLEALSNFVESGG 278 (305)
Q Consensus 249 ~~f~~-g~~~~~~~~--g~~~~~~l~~fi~~~~ 278 (305)
++|+. ++. ...+. |..+.+.|.+||++..
T Consensus 83 ~i~~~~~g~-~~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 83 AIQEVAKNQ-KFPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp EEECTTTCC-BCCCCSSSCCCHHHHHHHHHHHH
T ss_pred EEEecCcCc-ccCCCCccccCHHHHHHHHHHHH
Confidence 99996 333 24555 9999999999998754
No 148
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.51 E-value=1.1e-14 Score=108.65 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=66.1
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCC---CceEEEEEeCCccc---c-ccCCcccccEEEEEeCCCceEEee
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADR---DDITIAKIDATVNE---L-EHTKITSFPTLKLYAKDDNRVIDY 261 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~---~~v~~~~id~~~~~---~-~~~~i~~~Ptl~~f~~g~~~~~~~ 261 (305)
+.+.++|+||++||++|+.+.+.+ +..+... ..+.+.++|.+.+. . ..++|.++||+++|++|+. +.++
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i---~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~e-v~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEI---APQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVE-SGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHT---TTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEE-EEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHHH---HhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEE-Eeee
Confidence 456899999999999999998643 3333211 12667778887763 2 7889999999999996654 8899
Q ss_pred eCCCCHHHHHHHHHhcC
Q psy7938 262 NGERVLEALSNFVESGG 278 (305)
Q Consensus 262 ~g~~~~~~l~~fi~~~~ 278 (305)
.|....+.|.+||+...
T Consensus 93 ~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLI 109 (116)
T ss_dssp ECCCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH
Confidence 99999999999998753
No 149
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.51 E-value=2.3e-15 Score=113.35 Aligned_cols=86 Identities=16% Similarity=0.288 Sum_probs=71.1
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
..+.+++.||++||++|+.+.|.+.++ +..+.+ +.|+.||++ ++.+++++||
T Consensus 30 ~~k~vlv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~~~-v~~~~vd~d--~~~~l~~~~~ 81 (116)
T 3qfa_C 30 GDKLVVVDFSATWCGPSKMIKPFFHSL-------------------------SEKYSN-VIFLEVDVD--DCQDVASECE 81 (116)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HTTCTT-SEEEEEETT--TTHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHCCC-CEEEEEECC--CCHHHHHHcC
Confidence 345677789999999999999888777 333345 899999999 8899999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++|+.|+.+.++. |. +.+.|.+++.+.
T Consensus 82 v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 82 VK--SMPTFQFFKKGQKVGEFS---GA-NKEKLEATINEL 115 (116)
T ss_dssp CC--SSSEEEEESSSSEEEEEE---SC-CHHHHHHHHHHH
T ss_pred Cc--cccEEEEEeCCeEEEEEc---CC-CHHHHHHHHHHh
Confidence 98 999999998776656663 55 899999999875
No 150
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.50 E-value=1.9e-15 Score=110.73 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=79.2
Q ss_pred ecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCC
Q psy7938 20 KYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTD 99 (305)
Q Consensus 20 ~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 99 (305)
+++.++++...++.+.+++.||++||++|+.+.|.+.++ ...+.+ +.|+.+|++
T Consensus 3 ~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~-~~~~~v~~~ 56 (104)
T 2e0q_A 3 HLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEEL-------------------------AEDYPQ-VGFGKLNSD 56 (104)
T ss_dssp ECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCTT-SEEEEEETT
T ss_pred ecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHH-------------------------HHHcCC-ceEEEEECC
Confidence 344444444445566789999999999999888877666 334445 999999999
Q ss_pred chhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 100 EEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 100 ~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
++.+++++|+|. ++||+++|+.|+....+ .|..+.+++.+|+.+.++
T Consensus 57 --~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 57 --ENPDIAARYGVM--SLPTVIFFKDGEPVDEI---IGAVPREEIEIRIKNLLG 103 (104)
T ss_dssp --TCHHHHHHTTCC--SSCEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHHT
T ss_pred --CCHHHHHhCCcc--ccCEEEEEECCeEhhhc---cCCCCHHHHHHHHHHHhc
Confidence 888999999998 99999999877654555 367889999999998763
No 151
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.50 E-value=1.9e-15 Score=119.11 Aligned_cols=90 Identities=11% Similarity=0.103 Sum_probs=75.3
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.++++++|||+||++|+.+.|.+.++ +..+++++.|+.||++ ++.+++++|+|
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l-------------------------~~~~~~~~~~~~vd~d--~~~~l~~~~~v 75 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKT-------------------------SSDLSKMAAIYLVDVD--QTAVYTQYFDI 75 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHH-------------------------HTTTTTTEEEEEEETT--TCCHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHccCceEEEEEECC--cCHHHHHHcCC
Confidence 46788899999999999999988877 3344566999999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCc---------eeccCCCC-CCCHHHHHHHHHHHHcC
Q psy7938 113 SKDEVPSLRLIRLEEDM---------AKYKPATP-EISVDTVRSFVTEFLAG 154 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~---------~~~~~~~~-~~~~~~l~~fv~~~~~~ 154 (305)
. ++||+++|+.|+.+ .++ .| ..+.++|.++++..+.+
T Consensus 76 ~--~~Pt~~~~~~G~~v~~~~g~~~~~~~---~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 76 S--YIPSTVFFFNGQHMKVDYGSPDHTKF---VGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp C--SSSEEEEEETTEEEEEECSSSCCSCE---ESCCSSHHHHHHHHHHHHHH
T ss_pred C--ccCeEEEEECCeEEEeecCCCCCCeE---eeecCCHHHHHHHHHHHHHH
Confidence 8 99999999988665 344 25 67889999999998754
No 152
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.50 E-value=1e-15 Score=113.23 Aligned_cols=104 Identities=9% Similarity=0.096 Sum_probs=80.9
Q ss_pred ceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEe
Q psy7938 18 MAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTIN 97 (305)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd 97 (305)
+.+++.++++...++.+.+++.||++||++|+.+.|.+.++ ...+.+++.|+.||
T Consensus 3 v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~v~ 57 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEI-------------------------AKEYEGKLLVAKLD 57 (109)
T ss_dssp CEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTBTTBEEEEEE
T ss_pred ceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHH-------------------------HHHhhCceEEEEEE
Confidence 45555555553345567889999999999999888877666 33444579999999
Q ss_pred CCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 98 TDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 98 ~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
++ ++..++++|+|. ++||+++|..|+....+ .|..+.++|.+|+.+.+.
T Consensus 58 ~~--~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 58 VD--ENPKTAMRYRVM--SIPTVILFKDGQPVEVL---VGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp TT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHTTC-
T ss_pred CC--CCHhHHHhCCCC--cCCEEEEEeCCcEeeeE---eCCCCHHHHHHHHHHHhh
Confidence 99 888999999998 99999999777654555 367789999999987753
No 153
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.50 E-value=1.5e-15 Score=113.66 Aligned_cols=104 Identities=18% Similarity=0.188 Sum_probs=80.3
Q ss_pred ceecCCCCCCCC-hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEE
Q psy7938 18 MAKYKPATPEIN-VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTI 96 (305)
Q Consensus 18 ~~~~~~~~~~~~-~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v 96 (305)
+..++.++++.. ..+.+.+++.||++||++|+.+.|.+.++ ...+++++.|+.|
T Consensus 9 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~v~~~~v 63 (115)
T 1thx_A 9 VITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLA-------------------------ANTYSDRLKVVKL 63 (115)
T ss_dssp EEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHH-------------------------HHHTTTTCEEEEE
T ss_pred eEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHH-------------------------HHHhCCcEEEEEE
Confidence 444443343321 23456788999999999999988887766 3444567999999
Q ss_pred eCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 97 NTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 97 d~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
|++ ++..++++|||. ++||+++|..|.....+ .|..+.+++.+|+.+.+.
T Consensus 64 ~~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~---~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 64 EID--PNPTTVKKYKVE--GVPALRLVKGEQILDST---EGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EST--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHHC
T ss_pred EcC--CCHHHHHHcCCC--ceeEEEEEcCCEEEEEe---cCCCCHHHHHHHHHHHhc
Confidence 999 888999999998 99999999777654555 367889999999998875
No 154
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.50 E-value=1.9e-15 Score=112.74 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=79.9
Q ss_pred ceecCCCCCCC-ChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEE
Q psy7938 18 MAKYKPATPEI-NVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTI 96 (305)
Q Consensus 18 ~~~~~~~~~~~-~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v 96 (305)
+..++.+++.. ..++.+.+++.||++||++|+.+.|.+.++ ...+++++.|+.|
T Consensus 7 v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~v 61 (112)
T 1t00_A 7 LKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAI-------------------------AAEYGDKIEIVKL 61 (112)
T ss_dssp CEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEE
T ss_pred EEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHH-------------------------HHHhcCCeEEEEE
Confidence 44454444432 123456789999999999999888877666 3444467999999
Q ss_pred eCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 97 NTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 97 d~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
|++ ++..++++|||. ++||+++|+.|+...++ .|..+.+++.+++.+.++
T Consensus 62 ~~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l~ 111 (112)
T 1t00_A 62 NID--ENPGTAAKYGVM--SIPTLNVYQGGEVAKTI---VGAKPKAAIVRDLEDFIA 111 (112)
T ss_dssp ETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHTHHHHC
T ss_pred EcC--CCHHHHHhCCCC--cccEEEEEeCCEEEEEE---eCCCCHHHHHHHHHHHhh
Confidence 999 888999999998 99999999877655555 367889999999998764
No 155
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.50 E-value=5.1e-16 Score=117.77 Aligned_cols=93 Identities=14% Similarity=0.066 Sum_probs=74.8
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +..+.+.+.|+.||++ ++.+++++|+
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~vd~~--~~~~~~~~~~ 72 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELL-------------------------ARMIKGKVRAGKVDCQ--AYPQTCQKAG 72 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHTTTCEEEEEETT--TCHHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhcCCeEEEEEeCc--CCHHHHHHcC
Confidence 346788999999999999998888776 3334457999999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCC-CCCCCHHHHHHHHHHHHc
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPA-TPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~-~~~~~~~~l~~fv~~~~~ 153 (305)
|. ++||+++|+.|+...++.+. .|.++.++|.+|+.+.+.
T Consensus 73 v~--~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 73 IK--AYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp CC--SSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CC--ccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 98 99999999877654455321 134799999999999875
No 156
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.49 E-value=3.7e-15 Score=117.90 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=77.1
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+|+.||++||++|+.+.|.+.++ ...+ +.+.|+.||++ ++..++++|||
T Consensus 32 ~~~vvv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~-~~v~~~~vd~~--~~~~l~~~~~v 83 (153)
T 2wz9_A 32 KSLLVVHFWAPWAPQCAQMNEVMAEL-------------------------AKEL-PQVSFVKLEAE--GVPEVSEKYEI 83 (153)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHC-TTSEEEEEETT--TSHHHHHHTTC
T ss_pred CCeEEEEEECCCCHhHHHHHHHHHHH-------------------------HHHc-CCeEEEEEECC--CCHHHHHHcCC
Confidence 46788899999999999998887776 2333 45899999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHh
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAF 187 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~ 187 (305)
. ++||+++|+.|+...++. | .+.++|.+++.+.+..... + ....+..++..+|+++..
T Consensus 84 ~--~~Pt~~~~~~G~~~~~~~---G-~~~~~l~~~i~~~l~~~~~------~-----~~~~~~~l~~~~f~~~~~ 141 (153)
T 2wz9_A 84 S--SVPTFLFFKNSQKIDRLD---G-AHAPELTKKVQRHASSGSF------L-----PSAKVKVDTDPNSSSVDK 141 (153)
T ss_dssp C--SSSEEEEEETTEEEEEEE---S-SCHHHHHHHHHHHSCTTSS------C-----SCCCCCCC----------
T ss_pred C--CCCEEEEEECCEEEEEEe---C-CCHHHHHHHHHHHhccccC------C-----CccccccCCCCChhhHHH
Confidence 8 999999999776545552 3 5778899999999754322 1 122377788888888764
No 157
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.49 E-value=7.3e-14 Score=98.56 Aligned_cols=80 Identities=21% Similarity=0.351 Sum_probs=69.4
Q ss_pred cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHHH
Q psy7938 192 HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLEA 269 (305)
Q Consensus 192 ~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~ 269 (305)
..++.||++||++|+.+.|.++++++.+. +++.++.+|++.+.. +++++.++||+++ + ++ . ++.|..+.+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~-G~-~-~~~G~~~~~~ 75 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG--DKIDVEKIDIMVDREKAIEYGLMAVPAIAI--N-GV-V-RFVGAPSREE 75 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC--SSCCEEEECTTTCGGGGGGTCSSCSSEEEE--T-TT-E-EEECSSCCHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHhCCceeeCEEEE--C-CE-E-EEccCCCHHH
Confidence 46899999999999999999999999995 368899999987764 8999999999999 4 44 3 8899989999
Q ss_pred HHHHHHhcC
Q psy7938 270 LSNFVESGG 278 (305)
Q Consensus 270 l~~fi~~~~ 278 (305)
|.++|++..
T Consensus 76 l~~~l~~~l 84 (85)
T 1nho_A 76 LFEAINDEM 84 (85)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHh
Confidence 999998753
No 158
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.49 E-value=1.2e-15 Score=112.60 Aligned_cols=103 Identities=14% Similarity=0.139 Sum_probs=78.8
Q ss_pred CceecCCCCCCCC-hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEE
Q psy7938 17 DMAKYKPATPEIN-VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVT 95 (305)
Q Consensus 17 ~~~~~~~~~~~~~-~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 95 (305)
+++.++.++++.. .++.+++++.||++||++|+.+.|.+.++ ...+.+.+.|+.
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~ 57 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEI-------------------------GKEFAGKVTVAK 57 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHHTTSEEEEE
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHH-------------------------HHHhCCcEEEEE
Confidence 3445544444422 24457889999999999999888877666 233446799999
Q ss_pred EeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 96 INTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 96 vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+|++ ++..++++|||. ++||+++|..|.....+ .|..+.++|.+|+.+.
T Consensus 58 v~~~--~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 58 VNID--DNPETPNAYQVR--SIPTLMLVRDGKVIDKK---VGALPKSQLKAWVESA 106 (107)
T ss_dssp EETT--TCCHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHT
T ss_pred EECC--CCHHHHHhcCCC--ccCEEEEEeCCEEEEEe---cCCCCHHHHHHHHHhc
Confidence 9999 788999999998 99999999777655555 3678899999998764
No 159
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.49 E-value=2.3e-15 Score=113.93 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=79.8
Q ss_pred cCceecCCCCCCCCh-hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 16 EDMAKYKPATPEINV-DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
..+..++.++|+..+ .+.+.+++.|||+||++|+.+.|.+.+++..++. ......+.|+
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~--------------------~~~~~~v~~~ 66 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAK--------------------SEFKDRVVIA 66 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTT--------------------SSCTTSSEEE
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhh--------------------cccCCceEEE
Confidence 456777777777553 5668899999999999999999888777333210 0001268999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC--ceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED--MAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~--~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
.||++ ++. +++ +|. ++||+++|+.++. ...+ .|.++.++|.+|+.+.+.
T Consensus 67 ~vd~~--~~~-~~~--~v~--~~Pt~~~~~~~~~~~~~~~---~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 67 KVDAT--AND-VPD--EIQ--GFPTIKLYPAGAKGQPVTY---SGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp EEETT--TSC-CSS--CCS--SSSEEEEECSSCTTSCCCC---CCCSCHHHHHHHHHHTSS
T ss_pred EEECc--ccc-ccc--ccC--cCCeEEEEeCcCCCCceEe---cCCCCHHHHHHHHHhccC
Confidence 99999 433 555 887 9999999998754 3444 377899999999998754
No 160
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.49 E-value=1e-14 Score=123.93 Aligned_cols=153 Identities=11% Similarity=0.143 Sum_probs=109.5
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhh--cCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEE
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFL--AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVL 92 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~--a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 92 (305)
...++.++..+|+..+.+...++|+|| ||||+ +.|.|.+++..+ ..+.+.|.
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~----------------------~~~~~~v~ 68 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSA----------------------HKATKDLL 68 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHH----------------------HHHCSSEE
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHH----------------------hccCCCeE
Confidence 345777777777755556678999999 99999 788888884443 11135799
Q ss_pred EEEEeCCc---hhHHHHHHHcCCCCCCCCeEEEEecCcC--ceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCC
Q psy7938 93 FVTINTDE---EDHQKILEFFGMSKDEVPSLRLIRLEED--MAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPE 167 (305)
Q Consensus 93 ~~~vd~~~---~~~~~l~~~~~I~~~~~Ptl~~~~~~~~--~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~ 167 (305)
|++|||+. .++.++|++|||..+++||+++|. |.. ...|... |.++.++|.+|+.+..... ...+.
T Consensus 69 ~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~-G~~~~~~L~~fi~~~~~~~-------~~~~g 139 (248)
T 2c0g_A 69 IATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSH-VDVTLDNLKAFVSANTPLY-------IGRDG 139 (248)
T ss_dssp EEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTT-SCCCHHHHHHHHHHHSSCC-------CCCTT
T ss_pred EEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeeccc-CCCCHHHHHHHHHHhhccc-------cCCCC
Confidence 99999993 118999999999544799999999 762 3444112 7899999999999986411 01111
Q ss_pred ccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhC
Q psy7938 168 DWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFA 220 (305)
Q Consensus 168 ~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~ 220 (305)
. -..++.++. .|.+.||..|..+....++++..+.
T Consensus 140 ~----------i~~~d~l~~--------~f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 140 C----------IKEFNEVLK--------NYANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp C----------CHHHHHHHT--------TGGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred c----------hHHHHHHHH--------HHhcccchhHHHHHHHHHHHHHHcc
Confidence 1 144555552 2778899999999999999888773
No 161
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.48 E-value=1.3e-15 Score=116.06 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=77.2
Q ss_pred CceecCCCCCC-CChhHHHHHhhhhhcCccc--------------ccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 17 DMAKYKPATPE-INVDTVRSFVTEFLAGNLK--------------HSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~iv~f~a~wc~--------------~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
.+++++.++|+ ...++.+++++.||++||+ +|+.+.|.+.+++
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~---------------------- 61 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIA---------------------- 61 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----------------------
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHH----------------------
Confidence 45566555554 2234567889999999999 9999988877762
Q ss_pred HHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 82 TEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
.++.+++.|++||++ ++..++++|||. ++||+++|..|....++ .|..+.++|.+++.+.
T Consensus 62 ---~~~~~~~~~~~vd~d--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 62 ---DEYQGKLTVAKLNID--QNPGTAPKYGIR--GIPTLLLFKNGEVAATK---VGALSKGQLKEFLDAN 121 (123)
T ss_dssp ---------CEEEEEETT--SCTTTGGGGTCC--BSSEEEEEESSSEEEEE---ESCCCHHHHHHHHTTT
T ss_pred ---HHhcCCeEEEEEECC--CCHHHHHHcCCC--ccCEEEEEECCEEEEEE---eCCCCHHHHHHHHHHH
Confidence 333457999999999 778999999998 99999999877665556 3678889999998764
No 162
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.48 E-value=9.1e-16 Score=118.85 Aligned_cols=106 Identities=10% Similarity=0.033 Sum_probs=80.1
Q ss_pred ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 15 EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
+..+..++.++++...++ ++++.|||+||++|+.+.|.+.++ +.+++ +.|+
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~~--v~~~ 65 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQA-------------------------SKEVD--VPIV 65 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHH-------------------------HTTCC--SCEE
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHH-------------------------HHHCC--CEEE
Confidence 445555644444433343 788999999999999998888777 23333 8899
Q ss_pred EEeCCc-------hhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 95 TINTDE-------EDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 95 ~vd~~~-------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
.||++. .++.+++++|||. ++||+++|+.|+...++ .|..+.+.+..++++...+
T Consensus 66 ~vd~~~~~~~~~~d~~~~l~~~~~v~--~~Pt~~~~~~G~~v~~~---~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 66 MFIWGSLIGERELSAARLEMNKAGVE--GTPTLVFYKEGRIVDKL---VGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHC--
T ss_pred EEECCCchhhhhhhhhHHHHHHcCCc--eeCeEEEEcCCEEEEEE---eCCCCHHHHHHHHHHHhCC
Confidence 999921 1889999999998 99999999988765666 3778899999999998754
No 163
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.47 E-value=5.5e-15 Score=115.37 Aligned_cols=105 Identities=7% Similarity=-0.015 Sum_probs=73.0
Q ss_pred CceecCCCCCCCChhHHHHHhhhhhcCc--ccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEE--
Q psy7938 17 DMAKYKPATPEINVDTVRSFVTEFLAGN--LKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVL-- 92 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~iv~f~a~w--c~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 92 (305)
.+..++.++|+..+.+....++.|+++| |++|+.+.|.+.++ +.++ +++.
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~l-------------------------a~~~-~~v~~~ 71 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAEL-------------------------LREF-PQFDWQ 71 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHH-------------------------HHTC-TTSCCE
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHH-------------------------HHHh-ccccee
Confidence 4556666667655554445778899988 99999999999888 4445 6677
Q ss_pred EEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 93 FVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 93 ~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
|++||++ ++++++++|||. ++||+++|+.|+.+.++ .|..+.++|.+++.+.+..
T Consensus 72 ~~~Vd~d--~~~~la~~~~V~--~iPT~~~fk~G~~v~~~---~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 72 VAVADLE--QSEAIGDRFNVR--RFPATLVFTDGKLRGAL---SGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp EEEECHH--HHHHHHHTTTCC--SSSEEEEESCC----CE---ESCCCHHHHHHHHHHHHC-
T ss_pred EEEEECC--CCHHHHHhcCCC--cCCeEEEEeCCEEEEEE---eCCCCHHHHHHHHHHHhcc
Confidence 9999999 889999999998 99999999888766666 3678899999999998753
No 164
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.20 E-value=4.4e-15 Score=113.91 Aligned_cols=96 Identities=15% Similarity=0.239 Sum_probs=77.4
Q ss_pred cCCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCcc--c--cccCCcccccEEEEEeC-CCce--
Q psy7938 188 DKSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVN--E--LEHTKITSFPTLKLYAK-DDNR-- 257 (305)
Q Consensus 188 ~~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~--~--~~~~~i~~~Ptl~~f~~-g~~~-- 257 (305)
..+++++|.||++||++|+.+.|.+ .++++.+. .++.++.+|++.. . ...++|.++||+++|++ +++.
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~--~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~ 94 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLE--ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEE 94 (130)
Confidence 4578999999999999999999999 88988874 3688889998532 2 28899999999999963 4554
Q ss_pred EEeeeCCCCHHHHHHHHHhcCCCCCCCC
Q psy7938 258 VIDYNGERVLEALSNFVESGGKEGGLPS 285 (305)
Q Consensus 258 ~~~~~g~~~~~~l~~fi~~~~~~~~~~~ 285 (305)
..++.|..+.+.|.++|++.........
T Consensus 95 ~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 122 (130)
T 2lst_A 95 VGRLFGSRPRAEFLKELRQVCVKGGACG 122 (130)
Confidence 5678999999999999998765444333
No 165
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.46 E-value=1.7e-13 Score=101.03 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=77.9
Q ss_pred cEEe-cccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------cccCCccc-c
Q psy7938 174 VKVL-VASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------LEHTKITS-F 245 (305)
Q Consensus 174 v~~l-~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------~~~~~i~~-~ 245 (305)
...| +.++|++++.. +++++|+|+|+|||+|+.+.|.|++++.. .++.++.+|.+.+. ..+++|++ .
T Consensus 8 ~~~i~s~e~f~~ii~~-~~~vvi~khatwCgpc~~~~~~~e~~~~~----~~v~~~~vdVde~r~~Sn~IA~~~~V~h~s 82 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEE-NKYVFVLKHSETCPISANAYDQFNKFLYE----RDMDGYYLIVQQERDLSDYIAKKTNVKHES 82 (112)
T ss_dssp EEECCSHHHHHHHHHH-CSEEEEEEECTTCHHHHHHHHHHHHHHHH----HTCCEEEEEGGGGHHHHHHHHHHHTCCCCS
T ss_pred eeecCCHHHHHHHHhc-CCCEEEEEECCcCHhHHHHHHHHHHHhcc----CCceEEEEEeecCchhhHHHHHHhCCccCC
Confidence 5566 44778887744 89999999999999999999999999984 36788888888763 38999995 9
Q ss_pred cEEEEEeCCCceEEeeeCCCCHHHHHHHH
Q psy7938 246 PTLKLYAKDDNRVIDYNGERVLEALSNFV 274 (305)
Q Consensus 246 Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi 274 (305)
|++++|++|+..-..-.+..+.+.|.+.+
T Consensus 83 Pq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 83 PQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp SEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 99999999966344467788988887764
No 166
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.46 E-value=4.8e-15 Score=108.97 Aligned_cols=88 Identities=14% Similarity=0.179 Sum_probs=72.4
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+++++.||++||++|+.+.|.+.++ +.++++++.|+.+|++ ++..++++||
T Consensus 17 ~~~~~~v~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~~v~~~--~~~~~~~~~~ 69 (105)
T 1fb6_A 17 SEVPVMVDFWAPWCGPCKLIAPVIDEL-------------------------AKEYSGKIAVYKLNTD--EAPGIATQYN 69 (105)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEEETT--TCHHHHHHTT
T ss_pred CCCcEEEEEECCCChHHHHHHHHHHHH-------------------------HHHhcCceEEEEEcCc--chHHHHHhCC
Confidence 356789999999999999888877666 3444566999999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++++.|.....+ .|..+.+.+.+++.+.
T Consensus 70 v~--~~Pt~~~~~~g~~~~~~---~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 70 IR--SIPTVLFFKNGERKESI---IGAVPKSTLTDSIEKY 104 (105)
T ss_dssp CC--SSSEEEEEETTEEEEEE---EECCCHHHHHHHHHHH
T ss_pred CC--cccEEEEEeCCeEEEEE---ecCCCHHHHHHHHHhh
Confidence 98 99999999877654555 3677889999999875
No 167
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.45 E-value=2.8e-15 Score=114.56 Aligned_cols=89 Identities=12% Similarity=0.090 Sum_probs=72.8
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
.+.+.+++.||++||++|+.+.|.+.++ +..+ +.+.|+.||++ ++.+++++|
T Consensus 35 ~~~k~vvv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~-~~v~~~~vd~d--~~~~l~~~~ 86 (125)
T 1r26_A 35 SEDILTVAWFTAVWCGPCKTIERPMEKI-------------------------AYEF-PTVKFAKVDAD--NNSEIVSKC 86 (125)
T ss_dssp HSSSCEEEEEECTTCHHHHHTHHHHHHH-------------------------HHHC-TTSEEEEEETT--TCHHHHHHT
T ss_pred ccCCEEEEEEECCcCHhHHHHHHHHHHH-------------------------HHHC-CCCEEEEEECC--CCHHHHHHc
Confidence 4456788899999999999998887776 2333 35899999999 889999999
Q ss_pred CCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 111 GMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+|. ++||+++|..|.....+. | .+.++|.+++.+.+.
T Consensus 87 ~v~--~~Pt~~i~~~G~~~~~~~---G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 87 RVL--QLPTFIIARSGKMLGHVI---G-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp TCC--SSSEEEEEETTEEEEEEE---S-SCHHHHHHHHHHHHH
T ss_pred CCC--cccEEEEEeCCeEEEEEe---C-CCHHHHHHHHHHHhc
Confidence 998 999999998776555553 4 688999999998864
No 168
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.45 E-value=4.6e-15 Score=110.70 Aligned_cols=89 Identities=18% Similarity=0.263 Sum_probs=68.6
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++...++ . +.+.|+.||++ ++.+++++|||
T Consensus 21 ~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~-----------------------~-~~~~~~~vd~~--~~~~~~~~~~v 74 (112)
T 3d6i_A 21 DKLIVLYFHTSWAEPCKALKQVFEAISNEPS-----------------------N-SNVSFLSIDAD--ENSEISELFEI 74 (112)
T ss_dssp TCCEEEEEECCC--CHHHHHHHHHHHHHCGG-----------------------G-TTSEEEEEETT--TCHHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHhcC-----------------------C-CCEEEEEEecc--cCHHHHHHcCC
Confidence 4678889999999999999888877633321 1 35899999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|+...++. |. ..++|.+++.+.+.
T Consensus 75 ~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 75 S--AVPYFIIIHKGTILKELS---GA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp C--SSSEEEEEETTEEEEEEC---SC-CHHHHHHHHHHHHH
T ss_pred C--cccEEEEEECCEEEEEec---CC-CHHHHHHHHHHHHh
Confidence 8 999999998776655563 43 45679999988764
No 169
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.45 E-value=1.3e-14 Score=107.24 Aligned_cols=88 Identities=14% Similarity=0.192 Sum_probs=72.7
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+++++.||++||++|+.+.|.+.++ ...+++++.++.||++ ++.+++++|||
T Consensus 19 ~~~~lv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~v~~~--~~~~~~~~~~v 71 (107)
T 1dby_A 19 SVPVLVDFWAPWCGPCRIIAPVVDEI-------------------------AGEYKDKLKCVKLNTD--ESPNVASEYGI 71 (107)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEEETT--TCHHHHHHHTC
T ss_pred CCcEEEEEECCCCHhHHHHHHHHHHH-------------------------HHHhCCceEEEEEECC--CCHHHHHHCCC
Confidence 46788899999999999888877666 3444567999999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
. ++||+++|+.|....++. |..+.+++.+++.+.+
T Consensus 72 ~--~~Pt~~~~~~G~~~~~~~---G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 72 R--SIPTIMVFKGGKKCETII---GAVPKATIVQTVEKYL 106 (107)
T ss_dssp C--SSCEEEEESSSSEEEEEE---SCCCHHHHHHHHHHHC
T ss_pred C--cCCEEEEEeCCEEEEEEe---CCCCHHHHHHHHHHHh
Confidence 8 999999998776545553 6788899999998764
No 170
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.44 E-value=1.6e-14 Score=111.85 Aligned_cols=90 Identities=16% Similarity=0.241 Sum_probs=74.1
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +..+++++.|+.||++ ++..++++|+
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l-------------------------~~~~~~~v~~~~vd~~--~~~~l~~~~~ 89 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDEL-------------------------AKEYDGQIVIYKVDTE--KEQELAGAFG 89 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHH-------------------------HHHTTTTCEEEEEETT--TCHHHHHHTT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHH-------------------------HHHhcCCEEEEEEeCC--CCHHHHHHcC
Confidence 446789999999999999998887766 3444567999999999 8889999999
Q ss_pred CCCCCCCeEEEEe-cCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 112 MSKDEVPSLRLIR-LEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 112 I~~~~~Ptl~~~~-~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
|. ++||+++|+ .|.. ..+ .|..+.++|.+|+.+.+..
T Consensus 90 v~--~~Pt~~~~~~~G~~-~~~---~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 90 IR--SIPSILFIPMEGKP-EMA---QGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp CC--SSCEEEEECSSSCC-EEE---ESCCCHHHHHHHHHHHHTS
T ss_pred CC--CCCEEEEECCCCcE-EEE---eCCCCHHHHHHHHHHHhhc
Confidence 98 999999995 4443 344 3778999999999998754
No 171
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.44 E-value=1.4e-14 Score=107.89 Aligned_cols=88 Identities=19% Similarity=0.260 Sum_probs=72.4
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+.+.+.|+.||++ ++..++++|+|
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~vd~~--~~~~~~~~~~v 76 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETL-------------------------SNDYAGKVIFLKVDVD--AVAAVAEAAGI 76 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTSEEEEEETT--TTHHHHHHHTC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHcCCCeEEEEEECC--chHHHHHHcCC
Confidence 45788899999999999998887766 3344457999999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|.....+. |. +.++|.+++.+.++
T Consensus 77 ~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 77 T--AMPTFHVYKDGVKADDLV---GA-SQDKLKALVAKHAA 111 (112)
T ss_dssp C--BSSEEEEEETTEEEEEEE---SC-CHHHHHHHHHHHHC
T ss_pred C--cccEEEEEECCeEEEEEc---CC-CHHHHHHHHHHHhc
Confidence 8 999999998776555553 55 88999999998864
No 172
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.44 E-value=2e-14 Score=106.31 Aligned_cols=87 Identities=11% Similarity=0.138 Sum_probs=70.2
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +.++ +.+.|+.||++ ++.+++++||
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~-------------------------~~~~-~~~~~~~vd~~--~~~~~~~~~~ 71 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSM-------------------------SNKY-PQAVFLEVDVH--QCQGTAATNN 71 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHH-------------------------HHHC-TTSEEEEEETT--TSHHHHHHTT
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHH-------------------------HHHC-CCcEEEEEECc--cCHHHHHhcC
Confidence 346788899999999999998887776 2333 45899999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
|. ++||+++|+.|+...++. | ...++|.+++.+.+
T Consensus 72 v~--~~Pt~~~~~~G~~~~~~~---G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 72 IS--ATPTFQFFRNKVRIDQYQ---G-ADAVGLEEKIKQHL 106 (107)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---S-SCHHHHHHHHHHHH
T ss_pred CC--cccEEEEEECCeEEEEEe---C-CCHHHHHHHHHHhc
Confidence 98 999999998886655663 4 45566999998765
No 173
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.44 E-value=1.4e-14 Score=107.68 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=69.9
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +..+. .+.|+.||++ ++..++++|+
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l-------------------------~~~~~-~~~~~~vd~~--~~~~l~~~~~ 74 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKF-------------------------SEQYP-QADFYKLDVD--ELGDVAQKNE 74 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCT-TSEEEEEETT--TCHHHHHHTT
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHH-------------------------HHHCC-CCEEEEEECC--CCHHHHHHcC
Confidence 346678889999999999998888777 23333 3889999999 8899999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++|+.|+.+.++. |. +.++|.+++.+.
T Consensus 75 v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 75 VS--AMPTLLLFKNGKEVAKVV---GA-NPAAIKQAIAAN 108 (109)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---SS-CHHHHHHHHHHH
T ss_pred CC--ccCEEEEEECCEEEEEEe---CC-CHHHHHHHHHhh
Confidence 98 999999999776655663 44 678999998875
No 174
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.44 E-value=2.6e-14 Score=108.02 Aligned_cols=88 Identities=17% Similarity=0.257 Sum_probs=72.6
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ..++.+++.|+.||++ ++..++++|+|
T Consensus 31 ~k~vlv~f~a~~C~~C~~~~~~l~~~-------------------------~~~~~~~v~~~~vd~d--~~~~l~~~~~v 83 (119)
T 1w4v_A 31 ETPVVVDFHAQWCGPCKILGPRLEKM-------------------------VAKQHGKVVMAKVDID--DHTDLAIEYEV 83 (119)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTSSEEEEEETT--TTHHHHHHTTC
T ss_pred CCcEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhcCCeEEEEEeCC--CCHHHHHHcCC
Confidence 45788899999999999888877666 3344567999999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
. ++||+++|+.|.....+ .|..+.++|.+|+.+.+
T Consensus 84 ~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 84 S--AVPTVLAMKNGDVVDKF---VGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp C--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHH
T ss_pred C--cccEEEEEeCCcEEEEE---cCCCCHHHHHHHHHHHh
Confidence 8 99999999777654555 36778999999998875
No 175
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.44 E-value=3.6e-15 Score=112.71 Aligned_cols=105 Identities=10% Similarity=0.129 Sum_probs=80.6
Q ss_pred cCceecCCCCCCC-ChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 16 EDMAKYKPATPEI-NVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
..+..++.+++.. ..++.+++++.||++||++|+.+.|.+.++ +..+++.+.|+
T Consensus 12 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~~~~~~ 66 (121)
T 2i1u_A 12 SATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEI-------------------------ATERATDLTVA 66 (121)
T ss_dssp CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEE
T ss_pred ccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhcCCeEEE
Confidence 3455665555542 223456789999999999999998887666 34444679999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.||++ ++..++++|+|. ++||+++|+.|.....+ .|..+.++|.+++.+.+
T Consensus 67 ~v~~~--~~~~~~~~~~i~--~~Pt~~~~~~g~~~~~~---~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 67 KLDVD--TNPETARNFQVV--SIPTLILFKDGQPVKRI---VGAKGKAALLRELSDVV 117 (121)
T ss_dssp EEETT--TCHHHHHHTTCC--SSSEEEEEETTEEEEEE---ESCCCHHHHHHHTCSCC
T ss_pred EEECC--CCHHHHHhcCCC--cCCEEEEEECCEEEEEe---cCCCCHHHHHHHHHHHH
Confidence 99999 888999999998 99999999877655555 36778889999887654
No 176
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.16 E-value=9.4e-15 Score=107.35 Aligned_cols=100 Identities=13% Similarity=0.206 Sum_probs=76.3
Q ss_pred ecCCCCCCCC-hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeC
Q psy7938 20 KYKPATPEIN-VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINT 98 (305)
Q Consensus 20 ~~~~~~~~~~-~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~ 98 (305)
+++.+++... ..+.+++++.||++||++|+.+.|.+.++. ..+.+.+.|+.+|+
T Consensus 5 ~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~-------------------------~~~~~~~~~~~v~~ 59 (106)
T 2yj7_A 5 EVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELA-------------------------KEYEGKVKVVKVNV 59 (106)
Confidence 3444444422 355688999999999999999998887773 33345799999999
Q ss_pred CchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 99 DEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 99 ~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+ ++..++++|||. ++||+++|+.|+....+ .|..+.+++.+++.+.
T Consensus 60 ~--~~~~~~~~~~v~--~~Pt~~~~~~g~~~~~~---~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 60 D--ENPNTAAQYGIR--SIPTLLLFKNGQVVDRL---VGAQPKEALKERIDKH 105 (106)
Confidence 9 888999999998 99999999766554444 3667778888888754
No 177
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.44 E-value=4.9e-15 Score=124.61 Aligned_cols=108 Identities=16% Similarity=0.218 Sum_probs=86.2
Q ss_pred cCceecCCCCCCCC-hhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 16 EDMAKYKPATPEIN-VDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 16 ~~~~~~~~~~~~~~-~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
..+..++.++|+.. .++.+.+++.|||+||++|+.+.|.+.++ +..+++++.|+
T Consensus 12 ~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~~~~v~~~ 66 (222)
T 3dxb_A 12 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEI-------------------------ADEYQGKLTVA 66 (222)
T ss_dssp CCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTCEEE
T ss_pred CCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHH-------------------------HHHhcCCcEEE
Confidence 34555655555532 34457889999999999999999888777 34445679999
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCc
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~ 155 (305)
.||++ ++..++++|+|. ++||+++|+.|+....+ .|..+.++|.+|+.+.+.+.
T Consensus 67 ~vd~d--~~~~l~~~~~v~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~~~l~~~ 120 (222)
T 3dxb_A 67 KLNID--QNPGTAPKYGIR--GIPTLLLFKNGEVAATK---VGALSKGQLKEFLDANLAGS 120 (222)
T ss_dssp EEETT--TCTTTGGGGTCC--SBSEEEEEETTEEEEEE---ESCCCHHHHHHHHHHHSCCS
T ss_pred EEECC--CCHHHHHHcCCC--cCCEEEEEECCeEEEEe---ccccChHHHHHHHHhhcccc
Confidence 99999 788999999998 99999999987665566 37789999999999998653
No 178
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.42 E-value=2e-14 Score=105.70 Aligned_cols=85 Identities=15% Similarity=0.280 Sum_probs=70.7
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+.+ +.|+.||++ ++..++++|+|
T Consensus 20 ~~~~~v~f~~~~C~~C~~~~~~~~~~-------------------------~~~~~~-~~~~~vd~~--~~~~~~~~~~v 71 (105)
T 3m9j_A 20 DKLVVVDFSATWCGPCKMIKPFFHSL-------------------------SEKYSN-VIFLEVDVD--DCQDVASESEV 71 (105)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHSTT-SEEEEEETT--TCHHHHHHTTC
T ss_pred CCeEEEEEECCCChhhHHHHHHHHHH-------------------------HHHccC-eEEEEEEhh--hhHHHHHHcCC
Confidence 45678889999999999998887776 333334 899999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
. ++||+++|+.|+...++. |. +.++|.+++.+.
T Consensus 72 ~--~~Pt~~~~~~g~~~~~~~---g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 72 K--SMPTFQFFKKGQKVGEFS---GA-NKEKLEATINEL 104 (105)
T ss_dssp C--BSSEEEEEETTEEEEEEE---SS-CHHHHHHHHHHH
T ss_pred C--cCcEEEEEECCeEEEEEe---CC-CHHHHHHHHHHh
Confidence 8 999999998887656663 55 889999999875
No 179
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.42 E-value=4.9e-15 Score=110.43 Aligned_cols=88 Identities=11% Similarity=0.211 Sum_probs=71.2
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.+++. .+ ..+.|+.||++ ++..++++|||
T Consensus 19 ~~~~vv~f~a~wC~~C~~~~~~l~~~~~-------------------------~~-~~v~~~~vd~~--~~~~l~~~~~v 70 (110)
T 2l6c_A 19 LSDAIVFFHKNLCPHCKNMEKVLDKFGA-------------------------RA-PQVAISSVDSE--ARPELMKELGF 70 (110)
T ss_dssp CSEEEEEEECSSCSTHHHHHHHHHHHHT-------------------------TC-TTSCEEEEEGG--GCHHHHHHTTC
T ss_pred CCCEEEEEECCCCHhHHHHHHHHHHHHH-------------------------HC-CCcEEEEEcCc--CCHHHHHHcCC
Confidence 4668889999999999999888777622 22 35889999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|+.+.++. |..+.++|.+++..+..
T Consensus 71 ~--~~Pt~~~~~~G~~v~~~~---G~~~~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 71 E--RVPTLVFIRDGKVAKVFS---GIMNPRELQALYASIHH 106 (110)
T ss_dssp C--SSCEEEEEESSSEEEEEE---SCCCHHHHHHHHHTC--
T ss_pred c--ccCEEEEEECCEEEEEEc---CCCCHHHHHHHHHHHhh
Confidence 8 999999998777656663 67889999999988754
No 180
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.42 E-value=2.2e-12 Score=100.43 Aligned_cols=102 Identities=16% Similarity=0.236 Sum_probs=83.0
Q ss_pred EEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------------------
Q psy7938 175 KVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-------------------- 234 (305)
Q Consensus 175 ~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-------------------- 234 (305)
..+++..+..... .+++++|.||++||++|+.+.+.+.++++.+++. +.++.++++.
T Consensus 15 ~~~~g~~~~~~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (148)
T 2b5x_A 15 AWLNGEVTREQLI-GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ--LNVVAVHMPRSEDDLDPGKIKETAAEHDIT 91 (148)
T ss_dssp EEESCCCCHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT--SEEEEEECCCSTTTSSHHHHHHHHHHTTCC
T ss_pred ccccCcccchhhc-CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC--cEEEEEEcCCCccccCHHHHHHHHHHcCCC
Confidence 5677777765443 5789999999999999999999999999999653 8888887542
Q ss_pred -------cc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 235 -------NE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 235 -------~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+. .+.|+|.++|++++++++++....+.|..+.+.|.++|++...
T Consensus 92 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 92 QPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp SCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred cceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 11 1689999999999997777767788999999999999987654
No 181
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.42 E-value=2.9e-14 Score=107.97 Aligned_cols=87 Identities=15% Similarity=0.210 Sum_probs=71.7
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+++++.||++||++|+.+.|.+.++ ...+.+ +.|+.||++ ++.+++++|||
T Consensus 34 ~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~-~~~~~vd~~--~~~~~~~~~~v 85 (122)
T 2vlu_A 34 KKLVVIDFTASWCGPCRIMAPVFADL-------------------------AKKFPN-AVFLKVDVD--ELKPIAEQFSV 85 (122)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCTT-SEEEEEETT--TCHHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHCCC-cEEEEEECC--CCHHHHHHcCC
Confidence 45688899999999999988877766 334445 899999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|+...++. |.. .++|.+++.+.+.
T Consensus 86 ~--~~Pt~~~~~~G~~~~~~~---G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 86 E--AMPTFLFMKEGDVKDRVV---GAI-KEELTAKVGLHAA 120 (122)
T ss_dssp C--SSSEEEEEETTEEEEEEE---SSC-HHHHHHHHHHHHS
T ss_pred C--cccEEEEEeCCEEEEEEe---CcC-HHHHHHHHHHHhc
Confidence 8 999999998776555563 555 8999999998864
No 182
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.42 E-value=1.2e-14 Score=113.59 Aligned_cols=93 Identities=4% Similarity=-0.019 Sum_probs=73.3
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.++++++|||+||++|+.+.|.+.++ +..+++++.|+.||++ ++.+++++|+|
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~~~~v~~~~vd~d--~~~~~~~~~~i 75 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSI-------------------------AEKVKNFAVIYLVDIT--EVPDFNKMYEL 75 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHH-------------------------HHHHTTTEEEEEEETT--TCCTTTTSSCS
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhCCCeEEEEEccc--cCHHHHHHcCC
Confidence 45788999999999999999988777 3344467999999999 77889999999
Q ss_pred CCCCCCeEEEEecCcCceeccC------CCCCC-CHHHHHHHHHHHHcC
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKP------ATPEI-SVDTVRSFVTEFLAG 154 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~------~~~~~-~~~~l~~fv~~~~~~ 154 (305)
. ++||+++|+.|+.+....+ -.|.. +.+++.++++..+.+
T Consensus 76 ~--~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 76 Y--DPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp C--SSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred C--CCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 8 9999999988765432111 02444 488999999998765
No 183
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.41 E-value=2.1e-15 Score=113.85 Aligned_cols=84 Identities=8% Similarity=0.075 Sum_probs=68.5
Q ss_pred HHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC
Q psy7938 35 SFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK 114 (305)
Q Consensus 35 ~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~ 114 (305)
.++++|||+||++|+.+.|.+.++ +.++ ..+.|++||++ +. +++|+|+
T Consensus 25 ~vvv~F~a~wc~~C~~~~p~l~~l-------------------------a~~~-~~v~f~kvd~d--~~---~~~~~v~- 72 (118)
T 3evi_A 25 WVIIHLYRSSIPMCLLVNQHLSLL-------------------------ARKF-PETKFVKAIVN--SC---IQHYHDN- 72 (118)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHH-------------------------HHHC-TTSEEEEEEGG--GT---STTCCGG-
T ss_pred eEEEEEeCCCChHHHHHHHHHHHH-------------------------HHHC-CCCEEEEEEhH--Hh---HHHCCCC-
Confidence 689999999999999999999988 3333 35899999999 53 6899998
Q ss_pred CCCCeEEEEecCcCceeccCC----CCCCCHHHHHHHHHHH
Q psy7938 115 DEVPSLRLIRLEEDMAKYKPA----TPEISVDTVRSFVTEF 151 (305)
Q Consensus 115 ~~~Ptl~~~~~~~~~~~~~~~----~~~~~~~~l~~fv~~~ 151 (305)
++||+++|+.|+.+.++.+. +...+.++|..++.+.
T Consensus 73 -~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 73 -CLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp -GCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred -CCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 99999999999877776542 1256888899888764
No 184
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.41 E-value=6.1e-13 Score=105.23 Aligned_cols=96 Identities=17% Similarity=0.263 Sum_probs=77.2
Q ss_pred cChhHHH---hcCCCcEEEEEE-CCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCccc-------------ccc
Q psy7938 180 SNFDEIA---FDKSKHVLVEFY-APWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVNE-------------LEH 239 (305)
Q Consensus 180 ~~f~~~v---~~~~~~~lv~f~-~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~~-------------~~~ 239 (305)
.++.+.+ ...+++++|.|| ++||++|+.+.|.+ .++++.+. .++.++.+|++... ...
T Consensus 34 ~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~--~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~ 111 (154)
T 2ju5_A 34 ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG--VHLHMVEVDFPQKNHQPEEQRQKNQELKAQ 111 (154)
T ss_dssp ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH--HHCEEEEEECCSSCCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc--CcEEEEEecCccccCCChhhHhhHHHHHHH
Confidence 4455544 235789999999 99999999999999 77776653 47899999988753 278
Q ss_pred CCcccccEEEEEeCCCceEEeeeCCC--CHHHHHHHHHhcC
Q psy7938 240 TKITSFPTLKLYAKDDNRVIDYNGER--VLEALSNFVESGG 278 (305)
Q Consensus 240 ~~i~~~Ptl~~f~~g~~~~~~~~g~~--~~~~l~~fi~~~~ 278 (305)
|+|.++||+++|+++++...++ |.. +.+.+.++|++..
T Consensus 112 ~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 112 YKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp TTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 9999999999997666657777 988 8999999998754
No 185
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.41 E-value=1.1e-14 Score=109.66 Aligned_cols=85 Identities=19% Similarity=0.290 Sum_probs=69.4
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +.++ .+.|+.||++ ++.+++++||
T Consensus 32 ~~~~~vv~f~a~wC~~C~~~~~~~~~~-------------------------~~~~--~~~~~~vd~~--~~~~~~~~~~ 82 (117)
T 2xc2_A 32 KNKLVVVDFFATWCGPCKTIAPLFKEL-------------------------SEKY--DAIFVKVDVD--KLEETARKYN 82 (117)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HTTS--SSEEEEEETT--TSHHHHHHTT
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHH-------------------------HHHc--CcEEEEEECC--ccHHHHHHcC
Confidence 345688899999999999988877666 2333 5889999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++|+.|....++. | .+.++|.+++.+.
T Consensus 83 v~--~~Pt~~~~~~G~~~~~~~---G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 83 IS--AMPTFIAIKNGEKVGDVV---G-ASIAKVEDMIKKF 116 (117)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---S-SCHHHHHHHHHHH
T ss_pred CC--ccceEEEEeCCcEEEEEe---C-CCHHHHHHHHHHh
Confidence 98 999999998776655553 4 5788999998875
No 186
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.40 E-value=1.6e-12 Score=102.16 Aligned_cols=93 Identities=17% Similarity=0.298 Sum_probs=77.6
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------c-ccCC-
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------L-EHTK- 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------~-~~~~- 241 (305)
.+++++|.||++||++|+.+.|.+.++++.++. .++.++.|+++... . +.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKK-GSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 478999999999999999999999999999953 57889888886211 1 5677
Q ss_pred -cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 242 -ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 242 -i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
+.++|+++++.++++...++.|..+.+.|.++|++......
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~~~~ 143 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHSKCR 143 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHTC--
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHHHhh
Confidence 99999999998887778889999999999999998654433
No 187
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.40 E-value=2.1e-12 Score=99.15 Aligned_cols=86 Identities=20% Similarity=0.380 Sum_probs=73.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc----------------------c-c-ccCCccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN----------------------E-L-EHTKITS 244 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~----------------------~-~-~~~~i~~ 244 (305)
.+++++|.||++||++|+.+.+.+.++++.++ ++.++.|+++.+ . . +.+++.+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 99 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP---AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPW 99 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC---CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCC
Confidence 47899999999999999999999999999995 688888887652 2 2 6799999
Q ss_pred ccEEEEEeCCCceEEeee---CCCCHHHHHHHHHhcC
Q psy7938 245 FPTLKLYAKDDNRVIDYN---GERVLEALSNFVESGG 278 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~---g~~~~~~l~~fi~~~~ 278 (305)
+|++++++++++.. ++. |..+.+.|.++|++..
T Consensus 100 ~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 100 QPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp SSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 99999998777745 899 9999999999998753
No 188
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.40 E-value=6.3e-13 Score=111.97 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=80.1
Q ss_pred cChhHHH-hcCCCcEEEEEE-----CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEE
Q psy7938 180 SNFDEIA-FDKSKHVLVEFY-----APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLY 251 (305)
Q Consensus 180 ~~f~~~v-~~~~~~~lv~f~-----~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f 251 (305)
+.+.+++ .+..++++|.|| ++||++|+.+.|.|.++|..+.+.+++.++++|++.+.. .+|+|+++||+++|
T Consensus 9 ~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~ 88 (229)
T 2ywm_A 9 MQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIE 88 (229)
T ss_dssp HHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEE
T ss_pred HHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEE
Confidence 3444545 355667776666 899999999999999999888544589999999998774 89999999999999
Q ss_pred eCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 252 AKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 252 ~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|.. ..+|.|.++.+.+..|+....
T Consensus 89 ~~~~~-~~~~~G~~~~~~l~~~~~~~~ 114 (229)
T 2ywm_A 89 GDKDY-GIRYIGLPAGLEFTTLINGIF 114 (229)
T ss_dssp SSSCC-CEEEESCCCTTHHHHHHHHHH
T ss_pred CCCcc-cceecCCccHHHHHHHHHHHH
Confidence 85544 899999999999999998753
No 189
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.40 E-value=6.6e-13 Score=106.35 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=67.9
Q ss_pred cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCC---cccccEEEEEeCC
Q psy7938 180 SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTK---ITSFPTLKLYAKD 254 (305)
Q Consensus 180 ~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~---i~~~Ptl~~f~~g 254 (305)
..+..+..-.+++++|.|||+||++|+.+.|.+++++..+. ++.+..+|.+.+.. ..|. +.++||+++|++|
T Consensus 44 ~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~---~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~ 120 (167)
T 1z6n_A 44 ALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP---NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEE 120 (167)
T ss_dssp HHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT---TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTT
T ss_pred HHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC---CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCC
Confidence 44444332356789999999999999999999999998873 68888898887654 5665 9999999999998
Q ss_pred CceEEeeeCCCCHHHHHHHHH
Q psy7938 255 DNRVIDYNGERVLEALSNFVE 275 (305)
Q Consensus 255 ~~~~~~~~g~~~~~~l~~fi~ 275 (305)
++...++ |... ..+.+.+.
T Consensus 121 G~~~~~~-g~~p-~~~~~~i~ 139 (167)
T 1z6n_A 121 FNLLGRF-VERP-QAVLDGGP 139 (167)
T ss_dssp CCEEEEE-ESSC-HHHHHHCH
T ss_pred CCEEEEE-cCCC-HHHHHhHH
Confidence 7745555 5444 33444444
No 190
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.39 E-value=2.7e-14 Score=106.35 Aligned_cols=103 Identities=13% Similarity=0.150 Sum_probs=75.0
Q ss_pred CceecCCCCCCCChh--HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 17 DMAKYKPATPEINVD--TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~--~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
.+..++.++++.... +.+++++.||++||++|+.+.|.+.++ +..+.+ +.|+
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~-------------------------~~~~~~-v~~~ 59 (111)
T 2pu9_C 6 KVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKL-------------------------AEEYLD-VIFL 59 (111)
T ss_dssp SEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCTT-SEEE
T ss_pred ccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHH-------------------------HHHCCC-eEEE
Confidence 344554444443222 356789999999999999998887766 233333 8899
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.||++. ++..++++|||. ++||++++..|.....+. |. +.++|.+++.+.+
T Consensus 60 ~vd~~~-~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 60 KLDCNQ-ENKTLAKELGIR--VVPTFKILKENSVVGEVT---GA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEECSS-TTHHHHHHHCCS--BSSEEEEESSSSEEEEEE---SS-CHHHHHHHHHHHH
T ss_pred EEecCc-chHHHHHHcCCC--eeeEEEEEeCCcEEEEEc---CC-CHHHHHHHHHHhh
Confidence 999973 357899999998 999999988776555553 33 4889999998764
No 191
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.39 E-value=2e-12 Score=99.05 Aligned_cols=100 Identities=19% Similarity=0.322 Sum_probs=78.9
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc------------------
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN------------------ 235 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~------------------ 235 (305)
+..+++..+.... -.+++++|.||++||++|+.+.+.+.++++.+. ++.++.++++.+
T Consensus 10 ~~~~~g~~~~l~~-~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (136)
T 1zzo_A 10 AKTLDGHDFHGES-LLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP---EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQ 85 (136)
T ss_dssp EEBTTSCEEEGGG-GTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT---TSEEEEEECSSCHHHHHHHHHHTTCTTSEE
T ss_pred cccCCCCEeeHHH-hCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC---CeEEEEEeCCCCHHHHHHHHHHcCCCceEE
Confidence 3344444443322 247899999999999999999999999999985 678888887541
Q ss_pred -----c--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 236 -----E--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 236 -----~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
. .+.+++.++|++++++++++.. .+.|..+.+.|.++|++..
T Consensus 86 ~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 86 LADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp EECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred EEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 1 1678999999999998777745 8999999999999998764
No 192
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.39 E-value=3.2e-13 Score=106.21 Aligned_cols=95 Identities=12% Similarity=0.103 Sum_probs=66.7
Q ss_pred ChhHHH---hcCCCcEEEEEECCCChhhhhHHHHHHHHH---HHhCCCCceEEEEEeCCccc-cccCCcccccEEEEEeC
Q psy7938 181 NFDEIA---FDKSKHVLVEFYAPWCGHCKQLAPIYDKLG---EKFADRDDITIAKIDATVNE-LEHTKITSFPTLKLYAK 253 (305)
Q Consensus 181 ~f~~~v---~~~~~~~lv~f~~~~C~~C~~~~~~~~~la---~~~~~~~~v~~~~id~~~~~-~~~~~i~~~Ptl~~f~~ 253 (305)
+|++.+ ...+++++|+|||+||++|+.+.|.+.+.. .... .+++.+.+|.+..+ ...+++.++||+++|++
T Consensus 32 ~~~~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~ 109 (151)
T 3ph9_A 32 TYEEGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDKNLSPDGQYVPRIMFVDP 109 (151)
T ss_dssp SHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCGGGCTTCCCSSEEEEECT
T ss_pred CHHHHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhhHhhcCCCCCCEEEEECC
Confidence 444443 356899999999999999999999998643 2221 25677777643333 37899999999999995
Q ss_pred CCceEEeeeCC-------C---CHHHHHHHHHhc
Q psy7938 254 DDNRVIDYNGE-------R---VLEALSNFVESG 277 (305)
Q Consensus 254 g~~~~~~~~g~-------~---~~~~l~~fi~~~ 277 (305)
+++...+..|. . +.+.+++.+++.
T Consensus 110 ~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 110 SLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp TSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 55556677887 3 445555555544
No 193
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.39 E-value=8.6e-14 Score=102.34 Aligned_cols=87 Identities=11% Similarity=0.199 Sum_probs=70.6
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ ...+++.+.|+.||++ ++..++++||
T Consensus 19 ~~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~v~~~--~~~~~~~~~~ 71 (106)
T 1xwb_A 19 SGKLVVLDFFATWCGPCKMISPKLVEL-------------------------STQFADNVVVLKVDVD--ECEDIAMEYN 71 (106)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHTTTTEEEEEEETT--TCHHHHHHTT
T ss_pred CCCEEEEEEECCcCHHHHHhhHHHHHH-------------------------HHHhCCCeEEEEEecc--chHHHHHHcC
Confidence 345688899999999999888877666 3344467999999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++|+.|.....+. | .+.+++.+++.+.
T Consensus 72 v~--~~Pt~~~~~~G~~~~~~~---g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 72 IS--SMPTFVFLKNGVKVEEFA---G-ANAKRLEDVIKAN 105 (106)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---S-CCHHHHHHHHHHT
T ss_pred CC--cccEEEEEcCCcEEEEEc---C-CCHHHHHHHHHHh
Confidence 98 999999998776555553 4 6788899988764
No 194
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=4.8e-15 Score=114.92 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=71.2
Q ss_pred CceecCCCCCCCChhHHH--HHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCc-eEEE
Q psy7938 17 DMAKYKPATPEINVDTVR--SFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNL-KVLF 93 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~--~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~ 93 (305)
.+..++.++|+......+ ++++.|||+||++|+.+.|.+.++ +.++++ .+.|
T Consensus 8 ~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l-------------------------~~~~~~~~v~~ 62 (137)
T 2dj0_A 8 YIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADL-------------------------SLKYNCTGLNF 62 (137)
T ss_dssp CCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHH-------------------------HHHHCSSSCEE
T ss_pred eEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHhCCCCeEE
Confidence 344554444443333333 679999999999999999888777 233343 6999
Q ss_pred EEEeCCchhHHHHHHHcCCC----CCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHH
Q psy7938 94 VTINTDEEDHQKILEFFGMS----KDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFV 148 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~----~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv 148 (305)
+.||++ ++..++++|+|. ..++||+++|+.|+...++. |..+.++|.+|+
T Consensus 63 ~~vd~~--~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~---G~~~~~~l~~~l 116 (137)
T 2dj0_A 63 GKVDVG--RYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRP---QIDKKGRAVSWT 116 (137)
T ss_dssp EECCTT--TCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEES---CBCSSSCBCCCC
T ss_pred EEEeCc--cCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEec---CcCchHHHHHHH
Confidence 999999 889999999994 12799999998776655553 344444444443
No 195
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.08 E-value=3.5e-14 Score=108.82 Aligned_cols=98 Identities=5% Similarity=0.042 Sum_probs=74.9
Q ss_pred CCChhHHHHHhhhhhcCccccccccccee---eeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhH
Q psy7938 27 EINVDTVRSFVTEFLAGNLKHSKFKKNLY---IHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDH 103 (305)
Q Consensus 27 ~~~~~~~~~~iv~f~a~wc~~c~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 103 (305)
.....+.+.+++.||++||++|+.+.|.+ .++. ..+++.+.++.||++..++
T Consensus 13 ~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~vd~~~~~~ 67 (130)
T 2lst_A 13 ALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVS-------------------------RLLEARFVVASVSVDTPEG 67 (130)
Confidence 33445567899999999999999999888 5552 2223568899999975577
Q ss_pred HHHHHHcCCCCCCCCeEEEEe--cCcC--ceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 104 QKILEFFGMSKDEVPSLRLIR--LEED--MAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 104 ~~l~~~~~I~~~~~Ptl~~~~--~~~~--~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
..++++|+|. ++||+++|+ .|.. ..++ .|..+.++|.+++.+.+.+
T Consensus 68 ~~~~~~~~v~--~~Pt~~~~d~~~G~~~~~~~~---~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 68 QELARRYRVP--GTPTFVFLVPKAGAWEEVGRL---FGSRPRAEFLKELRQVCVK 117 (130)
Confidence 8999999998 999999995 3433 3334 3667888999999988754
No 196
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.38 E-value=5.2e-14 Score=105.61 Aligned_cols=85 Identities=16% Similarity=0.134 Sum_probs=68.1
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+.+++.||++||++|+.+.|.+.++ +..+.+ +.|+.||++ ++.+++++|+
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~-------------------------~~~~~~-v~~~~vd~~--~~~~l~~~~~ 80 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKL-------------------------IQAYPD-VRFVKCDVD--ESPDIAKECE 80 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHH-------------------------HHHCTT-SEEEEEETT--TCHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHCCC-CEEEEEECC--CCHHHHHHCC
Confidence 345678889999999999998887766 334445 899999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
|. ++||+++|+.|+...++. |.. .++|.+++.+
T Consensus 81 v~--~~Pt~~~~~~G~~~~~~~---G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 81 VT--AMPTFVLGKDGQLIGKII---GAN-PTALEKGIKD 113 (114)
T ss_dssp CC--SBSEEEEEETTEEEEEEE---SSC-HHHHHHHHHT
T ss_pred CC--cccEEEEEeCCeEEEEEe---CCC-HHHHHHHHHh
Confidence 98 999999998776555563 455 8888888764
No 197
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.38 E-value=3.1e-12 Score=99.19 Aligned_cols=86 Identities=20% Similarity=0.451 Sum_probs=73.9
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-------------------------c-c-cccCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-------------------------N-E-LEHTK 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-------------------------~-~-~~~~~ 241 (305)
.+++++|.||++||++|+.+.+.+.++++.++. .++.++.|+++. + . .+.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPS-DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCC-SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC
Confidence 578999999999999999999999999999964 468888888754 1 1 27899
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHH
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVE 275 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~ 275 (305)
+.++|++++++++++....+.|..+.+.|.++|+
T Consensus 112 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 112 IITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp CCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred cCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 9999999999877776788999999999999873
No 198
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.37 E-value=6e-15 Score=111.29 Aligned_cols=88 Identities=10% Similarity=0.101 Sum_probs=64.6
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc--hhHHHHHHH
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE--EDHQKILEF 109 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~l~~~ 109 (305)
+.+++++.|||+||++|+.+.|.+.++. ..++..+.++.+|... .++..++++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~-------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVV-------------------------AETKAHIYFINSEEPSQLNDLQAFRSR 82 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHH-------------------------HHHCCCCEEEETTCGGGHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHH-------------------------HhcCCeEEEEECCCcCcHHHHHHHHHH
Confidence 3457888999999999999988887762 2223445555333221 255789999
Q ss_pred cCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHH
Q psy7938 110 FGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVT 149 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~ 149 (305)
|||. ++||+++|+.|+...++ .|..+.++|.+|+.
T Consensus 83 ~~i~--~~Pt~~~~~~G~~~~~~---~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 83 YGIP--TVPGFVHITDGQINVRC---DSSMSAQEIKDFAG 117 (118)
T ss_dssp HTCC--SSCEEEEEETTEEEEEC---CTTCCHHHHHHHHT
T ss_pred cCCC--CCCeEEEEECCEEEEEe---cCCCCHHHHHHHhh
Confidence 9998 99999999877655555 37788999998874
No 199
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.37 E-value=1.2e-14 Score=108.46 Aligned_cols=87 Identities=10% Similarity=0.237 Sum_probs=69.9
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
++.+.+++.||++||++|+.+.|.+.++ ...+. .+.|+.||++ ++..++++|
T Consensus 24 ~~~k~vlv~f~a~~C~~C~~~~~~l~~l-------------------------~~~~~-~v~~~~vd~~--~~~~~~~~~ 75 (112)
T 1syr_A 24 SQNELVIVDFFAEWCGPCKRIAPFYEEC-------------------------SKTYT-KMVFIKVDVD--EVSEVTEKE 75 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCT-TSEEEEEETT--TTHHHHHHT
T ss_pred ccCCeEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHcC-CCEEEEEECC--CCHHHHHHc
Confidence 4446678889999999999988887666 23333 4899999999 888999999
Q ss_pred CCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 111 GMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+|. ++||+++|+.|....++. |. +.++|.+++.+.
T Consensus 76 ~v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 76 NIT--SMPTFKVYKNGSSVDTLL---GA-NDSALKQLIEKY 110 (112)
T ss_dssp TCC--SSSEEEEEETTEEEEEEE---SC-CHHHHHHHHHTT
T ss_pred CCC--cccEEEEEECCcEEEEEe---CC-CHHHHHHHHHHh
Confidence 998 999999998776545552 55 889999998765
No 200
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.37 E-value=2.2e-13 Score=100.79 Aligned_cols=75 Identities=23% Similarity=0.369 Sum_probs=59.7
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC------ccc--cccCCcccccEEEEEeCCCceEEee
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT------VNE--LEHTKITSFPTLKLYAKDDNRVIDY 261 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~------~~~--~~~~~i~~~Ptl~~f~~g~~~~~~~ 261 (305)
++.++|.|||+||++|+.+.|.|+++++.+. .+|++ .+. +..++|+++||+++ +| + .|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~--------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G-~---~~ 77 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP--------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG-R---TY 77 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC--------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TT-E---EE
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC--------EEEEecccccchhHHHHHHcCCeEeCEEEE--CC-E---Ee
Confidence 4567899999999999999999999997773 34444 222 27899999999877 44 3 38
Q ss_pred eCCCCHHHHHHHHHhcC
Q psy7938 262 NGERVLEALSNFVESGG 278 (305)
Q Consensus 262 ~g~~~~~~l~~fi~~~~ 278 (305)
.|.++.+.|.+|+.-..
T Consensus 78 ~G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 78 TGVRSLEALAVASGYPL 94 (106)
T ss_dssp ESCCCHHHHHHHHTCCC
T ss_pred cCCCCHHHHHHHhCCcc
Confidence 99999999999986544
No 201
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.37 E-value=4.2e-12 Score=99.57 Aligned_cols=93 Identities=17% Similarity=0.370 Sum_probs=77.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------cc-ccCCccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------EL-EHTKITS 244 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------~~-~~~~i~~ 244 (305)
.+++++|.||++||++|+.+.|.+.++++.+.. .++.++.|+++.. .. +.|+|.+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 103 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS-QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSP 103 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCC
Confidence 478999999999999999999999999999964 3578888877543 12 6799999
Q ss_pred ccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCC
Q psy7938 245 FPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~ 282 (305)
+|+++++.++++....+.|..+.+.|.++|++......
T Consensus 104 ~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~~ 141 (151)
T 2f9s_A 104 LPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGET 141 (151)
T ss_dssp SCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC--
T ss_pred CCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhhh
Confidence 99999998777767788999999999999998765443
No 202
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.36 E-value=1.7e-13 Score=104.31 Aligned_cols=86 Identities=17% Similarity=0.291 Sum_probs=69.8
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ +..+. .+.|+.||++ ++..++++|+|
T Consensus 38 ~k~vvv~f~a~wC~~C~~~~~~l~~l-------------------------~~~~~-~v~~~~vd~d--~~~~l~~~~~v 89 (124)
T 1xfl_A 38 KTLVVVDFTASWCGPCRFIAPFFADL-------------------------AKKLP-NVLFLKVDTD--ELKSVASDWAI 89 (124)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCS-SEEEEEEETT--TSHHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHCC-CcEEEEEECc--cCHHHHHHcCC
Confidence 34678889999999999998877666 23333 5999999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
. ++||+++|..|....++. | .+.++|.+++.+.+
T Consensus 90 ~--~~Pt~~~~~~G~~~~~~~---G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 90 Q--AMPTFMFLKEGKILDKVV---G-AKKDELQSTIAKHL 123 (124)
T ss_dssp C--SSSEEEEEETTEEEEEEE---S-CCHHHHHHHHHHHC
T ss_pred C--ccCEEEEEECCEEEEEEe---C-CCHHHHHHHHHHhc
Confidence 8 999999998776555553 4 57889999998764
No 203
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.36 E-value=5.9e-14 Score=106.63 Aligned_cols=103 Identities=12% Similarity=0.158 Sum_probs=75.8
Q ss_pred CceecCCCCCCCChh--HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEE
Q psy7938 17 DMAKYKPATPEINVD--TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFV 94 (305)
Q Consensus 17 ~~~~~~~~~~~~~~~--~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 94 (305)
.+..++.++++.... +.+++++.||++||++|+.+.|.+.++ ..++. .+.|+
T Consensus 19 ~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~-------------------------~~~~~-~~~~~ 72 (124)
T 1faa_A 19 KVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKL-------------------------AEEYL-DVIFL 72 (124)
T ss_dssp SEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCT-TSEEE
T ss_pred ceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHH-------------------------HHHCC-CCEEE
Confidence 455555444443333 356788999999999999998887666 23333 38899
Q ss_pred EEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 95 TINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 95 ~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.||++. ++.+++++|||. ++||+++++.|+...++. |. ..+++.+++.+..
T Consensus 73 ~vd~~~-~~~~~~~~~~v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~i~~~~ 123 (124)
T 1faa_A 73 KLDCNQ-ENKTLAKELGIR--VVPTFKILKENSVVGEVT---GA-KYDKLLEAIQAAR 123 (124)
T ss_dssp EEECSS-TTHHHHHHHCCS--SSSEEEEEETTEEEEEEE---SS-CHHHHHHHHHHHT
T ss_pred EEecCc-chHHHHHHcCCC--eeeEEEEEeCCcEEEEEc---CC-CHHHHHHHHHHhh
Confidence 999973 357899999998 999999998886655553 43 3789999988763
No 204
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.36 E-value=1.6e-13 Score=105.85 Aligned_cols=85 Identities=16% Similarity=0.158 Sum_probs=68.4
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMS 113 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~ 113 (305)
+.+|+.|||+||++|+.+.|.+.++ ...+ .+.|+.||++ ++..++++|||.
T Consensus 41 k~vvv~F~a~wC~~C~~~~p~l~~l-------------------------~~~~--~v~~~~vd~~--~~~~l~~~~~v~ 91 (133)
T 3cxg_A 41 SSIVIKFGAVWCKPCNKIKEYFKNQ-------------------------LNYY--YVTLVDIDVD--IHPKLNDQHNIK 91 (133)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHGG-------------------------GGTE--ECEEEEEETT--TCHHHHHHTTCC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHhc--CEEEEEEecc--chHHHHHhcCCC
Confidence 4688899999999999998887766 2222 5889999999 889999999998
Q ss_pred CCCCCeEEEEe--cCc--CceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 114 KDEVPSLRLIR--LEE--DMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 114 ~~~~Ptl~~~~--~~~--~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
++||+++|+ .|+ ...++. |. +.++|.+++.+.+.
T Consensus 92 --~~Pt~~~~~~~~g~g~~~~~~~---G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 92 --ALPTFEFYFNLNNEWVLVHTVE---GA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp --SSSEEEEEEEETTEEEEEEEEE---SC-CHHHHHHHHHHHSE
T ss_pred --CCCEEEEEEecCCCeEEEEEEc---CC-CHHHHHHHHHHHHH
Confidence 999999996 554 334442 44 78999999998864
No 205
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.36 E-value=4.7e-12 Score=99.57 Aligned_cols=89 Identities=21% Similarity=0.321 Sum_probs=74.2
Q ss_pred CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC----------------------------Ccccc-ccCC
Q psy7938 191 KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA----------------------------TVNEL-EHTK 241 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~----------------------------~~~~~-~~~~ 241 (305)
++++|.||++||++|+.+.+.+.++++.+ ++.++.|++ ..... ..|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~----~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET----GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH----CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc----CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC
Confidence 89999999999999999999999999999 456666666 11222 7899
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
+.++|+++++.++++....+.|..+.+.|.++|++.....+.
T Consensus 107 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 148 (154)
T 3ia1_A 107 VLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADLEG 148 (154)
T ss_dssp BCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC--
T ss_pred CCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcccc
Confidence 999999999988777688899999999999999998765544
No 206
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.36 E-value=4e-12 Score=101.05 Aligned_cols=106 Identities=20% Similarity=0.259 Sum_probs=82.5
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccC-----------
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHT----------- 240 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~----------- 240 (305)
+..+++..+.-.. -.+++++|.||++||++|+.+.|.+.++++.+++ .++.++.|+++.... ..+
T Consensus 19 l~~~~g~~~~l~~-~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 96 (165)
T 3or5_A 19 GVTVDGKPFSSAS-LKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWAS-RGFTFVGIAVNEQLPNVKNYMKTQGIIYPVM 96 (165)
T ss_dssp EECTTSCEEEGGG-GTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTT-TTEEEEEEECSCCHHHHHHHHHHHTCCSCEE
T ss_pred eeCCCCCEechhH-cCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceE
Confidence 4444444443222 2578999999999999999999999999999974 358999998876432 333
Q ss_pred ----------------CcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 241 ----------------KITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 241 ----------------~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++.++|++++++++++....+.|..+.+.|.++|++.....
T Consensus 97 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~ 153 (165)
T 3or5_A 97 MATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGAK 153 (165)
T ss_dssp ECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC--
T ss_pred ecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhhh
Confidence 79999999999887776788999999999999999876433
No 207
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.34 E-value=6.6e-12 Score=98.35 Aligned_cols=99 Identities=46% Similarity=0.802 Sum_probs=79.4
Q ss_pred hhhhhhHHH-HHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 74 VDTVRSFVT-EFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 74 ~~~~~~~~~-~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.+++.+.+. .+++++|++.|+.+|.+..++.++++.||++.+..|++++++......+|.+..+.++.+.|++|+.+++
T Consensus 47 ~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 47 YDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp HHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHH
Confidence 444555433 4577889999999999545888899999998556999999986333467876557899999999999999
Q ss_pred cCcccccccCCCCCCccccC
Q psy7938 153 AGNLKQHLLSQPLPEDWDKN 172 (305)
Q Consensus 153 ~~~~~~~~~s~~~p~~~~~~ 172 (305)
+|+++|+++|+++|+.|+++
T Consensus 127 ~GkL~p~~KSEpiPe~wn~~ 146 (147)
T 3bj5_A 127 EGKIKPHLMSQELPEDWDKQ 146 (147)
T ss_dssp TTCSCEEECCSCCCGGGC--
T ss_pred cCCccccccCCCCCCCcCCC
Confidence 99999999999999987653
No 208
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.34 E-value=9.4e-13 Score=105.27 Aligned_cols=91 Identities=14% Similarity=0.237 Sum_probs=67.7
Q ss_pred cCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-ccccCCc--ccccEEEEEeCCCceEEeeeCC
Q psy7938 188 DKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-ELEHTKI--TSFPTLKLYAKDDNRVIDYNGE 264 (305)
Q Consensus 188 ~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-~~~~~~i--~~~Ptl~~f~~g~~~~~~~~g~ 264 (305)
..+++++|.||++||++|+.+.|.|.+++........+..+.+|.+.. ....+++ .++||+++|+++++...++.|.
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~ 123 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINE 123 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCT
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCC
Confidence 468899999999999999999999999877653323455555554444 3466777 6799999996555545667774
Q ss_pred ----------CCHHHHHHHHHhcC
Q psy7938 265 ----------RVLEALSNFVESGG 278 (305)
Q Consensus 265 ----------~~~~~l~~fi~~~~ 278 (305)
.+.+.|.++|++..
T Consensus 124 ~~~~~~~~~~~~~~~l~~~l~~~l 147 (164)
T 1sen_A 124 NGNPSYKYFYVSAEQVVQGMKEAQ 147 (164)
T ss_dssp TSCTTSTTCCCSHHHHHHHHHHHH
T ss_pred CCccchhcccCCHHHHHHHHHHHH
Confidence 78889999888653
No 209
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.34 E-value=1.3e-13 Score=104.43 Aligned_cols=87 Identities=13% Similarity=0.227 Sum_probs=70.2
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCce-EEEEEEeCCchhHHHHHHHcC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLK-VLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~vd~~~~~~~~l~~~~~ 111 (305)
.+.+++.||++||++|+.+.|.+.++...+ .++ +.|+.||++ ++..++++|+
T Consensus 33 ~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~-------------------------~~~~v~~~~vd~d--~~~~~~~~~~ 85 (121)
T 2j23_A 33 DKVVVIDFWATWCGPCKMIGPVFEKISDTP-------------------------AGDKVGFYKVDVD--EQSQIAQEVG 85 (121)
T ss_dssp SSCEEEEEECTTCSTHHHHHHHHHHHHTST-------------------------HHHHSEEEEEETT--TCHHHHHHHT
T ss_pred CCEEEEEEECCCCHhHHHHHHHHHHHHHHC-------------------------cCCcEEEEEEECc--CCHHHHHHcC
Confidence 456788899999999999888877663332 233 889999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
|. ++||+++|+.|....++. |. +.++|.+++.+.+
T Consensus 86 v~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 86 IR--AMPTFVFFKNGQKIDTVV---GA-DPSKLQAAITQHS 120 (121)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---SS-CHHHHHHHHHHHT
T ss_pred CC--cccEEEEEECCeEEeeEc---CC-CHHHHHHHHHHhh
Confidence 98 999999998776555553 55 8899999998764
No 210
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.34 E-value=2.2e-12 Score=89.19 Aligned_cols=74 Identities=16% Similarity=0.353 Sum_probs=60.5
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEEEEeCCCceEEeeeCCC-CHHHHH
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLKLYAKDDNRVIDYNGER-VLEALS 271 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~-~~~~l~ 271 (305)
..|.||++||++|+.+.|.++++++.+. .++.++.+| +.....+++|.++||+++ +| + .... |.. +.+.|.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~~v~-~~~~~~~~~v~~~Pt~~~--~G-~-~~~~-G~~~~~~~l~ 73 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG--IDAEFEKIK-EMDQILEAGLTALPGLAV--DG-E-LKIM-GRVASKEEIK 73 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT--CCEEEEEEC-SHHHHHHHTCSSSSCEEE--TT-E-EEEC-SSCCCHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC--CceEEEEec-CHHHHHHCCCCcCCEEEE--CC-E-EEEc-CCCCCHHHHH
Confidence 3589999999999999999999999985 478999998 333348999999999999 44 3 3333 887 899999
Q ss_pred HHH
Q psy7938 272 NFV 274 (305)
Q Consensus 272 ~fi 274 (305)
+||
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 886
No 211
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.34 E-value=1.5e-13 Score=100.68 Aligned_cols=86 Identities=14% Similarity=0.217 Sum_probs=69.4
Q ss_pred HHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG 111 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~ 111 (305)
+.+++++.||++||++|+.+.|.+.++ ...+. .+.|+.+|++ ++.+++++||
T Consensus 18 ~~~~~~v~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~-~~~~~~v~~~--~~~~~~~~~~ 69 (104)
T 2vim_A 18 KGRLIVVDFFAQWCGPCRNIAPKVEAL-------------------------AKEIP-EVEFAKVDVD--QNEEAAAKYS 69 (104)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCT-TSEEEEEETT--TCHHHHHHTT
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHH-------------------------HHHCC-CCEEEEEecc--CCHHHHHHcC
Confidence 345788889999999999888877665 23333 5889999999 8889999999
Q ss_pred CCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 112 MSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
|. ++||+++|+.|+...++. | .+.++|.+++.+.
T Consensus 70 v~--~~Pt~~~~~~g~~~~~~~---G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 70 VT--AMPTFVFIKDGKEVDRFS---G-ANETKLRETITRH 103 (104)
T ss_dssp CC--SSSEEEEEETTEEEEEEE---S-SCHHHHHHHHHHH
T ss_pred Cc--cccEEEEEeCCcEEEEEe---C-CCHHHHHHHHHhh
Confidence 98 999999998776555553 4 6888999998875
No 212
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.32 E-value=2e-12 Score=102.80 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=80.2
Q ss_pred cEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC--------------------
Q psy7938 174 VKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT-------------------- 233 (305)
Q Consensus 174 v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~-------------------- 233 (305)
+..+++..+.... ..+++++|.||++||++|+.+.|.+.++++.++.. ++.++.|+.+
T Consensus 23 l~~~~g~~~~~~~-~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 23 MKTADNRPASVYL-KKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFS-SANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp CEETTSSBGGGGC-CTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGT-TSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred cCCCCCCEeeHHH-hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccC-CcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 6666666665432 35789999999999999999999999999987542 3555555432
Q ss_pred --------ccc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 234 --------VNE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 234 --------~~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
.+. .+.|+|.++|+++++.++++....+.|..+.+.|.++|++...
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred CcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 111 1678999999999997777767788999999999999998764
No 213
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.32 E-value=1.5e-13 Score=106.51 Aligned_cols=88 Identities=16% Similarity=0.210 Sum_probs=71.4
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ..++ +.+.|+.||++ ++..++++|||
T Consensus 46 ~k~vvv~f~a~wC~~C~~~~~~l~~l-------------------------~~~~-~~v~~~~v~~~--~~~~~~~~~~v 97 (139)
T 3d22_A 46 GKIVLANFSARWCGPSRQIAPYYIEL-------------------------SENY-PSLMFLVIDVD--ELSDFSASWEI 97 (139)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHC-TTSEEEEEETT--TSHHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHC-CCCEEEEEeCc--ccHHHHHHcCC
Confidence 34678889999999999988877666 2333 35889999999 88999999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
. ++||+++|..|.....+. |. +.++|.+++.+.+.+
T Consensus 98 ~--~~Pt~~~~~~G~~~~~~~---G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 98 K--ATPTFFFLRDGQQVDKLV---GA-NKPELHKKITAILDS 133 (139)
T ss_dssp C--EESEEEEEETTEEEEEEE---SC-CHHHHHHHHHHHHHT
T ss_pred C--cccEEEEEcCCeEEEEEe---CC-CHHHHHHHHHHHhcc
Confidence 8 999999998776555553 44 789999999998764
No 214
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.32 E-value=3.3e-12 Score=107.22 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=76.6
Q ss_pred cChhHHH-hc-CCCcEEEEEECC-CChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--ccc--ccCCcccccEEEEEe
Q psy7938 180 SNFDEIA-FD-KSKHVLVEFYAP-WCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--NEL--EHTKITSFPTLKLYA 252 (305)
Q Consensus 180 ~~f~~~v-~~-~~~~~lv~f~~~-~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--~~~--~~~~i~~~Ptl~~f~ 252 (305)
+.+.+.+ .+ .+..+++.||++ ||++|+.+.|.|+++++. .+++.++.+|++. +.. .+|+|+++||+++|+
T Consensus 10 ~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~---~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~ 86 (226)
T 1a8l_A 10 KVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL---TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQ 86 (226)
T ss_dssp HHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT---CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh---CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEc
Confidence 3444444 22 344577999999 999999999999999864 2579999999997 543 899999999999998
Q ss_pred CCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 253 KDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 253 ~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+|+....+|.|..+.+.+.+|+...
T Consensus 87 ~g~~~~~~~~G~~~~~~l~~~l~~~ 111 (226)
T 1a8l_A 87 DGKDFGVRYFGLPAGHEFAAFLEDI 111 (226)
T ss_dssp TTBCCSEEEESCCCTTHHHHHHHHH
T ss_pred CCceeeEEEeccCcHHHHHHHHHHH
Confidence 8765358899998888999998874
No 215
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.31 E-value=1.3e-11 Score=94.45 Aligned_cols=87 Identities=24% Similarity=0.394 Sum_probs=72.6
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----------------------------c--ccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----------------------------N--ELE 238 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----------------------------~--~~~ 238 (305)
.+++++|.||++||++|+.+.+.+.++++.+. .++.++.+++.. + ..+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 98 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAG--DDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLE 98 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT--TTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC--CCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHH
Confidence 47899999999999999999999999999863 468888884321 1 126
Q ss_pred cCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 239 HTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 239 ~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
.|++.++|++++++++++....+.|..+.+.|.++|++.
T Consensus 99 ~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 99 TYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred HcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 789999999999987777678899999999999999864
No 216
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.31 E-value=1.7e-13 Score=105.49 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=68.4
Q ss_pred HHHHHhhhhhcCcccccccccceee--eecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeC---CchhHHHH
Q psy7938 32 TVRSFVTEFLAGNLKHSKFKKNLYI--HLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINT---DEEDHQKI 106 (305)
Q Consensus 32 ~~~~~iv~f~a~wc~~c~~~~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~---~~~~~~~l 106 (305)
+.+++++.||++||++|+.+.|.+. ++. ..+++.+.++.||+ + ++.++
T Consensus 28 ~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~-------------------------~~~~~~~~~~~vd~~~~~--~~~~l 80 (133)
T 3fk8_A 28 THKPTLLVFGANWCTDCRALDKSLRNQKNT-------------------------ALIAKHFEVVKIDVGNFD--RNLEL 80 (133)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHTSHHHH-------------------------HHHHHHCEEEEEECTTTT--SSHHH
T ss_pred cCCcEEEEEcCCCCHHHHHHHHHhCCHHHH-------------------------HHhcCCEEEEEEeCCccc--chHHH
Confidence 3456788899999999999988776 441 22235689999999 7 78899
Q ss_pred HHHcCC---CCCCCCeEEEEe-cCcCceeccCC----CCCCCHHHHHHHHHHHH
Q psy7938 107 LEFFGM---SKDEVPSLRLIR-LEEDMAKYKPA----TPEISVDTVRSFVTEFL 152 (305)
Q Consensus 107 ~~~~~I---~~~~~Ptl~~~~-~~~~~~~~~~~----~~~~~~~~l~~fv~~~~ 152 (305)
+++||| . ++||+++|+ .|+....+.+. ....+.+++.+|+....
T Consensus 81 ~~~~~v~~~~--~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 81 SQAYGDPIQD--GIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKIT 132 (133)
T ss_dssp HHHTTCGGGG--CSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHHH
T ss_pred HHHhCCccCC--ccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHhc
Confidence 999999 8 999999995 45443343210 01468899999998763
No 217
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.31 E-value=6.5e-12 Score=98.44 Aligned_cols=94 Identities=21% Similarity=0.378 Sum_probs=78.9
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------------------------c-ccCCcc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------------------------L-EHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------------------------~-~~~~i~ 243 (305)
.+++++|.||++||++|+.+.+.+.++.+.+.+ .++.++.|+++.+. . +.|++.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 107 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAG-KDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN 107 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTT-SSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhcc-CCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC
Confidence 468999999999999999999999999999964 46888888877653 2 678999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
++|++++++++++....+.|..+.+.|.++|++.......
T Consensus 108 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 108 GIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp SSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCCSS
T ss_pred CCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccccc
Confidence 9999999997777677788988999999999987654443
No 218
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.31 E-value=1.4e-11 Score=97.31 Aligned_cols=91 Identities=16% Similarity=0.275 Sum_probs=76.1
Q ss_pred CCCcEEEEEECCCChhhhhH-HHHHHHHHHHhCCCCceEEEEEeCCc----------------------------c----
Q psy7938 189 KSKHVLVEFYAPWCGHCKQL-APIYDKLGEKFADRDDITIAKIDATV----------------------------N---- 235 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~id~~~----------------------------~---- 235 (305)
.+++++|.||++||++|+.. .|.+.++++.+++ .++.++.|+++. .
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 105 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE-DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGA 105 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT-TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc-CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchh
Confidence 47899999999999999996 9999999999974 368888887531 1
Q ss_pred ---ccccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 236 ---ELEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 236 ---~~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
..+.|++.++|+++++.++++...++.|..+.+.|.++|++....
T Consensus 106 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 106 MPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHTS
T ss_pred hHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 126789999999999988877678899999999999999887543
No 219
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.31 E-value=1.9e-11 Score=96.66 Aligned_cols=91 Identities=15% Similarity=0.223 Sum_probs=76.0
Q ss_pred CCCcEEEEEECCCChhhhh-HHHHHHHHHHHhCCCCceEEEEEeCC----------------------------c--c--
Q psy7938 189 KSKHVLVEFYAPWCGHCKQ-LAPIYDKLGEKFADRDDITIAKIDAT----------------------------V--N-- 235 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~-~~~~~~~la~~~~~~~~v~~~~id~~----------------------------~--~-- 235 (305)
.+++++|.||++||++|+. +.|.+.++++.+++. ++.++.|+++ . .
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~-~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 107 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDES-QVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQ 107 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTT-TEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcC-CcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccc
Confidence 4789999999999999999 699999999999753 5888888752 1 1
Q ss_pred ----ccccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 236 ----ELEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 236 ----~~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
....|+|.++|++++++++++...++.|..+.+.|.++|++....
T Consensus 108 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 108 RIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHTC
T ss_pred hhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHhc
Confidence 125789999999999988777788899999999999999887543
No 220
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.31 E-value=2.3e-13 Score=95.96 Aligned_cols=80 Identities=9% Similarity=0.025 Sum_probs=64.2
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE 116 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~ 116 (305)
++.||++||++|+.+.|.+.++ ..++.+.+.|+.+|++ ++.+++++|||. +
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~vd~~--~~~~~~~~~~v~--~ 55 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEA-------------------------KKEFGDKIDVEKIDIM--VDREKAIEYGLM--A 55 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHH-------------------------HHHHCSSCCEEEECTT--TCGGGGGGTCSS--C
T ss_pred EEEEECCCCcchHHHHHHHHHH-------------------------HHHhcCCeEEEEEECC--CCHHHHHhCCce--e
Confidence 5689999999999998877666 3344567999999999 778899999998 9
Q ss_pred CCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 117 VPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 117 ~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
+||+++ .|+. ++. |..+.++|.+++.+.+
T Consensus 56 ~Pt~~~--~G~~--~~~---G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 56 VPAIAI--NGVV--RFV---GAPSREELFEAINDEM 84 (85)
T ss_dssp SSEEEE--TTTE--EEE---CSSCCHHHHHHHHHHC
T ss_pred eCEEEE--CCEE--EEc---cCCCHHHHHHHHHHHh
Confidence 999998 4432 342 5668899999998764
No 221
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.31 E-value=3.3e-13 Score=101.75 Aligned_cols=86 Identities=14% Similarity=0.284 Sum_probs=68.8
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ +..+ +.+.|+.||++ ++..++++|+|
T Consensus 23 ~~~vlv~f~a~wC~~C~~~~~~l~~l-------------------------~~~~-~~v~~~~vd~~--~~~~~~~~~~i 74 (118)
T 2f51_A 23 PGLVLVDFFATWCGPCQRLGQILPSI-------------------------AEAN-KDVTFIKVDVD--KNGNAADAYGV 74 (118)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHC-TTSEEEEEETT--TCHHHHHHTTC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHH-------------------------HHHC-CCeEEEEEECC--CCHHHHHhcCC
Confidence 35678899999999999888887666 2333 56899999999 88999999999
Q ss_pred CCCCCCeEEEEec----CcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRL----EEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 113 ~~~~~Ptl~~~~~----~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
. ++||+++|+. |....++. | ...++|++.+..+.
T Consensus 75 ~--~~Pt~~~~~~~~~~G~~~~~~~---G-~~~~~l~~~~~~~~ 112 (118)
T 2f51_A 75 S--SIPALFFVKKEGNEIKTLDQFV---G-ADVSRIKADIEKFK 112 (118)
T ss_dssp C--SSSEEEEEEEETTEEEEEEEEE---S-CCHHHHHHHHHHHC
T ss_pred C--CCCEEEEEeCCCCcceEEEeec---C-CCHHHHHHHHHHhh
Confidence 8 9999999987 55444553 3 44567999998874
No 222
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.30 E-value=3e-13 Score=95.33 Aligned_cols=79 Identities=11% Similarity=0.085 Sum_probs=63.8
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE 116 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~ 116 (305)
++.||++||++|+.+.|.+.++ ..++.+.+.|+.+|++ ++.+++++|||. +
T Consensus 6 vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~vd~~--~~~~~~~~~~v~--~ 56 (85)
T 1fo5_A 6 IELFTSPMCPHCPAAKRVVEEV-------------------------ANEMPDAVEVEYINVM--ENPQKAMEYGIM--A 56 (85)
T ss_dssp EEEEECCCSSCCCTHHHHHHHH-------------------------HHHCSSSEEEEEEESS--SSCCTTTSTTTC--C
T ss_pred EEEEeCCCCCchHHHHHHHHHH-------------------------HHHcCCceEEEEEECC--CCHHHHHHCCCc--c
Confidence 6789999999999998877766 3444567999999999 777899999998 9
Q ss_pred CCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 117 VPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 117 ~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
+||+++ .|+. .+ .|..+.+++.+++.+.
T Consensus 57 ~Pt~~~--~G~~--~~---~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 57 VPTIVI--NGDV--EF---IGAPTKEALVEAIKKR 84 (85)
T ss_dssp SSEEEE--TTEE--EC---CSSSSSHHHHHHHHHH
T ss_pred cCEEEE--CCEE--ee---ecCCCHHHHHHHHHHh
Confidence 999998 4422 34 3667889999999875
No 223
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.30 E-value=3.6e-13 Score=101.06 Aligned_cols=87 Identities=10% Similarity=0.220 Sum_probs=70.8
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+. .+.|+.||++ ++..++++|+|
T Consensus 28 ~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~-~~~~~~v~~~--~~~~~~~~~~v 79 (118)
T 2vm1_A 28 GKLVIIDFTASWCGPCRVIAPVFAEY-------------------------AKKFP-GAIFLKVDVD--ELKDVAEAYNV 79 (118)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHH-------------------------HHHCT-TSEEEEEETT--TSHHHHHHTTC
T ss_pred CCEEEEEEECCCCHhHHHHhHHHHHH-------------------------HHHCC-CcEEEEEEcc--cCHHHHHHcCC
Confidence 35678889999999999888877666 23333 5889999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|.....+. | .+.++|.+++.+.+.
T Consensus 80 ~--~~Pt~~~~~~g~~~~~~~---g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 80 E--AMPTFLFIKDGEKVDSVV---G-GRKDDIHTKIVALMG 114 (118)
T ss_dssp C--SBSEEEEEETTEEEEEEE---S-CCHHHHHHHHHHHHC
T ss_pred C--cCcEEEEEeCCeEEEEec---C-CCHHHHHHHHHHHhc
Confidence 8 999999998776555552 4 578999999999874
No 224
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.30 E-value=6.1e-14 Score=128.91 Aligned_cols=117 Identities=8% Similarity=0.065 Sum_probs=80.8
Q ss_pred cCceecCCCCCCCChhH--HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 16 EDMAKYKPATPEINVDT--VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~--~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
..++.++.++|+..+.. .+++++.|||+||++|+.+.|.+.+++..+..-.. ....+.|.|
T Consensus 23 ~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g-----------------~~~~~~v~f 85 (470)
T 3qcp_A 23 SSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHG-----------------KDALQIATA 85 (470)
T ss_dssp TTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSC-----------------SSGGGGCEE
T ss_pred CCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcc-----------------cccCceEEE
Confidence 45777877777755433 36799999999999999999999888444421000 000026999
Q ss_pred EEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC--ceeccCC---------CCCCCHHHHHHHHHHHHc
Q psy7938 94 VTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED--MAKYKPA---------TPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 94 ~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~--~~~~~~~---------~~~~~~~~l~~fv~~~~~ 153 (305)
++|||+ ++.++|++|+|. ++||+++|+.++. ...|.+. ...++.+++...++..++
T Consensus 86 ~~VD~d--~~~~la~~y~V~--~~PTlilf~~gg~~~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Lin 152 (470)
T 3qcp_A 86 AAVNCA--SEVDLCRKYDIN--FVPRLFFFYPRDSCRSNEECGTSSLEHVAFENSHLEVDELESEVRRLVN 152 (470)
T ss_dssp EEEETT--TCHHHHHHTTCC--SSCEEEEEEESSCCCTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHH
T ss_pred EEEECC--CCHHHHHHcCCC--ccCeEEEEECCCceEEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 999999 889999999998 9999999986643 3344321 112556666666665543
No 225
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.29 E-value=5e-13 Score=99.47 Aligned_cols=87 Identities=15% Similarity=0.236 Sum_probs=69.9
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+. .+.|+.||++ ++..++++|||
T Consensus 26 ~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~-~v~~~~v~~~--~~~~~~~~~~v 77 (113)
T 1ti3_A 26 QKLIVVDFTASWCPPCKMIAPIFAEL-------------------------AKKFP-NVTFLKVDVD--ELKAVAEEWNV 77 (113)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHH-------------------------HHHCS-SEEEEEEETT--TCHHHHHHHHC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHH-------------------------HHhCC-CcEEEEEEcc--ccHHHHHhCCC
Confidence 35678889999999999888777666 23333 6999999999 88899999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++||+++|+.|....++. | .+.++|.+++.+.+.
T Consensus 78 ~--~~Pt~~~~~~G~~~~~~~---g-~~~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 78 E--AMPTFIFLKDGKLVDKTV---G-ADKDGLPTLVAKHAT 112 (113)
T ss_dssp S--STTEEEEEETTEEEEEEE---C-CCTTHHHHHHHHHHH
T ss_pred C--cccEEEEEeCCEEEEEEe---c-CCHHHHHHHHHHhhc
Confidence 8 999999998776545553 4 577899999988763
No 226
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.29 E-value=2.3e-13 Score=104.17 Aligned_cols=95 Identities=8% Similarity=0.036 Sum_probs=70.1
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+..... + + ..++..+.++.||++..++..++++|||
T Consensus 27 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~-~-------------------~--~~~~~~~~~~~vd~~~~~~~~~~~~~~v 84 (130)
T 2kuc_A 27 DKLLFVDCFTTWCGPCKRLSKVVFKDSL-V-------------------A--DYFNRHFVNLKMDMEKGEGVELRKKYGV 84 (130)
T ss_dssp SSCEEEEECCTTCTHHHHHHHHGGGCHH-H-------------------H--HHHHHHSEEEEECSSSTTHHHHHHHTTC
T ss_pred CCeEEEEEECCCCccHHHHHHHhcCcHH-H-------------------H--HHHhcCeEEEEEecCCcchHHHHHHcCC
Confidence 4578889999999999988776622100 0 0 1112457789999985567899999999
Q ss_pred CCCCCCeEEEEe-cCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 113 SKDEVPSLRLIR-LEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 113 ~~~~~Ptl~~~~-~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
. ++||+++|+ .|+...++ .|..+.++|.+++.+.+..
T Consensus 85 ~--~~Pt~~~~d~~G~~~~~~---~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 85 H--AYPTLLFINSSGEVVYRL---VGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp C--SSCEEEEECTTSCEEEEE---ESCCCHHHHHHHHHHHHSC
T ss_pred C--CCCEEEEECCCCcEEEEe---cCCCCHHHHHHHHHHHHHh
Confidence 8 999999995 45444445 3677899999999998754
No 227
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=99.29 E-value=7.3e-13 Score=109.05 Aligned_cols=118 Identities=14% Similarity=0.290 Sum_probs=81.8
Q ss_pred hHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccC
Q psy7938 102 DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASN 181 (305)
Q Consensus 102 ~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~ 181 (305)
.+.+.++.+||+ +.|++++ +| +|....+..+.+++.+|+++++. +.+++.++++|.. ... ...+.+
T Consensus 38 ~~~~~a~~~gi~--gvP~fvi--ng----k~~~~~~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~-~~~---~~~g~~ 103 (197)
T 1un2_A 38 QQEKAAADVQLR--GVPAMFV--NG----KYQLNPQGMDTSNMDVFVQQYAD--TVKYLSEKKGGGT-GAQ---YEDGKQ 103 (197)
T ss_dssp HHHHHHHHTTCC--SSSEEEE--TT----TEEECGGGSCCSSHHHHHHHHHH--HHHHHTC-------------CCBTTT
T ss_pred HHHHHHHHcCCC--cCCEEEE--cc----eEecCccccccccHHHHHHHHHH--HHHHHHhCccccc-ccc---cCCCCC
Confidence 445678999998 9999976 22 33322234555678888888876 7788888888875 221 234566
Q ss_pred hhHHHh-cCCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCcc
Q psy7938 182 FDEIAF-DKSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVN 235 (305)
Q Consensus 182 f~~~v~-~~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~ 235 (305)
|..+.. .+.++++|.||+.||+||+.+.|.| +++++.+. +++.|.+++.+.+
T Consensus 104 y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~--~~v~~~~~~v~~~ 159 (197)
T 1un2_A 104 YTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP--EGVKMTKYHVNFM 159 (197)
T ss_dssp EEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC--TTCCEEEEECSSS
T ss_pred ceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCC--CCCEEEEeccCcC
Confidence 665442 3467999999999999999999999 99999985 3788888888754
No 228
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.27 E-value=2.7e-11 Score=94.85 Aligned_cols=95 Identities=18% Similarity=0.357 Sum_probs=75.1
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------c-ccCCccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------L-EHTKITS 244 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------~-~~~~i~~ 244 (305)
.+++++|.||++||++|+.+.+.+.++++.++.. ++.++.|+++.+. . +.|++.+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 105 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAK-GFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKG 105 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGG-TEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcC-CeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCC
Confidence 4789999999999999999999999999999753 4778777776543 1 5689999
Q ss_pred ccEEEEEeCCCceEEeeeCC--CCHHHHHHHHHhcCCCCCCC
Q psy7938 245 FPTLKLYAKDDNRVIDYNGE--RVLEALSNFVESGGKEGGLP 284 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~g~--~~~~~l~~fi~~~~~~~~~~ 284 (305)
+|+++++.++++....+.|. .+.+.|.++|++.......+
T Consensus 106 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~~ 147 (152)
T 3gl3_A 106 MPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEGH 147 (152)
T ss_dssp SSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC-----
T ss_pred CCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHcccccc
Confidence 99999998777767788885 45689999999987655443
No 229
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.27 E-value=3.3e-11 Score=93.47 Aligned_cols=84 Identities=14% Similarity=0.254 Sum_probs=68.5
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHH---HHHHhCCCCceEEEEEeCCccc--------------------------ccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDK---LGEKFADRDDITIAKIDATVNE--------------------------LEH 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~---la~~~~~~~~v~~~~id~~~~~--------------------------~~~ 239 (305)
.+++++|.||++||++|+.+.|.+.+ +.+.+++ .++.++.|+.+.+. ...
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~-~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 108 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAA-KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNL 108 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHT-TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhcc-CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhh
Confidence 36899999999999999999999999 9999965 47888888876651 357
Q ss_pred CCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 240 TKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 240 ~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
|+|.++|++++++++++...+.. +.+.|.+||++
T Consensus 109 ~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~e 142 (142)
T 3eur_A 109 YDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLAE 142 (142)
T ss_dssp SCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHHC
T ss_pred cCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHhC
Confidence 89999999999998887444433 47888888864
No 230
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.27 E-value=5.5e-13 Score=112.86 Aligned_cols=107 Identities=14% Similarity=0.207 Sum_probs=80.9
Q ss_pred cCceecCCCCCCCChhHHHHHhhhhhc--CcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEE
Q psy7938 16 EDMAKYKPATPEINVDTVRSFVTEFLA--GNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLF 93 (305)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~iv~f~a--~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 93 (305)
..++.++..+|+..+.+...++|+||| |||+ +.|.|.+++..++ . .+.|.|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~----------------------~-~~~v~~ 57 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSA----------------------S-SDDLLV 57 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHT----------------------T-CTTEEE
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhc----------------------C-CCCeEE
Confidence 346667666666545556789999999 9999 7788888844331 1 256999
Q ss_pred EEEeCCc---hhHHHHHHHcCCCCCCCCeEEEEecCc--CceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 94 VTINTDE---EDHQKILEFFGMSKDEVPSLRLIRLEE--DMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 94 ~~vd~~~---~~~~~l~~~~~I~~~~~Ptl~~~~~~~--~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
++|||++ .++.++|++|+|..+++||+++|..|. ....| .|.++.+.|.+|+.+..
T Consensus 58 akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y---~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 58 AEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPY---TGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp EEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEEC---CSCSCHHHHHHHHHHTT
T ss_pred EEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceee---cCCCCHHHHHHHHHHhc
Confidence 9999652 158999999999533799999999886 34566 37899999999999884
No 231
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.27 E-value=9.4e-13 Score=101.77 Aligned_cols=85 Identities=9% Similarity=0.042 Sum_probs=66.8
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMS 113 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~ 113 (305)
+.+++.|||+||++|+.+.|.+.++ +.++ ..+.|+.||++ ++. ++|+|.
T Consensus 31 ~~vvv~f~a~wC~~C~~~~p~l~~l-------------------------a~~~-~~v~~~~vd~~--~~~---~~~~i~ 79 (135)
T 2dbc_A 31 LWVVIHLYRSSVPMCLVVNQHLSVL-------------------------ARKF-PETKFVKAIVN--SCI---EHYHDN 79 (135)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHH-------------------------HHHC-SSEEEEEECCS--SSC---SSCCSS
T ss_pred CEEEEEEECCCChHHHHHHHHHHHH-------------------------HHHC-CCcEEEEEEhh--cCc---ccCCCC
Confidence 4688999999999999999888776 2333 45999999999 432 789998
Q ss_pred CCCCCeEEEEecCcCceeccCCC----CCCCHHHHHHHHHHH
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPAT----PEISVDTVRSFVTEF 151 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~~----~~~~~~~l~~fv~~~ 151 (305)
++||+++|+.|+.+.++.+.. ..++.++|.+++.+.
T Consensus 80 --~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 80 --CLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp --CCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred --CCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999999999887666664321 124789999999987
No 232
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.27 E-value=2.2e-11 Score=95.48 Aligned_cols=92 Identities=17% Similarity=0.330 Sum_probs=74.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC-----------------------ccc--cccCCcc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT-----------------------VNE--LEHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~-----------------------~~~--~~~~~i~ 243 (305)
.+++++|.||++||++|+.+.+.+.++++.++. .++.++.++.+ .+. .+.|++.
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~ 105 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN-KNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQ 105 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG-TTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc-CCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCC
Confidence 578999999999999999999999999999974 35777666532 111 2678999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCCC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKEG 281 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~~ 281 (305)
++|+++++.++++....+.|..+.+.|.++|++.....
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 106 VYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp SSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred ccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 99999999777666778999999999999999865433
No 233
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.26 E-value=9.8e-13 Score=101.43 Aligned_cols=88 Identities=10% Similarity=0.106 Sum_probs=66.3
Q ss_pred HHHhhhhhcCccccccccccee---eeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc--hhHHHHHH
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLY---IHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE--EDHQKILE 108 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~l~~ 108 (305)
+.+++.||++||++|+.+.|.+ .++ ...+++ +.++.||++. ..+..+++
T Consensus 32 k~vlv~F~a~wC~~C~~~~~~~~~~~~l-------------------------~~~~~~-~~~~~vd~~~~~~~~~~l~~ 85 (134)
T 2fwh_A 32 KPVMLDLYADWCVACKEFEKYTFSDPQV-------------------------QKALAD-TVLLQANVTANDAQDVALLK 85 (134)
T ss_dssp SCEEEEEECTTCHHHHHHHHHTTTSHHH-------------------------HHHTTT-SEEEEEECTTCCHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHHHHHHhcCCHHH-------------------------HHHhcC-cEEEEEeCCCCcchHHHHHH
Confidence 5688899999999999877665 333 123334 8899999953 37789999
Q ss_pred HcCCCCCCCCeEEEEec-CcCc--eeccCCCCCCCHHHHHHHHHHHH
Q psy7938 109 FFGMSKDEVPSLRLIRL-EEDM--AKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 109 ~~~I~~~~~Ptl~~~~~-~~~~--~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
+|||. ++||+++|+. |+.+ .++ .|..+.++|.+++...-
T Consensus 86 ~~~v~--~~Pt~~~~d~~G~~v~~~~~---~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 86 HLNVL--GLPTILFFDGQGQEHPQARV---TGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp HTTCC--SSSEEEEECTTSCBCGGGCB---CSCCCHHHHHHHHHHC-
T ss_pred HcCCC--CCCEEEEECCCCCEeeeeee---eeccCHHHHHHHHHhcC
Confidence 99998 9999999954 4332 234 37889999999998763
No 234
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.25 E-value=1.8e-13 Score=102.15 Aligned_cols=95 Identities=5% Similarity=-0.093 Sum_probs=67.0
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
++....+|+|||+||++|+.+.+.+... +.. . .+ ...+.+++||.+.....+++.++
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~---~~~----------------~--a~--~~~~~l~~vdv~~~~~~~la~~~ 72 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQ---YPL----------------T--DE--GRAAPVQRLQMRDPLPPGLELAR 72 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTT---GGG----------------S--HH--HHHSCEEEEETTSCCCTTCBCSS
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhh---HHH----------------h--hh--cccceEEEEECCCCCchhHHHHC
Confidence 4456679999999999999886422211 100 0 00 01256778888843346789999
Q ss_pred CCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 111 GMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+|. +.|||++|+.|+.+.++ .|....+.+..++...+.
T Consensus 73 ~V~--g~PT~i~f~~G~ev~Ri---~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 73 PVT--FTPTFVLMAGDVESGRL---EGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp CCC--SSSEEEEEETTEEEEEE---ECCCCHHHHHHHHHHHHH
T ss_pred CCC--CCCEEEEEECCEEEeee---cCCCCHHHHHHHHHHHHh
Confidence 998 99999999988877777 378899999999998764
No 235
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.25 E-value=2.9e-11 Score=94.04 Aligned_cols=87 Identities=16% Similarity=0.309 Sum_probs=70.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc---------------------------cccCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE---------------------------LEHTK 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~---------------------------~~~~~ 241 (305)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++... ...|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 478999999999999999999999999999933346888888776532 27899
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+.++|+++++.++++....+. +.+.+.++|++..
T Consensus 112 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 999999999987776444443 8888999888754
No 236
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.24 E-value=5e-11 Score=93.53 Aligned_cols=91 Identities=16% Similarity=0.272 Sum_probs=74.5
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------ccccCCcc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------ELEHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~~~~~~i~ 243 (305)
.+++++|.||++||++|+.+.+.+.++++.+.+ .++.++.|+.+.+ ....|++.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 105 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAG-KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT 105 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc-CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC
Confidence 578999999999999999999999999999964 4688888887764 12568999
Q ss_pred cccEEEEEeCCCceEEeeeCCC--CHHHHHHHHHhcCCC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGER--VLEALSNFVESGGKE 280 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~--~~~~l~~fi~~~~~~ 280 (305)
++|+++++.++++....+.|.. +.+.+.++|++....
T Consensus 106 ~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 106 GVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSK 144 (154)
T ss_dssp SBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC---
T ss_pred CCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHH
Confidence 9999999988877677888865 677999999876543
No 237
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.24 E-value=1.7e-11 Score=97.94 Aligned_cols=99 Identities=13% Similarity=0.215 Sum_probs=72.6
Q ss_pred cEEe--cccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----------------
Q psy7938 174 VKVL--VASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----------------- 234 (305)
Q Consensus 174 v~~l--~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----------------- 234 (305)
+..+ ++..+.......+++++|.||++||++|+.+.|.++++++. ++.++.|+++.
T Consensus 33 l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~v~~~~~~~~~~~~~~~~~~~~~ 107 (168)
T 2b1k_A 33 LESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ-----GIRVVGMNYKDDRQKAISWLKELGNPYA 107 (168)
T ss_dssp EEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCCEEEEEESCCHHHHHHHHHHHCCCCS
T ss_pred eecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC-----CCEEEEEECCCChHHHHHHHHHcCCCCc
Confidence 4444 44444322224688999999999999999999999999875 34555555321
Q ss_pred ------cc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 235 ------NE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 235 ------~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+. ...|+|.++|+++++.++++....+.|..+.+.+.++|++.
T Consensus 108 ~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 108 LSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp EEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHH
T ss_pred eeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 11 26789999998888887777677889999999988887764
No 238
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.24 E-value=1.6e-11 Score=95.45 Aligned_cols=88 Identities=19% Similarity=0.268 Sum_probs=73.5
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc--------------------------c-ccCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE--------------------------L-EHTK 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~--------------------------~-~~~~ 241 (305)
.+++++|.||++||++|+.+.|.+.++.+.++.. ++.++.|+++.+. . ..|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAK-GIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGG-TEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccC-CEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 5789999999999999999999999999999753 5888888877432 3 6788
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+.++|+++++++++....++.|..+.+.+.+.+.+.
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 999999999988777678888888888877777653
No 239
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.24 E-value=7.5e-11 Score=93.20 Aligned_cols=89 Identities=19% Similarity=0.403 Sum_probs=74.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-------------------c-cc-ccCCcccccE
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-------------------N-EL-EHTKITSFPT 247 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-------------------~-~~-~~~~i~~~Pt 247 (305)
.+++++|.||++||++|+.+.+.+.++++.+.. .++.++.|+.+. + .. +.|++.++|+
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~ 118 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPK-GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPD 118 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSST-TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHccc-CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcce
Confidence 478999999999999999999999999999974 478999998876 1 22 7899999999
Q ss_pred EEEEeCCCceEEeeeCC--CCHHHHHHHHHhcC
Q psy7938 248 LKLYAKDDNRVIDYNGE--RVLEALSNFVESGG 278 (305)
Q Consensus 248 l~~f~~g~~~~~~~~g~--~~~~~l~~fi~~~~ 278 (305)
++++.++++...++.|. .+..++.+.++++.
T Consensus 119 ~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~ 151 (158)
T 3hdc_A 119 TFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLE 151 (158)
T ss_dssp EEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC
T ss_pred EEEEcCCCCEEEEEeCCCccchHHHHHHHHhhc
Confidence 99998888878888884 45677888777654
No 240
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.23 E-value=3.6e-11 Score=93.09 Aligned_cols=86 Identities=19% Similarity=0.399 Sum_probs=69.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHH---HHHHhCCCCceEEEEEeCCccc--------------------------ccc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDK---LGEKFADRDDITIAKIDATVNE--------------------------LEH 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~---la~~~~~~~~v~~~~id~~~~~--------------------------~~~ 239 (305)
.+++++|.||++||++|+.+.|.+.+ +.+.+++ .++.++.|+.+.+. ...
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 104 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN-GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQL 104 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH-TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc-CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHH
Confidence 47899999999999999999999988 8888864 35888888777443 127
Q ss_pred CCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 240 TKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 240 ~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
|+|.++|++++++++++ + .+ +..+.+.|.++|++..
T Consensus 105 ~~v~~~P~~~lid~~G~-i-~~-~~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 105 YDIRATPTIYLLDGRKR-V-IL-KDTSMEQLIDYLATQA 140 (142)
T ss_dssp SCCCSSSEEEEECTTCB-E-EE-CSCCHHHHHHHHHC--
T ss_pred cCCCCCCeEEEECCCCC-E-Ee-cCCCHHHHHHHHHHHc
Confidence 99999999999988776 2 23 5678999999998764
No 241
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.23 E-value=6e-12 Score=100.98 Aligned_cols=75 Identities=12% Similarity=0.229 Sum_probs=60.1
Q ss_pred ccChhHHHhcCCCcEEEEEECCCChhhhhHHHH-H--HHHHHHhCCCCceEEEEEeCCcccc--ccC--------Ccccc
Q psy7938 179 ASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPI-Y--DKLGEKFADRDDITIAKIDATVNEL--EHT--------KITSF 245 (305)
Q Consensus 179 ~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~-~--~~la~~~~~~~~v~~~~id~~~~~~--~~~--------~i~~~ 245 (305)
.+.|.... ..+++++|.||++||++|+.|.+. | .++++.+. .++++++||.+++.. ..| ++.++
T Consensus 29 ~ea~~~A~-~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~--~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~ 105 (173)
T 3ira_A 29 EEAFEKAR-KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN--EAFVSIKVDREERPDIDNIYMTVCQIILGRGGW 105 (173)
T ss_dssp HHHHHHHH-HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH--HHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCS
T ss_pred HHHHHHHH-HhCCCEEEecccchhHhhccccccccCCHHHHHHHH--hcCceeeeCCcccCcHHHHHHHHHHHHcCCCCC
Confidence 45565544 568999999999999999999983 3 57777773 379999999987653 455 89999
Q ss_pred cEEEEEeCCCc
Q psy7938 246 PTLKLYAKDDN 256 (305)
Q Consensus 246 Ptl~~f~~g~~ 256 (305)
||+++|+++++
T Consensus 106 Pt~v~l~~dG~ 116 (173)
T 3ira_A 106 PLNIIMTPGKK 116 (173)
T ss_dssp SEEEEECTTSC
T ss_pred cceeeECCCCC
Confidence 99999987666
No 242
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.23 E-value=2.2e-12 Score=95.34 Aligned_cols=76 Identities=13% Similarity=0.041 Sum_probs=57.6
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc--h--hHHHHHH
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE--E--DHQKILE 108 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~--~~~~l~~ 108 (305)
-+..++.|||+||++|+.+.|.|.+++..+ . .|||+. . ++.++|+
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~-------------------------~------~v~~~~~~~~~~~~~l~~ 60 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQV-------------------------P------YVECSPNGPGTPQAQECT 60 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGS-------------------------C------EEESCTTCTTSCCCHHHH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhC-------------------------C------EEEEecccccchhHHHHH
Confidence 456788999999999999999998884322 1 445552 1 4678999
Q ss_pred HcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHH
Q psy7938 109 FFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVT 149 (305)
Q Consensus 109 ~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~ 149 (305)
+|||. ++||+++ .| ..| .|.++.++|.+|+.
T Consensus 61 ~~~V~--~~PT~~i--~G---~~~---~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 61 EAGIT--SYPTWII--NG---RTY---TGVRSLEALAVASG 91 (106)
T ss_dssp HTTCC--SSSEEEE--TT---EEE---ESCCCHHHHHHHHT
T ss_pred HcCCe--EeCEEEE--CC---EEe---cCCCCHHHHHHHhC
Confidence 99998 9999877 44 245 37889999998874
No 243
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.22 E-value=6.4e-13 Score=101.50 Aligned_cols=88 Identities=11% Similarity=0.250 Sum_probs=70.2
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
.+.+++.||++||++|+.+.|.+.++ ...+. .+.|+.||++ ++..++++|+|
T Consensus 36 ~~~~vv~f~~~~C~~C~~~~~~l~~~-------------------------~~~~~-~v~~~~v~~~--~~~~~~~~~~v 87 (130)
T 1wmj_A 36 GKVVIIDFTASWCGPCRFIAPVFAEY-------------------------AKKFP-GAVFLKVDVD--ELKEVAEKYNV 87 (130)
T ss_dssp TCBCBEECCSSSCSCSSSSHHHHHHH-------------------------HHHCT-TBCCEECCTT--TSGGGHHHHTC
T ss_pred CCEEEEEEECCCChhHHHHHHHHHHH-------------------------HHHCC-CCEEEEEecc--chHHHHHHcCC
Confidence 34678899999999999998877766 23333 5889999999 77889999999
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
. ++||+++|+.|+...++. | .+.++|.+++.+.+..
T Consensus 88 ~--~~Pt~~~~~~g~~~~~~~---g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 88 E--AMPTFLFIKDGAEADKVV---G-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp C--SSCCCCBCTTTTCCBCCC---T-TCTTTHHHHHHHHTSS
T ss_pred C--ccceEEEEeCCeEEEEEe---C-CCHHHHHHHHHHHHhc
Confidence 8 999999997776544442 4 5778999999998754
No 244
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.21 E-value=2.6e-11 Score=89.13 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=64.3
Q ss_pred CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHH
Q psy7938 191 KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLE 268 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~ 268 (305)
...++.|+++||++|+.+.+.+++++.++ ++.+..+|++.+.. .+|+++ +|++++|.+|.. + ..|..+.+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~----~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~--v-~~g~~~~~ 100 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS----WFELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKE--L-CHYFLDSD 100 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS----CCCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEE--E-ECSSCCCH
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc----CCeEEEEECCCCHHHHHHhCCC-CceEEEEECCEE--E-EecCCCHH
Confidence 36799999999999999999999999987 37788889887654 789997 999999987743 3 46888999
Q ss_pred HHHHHH
Q psy7938 269 ALSNFV 274 (305)
Q Consensus 269 ~l~~fi 274 (305)
.|.+||
T Consensus 101 ~L~~~L 106 (107)
T 2fgx_A 101 VIGAYL 106 (107)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999987
No 245
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.20 E-value=1.1e-10 Score=94.88 Aligned_cols=134 Identities=17% Similarity=0.308 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHcCccccccc---CCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHH
Q psy7938 141 VDTVRSFVTEFLAGNLKQHLL---SQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGE 217 (305)
Q Consensus 141 ~~~l~~fv~~~~~~~~~~~~~---s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~ 217 (305)
..++..++..+..|....... ..+.|.. .+..+++..+.-.- -.++.++|.||++||++|+.+.+.+.++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~f----~l~~~~G~~~~l~~-~~gk~vll~F~a~~C~~C~~~~~~l~~l~~ 87 (186)
T 1jfu_A 13 AVATAQKIAPLAHGEVAALTMASAPLKLPDL----AFEDADGKPKKLSD-FRGKTLLVNLWATWCVPCRKEMPALDELQG 87 (186)
T ss_dssp HHHHHHHHGGGCCGGGTTCEECCSCCBCCCC----EEECTTSCEEEGGG-GTTSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhhhcchhhcchhhhhccccCCCcCCCc----EeEcCCCCEeeHHH-cCCCEEEEEEEeCCCHhHHHHHHHHHHHHH
Confidence 456777777777666544432 2233321 13333333222111 147899999999999999999999999999
Q ss_pred HhCCCCceEEEEEeCCccc-------cccCCcc-----------------------cccEEEEEeCCCceEEeeeCCCC-
Q psy7938 218 KFADRDDITIAKIDATVNE-------LEHTKIT-----------------------SFPTLKLYAKDDNRVIDYNGERV- 266 (305)
Q Consensus 218 ~~~~~~~v~~~~id~~~~~-------~~~~~i~-----------------------~~Ptl~~f~~g~~~~~~~~g~~~- 266 (305)
.++. .++.++.|+.+... .+++++. ++|+++++.++++....+.|..+
T Consensus 88 ~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~ 166 (186)
T 1jfu_A 88 KLSG-PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEW 166 (186)
T ss_dssp HHCB-TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCT
T ss_pred Hhcc-CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCcc
Confidence 9963 46778778776541 1445553 89999999888776778888764
Q ss_pred -HHHHHHHHHhcCCC
Q psy7938 267 -LEALSNFVESGGKE 280 (305)
Q Consensus 267 -~~~l~~fi~~~~~~ 280 (305)
.+.+.++|++....
T Consensus 167 ~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 167 ASEDALKLIRAATGK 181 (186)
T ss_dssp TSHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHhcc
Confidence 78899999887643
No 246
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.20 E-value=9.2e-11 Score=93.28 Aligned_cols=85 Identities=28% Similarity=0.485 Sum_probs=71.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC------------------cc---------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT------------------VN--------------- 235 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~------------------~~--------------- 235 (305)
.+++++|.||++||++|+.+.|.+.++.+.++ ++.++.|+++ .+
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~---~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR---EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPS 112 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT---TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC---CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCC
Confidence 47899999999999999999999999999996 7888888876 22
Q ss_pred --------cc-ccCCcccccEEEEEeCCCceEEeeeCCC-CHHHHHHHHHhcC
Q psy7938 236 --------EL-EHTKITSFPTLKLYAKDDNRVIDYNGER-VLEALSNFVESGG 278 (305)
Q Consensus 236 --------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~g~~-~~~~l~~fi~~~~ 278 (305)
.. ..|+|.++|++++++++++ +.. .|.. +.+.|.++|++..
T Consensus 113 ~~~~~d~~~~~~~~~v~~~P~~~lid~~G~-i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 113 WIMVMDDGSLVEKFNVRSIDYIVIMDKSSN-VLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp SEEEECCSHHHHHTTCCSSSEEEEEETTCC-EEE-EEESCCHHHHHHHHHHC-
T ss_pred eeEEeChHHHHHHhCCCCceEEEEEcCCCc-EEE-eCCCCCHHHHHHHHHHHh
Confidence 22 6789999999999988777 333 8888 9999999998754
No 247
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.19 E-value=1.3e-12 Score=99.17 Aligned_cols=85 Identities=9% Similarity=0.092 Sum_probs=66.6
Q ss_pred HHHHhhhhhcC-------cccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeC-------
Q psy7938 33 VRSFVTEFLAG-------NLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINT------- 98 (305)
Q Consensus 33 ~~~~iv~f~a~-------wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~------- 98 (305)
.+++++.|||+ ||++|+.+.|.+.++ +.++++.+.|+.||+
T Consensus 24 ~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~-------------------------~~~~~~~~~~~~vd~~~~~~~~ 78 (123)
T 1wou_A 24 GKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREG-------------------------LKHISEGCVFIYCQVGEKPYWK 78 (123)
T ss_dssp TSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHH-------------------------GGGCCTTEEEEEEECCCHHHHH
T ss_pred CCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHH-------------------------HHHcCCCcEEEEEECCCchhhh
Confidence 46788899999 999999999988777 344446799999999
Q ss_pred CchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 99 DEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 99 ~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
+ .+..++++|+|. ++||+++|+.+.....+ ...+.+.|.+|+.+
T Consensus 79 d--~~~~~~~~~~i~--~~Pt~~~~~~~~~~~g~----~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 79 D--PNNDFRKNLKVT--AVPTLLKYGTPQKLVES----ECLQANLVEMLFSE 122 (123)
T ss_dssp C--TTCHHHHHHCCC--SSSEEEETTSSCEEEGG----GGGCHHHHHHHHHC
T ss_pred c--hhHHHHHHCCCC--eeCEEEEEcCCceEecc----ccCCHHHHHHHHhc
Confidence 6 677899999998 99999999875432222 23567788888763
No 248
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.19 E-value=1.3e-10 Score=91.07 Aligned_cols=87 Identities=28% Similarity=0.340 Sum_probs=68.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------c-c-ccCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------E-L-EHTK 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~-~-~~~~ 241 (305)
.+++++|.||++||++|+.+.|.+.++++.+.+ .++.++.|+++.. . . +.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD-KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT-TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc-CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC
Confidence 478999999999999999999999999999975 3588888887752 2 2 6899
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
|.++|++++++++++....+. +.+.+.++|++...
T Consensus 107 v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 107 IVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEKFVN 141 (152)
T ss_dssp CCSSCEEEEECTTSEEEEECC---CTTHHHHHHHHHHT
T ss_pred CCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHHHHh
Confidence 999999999987776444443 34567777766543
No 249
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.19 E-value=7.8e-11 Score=95.46 Aligned_cols=89 Identities=12% Similarity=0.226 Sum_probs=72.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCce------EEEEEeCCc-cc--ccc--------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDI------TIAKIDATV-NE--LEH-------------------- 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v------~~~~id~~~-~~--~~~-------------------- 239 (305)
.+++++|.||++||++|+.+.|.+.++++.++.. ++ .++.|+++. +. .+.
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 136 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA-GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTA 136 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC-C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc-CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHH
Confidence 4789999999999999999999999999998643 35 888888876 22 122
Q ss_pred -----CCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 240 -----TKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 240 -----~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+++.++|+++++.++++....+.|..+.+.|.++|++..
T Consensus 137 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 137 ASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 268999999999887776778999999999999998753
No 250
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.18 E-value=2.6e-11 Score=86.06 Aligned_cols=73 Identities=11% Similarity=0.110 Sum_probs=58.6
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHH
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALS 271 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~ 271 (305)
++.||++||++|+.+.|.+++++..+ +..+|++.++. .+|+++ +|++++ .+|+. . . |..+.+.|.
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-------~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~-v-~--g~~~~~~L~ 69 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-------FFSVFIDDDAALESAYGLR-VPVLRD-PMGRE-L-D--WPFDAPRLR 69 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-------EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCE-E-E--SCCCHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-------eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEE-E-e--CCCCHHHHH
Confidence 78899999999999999999886443 47788887665 789998 999998 55533 3 2 888999999
Q ss_pred HHHHhcCC
Q psy7938 272 NFVESGGK 279 (305)
Q Consensus 272 ~fi~~~~~ 279 (305)
+||.+...
T Consensus 70 ~~l~~~~~ 77 (87)
T 1ttz_A 70 AWLDAAPH 77 (87)
T ss_dssp HHHHTCC-
T ss_pred HHHHHHHH
Confidence 99987654
No 251
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.18 E-value=1e-10 Score=100.02 Aligned_cols=162 Identities=20% Similarity=0.296 Sum_probs=99.8
Q ss_pred CCeEEEEee-------ccCceecCCCCCCCChhHHHHHhhhhhcCccccccccc-ceeeeecccccccCCCCCcc--hhh
Q psy7938 6 VPSLRLIRL-------EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKK-NLYIHLEEDMAKYKPASPEI--NVD 75 (305)
Q Consensus 6 ~p~i~l~~~-------~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~-p~~~~~~~~~~~~~~~~~~~--~~~ 75 (305)
.|+|.|||. ++....|+ +++.+.+.+..||.....|.++.-..-. +.+......+..+..+..+. ..+
T Consensus 72 ~p~i~~fk~~~~~~kf~e~~~~y~--~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 72 GEGIILFRPSHLTNKFEDKTVAYT--EQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp SEEEEEECCGGGCCTTSCSEEECC--CSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHSSSSEEEEEECCBTTTBHHHHH
T ss_pred CCcEEEEcchhhcccccccccccC--CCCcCHHHHHHHHHhcccCCeeecccccHhhhcCCCeEEEEeecchhhcchhHH
Confidence 488999984 45666772 3446888999999999999999885442 11111111111122222111 112
Q ss_pred hhhhH-HHHHhhcCce---EEEEEEeCCchhHHHHHHHcCC--CCCCCCeEEEEecCcCceeccCCCCCCCHHH--HHHH
Q psy7938 76 TVRSF-VTEFLAGNLK---VLFVTINTDEEDHQKILEFFGM--SKDEVPSLRLIRLEEDMAKYKPATPEISVDT--VRSF 147 (305)
Q Consensus 76 ~~~~~-~~~~~~~~~~---v~~~~vd~~~~~~~~l~~~~~I--~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~--l~~f 147 (305)
.+.+. ..-+++++++ +.|+.+|++ ++.++++.||+ ....+|++++++.. . .+|.+. +.++.+. |.+|
T Consensus 150 ~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~-~-~ky~~~-~~~t~~~~~i~~F 224 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAK-G-EKFVMQ-EEFSRDGKALERF 224 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTT-S-CEEECC-SCCCTTSHHHHHH
T ss_pred HHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCc-C-cEecCC-cccCcchHHHHHH
Confidence 33333 2222444455 999999999 78889999999 44589999999753 2 577665 5788888 9999
Q ss_pred HHHHHcCcccccccCCCCCCccccCCcE
Q psy7938 148 VTEFLAGNLKQHLLSQPLPEDWDKNAVK 175 (305)
Q Consensus 148 v~~~~~~~~~~~~~s~~~p~~~~~~~v~ 175 (305)
+.+++.|+++++++|+++|+. ++++|+
T Consensus 225 ~~~~~~Gkl~~~~kSe~iPe~-~~~pV~ 251 (252)
T 2h8l_A 225 LQDYFDGNLKRYLKSEPIPES-NDGAAA 251 (252)
T ss_dssp HHHHHHTCSCCCC---------------
T ss_pred HHHHHCCCccccccCCCCCCC-CCCCCC
Confidence 999999999999999999998 666664
No 252
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.18 E-value=6.4e-11 Score=93.04 Aligned_cols=85 Identities=20% Similarity=0.351 Sum_probs=68.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------cccCCcc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------LEHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------~~~~~i~ 243 (305)
.+++++|.||++||++|+.+.+.+.++++. +++.++.|+.+.+. ...|++.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~----~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 116 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD----KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVY 116 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC----TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc----CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcC
Confidence 378999999999999999999999988765 35777777654211 1568999
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
++|+++++.++++....+.|..+.+.|.++|++.
T Consensus 117 ~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 117 GVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp SSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred ccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 9999888877777677899999999999988764
No 253
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.17 E-value=3.6e-10 Score=106.67 Aligned_cols=135 Identities=13% Similarity=0.178 Sum_probs=98.2
Q ss_pred CCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHhcCCCcEE
Q psy7938 116 EVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVL 194 (305)
Q Consensus 116 ~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~l 194 (305)
..|++.+.+.|+. ..+|. |--.-.++..|+...+.-. +.-..++.+.++.+........+
T Consensus 61 ~~p~~~~~~~~~~~~i~f~---g~p~g~e~~s~~~~l~~~~----------------~~~~~~~~~~~~~i~~~~~~~~i 121 (521)
T 1hyu_A 61 RKPSFLITNPGSQQGPRFA---GSPLGHEFTSLVLALLWTG----------------GHPSKEAQSLLEQIRDIDGDFEF 121 (521)
T ss_dssp CSSEEEEECTTCCCSCEEE---SCCCGGGHHHHHHHHHHHT----------------TCCCCSCHHHHHHHHHCCSCEEE
T ss_pred CCCEEEEecCCCcceEEEe---ccCcchhHHHHHHHHHhhc----------------CCCCCCCHHHHHHHHhcCCCcce
Confidence 6799999976642 34554 3334466888887765311 01123344555555434466789
Q ss_pred EEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc--ccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHH
Q psy7938 195 VEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL--EHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSN 272 (305)
Q Consensus 195 v~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~ 272 (305)
+.||++||++|+.+.|.+++++..+. ++.+..+|.+.+.. .+++|.++||+++ +| + .+ ..|..+.+.|.+
T Consensus 122 ~~f~a~~C~~C~~~~~~l~~~a~~~~---~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g-~-~~-~~G~~~~~~l~~ 193 (521)
T 1hyu_A 122 ETYYSLSCHNCPDVVQALNLMAVLNP---RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG-K-EF-GQGRMTLTEIVA 193 (521)
T ss_dssp EEEECTTCSSHHHHHHHHHHHHHHCT---TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT-E-EE-EESCCCHHHHHH
T ss_pred EEEECCCCcCcHHHHHHHHHHHhHcC---ceEEEEEechhhHHHHHHhCCCccCEEEE--CC-E-EE-ecCCCCHHHHHH
Confidence 99999999999999999999999873 79999999887765 7999999999977 44 3 22 349999999999
Q ss_pred HHHhc
Q psy7938 273 FVESG 277 (305)
Q Consensus 273 fi~~~ 277 (305)
|+.+.
T Consensus 194 ~l~~~ 198 (521)
T 1hyu_A 194 KVDTG 198 (521)
T ss_dssp HHCCS
T ss_pred HHhhc
Confidence 98765
No 254
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.17 E-value=3.2e-10 Score=96.80 Aligned_cols=162 Identities=20% Similarity=0.258 Sum_probs=102.0
Q ss_pred CCCeEEEEee-------ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccc--eeeeecccccc--cCCC-CC--
Q psy7938 5 EVPSLRLIRL-------EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKN--LYIHLEEDMAK--YKPA-SP-- 70 (305)
Q Consensus 5 ~~p~i~l~~~-------~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p--~~~~~~~~~~~--~~~~-~~-- 70 (305)
..|+|.|||. ++....|+++ ++.+.+.+..||.....|.++.-..-+- ++. +..+.. +..+ ..
T Consensus 72 ~~p~ivlfk~~~~~~kfde~~~~y~g~-~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~--~~~l~~~~~~~d~~~~~ 148 (250)
T 3ec3_A 72 SLGKLVLMQPEKFQSKYEPRMHVMDVQ-GSTEASAIKDYVVKHALPLVGHRKTSNDAKRYS--KRPLVVVYYSVDFSFDY 148 (250)
T ss_dssp CSSEEEEECCGGGCCTTSCSCEEEECC-TTSCHHHHHHHHHHHSSCTEEEECTTTHHHHSC--SSSEEEEEECCCCSTTT
T ss_pred CCCeEEEEecchhhccccccceeccCC-CCCCHHHHHHHHHHcCCCceeecCccchhhhhc--cCccEEEEEeccccccc
Confidence 3589999995 5677778431 4567889999999999999988864321 121 122221 1111 11
Q ss_pred cchhhhhhhHHH-HHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCC-CeEEEEecCcCceeccCCCCCCCHHHHHHHH
Q psy7938 71 EINVDTVRSFVT-EFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEV-PSLRLIRLEEDMAKYKPATPEISVDTVRSFV 148 (305)
Q Consensus 71 ~~~~~~~~~~~~-~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~-Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv 148 (305)
.-....+.+.+. -+++++ ++.|+.+|++ ++.+.++.||++..++ |.+++++.. ..+|.+..+.++.+.|.+|+
T Consensus 149 ~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~--~~~~~l~~fgl~~~~~~p~~~~~~~~--~~ky~~~~~~~t~~~i~~Fv 223 (250)
T 3ec3_A 149 RTATQFWRNKVLEVAKDFP-EYTFAIADEE--DYATEVKDLGLSESGGDVNAAILDES--GKKFAMEPEEFDSDALREFV 223 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCT-TSEEEEEETT--TTHHHHHHTTCSSCSCSCEEEEECTT--SCEEECCCCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhhc-ceeEEEEcHH--HHHHHHHHcCCCccCCCcEEEEEcCC--CceecCCcccCCHHHHHHHH
Confidence 112233444433 346677 8999999998 7888899999974455 477777632 36887765678999999999
Q ss_pred HHHHcCcccccccCCCCCCccccCCcE
Q psy7938 149 TEFLAGNLKQHLLSQPLPEDWDKNAVK 175 (305)
Q Consensus 149 ~~~~~~~~~~~~~s~~~p~~~~~~~v~ 175 (305)
.+++.|+++++++|+++|+. ++++|.
T Consensus 224 ~~~~~Gkl~p~~kSepiPe~-~~~pV~ 249 (250)
T 3ec3_A 224 MAFKKGKLKPVIKSQPVPKN-NKGAAA 249 (250)
T ss_dssp HHHHTTCCCCCC---------------
T ss_pred HHHHCCCccceeecCCCCCC-CCCCCC
Confidence 99999999999999999998 566553
No 255
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.17 E-value=1.8e-12 Score=110.01 Aligned_cols=88 Identities=18% Similarity=0.273 Sum_probs=69.0
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGM 112 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I 112 (305)
...+|+.|||+||++|+.+.|.+..+ +.++.+ +.|++||++ + ..++..|+|
T Consensus 133 ~k~VvV~Fya~wC~~Ck~l~p~l~~L-------------------------a~~~~~-v~f~kVd~d--~-~~l~~~~~I 183 (245)
T 1a0r_P 133 ITTIVVHIYEDGIKGCDALNSSLICL-------------------------AAEYPM-VKFCKIKAS--N-TGAGDRFSS 183 (245)
T ss_dssp TCEEEEEEECTTSTTHHHHHHHHHHH-------------------------HHHCTT-SEEEEEEHH--H-HCCTTSSCT
T ss_pred CCEEEEEEECCCChHHHHHHHHHHHH-------------------------HHHCCC-CEEEEEeCC--c-HHHHHHCCC
Confidence 34678899999999999999998887 334333 899999998 4 668899999
Q ss_pred CCCCCCeEEEEecCcCceeccCC----CCCCCHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPA----TPEISVDTVRSFVTEF 151 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~----~~~~~~~~l~~fv~~~ 151 (305)
. ++||+++|+.|..+..+.+- ...++.+.|..|+.+.
T Consensus 184 ~--~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 184 D--VLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp T--TCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred C--CCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 8 99999999988665555431 1236778899988876
No 256
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.16 E-value=8.6e-11 Score=96.18 Aligned_cols=93 Identities=11% Similarity=0.193 Sum_probs=73.2
Q ss_pred CC-cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----------------------------cc-c-
Q psy7938 190 SK-HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-----------------------------NE-L- 237 (305)
Q Consensus 190 ~~-~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-----------------------------~~-~- 237 (305)
++ +++|.||++||++|+.+.|.+.++.+.+++. ++.++.|+++. +. .
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPK-GVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVA 123 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGG-TCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhC-CcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHH
Confidence 55 5999999999999999999999999999642 58888888742 11 1
Q ss_pred ccCCcccccEEEEEeCCCceEEe---------eeCCCCHHHHHHHHHhcCCCCCC
Q psy7938 238 EHTKITSFPTLKLYAKDDNRVID---------YNGERVLEALSNFVESGGKEGGL 283 (305)
Q Consensus 238 ~~~~i~~~Ptl~~f~~g~~~~~~---------~~g~~~~~~l~~fi~~~~~~~~~ 283 (305)
+.|++.++|++++++++++.... +.|..+.+.|.+.|++.......
T Consensus 124 ~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~ 178 (196)
T 2ywi_A 124 KAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPV 178 (196)
T ss_dssp HHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCC
T ss_pred HHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcCCCC
Confidence 67899999999999887775544 45777889999999887654433
No 257
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.15 E-value=1.5e-10 Score=91.02 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=70.2
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------------------------c-ccCCccc
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------------------------L-EHTKITS 244 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------------------------~-~~~~i~~ 244 (305)
+++++|.||++||++|+...|.+.++++.+++. ++.++.|+++... . ..|++.+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 113 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQ-GFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTN 113 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG-TEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCS
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccC-CeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCccc
Confidence 689999999999999999999999999999753 5888888877543 2 5678999
Q ss_pred ccEEEEEeCCCceEEeeeCCCCHHHHHHHHH
Q psy7938 245 FPTLKLYAKDDNRVIDYNGERVLEALSNFVE 275 (305)
Q Consensus 245 ~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~ 275 (305)
+|++++++++++...++.|..+.+....-+.
T Consensus 114 ~P~~~lid~~G~i~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 114 LPSVFLVNRNNELSARGENIKDLDEAIKKLL 144 (152)
T ss_dssp CSEEEEEETTTEEEEETTTCSCHHHHHHHHH
T ss_pred CceEEEECCCCeEEEecCCHHHHHHHHHHHH
Confidence 9999999888776778889888776655443
No 258
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.15 E-value=2.3e-10 Score=93.05 Aligned_cols=94 Identities=14% Similarity=0.146 Sum_probs=71.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----------------------------cc-c-
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-----------------------------NE-L- 237 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-----------------------------~~-~- 237 (305)
.++.++|.||++||++|+...+.++++.+.+++. +.++.|+++. +. .
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~ 109 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK--VAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVA 109 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT--EEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC--eEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHH
Confidence 4689999999999999999999999999999753 8888888732 11 1
Q ss_pred ccCCcccccEEEEEeCCCceEEe--------eeCCCCHHHHHHHHHhcCCCCCCC
Q psy7938 238 EHTKITSFPTLKLYAKDDNRVID--------YNGERVLEALSNFVESGGKEGGLP 284 (305)
Q Consensus 238 ~~~~i~~~Ptl~~f~~g~~~~~~--------~~g~~~~~~l~~fi~~~~~~~~~~ 284 (305)
+.|++.++|+++++.++++.... +.|..+.+.|.+.|++.......+
T Consensus 110 ~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~ 164 (188)
T 2cvb_A 110 KAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRGEEPP 164 (188)
T ss_dssp HHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTTCCCC
T ss_pred HHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcCCCCC
Confidence 67899999999999887773333 122336788888888876544433
No 259
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.14 E-value=2.2e-10 Score=90.09 Aligned_cols=94 Identities=10% Similarity=0.188 Sum_probs=71.3
Q ss_pred cChhHHH---hcCCCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCCcccc----ccCCcccccEEE
Q psy7938 180 SNFDEIA---FDKSKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDATVNEL----EHTKITSFPTLK 249 (305)
Q Consensus 180 ~~f~~~v---~~~~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~~~~~----~~~~i~~~Ptl~ 249 (305)
.+|++.+ ...+|+++|+||++||..|+.|.... .++++.++ .+++++++|.+..+. +.|++.++|+++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~--~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~ 106 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR--EHFIFWQVYHDSEEGQRYIQFYKLGDFPYVS 106 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHH--HTEEEEEEESSSHHHHHHHHHHTCCSSSEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHH--cCeEEEEEecCCHhHHHHHHHcCCCCCCEEE
Confidence 4666655 34589999999999999999996654 55666663 378999999876443 689999999999
Q ss_pred EEeCC-CceEEeeeCCCCHHHHHHHHHh
Q psy7938 250 LYAKD-DNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 250 ~f~~g-~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
++... ++....+.| .+.+.+.++|++
T Consensus 107 fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 107 ILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp EECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred EEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 99875 544555656 898888776654
No 260
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.14 E-value=1.6e-10 Score=92.18 Aligned_cols=68 Identities=26% Similarity=0.438 Sum_probs=57.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------cc-ccCCc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------EL-EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~~-~~~~i 242 (305)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++.. .. +.|+|
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 47899999999999999999999999999997645677777776654 12 67899
Q ss_pred ccccEEEEEeCC-Cc
Q psy7938 243 TSFPTLKLYAKD-DN 256 (305)
Q Consensus 243 ~~~Ptl~~f~~g-~~ 256 (305)
.++|++++++++ ++
T Consensus 127 ~~~Pt~~lid~~~G~ 141 (165)
T 3s9f_A 127 ESIPTLIGLNADTGD 141 (165)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEeCCCCE
Confidence 999999999976 66
No 261
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.14 E-value=1.8e-10 Score=89.39 Aligned_cols=68 Identities=22% Similarity=0.343 Sum_probs=57.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------cc-ccCCc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------EL-EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~~-~~~~i 242 (305)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++.. .. +.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 47899999999999999999999999999997535788888877652 12 67899
Q ss_pred ccccEEEEEe-CCCc
Q psy7938 243 TSFPTLKLYA-KDDN 256 (305)
Q Consensus 243 ~~~Ptl~~f~-~g~~ 256 (305)
.++|++++++ ++++
T Consensus 107 ~~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 107 KSIPTLVGVEADSGN 121 (144)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCc
Confidence 9999999998 6666
No 262
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.13 E-value=2e-12 Score=95.28 Aligned_cols=85 Identities=7% Similarity=-0.035 Sum_probs=65.6
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHH----H
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQK----I 106 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~----l 106 (305)
++..++++.|+|+|||+|+.+.|.+.++ +.. +.+.|++||.+ ++++ +
T Consensus 22 ~~~~~vvi~khatwCgpc~~~~~~~e~~-------------------------~~~--~~v~~~~vdVd--e~r~~Sn~I 72 (112)
T 3iv4_A 22 EENKYVFVLKHSETCPISANAYDQFNKF-------------------------LYE--RDMDGYYLIVQ--QERDLSDYI 72 (112)
T ss_dssp HHCSEEEEEEECTTCHHHHHHHHHHHHH-------------------------HHH--HTCCEEEEEGG--GGHHHHHHH
T ss_pred hcCCCEEEEEECCcCHhHHHHHHHHHHH-------------------------hcc--CCceEEEEEee--cCchhhHHH
Confidence 3455678889999999999888888877 222 56889999999 7766 8
Q ss_pred HHHcCCCCCC-CCeEEEEecCcCceeccCCCCCCCHHHHHHHH
Q psy7938 107 LEFFGMSKDE-VPSLRLIRLEEDMAKYKPATPEISVDTVRSFV 148 (305)
Q Consensus 107 ~~~~~I~~~~-~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv 148 (305)
++++||+ + .||+++|++|+.+.+-. -+.++.++|.+.+
T Consensus 73 A~~~~V~--h~sPq~il~k~G~~v~~~S--H~~I~~~~l~~~~ 111 (112)
T 3iv4_A 73 AKKTNVK--HESPQAFYFVNGEMVWNRD--HGDINVSSLAQAE 111 (112)
T ss_dssp HHHHTCC--CCSSEEEEEETTEEEEEEE--GGGCSHHHHHHHT
T ss_pred HHHhCCc--cCCCeEEEEECCEEEEEee--ccccCHHHHHHhh
Confidence 9999997 5 89999999997643321 2567878777654
No 263
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.13 E-value=5e-11 Score=93.33 Aligned_cols=116 Identities=10% Similarity=0.102 Sum_probs=83.1
Q ss_pred CCCCC-eEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVP-SLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p-~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
+...| .+.+...+...+.+. ++ ..+.+|+.||++||++|+.+.|.+.++.
T Consensus 6 G~~~p~~f~l~~~~g~~~~l~--~~-----~gk~~lv~f~~~~C~~C~~~~~~l~~l~---------------------- 56 (152)
T 2lja_A 6 GNPSAASFSYPDINGKTVSLA--DL-----KGKYIYIDVWATWCGPCRGELPALKELE---------------------- 56 (152)
T ss_dssp TCCCSSSCEEEETTTEEEEST--TT-----TTSEEEEEECCSSCCGGGGTHHHHHHHH----------------------
T ss_pred CCCCCcccEeecCCCCEeeHH--Hc-----CCCEEEEEEECCcCHhHHHHhHHHHHHH----------------------
Confidence 56788 998888877666663 22 1256888999999999998877666552
Q ss_pred HHHhhcCc-eEEEEEEeCCchh---------------------HHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCC
Q psy7938 82 TEFLAGNL-KVLFVTINTDEED---------------------HQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPE 138 (305)
Q Consensus 82 ~~~~~~~~-~v~~~~vd~~~~~---------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~ 138 (305)
.++.+ .+.|+.|+++... ...+++.|||. ++|++++++..+. ...+ .|.
T Consensus 57 ---~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~ 128 (152)
T 2lja_A 57 ---EKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLIN--GIPRFILLDRDGKIISAN---MTR 128 (152)
T ss_dssp ---HHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCC--SSCCEEEECTTSCEEESS---CCC
T ss_pred ---HHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcC--CCCEEEEECCCCeEEEcc---CCC
Confidence 22323 4778888877322 13789999998 9999999985443 2233 356
Q ss_pred CCHHHHHHHHHHHHcCc
Q psy7938 139 ISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 139 ~~~~~l~~fv~~~~~~~ 155 (305)
.+.++|.+++.+...+.
T Consensus 129 ~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 129 PSDPKTAEKFNELLGLE 145 (152)
T ss_dssp TTCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHhccc
Confidence 78899999999997653
No 264
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.12 E-value=1.7e-10 Score=103.05 Aligned_cols=88 Identities=16% Similarity=0.216 Sum_probs=74.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----------------------------ccc-cc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----------------------------NEL-EH 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----------------------------~~~-~~ 239 (305)
.+++++|.||++||++|+.+.|.+.++++.+++ .++.++.|+++. ... +.
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~-~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD-SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc-CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 478999999999999999999999999999964 368888887642 112 67
Q ss_pred CCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 240 TKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 240 ~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|+|.++|+++++.++++....+.|..+.+.|.++|++.
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 89999999999988777788899998998888888764
No 265
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.12 E-value=1.8e-10 Score=89.67 Aligned_cols=68 Identities=22% Similarity=0.393 Sum_probs=57.0
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------cc-ccCCc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------EL-EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~~-~~~~i 242 (305)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++.. .. +.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 47899999999999999999999999999997435777777777652 12 67899
Q ss_pred ccccEEEEEe-CCCc
Q psy7938 243 TSFPTLKLYA-KDDN 256 (305)
Q Consensus 243 ~~~Ptl~~f~-~g~~ 256 (305)
.++|++++++ ++++
T Consensus 107 ~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 107 ESIPTLIGVDADSGD 121 (146)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 9999999999 6666
No 266
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.12 E-value=1.9e-11 Score=84.41 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=55.1
Q ss_pred hhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCC
Q psy7938 38 TEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEV 117 (305)
Q Consensus 38 v~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~ 117 (305)
++||++||++|+.+.|.+.++ ..++++.+.++.+| + .+++++|||. ++
T Consensus 4 v~f~a~wC~~C~~~~~~l~~~-------------------------~~~~~~~~~~~~v~-~----~~~~~~~~v~--~~ 51 (77)
T 1ilo_A 4 IQIYGTGCANCQMLEKNAREA-------------------------VKELGIDAEFEKIK-E----MDQILEAGLT--AL 51 (77)
T ss_dssp EEEECSSSSTTHHHHHHHHHH-------------------------HHHTTCCEEEEEEC-S----HHHHHHHTCS--SS
T ss_pred EEEEcCCChhHHHHHHHHHHH-------------------------HHHcCCceEEEEec-C----HHHHHHCCCC--cC
Confidence 579999999999988887766 33445679999998 3 6789999998 99
Q ss_pred CeEEEEecCcCceeccCCCCCC-CHHHHHHHH
Q psy7938 118 PSLRLIRLEEDMAKYKPATPEI-SVDTVRSFV 148 (305)
Q Consensus 118 Ptl~~~~~~~~~~~~~~~~~~~-~~~~l~~fv 148 (305)
||+++ +|+. ... |.. +.++|.+++
T Consensus 52 Pt~~~--~G~~--~~~---G~~~~~~~l~~~l 76 (77)
T 1ilo_A 52 PGLAV--DGEL--KIM---GRVASKEEIKKIL 76 (77)
T ss_dssp SCEEE--TTEE--EEC---SSCCCHHHHHHHC
T ss_pred CEEEE--CCEE--EEc---CCCCCHHHHHHHh
Confidence 99998 4432 221 555 788888775
No 267
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.10 E-value=2.6e-11 Score=94.27 Aligned_cols=114 Identities=12% Similarity=0.102 Sum_probs=80.3
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+..+++ ..+.+|+.||++||++|+...|.+.++
T Consensus 8 g~~~p~~~l~~~~g~~~~l~~~~~-----~gk~vll~F~~~~C~~C~~~~~~l~~l------------------------ 58 (148)
T 3fkf_A 8 GKSAPYFSLPNEKGEKLSRSAERF-----RNRYLLLNFWASWCDPQPEANAELKRL------------------------ 58 (148)
T ss_dssp TSBCCCCCEEBTTSCEECTTSTTT-----TTSEEEEEEECGGGCCCHHHHHHHHHH------------------------
T ss_pred CCcCCCeEeeCCCCCEEecccccc-----CCcEEEEEEECCCCHHHHHHhHHHHHH------------------------
Confidence 566888888887777766631122 235789999999999999887766666
Q ss_pred HHhhc-Cce-EEEEEEeCCchh-----------------------HHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCC
Q psy7938 83 EFLAG-NLK-VLFVTINTDEED-----------------------HQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATP 137 (305)
Q Consensus 83 ~~~~~-~~~-v~~~~vd~~~~~-----------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~ 137 (305)
..++ +++ +.|+.|+++... ...+++.|||. ++|++++++.++.+...
T Consensus 59 -~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~----- 130 (148)
T 3fkf_A 59 -NKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAIL--TLPTNILLSPTGKILAR----- 130 (148)
T ss_dssp -HHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC--SSSEEEEECTTSBEEEE-----
T ss_pred -HHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCC--CcCEEEEECCCCeEEEe-----
Confidence 2333 233 788888777432 55899999998 99999999765442222
Q ss_pred CCCHHHHHHHHHHHHc
Q psy7938 138 EISVDTVRSFVTEFLA 153 (305)
Q Consensus 138 ~~~~~~l~~fv~~~~~ 153 (305)
..+.+++.+++.+.+.
T Consensus 131 ~~~~~~l~~~l~~ll~ 146 (148)
T 3fkf_A 131 DIQGEALTGKLKELLK 146 (148)
T ss_dssp SCCHHHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHHHHc
Confidence 1278889999988754
No 268
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.10 E-value=1.3e-11 Score=94.66 Aligned_cols=113 Identities=15% Similarity=0.077 Sum_probs=77.6
Q ss_pred CCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHH
Q psy7938 5 EVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEF 84 (305)
Q Consensus 5 ~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (305)
..|.+.+...+...+.+. . ...+.+++.||++||++|+.+.|.+.++ .
T Consensus 3 ~~p~~~l~~~~g~~~~l~--~-----~~~k~~lv~f~~~~C~~C~~~~~~l~~~-------------------------~ 50 (136)
T 1lu4_A 3 ERLQFTATTLSGAPFDGA--S-----LQGKPAVLWFWTPWCPFCNAEAPSLSQV-------------------------A 50 (136)
T ss_dssp GGGCCEEEBTTSCEEEGG--G-----GTTSCEEEEEECTTCHHHHHHHHHHHHH-------------------------H
T ss_pred CCCCeEeecCCCCeecHH--H-----hCCCEEEEEEECCcChhHHHHHHHHHHH-------------------------H
Confidence 457777777666666552 1 1235788899999999999877766665 2
Q ss_pred hhcCceEEEEEEeCCc--------------------hhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHH
Q psy7938 85 LAGNLKVLFVTINTDE--------------------EDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTV 144 (305)
Q Consensus 85 ~~~~~~v~~~~vd~~~--------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l 144 (305)
.++. .+.|+.|+++. .....+++.|||. ++|++++++.++.+..+....|..+.++|
T Consensus 51 ~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~--~~P~~~lid~~G~i~~~~~~~g~~~~~~l 127 (136)
T 1lu4_A 51 AANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVP--WQPAFVFYRADGTSTFVNNPTAAMSQDEL 127 (136)
T ss_dssp HHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCC--SSSEEEEECTTSCEEEECCSSSCCCHHHH
T ss_pred HHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCC--CCCEEEEECCCCcEEEEEcCCCccCHHHH
Confidence 3333 56777777763 1256789999998 99999999765443344211266789999
Q ss_pred HHHHHHHH
Q psy7938 145 RSFVTEFL 152 (305)
Q Consensus 145 ~~fv~~~~ 152 (305)
.+++.+.+
T Consensus 128 ~~~l~~ll 135 (136)
T 1lu4_A 128 SGRVAALT 135 (136)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 99988753
No 269
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.10 E-value=2e-12 Score=108.01 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=67.7
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMS 113 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~ 113 (305)
..+|+.||++||++|+.+.|.+..++ .++ +.+.|++||++ +..++..|+|.
T Consensus 121 k~vvV~F~a~wC~~C~~l~p~l~~la-------------------------~~~-~~v~f~~vd~~---~~~l~~~~~i~ 171 (217)
T 2trc_P 121 TTIVVNIYEDGVRGCDALNSSLECLA-------------------------AEY-PMVKFCKIRAS---NTGAGDRFSSD 171 (217)
T ss_dssp CEEEEEEECTTSTTHHHHHHHHHHHH-------------------------TTC-TTSEEEEEEHH---HHTCSTTSCGG
T ss_pred cEEEEEEECCCCccHHHHHHHHHHHH-------------------------HHC-CCeEEEEEECC---cHHHHHHCCCC
Confidence 46888999999999999999888773 333 46889999997 56789999998
Q ss_pred CCCCCeEEEEecCcCceeccCC----CCCCCHHHHHHHHHHH
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPA----TPEISVDTVRSFVTEF 151 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~----~~~~~~~~l~~fv~~~ 151 (305)
++||+++|+.|..+..+.+. ....+.++|..|+.++
T Consensus 172 --~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 172 --VLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp --GCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred --CCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 99999999988765566431 1134468888888765
No 270
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.10 E-value=2.1e-10 Score=96.53 Aligned_cols=148 Identities=16% Similarity=0.254 Sum_probs=96.4
Q ss_pred CCeEEEEee-ccCceecCCCC-CCCChhHHHHHhhhhhcCccccccccc-ceeeeecccccc--cCCCCCcchhhhh-hh
Q psy7938 6 VPSLRLIRL-EEDMAKYKPAT-PEINVDTVRSFVTEFLAGNLKHSKFKK-NLYIHLEEDMAK--YKPASPEINVDTV-RS 79 (305)
Q Consensus 6 ~p~i~l~~~-~~~~~~~~~~~-~~~~~~~~~~~iv~f~a~wc~~c~~~~-p~~~~~~~~~~~--~~~~~~~~~~~~~-~~ 79 (305)
.|+|.|+|. ++....|+... +..+.+.+..||.....|.++.-..-+ +.+......... |.....+ +...+ ..
T Consensus 74 ~p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~-~~~~~~~~ 152 (227)
T 4f9z_D 74 GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASP-EYEENMHR 152 (227)
T ss_dssp SSEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTST-THHHHHHH
T ss_pred CCeEEEEEecCcccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcc-hHHHHHHH
Confidence 489999995 55666773110 246788999999998888877664321 000000001110 1111111 11222 22
Q ss_pred HHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHcCc
Q psy7938 80 FVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 80 ~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~~~ 155 (305)
+...++++++++.|+.+|++..++.++++.||+...++|++++++..+. .+|.+..+.++.++|.+|+.+++.|+
T Consensus 153 ~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~-~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 153 YQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDD-EWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSC-CEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCC-ccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 2333567788999999999865688899999997668999999997644 45655446799999999999999874
No 271
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.09 E-value=3.5e-10 Score=91.17 Aligned_cols=85 Identities=19% Similarity=0.213 Sum_probs=68.0
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-------------------------ccccCCcc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-------------------------ELEHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-------------------------~~~~~~i~ 243 (305)
.+++++|.||++||++|+.+.|.+.++++. ++.++.|+.+.. ....|++.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~-----~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~ 131 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ-----GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVY 131 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT-----TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC-----CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCC
Confidence 478999999999999999999999999876 355665553211 11568899
Q ss_pred cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 244 SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 244 ~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
++|+++++.++++....+.|..+.+.+.++|.+..
T Consensus 132 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 132 GAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp SSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred CCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 99999999888887778999999988888877653
No 272
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.09 E-value=2.9e-10 Score=88.11 Aligned_cols=68 Identities=26% Similarity=0.460 Sum_probs=56.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------c-ccCCc
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------L-EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------~-~~~~i 242 (305)
.+++++|.||++||++|+.+.|.+.++++.++...++.++.|+++.+. . +.|+|
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 478999999999999999999999999999974457777777776531 1 67899
Q ss_pred ccccEEEEEe-CCCc
Q psy7938 243 TSFPTLKLYA-KDDN 256 (305)
Q Consensus 243 ~~~Ptl~~f~-~g~~ 256 (305)
.++|++++++ ++++
T Consensus 107 ~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 107 ESIPTLITINADTGA 121 (144)
T ss_dssp CSSSEEEEEETTTCC
T ss_pred CCCCEEEEEECCCCe
Confidence 9999999999 6666
No 273
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.08 E-value=1.9e-11 Score=93.50 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=78.9
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. . ...+.+++.||++||++|+.+.|.+.++.
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~--~-----~~~k~~ll~f~~~~C~~C~~~~~~l~~~~----------------------- 51 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGE--S-----LLGKPAVLWFWAPWCPTCQGEAPVVGQVA----------------------- 51 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGG--G-----GTTSCEEEEEECTTCHHHHHHHHHHHHHH-----------------------
T ss_pred CCCCCCcccccCCCCEeeHH--H-----hCCCeEEEEEEcCCChhHHHHHHHHHHHH-----------------------
Confidence 34567888877766666552 1 12356888999999999998777666652
Q ss_pred HHhhcCceEEEEEEeCCc---------------------hhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCH
Q psy7938 83 EFLAGNLKVLFVTINTDE---------------------EDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISV 141 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~---------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~ 141 (305)
.+++ .+.|+.|+++. .....+++.|||. ++|++++++.++.+..+ .|..+.
T Consensus 52 --~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~--~~P~~~~id~~g~i~~~---~g~~~~ 123 (136)
T 1zzo_A 52 --ASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVT--QQPAYAFVDPHGNVDVV---RGRMSQ 123 (136)
T ss_dssp --HHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCC--SSSEEEEECTTCCEEEE---ESCCCH
T ss_pred --HHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCC--CCceEEEECCCCCEEEE---ecCCCH
Confidence 2333 56677777642 1346789999998 99999999855443344 367789
Q ss_pred HHHHHHHHHHH
Q psy7938 142 DTVRSFVTEFL 152 (305)
Q Consensus 142 ~~l~~fv~~~~ 152 (305)
++|.+++.+.+
T Consensus 124 ~~l~~~l~~~l 134 (136)
T 1zzo_A 124 DELTRRVTALT 134 (136)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHh
Confidence 99999998875
No 274
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.08 E-value=5.1e-11 Score=93.52 Aligned_cols=115 Identities=16% Similarity=0.204 Sum_probs=79.0
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. ++ .-+.+++.||++||++|+...|.+.++.
T Consensus 6 g~~~p~f~l~~~~G~~~~l~--~~-----~gk~vll~F~a~~C~~C~~~~~~l~~l~----------------------- 55 (152)
T 2lrn_A 6 GSVAPAITGIDLKGNSVSLN--DF-----KGKYVLVDFWFAGCSWCRKETPYLLKTY----------------------- 55 (152)
T ss_dssp TEECCCCEEECSSSCEEESG--GG-----TTSEEEEEEECTTCTTHHHHHHHHHHHH-----------------------
T ss_pred CCcCCCceeEcCCCCEEeHH--Hc-----CCCEEEEEEECCCChhHHHHHHHHHHHH-----------------------
Confidence 44578888877766666552 21 1257888999999999987776666552
Q ss_pred HHhhcCc-eEEEEEEeCCchh-----------------------HHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCC
Q psy7938 83 EFLAGNL-KVLFVTINTDEED-----------------------HQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPE 138 (305)
Q Consensus 83 ~~~~~~~-~v~~~~vd~~~~~-----------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~ 138 (305)
.++++ .+.|+.|+++... ...+++.|||. ++|++++++..+.+ .+. .
T Consensus 56 --~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i-~~~----~ 126 (152)
T 2lrn_A 56 --NAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIV--GFPHIILVDPEGKI-VAK----E 126 (152)
T ss_dssp --HHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCC--SSCEEEEECTTSEE-EEE----C
T ss_pred --HHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCC--cCCeEEEECCCCeE-EEe----e
Confidence 22223 3788888887311 57899999998 99999999755432 221 1
Q ss_pred CCHHHHHHHHHHHHcCcc
Q psy7938 139 ISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 139 ~~~~~l~~fv~~~~~~~~ 156 (305)
.+.+++.+++.+.+.+..
T Consensus 127 ~~~~~l~~~l~~l~~~~~ 144 (152)
T 2lrn_A 127 LRGDDLYNTVEKFVNGAK 144 (152)
T ss_dssp CCTTHHHHHHHHHHTSSS
T ss_pred CCHHHHHHHHHHHHhhcc
Confidence 245689999998876543
No 275
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.08 E-value=7.9e-10 Score=86.40 Aligned_cols=86 Identities=22% Similarity=0.303 Sum_probs=68.2
Q ss_pred CCCcEEEEEECCCChh--hhhHHHHHHHHHHHhCCCCceEEEEEeCCccc--------------------------c-cc
Q psy7938 189 KSKHVLVEFYAPWCGH--CKQLAPIYDKLGEKFADRDDITIAKIDATVNE--------------------------L-EH 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~--C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~--------------------------~-~~ 239 (305)
.+++++|.||++||++ |+...|.+.++.+.++...++.++.|+.+... . +.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 99999999999999933346888888777542 2 67
Q ss_pred CCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 240 TKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 240 ~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
|++.++|++++++++++...++. +.+.+.+.|++.
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKNL---RGEELKKKIENI 146 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHH
Confidence 89999999999988777444443 677777777653
No 276
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.07 E-value=2.3e-10 Score=97.32 Aligned_cols=94 Identities=14% Similarity=0.216 Sum_probs=76.5
Q ss_pred cChhHHHhcCCCcEEEEEECCC--ChhhhhHHHHHHHHHHHhCC-CCc--eEEEEEeCCcccc--ccCCcccccEEEEEe
Q psy7938 180 SNFDEIAFDKSKHVLVEFYAPW--CGHCKQLAPIYDKLGEKFAD-RDD--ITIAKIDATVNEL--EHTKITSFPTLKLYA 252 (305)
Q Consensus 180 ~~f~~~v~~~~~~~lv~f~~~~--C~~C~~~~~~~~~la~~~~~-~~~--v~~~~id~~~~~~--~~~~i~~~Ptl~~f~ 252 (305)
..|.+++..-+++++|.||++| |++|+.+.+.+.++|+.... +++ +.|+.+|++.+.. ..|+|+++||+++|
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 4455555455689999999999 99999999999999988521 223 9999999988764 89999999999999
Q ss_pred CCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 253 KDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 253 ~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
+| ..+|.|......+..|+...
T Consensus 94 ~g---~~~~~G~~~~~~l~~fv~~~ 115 (243)
T 2hls_A 94 GG---EVRWTGIPAGEEIRALVEVI 115 (243)
T ss_dssp TT---TEEEESCCCTTHHHHHHHHH
T ss_pred CC---ceeEcCCCcHHHHHHHHHHH
Confidence 44 57899988888888887764
No 277
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.07 E-value=5.3e-12 Score=101.49 Aligned_cols=89 Identities=13% Similarity=0.103 Sum_probs=61.9
Q ss_pred HHHHhhhhhcCccccccccccee---eeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHH---
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLY---IHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKI--- 106 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l--- 106 (305)
.+.++++|||+||++|+.+.+.+ ..+. ..++..+.++.||++. ...+
T Consensus 47 gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~-------------------------~~~~~~~~~v~v~~d~--~~~~~~~ 99 (172)
T 3f9u_A 47 NKPVMLDFTGYGCVNCRKMELAVWTDPKVS-------------------------SIINNDYVLITLYVDN--KTPLTEP 99 (172)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHTTTSHHHH-------------------------HHHHHHCEEEEEETTC--CCEEEEE
T ss_pred CCeEEEEEECCCCHHHHHHHHHhcCCHHHH-------------------------HHhcCCEEEEEEecCc--ccccchh
Confidence 45788899999999999763222 2221 1112368899999883 2222
Q ss_pred -----------------------HHHcCCCCCCCCeEEEEec-CcCceeccCCCCCCC-HHHHHHHHHHHHc
Q psy7938 107 -----------------------LEFFGMSKDEVPSLRLIRL-EEDMAKYKPATPEIS-VDTVRSFVTEFLA 153 (305)
Q Consensus 107 -----------------------~~~~~I~~~~~Ptl~~~~~-~~~~~~~~~~~~~~~-~~~l~~fv~~~~~ 153 (305)
+.+|||. ++||+++++. |+...++ .|..+ .+++.+++.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~Pt~~lid~~G~~~~~~---~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 100 VKIMENGTERTLRTVGDKWSYLQRVKFGAN--AQPFYVLIDNEGNPLNKS---YAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEETTEEEEEEEHHHHHHHHHHHHHSCC--CSSEEEEECTTSCBSSCC---BCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhcchhhhhhhhhhhhhHHHHHHcCCC--CcceEEEECCCCCEEeec---cCCCCCHHHHHHHHHHHHH
Confidence 6899998 9999999965 4333334 26677 9999999998764
No 278
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.07 E-value=1.9e-11 Score=94.68 Aligned_cols=108 Identities=9% Similarity=0.106 Sum_probs=79.5
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+.. ..+.+++.||++||++|+.+.|.+.++.
T Consensus 12 g~~~p~~~l~~~~g~~~~l~~--------~gk~~ll~f~~~~C~~C~~~~~~l~~~~----------------------- 60 (145)
T 3erw_A 12 PAVPAVFLMKTIEGEDISIPN--------KGQKTILHFWTSWCPPCKKELPQFQSFY----------------------- 60 (145)
T ss_dssp CCSCCEEEEECTTSCEEEESC--------TTSEEEEEEECSSCHHHHHHHHHHHHHH-----------------------
T ss_pred CCcCCCceeecCCCCEEeHHH--------CCCEEEEEEECCCCHHHHHHHHHHHHHH-----------------------
Confidence 456888888888777776631 3367899999999999998877666662
Q ss_pred HHhhcC-ceEEEEEEeCCc-----------------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCC
Q psy7938 83 EFLAGN-LKVLFVTINTDE-----------------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATP 137 (305)
Q Consensus 83 ~~~~~~-~~v~~~~vd~~~-----------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~ 137 (305)
.+++ ..+.|+.|+++. .....+++.|+|. ++|++++++..+. ...+ .|
T Consensus 61 --~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g 133 (145)
T 3erw_A 61 --DAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHII--TIPTSFLLNEKGEIEKTK---IG 133 (145)
T ss_dssp --HHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCC--EESEEEEECTTCCEEEEE---ES
T ss_pred --HHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcC--ccCeEEEEcCCCcEEEEE---cC
Confidence 3333 458888888863 1246799999998 9999999975544 2344 36
Q ss_pred CCCHHHHHHHH
Q psy7938 138 EISVDTVRSFV 148 (305)
Q Consensus 138 ~~~~~~l~~fv 148 (305)
..+.++|.+++
T Consensus 134 ~~~~~~l~~~l 144 (145)
T 3erw_A 134 PMTAEQLKEWT 144 (145)
T ss_dssp CCCHHHHHHHH
T ss_pred CcCHHHHHHhh
Confidence 78888988876
No 279
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.06 E-value=2.5e-11 Score=95.83 Aligned_cols=93 Identities=12% Similarity=0.077 Sum_probs=66.6
Q ss_pred HHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc---------hh
Q psy7938 33 VRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE---------ED 102 (305)
Q Consensus 33 ~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~ 102 (305)
.+++++.|| |+||++|+.+.|.+....... ......+.++.||++. ..
T Consensus 47 gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~----------------------~~~~~~~~~v~vd~~~~~~~~~~~~~~ 104 (154)
T 2ju5_A 47 HKPIGLFFTGSDWCMWCIKMQDQILQSSEFK----------------------HFAGVHLHMVEVDFPQKNHQPEEQRQK 104 (154)
T ss_dssp CCCEEEEEECTTTCHHHHHHHHHTTTSHHHH----------------------HHHHHHCEEEEEECCSSCCCCHHHHHH
T ss_pred CCeEEEEEeCCCCCHhHHHHHHHHhcCHHHH----------------------HHhcCcEEEEEecCccccCCChhhHhh
Confidence 356788999 999999998888774321111 1112468899999974 23
Q ss_pred HHHHHHHcCCCCCCCCeEEEEec-CcCceeccCCCCCC--CHHHHHHHHHHHHc
Q psy7938 103 HQKILEFFGMSKDEVPSLRLIRL-EEDMAKYKPATPEI--SVDTVRSFVTEFLA 153 (305)
Q Consensus 103 ~~~l~~~~~I~~~~~Ptl~~~~~-~~~~~~~~~~~~~~--~~~~l~~fv~~~~~ 153 (305)
+..+++.|+|. ++||+++++. |+...++ |.. +.+++.+++...+.
T Consensus 105 ~~~l~~~~~v~--~~Pt~~~~d~~G~~~~~~----G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 105 NQELKAQYKVT--GFPELVFIDAEGKQLARM----GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp HHHHHHHTTCC--SSSEEEEECTTCCEEEEE----CCCTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCC--CCCEEEEEcCCCCEEEEe----cCCCCCHHHHHHHHHHHHh
Confidence 56899999998 9999999964 4333333 334 88999999998864
No 280
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.05 E-value=3.7e-09 Score=90.24 Aligned_cols=163 Identities=13% Similarity=0.165 Sum_probs=118.2
Q ss_pred HhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCc-------CceeccCCCCCCCHHHHHHHHHHHHcCcc
Q psy7938 84 FLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEE-------DMAKYKPATPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 84 ~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~-------~~~~~~~~~~~~~~~~l~~fv~~~~~~~~ 156 (305)
+..+++.+.|+.+. + ..++..+++. + |++++|+++. ....| .. |.++.++|.+|+....
T Consensus 47 A~~lr~~~~F~~~~-~----~~v~~~~~~~--~-p~i~~fk~~~~~~kf~e~~~~y-~~-g~~~~~~l~~fi~~~~---- 112 (252)
T 2h8l_A 47 ASNLRDNYRFAHTN-V----ESLVNEYDDN--G-EGIILFRPSHLTNKFEDKTVAY-TE-QKMTSGKIKKFIQENI---- 112 (252)
T ss_dssp HHHTTTTSCEEEEC-C----HHHHHHHCSS--S-EEEEEECCGGGCCTTSCSEEEC-CC-SSCCHHHHHHHHHHHS----
T ss_pred HHhcccCcEEEEEC-h----HHHHHHhCCC--C-CcEEEEcchhhccccccccccc-CC-CCcCHHHHHHHHHhcc----
Confidence 45555778888774 2 4689999996 5 9999998641 21233 03 6689999999999983
Q ss_pred cccccCCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECCCChh----hhhHHHHHHHHHHHhCC-CCceEEEEEe
Q psy7938 157 KQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAPWCGH----CKQLAPIYDKLGEKFAD-RDDITIAKID 231 (305)
Q Consensus 157 ~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~~C~~----C~~~~~~~~~la~~~~~-~~~v~~~~id 231 (305)
-..|.+++..++..+ .+.+++|.|+...+.. ...+...+.++|+.+++ ...+.|+.+|
T Consensus 113 --------------~Plv~e~t~~n~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d 175 (252)
T 2h8l_A 113 --------------FGICPHMTEDNKDLI---QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVAS 175 (252)
T ss_dssp --------------SCSSCEECTTTHHHH---SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred --------------cCCeeecccccHhhh---cCCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEc
Confidence 223899999999885 2556777777654322 12477888899999975 2349999999
Q ss_pred CCcccc--ccCCc----ccccEEEEEeCCCceEEeeeCCCCHHH--HHHHHHhcC
Q psy7938 232 ATVNEL--EHTKI----TSFPTLKLYAKDDNRVIDYNGERVLEA--LSNFVESGG 278 (305)
Q Consensus 232 ~~~~~~--~~~~i----~~~Ptl~~f~~g~~~~~~~~g~~~~~~--l~~fi~~~~ 278 (305)
++.... ..+++ ..+|+++++...+. ...+.+..+.+. |.+|+++-.
T Consensus 176 ~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~-ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 176 RKTFSHELSDFGLESTAGEIPVVAIRTAKGE-KFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp TTTTHHHHGGGTCCCCSCSSCEEEEECTTSC-EEECCSCCCTTSHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCCccCCCCEEEEEeCcCc-EecCCcccCcchHHHHHHHHHHH
Confidence 887654 77888 36999999975443 455677788888 999999753
No 281
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.05 E-value=3.5e-12 Score=101.92 Aligned_cols=95 Identities=15% Similarity=0.063 Sum_probs=66.5
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHH-HHHHcC
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQK-ILEFFG 111 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~-l~~~~~ 111 (305)
.+++++.|||+||++|+.+.|.+.++.... ...+.|+.||++ +... ++..|+
T Consensus 46 ~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~-------------------------~~~~~~~~v~~d--~~~~~~~~~~~ 98 (164)
T 1sen_A 46 GLPLMVIIHKSWCGACKALKPKFAESTEIS-------------------------ELSHNFVMVNLE--DEEEPKDEDFS 98 (164)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHTCHHHH-------------------------HHHTTSEEEEEE--GGGSCSCGGGC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHh-------------------------hcCCeEEEEEec--CCchHHHHHhc
Confidence 457788999999999999988877762211 123557788887 4444 788899
Q ss_pred CCCCCCCeEEEEe-cCcCceeccCCCC-------CCCHHHHHHHHHHHHcC
Q psy7938 112 MSKDEVPSLRLIR-LEEDMAKYKPATP-------EISVDTVRSFVTEFLAG 154 (305)
Q Consensus 112 I~~~~~Ptl~~~~-~~~~~~~~~~~~~-------~~~~~~l~~fv~~~~~~ 154 (305)
+...++||+++|+ .|..+.++.+..+ ..+.++|.+++.+.+..
T Consensus 99 ~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 99 PDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp TTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred ccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHHh
Confidence 9534799999995 4544344432111 37889999999988653
No 282
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.05 E-value=6.9e-10 Score=86.03 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=65.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc---------------------------c-ccC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE---------------------------L-EHT 240 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~---------------------------~-~~~ 240 (305)
.+++++|.||++||++|+.+.|.+.++.+.++.. ++.++.|+.+.+. . +.|
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 109 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPD-KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKY 109 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTT-TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC-CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHc
Confidence 4689999999999999999999999999999753 6888877766321 1 568
Q ss_pred CcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 241 KITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 241 ~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
+|.++|++++++++++...+. ...+.+.++|++
T Consensus 110 ~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 142 (143)
T 4fo5_A 110 DLRKGFKNFLINDEGVIIAAN---VTPEKLTEILKA 142 (143)
T ss_dssp TGGGCCCEEEECTTSBEEEES---CCHHHHHHHHTC
T ss_pred CCCCCCcEEEECCCCEEEEcc---CCHHHHHHHHHh
Confidence 899999999999877743333 346777777653
No 283
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.04 E-value=7.6e-11 Score=93.53 Aligned_cols=113 Identities=12% Similarity=0.156 Sum_probs=79.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. .+ .-+.+|+.||++||++|+.+.|.+.++.
T Consensus 11 g~~~p~~~l~~~~g~~~~l~--~~-----~gk~vlv~f~~~~C~~C~~~~~~l~~l~----------------------- 60 (165)
T 3or5_A 11 PTPAPSFSGVTVDGKPFSSA--SL-----KGKAYIVNFFATWCPPCRSEIPDMVQVQ----------------------- 60 (165)
T ss_dssp CCBCCCCEEECTTSCEEEGG--GG-----TTCEEEEEEECTTSHHHHHHHHHHHHHH-----------------------
T ss_pred CCCCCCceeeCCCCCEechh--Hc-----CCCEEEEEEEcCcCHHHHHHHHHHHHHH-----------------------
Confidence 45678888888777666663 11 1257889999999999998777666652
Q ss_pred HHhhcCc-eEEEEEEeCCchhHHHHHHHc---------------------------CCCCCCCCeEEEEecCcCc-eecc
Q psy7938 83 EFLAGNL-KVLFVTINTDEEDHQKILEFF---------------------------GMSKDEVPSLRLIRLEEDM-AKYK 133 (305)
Q Consensus 83 ~~~~~~~-~v~~~~vd~~~~~~~~l~~~~---------------------------~I~~~~~Ptl~~~~~~~~~-~~~~ 133 (305)
.++++ .+.|+.|+++ +....+.++ +|. ++|++++++..+.+ ..+
T Consensus 61 --~~~~~~~v~~v~v~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lid~~G~i~~~~- 133 (165)
T 3or5_A 61 --KTWASRGFTFVGIAVN--EQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGIT--GIPTSFVIDASGNVSGVI- 133 (165)
T ss_dssp --HHHTTTTEEEEEEECS--CCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSC--SSSEEEEECTTSBEEEEE-
T ss_pred --HHhccCCeEEEEEECC--CCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCC--CCCeEEEECCCCcEEEEE-
Confidence 22223 3888888888 333334444 787 99999999755442 334
Q ss_pred CCCCCCCHHHHHHHHHHHHcC
Q psy7938 134 PATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 134 ~~~~~~~~~~l~~fv~~~~~~ 154 (305)
.|..+.+++.+++.+.+..
T Consensus 134 --~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 134 --VGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp --CSCCCHHHHHHHHHHHHC-
T ss_pred --cCCCCHHHHHHHHHHHHhh
Confidence 3677899999999999864
No 284
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.04 E-value=2.7e-11 Score=94.86 Aligned_cols=117 Identities=14% Similarity=0.198 Sum_probs=81.3
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+. ++ .-+.+|+.||++||++|+.+.|.+.++...+
T Consensus 3 G~~~p~~~l~~~~g~~~~l~--~~-----~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~-------------------- 55 (151)
T 2f9s_A 3 GSDAPNFVLEDTNGKRIELS--DL-----KGKGVFLNFWGTWCEPCKKEFPYMANQYKHF-------------------- 55 (151)
T ss_dssp CEECCCCEEECTTCCEEEGG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHHHHH--------------------
T ss_pred CCcCCcceeEcCCCCEEEHH--Hc-----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHh--------------------
Confidence 45678888877776666662 11 1256888999999999997777666652222
Q ss_pred HHhhcCceEEEEEEeCCchh--------------------HHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCH
Q psy7938 83 EFLAGNLKVLFVTINTDEED--------------------HQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISV 141 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~~~--------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~ 141 (305)
.. ..+.|+.|+++... ...+++.|||. ++|++++++..+. ...+ .|..+.
T Consensus 56 --~~--~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~G~~~~ 126 (151)
T 2f9s_A 56 --KS--QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVS--PLPTTFLINPEGKVVKVV---TGTMTE 126 (151)
T ss_dssp --GG--GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCC--SSCEEEEECTTSEEEEEE---ESCCCH
T ss_pred --cc--CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCC--CCCeEEEECCCCcEEEEE---eCCCCH
Confidence 11 24777777776311 35789999998 9999999965433 3334 266789
Q ss_pred HHHHHHHHHHHcCc
Q psy7938 142 DTVRSFVTEFLAGN 155 (305)
Q Consensus 142 ~~l~~fv~~~~~~~ 155 (305)
++|.+++...+.+.
T Consensus 127 ~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 127 SMIHDYMNLIKPGE 140 (151)
T ss_dssp HHHHHHHHHHSCC-
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999987653
No 285
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.03 E-value=1.2e-11 Score=98.87 Aligned_cols=68 Identities=6% Similarity=-0.086 Sum_probs=55.0
Q ss_pred HHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcC---
Q psy7938 35 SFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFG--- 111 (305)
Q Consensus 35 ~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~--- 111 (305)
..++.|||+||+||+.+.|.+.++ +..+ +.+.|+.||.+ ++++++.+|+
T Consensus 56 ~vvv~F~A~WC~pC~~~~P~l~~l-------------------------~~~~-~~v~~~~v~~d--~~~~~~~~~~~~~ 107 (167)
T 1z6n_A 56 YRLLVAGEMWCPDCQINLAALDFA-------------------------QRLQ-PNIELAIISKG--RAEDDLRQRLALE 107 (167)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHH-------------------------HHHC-TTEEEEEECHH--HHHHHTTTTTTCS
T ss_pred EEEEEEECCCChhHHHHHHHHHHH-------------------------HHHC-CCcEEEEEECC--CCHHHHHHHHHcC
Confidence 467789999999999999988887 2333 35899999998 8889999897
Q ss_pred CCCCCCCeEEEEecCcC-ceec
Q psy7938 112 MSKDEVPSLRLIRLEED-MAKY 132 (305)
Q Consensus 112 I~~~~~Ptl~~~~~~~~-~~~~ 132 (305)
|. ++||+++|+.++. ...+
T Consensus 108 v~--~iPt~i~~~~~G~~~~~~ 127 (167)
T 1z6n_A 108 RI--AIPLVLVLDEEFNLLGRF 127 (167)
T ss_dssp SC--CSSEEEEECTTCCEEEEE
T ss_pred CC--CcCeEEEECCCCCEEEEE
Confidence 87 9999999998643 3344
No 286
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.03 E-value=1.7e-11 Score=95.27 Aligned_cols=115 Identities=10% Similarity=0.081 Sum_probs=76.3
Q ss_pred CCCCCeEEE--EeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhH
Q psy7938 3 KDEVPSLRL--IRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSF 80 (305)
Q Consensus 3 ~~~~p~i~l--~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (305)
++..|.+.+ ...+...+.+. ....+.+++.||++||++|+.+.|.+.++.
T Consensus 4 g~~~P~f~~~~~~~~g~~~~~~-------~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~--------------------- 55 (148)
T 2b5x_A 4 RQPMPELTGEKAWLNGEVTREQ-------LIGEKPTLIHFWSISCHLCKEAMPQVNEFR--------------------- 55 (148)
T ss_dssp TCBCCCCCCCSEEESCCCCHHH-------HTTTSCEEEEEECTTCHHHHHHHHHHHHHH---------------------
T ss_pred CCCCCCCccccccccCcccchh-------hcCCCEEEEEEEcCCCHHHHHHhHHHHHHH---------------------
Confidence 445666655 34444433331 112356788999999999998777666652
Q ss_pred HHHHhhcCceEEEEEEeCCc-------------------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccC
Q psy7938 81 VTEFLAGNLKVLFVTINTDE-------------------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKP 134 (305)
Q Consensus 81 ~~~~~~~~~~v~~~~vd~~~-------------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~ 134 (305)
.++++++.|+.|+++. .....+++.|||. ++|++++++.++. ...+
T Consensus 56 ----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~-- 127 (148)
T 2b5x_A 56 ----DKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENE--YVPAYYVFDKTGQLRHFQ-- 127 (148)
T ss_dssp ----HHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCC--CSSEEEEECTTCBEEEEE--
T ss_pred ----HHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCC--CCCEEEEECCCCcEEEEe--
Confidence 2223337777777542 1346799999998 9999999965443 2334
Q ss_pred CCCCCCHHHHHHHHHHHHcC
Q psy7938 135 ATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 135 ~~~~~~~~~l~~fv~~~~~~ 154 (305)
.|..+.+++.+++.+.+..
T Consensus 128 -~g~~~~~~l~~~l~~~l~~ 146 (148)
T 2b5x_A 128 -AGGSGMKMLEKRVNRVLAE 146 (148)
T ss_dssp -ESCSTTHHHHHHHHHHHTT
T ss_pred -cCCCCHHHHHHHHHHHHhc
Confidence 2567889999999998753
No 287
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.02 E-value=1.1e-10 Score=91.40 Aligned_cols=137 Identities=15% Similarity=0.191 Sum_probs=81.3
Q ss_pred CCCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeeccccccc----CC-CCCcchhhh
Q psy7938 2 SKDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKY----KP-ASPEINVDT 76 (305)
Q Consensus 2 ~~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~----~~-~~~~~~~~~ 76 (305)
-++..|.+.+...+...+.+. + -.-+.+|+.||++||++|+...|.+.++...+... .. +....+.+.
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~--~-----~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~ 76 (153)
T 2l5o_A 4 DSKTAPAFSLPDLHGKTVSNA--D-----LQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIES 76 (153)
T ss_dssp CCTTCCSCEEECTTSCEEEHH--H-----HTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHH
T ss_pred CCCCCCCcEeecCCCCCccHH--H-----hCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHH
Confidence 467789888888766666552 1 11256788999999999987777666653333210 00 000000111
Q ss_pred hhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHcCc
Q psy7938 77 VRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 77 ~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~~~ 155 (305)
+..++.+. .-.. .+.++ ....+++.|||. ++|++++++..+. ...+ .|..+.++|.+++...+.+.
T Consensus 77 ~~~~~~~~---~~~~---~~~~d--~~~~~~~~~~i~--~~P~~~lid~~G~i~~~~---~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 77 VRQYVKDY---GLPF---TVMYD--ADKAVGQAFGTQ--VYPTSVLIGKKGEILKTY---VGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp HHHHHHHT---TCCS---EEEEC--SSCHHHHHHTCC--SSSEEEEECSSSCCCEEE---ESSCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHc---CCCc---eEEcC--chHHHHHHcCCC--ccCeEEEECCCCcEEEEE---cCCCCHHHHHHHHHHHHHhh
Confidence 11111111 0000 11223 346789999998 9999999975443 3344 26688999999999998765
Q ss_pred ccc
Q psy7938 156 LKQ 158 (305)
Q Consensus 156 ~~~ 158 (305)
..+
T Consensus 144 ~~~ 146 (153)
T 2l5o_A 144 DAE 146 (153)
T ss_dssp SSC
T ss_pred hhc
Confidence 443
No 288
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=99.00 E-value=1e-10 Score=87.44 Aligned_cols=80 Identities=16% Similarity=0.385 Sum_probs=59.2
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc------cc-ccCCcccccEEEEEeCCCceEEeee
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN------EL-EHTKITSFPTLKLYAKDDNRVIDYN 262 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~ 262 (305)
++.+++ ||++||++|+.+.+.+.+++. .+.++.+|.+.+ .. ..+++.++|++ |.+|. ....+.
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~~------~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~-~v~~~~ 88 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVGA------SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGK-QIGGCD 88 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHTC------CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTE-EEECHH
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcCC------CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCE-EECChH
Confidence 345665 999999999999999998853 356777776654 23 67899999999 44553 366666
Q ss_pred CCC---CHHHHHHHHHhcCC
Q psy7938 263 GER---VLEALSNFVESGGK 279 (305)
Q Consensus 263 g~~---~~~~l~~fi~~~~~ 279 (305)
|.. +.+.|.++|.+...
T Consensus 89 ~~~~~~~~~~l~~~l~~~g~ 108 (116)
T 2e7p_A 89 TVVEKHQRNELLPLLQDAAA 108 (116)
T ss_dssp HHHHHHHTTCHHHHHHHTTC
T ss_pred HHHHHHhCChHHHHHHHccc
Confidence 654 66789999988654
No 289
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.00 E-value=2.2e-10 Score=99.16 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=56.6
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC----Cccc-c-ccCCcccccEEEEEeCCCceEEeeeCCCC
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA----TVNE-L-EHTKITSFPTLKLYAKDDNRVIDYNGERV 266 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~----~~~~-~-~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~ 266 (305)
.+|+||++||++|+++.|.|++++++++ .+.+|. +++. . ++++|+++||+++ +| + .|.|.++
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G-~---~~~G~~~ 267 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NG-R---TYTGVRS 267 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT-E---EEESCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CC-E---EecCCCC
Confidence 4789999999999999999999997762 233331 1122 2 7899999999655 44 3 3999999
Q ss_pred HHHHHHHHHhcCCC
Q psy7938 267 LEALSNFVESGGKE 280 (305)
Q Consensus 267 ~~~l~~fi~~~~~~ 280 (305)
.+.|.+|+.-+...
T Consensus 268 ~~~L~~~l~~~~~~ 281 (291)
T 3kp9_A 268 LEALAVASGYPLEE 281 (291)
T ss_dssp HHHHHHHTCCCC--
T ss_pred HHHHHHHHCCCCcc
Confidence 99999998755443
No 290
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.99 E-value=1.8e-09 Score=90.10 Aligned_cols=92 Identities=16% Similarity=0.277 Sum_probs=70.9
Q ss_pred CC-cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----------------------------c-cc-
Q psy7938 190 SK-HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-----------------------------N-EL- 237 (305)
Q Consensus 190 ~~-~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-----------------------------~-~~- 237 (305)
++ .++|.||++||++|+...|.+.++++.+++ .++.++.|+.+. + ..
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~ 136 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAG-QGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVA 136 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT-TTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh-CCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHH
Confidence 55 599999999999999999999999999975 358888888741 1 12
Q ss_pred ccCCcccccEEEEEeCCCceEEeeeC-----------CCCHHHHHHHHHhcCCCCCCC
Q psy7938 238 EHTKITSFPTLKLYAKDDNRVIDYNG-----------ERVLEALSNFVESGGKEGGLP 284 (305)
Q Consensus 238 ~~~~i~~~Ptl~~f~~g~~~~~~~~g-----------~~~~~~l~~fi~~~~~~~~~~ 284 (305)
+.|++.++|++++++++++. .|.| ..+.+.|.+.|++.......+
T Consensus 137 ~~~~v~~~P~~~liD~~G~i--~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~ 192 (218)
T 3u5r_E 137 KAYGAACTPDFFLYDRERRL--VYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVG 192 (218)
T ss_dssp HHHTCCEESEEEEECTTCBE--EEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCC
T ss_pred HHcCCCCCCeEEEECCCCcE--EEeccccccccccccccCHHHHHHHHHHHHcCCCCC
Confidence 67899999999999887773 3443 345688888888875544433
No 291
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.99 E-value=3.4e-11 Score=96.59 Aligned_cols=95 Identities=8% Similarity=0.104 Sum_probs=62.4
Q ss_pred hhHHHHHhhhhhcCcccccccccc-eeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHH
Q psy7938 30 VDTVRSFVTEFLAGNLKHSKFKKN-LYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILE 108 (305)
Q Consensus 30 ~~~~~~~iv~f~a~wc~~c~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~ 108 (305)
..+.++++++|||+||++|+.+.| .|..- +. + ......+.+++||.+ ++++++.
T Consensus 36 ~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~-~v--------------------a--~~l~~~fv~ikVD~d--e~~~l~~ 90 (173)
T 3ira_A 36 RKENKPVFLSIGYSTCHWCHMMAHESFEDE-EV--------------------A--GLMNEAFVSIKVDRE--ERPDIDN 90 (173)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHTTTCH-HH--------------------H--HHHHHHCEEEEEETT--TCHHHHH
T ss_pred HHhCCCEEEecccchhHhhccccccccCCH-HH--------------------H--HHHHhcCceeeeCCc--ccCcHHH
Confidence 355678899999999999998876 33211 00 1 111235789999999 7888888
Q ss_pred Hc--------CCCCCCCCeEEEEecCcC-c--eeccCCCCCCCHHHHHHHHHHH
Q psy7938 109 FF--------GMSKDEVPSLRLIRLEED-M--AKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 109 ~~--------~I~~~~~Ptl~~~~~~~~-~--~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
.| ||. ++||+++|+.++. + ..|.+..+..+...+.+++...
T Consensus 91 ~y~~~~q~~~gv~--g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v 142 (173)
T 3ira_A 91 IYMTVCQIILGRG--GWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRI 142 (173)
T ss_dssp HHHHHHHHHHSCC--CSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHH
T ss_pred HHHHHHHHHcCCC--CCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHH
Confidence 88 998 9999999985443 2 2233322333444555555554
No 292
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=4.6e-11 Score=94.46 Aligned_cols=90 Identities=21% Similarity=0.311 Sum_probs=66.9
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHH-HHHHhCCCCceEEEEEeCCccc--cccCC------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDK-LGEKFADRDDITIAKIDATVNE--LEHTK------------------------ 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~-la~~~~~~~~v~~~~id~~~~~--~~~~~------------------------ 241 (305)
.+++++|.||++||++|+.+.|.+.+ +...++...++.++.|+++.+. ..++.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46799999999999999999999998 8888863356888888776543 23332
Q ss_pred cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 242 ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 242 i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+.++|+++++.++++....+.| .+.+.+.++|++...
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~~ 148 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQINE 148 (159)
Confidence 5779999999776665556666 456677777765443
No 293
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.97 E-value=2.3e-10 Score=89.43 Aligned_cols=117 Identities=14% Similarity=0.179 Sum_probs=79.3
Q ss_pred CCCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 2 SKDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 2 ~~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
.++..|.+.+.. +...+.+. ++ .-+.+|+.||++||++|+...|.+.++...+
T Consensus 5 ~G~~~P~f~l~~-~g~~~~l~--~~-----~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~------------------- 57 (152)
T 3gl3_A 5 KGDKAPDFALPG-KTGVVKLS--DK-----TGSVVYLDFWASWCGPCRQSFPWMNQMQAKY------------------- 57 (152)
T ss_dssp TTSBCCCCEEEB-SSSEEEGG--GG-----TTSEEEEEEECTTCTHHHHHHHHHHHHHHHH-------------------
T ss_pred CCCcCCceEeeC-CCCeEeHH--Hh-----CCCEEEEEEECCcCHHHHHHHHHHHHHHHHh-------------------
Confidence 366788988888 66666662 11 2357888999999999987776666653322
Q ss_pred HHHhhcCc-eEEEEEEeCCchh--------------------HHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCC
Q psy7938 82 TEFLAGNL-KVLFVTINTDEED--------------------HQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEI 139 (305)
Q Consensus 82 ~~~~~~~~-~v~~~~vd~~~~~--------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~ 139 (305)
++ .+.++.|+++... ...+++.|||. ++|++++++..+. ...+.+. ...
T Consensus 58 ------~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~-~~~ 128 (152)
T 3gl3_A 58 ------KAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVK--GMPTSFLIDRNGKVLLQHVGF-RPA 128 (152)
T ss_dssp ------GGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCC--SSSEEEEECTTSBEEEEEESC-CTT
T ss_pred ------hcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCC--CCCeEEEECCCCCEEEEEccC-CCc
Confidence 22 2777777777321 12688999998 9999999975544 2334322 234
Q ss_pred CHHHHHHHHHHHHcC
Q psy7938 140 SVDTVRSFVTEFLAG 154 (305)
Q Consensus 140 ~~~~l~~fv~~~~~~ 154 (305)
+.++|.+++.+.+.+
T Consensus 129 ~~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 129 DKEALEQQILAALGG 143 (152)
T ss_dssp THHHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHcc
Confidence 668999999998754
No 294
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.96 E-value=3.1e-09 Score=84.72 Aligned_cols=90 Identities=14% Similarity=0.128 Sum_probs=72.3
Q ss_pred CCCcEEEEEECCCChh-hhhHHHHHHHHHHHhCC---CCceEEEEEeCCcc-----------------------------
Q psy7938 189 KSKHVLVEFYAPWCGH-CKQLAPIYDKLGEKFAD---RDDITIAKIDATVN----------------------------- 235 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~-C~~~~~~~~~la~~~~~---~~~v~~~~id~~~~----------------------------- 235 (305)
.++.++|.||++||++ |+...|.+.++.+.++. ..++.++.|+++..
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3689999999999998 99999999999999852 24677777776631
Q ss_pred cc-ccCCccccc---------------EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 236 EL-EHTKITSFP---------------TLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 236 ~~-~~~~i~~~P---------------tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
.. +.|++...| +++++.++++....+.|..+.+.|.+.|++..
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 11 468888888 88999887776778899999999998888653
No 295
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.96 E-value=9.6e-12 Score=97.73 Aligned_cols=75 Identities=12% Similarity=0.041 Sum_probs=49.6
Q ss_pred hHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
.+.++++++|||+||++|+.+.|.+.......+ .. + ..|+.||+|. +...++..+
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~--------------------~~---~-~~fv~V~vD~-e~~~~~~~~ 96 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQE--------------------MA---Q-NKFIMLNLMH-ETTDKNLSP 96 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHH--------------------HH---H-HTCEEEEESS-CCSCGGGCT
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHH--------------------Hh---h-cCeEEEEecC-CchhhHhhc
Confidence 345678999999999999999888776522111 11 1 1244555541 223457889
Q ss_pred CCCCCCCCeEEEEe-cCcCceec
Q psy7938 111 GMSKDEVPSLRLIR-LEEDMAKY 132 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~-~~~~~~~~ 132 (305)
+|. ++||+++|+ .|+.+.+.
T Consensus 97 ~v~--~~PT~~f~~~~G~~v~~~ 117 (151)
T 3ph9_A 97 DGQ--YVPRIMFVDPSLTVRADI 117 (151)
T ss_dssp TCC--CSSEEEEECTTSCBCTTC
T ss_pred CCC--CCCEEEEECCCCCEEEEE
Confidence 997 999999999 55544444
No 296
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.96 E-value=1e-09 Score=87.62 Aligned_cols=88 Identities=13% Similarity=0.184 Sum_probs=70.3
Q ss_pred CCCcEEEEEECCCChh-hhhHHHHHHHHHHHhCCC--CceEEEEEeCCccc-----------------------------
Q psy7938 189 KSKHVLVEFYAPWCGH-CKQLAPIYDKLGEKFADR--DDITIAKIDATVNE----------------------------- 236 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~-C~~~~~~~~~la~~~~~~--~~v~~~~id~~~~~----------------------------- 236 (305)
.++.++|.||++||++ |+...|.+.++.+.++.. .++.++.|+++...
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4789999999999997 999999999999998643 26888888876421
Q ss_pred c-cc---------------CCcccccEEEEEeCCCceEEeeeCCC--CHHHHHHHHHhc
Q psy7938 237 L-EH---------------TKITSFPTLKLYAKDDNRVIDYNGER--VLEALSNFVESG 277 (305)
Q Consensus 237 ~-~~---------------~~i~~~Ptl~~f~~g~~~~~~~~g~~--~~~~l~~fi~~~ 277 (305)
. +. |++.++|++++++ +++....+.|.. +.+.|.+.|++.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 0 11 3467899999999 777677788887 899999998764
No 297
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.95 E-value=4.1e-09 Score=83.33 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=72.7
Q ss_pred CCCcEEEEEECCCChh-hhhHHHHHHHHHHHhCCC---CceEEEEEeCCcc-------------------------c---
Q psy7938 189 KSKHVLVEFYAPWCGH-CKQLAPIYDKLGEKFADR---DDITIAKIDATVN-------------------------E--- 236 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~-C~~~~~~~~~la~~~~~~---~~v~~~~id~~~~-------------------------~--- 236 (305)
.++.++|.||++||++ |....|.+.++...++.. .++.++.|+++.. +
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3789999999999998 999999999999998531 3677777766541 1
Q ss_pred -c-ccCCccccc---------------EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 237 -L-EHTKITSFP---------------TLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 237 -~-~~~~i~~~P---------------tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
. +.|++...| +++++.++++....+.|..+.+.|.+.|.+..
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 2 578899999 88888887776778899999999999887643
No 298
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.95 E-value=7.7e-11 Score=91.59 Aligned_cols=110 Identities=9% Similarity=0.042 Sum_probs=71.2
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+. ++ ..+.+++.||++||++|+...|.+.++...+
T Consensus 8 G~~~p~~~l~~~~g~~~~l~--~~-----~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~-------------------- 60 (148)
T 3hcz_A 8 GKKAPNLYMTDTTGTYRYLY--DV-----QAKYTILFFWDSQCGHCQQETPKLYDWWLKN-------------------- 60 (148)
T ss_dssp TSBCCCCCCBCTTSCBCCGG--GC-----CCSEEEEEEECGGGCTTCSHHHHHHHHHHHH--------------------
T ss_pred CCcCCceEEecCCCCEEEhH--Hc-----CCCEEEEEEECCCCccHHHHHHHHHHHHHHh--------------------
Confidence 55677777766665555542 21 1256888999999999998877666662222
Q ss_pred HHhhcCc-eEEEEEEeCCchhHHH-------------------------HHHHcCCCCCCCCeEEEEecCcCc-eeccCC
Q psy7938 83 EFLAGNL-KVLFVTINTDEEDHQK-------------------------ILEFFGMSKDEVPSLRLIRLEEDM-AKYKPA 135 (305)
Q Consensus 83 ~~~~~~~-~v~~~~vd~~~~~~~~-------------------------l~~~~~I~~~~~Ptl~~~~~~~~~-~~~~~~ 135 (305)
++ .+.|+.|+++ +... ++..|||. ++|++++++..+.+ ..+
T Consensus 61 -----~~~~~~~v~v~~d--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~--~~P~~~lid~~G~i~~~~--- 128 (148)
T 3hcz_A 61 -----RAKGIQVYAANIE--RKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIY--ATPVLYVLDKNKVIIAKR--- 128 (148)
T ss_dssp -----GGGTEEEEEEECC--SSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCC--SSCEEEEECTTCBEEEES---
T ss_pred -----ccCCEEEEEEEec--CCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcC--CCCEEEEECCCCcEEEec---
Confidence 23 3888888887 3333 89999998 99999999765442 333
Q ss_pred CCCCCHHHHHHHHHHH
Q psy7938 136 TPEISVDTVRSFVTEF 151 (305)
Q Consensus 136 ~~~~~~~~l~~fv~~~ 151 (305)
.|..+.+++.+.+.+.
T Consensus 129 ~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 129 IGYENLDDFLVQYEKS 144 (148)
T ss_dssp CCGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 2333444444444433
No 299
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.94 E-value=6.4e-11 Score=92.98 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=78.3
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. ++ . +.+++.||++||++|+...|.+.++.
T Consensus 8 g~~~p~f~l~~~~g~~~~l~--~~-----~-k~vll~f~~~~C~~C~~~~~~l~~l~----------------------- 56 (154)
T 3ia1_A 8 GEPLPDFLLLDPKGQPVTPA--TV-----S-KPAVIVFWASWCTVCKAEFPGLHRVA----------------------- 56 (154)
T ss_dssp BEECCCCCEECTTSCEECTT--TS-----C-SSEEEEEECTTCHHHHHHHHHHHHHH-----------------------
T ss_pred CCcCCceEEECCCCCEechH--Hc-----C-CeEEEEEEcccChhHHHHHHHHHHHH-----------------------
Confidence 34577777777766655552 21 2 67899999999999987776665552
Q ss_pred HHhhcCceEEEEEEeCC---c----------------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCC
Q psy7938 83 EFLAGNLKVLFVTINTD---E----------------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPAT 136 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~---~----------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~ 136 (305)
.++ .+.|+.|+++ . .....+++.|||. ++|++++++..+. ...+ .
T Consensus 57 --~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~ 127 (154)
T 3ia1_A 57 --EET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL--GQPWTFVVDREGKVVALF---A 127 (154)
T ss_dssp --HHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC--SSCEEEEECTTSEEEEEE---E
T ss_pred --HHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC--cccEEEEECCCCCEEEEE---c
Confidence 222 3556666661 0 1567899999998 9999999975443 3344 3
Q ss_pred CCCCHHHHHHHHHHHHcC
Q psy7938 137 PEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 137 ~~~~~~~l~~fv~~~~~~ 154 (305)
|..+.++|.+++.+...+
T Consensus 128 g~~~~~~l~~~l~~~~~~ 145 (154)
T 3ia1_A 128 GRAGREALLDALLLAGAD 145 (154)
T ss_dssp SBCCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHhccCc
Confidence 678899999999998754
No 300
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.94 E-value=9.7e-11 Score=83.05 Aligned_cols=75 Identities=13% Similarity=0.223 Sum_probs=57.2
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE 116 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~ 116 (305)
|+.|+++||++|+.+.|++.+.+.. .+.+||.+ ++++++++||+ .
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~------------------------------~~~~vdid--~~~~l~~~~g~---~ 47 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAG------------------------------AFFSVFID--DDAALESAYGL---R 47 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCC------------------------------CEEEEECT--TCHHHHHHHTT---T
T ss_pred EEEEECCCCchHHHHHHHHHHHHHh------------------------------heEEEECC--CCHHHHHHhCC---C
Confidence 5689999999999888877766111 16789999 78899999999 4
Q ss_pred CCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 117 VPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 117 ~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+|++++ ..|+.+ . |..+.+.|++++...+.
T Consensus 48 vPtl~~-~~G~~v--~----g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 48 VPVLRD-PMGREL--D----WPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp CSEEEC-TTCCEE--E----SCCCHHHHHHHHHTCC-
T ss_pred cCeEEE-ECCEEE--e----CCCCHHHHHHHHHHHHH
Confidence 999988 555332 1 56788999999987643
No 301
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.94 E-value=2.9e-10 Score=89.04 Aligned_cols=93 Identities=11% Similarity=0.040 Sum_probs=67.1
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch------------
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE------------ 101 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------ 101 (305)
+.+++.||++||++|+...|.+.++...++ ...+.|+.|+++..
T Consensus 25 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~------------------------~~~v~vv~v~~d~~~~~~~~~~~~~~ 80 (151)
T 3raz_A 25 PVRIVNLWATWCGPCRKEMPAMSKWYKAQK------------------------KGSVDMVGIALDTSDNIGNFLKQTPV 80 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHTSC------------------------TTTEEEEEEESSCHHHHHHHHHHSCC
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhc------------------------cCCeEEEEEECCChHHHHHHHHHcCC
Confidence 578899999999999988776666522221 23477777776521
Q ss_pred ----------hHHHHHHHcC--CCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHcCc
Q psy7938 102 ----------DHQKILEFFG--MSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 102 ----------~~~~l~~~~~--I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~~~ 155 (305)
....+++.|| +. ++|++++++..+. ...+ .|..+.++|.+++.....+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~~~~~~l~~~l~~l~~~~ 142 (151)
T 3raz_A 81 SYPIWRYTGANSRNFMKTYGNTVG--VLPFTVVEAPKCGYRQTI---TGEVNEKSLTDAVKLAHSKC 142 (151)
T ss_dssp SSCEEEECCSCHHHHHHTTTCCSC--CSSEEEEEETTTTEEEEC---CSCCCHHHHHHHHHHHHTC-
T ss_pred CCceEecCccchHHHHHHhCCccC--CCCEEEEECCCCcEEEEE---CCCCCHHHHHHHHHHHHHHh
Confidence 3456888899 76 9999999986544 2334 37789999999999987654
No 302
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.92 E-value=4.6e-08 Score=83.33 Aligned_cols=162 Identities=14% Similarity=0.106 Sum_probs=116.6
Q ss_pred HhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecC-------cCceeccCCCCCCCHHHHHHHHHHHHcCcc
Q psy7938 84 FLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLE-------EDMAKYKPATPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 84 ~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~-------~~~~~~~~~~~~~~~~~l~~fv~~~~~~~~ 156 (305)
+..+++.+.|+.+.. .+++..++++ + |++++|+++ +....|.+. +.++.++|.+|+....
T Consensus 48 A~~lr~~~~F~~t~~-----~~v~~~~~v~--~-p~ivlfk~~~~~~kfde~~~~y~g~-~~~~~~~l~~fi~~~~---- 114 (250)
T 3ec3_A 48 ANTLREDYKFHHTFS-----TEIAKFLKVS--L-GKLVLMQPEKFQSKYEPRMHVMDVQ-GSTEASAIKDYVVKHA---- 114 (250)
T ss_dssp HHHHTTTCCEEEECC-----HHHHHHHTCC--S-SEEEEECCGGGCCTTSCSCEEEECC-TTSCHHHHHHHHHHHS----
T ss_pred HHhhhcCcEEEEECc-----HHHHHHcCCC--C-CeEEEEecchhhccccccceeccCC-CCCCHHHHHHHHHHcC----
Confidence 445567788988642 4678899996 4 999999863 222344211 4689999999999982
Q ss_pred cccccCCCCCCccccCCcEEecccChhHHHhcCCCcEEEEEECC-CC---h-hhhhHHHHHHHHHHHhCCCCceEEEEEe
Q psy7938 157 KQHLLSQPLPEDWDKNAVKVLVASNFDEIAFDKSKHVLVEFYAP-WC---G-HCKQLAPIYDKLGEKFADRDDITIAKID 231 (305)
Q Consensus 157 ~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~~~~~~~lv~f~~~-~C---~-~C~~~~~~~~~la~~~~~~~~v~~~~id 231 (305)
-..|.+++..++..+. .++++++.|+.. .+ . ....+...+.++|+.++ ++.|+.+|
T Consensus 115 --------------~Plv~e~t~~n~~~~~--~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k---ki~F~~~d 175 (250)
T 3ec3_A 115 --------------LPLVGHRKTSNDAKRY--SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP---EYTFAIAD 175 (250)
T ss_dssp --------------SCTEEEECTTTHHHHS--CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT---TSEEEEEE
T ss_pred --------------CCceeecCccchhhhh--ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc---ceeEEEEc
Confidence 2348999999998866 367877778753 22 2 34557889999999996 68899899
Q ss_pred CCcccc--ccCCccc--c-cEEEEEeCCCceEEeee-CCCCHHHHHHHHHhcC
Q psy7938 232 ATVNEL--EHTKITS--F-PTLKLYAKDDNRVIDYN-GERVLEALSNFVESGG 278 (305)
Q Consensus 232 ~~~~~~--~~~~i~~--~-Ptl~~f~~g~~~~~~~~-g~~~~~~l~~fi~~~~ 278 (305)
+..... +.+++.. + |.++++..++. ...+. +..+.+.|.+|+.+-.
T Consensus 176 ~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~-ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 176 EEDYATEVKDLGLSESGGDVNAAILDESGK-KFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp TTTTHHHHHHTTCSSCSCSCEEEEECTTSC-EEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCCcEEEEEcCCCc-eecCCcccCCHHHHHHHHHHHH
Confidence 876543 6778763 4 57888775544 45555 6789999999999753
No 303
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.90 E-value=1.4e-10 Score=89.91 Aligned_cols=109 Identities=11% Similarity=0.056 Sum_probs=73.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeee---ecccccccCCCCCcchhhhhhh
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIH---LEEDMAKYKPASPEINVDTVRS 79 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~---~~~~~~~~~~~~~~~~~~~~~~ 79 (305)
+...|.+.+...+...+.+. ++. + +.+++.|||+||++|+...|.+.+ +...+
T Consensus 8 G~~ap~f~l~~~~g~~~~l~--~~~----g-k~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~----------------- 63 (142)
T 3eur_A 8 GTKALNFTYTLDSGVKGTLY--QFP----A-EYTLLFINNPGCHACAEMIEGLKASPVINGFT----------------- 63 (142)
T ss_dssp TSBCCCCEEEETTSCEEETT--TCC----C-SEEEEEECCSSSHHHHHHHHHHHHCHHHHHHH-----------------
T ss_pred CCccCCcEEEcCCCCEeeHH--HcC----C-CEEEEEEECCCCccHHHHHHHHhhhHHHHHHh-----------------
Confidence 56689999988877777663 222 2 578889999999999987776666 42222
Q ss_pred HHHHHhhcCceEEEEEEeCCchh----------------------HHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCC
Q psy7938 80 FVTEFLAGNLKVLFVTINTDEED----------------------HQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATP 137 (305)
Q Consensus 80 ~~~~~~~~~~~v~~~~vd~~~~~----------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~ 137 (305)
.. ..+.++.|+.+... ...+++.|+|. ++|++++++..+.+ .+.
T Consensus 64 -----~~--~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~--~~P~~~lid~~G~i-~~~---- 129 (142)
T 3eur_A 64 -----AA--KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLR--AIPTLYLLDKNKTV-LLK---- 129 (142)
T ss_dssp -----HT--TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCT--TCSEEEEECTTCBE-EEE----
T ss_pred -----cc--CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCC--cCCeEEEECCCCcE-Eec----
Confidence 11 34666667666321 12357889998 99999999866542 221
Q ss_pred CCCHHHHHHHHH
Q psy7938 138 EISVDTVRSFVT 149 (305)
Q Consensus 138 ~~~~~~l~~fv~ 149 (305)
..+.+++.+|+.
T Consensus 130 ~~~~~~l~~~l~ 141 (142)
T 3eur_A 130 DATLQKVEQYLA 141 (142)
T ss_dssp EECHHHHHHHHH
T ss_pred CCCHHHHHHHHh
Confidence 235678888775
No 304
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.90 E-value=3.7e-10 Score=86.17 Aligned_cols=108 Identities=13% Similarity=0.137 Sum_probs=74.0
Q ss_pred CCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHh
Q psy7938 6 VPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFL 85 (305)
Q Consensus 6 ~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (305)
.|.+.+...+...+.+. ++ ..+.+++.||++||++|+...|.+.++. .
T Consensus 2 ~p~f~l~~~~g~~~~l~--~~-----~gk~~lv~f~~~~C~~C~~~~~~l~~~~-------------------------~ 49 (138)
T 4evm_A 2 VADFELMGVDGKTYRLS--DY-----KGKKVYLKFWASWCSICLASLPDTDEIA-------------------------K 49 (138)
T ss_dssp CCCCEEEBTTSCEEEGG--GG-----TTSEEEEEECCTTCHHHHHHHHHHHHHH-------------------------H
T ss_pred CCcceeECCCCCEEEHH--Hh-----CCCEEEEEEEcCcCHHHHHHHHHHHHHH-------------------------H
Confidence 57778877776666663 11 2356888999999999987776665552 2
Q ss_pred hcCceEEEEEEeCCc--------------------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCC
Q psy7938 86 AGNLKVLFVTINTDE--------------------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPE 138 (305)
Q Consensus 86 ~~~~~v~~~~vd~~~--------------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~ 138 (305)
.+...+.++.|+++. .....+++.|||. ++|++++++..+. ...+ .|.
T Consensus 50 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~ 124 (138)
T 4evm_A 50 EAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVR--SYPTQAFIDKEGKLVKTH---PGF 124 (138)
T ss_dssp TCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCC--SSSEEEEECTTCCEEEEE---ESC
T ss_pred HhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcc--cCCeEEEECCCCcEEEee---cCC
Confidence 233456666664321 0345789999998 9999999975544 2344 267
Q ss_pred CCHHHHHHHHHH
Q psy7938 139 ISVDTVRSFVTE 150 (305)
Q Consensus 139 ~~~~~l~~fv~~ 150 (305)
.+.+++.+++.+
T Consensus 125 ~~~~~l~~~l~~ 136 (138)
T 4evm_A 125 MEKDAILQTLKE 136 (138)
T ss_dssp CCHHHHHHHHHH
T ss_pred CcHHHHHHHHHh
Confidence 788899888865
No 305
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.90 E-value=2.9e-10 Score=89.72 Aligned_cols=116 Identities=7% Similarity=0.014 Sum_probs=74.6
Q ss_pred CCCCCCeEEEEe-eccCceecCCCCCCCChhHHHHHhhhhhcCccccccc-ccceeeeecccccccCCCCCcchhhhhhh
Q psy7938 2 SKDEVPSLRLIR-LEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKF-KKNLYIHLEEDMAKYKPASPEINVDTVRS 79 (305)
Q Consensus 2 ~~~~~p~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (305)
.+...|.+.+.. .+...+.+. .-.-+.+|+.||++||++|+. +.|.+.++...+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~-------~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~----------------- 60 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNE-------DLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMI----------------- 60 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHH-------HHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHS-----------------
T ss_pred CCCcCCCcccccccCCCccCHH-------HhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHh-----------------
Confidence 345566776666 344444331 111357889999999999987 366666663322
Q ss_pred HHHHHhhcCc-eEEEEEEeCCc--------------------------hhHHH------HHHHcCCCCCCCCeEEEEecC
Q psy7938 80 FVTEFLAGNL-KVLFVTINTDE--------------------------EDHQK------ILEFFGMSKDEVPSLRLIRLE 126 (305)
Q Consensus 80 ~~~~~~~~~~-~v~~~~vd~~~--------------------------~~~~~------l~~~~~I~~~~~Ptl~~~~~~ 126 (305)
++ .+.|+.|+++. ..... +++.|||. ++|++++++..
T Consensus 61 --------~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~--~~P~~~lid~~ 130 (160)
T 3lor_A 61 --------DESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLE--GTPSIILADRK 130 (160)
T ss_dssp --------CTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCC--SSSEEEEECTT
T ss_pred --------CcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccC--ccceEEEECCC
Confidence 22 26666665420 01122 88999998 99999999854
Q ss_pred cC-ceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 127 ED-MAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 127 ~~-~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
+. ...+ .|..+.+++.+.+...++.
T Consensus 131 G~i~~~~---~g~~~~~~l~~~i~~ll~~ 156 (160)
T 3lor_A 131 GRIRQVQ---FGQVDDFVLGLLLGSLLSE 156 (160)
T ss_dssp SBEEEEE---ESCCCHHHHHHHHHHHHTC
T ss_pred CcEEEEe---cCcCCHHHHHHHHHHHHhc
Confidence 43 3344 2677899999999998753
No 306
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.90 E-value=3.4e-09 Score=84.79 Aligned_cols=89 Identities=21% Similarity=0.215 Sum_probs=69.7
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------c-c----c------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------N-E----L------------------ 237 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~-~----~------------------ 237 (305)
.+++++|.||++||++|+ ..|.+.++.+.+++ .++.++.|+++. . . .
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~ 108 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKD-EGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNG 108 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG-GTEEEEEEEECSCC------------------CCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc-CCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCC
Confidence 478999999999999999 99999999999975 357777776520 0 0 0
Q ss_pred ------------ccCCccccc------EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 238 ------------EHTKITSFP------TLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 238 ------------~~~~i~~~P------tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
..+++.++| +++++.++++...++.|..+.+.|.+.|++...
T Consensus 109 ~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (171)
T 3cmi_A 109 GNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELLK 168 (171)
T ss_dssp TTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHHT
T ss_pred ccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 135788899 888888777767788898888888888887543
No 307
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.42 E-value=1.6e-10 Score=89.37 Aligned_cols=73 Identities=26% Similarity=0.502 Sum_probs=56.2
Q ss_pred CC-cEEEEEECCCChhhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcc--------------------------cc-ccC
Q psy7938 190 SK-HVLVEFYAPWCGHCKQLAPIYDKLGEKFADR-DDITIAKIDATVN--------------------------EL-EHT 240 (305)
Q Consensus 190 ~~-~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~--------------------------~~-~~~ 240 (305)
++ +++|.||++||++|+.+.|.+.++++.++.. .++.++.|+++.. .. +.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 56 9999999999999999999999999998532 3566666665533 12 678
Q ss_pred CcccccEEEEEeCCCceEEeeeC
Q psy7938 241 KITSFPTLKLYAKDDNRVIDYNG 263 (305)
Q Consensus 241 ~i~~~Ptl~~f~~g~~~~~~~~g 263 (305)
+|.++|++++++++++ +....|
T Consensus 105 ~v~~~P~~~lid~~G~-i~~~~~ 126 (143)
T 2lus_A 105 GITGIPALVIVKKDGT-LISMNG 126 (143)
Confidence 9999999999996666 333344
No 308
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.89 E-value=1.8e-10 Score=89.14 Aligned_cols=115 Identities=9% Similarity=0.167 Sum_probs=74.5
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+. ++. -+.+++.||++||++|+...|.+.++....+.
T Consensus 4 G~~~p~f~l~~~~g~~~~l~--~~~-----gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~------------------ 58 (142)
T 3ewl_A 4 GMKAADFTYVTVHGDNSRMS--RLK-----AQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEM------------------ 58 (142)
T ss_dssp TSBCCCCEEECTTCCEEEGG--GCC-----CSEEEEEECCSSCHHHHHHHHHHHTCHHHHHH------------------
T ss_pred CCcCCCCEEECCCCCEEEhh--hcC-----CCEEEEEEECCCCccHHHHHHHHHHhHHHHHH------------------
Confidence 56789999988877777663 221 25788899999999999876666552111111
Q ss_pred HHhhcCceEEEEEEeCCchh--HH------------------HH--HHHcCCCCCCCCeEEEEecCcCceeccCCCCCCC
Q psy7938 83 EFLAGNLKVLFVTINTDEED--HQ------------------KI--LEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEIS 140 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~~~--~~------------------~l--~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~ 140 (305)
+.. ..+.++.|+++... .. .+ ++.|||. ++|++++++..+. ..+ +..+
T Consensus 59 -~~~--~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~--~~P~~~lid~~G~-i~~----~~~~ 128 (142)
T 3ewl_A 59 -VEN--GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIR--ATPTIYLLDGRKR-VIL----KDTS 128 (142)
T ss_dssp -HHH--TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCC--SSSEEEEECTTCB-EEE----CSCC
T ss_pred -hcc--CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCC--CCCeEEEECCCCC-EEe----cCCC
Confidence 111 23777777766211 11 12 3389998 9999999986544 233 3578
Q ss_pred HHHHHHHHHHHH
Q psy7938 141 VDTVRSFVTEFL 152 (305)
Q Consensus 141 ~~~l~~fv~~~~ 152 (305)
.+++.+++.+..
T Consensus 129 ~~~l~~~l~~~~ 140 (142)
T 3ewl_A 129 MEQLIDYLATQA 140 (142)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHHHc
Confidence 899999988653
No 309
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.88 E-value=1.1e-10 Score=101.08 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=56.8
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc----hhHHHHHHH
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE----EDHQKILEF 109 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~----~~~~~l~~~ 109 (305)
+..+++||||||+||+.++|.++++++.+ . ++||+. ++++++|++
T Consensus 198 ~~~vV~F~A~WC~~Ck~l~p~le~lA~~l--------------------------~-----~Vd~d~~d~~~~~~~la~~ 246 (291)
T 3kp9_A 198 QIGGTMYGAYWCPHCQDQKELFGAAFDQV--------------------------P-----YVECSPNGPGTPQAQECTE 246 (291)
T ss_dssp HTTCEEEECTTCHHHHHHHHHHGGGGGGS--------------------------C-----EEESCSSCSSSCCCHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHc--------------------------C-----EEEEeecCchhhHHHHHHH
Confidence 44578899999999999999999884222 1 345541 247899999
Q ss_pred cCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 110 FGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
+||+ ++||+.+ +| ..+ .|.++.++|.+|+.-
T Consensus 247 ~gI~--~vPT~~i--~G---~~~---~G~~~~~~L~~~l~~ 277 (291)
T 3kp9_A 247 AGIT--SYPTWII--NG---RTY---TGVRSLEALAVASGY 277 (291)
T ss_dssp TTCC--STTEEEE--TT---EEE---ESCCCHHHHHHHTCC
T ss_pred cCCc--ccCeEEE--CC---EEe---cCCCCHHHHHHHHCC
Confidence 9998 9999655 44 345 378899999998754
No 310
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.88 E-value=3.5e-10 Score=88.62 Aligned_cols=118 Identities=17% Similarity=0.201 Sum_probs=78.7
Q ss_pred CCCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 2 SKDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 2 ~~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
.++..|.+.+...+...+.+. .+ ..+.+|+.||++||++|+...|.+.++.
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~--~~-----~gk~vll~f~~~~C~~C~~~~~~l~~~~---------------------- 54 (154)
T 3kcm_A 4 EENPAPDFTLNTLNGEVVKLS--DL-----KGQVVIVNFWATWCPPCREEIPSMMRLN---------------------- 54 (154)
T ss_dssp TTSBCCCCEEECTTSCEEEGG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHH----------------------
T ss_pred CCCCCCCeEEEcCCCCEEehh--hc-----CCCEEEEEEECCCCHHHHHHHHHHHHHH----------------------
Confidence 367789999988877766663 11 2357889999999999987766665552
Q ss_pred HHHhhcCc-eEEEEEEeCCch---------------------hHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCC
Q psy7938 82 TEFLAGNL-KVLFVTINTDEE---------------------DHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPE 138 (305)
Q Consensus 82 ~~~~~~~~-~v~~~~vd~~~~---------------------~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~ 138 (305)
.++.+ .+.|+.|+++.. ....+++.|||. ++|++++++..+. ..++.+. ..
T Consensus 55 ---~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~g~-~~ 128 (154)
T 3kcm_A 55 ---AAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTT--GVPETFVIDRHGVILKKVVGA-ME 128 (154)
T ss_dssp ---HHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCC--SBCEEEEECTTSBEEEEEESC-CC
T ss_pred ---HHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCC--CCCeEEEECCCCcEEEEEcCC-Cc
Confidence 22223 577777777732 113488999998 9998888875544 3344322 23
Q ss_pred CCHHHHHHHHHHHHcC
Q psy7938 139 ISVDTVRSFVTEFLAG 154 (305)
Q Consensus 139 ~~~~~l~~fv~~~~~~ 154 (305)
.+.+++.+++.+...+
T Consensus 129 ~~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 129 WDHPEVIAFLNNELSK 144 (154)
T ss_dssp TTSHHHHHHHHTC---
T ss_pred cccHHHHHHHHHHHHH
Confidence 4677899998876543
No 311
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.88 E-value=8e-09 Score=83.97 Aligned_cols=90 Identities=16% Similarity=0.121 Sum_probs=70.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------c-cc----c-c---------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------N-EL----E-H--------------- 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~-~~----~-~--------------- 239 (305)
.+++++|.||++||++|+...|.+.++.+.+++. ++.++.|+++. . .. + .
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~-~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~ 123 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 123 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG-TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC-CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCC
Confidence 4789999999999999999999999999999753 57777776541 1 10 1 1
Q ss_pred -----------------CCccccc---EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 240 -----------------TKITSFP---TLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 240 -----------------~~i~~~P---tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
+++..+| +++++.+++.....+.|..+.+.|.+.|++...
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 124 ENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp C-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred cchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 1334567 999998888767889999999999999988764
No 312
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.87 E-value=3.8e-09 Score=76.91 Aligned_cols=79 Identities=15% Similarity=0.212 Sum_probs=60.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC--cccc--ccCCcccccEEEEEeCCCceEEeeeCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT--VNEL--EHTKITSFPTLKLYAKDDNRVIDYNGE 264 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~--~~~~--~~~~i~~~Ptl~~f~~g~~~~~~~~g~ 264 (305)
...+.++.|+++||++|+.+.+.+++++. ++.+..+|.+ .+.. .+++ .++|+++ .+|+. . ..|.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~------~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~~--~-~~~g 81 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD------RFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQF--L-MMHR 81 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS------SSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSSE--E-EESS
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh------CCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCEE--E-EecC
Confidence 35678999999999999999999887642 3788888987 4432 6899 9999863 45543 3 4566
Q ss_pred CCHHHHHHHHHhcCC
Q psy7938 265 RVLEALSNFVESGGK 279 (305)
Q Consensus 265 ~~~~~l~~fi~~~~~ 279 (305)
.+.+.|.++|.+...
T Consensus 82 ~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 82 VNTSKLEKQLRKLSG 96 (100)
T ss_dssp CCHHHHHHHHHSSSC
T ss_pred CCHHHHHHHHHHHHh
Confidence 889999999987653
No 313
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.87 E-value=4.7e-10 Score=87.05 Aligned_cols=92 Identities=14% Similarity=0.068 Sum_probs=66.5
Q ss_pred CCCCCe-EEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPS-LRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~-i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
++.+|. +.+...+...+.+. ++ .-+.+++.||++||++|+.+.|.+.++.
T Consensus 4 ~~~~P~~f~l~~~~g~~~~l~--~~-----~gk~vll~F~a~wC~~C~~~~~~l~~l~---------------------- 54 (144)
T 1i5g_A 4 KKFFPYSTNVLKGAAADIALP--SL-----AGKTVFFYFSASWCPPSRAFTPQLIDFY---------------------- 54 (144)
T ss_dssp TTSCSSCSEEEETTEEEEEGG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHH----------------------
T ss_pred hhhCCCceEEEcCCCCEecHH--Hc-----CCCEEEEEEECCCCHHHHHHHHHHHHHH----------------------
Confidence 356788 88888776666662 11 1256889999999999998877776662
Q ss_pred HHHhhcC--ceEEEEEEeCCch----------------------hHHHHHHHcCCCCCCCCeEEEEe-cCcC
Q psy7938 82 TEFLAGN--LKVLFVTINTDEE----------------------DHQKILEFFGMSKDEVPSLRLIR-LEED 128 (305)
Q Consensus 82 ~~~~~~~--~~v~~~~vd~~~~----------------------~~~~l~~~~~I~~~~~Ptl~~~~-~~~~ 128 (305)
.+++ ..+.++.|+++.. ....+++.|||. ++|++++++ ..+.
T Consensus 55 ---~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~~G~ 121 (144)
T 1i5g_A 55 ---KAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVK--SIPTLVGVEADSGN 121 (144)
T ss_dssp ---HHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCC--SSSEEEEEETTTCC
T ss_pred ---HHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCC--CCCEEEEEECCCCc
Confidence 2222 3688888888741 246899999998 999999998 4433
No 314
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.87 E-value=5.7e-09 Score=83.03 Aligned_cols=90 Identities=21% Similarity=0.194 Sum_probs=70.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------cc-c----c-cC--------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------NE-L----E-HT-------------- 240 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~~-~----~-~~-------------- 240 (305)
.++.++|.||++||++|+...|.+.++++.+++. ++.++.|+++. .. . + .+
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 109 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQ-GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNG 109 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCC
Confidence 4789999999999999999999999999999753 58888887642 10 0 1 21
Q ss_pred ---------------Cc--cccc---EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 241 ---------------KI--TSFP---TLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 241 ---------------~i--~~~P---tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
++ .++| +++++.++++...++.|..+.+.|.+.|++...
T Consensus 110 ~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 110 ENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp TTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred CchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 34 5678 889998877767788998888899999887653
No 315
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.87 E-value=6.2e-10 Score=87.65 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=76.1
Q ss_pred CCCCCeEEEEee--ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccc-cceeeeecccccccCCCCCcchhhhhhh
Q psy7938 3 KDEVPSLRLIRL--EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFK-KNLYIHLEEDMAKYKPASPEINVDTVRS 79 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (305)
++..|.+.+... +...+.+. ++ .-+.+|+.||++||++|+.. .|.+.++...++.
T Consensus 3 g~~aP~f~l~~~~~~g~~~~l~--~~-----~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~--------------- 60 (158)
T 3eyt_A 3 AMKAPELQIQQWFNSATDLTLA--DL-----RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPE--------------- 60 (158)
T ss_dssp CEECCCCCEEEEESCSSCCCTG--GG-----TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCT---------------
T ss_pred CCcCCCceehhhhcCCCccCHH--Hh-----CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCc---------------
Confidence 455778877763 33444331 21 13578999999999999985 7766666332210
Q ss_pred HHHHHhhcCceEEEEEEeCCch--------------------------hHH-----HHHHHcCCCCCCCCeEEEEecCcC
Q psy7938 80 FVTEFLAGNLKVLFVTINTDEE--------------------------DHQ-----KILEFFGMSKDEVPSLRLIRLEED 128 (305)
Q Consensus 80 ~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~-----~l~~~~~I~~~~~Ptl~~~~~~~~ 128 (305)
..+.|+.|+++.. ... .+++.|||. ++|++++++..+.
T Consensus 61 ---------~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~--~~P~~~lid~~G~ 129 (158)
T 3eyt_A 61 ---------DKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMR--GTPSLLLIDKAGD 129 (158)
T ss_dssp ---------TTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCC--SSSEEEEECTTSE
T ss_pred ---------CCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCC--CCCEEEEECCCCC
Confidence 2366666664200 011 589999998 9999999976544
Q ss_pred -ceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 129 -MAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 129 -~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
...+ .|..+.++|.+.+...++.
T Consensus 130 i~~~~---~g~~~~~~l~~~i~~ll~~ 153 (158)
T 3eyt_A 130 LRAHH---FGDVSELLLGAEIATLLGE 153 (158)
T ss_dssp EEEEE---ESCCCHHHHHHHHHHHHTS
T ss_pred EEEEE---eCCCCHHHHHHHHHHHhcc
Confidence 2334 2678899999999998854
No 316
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.38 E-value=2.4e-10 Score=88.40 Aligned_cols=94 Identities=7% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHH
Q psy7938 5 EVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEF 84 (305)
Q Consensus 5 ~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (305)
..|.+.|...+...+.+. + ...+...+++.||++||++|+...|.+.++...++.
T Consensus 3 ~~p~~~l~~~~g~~~~l~--~---~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~-------------------- 57 (143)
T 2lus_A 3 FIQGIKLVKKNRCEVNAN--E---ALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVD-------------------- 57 (143)
Confidence 457777776665555542 1 012223789999999999999888888777444311
Q ss_pred hhcCceEEEEEEeCCch-----------------------hHHHHHHHcCCCCCCCCeEEEEecCc
Q psy7938 85 LAGNLKVLFVTINTDEE-----------------------DHQKILEFFGMSKDEVPSLRLIRLEE 127 (305)
Q Consensus 85 ~~~~~~v~~~~vd~~~~-----------------------~~~~l~~~~~I~~~~~Ptl~~~~~~~ 127 (305)
....+.++.|+++.. ....+++.|||. ++|++++++..+
T Consensus 58 --~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~P~~~lid~~G 119 (143)
T 2lus_A 58 --DSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT--GIPALVIVKKDG 119 (143)
Confidence 012344444444411 225789999998 999999998543
No 317
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.86 E-value=8.9e-09 Score=83.89 Aligned_cols=90 Identities=17% Similarity=0.136 Sum_probs=71.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------cc-c----------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------NE-L---------------------- 237 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~~-~---------------------- 237 (305)
.+++++|.||++||++|+...|.+.++.+.+++. ++.++.|+++. .. .
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~ 125 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQ-GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNG 125 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSS
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcC-CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCc
Confidence 4789999999999999999999999999999753 57777777651 00 0
Q ss_pred ------------ccCCccccc------EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCC
Q psy7938 238 ------------EHTKITSFP------TLKLYAKDDNRVIDYNGERVLEALSNFVESGGK 279 (305)
Q Consensus 238 ------------~~~~i~~~P------tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~ 279 (305)
..+++.++| +++++.++++...++.|..+.+.|.+.|++...
T Consensus 126 ~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 126 ENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 014778899 888888777767788899899999999887643
No 318
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.85 E-value=9e-10 Score=86.09 Aligned_cols=113 Identities=9% Similarity=0.126 Sum_probs=78.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccc--cccccceeeeecccccccCCCCCcchhhhhhhH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKH--SKFKKNLYIHLEEDMAKYKPASPEINVDTVRSF 80 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~--c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (305)
++..|.+.+...+...+.+..+++ + -+.+++.||++||++ |+...|.+.++.
T Consensus 8 G~~~p~f~l~~~~g~~~~l~~~~~----~-gk~vll~F~a~~C~~v~C~~~~~~l~~l~--------------------- 61 (150)
T 3fw2_A 8 GKYAPFFSLPNAKGEKITRSSDAF----K-QKSLLINFWASWNDSISQKQSNSELREIY--------------------- 61 (150)
T ss_dssp TSBCCCCCEEBTTCCEECTTSTTT----T-TSEEEEEEECTTCCCHHHHHHHHHHHHHH---------------------
T ss_pred CCcCCccEeECCCCCEEecchhhh----C-CCEEEEEEEeCCCCchHHHHHHHHHHHHH---------------------
Confidence 566888888887777666631122 1 257899999999999 987776666652
Q ss_pred HHHHhhc-Cc-eEEEEEEeCCchh-----------------------HHHHHHHcCCCCCCCCeEEEEecCcCceeccCC
Q psy7938 81 VTEFLAG-NL-KVLFVTINTDEED-----------------------HQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPA 135 (305)
Q Consensus 81 ~~~~~~~-~~-~v~~~~vd~~~~~-----------------------~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~ 135 (305)
.++ ++ .+.|+.|+++... ...+++.|||. ++|++++++..+.+...
T Consensus 62 ----~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~--- 132 (150)
T 3fw2_A 62 ----KKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIY--KIPANILLSSDGKILAK--- 132 (150)
T ss_dssp ----HHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC--SSSEEEEECTTSBEEEE---
T ss_pred ----HHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCC--ccCeEEEECCCCEEEEc---
Confidence 222 22 3777777776321 34789999998 99999999765443222
Q ss_pred CCCCCHHHHHHHHHHHH
Q psy7938 136 TPEISVDTVRSFVTEFL 152 (305)
Q Consensus 136 ~~~~~~~~l~~fv~~~~ 152 (305)
..+.+++.+.+...+
T Consensus 133 --~~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 133 --NLRGEELKKKIENIV 147 (150)
T ss_dssp --SCCHHHHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHHH
Confidence 137788888888765
No 319
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.85 E-value=6.2e-09 Score=82.70 Aligned_cols=88 Identities=11% Similarity=0.082 Sum_probs=68.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----c-----ccc---------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----N-----ELE--------------------- 238 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----~-----~~~--------------------- 238 (305)
.++.++|.||++||++|+...|.+.++.+.+++ .++.++.|+++. . ...
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 108 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG-KGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNG 108 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSS
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc-CCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecC
Confidence 478999999999999999999999999999965 358888887642 0 000
Q ss_pred -----cC--------C-----cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 239 -----HT--------K-----ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 239 -----~~--------~-----i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
.+ + |..+|+++++.++++...++.|..+.+.|.+.|++.
T Consensus 109 ~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 109 SDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHH
Confidence 01 3 445689999988888677889988888888888764
No 320
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.84 E-value=6.8e-10 Score=87.62 Aligned_cols=113 Identities=11% Similarity=0.122 Sum_probs=75.2
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+. ++ .-+.+++.||++||++|+...|.+.++.
T Consensus 18 G~~~p~f~l~~~~g~~~~l~--~~-----~gk~vll~F~~~~C~~C~~~~~~l~~~~----------------------- 67 (158)
T 3hdc_A 18 GALAPNFKLPTLSGENKSLA--QY-----RGKIVLVNFWASWCPYCRDEMPSMDRLV----------------------- 67 (158)
T ss_dssp TSBCCCCEEECTTSCEEESG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHH-----------------------
T ss_pred CCcCCCceeEcCCCCEEehH--Hh-----CCCEEEEEEECCcCHHHHHHHHHHHHHH-----------------------
Confidence 45678888887766666552 11 2257889999999999987766666552
Q ss_pred HHhhcC-ceEEEEEEeCCc-----------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHH
Q psy7938 83 EFLAGN-LKVLFVTINTDE-----------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDT 143 (305)
Q Consensus 83 ~~~~~~-~~v~~~~vd~~~-----------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~ 143 (305)
.++. ..+.|+.|+++. .....+++.|||. ++|++++++..+. ...+.+. ...+..+
T Consensus 68 --~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~G~-~~~~~~~ 142 (158)
T 3hdc_A 68 --KSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGAN--RLPDTFIVDRKGIIRQRVTGG-IEWDAPK 142 (158)
T ss_dssp --HHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCC--SSSEEEEECTTSBEEEEEESC-CCTTSHH
T ss_pred --HHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCC--CcceEEEEcCCCCEEEEEeCC-CccchHH
Confidence 2222 468899999873 1256899999998 9999999976544 3344322 2344455
Q ss_pred HHHHHHH
Q psy7938 144 VRSFVTE 150 (305)
Q Consensus 144 l~~fv~~ 150 (305)
+.+.+..
T Consensus 143 ~~~~~~~ 149 (158)
T 3hdc_A 143 VVSYLKS 149 (158)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 5554443
No 321
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.84 E-value=1.9e-08 Score=79.58 Aligned_cols=86 Identities=13% Similarity=0.116 Sum_probs=66.0
Q ss_pred CCc-EEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc----------------------cc-ccCCccc
Q psy7938 190 SKH-VLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN----------------------EL-EHTKITS 244 (305)
Q Consensus 190 ~~~-~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~----------------------~~-~~~~i~~ 244 (305)
++. ++|.|| ++||++|+...|.+.++.+.+++. ++.++.|+.+.. .. +.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~-~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDY-DVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKG 106 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTT-CEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCC
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHc-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCC
Confidence 565 999999 999999999999999999999753 577777776521 11 6788999
Q ss_pred ----ccEEEEEeCCCceEEeeeCC-C---CHHHHHHHHHh
Q psy7938 245 ----FPTLKLYAKDDNRVIDYNGE-R---VLEALSNFVES 276 (305)
Q Consensus 245 ----~Ptl~~f~~g~~~~~~~~g~-~---~~~~l~~fi~~ 276 (305)
+|+++++.++++....+.|. . +.+.+.+.|++
T Consensus 107 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~ 146 (161)
T 3drn_A 107 FILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQ 146 (161)
T ss_dssp SSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHH
T ss_pred cCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHH
Confidence 99999999888867778882 2 34455555544
No 322
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.83 E-value=1.1e-09 Score=88.59 Aligned_cols=121 Identities=10% Similarity=0.062 Sum_probs=76.0
Q ss_pred CCCCCeEEEEee--ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhH
Q psy7938 3 KDEVPSLRLIRL--EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSF 80 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (305)
+...|.+.+... +...+.+. ++ .-+.+|+.||++||++|+...|.+.++...++.-
T Consensus 34 g~~~p~f~l~~~~~~g~~~~l~--~~-----~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~--------------- 91 (183)
T 3lwa_A 34 RQQLPDIGGDSLMEEGTQINLS--DF-----ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA--------------- 91 (183)
T ss_dssp CCCCCCCEEEBSSSTTCEEEGG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred CCCCCceeccccccCCcEecHH--Hh-----CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc---------------
Confidence 456788888887 66666652 21 1256888999999999987777666663332110
Q ss_pred HHHHhhcCceEEEEEEeCCc---hhHHHHHHHc---------------------CCCCCCCCeEEEEecCcCc-eeccCC
Q psy7938 81 VTEFLAGNLKVLFVTINTDE---EDHQKILEFF---------------------GMSKDEVPSLRLIRLEEDM-AKYKPA 135 (305)
Q Consensus 81 ~~~~~~~~~~v~~~~vd~~~---~~~~~l~~~~---------------------~I~~~~~Ptl~~~~~~~~~-~~~~~~ 135 (305)
-.....+|.|+.|+++. +....+++++ +|. ++|++++++..+.+ ..+
T Consensus 92 ---~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~--- 163 (183)
T 3lwa_A 92 ---GNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPAS--VIPTTIVLDKQHRPAAVF--- 163 (183)
T ss_dssp ---C---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTT--CCSEEEEECTTSCEEEEE---
T ss_pred ---CCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCCC--CCCeEEEECCCCcEEEEE---
Confidence 00001234899999884 1122333333 455 89988888765442 344
Q ss_pred CCCCCHHHHHHHHHHHHc
Q psy7938 136 TPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 136 ~~~~~~~~l~~fv~~~~~ 153 (305)
.|..+.++|.+++.+.+.
T Consensus 164 ~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 164 LREVTSKDVLDVALPLVD 181 (183)
T ss_dssp CSCCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHh
Confidence 266789999999998864
No 323
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.83 E-value=3.4e-10 Score=83.17 Aligned_cols=77 Identities=10% Similarity=0.140 Sum_probs=60.1
Q ss_pred HHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC
Q psy7938 35 SFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK 114 (305)
Q Consensus 35 ~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~ 114 (305)
..|+.|+++||++|+.+.|++.+++ ..+ + +.|..||.+ ++++++++||+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~-------------------------~e~-~-i~~~~vDId--~d~~l~~~ygv-- 78 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQ-------------------------KKS-W-FELEVINID--GNEHLTRLYND-- 78 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHH-------------------------HHS-C-CCCEEEETT--TCHHHHHHSTT--
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHH-------------------------Hhc-C-CeEEEEECC--CCHHHHHHhCC--
Confidence 3478999999999998888877762 221 3 788999999 77899999998
Q ss_pred CCCCeEEEEecCcCceeccCCCCCCCHHHHHHHH
Q psy7938 115 DEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFV 148 (305)
Q Consensus 115 ~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv 148 (305)
.+|++++|..|+.+ . .|..+.+.|++|+
T Consensus 79 -~VP~l~~~~dG~~v--~---~g~~~~~~L~~~L 106 (107)
T 2fgx_A 79 -RVPVLFAVNEDKEL--C---HYFLDSDVIGAYL 106 (107)
T ss_dssp -SCSEEEETTTTEEE--E---CSSCCCHHHHHHH
T ss_pred -CCceEEEEECCEEE--E---ecCCCHHHHHHHh
Confidence 49999998877542 2 2567888888876
No 324
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.82 E-value=9.4e-09 Score=83.07 Aligned_cols=89 Identities=16% Similarity=0.118 Sum_probs=69.9
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------c-cc----c-----------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------N-EL----E----------------- 238 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~-~~----~----------------- 238 (305)
.++.++|.||++||++|+...|.+.++++.+++ .++.++.|+++. . .. +
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g 126 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGP-HHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTG 126 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc-CCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCC
Confidence 478999999999999999999999999999975 358888887642 0 00 1
Q ss_pred -------cCCccccc-------EEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 239 -------HTKITSFP-------TLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 239 -------~~~i~~~P-------tl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
.+.+.++| +.+++.++++...++.|..+.+.|.+.|++..
T Consensus 127 ~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 127 TGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp TTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred ccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 12256789 88888877776778899999999999998653
No 325
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.82 E-value=7.9e-10 Score=85.98 Aligned_cols=87 Identities=18% Similarity=0.105 Sum_probs=63.7
Q ss_pred CCCCCe-EEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPS-LRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~-i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
++..|. +.+...+. .+.+. ++ .-+.+++.||++||++|+...|.+.++.
T Consensus 5 ~~~~P~~f~l~~~~g-~~~l~--~~-----~gk~vll~F~a~wC~~C~~~~p~l~~l~---------------------- 54 (146)
T 1o8x_A 5 DKYLPGIEKLRRGDG-EVEVK--SL-----AGKLVFFYFSASWCPPARGFTPQLIEFY---------------------- 54 (146)
T ss_dssp GGTSTTCCEEEETTE-EEEGG--GG-----TTCEEEEEEECTTCHHHHHHHHHHHHHH----------------------
T ss_pred HhhCCCceEEEcCCC-CCcHH--Hh-----CCCEEEEEEEccCCHHHHHHHHHHHHHH----------------------
Confidence 456788 78888776 66552 21 1246888999999999998877766662
Q ss_pred HHHhhcC--ceEEEEEEeCCch----------------------hHHHHHHHcCCCCCCCCeEEEEe
Q psy7938 82 TEFLAGN--LKVLFVTINTDEE----------------------DHQKILEFFGMSKDEVPSLRLIR 124 (305)
Q Consensus 82 ~~~~~~~--~~v~~~~vd~~~~----------------------~~~~l~~~~~I~~~~~Ptl~~~~ 124 (305)
.+++ ..+.++.|+++.. ....+++.|||. ++|++++++
T Consensus 55 ---~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~Pt~~lid 116 (146)
T 1o8x_A 55 ---DKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVE--SIPTLIGVD 116 (146)
T ss_dssp ---HHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCC--SSSEEEEEE
T ss_pred ---HHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCC--CCCEEEEEE
Confidence 2222 3678888887742 246899999998 999999998
No 326
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.81 E-value=7e-10 Score=88.11 Aligned_cols=109 Identities=10% Similarity=0.135 Sum_probs=75.1
Q ss_pred CCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHh
Q psy7938 6 VPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFL 85 (305)
Q Consensus 6 ~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (305)
.|.+.+...+...+.+. ++ .-+.+|+.||++||++|+...|.+.++ ..
T Consensus 17 ~p~~~l~~~~g~~~~l~--~~-----~gk~~lv~F~~~~C~~C~~~~~~l~~l-------------------------~~ 64 (165)
T 3ha9_A 17 EASFSLTTIDGEVISLN--NV-----GGDVVILWFMAAWCPSCVYMADLLDRL-------------------------TE 64 (165)
T ss_dssp HHCCCEEBTTSCEECGG--GC-----CSSEEEEEEECTTCTTHHHHHHHHHHH-------------------------HH
T ss_pred CCCCEeecCCCCEeeHH--Hh-----CCCEEEEEEECCCCcchhhhHHHHHHH-------------------------HH
Confidence 46666666665555552 21 125788999999999999877766666 23
Q ss_pred hcCceEEEEEEeCCc------------------hh--------------------HHHHHHHcCCCCCCCCeEEEEecCc
Q psy7938 86 AGNLKVLFVTINTDE------------------ED--------------------HQKILEFFGMSKDEVPSLRLIRLEE 127 (305)
Q Consensus 86 ~~~~~v~~~~vd~~~------------------~~--------------------~~~l~~~~~I~~~~~Ptl~~~~~~~ 127 (305)
+++ .+.|+.|+++. .. ...+++.|+|. ++|++++++..+
T Consensus 65 ~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~--~~P~~~lid~~G 141 (165)
T 3ha9_A 65 KYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVR--SIDYIVIMDKSS 141 (165)
T ss_dssp HCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCC--SSSEEEEEETTC
T ss_pred HcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCC--CceEEEEEcCCC
Confidence 334 67788887761 10 03788999998 999999998765
Q ss_pred CceeccCCCCCC-CHHHHHHHHHHHHc
Q psy7938 128 DMAKYKPATPEI-SVDTVRSFVTEFLA 153 (305)
Q Consensus 128 ~~~~~~~~~~~~-~~~~l~~fv~~~~~ 153 (305)
.+.. .|.. +.+.|.+++.+.+.
T Consensus 142 ~i~~----~g~~~~~~~l~~~l~~l~~ 164 (165)
T 3ha9_A 142 NVLY----AGTTPSLGELESVIKSVQG 164 (165)
T ss_dssp CEEE----EEESCCHHHHHHHHHHC--
T ss_pred cEEE----eCCCCCHHHHHHHHHHHhc
Confidence 5333 2566 88999999987654
No 327
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.80 E-value=1.4e-09 Score=88.42 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=79.7
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. ++. -+.+|+.||++||++|+...|.+.++..
T Consensus 10 g~~~p~f~l~~~~G~~~~l~--~~~-----gk~vlv~F~a~~C~~C~~~~~~l~~l~~---------------------- 60 (188)
T 2cvb_A 10 ESPLIDAELPDPRGGRYRLS--QFH-----EPLLAVVFMCNHCPYVKGSIGELVALAE---------------------- 60 (188)
T ss_dssp TCBCCCCEEECTTSCEEEGG--GCC-----SSEEEEEEECSSCHHHHTTHHHHHHHHH----------------------
T ss_pred CCCCCCceeecCCCCEEeHH--HhC-----CCEEEEEEECCCCccHHHHHHHHHHHHH----------------------
Confidence 45678888887776666663 221 1568899999999999977776666522
Q ss_pred HHhhcCceEEEEEEeCCc---------------------------hhHHHHHHHcCCCCCCCCeEEEEecCcCceeccC-
Q psy7938 83 EFLAGNLKVLFVTINTDE---------------------------EDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKP- 134 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~---------------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~- 134 (305)
++++++.|+.|+++. .....+++.|||. ++|++++++..+.+.....
T Consensus 61 ---~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~g~~ 135 (188)
T 2cvb_A 61 ---RYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRAL--RTPEVFLFDERRLLRYHGRV 135 (188)
T ss_dssp ---HTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCC--EESEEEEECTTCBEEEEECS
T ss_pred ---HhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCC--CCCeEEEECCCCcEEEEEec
Confidence 222336666666631 0235688999998 9999999976544322210
Q ss_pred C-----CCCCCHHHHHHHHHHHHcCcc
Q psy7938 135 A-----TPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 135 ~-----~~~~~~~~l~~fv~~~~~~~~ 156 (305)
. .+..+.++|.+.+...+.++.
T Consensus 136 ~~~~~~~g~~~~~~l~~~i~~ll~~~~ 162 (188)
T 2cvb_A 136 NDNPKDPSKVQSHDLEAAIEALLRGEE 162 (188)
T ss_dssp SSCTTCGGGCCCCHHHHHHHHHHTTCC
T ss_pred CCccccccccCHHHHHHHHHHHHcCCC
Confidence 0 123467899999999987643
No 328
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.80 E-value=1.2e-09 Score=85.83 Aligned_cols=113 Identities=13% Similarity=0.223 Sum_probs=71.9
Q ss_pred CCCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 2 SKDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 2 ~~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
.+...|.+.+...+...+.+. ++ .-+.+++.||++||++|+...|.+.++...+
T Consensus 11 ~g~~~p~f~l~~~~G~~~~l~--~~-----~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~------------------- 64 (152)
T 2lrt_A 11 KEASIIDIQLKDLKGNTRSLT--DL-----KGKVVLIDFTVYNNAMSAAHNLALRELYNKY------------------- 64 (152)
T ss_dssp CTTCSCCCCEEBTTSCEECTT--TG-----GGSEEEEEEECTTCHHHHHHHHHHHHHHHHH-------------------
T ss_pred cCCCCCCeEEEcCCCCEEeHH--Hh-----CCCEEEEEEEcCCChhhHHHHHHHHHHHHHh-------------------
Confidence 356688888887766666552 21 1357899999999999987766665552222
Q ss_pred HHHhhcCc-eEEEEEEeCCchhH---------------------HHHHHHcCCCCCCCCeEEEEecCcCc-eeccCCCCC
Q psy7938 82 TEFLAGNL-KVLFVTINTDEEDH---------------------QKILEFFGMSKDEVPSLRLIRLEEDM-AKYKPATPE 138 (305)
Q Consensus 82 ~~~~~~~~-~v~~~~vd~~~~~~---------------------~~l~~~~~I~~~~~Ptl~~~~~~~~~-~~~~~~~~~ 138 (305)
++ .+.++.|+++.... ..+++.|||. ++|++++++..+.+ ..+. |.
T Consensus 65 ------~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~---g~ 133 (152)
T 2lrt_A 65 ------ASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVT--NLPSVFLVNRNNELSARGE---NI 133 (152)
T ss_dssp ------GGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCC--SCSEEEEEETTTEEEEETT---TC
T ss_pred ------ccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcc--cCceEEEECCCCeEEEecC---CH
Confidence 22 37777777763221 1388999998 99999999865442 3332 44
Q ss_pred CCHHHHHHHHHHHHcC
Q psy7938 139 ISVDTVRSFVTEFLAG 154 (305)
Q Consensus 139 ~~~~~l~~fv~~~~~~ 154 (305)
.+ +.+.+...+.|
T Consensus 134 ~~---~e~~~~~~~~~ 146 (152)
T 2lrt_A 134 KD---LDEAIKKLLEG 146 (152)
T ss_dssp SC---HHHHHHHHHGG
T ss_pred HH---HHHHHHHHHhc
Confidence 44 44444444444
No 329
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.79 E-value=3.6e-10 Score=90.08 Aligned_cols=133 Identities=11% Similarity=0.060 Sum_probs=73.6
Q ss_pred CCCCCeEEEEee--ccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhH
Q psy7938 3 KDEVPSLRLIRL--EEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSF 80 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (305)
+...|.+.+... +...+... . ....+.+|+.||++||++|+.+.|.+.++...--.+..-+...+.+.+..+
T Consensus 25 G~~~P~f~l~~~~~~g~~~~~~--~----~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~v~~~~~~~~~~~~ 98 (168)
T 2b1k_A 25 GKPVPKFRLESLDNPGQFYQAD--V----LTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDDRQKAISW 98 (168)
T ss_dssp TSBCCCCEEEESSSTTCEEEGG--G----GCCSSCEEEEEECTTCHHHHHHHHHHHHHHHTTCCEEEEEESCCHHHHHHH
T ss_pred CCcCCCeEeecccCCCcEeehh--H----hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCChHHHHHH
Confidence 456788888877 44444431 1 012356788999999999998877766653220000000000011122222
Q ss_pred HHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 81 VTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 81 ~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+.+. .-....... + .+..++..|||. ++|+.++++..+. ...+ .|..+.+.+.+++.+.+.
T Consensus 99 ~~~~---~~~~~~~~~--d--~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~~~~~~l~~~l~~~l~ 160 (168)
T 2b1k_A 99 LKEL---GNPYALSLF--D--GDGMLGLDLGVY--GAPETFLIDGNGIIRYRH---AGDLNPRVWEEEIKPLWE 160 (168)
T ss_dssp HHHH---CCCCSEEEE--E--TTCHHHHHHTCC--SSSEEEEECTTSBEEEEE---ESCCCHHHHHHTTHHHHH
T ss_pred HHHc---CCCCceeeE--C--cchHHHHHcCcc--ccCEEEEECCCCeEEEEE---eCCCCHHHHHHHHHHHHH
Confidence 2211 001111112 2 346789999998 9998777765433 2344 266788889888887754
No 330
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.78 E-value=3.2e-09 Score=73.81 Aligned_cols=56 Identities=16% Similarity=0.242 Sum_probs=43.0
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC-ccc--cccCCcccccEEEE
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT-VNE--LEHTKITSFPTLKL 250 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~-~~~--~~~~~i~~~Ptl~~ 250 (305)
.++.||++||++|+.+.+.+++++..+. ..+.+..+|.+ .+. ..++++.++|++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSK--YTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTT--EEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcC--CeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 3678999999999999999999876652 25666666653 122 27899999999987
No 331
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.78 E-value=1.7e-08 Score=82.53 Aligned_cols=90 Identities=13% Similarity=0.189 Sum_probs=72.3
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc--------------------------cc-ccC
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN--------------------------EL-EHT 240 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~--------------------------~~-~~~ 240 (305)
.+++++|.|| ++||++|+...+.+.++.+.++. .++.++.|+.+.. .. +.|
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 122 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED-RDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAA 122 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHH
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHh
Confidence 3689999999 99999999999999999999964 3677777776531 11 567
Q ss_pred Ccc-----cccEEEEEeCCCceEEeeeCCC----CHHHHHHHHHhcCC
Q psy7938 241 KIT-----SFPTLKLYAKDDNRVIDYNGER----VLEALSNFVESGGK 279 (305)
Q Consensus 241 ~i~-----~~Ptl~~f~~g~~~~~~~~g~~----~~~~l~~fi~~~~~ 279 (305)
++. ++|+++++.++++....+.|.. +.+.|.+.|++...
T Consensus 123 ~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 123 GVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp TCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred CCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 888 9999999988777666777754 78999999988654
No 332
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.77 E-value=2.1e-09 Score=89.69 Aligned_cols=120 Identities=13% Similarity=0.199 Sum_probs=79.8
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+...+...+.+. ++ .+...+|+.||++||++|+...|.+.++..
T Consensus 35 G~~aP~f~l~~~~G~~v~l~--~~----~gk~~vll~F~a~~C~~C~~~~~~l~~l~~---------------------- 86 (218)
T 3u5r_E 35 GTRAADFVLPDAGGNLFTLA--EF----KDSPALLVAFISNRCPFVVLIREALAKFAG---------------------- 86 (218)
T ss_dssp TCBCCCCCEECTTCCEECGG--GG----TTCSEEEEEECCSSCHHHHTTHHHHHHHHH----------------------
T ss_pred CCcCCCcEeECCCCCEEeHH--Hh----CCCCeEEEEEECCCCccHHHHHHHHHHHHH----------------------
Confidence 44567777766665555442 11 111237889999999999887777666632
Q ss_pred HHhhcCce-EEEEEEeCCch---------------------------hHHHHHHHcCCCCCCCCeEEEEecCcCceeccC
Q psy7938 83 EFLAGNLK-VLFVTINTDEE---------------------------DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKP 134 (305)
Q Consensus 83 ~~~~~~~~-v~~~~vd~~~~---------------------------~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~ 134 (305)
+++++ +.|+.|+++.. ....+++.|||. ++|++++++..+.+ .|.+
T Consensus 87 ---~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~--~~P~~~liD~~G~i-~~~g 160 (218)
T 3u5r_E 87 ---DYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAA--CTPDFFLYDRERRL-VYHG 160 (218)
T ss_dssp ---HHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCC--EESEEEEECTTCBE-EEEE
T ss_pred ---HHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCC--CCCeEEEECCCCcE-EEec
Confidence 22232 77777777410 345789999998 99999999765553 3321
Q ss_pred --------CCCCCCHHHHHHHHHHHHcCcc
Q psy7938 135 --------ATPEISVDTVRSFVTEFLAGNL 156 (305)
Q Consensus 135 --------~~~~~~~~~l~~fv~~~~~~~~ 156 (305)
..+..+.++|++.++..+.++.
T Consensus 161 ~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~ 190 (218)
T 3u5r_E 161 QFDDARPGNGKDVTGADLRAAVDAVLKGKD 190 (218)
T ss_dssp CSSSCCTTSCCCCCCHHHHHHHHHHHTTCC
T ss_pred cccccccccccccCHHHHHHHHHHHHcCCC
Confidence 1234567899999999987753
No 333
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.77 E-value=1.6e-08 Score=82.12 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=70.1
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc--------------------------cc-ccC
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN--------------------------EL-EHT 240 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~--------------------------~~-~~~ 240 (305)
.++.++|.|| ++||++|....+.+.++++.++. .++.++.|+.+.. .. +.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK-LGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH-TTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH-cCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHh
Confidence 3689999999 99999999999999999999964 2577777776531 11 568
Q ss_pred Ccc------cccEEEEEeCCCceEEeeeCCC----CHHHHHHHHHhcC
Q psy7938 241 KIT------SFPTLKLYAKDDNRVIDYNGER----VLEALSNFVESGG 278 (305)
Q Consensus 241 ~i~------~~Ptl~~f~~g~~~~~~~~g~~----~~~~l~~fi~~~~ 278 (305)
++. ++|+++++++++.....+.|.. +.+.|.+.|++..
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 888 8999999988777666777753 6778888877654
No 334
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.77 E-value=7.4e-10 Score=90.56 Aligned_cols=121 Identities=15% Similarity=0.309 Sum_probs=75.9
Q ss_pred CCCCCeEEEE-eeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLI-RLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~-~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
+...|.+.+. ..+...+.+. + ..+...+|+.||++||++|+...|.+.++...+.
T Consensus 21 g~~~p~f~l~~~~~G~~~~l~--~----~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~------------------ 76 (196)
T 2ywi_A 21 GKQAPPFALTNVIDGNVVRLE--D----VKSDAATVIMFICNHCPFVKHVQHELVRLANDYM------------------ 76 (196)
T ss_dssp TCBCCCCEEEETTTCCEEEHH--H----HCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHG------------------
T ss_pred CCcCCceeeeecCCCCEEeHH--H----hCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHH------------------
Confidence 3446666666 5555544441 1 1111237889999999999877666655532221
Q ss_pred HHHhhcCceEEEEEEeCCc---------------------------hhHHHHHHHcCCCCCCCCeEEEEecCcCc-eecc
Q psy7938 82 TEFLAGNLKVLFVTINTDE---------------------------EDHQKILEFFGMSKDEVPSLRLIRLEEDM-AKYK 133 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~---------------------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~-~~~~ 133 (305)
. ..+.|+.|+++. .....+++.|||. ++|++++++..+.+ ..+.
T Consensus 77 ----~--~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~~ 148 (196)
T 2ywi_A 77 ----P--KGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAA--CTPDFYIFDRDLKCVYRGQ 148 (196)
T ss_dssp ----G--GTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCC--EESEEEEEETTCBEEEEEC
T ss_pred ----h--CCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCC--CCCeEEEEcCCCeEEEccc
Confidence 1 126666666531 1335789999998 99999999865442 2211
Q ss_pred C------CCCCCCHHHHHHHHHHHHcCc
Q psy7938 134 P------ATPEISVDTVRSFVTEFLAGN 155 (305)
Q Consensus 134 ~------~~~~~~~~~l~~fv~~~~~~~ 155 (305)
. ..|..+.++|.+.+.+.+.++
T Consensus 149 ~~~~~~~~~g~~~~~~l~~~i~~ll~~~ 176 (196)
T 2ywi_A 149 LDDSRPNNGIPVTGESIRAALDALLEGR 176 (196)
T ss_dssp SSSCCTTTCCCCCCHHHHHHHHHHHHTC
T ss_pred cCcccccccCccCHHHHHHHHHHHHcCC
Confidence 1 125668899999999998764
No 335
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=7.8e-10 Score=87.28 Aligned_cols=118 Identities=11% Similarity=0.104 Sum_probs=68.9
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeee-ecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIH-LEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
+...|.+.+...+...+.+. ++ .-+.+++.||++||++|+...|.+.+ +...++.
T Consensus 10 g~~~p~f~l~~~~g~~~~l~--~~-----~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~----------------- 65 (159)
T 2ls5_A 10 GEMAPDFTITLTDGKQVTLS--SL-----RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKD----------------- 65 (159)
Confidence 44567777776655555442 11 23678999999999999988887776 5333320
Q ss_pred HHHhhcCceEEEEEEeCCch--------------------hHHHHHHHcCCCCCCCCeEEEEecCcCc-eeccCCCCCCC
Q psy7938 82 TEFLAGNLKVLFVTINTDEE--------------------DHQKILEFFGMSKDEVPSLRLIRLEEDM-AKYKPATPEIS 140 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~~--------------------~~~~l~~~~~I~~~~~Ptl~~~~~~~~~-~~~~~~~~~~~ 140 (305)
...+.++.|+++.. ....+++.||+...++|++++++..+.+ ..+ ...+
T Consensus 66 ------~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~----~g~~ 135 (159)
T 2ls5_A 66 ------NADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKLT----RLYN 135 (159)
Confidence 12233444433311 2234566677533379999999654332 222 1245
Q ss_pred HHHHHHHHHHHHcC
Q psy7938 141 VDTVRSFVTEFLAG 154 (305)
Q Consensus 141 ~~~l~~fv~~~~~~ 154 (305)
.+++.+++......
T Consensus 136 ~~~l~~~l~~l~~~ 149 (159)
T 2ls5_A 136 EEEFASLVQQINEM 149 (159)
Confidence 66777777766443
No 336
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.76 E-value=1.4e-08 Score=83.27 Aligned_cols=89 Identities=10% Similarity=0.130 Sum_probs=70.5
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------------cc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------------EL- 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------------~~- 237 (305)
.++.++|.|| ++||++|+...|.+.++.+.++. .++.++.|+.+.. ..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 110 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE-KGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSIS 110 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHH
Confidence 4689999999 99999999999999999999864 3577777776531 11
Q ss_pred ccCCcc-----cccEEEEEeCCCceEEeeeCCC----CHHHHHHHHHhcC
Q psy7938 238 EHTKIT-----SFPTLKLYAKDDNRVIDYNGER----VLEALSNFVESGG 278 (305)
Q Consensus 238 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~g~~----~~~~l~~fi~~~~ 278 (305)
+.|++. ++|++++++++++....+.|.. +.+.|.+.|++..
T Consensus 111 ~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 111 RDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 568888 9999999998877666677754 6788888887653
No 337
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.76 E-value=2.6e-08 Score=80.54 Aligned_cols=87 Identities=16% Similarity=0.087 Sum_probs=67.1
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc---------ccc----cc----------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV---------NEL----EH---------------- 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~---------~~~----~~---------------- 239 (305)
.++.++|.||++||++|+...|.+.++.+.+++ .++.++.|+++. ... ++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 124 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc-CCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCc
Confidence 478999999999999999999999999999975 358888887642 000 01
Q ss_pred -----C----------C-----cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 240 -----T----------K-----ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 240 -----~----------~-----i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
+ + |..+|+++++.++++...++.|..+.+.|.+.|++
T Consensus 125 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 125 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp TSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred chhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 1 2 33469999998887767788998888888877764
No 338
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.76 E-value=3.5e-08 Score=77.71 Aligned_cols=86 Identities=10% Similarity=0.123 Sum_probs=66.9
Q ss_pred CC-cEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-----------------------cc-c-ccCCc
Q psy7938 190 SK-HVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-----------------------NE-L-EHTKI 242 (305)
Q Consensus 190 ~~-~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-----------------------~~-~-~~~~i 242 (305)
++ +++|.|| ++||++|+...+.+.++++.++. .++.++.|+.+. +. . +.|++
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v 113 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN-DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGV 113 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS-SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTC
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCC
Confidence 55 8999998 99999999999999999999964 367777777653 11 2 67888
Q ss_pred c----ccc--EEEEEeCCCceEEeeeCCC----CHHHHHHHHHh
Q psy7938 243 T----SFP--TLKLYAKDDNRVIDYNGER----VLEALSNFVES 276 (305)
Q Consensus 243 ~----~~P--tl~~f~~g~~~~~~~~g~~----~~~~l~~fi~~ 276 (305)
. ++| +++++.+++.....+.|.. ..+.+.+.|.+
T Consensus 114 ~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 114 FNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp EETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 8 999 8888888777677777754 45677776664
No 339
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.75 E-value=4.1e-09 Score=89.25 Aligned_cols=50 Identities=16% Similarity=0.339 Sum_probs=35.3
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc----c-ccCCcccccEEEE
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE----L-EHTKITSFPTLKL 250 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~----~-~~~~i~~~Ptl~~ 250 (305)
.++.|+.+||++|++....+++.. +.+..+|++.+. . +.++..++|++++
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~~--------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDKG--------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHHT--------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC--------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 467789999999999998888652 233345554432 2 4578889999864
No 340
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.75 E-value=5.1e-10 Score=87.80 Aligned_cols=108 Identities=17% Similarity=0.179 Sum_probs=61.0
Q ss_pred HHHHhhhhhcCcccccccccceeeeeccccccc--CCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKY--KPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF 110 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~ 110 (305)
.+.+++.||++||++|+.+.|.+.++... ..+ ..-+...+.+.+..++.+.. +.+..+.++ ....+++.|
T Consensus 42 gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~-----~~~~~~~~d--~~~~~~~~~ 113 (156)
T 1kng_A 42 GKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYG-----NPFGRVGVD--ANGRASIEW 113 (156)
T ss_dssp TSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHC-----CCCSEEEEE--TTSHHHHHT
T ss_pred CCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcC-----CCCceeeeC--chhHHHHhc
Confidence 45688899999999998877766665222 000 00000001111111111110 111112223 345789999
Q ss_pred CCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 111 GMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 111 ~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
||. ++|++++++.++. ...+ .|..+.+++.+++.+.+.
T Consensus 114 ~v~--~~P~~~~id~~G~i~~~~---~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 114 GVY--GVPETFVVGREGTIVYKL---VGPITPDNLRSVLLPQME 152 (156)
T ss_dssp TCC--SSCEEEEECTTSBEEEEE---ESCCCHHHHHHTHHHHHH
T ss_pred CcC--ccCeEEEEcCCCCEEEEE---eCCCCHHHHHHHHHHHHH
Confidence 998 9998888865443 2334 267788899999888764
No 341
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.74 E-value=3.4e-08 Score=81.77 Aligned_cols=88 Identities=14% Similarity=0.106 Sum_probs=68.1
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----c----c-c----c------cCC--------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----N----E-L----E------HTK-------- 241 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----~----~-~----~------~~~-------- 241 (305)
.+++++|.||++||++|+...|.++++.++++.. ++.++.|+++. . . . + +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~-g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d 124 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPR-GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEK 124 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGG-TEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCC-CeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEE
Confidence 4789999999999999999999999999999753 58888887641 0 0 0 1 222
Q ss_pred ---------------------------------------------cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 242 ---------------------------------------------ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 242 ---------------------------------------------i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
|...|+.+++.++++...++.|..+.+.|.+.|++
T Consensus 125 ~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ 204 (208)
T 2f8a_A 125 CEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 204 (208)
T ss_dssp CCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHH
T ss_pred eecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHH
Confidence 33458899998888877888998888888888775
Q ss_pred c
Q psy7938 277 G 277 (305)
Q Consensus 277 ~ 277 (305)
.
T Consensus 205 l 205 (208)
T 2f8a_A 205 L 205 (208)
T ss_dssp H
T ss_pred H
Confidence 4
No 342
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.73 E-value=4.2e-09 Score=82.68 Aligned_cols=95 Identities=13% Similarity=0.285 Sum_probs=68.8
Q ss_pred hHHHHHhhhhhcCccccccccc-ceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHH
Q psy7938 31 DTVRSFVTEFLAGNLKHSKFKK-NLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEF 109 (305)
Q Consensus 31 ~~~~~~iv~f~a~wc~~c~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~ 109 (305)
+..++++++|+++||.+|+.|. .+|..- . +++.. +..+.++++|.+..+...++++
T Consensus 40 ~~~K~vlvd~~a~wC~~C~~me~~vf~d~-----------------~----V~~~l--~~~fv~v~~d~~~~~~~~l~~~ 96 (153)
T 2dlx_A 40 MQNKWLMINIQNVQDFACQCLNRDVWSNE-----------------A----VKNII--REHFIFWQVYHDSEEGQRYIQF 96 (153)
T ss_dssp HHTCEEEEEEECSCTTTHHHHHHHTTTCH-----------------H----HHHHH--HHTEEEEEEESSSHHHHHHHHH
T ss_pred HcCCeEEEEEECCCCHhHHHHHHHhcCCH-----------------H----HHHHH--HcCeEEEEEecCCHhHHHHHHH
Confidence 3356789999999999998773 122211 0 11111 1357789999987788889999
Q ss_pred cCCCCCCCCeEEEEecC-c-CceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 110 FGMSKDEVPSLRLIRLE-E-DMAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~-~-~~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
|++. ++|++++++.. + .+..+ .| .+.+++.+++.+++..
T Consensus 97 y~v~--~~P~~~fld~~~G~~l~~~---~g-~~~~~fl~~L~~~l~~ 137 (153)
T 2dlx_A 97 YKLG--DFPYVSILDPRTGQKLVEW---HQ-LDVSSFLDQVTGFLGE 137 (153)
T ss_dssp HTCC--SSSEEEEECTTTCCCCEEE---SS-CCHHHHHHHHHHHHHH
T ss_pred cCCC--CCCEEEEEeCCCCcEeeec---CC-CCHHHHHHHHHHHHHh
Confidence 9998 99999999874 3 44444 24 8999999999998754
No 343
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.72 E-value=1.3e-09 Score=86.28 Aligned_cols=109 Identities=16% Similarity=0.089 Sum_probs=67.5
Q ss_pred HHHHhhhhhcCcccccccccceeeeeccccccc--------CCC-CCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhH
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKY--------KPA-SPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDH 103 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~ 103 (305)
-+.+|+.||++||++|+.+.|.+.++...++.- .+. ....+.+.+..+. .. ..+.+..++++ ..
T Consensus 38 gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~d--~~ 110 (164)
T 2h30_A 38 DKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWY---AG--LNYPKLPVVTD--NG 110 (164)
T ss_dssp TSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHH---TT--SCCTTSCEEEC--TT
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHH---Hh--CCCCcceEEEc--Cc
Confidence 357899999999999998888777665443210 000 0001111111111 11 12222345556 55
Q ss_pred HHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 104 QKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 104 ~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
..+++.|||. ++|++++++..+. ...+ .|..+.++|.+++.+.+.
T Consensus 111 ~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 111 GTIAQNLNIS--VYPSWALIGKDGDVQRIV---KGSINEAQALALIRNPNA 156 (164)
T ss_dssp CHHHHHTTCC--SSSEEEEECTTSCEEEEE---ESCCCHHHHHHHHHCTTC
T ss_pred hHHHHHcCCC--ccceEEEECCCCcEEEEE---cCCCCHHHHHHHHHHHHH
Confidence 7899999998 9999999965443 3334 267889999999988754
No 344
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.70 E-value=1.4e-09 Score=84.28 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=49.7
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch------------
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE------------ 101 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~------------ 101 (305)
+.+++.||++||++|+...|.+.++...+ .. ...+.++.|+++..
T Consensus 29 k~vll~F~a~wC~~C~~~~~~l~~l~~~~----------------------~~-~~~~~vv~i~~d~~~~~~~~~~~~~~ 85 (144)
T 1o73_A 29 KTVFLYFSASWCPPCRGFTPVLAEFYEKH----------------------HV-AKNFEVVLISWDENESDFHDYYGKMP 85 (144)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHHH----------------------TT-TTTEEEEEEECCSSHHHHHHHHTTCS
T ss_pred CEEEEEEECcCCHHHHHHHHHHHHHHHHh----------------------cc-CCCEEEEEEeCCCCHHHHHHHHHhCC
Confidence 56888999999999998877766652222 10 14577888877742
Q ss_pred ----------hHHHHHHHcCCCCCCCCeEEEEe
Q psy7938 102 ----------DHQKILEFFGMSKDEVPSLRLIR 124 (305)
Q Consensus 102 ----------~~~~l~~~~~I~~~~~Ptl~~~~ 124 (305)
....+++.|||. ++|++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~--~~Pt~~lid 116 (144)
T 1o73_A 86 WLALPFDQRSTVSELGKTFGVE--SIPTLITIN 116 (144)
T ss_dssp SEECCTTCHHHHHHHHHHHTCC--SSSEEEEEE
T ss_pred ceEeeccchhHHHHHHHHcCCC--CCCEEEEEE
Confidence 256799999998 999999999
No 345
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.68 E-value=6.1e-08 Score=78.11 Aligned_cols=87 Identities=16% Similarity=0.145 Sum_probs=63.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc-------c--cc----cc-CCc------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV-------N--EL----EH-TKI------------ 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~-------~--~~----~~-~~i------------ 242 (305)
.++.++|.||++||++|+...|.+.++.+.+++ .++.++.|.++. . .. ++ +++
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~-~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~ 115 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP-SHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILG 115 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT-TSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSS
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc-CCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccC
Confidence 478999999999999999999999999999975 358888886543 1 00 12 111
Q ss_pred --------------ccccE----EEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 243 --------------TSFPT----LKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 243 --------------~~~Pt----l~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
.++|+ .+++.++++....+.|..+.+.|.+.|.+
T Consensus 116 ~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 167 (180)
T 3kij_A 116 SEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAA 167 (180)
T ss_dssp TTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHH
T ss_pred ccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHH
Confidence 12687 78888777767788887776665555543
No 346
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.68 E-value=7.8e-08 Score=78.69 Aligned_cols=88 Identities=14% Similarity=0.113 Sum_probs=69.4
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------------cc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------------EL- 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------------~~- 237 (305)
.++.++|.|| ++||++|....+.+.++++.++. .++.++.|+.+.. ..
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 111 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK-LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLS 111 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHH
Confidence 3689999999 99999999999999999999964 3577777776631 11
Q ss_pred ccCCcc------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 238 EHTKIT------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
+.|++. .+|+++++.+++.....+.| .++.+++.+.|++.
T Consensus 112 ~~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 112 EDYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 567787 79999999888776666666 34678888888764
No 347
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.67 E-value=3e-08 Score=69.41 Aligned_cols=72 Identities=17% Similarity=0.356 Sum_probs=54.5
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----c-ccCC--cccccEEEEEeCCCceEEeeeCCC
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----L-EHTK--ITSFPTLKLYAKDDNRVIDYNGER 265 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----~-~~~~--i~~~Ptl~~f~~g~~~~~~~~g~~ 265 (305)
++.|+++||++|+.+.+.+++++..+. ++.+..+|.+.+. . +.++ +.++|+++ .+|.. . .|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~---~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g~~-i---~~-- 71 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD---DFQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQQH-I---GG-- 71 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS---SCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETTEE-E---ES--
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC---CceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECCEE-E---EC--
Confidence 678999999999999999999998873 5788888887643 2 5677 99999983 35522 2 23
Q ss_pred CHHHHHHHHHhc
Q psy7938 266 VLEALSNFVESG 277 (305)
Q Consensus 266 ~~~~l~~fi~~~ 277 (305)
.+.|.++++++
T Consensus 72 -~~~l~~~~~~~ 82 (85)
T 1ego_A 72 -YTDFAAWVKEN 82 (85)
T ss_dssp -SHHHHHHHHHH
T ss_pred -HHHHHHHHHHh
Confidence 25788888764
No 348
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.67 E-value=1.4e-07 Score=75.18 Aligned_cols=91 Identities=19% Similarity=0.327 Sum_probs=69.7
Q ss_pred CCCcEEEEEECCCCh-hhhhHHHHHHHHHHHhCCCC-ceEEEEEeCCcc----c-----ccc------------------
Q psy7938 189 KSKHVLVEFYAPWCG-HCKQLAPIYDKLGEKFADRD-DITIAKIDATVN----E-----LEH------------------ 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~-~C~~~~~~~~~la~~~~~~~-~v~~~~id~~~~----~-----~~~------------------ 239 (305)
.++.++|.||++||+ +|....+.+.++.+.++..+ ++.++.|+.+.. . .++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 478999999999999 99999999999999986533 477777776521 0 011
Q ss_pred -------------------CCcccccEEEEEeCCCceEEeeeCCC--CHHHHHHHHHhcCC
Q psy7938 240 -------------------TKITSFPTLKLYAKDDNRVIDYNGER--VLEALSNFVESGGK 279 (305)
Q Consensus 240 -------------------~~i~~~Ptl~~f~~g~~~~~~~~g~~--~~~~l~~fi~~~~~ 279 (305)
+++...|+++++.++++....+.|.. +.+.|.+.|++...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 172 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAST 172 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 23567899999998888677788865 57899999887653
No 349
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.66 E-value=1.9e-09 Score=83.43 Aligned_cols=108 Identities=13% Similarity=0.154 Sum_probs=65.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
++..|.+.+ ..+...+.+. ++. -+.+++.||++||++|+...|.+.++...++.
T Consensus 10 G~~~P~f~l-~~~g~~~~l~--~~~-----gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~------------------ 63 (143)
T 4fo5_A 10 GDLAPRIEF-LGNDAKASFH--NQL-----GRYTLLNFWAAYDAESRARNVQLANEVNKFGP------------------ 63 (143)
T ss_dssp TSBCCCCCC------CCCSC--CSS-----CCEEEEEEECTTCHHHHHHHHHHHHHHTTSCT------------------
T ss_pred cccCCceEE-cCCCCEEEHH--HhC-----CCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCc------------------
Confidence 456788887 6555544442 222 24678899999999998777766666333211
Q ss_pred HHhhcCceEEEEEEeCCch------------------------hHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCC
Q psy7938 83 EFLAGNLKVLFVTINTDEE------------------------DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPE 138 (305)
Q Consensus 83 ~~~~~~~~v~~~~vd~~~~------------------------~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~ 138 (305)
..+.|+.|+.+.. ....+++.|||. ++|+.++++..+.+... .
T Consensus 64 ------~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~--~~P~~~lid~~G~i~~~-----~ 130 (143)
T 4fo5_A 64 ------DKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLR--KGFKNFLINDEGVIIAA-----N 130 (143)
T ss_dssp ------TTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGG--GCCCEEEECTTSBEEEE-----S
T ss_pred ------CCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCC--CCCcEEEECCCCEEEEc-----c
Confidence 2355665555521 124688999998 99999999865442222 2
Q ss_pred CCHHHHHHHHH
Q psy7938 139 ISVDTVRSFVT 149 (305)
Q Consensus 139 ~~~~~l~~fv~ 149 (305)
.+.+++.+++.
T Consensus 131 ~~~~~l~~~l~ 141 (143)
T 4fo5_A 131 VTPEKLTEILK 141 (143)
T ss_dssp CCHHHHHHHHT
T ss_pred CCHHHHHHHHH
Confidence 35667776654
No 350
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.65 E-value=3e-09 Score=85.67 Aligned_cols=132 Identities=9% Similarity=0.053 Sum_probs=75.6
Q ss_pred CCCCCeEEEEeecc--CceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhH
Q psy7938 3 KDEVPSLRLIRLEE--DMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSF 80 (305)
Q Consensus 3 ~~~~p~i~l~~~~~--~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (305)
+...|.+.+...+. ..+.+. ++. -+.+|+.||++||++|+...|.+.++...--.+..-+...+.+.+..+
T Consensus 33 G~~~P~f~l~~~~g~~~~~~l~--~~~-----gk~vll~F~a~~C~~C~~~~~~l~~l~~~~v~vv~vs~~d~~~~~~~~ 105 (176)
T 3kh7_A 33 GKPFPAFDLPSVQDPARRLTEA--DLK-----GKPALVNVWGTWCPSCRVEHPELTRLAEQGVVIYGINYKDDNAAAIKW 105 (176)
T ss_dssp TSBCCCCEEEBSSCTTSEEEGG--GGC-----SSCEEEEEECTTCHHHHHHHHHHHHHHHTTCEEEEEEESCCHHHHHHH
T ss_pred CCcCCCcEecccCCCCceecHH--HhC-----CCEEEEEEECCcCHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHH
Confidence 56688888888766 444442 221 256788999999999987776666553220000000000111222222
Q ss_pred HHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCCCCeEEEEecCcCc-eeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 81 VTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDEVPSLRLIRLEEDM-AKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 81 ~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~-~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+.+. .-....+..| ....+++.|||. ++|++++++..+.+ ..+ .|..+.+++.+++...+.
T Consensus 106 ~~~~---~~~~~~~~~d----~~~~~~~~~~v~--~~P~~~lid~~G~i~~~~---~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 106 LNEL---HNPYLLSISD----ADGTLGLDLGVY--GAPETYLIDKQGIIRHKI---VGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp HHHT---TCCCSEEEEE----TTCHHHHHHTCC--SSCEEEEECTTCBEEEEE---ESCCCHHHHHHHTHHHHH
T ss_pred HHHc---CCCCceEEEC----CcchHHHHcCCC--CCCeEEEECCCCeEEEEE---cCCCCHHHHHHHHHHHHH
Confidence 2221 1111111223 235789999998 99999988765442 233 266788899988888764
No 351
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.64 E-value=1.3e-08 Score=82.29 Aligned_cols=119 Identities=12% Similarity=0.070 Sum_probs=77.2
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. ++ .-+.+++.||++||++|+...|.+.++.
T Consensus 37 g~~~p~f~l~~~~G~~~~l~--~~-----~gk~vll~F~a~~C~~C~~~~~~l~~l~----------------------- 86 (186)
T 1jfu_A 37 PLKLPDLAFEDADGKPKKLS--DF-----RGKTLLVNLWATWCVPCRKEMPALDELQ----------------------- 86 (186)
T ss_dssp CCBCCCCEEECTTSCEEEGG--GG-----TTSEEEEEEECTTCHHHHHHHHHHHHHH-----------------------
T ss_pred CCcCCCcEeEcCCCCEeeHH--Hc-----CCCEEEEEEEeCCCHhHHHHHHHHHHHH-----------------------
Confidence 44577777777666666552 11 1246788999999999987776665552
Q ss_pred HHhhcC-ceEEEEEEeCCch---hHHHHHHHcCCCC---------------------CCCCeEEEEecCcCc-eeccCCC
Q psy7938 83 EFLAGN-LKVLFVTINTDEE---DHQKILEFFGMSK---------------------DEVPSLRLIRLEEDM-AKYKPAT 136 (305)
Q Consensus 83 ~~~~~~-~~v~~~~vd~~~~---~~~~l~~~~~I~~---------------------~~~Ptl~~~~~~~~~-~~~~~~~ 136 (305)
.+++ ..+.++.|+++.. ....+++++++.. .++|++++++..+.+ ..+.+.
T Consensus 87 --~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~- 163 (186)
T 1jfu_A 87 --GKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGP- 163 (186)
T ss_dssp --HHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESC-
T ss_pred --HHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecC-
Confidence 2222 3577888877732 3356777777730 279999999765442 344322
Q ss_pred CCCCHHHHHHHHHHHHcC
Q psy7938 137 PEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 137 ~~~~~~~l~~fv~~~~~~ 154 (305)
...+.+++.+++...+.+
T Consensus 164 ~~~~~~~l~~~l~~ll~~ 181 (186)
T 1jfu_A 164 AEWASEDALKLIRAATGK 181 (186)
T ss_dssp CCTTSHHHHHHHHHHHC-
T ss_pred CccCHHHHHHHHHHHhcc
Confidence 223478999999998754
No 352
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.62 E-value=5.8e-08 Score=78.65 Aligned_cols=87 Identities=15% Similarity=0.041 Sum_probs=66.1
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----c-----cc----ccC---------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV----N-----EL----EHT--------------- 240 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~----~-----~~----~~~--------------- 240 (305)
.++.++|.||++||++|+...|.+.++.+.+++ .++.++.|+++. . .. +++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 126 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE-CGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGD 126 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG-GTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSST
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc-CCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCCh
Confidence 468999999999999999999999999999975 357888787642 0 00 111
Q ss_pred ----------------C-----cccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHh
Q psy7938 241 ----------------K-----ITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVES 276 (305)
Q Consensus 241 ----------------~-----i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~ 276 (305)
+ ++.+|+.+++.++++...++.|..+.+.|.+.|++
T Consensus 127 ~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 127 DAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp TBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred hhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 2 22358999998888777788898888888777764
No 353
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.61 E-value=8.6e-09 Score=75.00 Aligned_cols=79 Identities=6% Similarity=0.075 Sum_probs=58.4
Q ss_pred HHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC
Q psy7938 35 SFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK 114 (305)
Q Consensus 35 ~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~ 114 (305)
+.|+.|+++||++|+.+.+++.++ ...+.|..+|.++.++.+++++|| .
T Consensus 17 ~~v~~f~~~~C~~C~~~~~~L~~l-----------------------------~~~i~~~~vdi~~~~~~el~~~~g-~- 65 (100)
T 1wjk_A 17 PVLTLFTKAPCPLCDEAKEVLQPY-----------------------------KDRFILQEVDITLPENSTWYERYK-F- 65 (100)
T ss_dssp CEEEEEECSSCHHHHHHHHHTSTT-----------------------------SSSSEEEEEETTSSTTHHHHHHSS-S-
T ss_pred CEEEEEeCCCCcchHHHHHHHHHh-----------------------------hhCCeEEEEECCCcchHHHHHHHC-C-
Confidence 457789999999999888777655 123778999988545688999999 7
Q ss_pred CCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 115 DEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 115 ~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
++|++ |..|+. ... +..+.+.|++++...+
T Consensus 66 -~vP~l--~~~g~~-~~~----~g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 66 -DIPVF--HLNGQF-LMM----HRVNTSKLEKQLRKLS 95 (100)
T ss_dssp -SCSEE--EESSSE-EEE----SSCCHHHHHHHHHSSS
T ss_pred -CCCEE--EECCEE-EEe----cCCCHHHHHHHHHHHH
Confidence 99986 344433 122 4578889999987653
No 354
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.60 E-value=6.4e-09 Score=82.82 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=50.8
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhH----------
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDH---------- 103 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~---------- 103 (305)
+.+|+.|||+||++|+...|.+.++...+ .. ...+.|+.|+++....
T Consensus 49 k~vll~F~a~wC~~C~~~~p~l~~l~~~~----------------------~~-~~~v~vv~v~~d~~~~~~~~~~~~~~ 105 (165)
T 3s9f_A 49 KTVFFYFSASWCPPCRGFTPQLVEFYEKH----------------------HD-SKNFEIILASWDEEEDDFNAYYAKMP 105 (165)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHH----------------------TT-TTTEEEEEEECCCSHHHHHHHHTTCS
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHHh----------------------cc-CCCeEEEEEecCCCHHHHHHHHHhCC
Confidence 56888999999999998877776662222 11 1357777777774322
Q ss_pred ------------HHHHHHcCCCCCCCCeEEEEecC
Q psy7938 104 ------------QKILEFFGMSKDEVPSLRLIRLE 126 (305)
Q Consensus 104 ------------~~l~~~~~I~~~~~Ptl~~~~~~ 126 (305)
..+++.|+|. ++|++++++..
T Consensus 106 ~~~~~~~~~~~~~~l~~~~~v~--~~Pt~~lid~~ 138 (165)
T 3s9f_A 106 WLSIPFANRNIVEALTKKYSVE--SIPTLIGLNAD 138 (165)
T ss_dssp SEECCTTCHHHHHHHHHHTTCC--SSSEEEEEETT
T ss_pred CcccccCchhHHHHHHHHcCCC--CCCEEEEEeCC
Confidence 6899999998 99999999964
No 355
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.56 E-value=1.9e-07 Score=76.77 Aligned_cols=88 Identities=13% Similarity=0.138 Sum_probs=68.4
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------------cc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------------EL- 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------------~~- 237 (305)
.++.++|.|| ++||++|....+.+.++++.++. .++.++.|+.+.. ..
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~-~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~ 113 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD-IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIM 113 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHH
Confidence 3679999999 99999999999999999999964 4677777776531 01
Q ss_pred ccCCcc------cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 238 EHTKIT------SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~------~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
+.|++. ++|+++++.+++.....+.|. .+.+++.+.|++.
T Consensus 114 ~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 457788 999999998887765555553 4568888877754
No 356
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.55 E-value=1.8e-07 Score=76.22 Aligned_cols=88 Identities=14% Similarity=0.204 Sum_probs=67.9
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------------cc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------------EL- 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------------~~- 237 (305)
.++.++|.|| ++||++|....+.+.++++.++. .++.++.|+.+.. ..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 108 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE-RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIA 108 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHH
Confidence 4689999999 99999999999999999999963 3577777766531 11
Q ss_pred ccCCcc-----cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 238 EHTKIT-----SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
+.|++. .+|+++++++++.....+.|. .+.+.+.+.|++.
T Consensus 109 ~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 109 RSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 567888 899999998887766666663 3577788777654
No 357
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.53 E-value=8.3e-09 Score=92.13 Aligned_cols=92 Identities=11% Similarity=0.075 Sum_probs=65.0
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc-------------
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE------------- 100 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~------------- 100 (305)
+.+|+.||++||++|+...|.+.++...++. ..+.|+.|+++.
T Consensus 83 K~vLl~F~atwC~~C~~~~p~L~~l~~~~~~------------------------~~v~vi~Vs~d~~~~~d~~~~~~~~ 138 (352)
T 2hyx_A 83 KVVLIDFWAYSCINCQRAIPHVVGWYQAYKD------------------------SGLAVIGVHTPEYAFEKVPGNVAKG 138 (352)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHGG------------------------GTEEEEEEECCSSGGGGCHHHHHHH
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHhhc------------------------CCeEEEEEECCcccccCCHHHHHHH
Confidence 5688899999999999887777666333311 136666666541
Q ss_pred ------------hhHHHHHHHcCCCCCCCCeEEEEecCcC-ceeccCCCCCCCHHHHHHHHHHHHcC
Q psy7938 101 ------------EDHQKILEFFGMSKDEVPSLRLIRLEED-MAKYKPATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 101 ------------~~~~~l~~~~~I~~~~~Ptl~~~~~~~~-~~~~~~~~~~~~~~~l~~fv~~~~~~ 154 (305)
.....+++.|+|. ++|++++++.... ...+ .|..+.+++.+++.+.+..
T Consensus 139 ~~~~~l~fpv~~D~~~~l~~~ygV~--~~Pt~~lID~~G~Iv~~~---~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 139 AANLGISYPIALDNNYATWTNYRNR--YWPAEYLIDATGTVRHIK---FGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp HHHHTCCSCEEECTTSHHHHHTTCC--EESEEEEECTTSBEEEEE---ESBCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCccEEeCCcHHHHHHcCCC--ccCEEEEEeCCCeEEEEE---cCCCCHHHHHHHHHHHHhh
Confidence 0235789999998 9999999975544 2334 2567889999999988753
No 358
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.53 E-value=2.7e-07 Score=76.96 Aligned_cols=87 Identities=11% Similarity=0.161 Sum_probs=67.7
Q ss_pred CCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------------cc-c
Q psy7938 190 SKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------------EL-E 238 (305)
Q Consensus 190 ~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------------~~-~ 238 (305)
++.++|.|| ++||++|....+.+.++++.++. .++.++.|+.+.. .. +
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD-VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 589999999 99999999999999999999964 3577777766531 11 5
Q ss_pred cCCcc------cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 239 HTKIT------SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 239 ~~~i~------~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
.|++. .+|+++++++++.....+.|. .+.+++.+.|++.
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 67888 999999998877755555553 4668888877754
No 359
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.48 E-value=2.4e-08 Score=79.03 Aligned_cols=117 Identities=14% Similarity=0.161 Sum_probs=72.8
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
++..|.+.+...+...+.+. ++ .+..+.|+.|| ++||++|+...|.+.++...++.
T Consensus 5 G~~~P~f~l~~~~G~~~~l~--~~----~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~----------------- 61 (161)
T 3drn_A 5 GDKAPLFEGIADNGEKISLS--DY----IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD----------------- 61 (161)
T ss_dssp TSBCCCCEEEETTSCEEEGG--GT----TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT-----------------
T ss_pred CCcCCCeEeecCCCCEEEHH--Hh----cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-----------------
Confidence 56789999988877777663 22 22223788999 99999998776666555333211
Q ss_pred HHHhhcCceEEEEEEeCCch-------------------hHHHHHHHcCCCCCC----CCeEEEEecCcCc-eeccCC-C
Q psy7938 82 TEFLAGNLKVLFVTINTDEE-------------------DHQKILEFFGMSKDE----VPSLRLIRLEEDM-AKYKPA-T 136 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~~-------------------~~~~l~~~~~I~~~~----~Ptl~~~~~~~~~-~~~~~~-~ 136 (305)
..+.++.|++|.. ....+++.|||. + +|++++++..+.+ ..+.+. .
T Consensus 62 -------~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~--~~~~~~P~~~lid~~G~i~~~~~g~~~ 132 (161)
T 3drn_A 62 -------YDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAK--GFILPARITFVIDKKGIIRHIYNSQMN 132 (161)
T ss_dssp -------TCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCC--CSSSCCCEEEEECTTSBEEEEEECSSC
T ss_pred -------cCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCC--CcCcccceEEEECCCCEEEEEEecCCC
Confidence 1255555555421 235789999997 7 9999999865442 344321 1
Q ss_pred CCCCHHHHHHHHHHH
Q psy7938 137 PEISVDTVRSFVTEF 151 (305)
Q Consensus 137 ~~~~~~~l~~fv~~~ 151 (305)
.....+++.+.+...
T Consensus 133 ~~~~~~~il~~l~~l 147 (161)
T 3drn_A 133 PANHVNEALKALKQI 147 (161)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHh
Confidence 122344555555554
No 360
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.48 E-value=4.4e-07 Score=75.27 Aligned_cols=88 Identities=14% Similarity=0.181 Sum_probs=67.3
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------------c-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------------L- 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------------~- 237 (305)
.++.++|.|| ++||++|....+.+.+++++++. .++.++.|+.+... .
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 129 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHE-RNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSIS 129 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHH
Confidence 4679999999 99999999999999999999963 35777766654310 1
Q ss_pred ccCCcc-----cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 238 EHTKIT-----SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~-----~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
+.|++. .+|+++++.+++.....+.|. ++.+++.+.|+..
T Consensus 130 ~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 130 KDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 567788 899999999888765555553 4578888877753
No 361
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.48 E-value=2e-07 Score=76.49 Aligned_cols=90 Identities=9% Similarity=-0.023 Sum_probs=61.7
Q ss_pred CCCcEEEEEECCCChh-hhhHHHHHHHHHHHhCC--CCceEEEEEeCCcc-----------------------------c
Q psy7938 189 KSKHVLVEFYAPWCGH-CKQLAPIYDKLGEKFAD--RDDITIAKIDATVN-----------------------------E 236 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~-C~~~~~~~~~la~~~~~--~~~v~~~~id~~~~-----------------------------~ 236 (305)
.++.++|.||++||++ |....|.+.++...+.. ..++.++.|+.+.. .
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 4789999999999997 99999999998877753 13566666665520 0
Q ss_pred c-ccCCcc-cc---------------cEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 237 L-EHTKIT-SF---------------PTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 237 ~-~~~~i~-~~---------------Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
. +.|+|. +. |+++++.++++....+.|..+.+.+.+.|.+..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l 178 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHV 178 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 1 345555 33 378888888876777888777666666655543
No 362
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.48 E-value=8.1e-07 Score=67.03 Aligned_cols=96 Identities=20% Similarity=0.241 Sum_probs=76.4
Q ss_pred cEEec-ccChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccccccCCcccccEEEEEe
Q psy7938 174 VKVLV-ASNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNELEHTKITSFPTLKLYA 252 (305)
Q Consensus 174 v~~l~-~~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~~~~~i~~~Ptl~~f~ 252 (305)
+..|+ ..++.+++ +.+..++|-|+++||+.| .+.|.++|+.+ . ++.|+..+. ..-...++++ .|++++|+
T Consensus 23 ~~~i~s~~e~e~fi-~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~--d~~F~~t~~-~~v~~~~~v~-~~~vvlfk 93 (124)
T 2l4c_A 23 PTWLTDVPAAMEFI-AATEVAVIGFFQDLEIPA---VPILHSMVQKF-P--GVSFGISTD-SEVLTHYNIT-GNTICLFR 93 (124)
T ss_dssp CEECCSHHHHHHHH-HTSSEEEEEECSCTTSTH---HHHHHHHHHHC-T--TSEEEEECC-HHHHHHTTCC-SSCEEEEE
T ss_pred ceEcCCHHHHHHHH-hcCCCEEEEEECCCCChh---HHHHHHHHHhC-C--CceEEEECh-HHHHHHcCCC-CCeEEEEE
Confidence 55564 46788877 457889999999999998 67899999998 3 678887653 3334788888 89999999
Q ss_pred CCCceEEeeeC----CCCHHHHHHHHHhcC
Q psy7938 253 KDDNRVIDYNG----ERVLEALSNFVESGG 278 (305)
Q Consensus 253 ~g~~~~~~~~g----~~~~~~l~~fi~~~~ 278 (305)
+.......|.| ..+.+.|.+||..+.
T Consensus 94 kfde~~~~~~g~~~~~~~~~~L~~FI~~n~ 123 (124)
T 2l4c_A 94 LVDNEQLNLEDEDIESIDATKLSRFIEINS 123 (124)
T ss_dssp TTTTEEEEECHHHHTTCCHHHHHHHHHHHC
T ss_pred cCCCCceeecCcccCCCCHHHHHHHHHHhc
Confidence 97655788986 689999999999864
No 363
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.48 E-value=1e-06 Score=69.82 Aligned_cols=85 Identities=13% Similarity=0.156 Sum_probs=63.1
Q ss_pred CCCcEEEEEECCC-ChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------------------------c-ccCCc
Q psy7938 189 KSKHVLVEFYAPW-CGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------------------------L-EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~~~-C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------------------------~-~~~~i 242 (305)
.+++++|.||++| |++|+...|.+.++.+.+ .++.++.|+.+... . +.|++
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~---~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 119 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL---GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGV 119 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH---SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTC
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc---CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCC
Confidence 4679999999999 999999999999999999 35666666554311 1 34566
Q ss_pred cc------ccEEEEEeCCCceEEeeeCC-----CCHHHHHHHHHh
Q psy7938 243 TS------FPTLKLYAKDDNRVIDYNGE-----RVLEALSNFVES 276 (305)
Q Consensus 243 ~~------~Ptl~~f~~g~~~~~~~~g~-----~~~~~l~~fi~~ 276 (305)
.. .|+++++.++++....+.|. .+.+.+.+.|++
T Consensus 120 ~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 120 YIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp BBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred ccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 65 49999999888866667652 245778877765
No 364
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.46 E-value=2.5e-07 Score=74.04 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=60.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC-----------------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT----------------------------------- 233 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~----------------------------------- 233 (305)
..+.+++.|+++||++|+.+.|.+.++.+.+.+ -++.+..+...
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 456899999999999999999999999988742 23444443221
Q ss_pred --------------------------------cc--ccccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 234 --------------------------------VN--ELEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 234 --------------------------------~~--~~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
.+ ....++|+++||+++ +| ..+.|..+.+.|.+.|.+.
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g----~~~~G~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--ED----ALVPGFVEQSQLQDAVDRA 171 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TT----EEECSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CC----EEeeCCCCHHHHHHHHHHH
Confidence 00 115678999999998 44 2567999999999998764
No 365
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.46 E-value=6.8e-07 Score=74.60 Aligned_cols=87 Identities=11% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCCcEEEEEEC-CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------------c-
Q psy7938 189 KSKHVLVEFYA-PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------------L- 237 (305)
Q Consensus 189 ~~~~~lv~f~~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------------~- 237 (305)
.+++++|.||+ +||++|....|.+.++.+.++. .++.++.|+.+... .
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~ 146 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS-RNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEIS 146 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHH
Confidence 47899999996 9999999999999999999974 35777777766421 1
Q ss_pred ccCCcc------cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHh
Q psy7938 238 EHTKIT------SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVES 276 (305)
Q Consensus 238 ~~~~i~------~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~ 276 (305)
+.|++. .+|+++++++++.....+.|. ...+++.+.|+.
T Consensus 147 ~~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 147 KAYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HHTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 457787 899999999888766666563 346777777765
No 366
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.46 E-value=4.9e-08 Score=77.50 Aligned_cols=116 Identities=11% Similarity=0.151 Sum_probs=71.8
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVT 82 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (305)
+...|.+.+...+...+.+. ++ .-+.+|+.||++||++|+...|.+.++...+
T Consensus 9 g~~~p~f~l~~~~g~~~~l~--~~-----~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~-------------------- 61 (170)
T 2p5q_A 9 PESVHDFTVKDAKENDVDLS--IF-----KGKVLLIVNVASKCGMTNSNYAEMNQLYEKY-------------------- 61 (170)
T ss_dssp -CCGGGCEEEBTTSCEEEGG--GG-----TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH--------------------
T ss_pred CccccceEEEcCCCCEecHH--Hh-----CCCEEEEEEEeccCCccHHHHHHHHHHHHHh--------------------
Confidence 45678888877776666662 21 1257888999999999987766665552222
Q ss_pred HHhhcCc-eEEEEEEeCCc---------hhHHHHHH-Hc-----------------------------CCCCCCCC---e
Q psy7938 83 EFLAGNL-KVLFVTINTDE---------EDHQKILE-FF-----------------------------GMSKDEVP---S 119 (305)
Q Consensus 83 ~~~~~~~-~v~~~~vd~~~---------~~~~~l~~-~~-----------------------------~I~~~~~P---t 119 (305)
++ .+.++.|++|. ....++++ ++ |+...++| +
T Consensus 62 -----~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~ 136 (170)
T 2p5q_A 62 -----KDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFA 136 (170)
T ss_dssp -----GGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTC
T ss_pred -----ccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCccccccc
Confidence 22 37777777641 12233444 43 33002678 8
Q ss_pred EEEEecCcCc-eeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 120 LRLIRLEEDM-AKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 120 l~~~~~~~~~-~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
..+++..+.+ ..+ .|..+.++|.+.+...+.
T Consensus 137 ~~lid~~G~i~~~~---~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 137 KFLVNKDGQVVDRY---YPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp EEEECTTSCEEEEE---CTTSCGGGGHHHHHHHTT
T ss_pred EEEECCCCCEEEee---CCCCCHHHHHHHHHHHhh
Confidence 8888755442 334 256778889999888764
No 367
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.46 E-value=2.2e-07 Score=77.25 Aligned_cols=81 Identities=15% Similarity=0.233 Sum_probs=57.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC------------------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA------------------------------------ 232 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~------------------------------------ 232 (305)
.++.+++.||++||++|+.+.+.++++++. .-.+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999998752 11233222211
Q ss_pred --Cc----cc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 233 --TV----NE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 233 --~~----~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
.. +. ...++|+++||++ +.+|. .+.|..+.+.|.++|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG~----~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAVV-LSNGT----LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEEE-CTTSC----EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEEE-EcCCe----EecCCCCHHHHHHHHHHh
Confidence 10 11 1678999999994 55552 457888999999999865
No 368
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.44 E-value=5.9e-08 Score=76.53 Aligned_cols=116 Identities=9% Similarity=0.063 Sum_probs=72.9
Q ss_pred CCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccc-cccccceeeeecccccccCCCCCcchhhhhhhHHHHH
Q psy7938 6 VPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKH-SKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEF 84 (305)
Q Consensus 6 ~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~-c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (305)
.|.+.+...+...+.+. ++. -+.+++.||++||++ |+...|.+.++...++..
T Consensus 3 ap~f~l~~~~G~~~~l~--~~~-----gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~------------------- 56 (164)
T 2ggt_A 3 GGPFSLTTHTGERKTDK--DYL-----GQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSI------------------- 56 (164)
T ss_dssp CCCCEEEETTSCEEEGG--GGT-----TCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHS-------------------
T ss_pred CCCeEEEeCCCCEEeHH--HcC-----CCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhc-------------------
Confidence 47777777766666652 221 256788999999998 987766666553333210
Q ss_pred hhcCceEEEEEEeCCc--------------------------hhHHHHHHHcCCCCCCCC---------------eEEEE
Q psy7938 85 LAGNLKVLFVTINTDE--------------------------EDHQKILEFFGMSKDEVP---------------SLRLI 123 (305)
Q Consensus 85 ~~~~~~v~~~~vd~~~--------------------------~~~~~l~~~~~I~~~~~P---------------tl~~~ 123 (305)
.-...+.++.|++|. .....+++.|||. ..| ++.++
T Consensus 57 -~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~--~~p~~~~~~~~~~~~~~~~~~li 133 (164)
T 2ggt_A 57 -TTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVY--YSPGPKDEDEDYIVDHTIIMYLI 133 (164)
T ss_dssp -SSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHHHHHTTTCC--EEEEEECTTSCEEEEECCEEEEE
T ss_pred -cCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHhcCeE--EEecCCCCCCCeeEeccceEEEE
Confidence 000134444444431 2345689999997 788 77777
Q ss_pred ecCcCc-eeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 124 RLEEDM-AKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 124 ~~~~~~-~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
+..+.+ ..+ .|..+.++|.+.+...+.
T Consensus 134 d~~G~i~~~~---~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 134 GPDGEFLDYF---GQNKRKGEIAASIATHMR 161 (164)
T ss_dssp CTTSCEEEEE---ETTCCHHHHHHHHHHHHG
T ss_pred CCCCeEEEEe---CCCCCHHHHHHHHHHHHH
Confidence 765443 333 256788999999988764
No 369
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.43 E-value=9.1e-08 Score=75.85 Aligned_cols=49 Identities=2% Similarity=-0.105 Sum_probs=35.0
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
+...|.+.+...+...+.+. ++ . -+.+++.||++||++|+...|.+.++
T Consensus 8 g~~~p~f~l~~~~G~~~~l~--~~----~-gk~vlv~f~a~~C~~C~~~~~~l~~l 56 (169)
T 2v1m_A 8 WNSIYEFTVKDINGVDVSLE--KY----R-GHVCLIVNVACKCGATDKNYRQLQEM 56 (169)
T ss_dssp CCSGGGCEEEBTTSCEEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHH
T ss_pred CcccccceeecCCCCCccHH--Hc----C-CCEEEEEEeeccCCchHHHHHHHHHH
Confidence 45678888887777666662 21 1 25788899999999998766666555
No 370
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.43 E-value=5.5e-09 Score=77.89 Aligned_cols=75 Identities=9% Similarity=0.122 Sum_probs=49.1
Q ss_pred hhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhH-----HHHHHHcCCC
Q psy7938 39 EFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDH-----QKILEFFGMS 113 (305)
Q Consensus 39 ~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~-----~~l~~~~~I~ 113 (305)
.||++||++|+.+.|.+.+++ ..+.++.||.+ .. ..+++.+|+.
T Consensus 24 ~f~a~~C~~C~~~~~~l~~~~-----------------------------~~~~~v~v~~~--~~~~~~~~~l~~~~~v~ 72 (116)
T 2e7p_A 24 VFSKTYCGYCNRVKQLLTQVG-----------------------------ASYKVVELDEL--SDGSQLQSALAHWTGRG 72 (116)
T ss_dssp EEECTTCHHHHHHHHHHHHHT-----------------------------CCCEEEEGGGS--TTHHHHHHHHHHHHSCC
T ss_pred EEECCCChhHHHHHHHHHHcC-----------------------------CCeEEEEccCC--CChHHHHHHHHHHhCCC
Confidence 399999999998887666651 22346666665 33 5689999998
Q ss_pred CCCCCeEEEEecCcCceeccCCCCCC---CHHHHHHHHHHH
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPATPEI---SVDTVRSFVTEF 151 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~~~~~---~~~~l~~fv~~~ 151 (305)
++|++ |..|..+..+. +.. +.+.|.+++.+.
T Consensus 73 --~~Pt~--~~~g~~v~~~~---~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 73 --TVPNV--FIGGKQIGGCD---TVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp --SSCEE--EETTEEEECHH---HHHHHHHTTCHHHHHHHT
T ss_pred --CcCEE--EECCEEECChH---HHHHHHhCChHHHHHHHc
Confidence 99999 44554333331 111 344677777664
No 371
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.43 E-value=8.7e-08 Score=90.31 Aligned_cols=78 Identities=6% Similarity=0.027 Sum_probs=60.8
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE 116 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~ 116 (305)
|+.|+++||++|+.+.|.+.++ +..+ .+|.+.++|.+ ++++++++|||. +
T Consensus 121 i~~f~a~~C~~C~~~~~~l~~~-------------------------a~~~-~~v~~~~vd~~--~~~~~~~~~~i~--s 170 (521)
T 1hyu_A 121 FETYYSLSCHNCPDVVQALNLM-------------------------AVLN-PRIKHTAIDGG--TFQNEITERNVM--G 170 (521)
T ss_dssp EEEEECTTCSSHHHHHHHHHHH-------------------------HHHC-TTEEEEEEETT--TCHHHHHHTTCC--S
T ss_pred eEEEECCCCcCcHHHHHHHHHH-------------------------HhHc-CceEEEEEech--hhHHHHHHhCCC--c
Confidence 4559999999999888887776 2232 37999999999 889999999998 9
Q ss_pred CCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHH
Q psy7938 117 VPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEF 151 (305)
Q Consensus 117 ~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~ 151 (305)
.||+++ +|+.+ . .|..+.++|.+++...
T Consensus 171 vPt~~i--~g~~~--~---~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 171 VPAVFV--NGKEF--G---QGRMTLTEIVAKVDTG 198 (521)
T ss_dssp SSEEEE--TTEEE--E---ESCCCHHHHHHHHCCS
T ss_pred cCEEEE--CCEEE--e---cCCCCHHHHHHHHhhc
Confidence 999977 44331 2 2667888888887553
No 372
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.42 E-value=9.6e-07 Score=69.57 Aligned_cols=87 Identities=9% Similarity=0.094 Sum_probs=64.0
Q ss_pred CCcEEEEEEC-CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------cccCCccc-
Q psy7938 190 SKHVLVEFYA-PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------LEHTKITS- 244 (305)
Q Consensus 190 ~~~~lv~f~~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------~~~~~i~~- 244 (305)
++.++|.||+ +||++|....+.+.++.+.++.. ++.++.|..+... .+.|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKA-GAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHT-TCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHC-CCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 6689999998 99999999999999999999643 4666666655221 14566766
Q ss_pred -----------ccEEEEEeCCCceEEeeeCCC---CHHHHHHHHHhc
Q psy7938 245 -----------FPTLKLYAKDDNRVIDYNGER---VLEALSNFVESG 277 (305)
Q Consensus 245 -----------~Ptl~~f~~g~~~~~~~~g~~---~~~~l~~fi~~~ 277 (305)
+|+++++++++.....+.|.. ..+.+.+.|++.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 899999998888655665533 346677766653
No 373
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.40 E-value=1.1e-07 Score=75.53 Aligned_cols=115 Identities=10% Similarity=0.036 Sum_probs=74.6
Q ss_pred CeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccc-cccccceeeeecccccccCCCCCcchhhhhhhHHHHHh
Q psy7938 7 PSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKH-SKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFL 85 (305)
Q Consensus 7 p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~-c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (305)
|.+.+...+...+.+. ++. -+.+|+.||++||++ |+...|.+.++...++. .
T Consensus 7 p~f~l~~~~G~~~~l~--~~~-----gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~--------------------~ 59 (171)
T 2rli_A 7 GDFHLLDHRGRARCKA--DFR-----GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEA--------------------E 59 (171)
T ss_dssp SCCEEEETTSCEEETT--TTT-----TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHH--------------------S
T ss_pred CCeEEEeCCCCEEeHH--HhC-----CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhh--------------------c
Confidence 7778877776666663 322 246788999999998 98776666665333210 0
Q ss_pred hcCceEEEEEEeCCc--------------------------hhHHHHHHHcCCCCCCCC---------------eEEEEe
Q psy7938 86 AGNLKVLFVTINTDE--------------------------EDHQKILEFFGMSKDEVP---------------SLRLIR 124 (305)
Q Consensus 86 ~~~~~v~~~~vd~~~--------------------------~~~~~l~~~~~I~~~~~P---------------tl~~~~ 124 (305)
.....+.++.|++|. .....+++.|||. ..| ++.+++
T Consensus 60 ~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~--~~p~~~~~~~~~~~~~~~~~~lid 137 (171)
T 2rli_A 60 PGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQASHSYRVY--YNAGPKDEDQDYIVDHSIAIYLLN 137 (171)
T ss_dssp TTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHHHHHHSCCC--CEECCCCSSCCCCEECCCEEEEEC
T ss_pred cCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeE--EEecCCCCCCCeEEeccceEEEEC
Confidence 001346666666552 1234688999997 667 788887
Q ss_pred cCcCc-eeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 125 LEEDM-AKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 125 ~~~~~-~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
..+.+ ..+ .|..+.++|.+.+...+.
T Consensus 138 ~~G~i~~~~---~g~~~~~~l~~~l~~ll~ 164 (171)
T 2rli_A 138 PDGLFTDYY---GRSRSAEQISDSVRRHMA 164 (171)
T ss_dssp TTSCEEEEE---ESSCCHHHHHHHHHHHHH
T ss_pred CCCeEEEEE---CCCCCHHHHHHHHHHHHH
Confidence 65443 334 256788999999988765
No 374
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.40 E-value=2e-06 Score=68.87 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=61.1
Q ss_pred CCCcEEEEEECCC-ChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-----------------------cc-ccCCcc
Q psy7938 189 KSKHVLVEFYAPW-CGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-----------------------EL-EHTKIT 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~-C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-----------------------~~-~~~~i~ 243 (305)
.+++++|.||++| |++|+...|.+.++.+. .++.++.|+.+.. .. +.|++.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~----~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~ 118 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA----SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVT 118 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH----TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCB
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh----cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCc
Confidence 3679999999999 99999999999999988 2466666665411 11 567777
Q ss_pred cc---------cEEEEEeCCCceEEeeeC--C---CCHHHHHHHHHhcC
Q psy7938 244 SF---------PTLKLYAKDDNRVIDYNG--E---RVLEALSNFVESGG 278 (305)
Q Consensus 244 ~~---------Ptl~~f~~g~~~~~~~~g--~---~~~~~l~~fi~~~~ 278 (305)
.. |+++++.++++....+.| . .+.+.+++.+.+.+
T Consensus 119 ~~~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l~~~~ 167 (175)
T 1xvq_A 119 IADGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAALGATS 167 (175)
T ss_dssp BCSSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHHHHTC
T ss_pred ccccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHHHhhc
Confidence 66 899999988876666653 2 24555555555443
No 375
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.39 E-value=5.3e-07 Score=74.67 Aligned_cols=81 Identities=14% Similarity=0.129 Sum_probs=58.3
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC------------------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA------------------------------------ 232 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~------------------------------------ 232 (305)
..+.+++.|+++||++|+.+.+.++++.+. .-.+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 467899999999999999999999997652 11233222221
Q ss_pred --C----ccc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 233 --T----VNE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 233 --~----~~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
. .+. ...++|+++||+++ .+|. .+.|..+.+.|.++|.+.
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~----~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE----LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC----CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE----EecCCCCHHHHHHHHHhc
Confidence 0 001 16789999999998 5553 467988999999999864
No 376
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.37 E-value=1.7e-08 Score=70.11 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=41.2
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE 116 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~ 116 (305)
++-|+++||++|+.+.|.+.++. .++...+.++.||.+ .+..++++++|+. +
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~-------------------------~~~~~~~~~~~v~~~-~~~~~~~~~~gv~--~ 55 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAI-------------------------DPSKYTVEIVHLGTD-KARIAEAEKAGVK--S 55 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHS-------------------------CTTTEEEEEEETTTC-SSTHHHHHHHTCC--E
T ss_pred eEEEeCCCCCchHHHHHHHHHHH-------------------------HhcCCeEEEEEecCC-hhhHHHHHHcCCC--c
Confidence 34699999999998888666551 222234566666653 1356788999998 9
Q ss_pred CCeEEE
Q psy7938 117 VPSLRL 122 (305)
Q Consensus 117 ~Ptl~~ 122 (305)
+|++++
T Consensus 56 vPt~~i 61 (80)
T 2k8s_A 56 VPALVI 61 (80)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 999876
No 377
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.37 E-value=2e-07 Score=64.51 Aligned_cols=70 Identities=9% Similarity=0.124 Sum_probs=49.0
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-----ccCCcccccEEEEEeCCCceEEeeeCCCCHH
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-----EHTKITSFPTLKLYAKDDNRVIDYNGERVLE 268 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-----~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~ 268 (305)
++.|+++||++|+.+.+.++++ ++.+..+|++.+.. .++++.++|+++ .+| . . . |..+.+
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~--------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g-~-~--~-~g~~~~ 67 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR--------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGD-L-S--W-SGFRPD 67 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETT-E-E--E-ESCCHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC--------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECC-E-E--E-ecCCHH
Confidence 6789999999999999988864 24556677775432 358999999983 344 2 2 2 335677
Q ss_pred HHHHHHHhcC
Q psy7938 269 ALSNFVESGG 278 (305)
Q Consensus 269 ~l~~fi~~~~ 278 (305)
.|.++|.+..
T Consensus 68 ~l~~~l~~~~ 77 (81)
T 1h75_A 68 MINRLHPAPH 77 (81)
T ss_dssp HHGGGSCCC-
T ss_pred HHHHHHhccc
Confidence 8888776543
No 378
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.37 E-value=1.8e-07 Score=75.30 Aligned_cols=50 Identities=4% Similarity=-0.083 Sum_probs=37.2
Q ss_pred CCCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 2 SKDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 2 ~~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
++...|.+.+...+...+.+. ++ + -+.+|+.|||+||++|+...|.+.++
T Consensus 14 ~~~~~p~f~l~d~~G~~v~l~--~~----~-Gk~vlv~F~atwC~~C~~~~p~l~~l 63 (180)
T 3kij_A 14 KINSFYAFEVKDAKGRTVSLE--KY----K-GKVSLVVNVASDCQLTDRNYLGLKEL 63 (180)
T ss_dssp CCCCGGGCEEEBTTSCEEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHH
T ss_pred CcCcccceEEecCCCCEecHH--Hc----C-CCEEEEEEEecCCCCcHHHHHHHHHH
Confidence 456688888888877777662 22 1 24788899999999998777766666
No 379
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.34 E-value=1.9e-08 Score=80.06 Aligned_cols=113 Identities=12% Similarity=0.116 Sum_probs=67.8
Q ss_pred CCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccc-cccccceeeeecccccccCCCCCcchhhhhhhHHHH
Q psy7938 5 EVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKH-SKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTE 83 (305)
Q Consensus 5 ~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~-c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (305)
..|.+.+...+. .+.+. ++. -+.+|+.||++||++ |+...|.+.++...++.
T Consensus 15 ~~p~f~l~~~~g-~~~l~--~~~-----gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~------------------- 67 (172)
T 2k6v_A 15 KPVDFALEGPQG-PVRLS--QFQ-----DKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPP------------------- 67 (172)
T ss_dssp EECCCEEECSSS-EEEGG--GST-----TSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCH-------------------
T ss_pred CCCCeEEEcCCC-CCcHH--HhC-----CCEEEEEEECCCCcchhHHHHHHHHHHHHHhhh-------------------
Confidence 356666666655 55442 221 246888999999998 98776666665332211
Q ss_pred HhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCC-------------CCCCCeEEEEe
Q psy7938 84 FLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMS-------------KDEVPSLRLIR 124 (305)
Q Consensus 84 ~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~-------------~~~~Ptl~~~~ 124 (305)
.-...+.|+.|++|.. ....+++.||+. ..++|++++++
T Consensus 68 --~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid 145 (172)
T 2k6v_A 68 --KAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK 145 (172)
T ss_dssp --HHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE
T ss_pred --hccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE
Confidence 0001477777776521 114677777752 02679999999
Q ss_pred cCcC-ceeccCCCCCC--CHHHHHHHHHH
Q psy7938 125 LEED-MAKYKPATPEI--SVDTVRSFVTE 150 (305)
Q Consensus 125 ~~~~-~~~~~~~~~~~--~~~~l~~fv~~ 150 (305)
.+. ...+. |.. +.++|.+.+..
T Consensus 146 -~G~i~~~~~---g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 146 -EGRLVLLYS---PDKAEATDRVVADLQA 170 (172)
T ss_dssp -TTEEEEEEC---HHHHTCHHHHHHHHHH
T ss_pred -CCEEEEEEC---CCCCCCHHHHHHHHHH
Confidence 544 23332 344 77788887765
No 380
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.33 E-value=8.2e-08 Score=78.11 Aligned_cols=92 Identities=12% Similarity=0.138 Sum_probs=57.6
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc---------hhHH
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE---------EDHQ 104 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~---------~~~~ 104 (305)
+.+|+.||++||++|+...|.+.++...++ . ..+.++.|++|. ++..
T Consensus 49 k~vll~F~atwC~~C~~~~~~l~~l~~~~~----------------------~--~~v~vv~vs~d~~~~~~~~~~~~~~ 104 (190)
T 2vup_A 49 SPLLIYNVASKCGYTKGGYETATTLYNKYK----------------------S--QGFTVLAFPCNQFGGQEPGNEEEIK 104 (190)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHHG----------------------G--GTCEEEEEECCCSTTCCCSCHHHHH
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHHHHh----------------------c--CCeEEEEEEcCccCCCCCCCHHHHH
Confidence 578889999999999866666655532221 1 126666666641 1222
Q ss_pred HHH-HH-----------------------------cCCCCCCCC------eEEEEecCcC-ceeccCCCCCCCHHHHHHH
Q psy7938 105 KIL-EF-----------------------------FGMSKDEVP------SLRLIRLEED-MAKYKPATPEISVDTVRSF 147 (305)
Q Consensus 105 ~l~-~~-----------------------------~~I~~~~~P------tl~~~~~~~~-~~~~~~~~~~~~~~~l~~f 147 (305)
+++ ++ +|+. ++| +..+++..+. ...+ .|..+.+++.+.
T Consensus 105 ~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~---~g~~~~~~l~~~ 179 (190)
T 2vup_A 105 EFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--KTKAIKWNFTSFLIDRDGVPVERF---SPGASVKDIEKK 179 (190)
T ss_dssp HHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGG--GCCSCCSTTCEEEECTTSCEEEEE---CTTCCHHHHHHH
T ss_pred HHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcC--CCccccccceEEEECCCCcEEEEE---CCCCCHHHHHHH
Confidence 333 22 3665 678 7777765544 2334 256788999999
Q ss_pred HHHHHcC
Q psy7938 148 VTEFLAG 154 (305)
Q Consensus 148 v~~~~~~ 154 (305)
+.+.+..
T Consensus 180 i~~ll~~ 186 (190)
T 2vup_A 180 LIPLLES 186 (190)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988753
No 381
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.32 E-value=7.9e-07 Score=75.20 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=62.0
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc----------------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV---------------------------------- 234 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~---------------------------------- 234 (305)
..+.+++.|+.+||++|+.+.+.+.++.+. +++.+..+...-
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~----g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l 171 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS----GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKL 171 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT----TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC----CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCC
Confidence 356789999999999999999999887664 245554333210
Q ss_pred ----------------cc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 235 ----------------NE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 235 ----------------~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
+. .+.++|+++||+++.++++. ...+.|..+.+.|.++|.+..
T Consensus 172 ~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 172 NVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred CccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 00 15678999999999875444 457889999999999988654
No 382
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.31 E-value=6.5e-08 Score=78.54 Aligned_cols=48 Identities=6% Similarity=-0.056 Sum_probs=31.2
Q ss_pred CCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeec
Q psy7938 5 EVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLE 59 (305)
Q Consensus 5 ~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~ 59 (305)
..|.+.+...+.+.+.+. ++ .-+.+|+.||++||++|+...|.+.++.
T Consensus 25 ~~p~f~l~d~~G~~~~l~--~~-----~Gk~vlv~F~atwC~~C~~~~p~l~~l~ 72 (187)
T 3dwv_A 25 SIFDFEVLDADHKPYNLV--QH-----KGSPLLIYNVASKCGYTKGGYETATTLY 72 (187)
T ss_dssp SGGGSCCBBTTSCBCCGG--GG-----TTSCEEEEEECCBCSCCTTHHHHHHHHH
T ss_pred ccCCeEEEcCCCCEeeHH--Hh-----CCCEEEEEEecCCCCCcHHHHHHHHHHH
Confidence 356666555555444442 11 1257888999999999987777666663
No 383
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.31 E-value=9.3e-08 Score=66.85 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=52.0
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchh--HHHHHHHcC--C
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEED--HQKILEFFG--M 112 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~--~~~l~~~~~--I 112 (305)
|+.|+++||++|+.+.+.+.+++ ..+. .+.+..+|.+... ..++++.+| +
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~-------------------------~~~~-~i~~~~vdi~~~~~~~~~l~~~~~~~~ 56 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLS-------------------------NERD-DFQYQYVDIRAEGITKEDLQQKAGKPV 56 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHH-------------------------HHHS-SCEEEEECHHHHTCCSHHHHHHTCCCS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHH-------------------------hcCC-CceEEEEecccChHHHHHHHHHhCCCC
Confidence 45699999999998887776652 2222 3888999987211 247899999 7
Q ss_pred CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 113 SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 113 ~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
. ++|++. ..|+ .. +. .++|.+++++.+
T Consensus 57 ~--~vP~i~--~~g~---~i----~~--~~~l~~~~~~~~ 83 (85)
T 1ego_A 57 E--TVPQIF--VDQQ---HI----GG--YTDFAAWVKENL 83 (85)
T ss_dssp C--CSCEEE--ETTE---EE----ES--SHHHHHHHHHHH
T ss_pred c--eeCeEE--ECCE---EE----EC--HHHHHHHHHHhc
Confidence 7 999983 3442 22 11 267888887754
No 384
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.30 E-value=1.3e-06 Score=59.21 Aligned_cols=67 Identities=12% Similarity=0.304 Sum_probs=48.5
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-----ccCCcccccEEEEEeCCCceEEeeeCCCCHH
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-----EHTKITSFPTLKLYAKDDNRVIDYNGERVLE 268 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-----~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~ 268 (305)
++.|+++||++|+.+.+.++++ ++.+..+|.+.+.. +.+++.++|+++. +| . . ..| .+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~--------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g-~-~--~~g-~~~~ 67 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA--------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DG-E-H--WSG-FRPE 67 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TT-E-E--EES-CCHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CC-e-E--EcC-CCHH
Confidence 5779999999999999988865 24455567665432 3789999999984 44 3 2 334 5678
Q ss_pred HHHHHHH
Q psy7938 269 ALSNFVE 275 (305)
Q Consensus 269 ~l~~fi~ 275 (305)
.|.++|+
T Consensus 68 ~l~~~l~ 74 (75)
T 1r7h_A 68 RIKQLQA 74 (75)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 8888873
No 385
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.28 E-value=2.8e-07 Score=76.16 Aligned_cols=49 Identities=10% Similarity=-0.023 Sum_probs=32.9
Q ss_pred CCCCeEEEEeec-cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeeec
Q psy7938 4 DEVPSLRLIRLE-EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHLE 59 (305)
Q Consensus 4 ~~~p~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~~ 59 (305)
...|.+.+...+ ...+.+. ++ + -+.+|+.|||+||++|+...|.+.++.
T Consensus 24 ~~~p~f~l~~~~~G~~v~l~--~~----~-Gk~vlv~FwatwC~~C~~e~p~l~~l~ 73 (208)
T 2f8a_A 24 QSVYAFSARPLAGGEPVSLG--SL----R-GKVLLIENVASLGGTTVRDYTQMNELQ 73 (208)
T ss_dssp CCGGGCEECBTTCSSCEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHHH
T ss_pred CccCceEeeeCCCCCCccHH--Hc----C-CCEEEEEEECCCCccHHHHHHHHHHHH
Confidence 446777766665 5555552 21 1 246889999999999987666666653
No 386
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.27 E-value=4e-06 Score=65.76 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=51.1
Q ss_pred CcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------cccCCccccc
Q psy7938 191 KHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------LEHTKITSFP 246 (305)
Q Consensus 191 ~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------~~~~~i~~~P 246 (305)
+.++|+|| +.||++|....|.+.++.+.++..+ .++.|..+... .+.|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~--~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p 113 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA--AVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTP 113 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC--EEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC--cEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccc
Confidence 36888887 9999999999999999999997644 44444443211 1457788888
Q ss_pred ------EEEEEeCCCceEEeeeCCCC
Q psy7938 247 ------TLKLYAKDDNRVIDYNGERV 266 (305)
Q Consensus 247 ------tl~~f~~g~~~~~~~~g~~~ 266 (305)
+.+++ +++.....+.|...
T Consensus 114 ~~g~~~~~~li-~~G~i~~~~~g~~~ 138 (159)
T 2a4v_A 114 LSGSIRSHFIF-VDGKLKFKRVKISP 138 (159)
T ss_dssp SSCBCCEEEEE-ETTEEEEEEESCCH
T ss_pred cCCccceEEEE-cCCEEEEEEccCCc
Confidence 55556 55554666777543
No 387
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.27 E-value=8.6e-08 Score=76.50 Aligned_cols=90 Identities=10% Similarity=0.113 Sum_probs=55.4
Q ss_pred HHHhhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCC---------chhHH
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTD---------EEDHQ 104 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~---------~~~~~ 104 (305)
+.+|+.|||+||++|+ ..|.+.++...++ . ..+.++.|+++ .++..
T Consensus 33 k~vll~F~a~wC~~C~-~~~~l~~l~~~~~----------------------~--~~v~vv~vs~d~~~~~~~d~~~~~~ 87 (171)
T 3cmi_A 33 KVVLIVNVASKCGFTP-QYKELEALYKRYK----------------------D--EGFTIIGFPCNQFGHQEPGSDEEIA 87 (171)
T ss_dssp CEEEEEEEESSSCCHH-HHHHHHHHHHHHG----------------------G--GTEEEEEEEECSCC-----------
T ss_pred CEEEEEEEecCCCcch-hHHHHHHHHHHhc----------------------c--CCeEEEEEECcccCCCCCCCHHHHH
Confidence 5788899999999998 7666655532221 1 12667777653 01112
Q ss_pred HHH------------------------------HHcCCCCCCCC------eEEEEecCcC-ceeccCCCCCCCHHHHHHH
Q psy7938 105 KIL------------------------------EFFGMSKDEVP------SLRLIRLEED-MAKYKPATPEISVDTVRSF 147 (305)
Q Consensus 105 ~l~------------------------------~~~~I~~~~~P------tl~~~~~~~~-~~~~~~~~~~~~~~~l~~f 147 (305)
+++ ..||+. ++| +..+++..+. ...+ .|..+.++|.+.
T Consensus 88 ~~~~~~~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~--~~P~i~~~~~~~lid~~G~i~~~~---~g~~~~~~l~~~ 162 (171)
T 3cmi_A 88 QFCQLNYGVTFPIMKKIDVNGGNEDPVYKFLKSQKSGML--GLRGIKWNFEKFLVDKKGKVYERY---SSLTKPSSLSET 162 (171)
T ss_dssp -------CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSS--SCCSCCSTTCEEEECSSSCEEEEE---CTTSCGGGGHHH
T ss_pred HHHHhccCCCceEEeeccCCCccchHHHHHHHhccCCcC--CCCcccccceEEEECCCCCEEEEe---CCCCCHHHHHHH
Confidence 222 236776 889 8888875544 2333 256788899999
Q ss_pred HHHHHc
Q psy7938 148 VTEFLA 153 (305)
Q Consensus 148 v~~~~~ 153 (305)
+...+.
T Consensus 163 i~~ll~ 168 (171)
T 3cmi_A 163 IEELLK 168 (171)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 988864
No 388
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.25 E-value=5.2e-06 Score=68.82 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=66.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc--------c-c----c------cCCcc------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN--------E-L----E------HTKIT------ 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~--------~-~----~------~~~i~------ 243 (305)
.++.+||.||++||++|+ ..|.++++.++|+. .++.++.|.++.- . . + +++++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~-~g~~Vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fpll~d 132 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKP-YGLVVLGFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEK 132 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG-GTEEEEEEECCCSTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc-CCeEEEEEEccccCcCCCCCHHHHHHHHHhccchhccCccceeEee
Confidence 478999999999999999 78999999999974 3588887765410 0 0 2 33221
Q ss_pred -------------------------------------------cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcC
Q psy7938 244 -------------------------------------------SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGG 278 (305)
Q Consensus 244 -------------------------------------------~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~ 278 (305)
..|+.++++++++...+|.|..+.+.|.+.|++..
T Consensus 133 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 133 GDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred eccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 01688999888887778889888888988888654
No 389
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.24 E-value=1.2e-07 Score=76.46 Aligned_cols=49 Identities=4% Similarity=0.041 Sum_probs=33.6
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
+...|.+.+...+...+.+. ++ + -+.+|+.||++||++|+...|.+.++
T Consensus 26 g~~~p~f~l~~~~G~~~~l~--~~----~-Gk~vlv~F~atwC~~C~~~~p~l~~l 74 (181)
T 2p31_A 26 EQDFYDFKAVNIRGKLVSLE--KY----R-GSVSLVVNVASECGFTDQHYRALQQL 74 (181)
T ss_dssp -CCGGGCEEEBTTSCEEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHH
T ss_pred CCccCceEeecCCCCEecHH--Hc----C-CCEEEEEEeccCCCCcHHHHHHHHHH
Confidence 34577777777766666552 21 1 24688899999999998776666555
No 390
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.24 E-value=3.1e-07 Score=72.15 Aligned_cols=118 Identities=5% Similarity=-0.000 Sum_probs=70.2
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
++..|.+.+...+...+.+. ++ .+.+.+++.|| ++||++|+...|.+.++...++.
T Consensus 12 G~~~p~f~l~~~~G~~~~l~--~~----~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~----------------- 68 (160)
T 1xvw_A 12 GATAPDFTLRDQNQQLVTLR--GY----RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFEN----------------- 68 (160)
T ss_dssp TSBCCCCEEECTTSCEEEGG--GG----TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSS-----------------
T ss_pred CCCCCCeEeEcCCCCEEeHH--Hh----cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHH-----------------
Confidence 55678888887776666662 11 22226788998 99999998777666665333311
Q ss_pred HHHhhcCceEEEEEEeCCchh---------------------HHHHHHHcCCCC--CCCC--eEEEEecCcC-ceeccCC
Q psy7938 82 TEFLAGNLKVLFVTINTDEED---------------------HQKILEFFGMSK--DEVP--SLRLIRLEED-MAKYKPA 135 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~~~---------------------~~~l~~~~~I~~--~~~P--tl~~~~~~~~-~~~~~~~ 135 (305)
..+.++.|++|..+ ...+++.||+.. .++| ++++++..+. ...+.+.
T Consensus 69 -------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~ 141 (160)
T 1xvw_A 69 -------DDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQ 141 (160)
T ss_dssp -------SSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECC
T ss_pred -------CCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecC
Confidence 23666666655211 467889999841 1678 7777775444 2333322
Q ss_pred -CCCCCHHHHHHHHHH
Q psy7938 136 -TPEISVDTVRSFVTE 150 (305)
Q Consensus 136 -~~~~~~~~l~~fv~~ 150 (305)
......+++.+.+.+
T Consensus 142 ~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 142 PGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTCCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 112345566665544
No 391
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.20 E-value=3.8e-07 Score=73.75 Aligned_cols=49 Identities=6% Similarity=0.042 Sum_probs=34.4
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
+...|.+.+...+...+.+. ++ + -+.+++.||++||++|+...|.+.++
T Consensus 26 g~~~p~f~l~~~~G~~v~l~--~~----~-Gk~vlv~F~atwC~~C~~~~~~l~~l 74 (185)
T 2gs3_A 26 ARSMHEFSAKDIDGHMVNLD--KY----R-GFVCIVTNVASQGGKTEVNYTQLVDL 74 (185)
T ss_dssp CCCGGGCEEEBTTSCEEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHH
T ss_pred CCCcCCceeEcCCCCEeeHH--Hc----C-CCEEEEEEecCCCCchHHHHHHHHHH
Confidence 45678888877776666662 22 1 25678899999999998666665555
No 392
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=1e-06 Score=67.08 Aligned_cols=99 Identities=13% Similarity=0.161 Sum_probs=61.8
Q ss_pred cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc---c-----c-ccCCcccccEEEE
Q psy7938 180 SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN---E-----L-EHTKITSFPTLKL 250 (305)
Q Consensus 180 ~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~---~-----~-~~~~i~~~Ptl~~ 250 (305)
..+.+.+.. . . ++.|+++||++|+.+.+.|.++.. .+.. +|++.. . . ..+++.++|++++
T Consensus 18 ~~~~~~i~~-~-~-vvvf~~~~Cp~C~~~~~~L~~~~i------~~~~--vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 18 NQIQETISD-N-C-VVIFSKTSCSYCTMAKKLFHDMNV------NYKV--VELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp HHHHHHHHH-S-S-EEEEECSSCSHHHHHHHHHHHHTC------CCEE--EETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred HHHHHHHcC-C-c-EEEEEcCCChHHHHHHHHHHHcCC------CcEE--EECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 445555432 2 3 444999999999999999988732 3344 454433 1 2 5678999999843
Q ss_pred EeCCCceEEee---eCCCCHHHHHHHHHhcCCCCCCCCCCCCCcc
Q psy7938 251 YAKDDNRVIDY---NGERVLEALSNFVESGGKEGGLPSGAQQGKF 292 (305)
Q Consensus 251 f~~g~~~~~~~---~g~~~~~~l~~fi~~~~~~~~~~~~~~~~~~ 292 (305)
+|.. +..+ .+......|.++|....-........++++.
T Consensus 87 --~G~~-igg~~~l~~~~~~~~L~~~L~~~g~~~~~~~~~~~~~~ 128 (130)
T 2cq9_A 87 --NGTF-IGGATDTHRLHKEGKLLPLVHQCYLKKSKRKEFQSGPS 128 (130)
T ss_dssp --TTEE-EEEHHHHHHHHHHTSSHHHHHHHSSSCSSCSCCCCCCC
T ss_pred --CCEE-EcChHHHHHHHHcCcHHHHHHHcCcHHHhHHhhccCCC
Confidence 4432 3332 1233455688888887766666666666654
No 393
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.20 E-value=3.2e-06 Score=68.66 Aligned_cols=42 Identities=26% Similarity=0.464 Sum_probs=35.4
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA 232 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~ 232 (305)
+++.+++.|+++||++|+.+.|.+.++.+.+.. ++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA--DVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC--CeEEEEEeh
Confidence 467899999999999999999999999999864 666665544
No 394
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.18 E-value=4.5e-06 Score=69.52 Aligned_cols=88 Identities=13% Similarity=0.129 Sum_probs=64.9
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------------------------------c
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------------------------------L 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------------------------------~ 237 (305)
.++.++|.|| ++||++|....|.+.++.+.++. .++.++.|..+... .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 133 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN-KNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDIS 133 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHH
Confidence 4689999999 99999999999999999999853 35666666554311 0
Q ss_pred ccCCc-----ccccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 238 EHTKI-----TSFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i-----~~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
+.|++ ..+|+++++++++.....+.| ..+.+.+.+.|++.
T Consensus 134 ~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 134 KNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 23556 368999999988876555555 34677888877754
No 395
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.17 E-value=1.8e-05 Score=62.86 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=69.4
Q ss_pred CCcEEEEEECCCCh-hhhhHHHHHHHHHHHhCC-CCceEEEEEeCCccc-------------------------------
Q psy7938 190 SKHVLVEFYAPWCG-HCKQLAPIYDKLGEKFAD-RDDITIAKIDATVNE------------------------------- 236 (305)
Q Consensus 190 ~~~~lv~f~~~~C~-~C~~~~~~~~~la~~~~~-~~~v~~~~id~~~~~------------------------------- 236 (305)
++.++|.||++||+ .|....+.+.++.+.+.. ..++.++.|.++..+
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 78999999999997 699999999999999964 235666665544100
Q ss_pred -c-ccCC---------cccccEEEEEeCCCceEEeeeC-CCCHHHHHHHHHhcCCCCC
Q psy7938 237 -L-EHTK---------ITSFPTLKLYAKDDNRVIDYNG-ERVLEALSNFVESGGKEGG 282 (305)
Q Consensus 237 -~-~~~~---------i~~~Ptl~~f~~g~~~~~~~~g-~~~~~~l~~fi~~~~~~~~ 282 (305)
. +.|+ +...|+++++++++.....|.| ..+.++|.+.|.+......
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~~~~ 165 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARGEGH 165 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTTCSC
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhcccc
Confidence 0 1122 4556899999988886666788 4789999999998876554
No 396
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.17 E-value=7.7e-06 Score=66.11 Aligned_cols=89 Identities=4% Similarity=-0.097 Sum_probs=64.7
Q ss_pred CCCcEEEEEEC-CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc---------------------------ccC
Q psy7938 189 KSKHVLVEFYA-PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL---------------------------EHT 240 (305)
Q Consensus 189 ~~~~~lv~f~~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~---------------------------~~~ 240 (305)
.++.++|.||+ +||++|....|.+.++.+.++. .++.++.|..+.... +.|
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~y 107 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQK-LGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNF 107 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH-TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHh
Confidence 36899999995 9999999999999999998864 356666665543210 234
Q ss_pred Ccc------cccEEEEEeCCCceEEeeeCCC----CHHHHHHHHHhcC
Q psy7938 241 KIT------SFPTLKLYAKDDNRVIDYNGER----VLEALSNFVESGG 278 (305)
Q Consensus 241 ~i~------~~Ptl~~f~~g~~~~~~~~g~~----~~~~l~~fi~~~~ 278 (305)
++. ..|+.+++++++.....+.|.. +.+.+.+.|+...
T Consensus 108 gv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 108 DNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred CCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 554 3699999998888666666643 5778888777543
No 397
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.16 E-value=7.8e-06 Score=67.56 Aligned_cols=88 Identities=10% Similarity=0.080 Sum_probs=65.2
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------------------------------
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------------------------------ 237 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------------------------------ 237 (305)
.++.++|.|| ++||++|....|.+.++.+.++. .++.++.|..+....
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~ 125 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQIS 125 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHH
Confidence 3679999999 99999999999999999999964 356666665543210
Q ss_pred ccCCcc------cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 238 EHTKIT------SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~------~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
+.|++. .+|+++++++++.....+.|. .+.+++.+.|+..
T Consensus 126 ~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 126 KDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 234553 589999999888865555553 4677888877753
No 398
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.16 E-value=1e-05 Score=65.00 Aligned_cols=86 Identities=10% Similarity=0.074 Sum_probs=61.8
Q ss_pred CCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------cccCCccc-
Q psy7938 190 SKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------LEHTKITS- 244 (305)
Q Consensus 190 ~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------~~~~~i~~- 244 (305)
++.++|.|| +.||+.|....+.+.++.+.++. .++.++.|..+... .+.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~-~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~ 129 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQ-INATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKE 129 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHT-TTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCccc
Confidence 668888888 99999999999999999999974 35666666655422 13455542
Q ss_pred -----------ccEEEEEeCCCceEEeeeCC---CCHHHHHHHHHh
Q psy7938 245 -----------FPTLKLYAKDDNRVIDYNGE---RVLEALSNFVES 276 (305)
Q Consensus 245 -----------~Ptl~~f~~g~~~~~~~~g~---~~~~~l~~fi~~ 276 (305)
.|+++++++++.....+.+. ...+.+.+.|++
T Consensus 130 ~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~~ 175 (179)
T 3ixr_A 130 KTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKA 175 (179)
T ss_dssp ECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHHH
T ss_pred ccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 59999999888865566553 345666666654
No 399
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.15 E-value=2.8e-07 Score=74.38 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=34.5
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
+...|.+.+...+...+.+. ++ + -+.+|+.||++||++|+...|.+.++
T Consensus 24 g~~~p~f~l~~~~G~~~~l~--~~----~-gk~vll~F~atwC~~C~~~~~~l~~l 72 (183)
T 2obi_A 24 ARSMHEFSAKDIDGHMVNLD--KY----R-GFVCIVTNVASQCGKTEVNYTQLVDL 72 (183)
T ss_dssp CCSGGGCEEEBTTSCEEEGG--GG----T-TSEEEEEEECSSSTTHHHHHHHHHHH
T ss_pred cCcccceEEEcCCCCEeeHH--Hc----C-CCEEEEEEeCCCCCCcHHHHHHHHHH
Confidence 45578888877776666662 21 1 25688899999999998766665555
No 400
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.15 E-value=1e-05 Score=66.65 Aligned_cols=87 Identities=16% Similarity=0.052 Sum_probs=64.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCc--------c-cc----c------cCCcc------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATV--------N-EL----E------HTKIT------ 243 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~--------~-~~----~------~~~i~------ 243 (305)
.++.+||.||++||++| ...|.+.++.+.++.. ++.++.|.++. . .. + +++++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~-g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d 114 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPF-GLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEK 114 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGG-TEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccC-CEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeE
Confidence 47899999999999999 6789999999999753 57887776531 0 00 2 33211
Q ss_pred -------------------------------------------cccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhc
Q psy7938 244 -------------------------------------------SFPTLKLYAKDDNRVIDYNGERVLEALSNFVESG 277 (305)
Q Consensus 244 -------------------------------------------~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~ 277 (305)
..|+.+++.+++....+|.|..+.+.|.+.|.+.
T Consensus 115 ~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~l 191 (207)
T 2r37_A 115 GDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSY 191 (207)
T ss_dssp CCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHH
T ss_pred eccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 1168899998888777888888888888877654
No 401
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.14 E-value=6.1e-07 Score=73.34 Aligned_cols=120 Identities=9% Similarity=0.044 Sum_probs=75.9
Q ss_pred CCCCCeEEEEee--ccC---ceecCCCCC-CCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhh
Q psy7938 3 KDEVPSLRLIRL--EED---MAKYKPATP-EINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVD 75 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~~---~~~~~~~~~-~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~ 75 (305)
++..|.+.+... +.. .+.+. ++ . -+.+|+.|| ++||++|+...|.+.++...++.
T Consensus 4 G~~~P~f~l~~~~~~G~~~~~v~l~--~~~~-----gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~----------- 65 (198)
T 1zof_A 4 TKLAPDFKAPAVLGNNEVDEHFELS--KNLG-----KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE----------- 65 (198)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEETT--TSCC-----SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH-----------
T ss_pred CCcCCceEeecccCCCcccceEEHH--HHhC-----CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH-----------
Confidence 567899999887 555 55552 32 2 146788999 99999998777766666333311
Q ss_pred hhhhHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCCCC---CCCeEEEEecC
Q psy7938 76 TVRSFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMSKD---EVPSLRLIRLE 126 (305)
Q Consensus 76 ~~~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~~~---~~Ptl~~~~~~ 126 (305)
..+.++.|++|.. ....+++.|||... ++|++++++..
T Consensus 66 -------------~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~ 132 (198)
T 1zof_A 66 -------------KGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKN 132 (198)
T ss_dssp -------------TTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETT
T ss_pred -------------cCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECCC
Confidence 1255555555421 13568889998411 68999999865
Q ss_pred cCc-eeccCC-CCCCCHHHHHHHHHHHHc
Q psy7938 127 EDM-AKYKPA-TPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 127 ~~~-~~~~~~-~~~~~~~~l~~fv~~~~~ 153 (305)
+.+ ..+.+. ....+.+++.+.+.....
T Consensus 133 G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 161 (198)
T 1zof_A 133 MKVRHAVINDLPLGRNADEMLRMVDALLH 161 (198)
T ss_dssp TEEEEEEEESSSCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 442 233211 123467889998888753
No 402
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.13 E-value=1.1e-06 Score=69.78 Aligned_cols=52 Identities=10% Similarity=0.121 Sum_probs=35.3
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCccc-ccccccceeeeeccc
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLK-HSKFKKNLYIHLEED 61 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~-~c~~~~p~~~~~~~~ 61 (305)
+...|.+.+...+...+.+. ++ . -+.+|+.||++||+ +|+...|.+.++...
T Consensus 10 g~~~p~f~l~~~~G~~~~l~--~~----~-gk~vll~f~~~~C~~~C~~~~~~l~~l~~~ 62 (174)
T 1xzo_A 10 NYEVEPFTFQNQDGKNVSLE--SL----K-GEVWLADFIFTNCETICPPMTAHMTDLQKK 62 (174)
T ss_dssp CEECCCCEEECTTSCEEETG--GG----T-TCCEEEEEECSCCSSCCCSHHHHHHHHHHH
T ss_pred ccccCCcEEEcCCCCEEehh--hc----C-CCEEEEEEEcCCCcchhHHHHHHHHHHHHH
Confidence 34578888877776666652 21 1 24678899999999 998776666555333
No 403
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.13 E-value=5.4e-07 Score=65.67 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=49.4
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc------cc-ccCCcccccEEEEEeCCCceEEeeeC--
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN------EL-EHTKITSFPTLKLYAKDDNRVIDYNG-- 263 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~------~~-~~~~i~~~Ptl~~f~~g~~~~~~~~g-- 263 (305)
.++.|+++||++|+.+.+.+.+++..+. ++.++.+|.+.+ .. ..+++.++|+++ .+|.. ...+..
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g~~-i~g~~~~~ 86 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGKEC-IGGCTDLE 86 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETTEE-EESHHHHH
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECCEE-EeccHHHH
Confidence 3677999999999999999998765542 355554443321 12 567899999984 35532 332221
Q ss_pred -CCCHHHHHHHHHhc
Q psy7938 264 -ERVLEALSNFVESG 277 (305)
Q Consensus 264 -~~~~~~l~~fi~~~ 277 (305)
......|.++|.+.
T Consensus 87 ~~~~~g~L~~~l~~~ 101 (105)
T 1kte_A 87 SMHKRGELLTRLQQV 101 (105)
T ss_dssp HHHHHTHHHHHHHHH
T ss_pred HHHHCCcHHHHHHHc
Confidence 12245677777654
No 404
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.13 E-value=5.1e-07 Score=73.04 Aligned_cols=120 Identities=15% Similarity=0.029 Sum_probs=76.5
Q ss_pred CCCCCeEEEEeeccC----ceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhh
Q psy7938 3 KDEVPSLRLIRLEED----MAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTV 77 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 77 (305)
++..|.+.+...+.. .+.+. ++. + +..|+.|| ++||++|+...|.+.++...++.
T Consensus 4 G~~~P~f~l~~~~g~~~~~~~~l~--~~~----g-k~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------------- 63 (187)
T 1we0_A 4 GTEVQPFRAQAFQSGKDFFEVTEA--DLK----G-KWSIVVFYPADFSFVCPTELEDVQKEYAELKK------------- 63 (187)
T ss_dssp TCBCCCCEEEEECSSSCCEEEETT--TTS----S-SEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH-------------
T ss_pred CCcCCCeEEeccCCCccceEecHH--HHC----C-CCEEEEEECCCCCcchHHHHHHHHHHHHHHHH-------------
Confidence 567899999888666 55552 332 1 56888999 99999998776666665333321
Q ss_pred hhHHHHHhhcCceEEEEEEeCCch-----------------------hHHHHHHHcCCCCC----CCCeEEEEecCcCc-
Q psy7938 78 RSFVTEFLAGNLKVLFVTINTDEE-----------------------DHQKILEFFGMSKD----EVPSLRLIRLEEDM- 129 (305)
Q Consensus 78 ~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~l~~~~~I~~~----~~Ptl~~~~~~~~~- 129 (305)
..+.++.|++|.. ....+++.|||... ++|++++++..+.+
T Consensus 64 -----------~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~ 132 (187)
T 1we0_A 64 -----------LGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGVIQ 132 (187)
T ss_dssp -----------TTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSBEE
T ss_pred -----------cCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCeEE
Confidence 1255555555421 13568889998411 68999999755442
Q ss_pred eeccCC-CCCCCHHHHHHHHHHHHc
Q psy7938 130 AKYKPA-TPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 130 ~~~~~~-~~~~~~~~l~~fv~~~~~ 153 (305)
..+.+. ....+.+++.+.+.....
T Consensus 133 ~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 133 AIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp EEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred EEEecCCCCCCCHHHHHHHHHHHhh
Confidence 333221 123467889998888765
No 405
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.12 E-value=7.7e-07 Score=72.58 Aligned_cols=121 Identities=12% Similarity=0.101 Sum_probs=74.7
Q ss_pred CCCCCeEEEEeec-------------c--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccC
Q psy7938 3 KDEVPSLRLIRLE-------------E--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYK 66 (305)
Q Consensus 3 ~~~~p~i~l~~~~-------------~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~ 66 (305)
++..|.+.+...+ . ..+.+ +++. -+.+|+.|| ++||++|+...|.+.++...++.
T Consensus 7 G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l--~~~~-----gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-- 77 (195)
T 2bmx_A 7 GDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITS--DEHP-----GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED-- 77 (195)
T ss_dssp TCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEET--TSST-----TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT--
T ss_pred CCcCCCcCcccccccccccccccccCCCccEeeH--HHhC-----CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH--
Confidence 5668888888876 3 34444 2321 246888999 99999998776666655333211
Q ss_pred CCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch-----------------------hHHHHHHHcCCCC---CCCCeE
Q psy7938 67 PASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE-----------------------DHQKILEFFGMSK---DEVPSL 120 (305)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----------------------~~~~l~~~~~I~~---~~~Ptl 120 (305)
..+.|+.|+.+.. ....+++.|||.. .++|++
T Consensus 78 ----------------------~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~ 135 (195)
T 2bmx_A 78 ----------------------RDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVT 135 (195)
T ss_dssp ----------------------TTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEE
T ss_pred ----------------------CCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceE
Confidence 1345555554421 1356788899841 168999
Q ss_pred EEEecCcCc-eeccCC-CCCCCHHHHHHHHHHHHcC
Q psy7938 121 RLIRLEEDM-AKYKPA-TPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 121 ~~~~~~~~~-~~~~~~-~~~~~~~~l~~fv~~~~~~ 154 (305)
++++..+.+ ..+.+. ....+.+++.+.+.....+
T Consensus 136 ~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~~ 171 (195)
T 2bmx_A 136 FIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQSD 171 (195)
T ss_dssp EEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC-
T ss_pred EEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhhC
Confidence 999855442 333221 1234789999999988763
No 406
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.09 E-value=2.6e-06 Score=66.96 Aligned_cols=87 Identities=16% Similarity=0.231 Sum_probs=56.0
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-----------------------ccCCcc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-----------------------EHTKIT- 243 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-----------------------~~~~i~- 243 (305)
.++.++|.|| ++||++|....|.+.++..+++. .++.++.|..+.... +.|++.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~-~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~ 107 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQ-VNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAW 107 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGG-CSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccc-cCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcc
Confidence 3678999998 99999999999999999888864 356666666554221 234442
Q ss_pred ----------cccEEEEEeCCCceEEeee-----CCCCHHHHHHHHHh
Q psy7938 244 ----------SFPTLKLYAKDDNRVIDYN-----GERVLEALSNFVES 276 (305)
Q Consensus 244 ----------~~Ptl~~f~~g~~~~~~~~-----g~~~~~~l~~fi~~ 276 (305)
..|++++++++++....+. +..+.+++.+.|++
T Consensus 108 ~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~ 155 (157)
T 4g2e_A 108 EFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKS 155 (157)
T ss_dssp ECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHH
T ss_pred ccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHH
Confidence 4688899988877544433 34567888888865
No 407
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.07 E-value=1.8e-05 Score=66.75 Aligned_cols=88 Identities=9% Similarity=0.070 Sum_probs=65.1
Q ss_pred CCCcEEEEEEC-CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------------------------------
Q psy7938 189 KSKHVLVEFYA-PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------------------------------ 237 (305)
Q Consensus 189 ~~~~~lv~f~~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------------------------------ 237 (305)
.++.++|.||+ .||++|....+.+.++.+.++. .++.++.|..+....
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~-~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~ 154 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRA-INTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQIS 154 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHH-CCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHH
Confidence 36899999999 9999999999999999999975 356776666553221
Q ss_pred ccCCcc------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 238 EHTKIT------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 238 ~~~~i~------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
+.|++. .+|+++++++++.....+.+ ..+.+++.+.|...
T Consensus 155 ~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 155 KDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 334565 58999999988875444444 45677788777653
No 408
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.05 E-value=1.2e-06 Score=65.00 Aligned_cols=80 Identities=18% Similarity=0.255 Sum_probs=50.4
Q ss_pred CcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc--------c-ccCCcccccEEEEEeCCCceEEee
Q psy7938 191 KHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE--------L-EHTKITSFPTLKLYAKDDNRVIDY 261 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~--------~-~~~~i~~~Ptl~~f~~g~~~~~~~ 261 (305)
...++.|+++||++|+.+.+.+.+++... +. +..+|++.+. . +.+++.++|++++ +| +....+
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~~~~~---~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g-~~igg~ 89 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKFSFKR---GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GK-TSIGGY 89 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTSCBCT---TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TT-EEEESH
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHcCCCc---Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CC-EEEeCc
Confidence 34577899999999999999887754331 12 5556665542 2 5789999999754 44 323333
Q ss_pred eC---CCCHHHHHHHHHhcC
Q psy7938 262 NG---ERVLEALSNFVESGG 278 (305)
Q Consensus 262 ~g---~~~~~~l~~fi~~~~ 278 (305)
.+ ..+.+.|.++|.+.+
T Consensus 90 ~~~~~~~~~~~L~~~L~~~g 109 (114)
T 2hze_A 90 SDLLEIDNMDALGDILSSIG 109 (114)
T ss_dssp HHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHHHCChHHHHHHHcC
Confidence 22 113345777776543
No 409
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.03 E-value=1.1e-05 Score=68.39 Aligned_cols=87 Identities=10% Similarity=0.077 Sum_probs=64.9
Q ss_pred CC-cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc----------------------------c-cc
Q psy7938 190 SK-HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE----------------------------L-EH 239 (305)
Q Consensus 190 ~~-~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~----------------------------~-~~ 239 (305)
++ .+|++|+++||+.|....+.+.+++.+|+. .++.++.|+++... . +.
T Consensus 33 GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~-~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 33 GKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR-LGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh-CCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 45 466688999999999999999999999964 35777777765421 1 44
Q ss_pred CCcc-------cccEEEEEeCCCceEEeeeCC----CCHHHHHHHHHhc
Q psy7938 240 TKIT-------SFPTLKLYAKDDNRVIDYNGE----RVLEALSNFVESG 277 (305)
Q Consensus 240 ~~i~-------~~Ptl~~f~~g~~~~~~~~g~----~~~~~l~~fi~~~ 277 (305)
|++. .+|+++++++++.....+.|. ++.++|.+.|...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 5665 899999999887755544443 5788888888753
No 410
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.00 E-value=2.9e-05 Score=61.08 Aligned_cols=85 Identities=8% Similarity=0.039 Sum_probs=59.9
Q ss_pred CCCcEEEEEEC-CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------cccCCc
Q psy7938 189 KSKHVLVEFYA-PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------LEHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~~-~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------~~~~~i 242 (305)
.++.++|.||+ .||++|....+.+.++.+.+ .++.++.|..+... .+.|++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~---~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 117 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL---DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYAL 117 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC---TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc---CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCC
Confidence 36789999995 99999999999999998887 35666666544321 023344
Q ss_pred c----c--ccEEEEEeCCCceEEeeeCC-----CCHHHHHHHHHh
Q psy7938 243 T----S--FPTLKLYAKDDNRVIDYNGE-----RVLEALSNFVES 276 (305)
Q Consensus 243 ~----~--~Ptl~~f~~g~~~~~~~~g~-----~~~~~l~~fi~~ 276 (305)
. + .|++++++++++....+.|. .+.+.+.+.|++
T Consensus 118 ~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 118 LINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp BCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred ccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 4 2 39999999888866666652 344778777764
No 411
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.98 E-value=2.3e-06 Score=67.68 Aligned_cols=117 Identities=9% Similarity=0.054 Sum_probs=67.8
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCc-ccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGN-LKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~w-c~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
+...|.+.+...+...+.+. ++ . -+..++.||++| |++|+...|.+.++...+
T Consensus 21 G~~~p~f~l~~~~G~~~~l~--~~----~-gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~------------------- 74 (167)
T 2jsy_A 21 GDQAPDFTVLTNSLEEKSLA--DM----K-GKVTIISVIPSIDTGVCDAQTRRFNEEAAKL------------------- 74 (167)
T ss_dssp TSCCCCCEEEBTTCCEEEHH--HH----T-TSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-------------------
T ss_pred CCcCCceEEECCCCCEeeHH--Hh----C-CCeEEEEEecCCCCCchHHHHHHHHHHHHHc-------------------
Confidence 45678887776665555552 11 1 246788999999 999987766655553222
Q ss_pred HHHhhcCceEEEEEEeCCch---------------------hHHHHHHHcCCCCC--C--CCeEEEEecCcCc-eeccCC
Q psy7938 82 TEFLAGNLKVLFVTINTDEE---------------------DHQKILEFFGMSKD--E--VPSLRLIRLEEDM-AKYKPA 135 (305)
Q Consensus 82 ~~~~~~~~~v~~~~vd~~~~---------------------~~~~l~~~~~I~~~--~--~Ptl~~~~~~~~~-~~~~~~ 135 (305)
..+.++.|+.|.. ....+++.||+... + .|+..+++..+.+ ..+.+.
T Consensus 75 -------~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~ 147 (167)
T 2jsy_A 75 -------GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVS 147 (167)
T ss_dssp -------SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECS
T ss_pred -------CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecC
Confidence 1233333333210 22568899999621 1 4999999865543 333221
Q ss_pred --CCCCCHHHHHHHHHHHH
Q psy7938 136 --TPEISVDTVRSFVTEFL 152 (305)
Q Consensus 136 --~~~~~~~~l~~fv~~~~ 152 (305)
....+.+++.+.+.+.+
T Consensus 148 ~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 148 EATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp BTTSCCCSHHHHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHHhh
Confidence 12335577877777653
No 412
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.98 E-value=4.2e-05 Score=60.65 Aligned_cols=84 Identities=7% Similarity=0.033 Sum_probs=59.4
Q ss_pred CCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------------------------ccCCcc-
Q psy7938 190 SKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------------------------EHTKIT- 243 (305)
Q Consensus 190 ~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------------------------~~~~i~- 243 (305)
++.++|.|| +.||++|....+.+.++.+.+ .++.++.|..+.... +.|++.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~---~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~ 123 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM---EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDMEKYGVLI 123 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC---TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGGGGGTCBB
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc---CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcHHHhCCEe
Confidence 678999998 899999999999999998877 345555554432210 233443
Q ss_pred --------cccEEEEEeCCCceEEeeeC-----CCCHHHHHHHHHh
Q psy7938 244 --------SFPTLKLYAKDDNRVIDYNG-----ERVLEALSNFVES 276 (305)
Q Consensus 244 --------~~Ptl~~f~~g~~~~~~~~g-----~~~~~~l~~fi~~ 276 (305)
..|+++++++++.....+.| ..+.+.+.+.|++
T Consensus 124 ~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~ 169 (171)
T 2yzh_A 124 GEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKE 169 (171)
T ss_dssp CSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHH
T ss_pred cccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHh
Confidence 25999999988876666654 4456788887765
No 413
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.96 E-value=2.4e-06 Score=70.89 Aligned_cols=107 Identities=14% Similarity=0.117 Sum_probs=57.8
Q ss_pred HHhhhhhcCcccccccccceeeeeccc-ccc-c--CCCCCcch--h----------hhhhhHHHHHhhcCceEEEEEEeC
Q psy7938 35 SFVTEFLAGNLKHSKFKKNLYIHLEED-MAK-Y--KPASPEIN--V----------DTVRSFVTEFLAGNLKVLFVTINT 98 (305)
Q Consensus 35 ~~iv~f~a~wc~~c~~~~p~~~~~~~~-~~~-~--~~~~~~~~--~----------~~~~~~~~~~~~~~~~v~~~~vd~ 98 (305)
..|+.|+++||++|+.+.|.+.++... +.- | ++...... . +....+..... ...+.+..+..
T Consensus 88 ~~vv~F~d~~Cp~C~~~~~~l~~l~~~~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~--~~~~~~~~~~~ 165 (216)
T 1eej_A 88 HVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMA--GKSVAPASCDV 165 (216)
T ss_dssp EEEEEEECTTCHHHHHHHTTHHHHHHTTEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHT--TCCCCCCCCSC
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHhCCcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHh--CCCCChhHHHH
Confidence 456779999999999998887766431 100 0 11110000 0 00000100011 11121111112
Q ss_pred CchhHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 99 DEEDHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 99 ~~~~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
...++..+++++||. ++||+ ++.+| ..+ .|..+.++|.+++....
T Consensus 166 ~v~~~~~l~~~~gV~--gtPt~-v~~dG---~~~---~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 166 DIADHYALGVQLGVS--GTPAV-VLSNG---TLV---PGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CHHHHHHHHHHHTCC--SSSEE-ECTTS---CEE---ESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC--ccCEE-EEcCC---eEe---cCCCCHHHHHHHHHHhh
Confidence 223667899999998 99999 45444 233 26678889999988764
No 414
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.95 E-value=3.2e-06 Score=69.19 Aligned_cols=135 Identities=8% Similarity=-0.034 Sum_probs=68.9
Q ss_pred CCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCcccc-cccccceeeeecccccc-----c--C--CCCC-cchh
Q psy7938 6 VPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLKH-SKFKKNLYIHLEEDMAK-----Y--K--PASP-EINV 74 (305)
Q Consensus 6 ~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~-c~~~~p~~~~~~~~~~~-----~--~--~~~~-~~~~ 74 (305)
.|.+.+...+...+.+. ++ . -+.+|+.||++||++ |+...|.+.++...++. + . ...+ .-+.
T Consensus 21 ~p~f~l~d~~G~~v~l~--~~----~-Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~ 93 (200)
T 2b7k_A 21 GGPFHLEDMYGNEFTEK--NL----L-GKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSP 93 (200)
T ss_dssp CCCCEEEETTSCEEEGG--GG----T-TSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCH
T ss_pred CCCEEEEcCCCCEEeHH--Hc----C-CCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCH
Confidence 37788877776666662 21 1 246788999999998 98776666664332211 0 0 0000 0011
Q ss_pred hhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCC--------------CCCeEEEEecCcCceeccCCCCCCC
Q psy7938 75 DTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKD--------------EVPSLRLIRLEEDMAKYKPATPEIS 140 (305)
Q Consensus 75 ~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~--------------~~Ptl~~~~~~~~~~~~~~~~~~~~ 140 (305)
+.+..++. ++.....++.. +......+++.|||... ..|++.+++..+.+.... .+..+
T Consensus 94 ~~~~~~~~---~~~~~~~~l~~--~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~--~g~~~ 166 (200)
T 2b7k_A 94 AVLKEYLS---DFHPSILGLTG--TFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDAL--GRNYD 166 (200)
T ss_dssp HHHHHHHT---TSCTTCEEEEC--CHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEE--CTTCC
T ss_pred HHHHHHHH---HcCCCceEEeC--CHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEe--CCCCC
Confidence 11111111 11111112211 11245678899998510 224777777655433222 24566
Q ss_pred HHHHHHHHHHHHcC
Q psy7938 141 VDTVRSFVTEFLAG 154 (305)
Q Consensus 141 ~~~l~~fv~~~~~~ 154 (305)
.+.+.+.+...+..
T Consensus 167 ~~~~~~~i~~~l~~ 180 (200)
T 2b7k_A 167 EKTGVDKIVEHVKS 180 (200)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 67777777777653
No 415
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.94 E-value=3.7e-05 Score=64.65 Aligned_cols=86 Identities=15% Similarity=0.192 Sum_probs=59.7
Q ss_pred CCCcEEEEEE-CCCChhhh-hHHHHHHHHHHHhCCCCce-EEEEEeCCccc------------------------cccCC
Q psy7938 189 KSKHVLVEFY-APWCGHCK-QLAPIYDKLGEKFADRDDI-TIAKIDATVNE------------------------LEHTK 241 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~-~~~~~~~~la~~~~~~~~v-~~~~id~~~~~------------------------~~~~~ 241 (305)
.++.++|.|| ++||++|. ...|.+.+++..++. .++ .++.|..+... .+.|+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~-~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~g 110 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK-YGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMG 110 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH-TTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhC
Confidence 4678999999 99999999 899999999999864 346 56666554321 03345
Q ss_pred cc-----------cccEEEEEeCCCceEEeeeCC---------CCHHHHHHHHHh
Q psy7938 242 IT-----------SFPTLKLYAKDDNRVIDYNGE---------RVLEALSNFVES 276 (305)
Q Consensus 242 i~-----------~~Ptl~~f~~g~~~~~~~~g~---------~~~~~l~~fi~~ 276 (305)
+. ..|+.+++ +++.....+.|. .+.+++.+.|..
T Consensus 111 v~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 111 MLVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp CEEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred ceeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 54 34888888 555545555553 467777777764
No 416
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.94 E-value=2.9e-07 Score=63.74 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=44.7
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc-hhHHHHHHHcCCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE-EDHQKILEFFGMSKD 115 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-~~~~~l~~~~~I~~~ 115 (305)
|+.|+++||++|+.+.+.+.+. .+.|..+|.+. .+..+...++|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------------------------------~i~~~~vdi~~~~~~~~~~~~~g~~-- 49 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------------------------------GFDFEMINVDRVPEAAEALRAQGFR-- 49 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------------------------------TCCCEEEETTTCHHHHHHHHHTTCC--
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------------------------------CCCeEEEECCCCHHHHHHHHHhCCC--
Confidence 4569999999998776555443 25567788872 1222333458997
Q ss_pred CCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 116 EVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 116 ~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
++|++. ..|. .. +..+.++|.+++.+
T Consensus 50 ~vP~~~--~~g~---~~----~g~~~~~l~~~l~~ 75 (81)
T 1h75_A 50 QLPVVI--AGDL---SW----SGFRPDMINRLHPA 75 (81)
T ss_dssp SSCEEE--ETTE---EE----ESCCHHHHGGGSCC
T ss_pred ccCEEE--ECCE---EE----ecCCHHHHHHHHhc
Confidence 999983 3342 22 23556666666544
No 417
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.90 E-value=4e-05 Score=60.43 Aligned_cols=72 Identities=11% Similarity=0.145 Sum_probs=51.2
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-------------------------ccCCc
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-------------------------EHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-------------------------~~~~i 242 (305)
.++.++|.|| +.||++|....|.+.++.+.+ .++.++.|..+.... +.|++
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~---~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 118 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL---SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGV 118 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS---TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc---CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCc
Confidence 3678999998 899999999999999999988 245555555442210 23344
Q ss_pred cc---------ccEEEEEeCCCceEEeeeC
Q psy7938 243 TS---------FPTLKLYAKDDNRVIDYNG 263 (305)
Q Consensus 243 ~~---------~Ptl~~f~~g~~~~~~~~g 263 (305)
.. .|+.+++++++.....+.|
T Consensus 119 ~~~~~~~~g~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 119 DIQTGPLAGLTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEEEEC
T ss_pred eecccccCCccceeEEEEcCCCEEEEEEeC
Confidence 32 4999999888776666654
No 418
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.89 E-value=4.4e-06 Score=68.11 Aligned_cols=119 Identities=16% Similarity=0.134 Sum_probs=73.6
Q ss_pred CCCCCeEEEEee-cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhh
Q psy7938 3 KDEVPSLRLIRL-EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVR 78 (305)
Q Consensus 3 ~~~~p~i~l~~~-~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (305)
+...|.+.+... +. ..+.+. ++ . -+.+|+.|| ++||++|+...|.+.++...++.
T Consensus 8 G~~aP~f~l~~~~~g~~~~v~l~--~~----~-gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~-------------- 66 (197)
T 1qmv_A 8 GKPAPDFKATAVVDGAFKEVKLS--DY----K-GKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK-------------- 66 (197)
T ss_dssp TSBCCCCEEEEEETTEEEEEEGG--GG----T-TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT--------------
T ss_pred CCCCCCeEeEeecCCCccEEEHH--HH----C-CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--------------
Confidence 567888888876 55 455552 22 1 146788999 99999998776655555322211
Q ss_pred hHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCCCC----CCCeEEEEecCcC
Q psy7938 79 SFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMSKD----EVPSLRLIRLEED 128 (305)
Q Consensus 79 ~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~~~----~~Ptl~~~~~~~~ 128 (305)
..+.|+.|++|.. ....+++.||+... .+|++++++..+.
T Consensus 67 ----------~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~ 136 (197)
T 1qmv_A 67 ----------LGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGV 136 (197)
T ss_dssp ----------TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB
T ss_pred ----------CCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCc
Confidence 1355555555521 12468899998511 4899999976554
Q ss_pred ce-eccCC-CCCCCHHHHHHHHHHHH
Q psy7938 129 MA-KYKPA-TPEISVDTVRSFVTEFL 152 (305)
Q Consensus 129 ~~-~~~~~-~~~~~~~~l~~fv~~~~ 152 (305)
+. .+.+. ....+.+++.+.+....
T Consensus 137 i~~~~~g~~~~~~~~~e~l~~l~~l~ 162 (197)
T 1qmv_A 137 LRQITVNDLPVGRSVDEALRLVQAFQ 162 (197)
T ss_dssp EEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCCHHHHHHHHHhcc
Confidence 32 22221 12457788888888764
No 419
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.89 E-value=3.2e-05 Score=61.09 Aligned_cols=84 Identities=14% Similarity=0.084 Sum_probs=57.7
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------cccCCc
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------LEHTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------~~~~~i 242 (305)
.+++++|.|| +.||++|....+.+.++.+. .++.++.|..+... .+.|++
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~----~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv 120 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK----EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGV 120 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT----TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTC
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc----CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCC
Confidence 3678899998 78999999999999888665 34555555444321 133455
Q ss_pred cc------ccEEEEEeCCCceEEeeeC-----CCCHHHHHHHHHh
Q psy7938 243 TS------FPTLKLYAKDDNRVIDYNG-----ERVLEALSNFVES 276 (305)
Q Consensus 243 ~~------~Ptl~~f~~g~~~~~~~~g-----~~~~~~l~~fi~~ 276 (305)
.. .|++++++++++....+.+ ..+.+.+.+.|++
T Consensus 121 ~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 121 VMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred ccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 53 8999999988875444332 3466788877764
No 420
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=97.88 E-value=3.6e-06 Score=68.34 Aligned_cols=120 Identities=9% Similarity=0.061 Sum_probs=72.4
Q ss_pred CCCCCeEEEEee--cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhh
Q psy7938 3 KDEVPSLRLIRL--EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTV 77 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 77 (305)
++..|.+.+... +. ..+.+. ++ .+ -+..|+.|| ++||++|+...|.+.++...++.
T Consensus 3 G~~aP~f~l~~~~~~G~~~~~~l~--~~---~~-gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~------------- 63 (192)
T 2h01_A 3 QGQAPSFKAEAVFGDNTFGEVSLS--DF---IG-KKYVLLYFYPLDFTFVCPSEIIALDKALDSFKE------------- 63 (192)
T ss_dssp SSBCCCCEEEEECTTSCEEEEEGG--GG---TT-TCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHH-------------
T ss_pred CCcCCCcEeEeeecCCceeEEeHH--HH---cC-CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-------------
Confidence 567888888887 66 455552 22 01 246788999 99999998776666555333311
Q ss_pred hhHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCC---CCCCCeEEEEecCcC
Q psy7938 78 RSFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMS---KDEVPSLRLIRLEED 128 (305)
Q Consensus 78 ~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~---~~~~Ptl~~~~~~~~ 128 (305)
..+.++.|++|.. ....+++.||+. +..+|++++++..+.
T Consensus 64 -----------~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~ 132 (192)
T 2h01_A 64 -----------RNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGV 132 (192)
T ss_dssp -----------TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSB
T ss_pred -----------CCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCE
Confidence 1244444444321 135688999984 115899999986554
Q ss_pred ce-eccCC-CCCCCHHHHHHHHHHHH
Q psy7938 129 MA-KYKPA-TPEISVDTVRSFVTEFL 152 (305)
Q Consensus 129 ~~-~~~~~-~~~~~~~~l~~fv~~~~ 152 (305)
+. .+.+. ....+.+++.+.+....
T Consensus 133 i~~~~~g~~~~~~~~~~l~~~l~~l~ 158 (192)
T 2h01_A 133 VQHLLVNNLALGRSVDEILRLIDALQ 158 (192)
T ss_dssp EEEEEEGGGSSGGGHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCCCHHHHHHHHHHHh
Confidence 32 22221 12346788888888765
No 421
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.88 E-value=2e-06 Score=58.25 Aligned_cols=68 Identities=7% Similarity=0.136 Sum_probs=45.0
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHH---HHcCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKIL---EFFGMS 113 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~---~~~~I~ 113 (305)
++.|+++||++|+...+.+.+. .+.|..+|.+ +...+. +.+|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------------------------------~i~~~~~di~--~~~~~~~~~~~~~~~ 49 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------------------------------GLAYNTVDIS--LDDEARDYVMALGYV 49 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------------------------------TCCCEEEETT--TCHHHHHHHHHTTCB
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------------------------------CCCcEEEECC--CCHHHHHHHHHcCCC
Confidence 4568999999998776555443 2556777887 333333 379997
Q ss_pred CCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHH
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFV 148 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv 148 (305)
++|++.+ .| ... ++.+.+.+.+++
T Consensus 50 --~vP~l~~--~g---~~~----~g~~~~~l~~~l 73 (75)
T 1r7h_A 50 --QAPVVEV--DG---EHW----SGFRPERIKQLQ 73 (75)
T ss_dssp --CCCEEEE--TT---EEE----ESCCHHHHHHHH
T ss_pred --ccCEEEE--CC---eEE----cCCCHHHHHHHH
Confidence 9999873 33 223 345677787776
No 422
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.88 E-value=3.3e-05 Score=65.70 Aligned_cols=86 Identities=10% Similarity=0.077 Sum_probs=63.2
Q ss_pred CCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------------------------------c
Q psy7938 190 SKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------------------------------E 238 (305)
Q Consensus 190 ~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------------------------------~ 238 (305)
++.++|+|| +.||+.|....+.+.++.+.|+. .++.++.|..+.... +
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~-~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRS-INTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 678999998 99999999999999999999974 357777676654321 2
Q ss_pred cCCcc------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHh
Q psy7938 239 HTKIT------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVES 276 (305)
Q Consensus 239 ~~~i~------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~ 276 (305)
.|++. .+|+++++++++.....+.+ .++.+++.+.|..
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 23343 47999999988876555444 4567777777764
No 423
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.86 E-value=2.9e-06 Score=67.86 Aligned_cols=49 Identities=6% Similarity=-0.006 Sum_probs=33.6
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCc-ccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGN-LKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~w-c~~c~~~~p~~~~~ 58 (305)
++..|.+.+...+...+.+. ++. -+..|+.||++| |++|+...|.+.++
T Consensus 21 G~~~P~f~l~~~~G~~v~l~--~~~-----gk~vvl~F~~t~~C~~C~~~~~~l~~l 70 (175)
T 1xvq_A 21 GSPAPAFTLTGGDLGVISSD--QFR-----GKSVLLNIFPSVDTPVCATSVRTFDER 70 (175)
T ss_dssp TSBCCCCEEECTTSCEEEGG--GGT-----TSCEEEEECSCCCSSCCCHHHHHHHHH
T ss_pred CCcCCCeEEECCCCCEEeHH--HcC-----CCEEEEEEEeCCCCchHHHHHHHHHHH
Confidence 45578888777666555552 221 246788999999 99998776666555
No 424
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=97.86 E-value=6.8e-06 Score=65.54 Aligned_cols=41 Identities=12% Similarity=0.148 Sum_probs=31.1
Q ss_pred hHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 102 DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 102 ~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.+..++.++||. ++||+++ +| ..+ .|..+.+.|.+.+.+.+
T Consensus 132 ~~~~~a~~~gv~--gtPt~~i--~g---~~~---~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 132 QSMALAQKLGFN--GTPSFVV--ED---ALV---PGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHTCC--SSSEEEE--TT---EEE---CSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc--cCCEEEE--CC---EEe---eCCCCHHHHHHHHHHHH
Confidence 445688999998 9999987 33 334 36778899999988765
No 425
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.85 E-value=2.3e-05 Score=61.96 Aligned_cols=132 Identities=12% Similarity=0.135 Sum_probs=70.7
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHH----HHHhhhhh-cCcccccccccceeeeecccccccC----CCCCcch
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTV----RSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYK----PASPEIN 73 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~----~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~----~~~~~~~ 73 (305)
|+..|.+.|...+...+.+ .++ +.+++.|| +.||++|+...|.+.++...++... .-+. -+
T Consensus 8 G~~aPdF~l~~~~G~~v~L---------sd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~-d~ 77 (164)
T 4gqc_A 8 GEKAPDFTLPNQDFEPVNL---------YEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISV-DS 77 (164)
T ss_dssp TSBCCCCEEEBTTSCEEEH---------HHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEES-SC
T ss_pred CCCCcCcEeECCCCCEEEH---------HHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecC-CC
Confidence 5678888887776666665 222 34566777 9999999877666666544443210 0000 01
Q ss_pred hhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC--------CCCCeEEEEecCcCce-eccCC--CCCCCHH
Q psy7938 74 VDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK--------DEVPSLRLIRLEEDMA-KYKPA--TPEISVD 142 (305)
Q Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~--------~~~Ptl~~~~~~~~~~-~~~~~--~~~~~~~ 142 (305)
.+....+.. +++-...++ .|- ..++++.|||.. ...|+..+++..+.+. .+... .+..+.+
T Consensus 78 ~~~~~~~~~---~~~~~fp~l-~D~----~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ 149 (164)
T 4gqc_A 78 PWCLKKFKD---ENRLAFNLL-SDY----NREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYD 149 (164)
T ss_dssp HHHHHHHHH---HTTCCSEEE-ECT----TSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHH
T ss_pred HHHHHHHHH---hcCccccee-ecC----chHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHH
Confidence 222222222 212222222 233 357888998831 1257778887655432 22211 2334677
Q ss_pred HHHHHHHHHH
Q psy7938 143 TVRSFVTEFL 152 (305)
Q Consensus 143 ~l~~fv~~~~ 152 (305)
++.+-+++..
T Consensus 150 eil~~l~~l~ 159 (164)
T 4gqc_A 150 EVVREANKIA 159 (164)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777776653
No 426
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.83 E-value=4.4e-05 Score=60.06 Aligned_cols=43 Identities=16% Similarity=0.268 Sum_probs=33.1
Q ss_pred CCCcEEEEEE-CCCChhhh-hHHHHHHHHHHHhCCCCceE-EEEEeC
Q psy7938 189 KSKHVLVEFY-APWCGHCK-QLAPIYDKLGEKFADRDDIT-IAKIDA 232 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~-~~~~~~~~la~~~~~~~~v~-~~~id~ 232 (305)
.++.++|.|| ++||++|. ...|.+.++.+.++.. ++. ++.|..
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~-~v~~vv~Is~ 79 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSK-GVTEILCISV 79 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHT-TCCCEEEEES
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEEC
Confidence 4678999999 89999999 8999999999888532 344 444433
No 427
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.81 E-value=9.2e-05 Score=59.13 Aligned_cols=43 Identities=23% Similarity=0.605 Sum_probs=34.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEe
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKID 231 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id 231 (305)
++++++|.|+.-.|++|+.+.+.+.++.+.+.....+.+..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~ 62 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVS 62 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecC
Confidence 3568999999999999999999999999998765555555443
No 428
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.79 E-value=5.8e-06 Score=68.35 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=31.1
Q ss_pred hHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHH
Q psy7938 102 DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTE 150 (305)
Q Consensus 102 ~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~ 150 (305)
++.++++++||+ +.||+++ .+|. .+ .|..+.++|.+++..
T Consensus 169 ~~~~l~~~~gV~--gTPt~vi-~nG~---~~---~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 169 KHYELGIQFGVR--GTPSIVT-STGE---LI---GGYLKPADLLRALEE 208 (211)
T ss_dssp HHHHHHHHHTCC--SSCEEEC-TTSC---CC---CSCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCC--cCCEEEE-eCCE---Ee---cCCCCHHHHHHHHHh
Confidence 667899999998 9999987 4442 33 366788999998865
No 429
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=97.79 E-value=7.7e-06 Score=64.75 Aligned_cols=88 Identities=7% Similarity=0.115 Sum_probs=61.6
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----------------------cccCCcc-
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----------------------LEHTKIT- 243 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----------------------~~~~~i~- 243 (305)
.++++++.|| ++||++|....+.+.++..+++. .++.++.|..+... .+.|++.
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ygv~~ 110 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEK-ANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKLYNVYH 110 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGGGG-SSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEE
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhc-cCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHHcCCcc
Confidence 5778888888 99999999998999888888864 35666666655322 1334542
Q ss_pred ---------cccEEEEEeCCCceEEeeeC-----CCCHHHHHHHHHhc
Q psy7938 244 ---------SFPTLKLYAKDDNRVIDYNG-----ERVLEALSNFVESG 277 (305)
Q Consensus 244 ---------~~Ptl~~f~~g~~~~~~~~g-----~~~~~~l~~fi~~~ 277 (305)
..|+++++++++.....+.+ ..+.+++.+-+++.
T Consensus 111 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 111 EDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp EEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 36889999888875444433 34677888777654
No 430
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.77 E-value=3.5e-05 Score=54.43 Aligned_cols=70 Identities=19% Similarity=0.235 Sum_probs=47.7
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC---cc-----cc-ccCCcccccEEEEEeCCCceEEeeeC
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT---VN-----EL-EHTKITSFPTLKLYAKDDNRVIDYNG 263 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~---~~-----~~-~~~~i~~~Ptl~~f~~g~~~~~~~~g 263 (305)
.++.|+++||++|+.+...+.++.. .+....+|.. .+ .. +.+++.++|++++ +| . . .|
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~gi------~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g-~-~---i~ 79 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREGV------DFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GD-K-H---VL 79 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHTC------CCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TT-E-E---EE
T ss_pred eEEEEECCCChHHHHHHHHHHHcCC------CcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CC-E-E---Ee
Confidence 3667999999999999998888742 2344444421 11 11 4678899999987 44 2 1 23
Q ss_pred CCCHHHHHHHHH
Q psy7938 264 ERVLEALSNFVE 275 (305)
Q Consensus 264 ~~~~~~l~~fi~ 275 (305)
..+.+.|.++|+
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 458899999886
No 431
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.76 E-value=8.1e-06 Score=66.82 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=73.3
Q ss_pred CCCCCeEEEEee--cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhh
Q psy7938 3 KDEVPSLRLIRL--EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTV 77 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 77 (305)
+...|.+.+... +. ..+.+. ++ . -+..|+.|| ++||++|+...|.+.++...++.
T Consensus 9 G~~aP~f~l~~~~~~g~~~~v~l~--~~----~-gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~------------- 68 (202)
T 1uul_A 9 LHPAPDFNETALMPNGTFKKVALT--SY----K-GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSD------------- 68 (202)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGG--GG----T-TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHT-------------
T ss_pred CCcCCCcEeeeeecCCCccEEEHH--Hh----C-CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHH-------------
Confidence 566888888876 45 445442 22 1 246788999 99999998766655555333211
Q ss_pred hhHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCCCC----CCCeEEEEecCc
Q psy7938 78 RSFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMSKD----EVPSLRLIRLEE 127 (305)
Q Consensus 78 ~~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~~~----~~Ptl~~~~~~~ 127 (305)
..+.|+.|++|.. ....+++.|||... .+|++.+++..+
T Consensus 69 -----------~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G 137 (202)
T 1uul_A 69 -----------IGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQ 137 (202)
T ss_dssp -----------TTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTS
T ss_pred -----------CCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCC
Confidence 1244555554421 13468888998411 689999998655
Q ss_pred Cce-eccC-CCCCCCHHHHHHHHHHHHc
Q psy7938 128 DMA-KYKP-ATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 128 ~~~-~~~~-~~~~~~~~~l~~fv~~~~~ 153 (305)
.+. .+.+ .....+.+++.+.+.....
T Consensus 138 ~i~~~~~g~~~~~~~~~ell~~l~~l~~ 165 (202)
T 1uul_A 138 NLRQITVNDLPVGRDVDEALRLVKAFQF 165 (202)
T ss_dssp BEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHhhh
Confidence 432 2222 1224577889988887753
No 432
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.76 E-value=0.00025 Score=56.20 Aligned_cols=88 Identities=14% Similarity=0.254 Sum_probs=59.4
Q ss_pred CCCcEEEEEECCCCh-hhhhHHHHHHHHHHHhCCC-CceEEEEEeCCcc-c--------ccc------------------
Q psy7938 189 KSKHVLVEFYAPWCG-HCKQLAPIYDKLGEKFADR-DDITIAKIDATVN-E--------LEH------------------ 239 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~-~C~~~~~~~~~la~~~~~~-~~v~~~~id~~~~-~--------~~~------------------ 239 (305)
.++.++|.||.+||+ .|....+.+.++.+.++.. .++.++.|.++.. + .+.
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dtp~~l~~y~~~~~~~~~~~~~ltg~~~~~ 110 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLED 110 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTTCSCCTTEEEEBCSCHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCcccccHHHHHHHHHHcCCCCCCceecCcccHHH
Confidence 478999999999996 7999999998888877432 3565655544321 0 011
Q ss_pred ------------------CCcccccEEEEEeCCCceEEeeeCC--CCHHHHHHHHHh
Q psy7938 240 ------------------TKITSFPTLKLYAKDDNRVIDYNGE--RVLEALSNFVES 276 (305)
Q Consensus 240 ------------------~~i~~~Ptl~~f~~g~~~~~~~~g~--~~~~~l~~fi~~ 276 (305)
+.+.+.|+++++.++++....|.|. ...+.|.+-|++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~ 167 (170)
T 4hde_A 111 ITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKR 167 (170)
T ss_dssp HHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHH
T ss_pred HHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHH
Confidence 1233457899999888866678873 345667666653
No 433
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.74 E-value=1.3e-05 Score=62.26 Aligned_cols=86 Identities=15% Similarity=0.208 Sum_probs=50.1
Q ss_pred cChhHHHhcCCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcc-c-----c-ccCCcccccEEEEEe
Q psy7938 180 SNFDEIAFDKSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVN-E-----L-EHTKITSFPTLKLYA 252 (305)
Q Consensus 180 ~~f~~~v~~~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~-~-----~-~~~~i~~~Ptl~~f~ 252 (305)
..+.+.+.. ..+ +.|+++||++|+.+.+.|.+++. .+..+.+|.+.. . . ..+++.++|++++
T Consensus 40 ~~~~~~i~~--~~V-vvf~~~~Cp~C~~~k~~L~~~~i------~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi-- 108 (146)
T 2ht9_A 40 NQIQETISD--NCV-VIFSKTSCSYCTMAKKLFHDMNV------NYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV-- 108 (146)
T ss_dssp HHHHHHHHH--CSE-EEEECTTCHHHHHHHHHHHHHTC------CCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEE--
T ss_pred HHHHHHhcC--CCE-EEEECCCChhHHHHHHHHHHcCC------CeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEE--
Confidence 345555532 234 44999999999999999988732 334444443311 1 2 5688999999843
Q ss_pred CCCceEEeee---CCCCHHHHHHHHHhc
Q psy7938 253 KDDNRVIDYN---GERVLEALSNFVESG 277 (305)
Q Consensus 253 ~g~~~~~~~~---g~~~~~~l~~fi~~~ 277 (305)
+|.. +..+. +......|.++|...
T Consensus 109 ~G~~-igG~d~l~~l~~~g~L~~~L~~~ 135 (146)
T 2ht9_A 109 NGTF-IGGATDTHRLHKEGKLLPLVHQC 135 (146)
T ss_dssp TTEE-EESHHHHHHHHHTTCHHHHHHHT
T ss_pred CCEE-EeCchHHHHHHHcChHHHHHHHc
Confidence 4422 22221 122334567777654
No 434
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.73 E-value=0.00019 Score=58.53 Aligned_cols=71 Identities=10% Similarity=0.188 Sum_probs=51.0
Q ss_pred CCCcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-----c--------------------cCCc
Q psy7938 189 KSKHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-----E--------------------HTKI 242 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-----~--------------------~~~i 242 (305)
.++.++|.|| +.||+.|....+.+.++.+.+ .++.++.|..+.... + .|++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~---~~v~vv~Is~D~~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~ygv 153 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL---ENTVVLCISSDLPFAQSRFCGAEGLSNVITLSTLRGADFKQAYGV 153 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS---TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEETTSCTHHHHHTTC
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh---CCCEEEEEECCCHHHHHHHHHHcCCCCceEEecCchHHHHHHhCc
Confidence 3678999998 789999999999999999998 356666665553221 1 2333
Q ss_pred c---------cccEEEEEeCCCceEEeee
Q psy7938 243 T---------SFPTLKLYAKDDNRVIDYN 262 (305)
Q Consensus 243 ~---------~~Ptl~~f~~g~~~~~~~~ 262 (305)
. ..|++++++++++....+.
T Consensus 154 ~~~~~~~~g~~~p~~~lID~~G~I~~~~~ 182 (200)
T 3zrd_A 154 AITEGPLAGLTARAVVVLDGQDNVIYSEL 182 (200)
T ss_dssp EECSSTTTTSBCCEEEEECTTSBEEEEEE
T ss_pred eeecccCCCccccEEEEECCCCeEEEEEe
Confidence 2 2599999988877544443
No 435
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.68 E-value=9.5e-05 Score=58.58 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=34.0
Q ss_pred CCCcEEEEEE-CCCChhhhh-HHHHHHHHHHHhCCCCce-EEEEEeCC
Q psy7938 189 KSKHVLVEFY-APWCGHCKQ-LAPIYDKLGEKFADRDDI-TIAKIDAT 233 (305)
Q Consensus 189 ~~~~~lv~f~-~~~C~~C~~-~~~~~~~la~~~~~~~~v-~~~~id~~ 233 (305)
.++.++|.|| ++||++|.. ..|.|.++.++++. .++ .++.|..+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~-~gv~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG-KGVDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH-TTCCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 3667888876 999999999 99999999988864 346 66656544
No 436
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.68 E-value=3.7e-05 Score=55.73 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=48.0
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc----c-----ccCCcccccEEEEEeCCCceEEe
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE----L-----EHTKITSFPTLKLYAKDDNRVID 260 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~----~-----~~~~i~~~Ptl~~f~~g~~~~~~ 260 (305)
++..++.|+++||++|+.+.+.+.+++. .+....||....+ . +..++.++|++++ +|++
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~i------~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~~---- 87 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLGV------DFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDEK---- 87 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHTB------CEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTTE----
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcCC------CcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCCE----
Confidence 3445777999999999999999988632 2344444432111 1 1257899999887 3322
Q ss_pred eeCCCCHHHHHHHH
Q psy7938 261 YNGERVLEALSNFV 274 (305)
Q Consensus 261 ~~g~~~~~~l~~fi 274 (305)
+.|..+.+.|.++|
T Consensus 88 ~igg~~~~~l~~~L 101 (103)
T 3nzn_A 88 AIVGFKEKEIRESL 101 (103)
T ss_dssp EEESCCHHHHHHHT
T ss_pred EEEcCCHHHHHHHh
Confidence 34567888888776
No 437
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.67 E-value=6e-05 Score=52.86 Aligned_cols=50 Identities=24% Similarity=0.571 Sum_probs=36.8
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC--ccc-c-ccC-CcccccEEEE
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT--VNE-L-EHT-KITSFPTLKL 250 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~--~~~-~-~~~-~i~~~Ptl~~ 250 (305)
.++.|+++||++|+.+.+.+++.+ +.+..+|.+ ... . +.+ ++.++|++++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~--------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG--------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT--------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC--------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 477899999999999999988763 345566766 222 2 556 8999999853
No 438
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.65 E-value=0.00017 Score=58.34 Aligned_cols=41 Identities=27% Similarity=0.609 Sum_probs=34.2
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEe
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKID 231 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id 231 (305)
..+.+++.|+..||++|..+.+.+.++.+.+.. ++.+..+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p 61 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS--DAYLRTEH 61 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT--TEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC--ceEEEEec
Confidence 356889999999999999999999999998853 56665554
No 439
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.65 E-value=5.3e-05 Score=54.55 Aligned_cols=54 Identities=9% Similarity=0.186 Sum_probs=38.5
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------ccC-CcccccEEEE
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------EHT-KITSFPTLKL 250 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------~~~-~i~~~Ptl~~ 250 (305)
+...-++.|+++||++|+++...|.++. +.+..+|++.+.. ... +..++|++++
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~--------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG--------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT--------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC--------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 4455677899999999999999998763 3345556665432 223 8899998843
No 440
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=0.00035 Score=55.83 Aligned_cols=119 Identities=11% Similarity=0.087 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHcCcccccccCCCCCCccccCCcEEecccChhHHHh-------cCCCcEEEEEECCCChhhhhHHHHH-
Q psy7938 141 VDTVRSFVTEFLAGNLKQHLLSQPLPEDWDKNAVKVLVASNFDEIAF-------DKSKHVLVEFYAPWCGHCKQLAPIY- 212 (305)
Q Consensus 141 ~~~l~~fv~~~~~~~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~v~-------~~~~~~lv~f~~~~C~~C~~~~~~~- 212 (305)
..+..+|+.++...- ....|.. -..+|.+.+. ...|.++|+++++||..|..+....
T Consensus 14 ~~~~~~F~~~f~~~y------g~~~p~F---------~~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~~~~L 78 (178)
T 2ec4_A 14 GDALLQFTAEFSSRY------GDCHPVF---------FIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFCSQML 78 (178)
T ss_dssp HHHHHHHHHHHHHHH------CSCCCCC---------CCSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHh------CCCCCCe---------eeCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHHHHhc
Confidence 457778888764321 1112221 1345666553 3468999999999999999986433
Q ss_pred --HHHHHHhCCCCceEEEEEeCCcccc--------------------ccCCcccccEEEEEeCCC---ceEEeeeCCCCH
Q psy7938 213 --DKLGEKFADRDDITIAKIDATVNEL--------------------EHTKITSFPTLKLYAKDD---NRVIDYNGERVL 267 (305)
Q Consensus 213 --~~la~~~~~~~~v~~~~id~~~~~~--------------------~~~~i~~~Ptl~~f~~g~---~~~~~~~g~~~~ 267 (305)
+++.+-+. .++++...|.+..+. +.+++++||++.++...+ +...+..|..+.
T Consensus 79 ~~~~V~~~l~--~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~ 156 (178)
T 2ec4_A 79 CAESIVSYLS--QNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTV 156 (178)
T ss_dssp TCHHHHHHHH--HTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCH
T ss_pred CCHHHHHHHH--cCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCH
Confidence 44666663 378898889887651 237999999999996442 236779999999
Q ss_pred HHHHHHHHh
Q psy7938 268 EALSNFVES 276 (305)
Q Consensus 268 ~~l~~fi~~ 276 (305)
+.|...|.+
T Consensus 157 ~~ll~~L~~ 165 (178)
T 2ec4_A 157 DELMMRLMA 165 (178)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988877754
No 441
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.64 E-value=4.5e-05 Score=63.10 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=29.9
Q ss_pred CCCeEEEEeec-cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 5 EVPSLRLIRLE-EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 5 ~~p~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
..|.+.+...+ ...+.+. ++. -+.+|+.|||+||++|+ ..|.+.++
T Consensus 34 ~~pdF~l~d~~~G~~v~Ls--d~~-----GKvvll~FwAt~C~~c~-e~p~L~~l 80 (215)
T 2i3y_A 34 TIYDYEAIALNKNEYVSFK--QYV-----GKHILFVNVATYCGLTA-QYPELNAL 80 (215)
T ss_dssp CGGGCEEEBSSSSCEEEGG--GGT-----TSEEEEEEECSSSGGGG-GHHHHHHH
T ss_pred CcCCcEeeeCCCCCEEcHH--HhC-----CCEEEEEEeCCCCCChH-hHHHHHHH
Confidence 46667776666 5666552 221 24678899999999997 44544444
No 442
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.64 E-value=1.5e-05 Score=65.98 Aligned_cols=140 Identities=10% Similarity=0.025 Sum_probs=71.5
Q ss_pred CCCCCeEEEEee--cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccc--c--CCCCCcch
Q psy7938 3 KDEVPSLRLIRL--EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAK--Y--KPASPEIN 73 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~--~--~~~~~~~~ 73 (305)
++..|.+.+... +. ..+.+. ++ .+ -+.+|+.|| ++||++|+...|.+.++...++. + ..-+.. +
T Consensus 24 G~~aP~f~l~~~~~~G~~~~v~l~--d~---~~-gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D-~ 96 (213)
T 2i81_A 24 GKEAPFFKAEAVFGDNSFGEVNLT--QF---IG-KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD-S 96 (213)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGG--GG---TT-TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS-C
T ss_pred CCcCCCeEeeccccCCceeEEeHH--HH---cC-CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC-C
Confidence 456788888876 55 455552 22 01 145788999 99999998766655555333321 0 000000 0
Q ss_pred hhhhhhHHHHHhhcCc--eEEEEEEeCCchhHHHHHHHcCCC---CCCCCeEEEEecCcCce-eccC-CCCCCCHHHHHH
Q psy7938 74 VDTVRSFVTEFLAGNL--KVLFVTINTDEEDHQKILEFFGMS---KDEVPSLRLIRLEEDMA-KYKP-ATPEISVDTVRS 146 (305)
Q Consensus 74 ~~~~~~~~~~~~~~~~--~v~~~~vd~~~~~~~~l~~~~~I~---~~~~Ptl~~~~~~~~~~-~~~~-~~~~~~~~~l~~ 146 (305)
.+....++++..+..+ .+.|-.+ .| ....+++.|||. +..+|++.+++..+.+. .+.. ....++.+++.+
T Consensus 97 ~~~~~~~~~~~~~~~g~~~~~fp~l-~D--~~~~~~~~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~ 173 (213)
T 2i81_A 97 KYTHLAWKKTPLAKGGIGNIKHTLL-SD--ITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILR 173 (213)
T ss_dssp HHHHHHHHSSCGGGTCCCSCSSEEE-EC--TTSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhhCCccCCCceEE-EC--CchHHHHHhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHH
Confidence 1111111111110000 1111111 12 235788999984 11489999998655432 2222 122457888998
Q ss_pred HHHHHH
Q psy7938 147 FVTEFL 152 (305)
Q Consensus 147 fv~~~~ 152 (305)
.+....
T Consensus 174 ~l~~l~ 179 (213)
T 2i81_A 174 IIDAIQ 179 (213)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888765
No 443
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.63 E-value=0.00015 Score=56.20 Aligned_cols=82 Identities=18% Similarity=0.285 Sum_probs=56.6
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC------------------------------------
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA------------------------------------ 232 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~------------------------------------ 232 (305)
+.+.+++.|+.++|++|+++.+.++++ ++-.+.+..+-.
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 467899999999999999999988654 111222221111
Q ss_pred ----Cc----cc--cccCCcccccEEEEEeCCCceEEeeeCCCCHHHHHHHHHhcCCC
Q psy7938 233 ----TV----NE--LEHTKITSFPTLKLYAKDDNRVIDYNGERVLEALSNFVESGGKE 280 (305)
Q Consensus 233 ----~~----~~--~~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~~~l~~fi~~~~~~ 280 (305)
.. +. ...++|+++||+++ .+| . .+.|..+.+.|.++|++....
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG-~---~i~G~~~~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNG-R---TQSGYSPMPQLEEIIRKNQQE 140 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTS-C---EEESCCCTTHHHHHHHHTSCC
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECC-E---EeeCCCCHHHHHHHHHHHHHh
Confidence 00 00 15678999999998 444 3 367999999999999876543
No 444
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=97.63 E-value=1.9e-05 Score=65.69 Aligned_cols=121 Identities=11% Similarity=0.069 Sum_probs=72.0
Q ss_pred CCCCCeEEEEee-cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhh
Q psy7938 3 KDEVPSLRLIRL-EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVR 78 (305)
Q Consensus 3 ~~~~p~i~l~~~-~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (305)
++..|.+.+... +. ..+.+ +++ .+ +.+|+.|| ++||++|+...|.+.++...++.
T Consensus 30 G~~aP~f~l~~~~~~~g~~v~l--~d~----~G-k~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~-------------- 88 (220)
T 1zye_A 30 TQHAPYFKGTAVVSGEFKEISL--DDF----KG-KYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD-------------- 88 (220)
T ss_dssp TSBCCCCEEEEECSSSEEEEEG--GGG----TT-SEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH--------------
T ss_pred CCCCCCcEEEeeeCCCCcEEEH--HHh----CC-CeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH--------------
Confidence 456788887764 22 33333 121 22 56788999 99999998666655555333211
Q ss_pred hHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCCCC----CCCeEEEEecCcC
Q psy7938 79 SFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMSKD----EVPSLRLIRLEED 128 (305)
Q Consensus 79 ~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~~~----~~Ptl~~~~~~~~ 128 (305)
..+.++.|++|.. ....+++.|||... .+|++++++..+.
T Consensus 89 ----------~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~ 158 (220)
T 1zye_A 89 ----------VNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGV 158 (220)
T ss_dssp ----------TTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB
T ss_pred ----------CCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCE
Confidence 1244444444321 13568899998411 6899999986554
Q ss_pred cee-ccC-CCCCCCHHHHHHHHHHHHcC
Q psy7938 129 MAK-YKP-ATPEISVDTVRSFVTEFLAG 154 (305)
Q Consensus 129 ~~~-~~~-~~~~~~~~~l~~fv~~~~~~ 154 (305)
+.. +.+ .....+.+++.+.+......
T Consensus 159 I~~~~~g~~~~~~~~~ell~~l~~l~~~ 186 (220)
T 1zye_A 159 IKHLSVNDLPVGRSVEETLRLVKAFQFV 186 (220)
T ss_dssp EEEEEEECTTCCCCHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 322 222 12346788999999887643
No 445
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.63 E-value=0.0001 Score=50.57 Aligned_cols=67 Identities=15% Similarity=0.322 Sum_probs=44.3
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------ccCCcccccEEEEEeCCCceEEeeeCCCCH
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------EHTKITSFPTLKLYAKDDNRVIDYNGERVL 267 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------~~~~i~~~Ptl~~f~~g~~~~~~~~g~~~~ 267 (305)
++.|+++||++|+.+.+.+.+.. +.+..+|.+.+.. +.+++.++|++++ +| . .+ .| .
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~~--------i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~~--~g-~-~i--~g---~ 65 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSKG--------VSFQELPIDGNAAKREEMIKRSGRTTVPQIFI--DA-Q-HI--GG---Y 65 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHHT--------CCCEEEECTTCSHHHHHHHHHHSSCCSCEEEE--TT-E-EE--ES---H
T ss_pred EEEEECCCChhHHHHHHHHHHCC--------CCcEEEECCCCHHHHHHHHHHhCCCCcCEEEE--CC-E-EE--eC---H
Confidence 56799999999999999888752 3344455554321 4578999999853 44 3 22 22 3
Q ss_pred HHHHHHHHhc
Q psy7938 268 EALSNFVESG 277 (305)
Q Consensus 268 ~~l~~fi~~~ 277 (305)
..|.+++++.
T Consensus 66 ~~i~~~~~~g 75 (82)
T 1fov_A 66 DDLYALDARG 75 (82)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHCC
Confidence 5677776643
No 446
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.61 E-value=0.0007 Score=52.35 Aligned_cols=104 Identities=16% Similarity=0.149 Sum_probs=73.7
Q ss_pred CCcEEecccChhHHHhcCCCcEEEE-EECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeC--Ccccc--ccCCccc--
Q psy7938 172 NAVKVLVASNFDEIAFDKSKHVLVE-FYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDA--TVNEL--EHTKITS-- 244 (305)
Q Consensus 172 ~~v~~l~~~~f~~~v~~~~~~~lv~-f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~--~~~~~--~~~~i~~-- 244 (305)
+.|.+++.++...+. .+..++.++ |....-..-..+.+.+.++|+.++ +++.|+.+|. +.+.. ..+|++.
T Consensus 14 PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fk--gki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 14 PLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFK--GKILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp -CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTT--TTCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred CeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcC--CceEEEEEecchHhHHHHHHHcCCCccc
Confidence 348999999988875 445555444 443333335567899999999996 4789999998 44432 6889885
Q ss_pred ccEEEEEeC-CCceEEeee-CCCCHHHHHHHHHhcC
Q psy7938 245 FPTLKLYAK-DDNRVIDYN-GERVLEALSNFVESGG 278 (305)
Q Consensus 245 ~Ptl~~f~~-g~~~~~~~~-g~~~~~~l~~fi~~~~ 278 (305)
+|+++++.. +...-..+. +..+.+.|.+|+.+..
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHH
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHH
Confidence 999999975 322123433 7889999999999854
No 447
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.61 E-value=1.3e-05 Score=67.59 Aligned_cols=46 Identities=15% Similarity=0.264 Sum_probs=32.0
Q ss_pred hHHHHHHHcCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 102 DHQKILEFFGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 102 ~~~~l~~~~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
.+..+++++||. ++||+++.+.++....+ .|..+.+.|.+++....
T Consensus 187 ~~~~l~~~~gv~--gtPt~vi~~~~G~~~~~---~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 187 DNEKLMDDLGAN--VTPAIYYMSKENTLQQA---VGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHHHHTCC--SSCEEEEEETTTEEEEE---ESSCCHHHHHHHTTC--
T ss_pred HHHHHHHHcCCC--CCCEEEEECCCCCEEEe---cCCCCHHHHHHHHHHHH
Confidence 556789999998 99999998742221223 26678888888877654
No 448
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.61 E-value=3.1e-05 Score=60.71 Aligned_cols=50 Identities=14% Similarity=0.070 Sum_probs=31.4
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeec
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLE 59 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~ 59 (305)
|+..|.+.|...+...+.+. ++. -+.+++.|| +.||++|+...|.+.++.
T Consensus 7 G~~aPdF~l~~~~G~~~~l~--d~~-----Gk~vvl~f~~~~~c~~C~~e~~~l~~~~ 57 (157)
T 4g2e_A 7 GELAPDFELPDTELKKVKLS--ALK-----GKVVVLAFYPAAFTQVCTKEMCTFRDSM 57 (157)
T ss_dssp TSBCCCCEEEBTTSCEEEGG--GGT-----TSCEEEEECSCTTCCC------CCSCGG
T ss_pred CCCCcCeEeECCCCCEEeHH--HHC-----CCeEEEEecCCCCCCccccchhhccccc
Confidence 57789999988877777763 221 245777888 999999987666555553
No 449
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.59 E-value=8.8e-06 Score=59.08 Aligned_cols=55 Identities=13% Similarity=0.129 Sum_probs=37.3
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch-----hHHHHHHHcC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE-----DHQKILEFFG 111 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~~~l~~~~~ 111 (305)
|+.|+++||++|+.+.+++.+.+... +. +..+|.+.. ....+++.+|
T Consensus 14 v~~f~~~~C~~C~~~~~~L~~~~~~~--------------------------~~--~~~vdi~~~~~~~~~~~~l~~~~g 65 (105)
T 1kte_A 14 VVVFIKPTCPFCRKTQELLSQLPFKE--------------------------GL--LEFVDITATSDTNEIQDYLQQLTG 65 (105)
T ss_dssp EEEEECSSCHHHHHHHHHHHHSCBCT--------------------------TS--EEEEEGGGSTTHHHHHHHHHHHHS
T ss_pred EEEEEcCCCHhHHHHHHHHHHcCCCC--------------------------Cc--cEEEEccCCCCHHHHHHHHHHHhC
Confidence 56799999999998888777662221 12 344555521 1246888999
Q ss_pred CCCCCCCeEE
Q psy7938 112 MSKDEVPSLR 121 (305)
Q Consensus 112 I~~~~~Ptl~ 121 (305)
+. ++|++.
T Consensus 66 ~~--~vP~i~ 73 (105)
T 1kte_A 66 AR--TVPRVF 73 (105)
T ss_dssp CC--CSCEEE
T ss_pred CC--CcCeEE
Confidence 97 999973
No 450
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.59 E-value=0.00014 Score=51.58 Aligned_cols=73 Identities=18% Similarity=0.329 Sum_probs=50.5
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc-----c--cCCcccccEEEEEeCCCceEEeeeCCC
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL-----E--HTKITSFPTLKLYAKDDNRVIDYNGER 265 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~-----~--~~~i~~~Ptl~~f~~g~~~~~~~~g~~ 265 (305)
-++.|..+||++|.+.+..|.+. ++.|..+|.+.+.. . ..|.+++|++++ .+| . .. +..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~--------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg-~-~l---~~~ 70 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN--------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADG-S-TL---TNP 70 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT--------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTS-C-EE---ESC
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc--------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCC-E-EE---eCC
Confidence 36779999999999998887663 45556677776543 1 236789999866 434 3 22 235
Q ss_pred CHHHHHHHHHhcCC
Q psy7938 266 VLEALSNFVESGGK 279 (305)
Q Consensus 266 ~~~~l~~fi~~~~~ 279 (305)
+.+.|.++|.+..+
T Consensus 71 ~~~el~~~L~el~g 84 (92)
T 2lqo_A 71 SADEVKAKLVKIAG 84 (92)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhcC
Confidence 77889998887654
No 451
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.58 E-value=0.00056 Score=56.84 Aligned_cols=85 Identities=13% Similarity=0.121 Sum_probs=61.0
Q ss_pred cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc---------------------------------cc
Q psy7938 192 HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE---------------------------------LE 238 (305)
Q Consensus 192 ~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~---------------------------------~~ 238 (305)
.+|++|+++||+.|....+.+.++..+|+. .++.++.|.++... .+
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~-~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~ 112 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAK-RNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAI 112 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHH
Confidence 566667899999999999999999999964 35666666554321 02
Q ss_pred cCCcc------------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 239 HTKIT------------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 239 ~~~i~------------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
.|++. .+|++++++++++....+.| .++.+++.+.|+..
T Consensus 113 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 113 LLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp HTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred HhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 34442 37999999988886555544 45788888887753
No 452
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.56 E-value=6.4e-06 Score=64.76 Aligned_cols=131 Identities=11% Similarity=0.095 Sum_probs=68.0
Q ss_pred CCCCCeEE--EEeeccCceecCCCCCCCChhHHHHHhhhhhc-Ccccccccccceeeeeccccccc----CCCCCcchhh
Q psy7938 3 KDEVPSLR--LIRLEEDMAKYKPATPEINVDTVRSFVTEFLA-GNLKHSKFKKNLYIHLEEDMAKY----KPASPEINVD 75 (305)
Q Consensus 3 ~~~~p~i~--l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a-~wc~~c~~~~p~~~~~~~~~~~~----~~~~~~~~~~ 75 (305)
++..|.+. +...+.+.+.+. ++ . -+..++.||+ +||++|+...|.+.++...++.. ..-+.. +.+
T Consensus 10 G~~~P~f~~~l~~~~G~~~~l~--~~----~-gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-~~~ 81 (163)
T 3gkn_A 10 ELPAATFDLPLSLSGGTQTTLR--AH----A-GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD-SVK 81 (163)
T ss_dssp CCCGGGGGCCEECSTTCEECSG--GG----T-TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS-CHH
T ss_pred CCcCCCccccccCCCCCEEEHH--Hh----C-CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC-CHH
Confidence 55677777 777666555542 21 1 1367888998 99999986665555553333210 000000 122
Q ss_pred hhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCCC------------CCeEEEEecCcCce-eccCCCCCCCHH
Q psy7938 76 TVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKDE------------VPSLRLIRLEEDMA-KYKPATPEISVD 142 (305)
Q Consensus 76 ~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~~------------~Ptl~~~~~~~~~~-~~~~~~~~~~~~ 142 (305)
.+..++.+. +-...++ .| ....+++.||+. . .|+..+++..+.+. .+.........+
T Consensus 82 ~~~~~~~~~---~~~~~~~-~d----~~~~~~~~~~v~--~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~ 151 (163)
T 3gkn_A 82 SHDNFCAKQ---GFAFPLV-SD----GDEALCRAFDVI--KEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHAD 151 (163)
T ss_dssp HHHHHHHHH---CCSSCEE-EC----TTCHHHHHTTCE--EEEEETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHH
T ss_pred HHHHHHHHh---CCCceEE-EC----CcHHHHHHhCCc--cccccccccccCcceEEEEECCCCeEEEEEcCCCcccCHH
Confidence 233333222 1112121 22 224688889986 4 89999998765533 332212223445
Q ss_pred HHHHHHHHH
Q psy7938 143 TVRSFVTEF 151 (305)
Q Consensus 143 ~l~~fv~~~ 151 (305)
++.+.+...
T Consensus 152 ~il~~l~~l 160 (163)
T 3gkn_A 152 AVLAALKAH 160 (163)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666666554
No 453
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.56 E-value=1.3e-05 Score=66.75 Aligned_cols=118 Identities=13% Similarity=0.089 Sum_probs=68.7
Q ss_pred CCCCCeEEEEee-cc--CceecCCCCCCCChhHHHHHhhhhhc-CcccccccccceeeeecccccccCCCCCcchhhhhh
Q psy7938 3 KDEVPSLRLIRL-EE--DMAKYKPATPEINVDTVRSFVTEFLA-GNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVR 78 (305)
Q Consensus 3 ~~~~p~i~l~~~-~~--~~~~~~~~~~~~~~~~~~~~iv~f~a-~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (305)
++..|.+.+... +. +.+.+ +++ . -+.+|+.||+ .||++|+...|.+.++...++.
T Consensus 43 G~~aP~f~l~~~~d~~G~~v~l--~~~----~-Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~-------------- 101 (222)
T 3ztl_A 43 NRPAPEFKGQAVINGEFKEICL--KDY----R-GKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNS-------------- 101 (222)
T ss_dssp SEECCCCEEEEEETTEEEEEEG--GGG----T-TSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHT--------------
T ss_pred CCCCCCeEEecccCCCCcEEeH--HHh----C-CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHH--------------
Confidence 445788888765 44 44444 222 1 2468889997 9999998766655555333211
Q ss_pred hHHHHHhhcCceEEEEEEeCCch--------------------------hHHHHHHHcCCCCC----CCCeEEEEecCcC
Q psy7938 79 SFVTEFLAGNLKVLFVTINTDEE--------------------------DHQKILEFFGMSKD----EVPSLRLIRLEED 128 (305)
Q Consensus 79 ~~~~~~~~~~~~v~~~~vd~~~~--------------------------~~~~l~~~~~I~~~----~~Ptl~~~~~~~~ 128 (305)
..+.|+.|++|.. ....+++.|||... .+|+.++++..+.
T Consensus 102 ----------~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~ 171 (222)
T 3ztl_A 102 ----------RNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGI 171 (222)
T ss_dssp ----------TTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSE
T ss_pred ----------CCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCe
Confidence 1244444544421 12467888998511 5799999986554
Q ss_pred c-eeccCC-CCCCCHHHHHHHHHHH
Q psy7938 129 M-AKYKPA-TPEISVDTVRSFVTEF 151 (305)
Q Consensus 129 ~-~~~~~~-~~~~~~~~l~~fv~~~ 151 (305)
+ ..+... ......+++.+.+...
T Consensus 172 I~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 172 LRQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp EEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHh
Confidence 3 222221 2234567777777654
No 454
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.56 E-value=6.1e-06 Score=61.15 Aligned_cols=55 Identities=13% Similarity=0.083 Sum_probs=38.4
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch-----hHHHHHHHcC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE-----DHQKILEFFG 111 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-----~~~~l~~~~~ 111 (305)
|+.|+++||++|+.+.+++.+.+... ++ |..+|++.. ....+++.+|
T Consensus 21 vv~f~~~~Cp~C~~~~~~L~~~~~~~--------------------------~~--~~~vdi~~~~~~~~~~~~l~~~~g 72 (114)
T 2hze_A 21 VTIFVKYTCPFCRNALDILNKFSFKR--------------------------GA--YEIVDIKEFKPENELRDYFEQITG 72 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHTTSCBCT--------------------------TS--EEEEEGGGSSSHHHHHHHHHHHHS
T ss_pred EEEEEeCCChhHHHHHHHHHHcCCCc--------------------------Cc--eEEEEccCCCChHHHHHHHHHHhC
Confidence 66799999999998887776652110 22 566676622 1247889999
Q ss_pred CCCCCCCeEE
Q psy7938 112 MSKDEVPSLR 121 (305)
Q Consensus 112 I~~~~~Ptl~ 121 (305)
+. ++|++.
T Consensus 73 ~~--~vP~v~ 80 (114)
T 2hze_A 73 GK--TVPRIF 80 (114)
T ss_dssp CC--SSCEEE
T ss_pred CC--CcCEEE
Confidence 98 999874
No 455
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.55 E-value=2.8e-05 Score=63.14 Aligned_cols=30 Identities=17% Similarity=0.069 Sum_probs=23.6
Q ss_pred HHHHhhhhhcCcccccccccceeeeecccc
Q psy7938 33 VRSFVTEFLAGNLKHSKFKKNLYIHLEEDM 62 (305)
Q Consensus 33 ~~~~iv~f~a~wc~~c~~~~p~~~~~~~~~ 62 (305)
-+..|+.|+++||++|+.+.|.+.++...+
T Consensus 25 ~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (195)
T 3hd5_A 25 GKIEVLEFFAYTCPHCAAIEPMVEDWAKTA 54 (195)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEEECCCCccHHHhhHHHHHHHHHC
Confidence 355788999999999998888777665443
No 456
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.54 E-value=0.00014 Score=58.90 Aligned_cols=43 Identities=21% Similarity=0.541 Sum_probs=37.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT 233 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~ 233 (305)
.++.+++.|+++||++|+.+.|.+.++.+.+.+ ++.+..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ--DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT--TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC--CeEEEEEecc
Confidence 467899999999999999999999999999864 6888888765
No 457
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.54 E-value=3.2e-05 Score=57.61 Aligned_cols=54 Identities=15% Similarity=0.330 Sum_probs=38.0
Q ss_pred EEEEECCCChhhhhH-HHHHHHHHHHhCCCCceEEEEEeCCccc--------c-ccCCcccccEEEEEeCC
Q psy7938 194 LVEFYAPWCGHCKQL-APIYDKLGEKFADRDDITIAKIDATVNE--------L-EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 194 lv~f~~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~id~~~~~--------~-~~~~i~~~Ptl~~f~~g 254 (305)
++.|+++||++|+.+ .+.+.+++. ..+.+..+|++.+. . +.+++.++|++ |.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~-----~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g 90 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV-----PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YING 90 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC-----CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETT
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC-----CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECC
Confidence 666999999999998 777766531 23556666666542 2 56789999987 3455
No 458
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.53 E-value=1.9e-05 Score=61.86 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=30.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHH----HHhhhhh-cCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVR----SFVTEFL-AGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~----~~iv~f~-a~wc~~c~~~~p~~~~~ 58 (305)
++..|.+.+...+...+.+ ..++ .+|+.|| +.||++|+...|.+.++
T Consensus 10 G~~~P~f~l~~~~G~~v~l---------~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~ 61 (159)
T 2a4v_A 10 GDPIPDLSLLNEDNDSISL---------KKITENNRVVVFFVYPRASTPGSTRQASGFRDN 61 (159)
T ss_dssp TCBCCSCEEECTTSCEEEH---------HHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred CCCCCCeEEECCCCCEEeH---------HHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 4567777776665555555 3332 3566776 99999998665555444
No 459
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.51 E-value=0.00037 Score=55.26 Aligned_cols=30 Identities=17% Similarity=0.295 Sum_probs=27.2
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHh
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKF 219 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~ 219 (305)
.+.+++.|+..+|++|+.+.+.+.++.+.+
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 556899999999999999999999988887
No 460
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.48 E-value=0.00028 Score=58.54 Aligned_cols=85 Identities=13% Similarity=0.110 Sum_probs=60.3
Q ss_pred cEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc------------------------------cccCC
Q psy7938 192 HVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE------------------------------LEHTK 241 (305)
Q Consensus 192 ~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~------------------------------~~~~~ 241 (305)
.+|++|+++||+.|....+.+.++..+|+. .++.++.|.++... .+.|+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~-~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~yg 112 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLK-LNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLK 112 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHT
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhC
Confidence 455556899999999999999999999964 35667666655321 02234
Q ss_pred cc------------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 242 IT------------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 242 i~------------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
+. .+|+++++.++++....+.| .++.++|.+.|+..
T Consensus 113 v~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 113 IMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp CEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 42 37999999988876444433 46788888887753
No 461
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.47 E-value=0.00044 Score=57.84 Aligned_cols=86 Identities=6% Similarity=-0.011 Sum_probs=61.7
Q ss_pred CcEEEEEE-CCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-------------------------------cc
Q psy7938 191 KHVLVEFY-APWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-------------------------------LE 238 (305)
Q Consensus 191 ~~~lv~f~-~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-------------------------------~~ 238 (305)
+.++++|| ++||+.|....+.+.++..+|+. .++.++.|.++... .+
T Consensus 30 ~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~-~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 30 SWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK-RGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH-TTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 37888888 99999999999999999999864 35666666554321 02
Q ss_pred cCCcc------------cccEEEEEeCCCceEEeeeC----CCCHHHHHHHHHhc
Q psy7938 239 HTKIT------------SFPTLKLYAKDDNRVIDYNG----ERVLEALSNFVESG 277 (305)
Q Consensus 239 ~~~i~------------~~Ptl~~f~~g~~~~~~~~g----~~~~~~l~~fi~~~ 277 (305)
.|++. .+|++++++++++....+.| .++.++|.+.|...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 34443 47999999988876444433 45788888888753
No 462
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.47 E-value=0.00017 Score=58.44 Aligned_cols=43 Identities=28% Similarity=0.642 Sum_probs=37.8
Q ss_pred CCCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC
Q psy7938 189 KSKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT 233 (305)
Q Consensus 189 ~~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~ 233 (305)
+++.++|.|++.||++|+.+.|.+.++.+.+.+ ++.|..+...
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~--~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD--DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT--TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC--CeEEEEecCC
Confidence 467899999999999999999999999988864 6888888765
No 463
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.47 E-value=1.9e-05 Score=55.49 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=37.8
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHc-CCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFF-GMSKD 115 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~-~I~~~ 115 (305)
++.|+++||++|+...+++.+. .+.|..+|.+......+.+.+ |+.
T Consensus 8 v~~y~~~~C~~C~~~~~~L~~~-------------------------------~i~~~~vdv~~~~~~~l~~~~~~~~-- 54 (89)
T 2klx_A 8 IILYTRPNCPYCKRARDLLDKK-------------------------------GVKYTDIDASTSLRQEMVQRANGRN-- 54 (89)
T ss_dssp EEEESCSCCTTTHHHHHHHHHH-------------------------------TCCEEEECSCHHHHHHHHHHHHSSC--
T ss_pred EEEEECCCChhHHHHHHHHHHc-------------------------------CCCcEEEECCHHHHHHHHHHhCCCC--
Confidence 5578999999998776555443 145667777633456788889 997
Q ss_pred CCCeEE
Q psy7938 116 EVPSLR 121 (305)
Q Consensus 116 ~~Ptl~ 121 (305)
++|++.
T Consensus 55 ~vP~l~ 60 (89)
T 2klx_A 55 TFPQIF 60 (89)
T ss_dssp CSCEEE
T ss_pred CcCEEE
Confidence 999984
No 464
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.46 E-value=0.00044 Score=55.70 Aligned_cols=40 Identities=23% Similarity=0.463 Sum_probs=32.9
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEe
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKID 231 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id 231 (305)
.+.+++.|+..+|++|..+.+.+.++.+.+.. ++.+..+.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--~v~~~~~p 64 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK--DVRFTLVP 64 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT--TEEEEEEE
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCC--ceEEEEeC
Confidence 56689999999999999999999999988853 56665444
No 465
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.45 E-value=0.00012 Score=53.11 Aligned_cols=58 Identities=21% Similarity=0.405 Sum_probs=39.1
Q ss_pred ChhHHHhcCCCcEEEEEEC-----CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------ccCCcccccEEE
Q psy7938 181 NFDEIAFDKSKHVLVEFYA-----PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------EHTKITSFPTLK 249 (305)
Q Consensus 181 ~f~~~v~~~~~~~lv~f~~-----~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------~~~~i~~~Ptl~ 249 (305)
.+.+++. ...++| |+. +||++|+.+.+.+.++. +.+..+|++.+.. ..+++.++|+++
T Consensus 9 ~~~~~i~--~~~vvv-f~~g~~~~~~C~~C~~~~~~L~~~~--------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~ 77 (105)
T 2yan_A 9 RLKVLTN--KASVML-FMKGNKQEAKCGFSKQILEILNSTG--------VEYETFDILEDEEVRQGLKAYSNWPTYPQLY 77 (105)
T ss_dssp HHHHHHT--SSSEEE-EESBCSSSBCTTHHHHHHHHHHHHT--------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE
T ss_pred HHHHHhc--cCCEEE-EEecCCCCCCCccHHHHHHHHHHCC--------CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE
Confidence 3444442 234444 777 99999999999998863 3455667665532 346789999984
No 466
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.44 E-value=9.7e-05 Score=60.72 Aligned_cols=46 Identities=9% Similarity=-0.038 Sum_probs=29.5
Q ss_pred CCCeEEEEeec-cCceecCCCCCCCChhHHHHHhhhhhcCcccccccccceeeee
Q psy7938 5 EVPSLRLIRLE-EDMAKYKPATPEINVDTVRSFVTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 5 ~~p~i~l~~~~-~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
..|.+.+...+ ...+.+. ++. -+.+|+.|||+||++| ...|.+.++
T Consensus 16 ~~pdF~l~d~~~G~~v~Ls--~~k-----GKvvll~F~At~C~~c-~e~p~L~~l 62 (207)
T 2r37_A 16 TIYEYGALTIDGEEYIPFK--QYA-----GKYVLFVNVASYGGLT-GQYIELNAL 62 (207)
T ss_dssp CGGGCEEEBTTSSCEEEGG--GGT-----TSEEEEEEECSSSTTT-THHHHHHHH
T ss_pred ccCCeEeeeCCCCCEEcHH--HhC-----CCEEEEEEeCCCCCCh-HHHHHHHHH
Confidence 46677776666 5666552 221 2467889999999999 344444444
No 467
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.40 E-value=8.5e-05 Score=58.91 Aligned_cols=141 Identities=9% Similarity=0.073 Sum_probs=80.9
Q ss_pred CCCCC-eEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCccc-ccccccceeeeecccccc----c----CCCCCcc
Q psy7938 3 KDEVP-SLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLK-HSKFKKNLYIHLEEDMAK----Y----KPASPEI 72 (305)
Q Consensus 3 ~~~~p-~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~-~c~~~~p~~~~~~~~~~~----~----~~~~~~~ 72 (305)
++..| .+.+...+.+.+.+. ++. -+.+++.||++||+ .|....|.+.++...++. + ......-
T Consensus 4 G~~~P~~f~l~d~~G~~v~l~--~~~-----Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d 76 (170)
T 3me7_A 4 GTYVPGDITLVDSYGNEFQLK--NLK-----GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKD 76 (170)
T ss_dssp TCBCCTTCEEEETTCCEEEGG--GGT-----TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTC
T ss_pred CCcCCCCeEEEcCCcCEEchH--HhC-----CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCC
Confidence 56788 889888877777663 221 25678899999997 597655554444333311 1 0000122
Q ss_pred hhhhhhhHHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCC-------CCCCeEEEEecCcCce-eccCCCCCCCHHHH
Q psy7938 73 NVDTVRSFVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSK-------DEVPSLRLIRLEEDMA-KYKPATPEISVDTV 144 (305)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~-------~~~Ptl~~~~~~~~~~-~~~~~~~~~~~~~l 144 (305)
+.+.+..++.+.........|+... +..+...+++.||+.. ...|++.+++..+.+. .+.+ ...+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~w~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g--~~~~~~~i 153 (170)
T 3me7_A 77 TLEDIKRFQKEYGIDGKGWKVVKAK-TSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYG--VNYNYLEF 153 (170)
T ss_dssp CHHHHHHHHHHTTCCSSSEEEEEES-SHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEES--SSCCHHHH
T ss_pred CHHHHHHHHHHcCCCCCCeEEEeCC-CHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeC--CCCCHHHH
Confidence 3344444444432111223333322 2235678899888631 2558889998766544 3332 24678999
Q ss_pred HHHHHHHHc
Q psy7938 145 RSFVTEFLA 153 (305)
Q Consensus 145 ~~fv~~~~~ 153 (305)
++.+.+...
T Consensus 154 ~~~l~~~~~ 162 (170)
T 3me7_A 154 VNALRLARG 162 (170)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHhhc
Confidence 999888754
No 468
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.36 E-value=0.00016 Score=50.90 Aligned_cols=52 Identities=17% Similarity=0.357 Sum_probs=37.0
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------ccCCcccccEEEEEeCC
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------~~~~i~~~Ptl~~f~~g 254 (305)
.++.|+++||++|+.+.+.+.+. ++.+..+|.+.+.. +.+++.++|+++ .+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~--------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l~--~~g 64 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK--------GAEFNEIDASATPELRAEMQERSGRNTFPQIF--IGS 64 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT--------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEEE--ETT
T ss_pred cEEEEECCCChhHHHHHHHHHHc--------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECC
Confidence 47789999999999999888764 23445566665432 357889999763 355
No 469
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.35 E-value=8e-05 Score=59.23 Aligned_cols=42 Identities=19% Similarity=0.405 Sum_probs=32.7
Q ss_pred CcEEEEEECCCChhhhhH-HHHHHHHHHHhCCCCceE-EEEEeCC
Q psy7938 191 KHVLVEFYAPWCGHCKQL-APIYDKLGEKFADRDDIT-IAKIDAT 233 (305)
Q Consensus 191 ~~~lv~f~~~~C~~C~~~-~~~~~~la~~~~~~~~v~-~~~id~~ 233 (305)
+.++++||++||++|... .|.|.++..+++.. ++. ++.|+.+
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~-g~~~vv~Is~d 88 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAK-GVDSVICVAIN 88 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHT-TCSEEEEEESS
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 467888999999999998 99999999988642 344 5555544
No 470
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.34 E-value=1.1e-05 Score=66.02 Aligned_cols=41 Identities=12% Similarity=-0.006 Sum_probs=33.6
Q ss_pred HHHhhhhhcCccccccccccee---eeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCC
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLY---IHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTD 99 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~ 99 (305)
...|++||+.||+||+.+.|.+ .++. +.+.++|.|.+++.+
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~-------------------------~~~~~~v~~~~~~v~ 157 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVK-------------------------KKLPEGVKMTKYHVN 157 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHT-------------------------TSSCTTCCEEEEECS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHH-------------------------HHCCCCCEEEEeccC
Confidence 4688899999999999999998 6662 333467889999987
No 471
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.32 E-value=2.1e-05 Score=59.73 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=35.5
Q ss_pred hhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch-h----HHHHHHHcCC
Q psy7938 38 TEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE-D----HQKILEFFGM 112 (305)
Q Consensus 38 v~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~----~~~l~~~~~I 112 (305)
+-|+++||++|+.+.+++.+. + +.|..+|++.. + ...|++.+|+
T Consensus 30 vvf~~~~Cp~C~~~~~~L~~~------------------------------~-i~~~~vdid~~~~~~~~~~~l~~~~g~ 78 (130)
T 2cq9_A 30 VIFSKTSCSYCTMAKKLFHDM------------------------------N-VNYKVVELDLLEYGNQFQDALYKMTGE 78 (130)
T ss_dssp EEEECSSCSHHHHHHHHHHHH------------------------------T-CCCEEEETTTSTTHHHHHHHHHHHHSS
T ss_pred EEEEcCCChHHHHHHHHHHHc------------------------------C-CCcEEEECcCCcCcHHHHHHHHHHhCC
Confidence 349999999999887666555 1 33455666632 1 1248889999
Q ss_pred CCCCCCeEE
Q psy7938 113 SKDEVPSLR 121 (305)
Q Consensus 113 ~~~~~Ptl~ 121 (305)
. ++|++.
T Consensus 79 ~--~vP~l~ 85 (130)
T 2cq9_A 79 R--TVPRIF 85 (130)
T ss_dssp C--CSSEEE
T ss_pred C--CcCEEE
Confidence 8 999984
No 472
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.27 E-value=0.00026 Score=51.95 Aligned_cols=53 Identities=19% Similarity=0.480 Sum_probs=34.9
Q ss_pred EEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCC---ccc----c-ccCCcccccEEEEEeCC
Q psy7938 194 LVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDAT---VNE----L-EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 194 lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~---~~~----~-~~~~i~~~Ptl~~f~~g 254 (305)
++.|+++||++|+.+.+.|.+++. .+....+|.. ... . ...+..++|+++ -+|
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~~i------~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if--i~g 81 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRLGV------QPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF--VCG 81 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHTTC------CCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE--ETT
T ss_pred EEEEECCCChhHHHHHHHHHHcCC------CCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE--ECC
Confidence 677999999999999999987522 2334444332 111 1 235889999994 355
No 473
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.27 E-value=7.4e-05 Score=62.11 Aligned_cols=139 Identities=9% Similarity=-0.003 Sum_probs=75.1
Q ss_pred CCCCCeEEEEee--cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccc----cCCCCCcch
Q psy7938 3 KDEVPSLRLIRL--EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAK----YKPASPEIN 73 (305)
Q Consensus 3 ~~~~p~i~l~~~--~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~----~~~~~~~~~ 73 (305)
++..|.+.+... +. ..+.+. ++ .+ -+.+|+.|| +.||++|+...|.+.++...++. +..-+. -+
T Consensus 28 G~~aP~F~l~~~~~~G~~~~v~L~--d~---~~-Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~-D~ 100 (221)
T 2c0d_A 28 TKKAYNFTAQGLNKNNEIINVDLS--SF---IG-QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISV-DS 100 (221)
T ss_dssp TSBCCCCEEEEECTTSCEEEEEGG--GG---TT-TCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEES-SC
T ss_pred CCCCCCeEEeccccCCCccEEeHH--HH---cC-CCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeC-CC
Confidence 556788888877 55 455552 22 01 146788999 99999998666655555433321 000010 01
Q ss_pred hhhhhhHHHHHhhc----CceEEEEEEeCCchhHHHHHHHcCCC---CCCCCeEEEEecCcCcee-ccC-CCCCCCHHHH
Q psy7938 74 VDTVRSFVTEFLAG----NLKVLFVTINTDEEDHQKILEFFGMS---KDEVPSLRLIRLEEDMAK-YKP-ATPEISVDTV 144 (305)
Q Consensus 74 ~~~~~~~~~~~~~~----~~~v~~~~vd~~~~~~~~l~~~~~I~---~~~~Ptl~~~~~~~~~~~-~~~-~~~~~~~~~l 144 (305)
.+....++.+.... .-.+.++ .|. ...+++.||+. +...|+.++++..+.+.. +.+ .....+.+++
T Consensus 101 ~~~~~~~~~~~~~~~g~~~~~fp~l-~D~----~~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~el 175 (221)
T 2c0d_A 101 VYSHLAWKNMPIEKGGIGNVEFTLV-SDI----NKDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEV 175 (221)
T ss_dssp HHHHHHHHHSCGGGTCCCSCSSEEE-ECT----TSHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHH
T ss_pred HHHHHHHHHHhhhhcCccCCceEEE-ECC----chHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHH
Confidence 12223333322111 1122222 242 35788999982 015899999986655322 221 1124578888
Q ss_pred HHHHHHHHc
Q psy7938 145 RSFVTEFLA 153 (305)
Q Consensus 145 ~~fv~~~~~ 153 (305)
.+.+.....
T Consensus 176 l~~l~~L~~ 184 (221)
T 2c0d_A 176 LRTIDSIIH 184 (221)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 888887653
No 474
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.23 E-value=9.7e-05 Score=59.71 Aligned_cols=29 Identities=14% Similarity=0.046 Sum_probs=22.8
Q ss_pred HHHhhhhhcCcccccccccceeeeecccc
Q psy7938 34 RSFVTEFLAGNLKHSKFKKNLYIHLEEDM 62 (305)
Q Consensus 34 ~~~iv~f~a~wc~~c~~~~p~~~~~~~~~ 62 (305)
...|+.|+.+||++|+.+.|.+.++...+
T Consensus 26 ~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (192)
T 3h93_A 26 KIEVVELFWYGCPHCYAFEPTIVPWSEKL 54 (192)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEECCCChhHHHhhHHHHHHHHhC
Confidence 45688999999999998888776664443
No 475
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.21 E-value=0.00028 Score=51.59 Aligned_cols=63 Identities=21% Similarity=0.414 Sum_probs=41.7
Q ss_pred cChhHHHhcCCCcEEEEEEC-----CCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCcccc------ccCCcccccEE
Q psy7938 180 SNFDEIAFDKSKHVLVEFYA-----PWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNEL------EHTKITSFPTL 248 (305)
Q Consensus 180 ~~f~~~v~~~~~~~lv~f~~-----~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~~------~~~~i~~~Ptl 248 (305)
+.+++++. ... ++.|+. +||++|+.+...|.++ ++.+..+|++.+.. ...+..++|++
T Consensus 6 ~~~~~~i~--~~~-vvvy~~g~~~~~~Cp~C~~ak~~L~~~--------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i 74 (109)
T 1wik_A 6 SGLKVLTN--KAS-VMLFMKGNKQEAKCGFSKQILEILNST--------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL 74 (109)
T ss_dssp CCHHHHHT--TSS-EEEEESSTTTCCCSSTHHHHHHHHHHT--------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE
T ss_pred HHHHHHhc--cCC-EEEEEecCCCCCCCchHHHHHHHHHHc--------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE
Confidence 45666662 233 445777 9999999999888765 34566677766542 34567889985
Q ss_pred EEEeCCC
Q psy7938 249 KLYAKDD 255 (305)
Q Consensus 249 ~~f~~g~ 255 (305)
|.+|.
T Consensus 75 --fi~g~ 79 (109)
T 1wik_A 75 --YVRGD 79 (109)
T ss_dssp --ECSSS
T ss_pred --EECCE
Confidence 44554
No 476
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.21 E-value=2.3e-05 Score=55.39 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=46.1
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCC--ch-hH----HHHHHH
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTD--EE-DH----QKILEF 109 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~--~~-~~----~~l~~~ 109 (305)
|+-|+++||++|+...+++.+.+ +.+-.+|.+ +. +. .++.+.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g-------------------------------i~~~~~~v~~~~~~~~~~~~~~l~~~ 62 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG-------------------------------VDFEVIWIDKLEGEERKKVIEKVHSI 62 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT-------------------------------CCCEEEEGGGCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHcC-------------------------------CCcEEEEeeeCCccchHHHHHHHHHh
Confidence 55688999999987765555541 223333433 11 22 667788
Q ss_pred cCCCCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHH
Q psy7938 110 FGMSKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVT 149 (305)
Q Consensus 110 ~~I~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~ 149 (305)
+|+. ++|++.+ .| ... +..+.+.|.+++.
T Consensus 63 ~g~~--~vP~l~~--~g---~~i----~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 63 SGSY--SVPVVVK--GD---KHV----LGYNEEKLKELIR 91 (92)
T ss_dssp HSSS--CSCEEEE--TT---EEE----ESCCHHHHHHHHH
T ss_pred cCCC--CcCEEEE--CC---EEE----eCCCHHHHHHHhc
Confidence 9987 9999876 33 223 3568888888864
No 477
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=97.18 E-value=0.0004 Score=55.90 Aligned_cols=44 Identities=20% Similarity=0.259 Sum_probs=32.3
Q ss_pred CC-cEEEEEECCCChhhhh-HHHHHHHHHHHhCCCCceE-EEEEeCCc
Q psy7938 190 SK-HVLVEFYAPWCGHCKQ-LAPIYDKLGEKFADRDDIT-IAKIDATV 234 (305)
Q Consensus 190 ~~-~~lv~f~~~~C~~C~~-~~~~~~~la~~~~~~~~v~-~~~id~~~ 234 (305)
++ .+|++||++||+.|.. ..|.|.+++++++.. ++. ++.|..+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~-gv~~vv~Is~d~ 102 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILAR-GVDDIAVVAVND 102 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTT-TCCEEEEEESSC
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 55 4555667999999999 799999999999653 344 55555443
No 478
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.17 E-value=9.5e-05 Score=58.25 Aligned_cols=112 Identities=8% Similarity=0.043 Sum_probs=56.9
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccccCCCCCcchhhhhhhHH
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFV 81 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (305)
++..|.+.+...+...+.+. ++ . -+..|+.|| +.||++|+...|.+.++...+..+.-.. .+.|+.. .+
T Consensus 20 G~~~P~f~l~~~~G~~v~l~--~~----~-gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~--Is~d~~~-~~ 89 (165)
T 1q98_A 20 GEIVENFILVGNDLADVALN--DF----A-SKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLC--ISADLPF-AQ 89 (165)
T ss_dssp TCBCCCCEEECTTSCEEEGG--GG----T-TSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEE--EESSCHH-HH
T ss_pred CCCCCCeEEECCCCCEEehH--Hh----C-CCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEE--EeCCCHH-HH
Confidence 45578888877666666552 21 1 135778898 8999999766554444322221100000 0111111 11
Q ss_pred HHH-hhcCc-eEEEEEEeCCchhHHHHHHHcCCCCC-------CCCeEEEEecCcC
Q psy7938 82 TEF-LAGNL-KVLFVTINTDEEDHQKILEFFGMSKD-------EVPSLRLIRLEED 128 (305)
Q Consensus 82 ~~~-~~~~~-~v~~~~vd~~~~~~~~l~~~~~I~~~-------~~Ptl~~~~~~~~ 128 (305)
.++ .+++- .+.++. |. ....+++.||+... ..|+..+++..+.
T Consensus 90 ~~~~~~~~~~~~~~l~-D~---~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~ 141 (165)
T 1q98_A 90 ARFCGAEGIENAKTVS-TF---RNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNN 141 (165)
T ss_dssp TTCTTTTTCTTEEEEE-CT---TCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSB
T ss_pred HHHHHHcCCCceEEee-cc---ccchHHHHhCceecccccCCccceeEEEEcCCCE
Confidence 111 11112 233332 43 12578899998521 1499999986554
No 479
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.12 E-value=3.2e-05 Score=57.59 Aligned_cols=54 Identities=11% Similarity=0.167 Sum_probs=37.5
Q ss_pred hhhhhcCcccccccc-cceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCchh-----HHHHHHHc
Q psy7938 37 VTEFLAGNLKHSKFK-KNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEED-----HQKILEFF 110 (305)
Q Consensus 37 iv~f~a~wc~~c~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-----~~~l~~~~ 110 (305)
|+.|+++||++|+.. .+++.+.+. ..+.|..+|.+... ...|++.+
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~----------------------------~~i~~~~vdid~~~~~~~~~~~l~~~~ 78 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV----------------------------PRSKVLVLQLNDMKEGADIQAALYEIN 78 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC----------------------------CGGGEEEEEGGGSTTHHHHHHHHHHHH
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC----------------------------CCCCeEEEECccCCChHHHHHHHHHHh
Confidence 445999999999987 766665521 12446666766322 24688899
Q ss_pred CCCCCCCCeE
Q psy7938 111 GMSKDEVPSL 120 (305)
Q Consensus 111 ~I~~~~~Ptl 120 (305)
|+. ++|++
T Consensus 79 g~~--tvP~v 86 (118)
T 3c1r_A 79 GQR--TVPNI 86 (118)
T ss_dssp SCC--SSCEE
T ss_pred CCC--CcCEE
Confidence 997 99987
No 480
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.12 E-value=3.3e-05 Score=59.83 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=34.7
Q ss_pred hhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch-h----HHHHHHHcCCC
Q psy7938 39 EFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE-D----HQKILEFFGMS 113 (305)
Q Consensus 39 ~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~-~----~~~l~~~~~I~ 113 (305)
-|+++||++|+.+.+++.+.+ +.|..+|++.. + ...|++.+|+.
T Consensus 53 vf~~~~Cp~C~~~k~~L~~~~-------------------------------i~~~~vdId~~~~~~~~~~~L~~~~g~~ 101 (146)
T 2ht9_A 53 IFSKTSCSYCTMAKKLFHDMN-------------------------------VNYKVVELDLLEYGNQFQDALYKMTGER 101 (146)
T ss_dssp EEECTTCHHHHHHHHHHHHHT-------------------------------CCCEEEEGGGCTTHHHHHHHHHHHHSCC
T ss_pred EEECCCChhHHHHHHHHHHcC-------------------------------CCeEEEECccCcCCHHHHHHHHHHhCCC
Confidence 499999999998877666551 23445565522 1 12488899998
Q ss_pred CCCCCeEE
Q psy7938 114 KDEVPSLR 121 (305)
Q Consensus 114 ~~~~Ptl~ 121 (305)
++|++.
T Consensus 102 --tvP~if 107 (146)
T 2ht9_A 102 --TVPRIF 107 (146)
T ss_dssp --CSCEEE
T ss_pred --CcCeEE
Confidence 999984
No 481
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.08 E-value=0.00059 Score=47.33 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=46.0
Q ss_pred EEEEEECCCChhhhhHHHHHHHHHHHhCCCCceEEEEEeCCccc-----c-ccCCc-----ccccEEEEEeCCCceEEee
Q psy7938 193 VLVEFYAPWCGHCKQLAPIYDKLGEKFADRDDITIAKIDATVNE-----L-EHTKI-----TSFPTLKLYAKDDNRVIDY 261 (305)
Q Consensus 193 ~lv~f~~~~C~~C~~~~~~~~~la~~~~~~~~v~~~~id~~~~~-----~-~~~~i-----~~~Ptl~~f~~g~~~~~~~ 261 (305)
.++.|+++||++|+.+...+.++. -.+.+..+|...+. . +..+. .++|++++ +| + .+
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~------i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g-~-~i-- 72 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN------IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DD-E-HI-- 72 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT------CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TT-E-EE--
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC------CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CC-E-EE--
Confidence 477899999999999998887653 24566666665441 2 44566 89999965 44 2 22
Q ss_pred eCCCCHHHHHHHHHhc
Q psy7938 262 NGERVLEALSNFVESG 277 (305)
Q Consensus 262 ~g~~~~~~l~~fi~~~ 277 (305)
. ....+.+++.+.
T Consensus 73 ~---g~~~i~~~~~~~ 85 (89)
T 3msz_A 73 G---GFTELKANADKI 85 (89)
T ss_dssp E---SHHHHHHTHHHH
T ss_pred e---ChHHHHHHHHHH
Confidence 2 345666666553
No 482
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.01 E-value=0.00019 Score=59.12 Aligned_cols=139 Identities=12% Similarity=-0.022 Sum_probs=72.5
Q ss_pred CCCCCeEEEEee-cc--CceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccc----cCCCCCcchh
Q psy7938 3 KDEVPSLRLIRL-EE--DMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAK----YKPASPEINV 74 (305)
Q Consensus 3 ~~~~p~i~l~~~-~~--~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~----~~~~~~~~~~ 74 (305)
++..|.+.+... +. ..+.+. ++ . -+.+|+.|| ++||++|+...|.+.++...++. +..-+. -+.
T Consensus 22 G~~aP~f~l~~~~~~~g~~v~l~--d~----~-Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~-D~~ 93 (211)
T 2pn8_A 22 SMPAPYWEGTAVIDGEFKELKLT--DY----R-GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSV-DSQ 93 (211)
T ss_dssp SCBCCCCEEEEEETTEEEEEEGG--GG----T-TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEES-SCH
T ss_pred CCcCCCeEeecccCCCCcEEEHH--Hh----C-CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC-CCH
Confidence 456788888764 33 344442 22 1 145788999 99999997665555554333321 000000 011
Q ss_pred hhhhhHHHHHhhcCc--eEEEE-EEeCCchhHHHHHHHcCCCC----CCCCeEEEEecCcCcee-ccCC-CCCCCHHHHH
Q psy7938 75 DTVRSFVTEFLAGNL--KVLFV-TINTDEEDHQKILEFFGMSK----DEVPSLRLIRLEEDMAK-YKPA-TPEISVDTVR 145 (305)
Q Consensus 75 ~~~~~~~~~~~~~~~--~v~~~-~vd~~~~~~~~l~~~~~I~~----~~~Ptl~~~~~~~~~~~-~~~~-~~~~~~~~l~ 145 (305)
+....++++..+..+ .+.|- ..|. ...+++.||+.. ...|+..+++..+.+.. +.+. ....+.+++.
T Consensus 94 ~~~~~~~~~~~~~~g~~~~~fp~l~D~----~~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell 169 (211)
T 2pn8_A 94 FTHLAWINTPRRQGGLGPIRIPLLSDL----THQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETL 169 (211)
T ss_dssp HHHHHHHTSCGGGTCCCSCSSCEEECT----TSHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHH
T ss_pred HHHHHHHHHhhhccCccCCceEEEECC----chHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHH
Confidence 122222222211111 22221 1243 257889999831 14899999987655332 2111 1235778888
Q ss_pred HHHHHHHc
Q psy7938 146 SFVTEFLA 153 (305)
Q Consensus 146 ~fv~~~~~ 153 (305)
+.+.....
T Consensus 170 ~~l~~l~~ 177 (211)
T 2pn8_A 170 RLVQAFQY 177 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 88887653
No 483
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.00 E-value=0.001 Score=52.87 Aligned_cols=34 Identities=15% Similarity=0.256 Sum_probs=26.6
Q ss_pred CCCcEEE-EEECCCChhhh-hHHHHHHHHHHHhCCC
Q psy7938 189 KSKHVLV-EFYAPWCGHCK-QLAPIYDKLGEKFADR 222 (305)
Q Consensus 189 ~~~~~lv-~f~~~~C~~C~-~~~~~~~~la~~~~~~ 222 (305)
.++.++| +|+++||+.|. ...|.|.+++.+|+..
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~ 77 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAK 77 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 3565554 55599999999 5899999999999653
No 484
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.00 E-value=0.00022 Score=58.15 Aligned_cols=49 Identities=8% Similarity=0.028 Sum_probs=31.6
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~ 58 (305)
++..|.+.+...+...+.+. ++. -+.+++.|| +.||++|+...|.+.++
T Consensus 55 G~~aPdf~l~d~~G~~v~L~--d~~-----Gk~vvl~F~~~~~c~~C~~e~~~l~~l 104 (200)
T 3zrd_A 55 GDKAKDFTLVAKDLSDVALS--SFA-----GKRKVLNIFPSIDTGVCAASVRKFNQL 104 (200)
T ss_dssp TCBCCCCEEECTTSCEEEGG--GGT-----TSEEEEEECSCCCCSCCCHHHHHHHHH
T ss_pred CCCCCCeEEECCCCCEEcHH--HhC-----CCcEEEEEECCCCCchhHHHHHHHHHH
Confidence 45577777776666666552 221 245678898 78999998665555444
No 485
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.93 E-value=0.00014 Score=57.04 Aligned_cols=49 Identities=6% Similarity=-0.029 Sum_probs=32.1
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhc-Ccccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLA-GNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a-~wc~~c~~~~p~~~~~ 58 (305)
++..|.+.+...+...+.+. ++. -+..|+.||+ .||++|+...|.+.++
T Consensus 19 G~~~P~f~l~~~~G~~v~l~--~~~-----gk~vvl~F~~~~~c~~C~~~~~~l~~~ 68 (163)
T 1psq_A 19 GDKALDFSLTTTDLSKKSLA--DFD-----GKKKVLSVVPSIDTGICSTQTRRFNEE 68 (163)
T ss_dssp TSBCCCCEEECTTSCEEEGG--GGT-----TSEEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEcCCCcEeeHH--HhC-----CCEEEEEEECCCCCCccHHHHHHHHHH
Confidence 45678888877666666552 221 1357888995 9999997655544444
No 486
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.92 E-value=0.00013 Score=57.48 Aligned_cols=132 Identities=6% Similarity=0.001 Sum_probs=70.0
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeeccccccc--CCCCCcchhhhhhh
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAKY--KPASPEINVDTVRS 79 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 79 (305)
++..|.+.+...+.+.+.+. ++. -+..++.|| +.||++|+...|.+.++... ..+ ..-+. -+.+.+..
T Consensus 23 G~~aP~f~l~~~~G~~~~l~--~~~-----Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~-~~~~vv~is~-d~~~~~~~ 93 (166)
T 3p7x_A 23 GDFAPDFTVLDNDLNQVTLA--DYA-----GKKKLISVVPSIDTGVCDQQTRKFNSDASK-EEGIVLTISA-DLPFAQKR 93 (166)
T ss_dssp TSBCCCCEEECTTSCEEEGG--GGT-----TSCEEEEECSCTTSHHHHHHHHHHHHHSCT-TTSEEEEEES-SCHHHHHH
T ss_pred CCCCCCeEEEcCCCCEEeHH--HhC-----CCcEEEEEECCCCCCccHHHHHHHHHHhhc-CCCEEEEEEC-CCHHHHHH
Confidence 45678888877776666662 221 245677888 78999997665555544332 111 00010 11233333
Q ss_pred HHHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCC----CCCeEEEEecCcCceec-cCC--CCCCCHHHHHHHHH
Q psy7938 80 FVTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKD----EVPSLRLIRLEEDMAKY-KPA--TPEISVDTVRSFVT 149 (305)
Q Consensus 80 ~~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~----~~Ptl~~~~~~~~~~~~-~~~--~~~~~~~~l~~fv~ 149 (305)
++.+. ... .+.++. |.. ...++..||+... ..|+..+++..+.+... ... ....+.+++.+.+.
T Consensus 94 ~~~~~-~~~-~~~~l~-D~~---~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~ 164 (166)
T 3p7x_A 94 WCASA-GLD-NVITLS-DHR---DLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYK 164 (166)
T ss_dssp HHHHH-TCS-SCEEEE-CTT---TCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHH
T ss_pred HHHHc-CCC-ceEEcc-CCc---hhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHh
Confidence 33332 111 233332 440 2478899999611 17999999866553322 211 22345566666554
No 487
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.88 E-value=0.00025 Score=56.09 Aligned_cols=49 Identities=6% Similarity=-0.020 Sum_probs=33.4
Q ss_pred CCCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeee
Q psy7938 3 KDEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 3 ~~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~ 58 (305)
++..|.+.+...+...+.+. ++. -+..++.|| +.||++|+...|.+.++
T Consensus 24 g~~~P~f~l~~~~G~~~~l~--~~~-----gk~vvl~f~~~~~C~~C~~~~~~l~~~ 73 (171)
T 2yzh_A 24 GDRAPEAVVVTKDLQEKIVG--GAK-----DVVQVIITVPSLDTPVCETETKKFNEI 73 (171)
T ss_dssp TSBCCCEEEEETTSCEEEES--SCC-----SSEEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred CCcCCceEEECCCCCEeeHH--HhC-----CCeEEEEEECCCCCCchHHHHHHHHHH
Confidence 45688888887777777663 332 135678898 89999997655444444
No 488
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.85 E-value=0.00063 Score=54.87 Aligned_cols=42 Identities=14% Similarity=0.405 Sum_probs=32.2
Q ss_pred CCcEEEEEECCCChhhhhHHHHH---HHHHHHhCCCCceEEEEEeCC
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIY---DKLGEKFADRDDITIAKIDAT 233 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~---~~la~~~~~~~~v~~~~id~~ 233 (305)
.++++|.|++.||++|+.+.|.+ .++.+.+.+ ++.|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ--GSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT--TCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC--CCEEEEEech
Confidence 36789999999999999999987 688887754 4555544443
No 489
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.85 E-value=0.00058 Score=54.09 Aligned_cols=48 Identities=10% Similarity=0.088 Sum_probs=31.4
Q ss_pred CCCCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhhcCccc-ccccccceeeee
Q psy7938 4 DEVPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFLAGNLK-HSKFKKNLYIHL 58 (305)
Q Consensus 4 ~~~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~a~wc~-~c~~~~p~~~~~ 58 (305)
...|.+.|...+.+.+.+. ++. -+.+|+.||++||+ +|....+.+.++
T Consensus 10 ~~~PdF~L~d~~G~~v~l~--d~~-----Gk~vll~F~~t~Cp~~Cp~~~~~l~~l 58 (170)
T 4hde_A 10 WDLETFQFTNQDGKPFGTK--DLK-----GKVWVADFMFTNCQTVCPPMTANMAKL 58 (170)
T ss_dssp BCCCCCEEECTTSCEEEHH--HHT-----TSCEEEEEECTTCSSSHHHHHHHHHHH
T ss_pred CcCCCcEEECCCCCEEeHH--HhC-----CCEEEEEEECCCCCCcccHHHHHHHHH
Confidence 4578888888777777662 211 24678889999996 896444444333
No 490
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=96.84 E-value=0.0004 Score=58.66 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=33.5
Q ss_pred HHHHHHcCCCCC-----CCCeEEEEecCcCceec-cC-CCCCCCHHHHHHHHHHHHc
Q psy7938 104 QKILEFFGMSKD-----EVPSLRLIRLEEDMAKY-KP-ATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 104 ~~l~~~~~I~~~-----~~Ptl~~~~~~~~~~~~-~~-~~~~~~~~~l~~fv~~~~~ 153 (305)
..+++.|||..+ .+|++.+++..+.+... .+ ....++.+++.+.+.....
T Consensus 106 ~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~alq~ 162 (249)
T 3a2v_A 106 GTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKL 162 (249)
T ss_dssp SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHHH
T ss_pred hHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHHHh
Confidence 568899998521 68999999866553222 11 1224688999999887654
No 491
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.80 E-value=0.00027 Score=51.03 Aligned_cols=22 Identities=23% Similarity=0.140 Sum_probs=17.6
Q ss_pred hhhhhcCcccccccccceeeee
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
|+-|+++||++|+..++++.+.
T Consensus 24 v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 24 VIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEcCCCCchHHHHHHHHHHc
Confidence 6679999999999877666555
No 492
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.80 E-value=0.00014 Score=58.16 Aligned_cols=130 Identities=13% Similarity=0.067 Sum_probs=63.7
Q ss_pred CCeEEEEeeccCceecCCCCCCCChhHHHHHhhhhh-cCcccccccccceeeeecccccc----cCCCCCcchhhhhhhH
Q psy7938 6 VPSLRLIRLEEDMAKYKPATPEINVDTVRSFVTEFL-AGNLKHSKFKKNLYIHLEEDMAK----YKPASPEINVDTVRSF 80 (305)
Q Consensus 6 ~p~i~l~~~~~~~~~~~~~~~~~~~~~~~~~iv~f~-a~wc~~c~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 80 (305)
.|.+.+...+...+.+. ++. -+..++.|| +.||++|+...|.+.++...++. +..-+. -+.+....+
T Consensus 31 aP~f~l~~~~G~~v~l~--d~~-----Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~-D~~~~~~~~ 102 (179)
T 3ixr_A 31 LLNHPLMLSGSTCKTLS--DYT-----NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSR-DSVKSHDSF 102 (179)
T ss_dssp HHHCCEEEGGGEEECGG--GGT-----TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES-CCHHHHHHH
T ss_pred CCCeeEECCCCCEEeHH--HHC-----CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcC-CCHHHHHHH
Confidence 67777777666555552 221 135677787 99999997655544444322221 000000 011222222
Q ss_pred HHHHhhcCceEEEEEEeCCchhHHHHHHHcCCCCC----------CCCeEEEEecCcCce-eccCCCCCCCHHHHHHHHH
Q psy7938 81 VTEFLAGNLKVLFVTINTDEEDHQKILEFFGMSKD----------EVPSLRLIRLEEDMA-KYKPATPEISVDTVRSFVT 149 (305)
Q Consensus 81 ~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~I~~~----------~~Ptl~~~~~~~~~~-~~~~~~~~~~~~~l~~fv~ 149 (305)
+.+. .-.+.++ .|. ...+++.||+... ..|+..+++..+.+. .+.........+++.+.+.
T Consensus 103 ~~~~---~~~f~~l-~D~----~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 103 CAKQ---GFTFPLV-SDS----DAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLK 174 (179)
T ss_dssp HHHH---TCCSCEE-ECT----TCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHH
T ss_pred HHHc---CCceEEE-ECC----chHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHH
Confidence 2221 1111111 132 2467888888410 158899998665532 2321122344566666665
Q ss_pred HH
Q psy7938 150 EF 151 (305)
Q Consensus 150 ~~ 151 (305)
..
T Consensus 175 ~l 176 (179)
T 3ixr_A 175 AH 176 (179)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 493
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.77 E-value=0.00022 Score=49.59 Aligned_cols=75 Identities=12% Similarity=0.120 Sum_probs=45.8
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch--hHHHHHHHcCC--
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE--DHQKILEFFGM-- 112 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--~~~~l~~~~~I-- 112 (305)
|+-|+++||++|++...++.+. .-.+.+..+|.+.. ...++.+.+|.
T Consensus 6 v~ly~~~~Cp~C~~~~~~L~~~-----------------------------~i~~~~~~vd~~~~~~~~~el~~~~g~~~ 56 (89)
T 3msz_A 6 VKIYTRNGCPYCVWAKQWFEEN-----------------------------NIAFDETIIDDYAQRSKFYDEMNQSGKVI 56 (89)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----------------------------TCCCEEEECCSHHHHHHHHHHHHTTTCCS
T ss_pred EEEEEcCCChhHHHHHHHHHHc-----------------------------CCCceEEEeecCCChhHHHHHHHHhCCCC
Confidence 4568899999998776555444 11233444555421 22457777887
Q ss_pred ---CCCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHHc
Q psy7938 113 ---SKDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFLA 153 (305)
Q Consensus 113 ---~~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~~ 153 (305)
. ++|++.+ .| ++. + ..+++.+++++.+.
T Consensus 57 ~~~~--~vP~i~i--~g----~~i---~--g~~~i~~~~~~~~~ 87 (89)
T 3msz_A 57 FPIS--TVPQIFI--DD----EHI---G--GFTELKANADKILN 87 (89)
T ss_dssp SCCC--SSCEEEE--TT----EEE---E--SHHHHHHTHHHHTT
T ss_pred CCCC--ccCEEEE--CC----EEE---e--ChHHHHHHHHHHhc
Confidence 6 8999854 33 221 1 35678888777654
No 494
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.76 E-value=0.0008 Score=54.09 Aligned_cols=30 Identities=20% Similarity=0.524 Sum_probs=28.4
Q ss_pred CCcEEEEEECCCChhhhhHHHHHHHHHHHh
Q psy7938 190 SKHVLVEFYAPWCGHCKQLAPIYDKLGEKF 219 (305)
Q Consensus 190 ~~~~lv~f~~~~C~~C~~~~~~~~~la~~~ 219 (305)
+++++|.|++.||++|+.+.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 578999999999999999999999999988
No 495
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.73 E-value=0.00053 Score=51.78 Aligned_cols=56 Identities=16% Similarity=0.366 Sum_probs=36.5
Q ss_pred EEEEECCCChhhhhH-HHHHHHHHHHhCCCCceEEEEEeCCcc------cc-ccCCcccccEEEEEeCC
Q psy7938 194 LVEFYAPWCGHCKQL-APIYDKLGEKFADRDDITIAKIDATVN------EL-EHTKITSFPTLKLYAKD 254 (305)
Q Consensus 194 lv~f~~~~C~~C~~~-~~~~~~la~~~~~~~~v~~~~id~~~~------~~-~~~~i~~~Ptl~~f~~g 254 (305)
++.|+.+||++|+.+ .+.+.+++.. ...+.++.+|.+.+ .. +.++..++|+++ -+|
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~~~~---~i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~vf--i~g 102 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQELNVP---KSKALVLELDEMSNGSEIQDALEEISGQKTVPNVY--ING 102 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTSCCC---GGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEE--ETT
T ss_pred EEEEECCCCCchHHHHHHHHHhcCcc---CCCcEEEEccccCCHHHHHHHHHHHhCCCCCCEEE--ECC
Confidence 678999999999999 8777765311 02345555554432 12 457889999974 455
No 496
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=96.72 E-value=0.00021 Score=48.86 Aligned_cols=52 Identities=17% Similarity=0.184 Sum_probs=35.1
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc--hhHHHHHHHcCCCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE--EDHQKILEFFGMSK 114 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~l~~~~~I~~ 114 (305)
|+-|+++||++|+...+++.+. + +.|..+|.+. .....+.+.+|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------------------------------~-i~~~~~~i~~~~~~~~~~~~~~~~~- 50 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------------------------------G-VSFQELPIDGNAAKREEMIKRSGRT- 50 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------------------------------T-CCCEEEECTTCSHHHHHHHHHHSSC-
T ss_pred EEEEECCCChhHHHHHHHHHHC------------------------------C-CCcEEEECCCCHHHHHHHHHHhCCC-
Confidence 3468899999998776554433 1 3455566653 2334577889997
Q ss_pred CCCCeEE
Q psy7938 115 DEVPSLR 121 (305)
Q Consensus 115 ~~~Ptl~ 121 (305)
++|++.
T Consensus 51 -~vP~l~ 56 (82)
T 1fov_A 51 -TVPQIF 56 (82)
T ss_dssp -CSCEEE
T ss_pred -CcCEEE
Confidence 999984
No 497
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=96.71 E-value=0.0036 Score=51.78 Aligned_cols=82 Identities=6% Similarity=0.016 Sum_probs=52.7
Q ss_pred CCCcEEEEEECCC-Chhhh-----hHHHHHHHHHHHhCCCCceEEEEEeCCcc------------------------c-c
Q psy7938 189 KSKHVLVEFYAPW-CGHCK-----QLAPIYDKLGEKFADRDDITIAKIDATVN------------------------E-L 237 (305)
Q Consensus 189 ~~~~~lv~f~~~~-C~~C~-----~~~~~~~~la~~~~~~~~v~~~~id~~~~------------------------~-~ 237 (305)
.++.++|.||..| |+.|. ...+.|.++ + .++.++.|..+.. . .
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~---~gv~VvgIS~Ds~~~~~~f~~~~gl~~fplLsD~~~~~va 120 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W---PHLKLIVITVDSPSSLARARHEHGLPNIALLSTLRGRDFH 120 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C---TTSEEEEEESSCHHHHHHHHHHHCCTTCEEEESTTCTTHH
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c---CCCEEEEEECCCHHHHHHHHHHcCCCCceEEEcCCchHHH
Confidence 3678999999888 99999 767777665 4 2344444433321 1 1
Q ss_pred ccCCccc---------ccEEEEEeCCCceEEeee-----CCCCHHHHHHHHHh
Q psy7938 238 EHTKITS---------FPTLKLYAKDDNRVIDYN-----GERVLEALSNFVES 276 (305)
Q Consensus 238 ~~~~i~~---------~Ptl~~f~~g~~~~~~~~-----g~~~~~~l~~fi~~ 276 (305)
+.|++.. .|+.+++++++....... +..+.+.+.+.|..
T Consensus 121 k~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~ 173 (224)
T 3keb_A 121 KRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQE 173 (224)
T ss_dssp HHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHH
T ss_pred HHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHH
Confidence 4456653 799999998777433322 24567777777664
No 498
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.69 E-value=0.00014 Score=52.27 Aligned_cols=22 Identities=5% Similarity=-0.114 Sum_probs=17.0
Q ss_pred hhhhhcCcccccccccceeeee
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHL 58 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~ 58 (305)
|+-|+++||++|++...++.+.
T Consensus 18 v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 18 IEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHC
Confidence 5569999999998777555544
No 499
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.67 E-value=0.00014 Score=52.70 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=34.5
Q ss_pred hhhhc-----CcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCch--hHHHHHHHc
Q psy7938 38 TEFLA-----GNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDEE--DHQKILEFF 110 (305)
Q Consensus 38 v~f~a-----~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~--~~~~l~~~~ 110 (305)
+-|+. +||++|+...+++.+. + +.|..+|.+.. ....+.+.+
T Consensus 20 vvf~~g~~~~~~C~~C~~~~~~L~~~------------------------------~-i~~~~vdi~~~~~~~~~l~~~~ 68 (105)
T 2yan_A 20 MLFMKGNKQEAKCGFSKQILEILNST------------------------------G-VEYETFDILEDEEVRQGLKAYS 68 (105)
T ss_dssp EEEESBCSSSBCTTHHHHHHHHHHHH------------------------------T-CCCEEEEGGGCHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCccHHHHHHHHHHC------------------------------C-CCeEEEECCCCHHHHHHHHHHH
Confidence 34777 9999998777665544 1 45677777621 223366778
Q ss_pred CCCCCCCCeEE
Q psy7938 111 GMSKDEVPSLR 121 (305)
Q Consensus 111 ~I~~~~~Ptl~ 121 (305)
|+. ++|++.
T Consensus 69 g~~--~vP~v~ 77 (105)
T 2yan_A 69 NWP--TYPQLY 77 (105)
T ss_dssp TCC--SSCEEE
T ss_pred CCC--CCCeEE
Confidence 987 999983
No 500
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.66 E-value=0.00029 Score=49.87 Aligned_cols=75 Identities=11% Similarity=0.148 Sum_probs=45.4
Q ss_pred hhhhhcCcccccccccceeeeecccccccCCCCCcchhhhhhhHHHHHhhcCceEEEEEEeCCc-hhHHHHHHHc--CCC
Q psy7938 37 VTEFLAGNLKHSKFKKNLYIHLEEDMAKYKPASPEINVDTVRSFVTEFLAGNLKVLFVTINTDE-EDHQKILEFF--GMS 113 (305)
Q Consensus 37 iv~f~a~wc~~c~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-~~~~~l~~~~--~I~ 113 (305)
|+-|..+||++|++.+.++.+. .|.|-.+|.+. ++..+...+. |.+
T Consensus 6 I~vYs~~~Cp~C~~aK~~L~~~-------------------------------gi~y~~idi~~d~~~~~~~~~~~~G~~ 54 (92)
T 2lqo_A 6 LTIYTTSWCGYCLRLKTALTAN-------------------------------RIAYDEVDIEHNRAAAEFVGSVNGGNR 54 (92)
T ss_dssp EEEEECTTCSSHHHHHHHHHHT-------------------------------TCCCEEEETTTCHHHHHHHHHHSSSSS
T ss_pred EEEEcCCCCHhHHHHHHHHHhc-------------------------------CCceEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4568899999998665333322 35677777762 2222222232 565
Q ss_pred CCCCCeEEEEecCcCceeccCCCCCCCHHHHHHHHHHHH
Q psy7938 114 KDEVPSLRLIRLEEDMAKYKPATPEISVDTVRSFVTEFL 152 (305)
Q Consensus 114 ~~~~Ptl~~~~~~~~~~~~~~~~~~~~~~~l~~fv~~~~ 152 (305)
++|++++ ..|. .. .+.+.++|.+++.+..
T Consensus 55 --tVP~I~i-~Dg~---~l----~~~~~~el~~~L~el~ 83 (92)
T 2lqo_A 55 --TVPTVKF-ADGS---TL----TNPSADEVKAKLVKIA 83 (92)
T ss_dssp --CSCEEEE-TTSC---EE----ESCCHHHHHHHHHHHH
T ss_pred --EeCEEEE-eCCE---EE----eCCCHHHHHHHHHHhc
Confidence 8998754 3332 22 2457888999988874
Done!