Query psy7942
Match_columns 216
No_of_seqs 117 out of 1182
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 22:46:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 1.6E-29 5.4E-34 222.5 19.6 186 3-211 100-291 (367)
2 1sji_A Calsequestrin 2, calseq 100.0 2.7E-27 9.3E-32 206.5 19.6 185 3-210 98-288 (350)
3 4f9z_D Endoplasmic reticulum r 100.0 2.6E-27 8.8E-32 195.2 17.6 159 29-210 10-172 (227)
4 3ec3_A Protein disulfide-isome 99.9 3.7E-26 1.3E-30 191.1 16.4 161 25-211 3-178 (250)
5 2h8l_A Protein disulfide-isome 99.9 2.3E-25 7.9E-30 186.2 16.5 162 24-211 2-178 (252)
6 3uem_A Protein disulfide-isome 99.9 5.6E-25 1.9E-29 191.8 16.7 164 24-210 13-176 (361)
7 3f8u_A Protein disulfide-isome 99.9 1.7E-23 5.7E-28 189.1 18.6 184 3-212 84-283 (481)
8 2r2j_A Thioredoxin domain-cont 99.9 1.3E-21 4.4E-26 172.6 14.6 184 3-212 91-280 (382)
9 2b5e_A Protein disulfide-isome 99.8 1.5E-20 5.1E-25 170.9 10.4 172 6-210 101-278 (504)
10 2l4c_A Endoplasmic reticulum r 99.8 1.9E-19 6.5E-24 135.6 10.4 107 21-150 12-124 (124)
11 3apo_A DNAJ homolog subfamily 99.7 2.8E-16 9.6E-21 149.6 19.8 187 3-211 518-717 (780)
12 3apo_A DNAJ homolog subfamily 99.7 5.2E-16 1.8E-20 147.8 19.0 205 3-211 196-497 (780)
13 3ed3_A Protein disulfide-isome 99.6 4.9E-15 1.7E-19 126.7 10.4 130 6-160 121-279 (298)
14 3uem_A Protein disulfide-isome 99.6 3.6E-13 1.2E-17 116.9 21.2 187 4-212 93-312 (361)
15 3us3_A Calsequestrin-1; calciu 99.4 1.3E-12 4.4E-17 114.5 14.3 154 29-209 14-181 (367)
16 1sji_A Calsequestrin 2, calseq 99.4 5E-12 1.7E-16 109.7 16.4 153 30-209 13-179 (350)
17 3idv_A Protein disulfide-isome 99.4 8E-12 2.7E-16 101.9 15.5 159 29-211 16-192 (241)
18 3ed3_A Protein disulfide-isome 99.4 2.7E-11 9.1E-16 103.4 18.8 155 29-209 18-197 (298)
19 3f8u_A Protein disulfide-isome 99.4 1.6E-11 5.5E-16 110.5 16.0 154 30-209 3-165 (481)
20 2b5e_A Protein disulfide-isome 99.4 4E-11 1.4E-15 108.7 18.4 154 29-208 15-176 (504)
21 3idv_A Protein disulfide-isome 99.3 1.3E-11 4.4E-16 100.6 11.7 128 3-152 98-239 (241)
22 2r2j_A Thioredoxin domain-cont 99.3 4.9E-11 1.7E-15 104.8 12.6 153 30-208 7-171 (382)
23 1a8l_A Protein disulfide oxido 99.2 4.2E-10 1.5E-14 91.0 12.5 157 34-210 7-179 (226)
24 3zzx_A Thioredoxin; oxidoreduc 99.0 1.6E-09 5.6E-14 78.3 10.2 97 30-148 2-104 (105)
25 2ywm_A Glutaredoxin-like prote 99.0 5.2E-09 1.8E-13 84.9 13.7 154 35-210 7-176 (229)
26 3h79_A Thioredoxin-like protei 98.9 1.3E-08 4.5E-13 75.0 11.1 101 28-149 15-127 (127)
27 2c0g_A ERP29 homolog, windbeut 98.8 2.1E-08 7.3E-13 83.5 11.0 98 29-149 17-131 (248)
28 2qc7_A ERP31, ERP28, endoplasm 98.8 3.1E-08 1E-12 82.1 11.6 99 29-149 6-118 (240)
29 3bj5_A Protein disulfide-isome 98.8 5.6E-09 1.9E-13 80.2 6.5 66 144-209 7-72 (147)
30 4euy_A Uncharacterized protein 98.7 1.6E-08 5.4E-13 72.0 6.3 97 31-148 3-103 (105)
31 4f9z_D Endoplasmic reticulum r 98.7 2.3E-07 7.8E-12 75.6 13.7 122 5-147 86-222 (227)
32 2ywm_A Glutaredoxin-like prote 98.7 1E-07 3.5E-12 77.1 11.3 119 5-148 93-218 (229)
33 3gnj_A Thioredoxin domain prot 98.7 2E-07 6.8E-12 66.3 11.1 98 29-148 5-108 (111)
34 1r26_A Thioredoxin; redox-acti 98.7 1.6E-07 5.6E-12 69.5 10.9 97 30-148 21-121 (125)
35 2wz9_A Glutaredoxin-3; protein 98.7 1.8E-07 6E-12 71.4 11.2 101 27-149 11-117 (153)
36 2vim_A Thioredoxin, TRX; thior 98.7 2.4E-07 8.4E-12 64.9 11.1 97 30-148 1-103 (104)
37 1gh2_A Thioredoxin-like protei 98.7 1.5E-07 5E-12 66.9 9.9 98 29-148 2-105 (107)
38 3m9j_A Thioredoxin; oxidoreduc 98.7 2.4E-07 8.1E-12 65.2 10.8 97 30-148 2-104 (105)
39 1xwb_A Thioredoxin; dimerizati 98.7 3.1E-07 1E-11 64.7 11.1 97 30-148 2-105 (106)
40 2hls_A Protein disulfide oxido 98.6 2.4E-07 8.3E-12 76.4 11.6 153 33-211 11-184 (243)
41 3qfa_C Thioredoxin; protein-pr 98.6 4E-07 1.4E-11 66.1 11.3 99 28-148 11-115 (116)
42 2dj1_A Protein disulfide-isome 98.6 2E-07 6.7E-12 69.4 9.3 101 30-153 19-127 (140)
43 3uvt_A Thioredoxin domain-cont 98.6 3.6E-07 1.2E-11 64.8 10.2 97 29-148 6-110 (111)
44 1a8l_A Protein disulfide oxido 98.6 1.7E-07 5.9E-12 75.4 9.5 121 6-148 92-224 (226)
45 2voc_A Thioredoxin; electron t 98.6 2.4E-07 8.1E-12 66.6 9.3 99 30-151 3-106 (112)
46 2oe3_A Thioredoxin-3; electron 98.6 3.7E-07 1.3E-11 66.2 9.9 97 29-147 13-113 (114)
47 1syr_A Thioredoxin; SGPP, stru 98.6 6.7E-07 2.3E-11 64.1 11.2 100 27-148 7-110 (112)
48 3tco_A Thioredoxin (TRXA-1); d 98.6 3.9E-07 1.4E-11 64.3 9.6 99 28-148 4-107 (109)
49 2es7_A Q8ZP25_salty, putative 98.6 1.9E-07 6.4E-12 71.1 8.3 106 29-156 18-131 (142)
50 2dml_A Protein disulfide-isome 98.6 5.6E-07 1.9E-11 66.0 10.7 99 29-148 18-122 (130)
51 1ep7_A Thioredoxin CH1, H-type 98.6 5.8E-07 2E-11 64.0 10.4 99 28-148 2-109 (112)
52 3die_A Thioredoxin, TRX; elect 98.6 5.2E-07 1.8E-11 63.5 9.8 98 28-148 3-105 (106)
53 2e0q_A Thioredoxin; electron t 98.6 5.3E-07 1.8E-11 62.9 9.7 95 32-148 3-101 (104)
54 1xfl_A Thioredoxin H1; AT3G510 98.6 8.2E-07 2.8E-11 65.3 11.1 99 28-148 16-122 (124)
55 1mek_A Protein disulfide isome 98.6 4.8E-07 1.6E-11 64.9 9.6 101 30-151 9-118 (120)
56 3apq_A DNAJ homolog subfamily 98.6 4E-07 1.4E-11 73.0 10.1 106 30-157 99-209 (210)
57 1nsw_A Thioredoxin, TRX; therm 98.6 6.3E-07 2.2E-11 63.1 10.0 97 30-148 2-103 (105)
58 3f3q_A Thioredoxin-1; His TAG, 98.6 9.7E-07 3.3E-11 63.2 11.1 97 30-148 8-108 (109)
59 2yzu_A Thioredoxin; redox prot 98.5 7.2E-07 2.5E-11 62.8 9.8 97 30-148 3-104 (109)
60 2xc2_A Thioredoxinn; oxidoredu 98.5 6.5E-07 2.2E-11 64.6 9.7 96 30-148 15-116 (117)
61 2i4a_A Thioredoxin; acidophIle 98.5 6.2E-07 2.1E-11 63.2 9.4 98 29-148 3-106 (107)
62 2i1u_A Thioredoxin, TRX, MPT46 98.5 7.2E-07 2.4E-11 64.4 9.8 100 27-148 11-116 (121)
63 2qgv_A Hydrogenase-1 operon pr 98.5 4.8E-07 1.6E-11 68.9 9.1 108 17-149 9-124 (140)
64 2vm1_A Thioredoxin, thioredoxi 98.5 1.3E-06 4.3E-11 62.7 10.9 100 27-148 5-112 (118)
65 1x5d_A Protein disulfide-isome 98.5 8.3E-07 2.8E-11 65.2 10.1 98 29-148 8-115 (133)
66 2j23_A Thioredoxin; immune pro 98.5 6.4E-07 2.2E-11 65.4 9.3 99 28-148 15-119 (121)
67 3hz4_A Thioredoxin; NYSGXRC, P 98.5 5.3E-07 1.8E-11 67.6 9.0 100 27-148 5-110 (140)
68 1t00_A Thioredoxin, TRX; redox 98.5 9.5E-07 3.3E-11 63.0 10.0 98 29-148 6-109 (112)
69 3ga4_A Dolichyl-diphosphooligo 98.5 5.3E-07 1.8E-11 71.4 9.4 117 25-162 15-165 (178)
70 1thx_A Thioredoxin, thioredoxi 98.5 1E-06 3.5E-11 62.8 10.1 100 27-148 6-111 (115)
71 3d6i_A Monothiol glutaredoxin- 98.5 1.1E-06 3.8E-11 62.7 10.3 97 30-148 2-107 (112)
72 2av4_A Thioredoxin-like protei 98.5 5.7E-07 2E-11 69.7 9.2 108 17-148 13-137 (160)
73 2l6c_A Thioredoxin; oxidoreduc 98.5 7.9E-07 2.7E-11 63.8 9.4 98 32-151 6-107 (110)
74 3p2a_A Thioredoxin 2, putative 98.5 5.9E-07 2E-11 67.8 9.1 97 30-148 40-141 (148)
75 1w4v_A Thioredoxin, mitochondr 98.5 1.5E-06 5.1E-11 63.1 10.8 96 31-147 15-116 (119)
76 3hxs_A Thioredoxin, TRXP; elec 98.5 2.1E-06 7.1E-11 63.9 11.7 99 28-148 22-137 (141)
77 1ti3_A Thioredoxin H, PTTRXH1; 98.5 8.2E-07 2.8E-11 63.2 8.9 98 29-148 5-110 (113)
78 2qsi_A Putative hydrogenase ex 98.5 5.8E-07 2E-11 68.2 8.3 96 32-149 19-122 (137)
79 2ppt_A Thioredoxin-2; thiredox 98.5 1.1E-06 3.6E-11 67.5 9.7 97 30-148 49-150 (155)
80 1x5e_A Thioredoxin domain cont 98.4 1E-06 3.6E-11 64.4 9.1 103 29-156 8-116 (126)
81 3aps_A DNAJ homolog subfamily 98.4 1.1E-06 3.8E-11 63.7 9.1 98 29-148 4-111 (122)
82 2trx_A Thioredoxin; electron t 98.4 1.6E-06 5.5E-11 61.3 9.7 97 30-148 4-106 (108)
83 2vlu_A Thioredoxin, thioredoxi 98.4 2.9E-06 9.8E-11 61.4 10.9 99 28-148 12-118 (122)
84 3q6o_A Sulfhydryl oxidase 1; p 98.4 1.2E-05 4E-10 65.8 15.5 128 29-178 13-165 (244)
85 2djk_A PDI, protein disulfide- 98.4 4.6E-06 1.6E-10 62.1 11.6 101 27-148 5-113 (133)
86 2l5l_A Thioredoxin; structural 98.4 4.5E-06 1.5E-10 62.0 11.1 98 29-148 10-124 (136)
87 1dby_A Chloroplast thioredoxin 98.4 4.7E-06 1.6E-10 58.7 10.5 97 30-148 3-105 (107)
88 2f51_A Thioredoxin; electron t 98.4 3.6E-06 1.2E-10 61.2 9.9 103 28-151 3-114 (118)
89 2o8v_B Thioredoxin 1; disulfid 98.3 2.2E-06 7.4E-11 63.4 8.7 98 29-148 23-126 (128)
90 3gix_A Thioredoxin-like protei 98.3 4.3E-06 1.5E-10 63.6 10.5 98 30-148 5-119 (149)
91 2h8l_A Protein disulfide-isome 98.3 3.4E-06 1.1E-10 69.6 10.4 122 4-148 89-228 (252)
92 1fb6_A Thioredoxin M; electron 98.3 4.7E-06 1.6E-10 58.3 9.6 95 31-147 3-103 (105)
93 2hls_A Protein disulfide oxido 98.3 5.1E-06 1.7E-10 68.4 10.8 117 6-149 96-225 (243)
94 3iv4_A Putative oxidoreductase 98.3 3.2E-06 1.1E-10 61.8 8.5 95 30-145 8-111 (112)
95 1oaz_A Thioredoxin 1; immune s 98.3 1.4E-06 4.7E-11 64.1 6.5 108 30-148 5-121 (123)
96 3d22_A TRXH4, thioredoxin H-ty 98.3 7.5E-06 2.6E-10 60.7 10.4 99 28-148 24-130 (139)
97 3t58_A Sulfhydryl oxidase 1; o 98.3 2.3E-05 8E-10 71.6 15.6 143 29-199 13-180 (519)
98 3qou_A Protein YBBN; thioredox 98.3 3.4E-06 1.2E-10 70.3 9.3 101 27-149 6-113 (287)
99 2fwh_A Thiol:disulfide interch 98.3 1.4E-05 4.7E-10 59.2 11.5 102 27-148 10-126 (134)
100 3ul3_B Thioredoxin, thioredoxi 98.2 1.4E-06 4.8E-11 64.1 5.8 90 38-148 34-128 (128)
101 1v98_A Thioredoxin; oxidoreduc 98.2 6.3E-06 2.2E-10 61.4 9.4 97 30-148 35-136 (140)
102 1zma_A Bacterocin transport ac 98.2 1.4E-05 4.9E-10 57.6 10.4 99 30-146 14-117 (118)
103 3dxb_A Thioredoxin N-terminall 98.2 6.8E-06 2.3E-10 66.4 9.2 98 30-149 14-117 (222)
104 2trc_P Phosducin, MEKA, PP33; 98.2 2.9E-06 1E-10 68.9 7.0 99 30-149 101-212 (217)
105 2djj_A PDI, protein disulfide- 98.2 5.7E-06 1.9E-10 59.7 7.5 97 29-149 8-116 (121)
106 1qgv_A Spliceosomal protein U5 98.2 9.6E-06 3.3E-10 61.2 8.9 100 30-148 5-119 (142)
107 2pu9_C TRX-F, thioredoxin F-ty 98.1 2E-05 6.9E-10 56.0 10.0 96 29-147 6-108 (111)
108 3evi_A Phosducin-like protein 98.1 1.2E-05 4.1E-10 59.1 8.4 95 30-149 5-113 (118)
109 1wmj_A Thioredoxin H-type; str 98.1 2.3E-06 8E-11 62.4 4.5 100 28-149 14-121 (130)
110 2dj3_A Protein disulfide-isome 98.1 3.2E-06 1.1E-10 62.1 5.2 102 29-151 8-119 (133)
111 3emx_A Thioredoxin; structural 98.1 1.7E-05 5.9E-10 58.9 9.1 95 30-149 18-125 (135)
112 2dj0_A Thioredoxin-related tra 98.1 1.6E-06 5.4E-11 64.6 2.8 97 30-148 9-119 (137)
113 1wou_A Thioredoxin -related pr 98.1 2.1E-05 7.1E-10 57.5 8.7 95 31-147 7-122 (123)
114 3ec3_A Protein disulfide-isome 98.1 6.9E-05 2.4E-09 61.6 12.8 122 5-148 91-226 (250)
115 1faa_A Thioredoxin F; electron 98.0 4.9E-05 1.7E-09 55.0 10.5 98 28-148 18-122 (124)
116 2l57_A Uncharacterized protein 98.0 4.5E-05 1.5E-09 55.4 9.4 91 42-150 22-117 (126)
117 3cxg_A Putative thioredoxin; m 98.0 2.1E-05 7.1E-10 58.4 7.5 98 29-148 21-127 (133)
118 1a0r_P Phosducin, MEKA, PP33; 98.0 3.3E-05 1.1E-09 63.9 9.3 99 29-149 113-225 (245)
119 2yj7_A LPBCA thioredoxin; oxid 97.1 1.5E-06 5.1E-11 60.7 0.0 95 31-147 4-104 (106)
120 2djk_A PDI, protein disulfide- 97.9 1.7E-05 5.8E-10 58.9 5.6 62 148-211 3-64 (133)
121 2dbc_A PDCL2, unnamed protein 97.9 8.4E-05 2.9E-09 55.2 9.4 96 29-149 11-120 (135)
122 3fk8_A Disulphide isomerase; A 97.8 9E-05 3.1E-09 54.3 7.8 94 34-147 13-130 (133)
123 3qcp_A QSOX from trypanosoma b 97.7 2E-05 6.7E-10 71.1 3.5 96 30-147 25-136 (470)
124 1fo5_A Thioredoxin; disulfide 97.6 0.00015 5E-09 48.5 6.6 77 47-148 3-84 (85)
125 3q6o_A Sulfhydryl oxidase 1; p 97.6 0.00098 3.3E-08 54.1 12.5 118 4-147 105-237 (244)
126 1nho_A Probable thioredoxin; b 97.5 0.00021 7.2E-09 47.7 6.3 76 48-148 3-83 (85)
127 2kuc_A Putative disulphide-iso 97.5 0.00031 1.1E-08 51.0 7.3 87 44-150 25-121 (130)
128 3bj5_A Protein disulfide-isome 97.1 0.0088 3E-07 45.2 11.5 107 21-148 7-125 (147)
129 1lu4_A Soluble secreted antige 97.0 0.0057 2E-07 44.0 9.7 102 45-148 23-134 (136)
130 1zzo_A RV1677; thioredoxin fol 96.9 0.011 3.9E-07 42.2 10.2 102 45-148 24-133 (136)
131 3f9u_A Putative exported cytoc 96.8 0.0034 1.2E-07 47.9 7.4 40 108-148 123-164 (172)
132 3kp8_A Vkorc1/thioredoxin doma 96.8 0.0015 5.2E-08 46.5 5.0 75 47-148 13-93 (106)
133 2lst_A Thioredoxin; structural 95.7 0.00025 8.7E-09 51.5 0.0 92 37-148 10-114 (130)
134 2fgx_A Putative thioredoxin; N 96.7 0.0044 1.5E-07 44.6 6.6 74 48-145 30-106 (107)
135 3erw_A Sporulation thiol-disul 96.7 0.013 4.5E-07 42.4 9.4 101 45-146 33-145 (145)
136 3raz_A Thioredoxin-related pro 96.6 0.025 8.4E-07 41.8 10.8 103 45-148 23-138 (151)
137 1ilo_A Conserved hypothetical 96.6 0.019 6.5E-07 37.2 8.6 69 50-145 3-76 (77)
138 4evm_A Thioredoxin family prot 96.5 0.024 8.3E-07 40.2 9.9 102 45-147 21-136 (138)
139 1sen_A Thioredoxin-like protei 96.5 0.0033 1.1E-07 48.1 5.1 102 26-147 26-145 (164)
140 2b5x_A YKUV protein, TRXY; thi 96.4 0.016 5.6E-07 42.0 8.2 103 45-148 28-143 (148)
141 2l5o_A Putative thioredoxin; s 96.3 0.031 1E-06 41.1 9.4 103 45-148 27-139 (153)
142 3t58_A Sulfhydryl oxidase 1; o 96.2 0.067 2.3E-06 48.6 12.7 115 7-147 107-237 (519)
143 3ira_A Conserved protein; meth 96.1 0.011 3.7E-07 46.1 6.3 85 20-123 12-113 (173)
144 2lja_A Putative thiol-disulfid 96.1 0.036 1.2E-06 40.6 8.8 103 45-148 29-141 (152)
145 3dml_A Putative uncharacterize 96.0 0.011 3.9E-07 43.0 5.5 83 45-148 17-108 (116)
146 3ia1_A THIO-disulfide isomeras 95.9 0.025 8.5E-07 41.7 7.3 101 47-149 31-143 (154)
147 2f9s_A Thiol-disulfide oxidore 95.9 0.039 1.3E-06 40.5 8.3 103 45-148 25-136 (151)
148 2h30_A Thioredoxin, peptide me 95.9 0.041 1.4E-06 40.8 8.5 104 45-149 37-155 (164)
149 3or5_A Thiol:disulfide interch 95.9 0.049 1.7E-06 40.4 8.8 103 45-148 33-149 (165)
150 2ju5_A Thioredoxin disulfide i 95.8 0.036 1.2E-06 41.5 7.9 84 44-147 45-149 (154)
151 3tco_A Thioredoxin (TRXA-1); d 95.7 0.023 7.9E-07 39.0 5.8 60 150-210 3-62 (109)
152 1z6n_A Hypothetical protein PA 95.6 0.071 2.4E-06 41.0 8.9 89 37-147 44-140 (167)
153 3hdc_A Thioredoxin family prot 95.5 0.081 2.8E-06 39.3 8.7 105 45-151 40-153 (158)
154 1nsw_A Thioredoxin, TRX; therm 95.5 0.042 1.4E-06 37.6 6.5 58 153-211 2-59 (105)
155 3lor_A Thiol-disulfide isomera 95.4 0.21 7.4E-06 36.6 10.8 103 45-148 29-153 (160)
156 2yzu_A Thioredoxin; redox prot 95.3 0.035 1.2E-06 38.0 5.7 58 153-211 3-60 (109)
157 1thx_A Thioredoxin, thioredoxi 95.3 0.076 2.6E-06 36.7 7.6 60 151-211 7-67 (115)
158 1ttz_A Conserved hypothetical 95.1 0.058 2E-06 36.9 6.3 42 101-148 34-75 (87)
159 3gl3_A Putative thiol:disulfid 95.1 0.12 4.1E-06 37.7 8.6 105 45-149 27-141 (152)
160 3ga4_A Dolichyl-diphosphooligo 95.1 0.059 2E-06 42.1 7.0 71 141-211 8-91 (178)
161 3gnj_A Thioredoxin domain prot 95.0 0.046 1.6E-06 37.7 5.7 59 152-211 5-64 (111)
162 3eyt_A Uncharacterized protein 95.0 0.14 4.7E-06 37.7 8.7 103 45-148 27-150 (158)
163 3kh7_A Thiol:disulfide interch 94.9 0.28 9.5E-06 37.3 10.3 101 45-148 57-165 (176)
164 2trx_A Thioredoxin; electron t 94.9 0.1 3.5E-06 35.7 7.2 59 152-211 3-62 (108)
165 2i4a_A Thioredoxin; acidophIle 94.9 0.085 2.9E-06 36.0 6.7 59 152-211 3-62 (107)
166 1hyu_A AHPF, alkyl hydroperoxi 94.9 0.18 6.3E-06 45.4 10.6 115 7-148 76-198 (521)
167 2e0q_A Thioredoxin; electron t 94.8 0.054 1.8E-06 36.6 5.5 57 153-211 1-57 (104)
168 1fb6_A Thioredoxin M; electron 94.8 0.08 2.7E-06 36.0 6.4 59 153-211 2-60 (105)
169 3die_A Thioredoxin, TRX; elect 94.8 0.071 2.4E-06 36.3 6.0 58 152-211 4-61 (106)
170 2dml_A Protein disulfide-isome 94.8 0.083 2.8E-06 37.7 6.6 59 151-210 17-76 (130)
171 1hyu_A AHPF, alkyl hydroperoxi 94.8 0.66 2.2E-05 41.7 14.0 93 115-211 62-158 (521)
172 2voc_A Thioredoxin; electron t 94.7 0.11 3.7E-06 36.3 7.0 57 153-211 3-59 (112)
173 1kng_A Thiol:disulfide interch 94.7 0.14 4.7E-06 37.5 7.8 101 45-147 41-149 (156)
174 1dby_A Chloroplast thioredoxin 94.6 0.075 2.6E-06 36.4 5.7 58 153-210 3-60 (107)
175 2i1u_A Thioredoxin, TRX, MPT46 94.4 0.11 3.9E-06 36.3 6.5 62 149-211 10-72 (121)
176 3kp9_A Vkorc1/thioredoxin doma 94.4 0.071 2.4E-06 44.9 6.1 85 36-148 189-278 (291)
177 3lwa_A Secreted thiol-disulfid 94.3 0.3 1E-05 37.0 9.3 102 45-147 58-178 (183)
178 3hz4_A Thioredoxin; NYSGXRC, P 94.3 0.1 3.5E-06 38.1 6.2 60 151-211 6-66 (140)
179 2b1k_A Thiol:disulfide interch 94.2 0.18 6.2E-06 37.6 7.7 101 44-147 49-157 (168)
180 3kcm_A Thioredoxin family prot 94.2 0.27 9.2E-06 35.8 8.5 104 45-148 27-141 (154)
181 2djj_A PDI, protein disulfide- 94.1 0.082 2.8E-06 37.1 5.2 59 151-210 7-71 (121)
182 3ha9_A Uncharacterized thiored 94.1 0.44 1.5E-05 35.2 9.6 101 45-148 36-162 (165)
183 1w4v_A Thioredoxin, mitochondr 94.0 0.12 4.1E-06 36.5 6.0 62 149-211 11-73 (119)
184 3hcz_A Possible thiol-disulfid 94.0 0.13 4.5E-06 37.0 6.4 101 45-146 30-142 (148)
185 1t00_A Thioredoxin, TRX; redox 93.9 0.14 4.8E-06 35.3 6.1 59 152-211 6-65 (112)
186 2o8v_B Thioredoxin 1; disulfid 93.9 0.17 5.8E-06 36.5 6.7 59 152-211 23-82 (128)
187 3aps_A DNAJ homolog subfamily 93.9 0.11 3.9E-06 36.5 5.7 59 152-211 4-63 (122)
188 3qou_A Protein YBBN; thioredox 93.9 0.1 3.5E-06 42.8 6.1 63 149-211 5-68 (287)
189 1xwb_A Thioredoxin; dimerizati 93.9 0.14 4.9E-06 34.7 6.0 58 153-210 2-61 (106)
190 3hxs_A Thioredoxin, TRXP; elec 93.9 0.14 4.7E-06 37.1 6.2 62 150-211 21-93 (141)
191 2lrn_A Thiol:disulfide interch 93.7 0.33 1.1E-05 35.5 8.1 99 45-147 28-138 (152)
192 1x5d_A Protein disulfide-isome 93.5 0.13 4.6E-06 36.6 5.5 60 151-211 7-71 (133)
193 3ph9_A Anterior gradient prote 93.4 0.1 3.5E-06 39.4 4.9 78 37-134 35-120 (151)
194 2dj1_A Protein disulfide-isome 93.4 0.12 4.2E-06 37.2 5.3 59 152-211 18-79 (140)
195 3p2a_A Thioredoxin 2, putative 93.2 0.18 6.2E-06 37.0 6.0 60 151-211 38-97 (148)
196 2l5l_A Thioredoxin; structural 93.1 0.2 6.9E-06 36.2 6.0 59 152-210 10-79 (136)
197 2pu9_C TRX-F, thioredoxin F-ty 93.0 0.33 1.1E-05 33.4 6.8 60 150-210 4-64 (111)
198 2dj3_A Protein disulfide-isome 93.0 0.11 3.7E-06 37.2 4.3 61 150-210 6-68 (133)
199 2dj0_A Thioredoxin-related tra 92.9 0.21 7.1E-06 36.2 5.9 62 150-211 6-69 (137)
200 1mek_A Protein disulfide isome 92.9 0.19 6.6E-06 34.7 5.5 59 152-211 8-69 (120)
201 3fkf_A Thiol-disulfide oxidore 92.9 0.84 2.9E-05 32.6 9.1 99 45-147 32-143 (148)
202 2dlx_A UBX domain-containing p 92.8 0.71 2.4E-05 34.8 8.9 87 40-147 36-133 (153)
203 2ppt_A Thioredoxin-2; thiredox 92.7 0.2 6.8E-06 37.5 5.6 58 153-211 49-106 (155)
204 3h79_A Thioredoxin-like protei 92.6 0.27 9.1E-06 35.0 6.0 62 150-211 14-80 (127)
205 1ep7_A Thioredoxin CH1, H-type 92.6 0.23 8E-06 34.1 5.5 58 153-211 4-66 (112)
206 3evi_A Phosducin-like protein 92.6 0.34 1.2E-05 34.8 6.5 59 150-209 2-62 (118)
207 2vlu_A Thioredoxin, thioredoxi 92.4 0.32 1.1E-05 34.1 6.1 62 149-211 11-75 (122)
208 3eur_A Uncharacterized protein 92.3 0.42 1.4E-05 34.5 6.9 98 46-147 31-142 (142)
209 3qfa_C Thioredoxin; protein-pr 92.3 0.19 6.5E-06 35.4 4.8 59 150-210 11-71 (116)
210 2hyx_A Protein DIPZ; thioredox 92.3 0.43 1.5E-05 41.1 7.8 102 45-147 81-196 (352)
211 1v98_A Thioredoxin; oxidoreduc 92.0 0.23 7.8E-06 36.0 5.1 60 151-211 33-92 (140)
212 1syr_A Thioredoxin; SGPP, stru 91.9 0.37 1.3E-05 33.3 5.9 60 149-210 7-66 (112)
213 2ywi_A Hypothetical conserved 91.9 0.56 1.9E-05 35.7 7.4 101 45-148 45-172 (196)
214 1r26_A Thioredoxin; redox-acti 91.9 0.32 1.1E-05 34.9 5.7 57 152-210 20-77 (125)
215 3dxb_A Thioredoxin N-terminall 91.6 0.49 1.7E-05 37.4 7.0 61 150-211 11-72 (222)
216 2rli_A SCO2 protein homolog, m 91.5 1.1 3.7E-05 33.1 8.6 101 45-147 25-161 (171)
217 3fw2_A Thiol-disulfide oxidore 91.3 1.5 5.1E-05 31.7 9.0 99 45-147 32-145 (150)
218 2qsi_A Putative hydrogenase ex 91.2 0.48 1.6E-05 35.3 6.0 62 145-209 12-75 (137)
219 1x5e_A Thioredoxin domain cont 91.1 0.36 1.2E-05 34.1 5.2 58 150-210 6-64 (126)
220 2vim_A Thioredoxin, TRX; thior 90.9 0.48 1.6E-05 31.8 5.5 56 154-210 2-59 (104)
221 3apq_A DNAJ homolog subfamily 90.9 0.37 1.3E-05 37.7 5.5 60 150-210 96-155 (210)
222 3d6i_A Monothiol glutaredoxin- 90.7 0.64 2.2E-05 31.9 6.1 57 153-210 2-63 (112)
223 1faa_A Thioredoxin F; electron 90.6 0.59 2E-05 32.8 6.0 61 149-210 16-77 (124)
224 1wou_A Thioredoxin -related pr 90.6 0.45 1.5E-05 33.7 5.4 59 151-209 5-71 (123)
225 3ewl_A Uncharacterized conserv 90.5 2.9 9.8E-05 29.6 9.8 100 45-148 26-139 (142)
226 1zma_A Bacterocin transport ac 90.5 0.63 2.2E-05 32.4 6.0 59 150-209 11-69 (118)
227 1gh2_A Thioredoxin-like protei 90.4 0.81 2.8E-05 31.1 6.4 57 153-211 3-62 (107)
228 4fo5_A Thioredoxin-like protei 90.4 2.3 7.7E-05 30.4 9.2 99 45-147 31-142 (143)
229 3uvt_A Thioredoxin domain-cont 90.4 0.5 1.7E-05 32.1 5.3 58 152-211 6-66 (111)
230 3s9f_A Tryparedoxin; thioredox 90.2 1.5 5E-05 32.7 8.2 87 45-132 47-145 (165)
231 1oaz_A Thioredoxin 1; immune s 90.1 0.28 9.6E-06 35.0 3.9 59 152-211 4-77 (123)
232 2lrt_A Uncharacterized protein 90.0 1.4 5E-05 32.1 7.9 95 45-141 34-139 (152)
233 2j23_A Thioredoxin; immune pro 89.9 0.57 1.9E-05 33.0 5.4 61 150-211 14-76 (121)
234 1i5g_A Tryparedoxin II; electr 89.6 2.4 8.3E-05 30.2 8.8 78 45-122 27-116 (144)
235 1o8x_A Tryparedoxin, TRYX, TXN 89.3 2.6 8.9E-05 30.2 8.8 78 45-122 27-116 (146)
236 2l57_A Uncharacterized protein 89.1 0.42 1.4E-05 33.8 4.1 39 170-208 27-65 (126)
237 3ul3_B Thioredoxin, thioredoxi 89.0 0.36 1.2E-05 34.4 3.8 60 150-210 24-83 (128)
238 3m9j_A Thioredoxin; oxidoreduc 89.0 0.7 2.4E-05 31.1 5.1 57 153-211 2-61 (105)
239 2cvb_A Probable thiol-disulfid 89.0 1.4 4.8E-05 33.3 7.3 102 45-148 32-157 (188)
240 2ggt_A SCO1 protein homolog, m 89.0 1.5 5.2E-05 31.9 7.4 101 45-147 22-158 (164)
241 2yj7_A LPBCA thioredoxin; oxid 88.6 0.077 2.6E-06 35.9 0.0 57 153-210 3-60 (106)
242 2f51_A Thioredoxin; electron t 88.9 0.92 3.2E-05 31.8 5.8 59 151-211 3-64 (118)
243 1jfu_A Thiol:disulfide interch 88.8 2.2 7.5E-05 32.0 8.3 104 45-148 59-178 (186)
244 2oe3_A Thioredoxin-3; electron 88.6 0.61 2.1E-05 32.6 4.7 58 151-210 12-70 (114)
245 2xc2_A Thioredoxinn; oxidoredu 88.4 1.1 3.7E-05 31.0 5.9 56 153-210 15-72 (117)
246 3f3q_A Thioredoxin-1; His TAG, 87.8 0.91 3.1E-05 31.2 5.1 54 155-210 11-64 (109)
247 3u5r_E Uncharacterized protein 87.4 1.6 5.4E-05 34.3 6.9 101 45-147 58-184 (218)
248 4euy_A Uncharacterized protein 87.2 0.62 2.1E-05 31.7 3.9 50 159-210 9-58 (105)
249 1ti3_A Thioredoxin H, PTTRXH1; 87.1 1.3 4.5E-05 30.1 5.6 57 153-210 6-66 (113)
250 1fo5_A Thioredoxin; disulfide 86.6 1.3 4.5E-05 28.4 5.1 41 171-211 4-44 (85)
251 2dbc_A PDCL2, unnamed protein 86.4 1.5 5.1E-05 31.6 5.8 61 149-210 8-70 (135)
252 2qgv_A Hydrogenase-1 operon pr 86.0 1.2 4.1E-05 33.2 5.1 57 152-209 18-77 (140)
253 2vm1_A Thioredoxin, thioredoxi 85.8 1.6 5.5E-05 29.9 5.5 57 152-210 7-68 (118)
254 1o73_A Tryparedoxin; electron 85.5 3.9 0.00013 29.0 7.7 78 45-122 27-116 (144)
255 1xfl_A Thioredoxin H1; AT3G510 85.1 2.1 7.3E-05 30.1 6.0 59 151-210 16-78 (124)
256 2es7_A Q8ZP25_salty, putative 84.5 0.9 3.1E-05 33.6 3.8 56 152-209 18-77 (142)
257 3emx_A Thioredoxin; structural 84.4 1.4 4.9E-05 31.6 4.9 53 152-209 17-69 (135)
258 3drn_A Peroxiredoxin, bacterio 84.2 6.7 0.00023 28.6 8.7 101 46-146 28-145 (161)
259 2wz9_A Glutaredoxin-3; protein 84.2 1.8 6.1E-05 31.8 5.4 59 150-210 11-72 (153)
260 1qgv_A Spliceosomal protein U5 84.1 2.2 7.5E-05 31.1 5.8 53 158-211 11-65 (142)
261 2av4_A Thioredoxin-like protei 83.3 2.2 7.6E-05 32.6 5.6 57 153-210 23-82 (160)
262 2l6c_A Thioredoxin; oxidoreduc 82.4 1.9 6.6E-05 29.5 4.7 53 154-209 6-58 (110)
263 1wjk_A C330018D20RIK protein; 81.9 9.1 0.00031 26.0 8.0 77 46-148 15-94 (100)
264 3gix_A Thioredoxin-like protei 81.8 2.1 7.1E-05 31.5 4.9 53 157-210 10-64 (149)
265 2trc_P Phosducin, MEKA, PP33; 81.7 2.8 9.6E-05 33.2 5.9 59 150-209 98-159 (217)
266 2e7p_A Glutaredoxin; thioredox 81.4 10 0.00035 25.8 8.6 58 37-118 11-77 (116)
267 1nho_A Probable thioredoxin; b 81.3 1.6 5.4E-05 28.0 3.7 40 172-211 4-43 (85)
268 1a0r_P Phosducin, MEKA, PP33; 81.0 4 0.00014 33.1 6.7 59 150-209 111-172 (245)
269 3zzx_A Thioredoxin; oxidoreduc 80.1 3.1 0.00011 28.7 5.1 56 154-210 3-60 (105)
270 2qc7_A ERP31, ERP28, endoplasm 78.9 4 0.00014 33.0 6.0 53 151-208 5-61 (240)
271 2c0g_A ERP29 homolog, windbeut 78.5 4 0.00014 33.2 5.9 55 150-209 15-74 (248)
272 1un2_A DSBA, thiol-disulfide i 76.6 3.2 0.00011 32.3 4.7 100 105-209 40-156 (197)
273 1wmj_A Thioredoxin H-type; str 73.6 1.7 5.7E-05 30.4 2.1 58 152-211 15-77 (130)
274 3cxg_A Putative thioredoxin; m 73.4 4.7 0.00016 28.7 4.6 58 151-210 20-79 (133)
275 2k6v_A Putative cytochrome C o 72.7 9.8 0.00033 27.6 6.4 102 45-147 34-170 (172)
276 3d22_A TRXH4, thioredoxin H-ty 72.7 7.5 0.00026 27.4 5.6 56 153-210 26-86 (139)
277 2lus_A Thioredoxion; CR-Trp16, 73.9 0.83 2.8E-05 32.5 0.0 28 45-72 25-55 (143)
278 2k8s_A Thioredoxin; dimer, str 70.5 4.4 0.00015 26.0 3.5 52 50-120 4-61 (80)
279 1xvw_A Hypothetical protein RV 70.2 11 0.00037 27.2 6.1 102 46-147 36-157 (160)
280 1ego_A Glutaredoxin; electron 69.1 10 0.00035 24.1 5.2 70 50-148 3-82 (85)
281 3gyk_A 27KDA outer membrane pr 68.4 32 0.0011 25.1 9.5 36 105-147 134-170 (175)
282 2vup_A Glutathione peroxidase- 68.2 25 0.00087 26.2 8.1 28 45-72 47-77 (190)
283 2b5x_A YKUV protein, TRXY; thi 68.2 8.6 0.00029 26.9 5.0 41 170-210 30-70 (148)
284 2bmx_A Alkyl hydroperoxidase C 66.8 22 0.00077 26.7 7.5 105 46-150 45-170 (195)
285 1we0_A Alkyl hydroperoxide red 65.2 22 0.00075 26.5 7.1 102 45-147 30-154 (187)
286 1zof_A Alkyl hydroperoxide-red 64.4 12 0.00042 28.3 5.5 102 46-148 33-159 (198)
287 3iv4_A Putative oxidoreductase 64.1 4.7 0.00016 28.8 2.8 58 154-214 9-67 (112)
288 2obi_A PHGPX, GPX-4, phospholi 63.8 21 0.00073 26.4 6.8 28 45-72 46-76 (183)
289 3qcp_A QSOX from trypanosoma b 63.3 8.3 0.00028 34.4 4.8 60 152-211 24-92 (470)
290 1ilo_A Conserved hypothetical 62.1 15 0.0005 22.7 4.8 34 175-208 5-38 (77)
291 2p5q_A Glutathione peroxidase 60.8 30 0.001 24.8 7.0 28 45-72 31-61 (170)
292 3fk8_A Disulphide isomerase; A 60.2 6.7 0.00023 27.5 3.1 40 170-209 30-71 (133)
293 3erw_A Sporulation thiol-disul 59.4 13 0.00046 25.7 4.6 41 170-210 35-76 (145)
294 1zzo_A RV1677; thioredoxin fol 58.9 12 0.00042 25.5 4.3 38 171-209 27-64 (136)
295 2l4c_A Endoplasmic reticulum r 58.4 14 0.00048 26.4 4.6 59 146-209 14-75 (124)
296 2h01_A 2-Cys peroxiredoxin; th 56.9 43 0.0015 24.9 7.5 104 45-148 30-157 (192)
297 2lja_A Putative thiol-disulfid 56.0 18 0.00063 25.4 5.0 41 171-211 32-73 (152)
298 1lu4_A Soluble secreted antige 55.7 17 0.0006 24.8 4.7 39 170-209 25-63 (136)
299 2i81_A 2-Cys peroxiredoxin; st 55.6 51 0.0017 25.3 7.9 101 46-148 52-178 (213)
300 3cmi_A Peroxiredoxin HYR1; thi 55.3 28 0.00095 25.4 6.0 28 45-72 31-60 (171)
301 1qmv_A Human thioredoxin perox 55.1 54 0.0018 24.5 7.8 104 45-148 33-161 (197)
302 3gl3_A Putative thiol:disulfid 54.8 20 0.00067 25.3 4.9 41 170-210 29-70 (152)
303 1z6n_A Hypothetical protein PA 54.6 19 0.00066 27.0 5.0 38 170-208 55-92 (167)
304 2v1m_A Glutathione peroxidase; 54.2 44 0.0015 23.8 6.9 28 45-72 30-60 (169)
305 2a4v_A Peroxiredoxin DOT5; yea 53.6 58 0.002 23.2 8.6 78 39-116 28-113 (159)
306 3kij_A Probable glutathione pe 53.3 60 0.002 23.8 7.7 28 45-72 37-67 (180)
307 1zye_A Thioredoxin-dependent p 52.8 64 0.0022 24.8 8.0 101 46-148 56-183 (220)
308 3ha9_A Uncharacterized thiored 52.6 23 0.0008 25.4 5.1 39 170-209 38-76 (165)
309 3or5_A Thiol:disulfide interch 52.6 20 0.00069 25.6 4.7 40 170-209 35-75 (165)
310 3fkf_A Thiol-disulfide oxidore 52.1 21 0.00071 24.8 4.7 40 171-210 35-76 (148)
311 2p31_A CL683, glutathione pero 51.5 69 0.0024 23.5 9.1 28 45-72 48-78 (181)
312 2lrn_A Thiol:disulfide interch 51.1 28 0.00096 24.6 5.3 40 171-210 31-71 (152)
313 3hd5_A Thiol:disulfide interch 51.1 18 0.00063 27.1 4.4 40 170-209 26-65 (195)
314 2lrt_A Uncharacterized protein 50.4 20 0.00069 25.7 4.4 41 171-211 37-78 (152)
315 2fwh_A Thiol:disulfide interch 49.4 29 0.001 24.2 5.1 60 150-210 10-74 (134)
316 2c0d_A Thioredoxin peroxidase 49.4 76 0.0026 24.6 8.0 101 46-148 56-182 (221)
317 3hcz_A Possible thiol-disulfid 49.2 20 0.00069 24.9 4.2 40 171-210 33-73 (148)
318 3kcm_A Thioredoxin family prot 48.9 28 0.00097 24.5 5.0 41 170-210 29-70 (154)
319 3hdc_A Thioredoxin family prot 48.8 28 0.00095 24.9 5.0 42 170-211 42-84 (158)
320 1uul_A Tryparedoxin peroxidase 48.6 41 0.0014 25.3 6.2 103 46-148 36-163 (202)
321 2l5o_A Putative thioredoxin; s 47.8 30 0.001 24.3 5.0 39 170-208 29-68 (153)
322 2k6v_A Putative cytochrome C o 47.2 27 0.00092 25.1 4.7 42 171-212 37-83 (172)
323 2ggt_A SCO1 protein homolog, m 47.1 28 0.00094 24.8 4.7 41 171-211 25-71 (164)
324 2kuc_A Putative disulphide-iso 46.9 16 0.00055 25.1 3.3 55 155-210 10-71 (130)
325 2cvb_A Probable thiol-disulfid 46.0 31 0.0011 25.5 5.0 41 170-210 34-74 (188)
326 1z6m_A Conserved hypothetical 45.9 26 0.0009 25.7 4.5 41 170-210 28-70 (175)
327 2b7k_A SCO1 protein; metalloch 45.9 73 0.0025 23.9 7.2 102 45-147 40-176 (200)
328 4evm_A Thioredoxin family prot 45.7 24 0.00082 23.9 4.0 37 171-207 24-60 (138)
329 2rli_A SCO2 protein homolog, m 45.6 38 0.0013 24.3 5.4 41 171-211 28-74 (171)
330 2ls5_A Uncharacterized protein 51.1 4.5 0.00015 29.3 0.0 28 45-72 32-63 (159)
331 1i5g_A Tryparedoxin II; electr 44.1 29 0.001 24.2 4.4 38 171-208 30-69 (144)
332 2pn8_A Peroxiredoxin-4; thiore 43.9 1E+02 0.0034 23.5 7.8 100 46-147 48-174 (211)
333 1n8j_A AHPC, alkyl hydroperoxi 43.9 96 0.0033 22.9 8.4 103 46-148 30-154 (186)
334 3fw2_A Thiol-disulfide oxidore 43.8 40 0.0014 23.7 5.2 39 171-209 35-77 (150)
335 1o8x_A Tryparedoxin, TRYX, TXN 43.6 30 0.001 24.3 4.4 38 171-208 30-69 (146)
336 2jsy_A Probable thiol peroxida 43.5 87 0.003 22.3 7.9 103 45-147 43-164 (167)
337 2f9s_A Thiol-disulfide oxidore 43.4 28 0.00097 24.5 4.2 39 171-209 28-67 (151)
338 1ego_A Glutaredoxin; electron 43.2 29 0.00098 21.8 3.9 36 173-209 3-38 (85)
339 2od5_A Hypothetical protein; m 43.0 41 0.0014 23.2 4.6 40 12-55 28-68 (116)
340 2f8a_A Glutathione peroxidase 42.1 1E+02 0.0035 23.5 7.6 81 45-147 46-204 (208)
341 1kte_A Thioltransferase; redox 41.7 66 0.0022 21.1 5.7 22 37-60 3-24 (105)
342 4g2e_A Peroxiredoxin; redox pr 41.6 61 0.0021 23.4 5.9 99 46-147 30-155 (157)
343 3lwa_A Secreted thiol-disulfid 41.5 25 0.00085 25.9 3.8 40 171-210 61-107 (183)
344 1o73_A Tryparedoxin; electron 41.4 34 0.0012 23.7 4.4 38 171-208 30-69 (144)
345 3hz8_A Thiol:disulfide interch 41.0 29 0.00098 26.3 4.1 39 171-209 26-64 (193)
346 3raz_A Thioredoxin-related pro 38.9 40 0.0014 23.7 4.5 40 170-209 25-65 (151)
347 1nm3_A Protein HI0572; hybrid, 37.8 1.4E+02 0.0047 23.0 11.9 98 46-147 33-164 (241)
348 3h93_A Thiol:disulfide interch 37.7 43 0.0015 24.9 4.6 38 170-207 26-63 (192)
349 1xvq_A Thiol peroxidase; thior 37.7 80 0.0027 23.0 6.2 78 45-123 43-137 (175)
350 3s9f_A Tryparedoxin; thioredox 37.5 40 0.0014 24.5 4.4 37 171-207 50-88 (165)
351 4gqc_A Thiol peroxidase, perox 37.0 45 0.0016 24.4 4.6 75 39-113 26-108 (164)
352 2p5q_A Glutathione peroxidase 36.9 49 0.0017 23.6 4.7 38 171-208 34-72 (170)
353 3lor_A Thiol-disulfide isomera 36.8 48 0.0016 23.4 4.6 39 170-208 31-71 (160)
354 2h30_A Thioredoxin, peptide me 36.5 41 0.0014 23.8 4.2 37 171-207 40-77 (164)
355 2rem_A Disulfide oxidoreductas 35.9 47 0.0016 24.6 4.6 39 171-209 27-65 (193)
356 1t3b_A Thiol:disulfide interch 34.8 36 0.0012 26.2 3.9 39 104-148 170-209 (211)
357 4fo5_A Thioredoxin-like protei 34.5 51 0.0018 22.9 4.4 39 171-209 34-73 (143)
358 2k8s_A Thioredoxin; dimer, str 34.4 35 0.0012 21.4 3.2 37 173-209 4-40 (80)
359 3ztl_A Thioredoxin peroxidase; 34.4 1.5E+02 0.0052 22.6 7.7 101 45-147 68-195 (222)
360 3dwv_A Glutathione peroxidase- 34.3 1.4E+02 0.0047 21.9 8.7 28 45-72 45-75 (187)
361 3gv1_A Disulfide interchange p 34.0 27 0.00091 25.6 2.8 40 104-149 98-138 (147)
362 3qpm_A Peroxiredoxin; oxidored 33.1 1.7E+02 0.0059 22.8 8.4 102 45-148 76-204 (240)
363 3gyk_A 27KDA outer membrane pr 32.8 60 0.0021 23.5 4.7 38 170-208 23-60 (175)
364 2lst_A Thioredoxin; structural 38.6 9.5 0.00032 26.5 0.0 39 171-209 21-62 (130)
365 2v1m_A Glutathione peroxidase; 31.9 66 0.0023 22.8 4.7 38 171-208 33-71 (169)
366 3ia1_A THIO-disulfide isomeras 31.7 46 0.0016 23.4 3.7 37 170-208 31-67 (154)
367 2p31_A CL683, glutathione pero 31.7 65 0.0022 23.7 4.7 38 171-208 51-89 (181)
368 3tjj_A Peroxiredoxin-4; thiore 31.6 1.7E+02 0.0057 23.2 7.5 100 46-147 91-217 (254)
369 1xzo_A BSSCO, hypothetical pro 31.5 47 0.0016 23.8 3.9 40 171-210 35-78 (174)
370 3cmi_A Peroxiredoxin HYR1; thi 30.8 75 0.0025 22.9 4.9 36 171-207 34-70 (171)
371 3eyt_A Uncharacterized protein 30.7 67 0.0023 22.5 4.5 38 171-208 30-69 (158)
372 1v58_A Thiol:disulfide interch 30.5 44 0.0015 26.3 3.8 44 104-149 188-232 (241)
373 2znm_A Thiol:disulfide interch 30.1 62 0.0021 24.0 4.4 39 170-208 23-61 (195)
374 2ywi_A Hypothetical conserved 30.1 52 0.0018 24.2 3.9 39 172-210 49-88 (196)
375 2vup_A Glutathione peroxidase- 29.4 71 0.0024 23.6 4.6 37 171-207 50-87 (190)
376 3gkn_A Bacterioferritin comigr 29.3 1.5E+02 0.0051 20.8 8.7 102 46-147 35-159 (163)
377 1jfu_A Thiol:disulfide interch 29.0 78 0.0027 23.0 4.8 38 171-208 62-100 (186)
378 1kng_A Thiol:disulfide interch 28.0 45 0.0015 23.3 3.1 36 171-208 44-79 (156)
379 3gn3_A Putative protein-disulf 27.8 54 0.0019 24.7 3.7 41 170-210 15-56 (182)
380 3uma_A Hypothetical peroxiredo 27.7 1.9E+02 0.0065 21.5 8.5 75 39-114 50-136 (184)
381 3l9v_A Putative thiol-disulfid 27.4 32 0.0011 26.0 2.3 40 171-210 16-58 (189)
382 2obi_A PHGPX, GPX-4, phospholi 27.1 87 0.003 22.9 4.7 38 171-208 49-87 (183)
383 3ixr_A Bacterioferritin comigr 26.4 1.9E+02 0.0064 21.0 7.6 99 46-146 51-174 (179)
384 3a2v_A Probable peroxiredoxin; 25.6 1.7E+02 0.006 23.2 6.6 108 40-147 27-159 (249)
385 2pwj_A Mitochondrial peroxired 25.5 1.9E+02 0.0065 21.0 6.4 34 39-72 37-74 (171)
386 2wfc_A Peroxiredoxin 5, PRDX5; 25.1 2E+02 0.0068 20.9 7.5 74 39-114 25-111 (167)
387 1q98_A Thiol peroxidase, TPX; 25.1 1.9E+02 0.0064 20.6 8.3 78 46-123 43-138 (165)
388 3kij_A Probable glutathione pe 24.9 1.1E+02 0.0039 22.1 5.1 37 171-207 40-77 (180)
389 3dwv_A Glutathione peroxidase- 24.8 78 0.0027 23.4 4.1 38 171-208 48-88 (187)
390 1sen_A Thioredoxin-like protei 24.6 21 0.00071 26.3 0.7 36 171-206 48-83 (164)
391 3u5r_E Uncharacterized protein 24.1 77 0.0026 24.2 4.0 38 172-209 62-100 (218)
392 2in3_A Hypothetical protein; D 23.7 1.1E+02 0.0039 22.8 4.9 42 104-147 165-207 (216)
393 2gs3_A PHGPX, GPX-4, phospholi 23.5 1.2E+02 0.004 22.2 4.9 37 171-207 51-88 (185)
394 2b7k_A SCO1 protein; metalloch 22.3 1.1E+02 0.0039 22.8 4.6 41 171-211 43-88 (200)
395 2jsy_A Probable thiol peroxida 22.3 83 0.0028 22.5 3.7 37 171-208 46-83 (167)
396 3gmf_A Protein-disulfide isome 20.7 1.3E+02 0.0045 23.0 4.8 40 170-209 16-58 (205)
397 1tp9_A Peroxiredoxin, PRX D (t 20.3 2.4E+02 0.0081 20.0 8.6 69 45-114 34-115 (162)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.97 E-value=1.6e-29 Score=222.51 Aligned_cols=186 Identities=18% Similarity=0.268 Sum_probs=170.2
Q ss_pred CCCcccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHh-CCCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEec
Q psy7942 3 SCLPGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIA-DSKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDAS 80 (216)
Q Consensus 3 ~g~~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~ 80 (216)
+|.+.+|.|+|++++|++|+.++++|++..+++.++++++++ ++++++|+||.+++++.++.|.++|..+ +++.|+
T Consensus 100 ~G~~~~y~G~~~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F~-- 177 (367)
T 3us3_A 100 EDEVIEYDGEFSADTLVEFLLDVLEDPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFF-- 177 (367)
T ss_dssp TTEEEECCSCCSHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTSCEE--
T ss_pred CCcEEEeCCCCCHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHHHHHHHHhhcCCcEEE--
Confidence 688889999999999999999999999999999999999999 7899999999999999999999999998 789999
Q ss_pred chhhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEecCCCCcccccCC-CCCHHHHHHHHhhcCCCceeeeCcc
Q psy7942 81 SELAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFKKFDEGRVNYEGP-ASDEAALRKFLSTQSLPLVVEFNHE 159 (216)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~~~de~~~~y~G~-~~~~~~l~~fi~~~~~P~v~~~~~~ 159 (216)
.+.+++++++|+++.|+|++|+++++.+..|+|. + +.++|.+||..+++|+|+++|.+
T Consensus 178 --------------------~~~~~~~~~~~~v~~p~i~lf~~~~~~~~~y~g~~~-~~~~l~~fi~~~~~p~v~elt~~ 236 (367)
T 3us3_A 178 --------------------ATFDSKVAKKLTLKLNEIDFYEAFMEEPVTIPDKPN-SEEEIVNFVEEHRRSTLRKLKPE 236 (367)
T ss_dssp --------------------EECCHHHHHHHTCCTTCEEEECTTCSSCEECSSSSC-CHHHHHHHHHHTCSCSEEECCGG
T ss_pred --------------------EECCHHHHHHcCCCCCeEEEEcCCCCCCeecCCCCC-CHHHHHHHHHHcCccceeecChh
Confidence 8889999999999999999999988888999996 7 99999999999999999999999
Q ss_pred hHHHhhccCCc-ceEEEEEeCCccchhhhhHHHHHHHHhccC--ceEEEEcCCCC
Q psy7942 160 TAQKIFGGEIK-SHLLVFFSKAAGHYESHFEPVQTVAKDFRE--KEEQDEDDDQP 211 (216)
Q Consensus 160 ~~~~~~~~~~~-~~lllf~~~~~~~~~~~~~~l~~vA~~~r~--~~~f~~~d~~~ 211 (216)
++..++.+.+. +++++|++.+.+++.++++.|+++|++|++ +++|+|+|...
T Consensus 237 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~~ 291 (367)
T 3us3_A 237 SMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPDD 291 (367)
T ss_dssp GHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGGG
T ss_pred hHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCcc
Confidence 99888876433 567778876666678999999999999999 79999999754
No 2
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.95 E-value=2.7e-27 Score=206.46 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=167.6
Q ss_pred CCCcccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHh-CCCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEec
Q psy7942 3 SCLPGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIA-DSKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDAS 80 (216)
Q Consensus 3 ~g~~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~ 80 (216)
+|.+..|.|+|++++|++|+.++++|++..|++.++++++++ ++++++|+||++++++.++.|.++|..+ +++.|+
T Consensus 98 ~g~~~~~~G~~~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f~-- 175 (350)
T 1sji_A 98 GDRTIEFDGEFAADVLVEFLLDLIEDPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFF-- 175 (350)
T ss_dssp TTEEEEECSCCCHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHHHHHHHHHHTTTTSEEE--
T ss_pred CCcEEEecCCCCHHHHHHHHHHhcCCcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHHHHHHHHHhhccCcEEE--
Confidence 677889999999999999999999999999999999999998 8889999999998999999999999998 899999
Q ss_pred chhhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEecCCCCcccccCC-CCCHHHHHHHHhhcCCCceeeeCcc
Q psy7942 81 SELAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFKKFDEGRVNYEGP-ASDEAALRKFLSTQSLPLVVEFNHE 159 (216)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~~~de~~~~y~G~-~~~~~~l~~fi~~~~~P~v~~~~~~ 159 (216)
.+.+++++++++++.|+|++|+++++.+..|+|+ + +.++|.+||..++.|+++++|.+
T Consensus 176 --------------------~~~~~~~~~~~~v~~p~i~~~~~~~~~~~~y~g~~~-~~~~l~~fi~~~~~p~v~elt~~ 234 (350)
T 1sji_A 176 --------------------ATFDKGVAKKLSLKMNEVDFYEPFMDEPIAIPDKPY-TEEELVEFVKEHQRPTLRRLRPE 234 (350)
T ss_dssp --------------------EECCHHHHHHHTCCTTCEEEECTTCSSCEECSSSSC-CHHHHHHHHHHHCCCSEEECCTT
T ss_pred --------------------EECCHHHHHHcCCCCCcEEEEeCCCCCceecCCCCC-CHHHHHHHHHHcCccchhhcChh
Confidence 8888999999999999999999987888999998 7 99999999999999999999999
Q ss_pred hHHHhhccCC-cceEEEEEeCCccchhhhhHHHHHHHHhccC--ceEEEEcCCC
Q psy7942 160 TAQKIFGGEI-KSHLLVFFSKAAGHYESHFEPVQTVAKDFRE--KEEQDEDDDQ 210 (216)
Q Consensus 160 ~~~~~~~~~~-~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~--~~~f~~~d~~ 210 (216)
++..+++.+. +.++++|.+.+..+...+++.++++|++|++ ++.|+|+|..
T Consensus 235 ~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~~ 288 (350)
T 1sji_A 235 DMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDPD 288 (350)
T ss_dssp THHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECGG
T ss_pred hHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECch
Confidence 9999998765 4556667665544467899999999999997 8999999965
No 3
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.95 E-value=2.6e-27 Score=195.23 Aligned_cols=159 Identities=28% Similarity=0.450 Sum_probs=146.6
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHHH
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADIL 108 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~ 108 (216)
.+..|++.+++++|++++++++||||++++++++++|.++|..++++.|+ +|.+++++
T Consensus 10 ~~~~l~s~~~~~~~l~~~~v~vVgff~~~~~~~~~~f~~~A~~l~~~~F~----------------------~t~~~~v~ 67 (227)
T 4f9z_D 10 EPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFG----------------------ISTDSEVL 67 (227)
T ss_dssp CCEECCSHHHHHHHHHTSSEEEEEECSCSCSTHHHHHHHHTTTCTTSEEE----------------------EECCHHHH
T ss_pred CCeeeCCHHHHHHHHhcCCeEEEEEecCCCchhHHHHHHHHHhCCCceEE----------------------EECCHHHH
Confidence 45789999999999999999999999999999999999999999999999 89999999
Q ss_pred HhcCCCCCeEEEEecCCCCcccccC----CCCCHHHHHHHHhhcCCCceeeeCcchHHHhhccCCcceEEEEEeCCccch
Q psy7942 109 AEYSVDDDTVAIFKKFDEGRVNYEG----PASDEAALRKFLSTQSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHY 184 (216)
Q Consensus 109 ~~~~v~~p~i~~~~~~de~~~~y~G----~~~~~~~l~~fi~~~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~ 184 (216)
+++++++|+|++||++++.+..|+| ++ +.++|.+||+.+++|+|+++|.+|+..+++.+++.++++|.+.+.+++
T Consensus 68 ~~~~v~~p~i~lfk~~~~~~~~~~~~~~g~~-~~~~l~~fi~~~~~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~ 146 (227)
T 4f9z_D 68 THYNITGNTICLFRLVDNEQLNLEDEDIESI-DATKLSRFIEINSLHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEY 146 (227)
T ss_dssp HHTTCCSSEEEEEETTTTEEEEECHHHHHTC-CHHHHHHHHHHHCCCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTH
T ss_pred HHcCCCCCeEEEEEecCcccccccccccCCC-CHHHHHHHHHHhCCCceeecCcccHHHHhccCCceEEEEEEcCCcchH
Confidence 9999999999999998877788985 78 999999999999999999999999999999887766666777766778
Q ss_pred hhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 185 ESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 185 ~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.++++.++++|++||++++|+|+|..
T Consensus 147 ~~~~~~~~~vAk~~k~~i~F~~vd~~ 172 (227)
T 4f9z_D 147 EENMHRYQKAAKLFQGKILFILVDSG 172 (227)
T ss_dssp HHHHHHHHHHHHHTTTTCEEEEEETT
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCc
Confidence 89999999999999999999999974
No 4
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.94 E-value=3.7e-26 Score=191.05 Aligned_cols=161 Identities=19% Similarity=0.357 Sum_probs=141.3
Q ss_pred hhCCCceeecCHHHHHHhHhC-CCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 25 KTGPPAKEFTSVDEIKAFIAD-SKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 25 ~~~~~v~~l~s~~~~~~~~~~-~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
++||+|+.|++.+++++|+++ +++++||||++++++.+++|.++|..+ +++.|+ +|
T Consensus 3 ~~gP~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~----------------------~t 60 (250)
T 3ec3_A 3 LGSPPSKEILTLKQVQEFLKDGDDVVILGVFQGVGDPGYLQYQDAANTLREDYKFH----------------------HT 60 (250)
T ss_dssp --CCSSEECCCHHHHHHHHHHCSSCEEEEECSCTTCHHHHHHHHHHHHHTTTCCEE----------------------EE
T ss_pred CCCCCceecCCHHHHHHHHhcCCCeEEEEEEcCCCchHHHHHHHHHHhhhcCcEEE----------------------EE
Confidence 679999999999999999998 999999999999999999999999998 899999 99
Q ss_pred ccHHHHHhcCCCCCeEEEEec------CCCCcccccC--CCCCHHHHHHHHhhcCCCceeeeCcchHHHhhccCCcceEE
Q psy7942 103 TNADILAEYSVDDDTVAIFKK------FDEGRVNYEG--PASDEAALRKFLSTQSLPLVVEFNHETAQKIFGGEIKSHLL 174 (216)
Q Consensus 103 ~~~~v~~~~~v~~p~i~~~~~------~de~~~~y~G--~~~~~~~l~~fi~~~~~P~v~~~~~~~~~~~~~~~~~~~ll 174 (216)
.+++++++++++.|+|++||+ +++....|+| ++ +.++|.+||..+++|+|+++|.+|+..++. + .+.++
T Consensus 61 ~~~~v~~~~~v~~p~ivlfk~~~~~~kfde~~~~y~g~~~~-~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~-~-~~l~~ 137 (250)
T 3ec3_A 61 FSTEIAKFLKVSLGKLVLMQPEKFQSKYEPRMHVMDVQGST-EASAIKDYVVKHALPLVGHRKTSNDAKRYS-K-RPLVV 137 (250)
T ss_dssp CCHHHHHHHTCCSSEEEEECCGGGCCTTSCSCEEEECCTTS-CHHHHHHHHHHHSSCTEEEECTTTHHHHSC-S-SSEEE
T ss_pred CcHHHHHHcCCCCCeEEEEecchhhccccccceeccCCCCC-CHHHHHHHHHHcCCCceeecCccchhhhhc-c-CccEE
Confidence 999999999999999999995 5777899994 78 999999999999999999999999999885 4 34455
Q ss_pred EEEeCC-----ccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 175 VFFSKA-----AGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 175 lf~~~~-----~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+|+..+ .+.++.+++.++++|++|| +++|+|+|...
T Consensus 138 ~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~ 178 (250)
T 3ec3_A 138 VYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED 178 (250)
T ss_dssp EEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT
T ss_pred EEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH
Confidence 666432 2345679999999999999 99999998654
No 5
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.93 E-value=2.3e-25 Score=186.23 Aligned_cols=162 Identities=20% Similarity=0.380 Sum_probs=139.7
Q ss_pred hhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 24 KKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 24 ~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
+++||+++.|++.+++++|++++++++||||.+++++.+++|.++|..+ +++.|+ +|
T Consensus 2 ~~~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~----------------------~~ 59 (252)
T 2h8l_A 2 PLGSPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA----------------------HT 59 (252)
T ss_dssp ----CCEEECCSHHHHHHHHTSSSCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEE----------------------EE
T ss_pred CcCCCCceeecCHHHHHHHhhcCCeEEEEEECCCCChHHHHHHHHHHhcccCcEEE----------------------EE
Confidence 6889999999999999999999999999999999999999999999999 899999 88
Q ss_pred ccHHHHHhcCCCCCeEEEEec------CCCCcccc-cCCCCCHHHHHHHHhhcCCCceeeeCcchHHHhhccCCcceEEE
Q psy7942 103 TNADILAEYSVDDDTVAIFKK------FDEGRVNY-EGPASDEAALRKFLSTQSLPLVVEFNHETAQKIFGGEIKSHLLV 175 (216)
Q Consensus 103 ~~~~v~~~~~v~~p~i~~~~~------~de~~~~y-~G~~~~~~~l~~fi~~~~~P~v~~~~~~~~~~~~~~~~~~~lll 175 (216)
.+++++++++++.|+|++||+ +++....| +|++ +.++|.+||..+++|+|+++|.+|+..+++.+ .+++
T Consensus 60 ~~~~v~~~~~~~~p~i~~fk~~~~~~kf~e~~~~y~~g~~-~~~~l~~fi~~~~~Plv~e~t~~n~~~~~~~~---~~v~ 135 (252)
T 2h8l_A 60 NVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKM-TSGKIKKFIQENIFGICPHMTEDNKDLIQGKD---LLIA 135 (252)
T ss_dssp CCHHHHHHHCSSSEEEEEECCGGGCCTTSCSEEECCCSSC-CHHHHHHHHHHHSSCSSCEECTTTHHHHSSSS---EEEE
T ss_pred ChHHHHHHhCCCCCcEEEEcchhhcccccccccccCCCCc-CHHHHHHHHHhcccCCeeecccccHhhhcCCC---eEEE
Confidence 899999999999999999995 56778899 9999 99999999999999999999999999886543 3455
Q ss_pred EEeCCcc----chhhhhHHHHHHHHhccCc---eEEEEcCCCC
Q psy7942 176 FFSKAAG----HYESHFEPVQTVAKDFREK---EEQDEDDDQP 211 (216)
Q Consensus 176 f~~~~~~----~~~~~~~~l~~vA~~~r~~---~~f~~~d~~~ 211 (216)
|+..+.. ..+.+++.++++|++|+++ ++|+|+|...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~ 178 (252)
T 2h8l_A 136 YYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKT 178 (252)
T ss_dssp EECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTT
T ss_pred EeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHH
Confidence 6543221 2346899999999999988 9999999754
No 6
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.93 E-value=5.6e-25 Score=191.83 Aligned_cols=164 Identities=37% Similarity=0.639 Sum_probs=151.9
Q ss_pred hhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 24 KKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 24 ~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
....+++..|++.+++++|++++++++||||.+.+++..+.|.++|..++++.|+ +|.
T Consensus 13 ~~~~~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~~~~f~~~A~~~~~~~F~----------------------~t~ 70 (361)
T 3uem_A 13 GPGSEFATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFG----------------------ITS 70 (361)
T ss_dssp CCCCSSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHHHHHHHHHHHHCSSSCEE----------------------EEC
T ss_pred CCccccceecCCHHHHHHHHhcCCcEEEEEEcCCCchHHHHHHHHHhcCCCceEE----------------------EEC
Confidence 3345678899999999999999999999999998889999999999999999999 999
Q ss_pred cHHHHHhcCCCCCeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeCcchHHHhhccCCcceEEEEEeCCccc
Q psy7942 104 NADILAEYSVDDDTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGH 183 (216)
Q Consensus 104 ~~~v~~~~~v~~p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~ 183 (216)
+++++++++++.|+|++||++++.+..|+|++ +.++|.+||+.+..|++++++.+++..++..+.+.++++|+..++++
T Consensus 71 ~~~v~~~~~v~~~~i~lfk~f~~~~~~~~g~~-~~~~i~~fi~~~~~p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~ 149 (361)
T 3uem_A 71 NSDVFSKYQLDKDGVVLFKKFDEGRNNFEGEV-TKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSD 149 (361)
T ss_dssp CHHHHHHTTCSSSEEEEEESSTTSEEECCSCC-CHHHHHHHHHHHSSCSEEECSTTTHHHHHSCSCCEEEEEECCSSSSS
T ss_pred cHHHHHHhCCCCCeEEEEEecCCCccccCCcC-CHHHHHHHHHHcCCCcceecCcccHHHHhcCCCCcEEEEEEeCCchh
Confidence 99999999999999999999999899999999 99999999999999999999999999999987666677788888788
Q ss_pred hhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 184 YESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 184 ~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.++...++++|++|+++++|+++|-.
T Consensus 150 ~~~~~~~~~~~A~~~~~~i~f~~vd~~ 176 (361)
T 3uem_A 150 YDGKLSNFKTAAESFKGKILFIFIDSD 176 (361)
T ss_dssp HHHHHHHHHHHHGGGTTTCEEEEECTT
T ss_pred HHHHHHHHHHHHHHccCceEEEEecCC
Confidence 999999999999999999999999865
No 7
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.91 E-value=1.7e-23 Score=189.10 Aligned_cols=184 Identities=23% Similarity=0.410 Sum_probs=161.2
Q ss_pred CC-CcccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEec
Q psy7942 3 SC-LPGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDAS 80 (216)
Q Consensus 3 ~g-~~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~ 80 (216)
+| .+..|.|+|++++|++|+.++++|++..+.+.++++++++.+++++||||.+.+++....|.++|..+ +++.|+
T Consensus 84 ~g~~~~~~~G~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~~~~~~F~-- 161 (481)
T 3f8u_A 84 DGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFA-- 161 (481)
T ss_dssp TTEEEEECCSCSSHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHHTTTSCEE--
T ss_pred CCceeeeecCccCHHHHHHHHHhhcccCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHhccCceEE--
Confidence 45 46799999999999999999999999999999999999999999999999988999999999999998 899999
Q ss_pred chhhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEe------cCCCCccccc-CCCCCHHHHHHHHhhcCCCce
Q psy7942 81 SELAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFK------KFDEGRVNYE-GPASDEAALRKFLSTQSLPLV 153 (216)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~------~~de~~~~y~-G~~~~~~~l~~fi~~~~~P~v 153 (216)
++.+++++++++++.+.|++|+ ++++....|+ |.+ +.+.|.+||..+++|++
T Consensus 162 --------------------~~~~~~~~~~~~v~~~~i~~~~p~~~~~~~~~~~~~y~~~~~-~~~~l~~fi~~~~~p~v 220 (481)
T 3f8u_A 162 --------------------HTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKM-TSGKIKKFIQENIFGIC 220 (481)
T ss_dssp --------------------EECCHHHHHHHCSSSEEEEEECCGGGCBTTBCSEEECCCSSC-CHHHHHHHHHHHTTTTS
T ss_pred --------------------EECCHHHHHHhCCCCCcEEEEecccccCccCCcccccCCCCC-CHHHHHHHHHHhCCCCc
Confidence 8999999999999988899999 6677788999 777 99999999999999999
Q ss_pred eeeCcchHHHhhccCCcceEEEEEeCCccc----hhhhhHHHHHHHHhccCc---eEEEEcCCCCC
Q psy7942 154 VEFNHETAQKIFGGEIKSHLLVFFSKAAGH----YESHFEPVQTVAKDFREK---EEQDEDDDQPK 212 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~lllf~~~~~~~----~~~~~~~l~~vA~~~r~~---~~f~~~d~~~~ 212 (216)
+++|.+|+..+++.+ .+++|+..+... .+.+.+.++++|++|+++ ++|+|+|....
T Consensus 221 ~e~t~~n~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~ 283 (481)
T 3f8u_A 221 PHMTEDNKDLIQGKD---LLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTF 283 (481)
T ss_dssp CEECTTTHHHHTTSS---EEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTT
T ss_pred cccChhHHHHhcCCC---ceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHH
Confidence 999999999988643 345555433221 233688999999999998 99999997543
No 8
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.87 E-value=1.3e-21 Score=172.61 Aligned_cols=184 Identities=19% Similarity=0.292 Sum_probs=137.2
Q ss_pred CCCcc--cCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEe
Q psy7942 3 SCLPG--ERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDA 79 (216)
Q Consensus 3 ~g~~~--~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~ 79 (216)
+|... +|.|+|++++|++|+.+++++++..+++.++++. +..++.++|+||.+.+++.++.|.++|..+ +++.|+
T Consensus 91 ~G~~~~~~~~G~~~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~~~~~f~~~A~~~~~~~~F~- 168 (382)
T 2r2j_A 91 NGMMMKREYRGQRSVKALADYIRQQKSDPIQEIRDLAEITT-LDRSKRNIIGYFEQKDSDNYRVFERVANILHDDCAFL- 168 (382)
T ss_dssp TTEEEEEECCSCCSHHHHHHHHHHHHSCCCEEC-------------CCEEEEEESCSSSHHHHHHHHHHHHHTTTCEEE-
T ss_pred CCcEeeeeecCcchHHHHHHHHHHhccCCceecCCHHHHHH-hcCCCCEEEEEECCCCChhHHHHHHHHHHhhccceEE-
Confidence 56654 6999999999999999999999999998888988 678888999999998888999999999998 889999
Q ss_pred cchhhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEecC--CCCcccccCCCCCHHHHHHHHhhcCCCceeeeC
Q psy7942 80 SSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFKKF--DEGRVNYEGPASDEAALRKFLSTQSLPLVVEFN 157 (216)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~~~--de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~ 157 (216)
.+.+ +++++++++.+. ++|++. ++....|+|++++.++|.+||..+.+|+++++|
T Consensus 169 ---------------------~~~~-~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt 225 (382)
T 2r2j_A 169 ---------------------SAFG-DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVPLVREIT 225 (382)
T ss_dssp ---------------------EEES-CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSCSSEECC
T ss_pred ---------------------EEeh-hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccCceEecC
Confidence 6655 577888887533 666665 235688999976899999999999999999999
Q ss_pred cchHHHhhccCCcceEEEEEeCCc-cchhhhhHHHHHHHHhccCceEEEEcCCCCC
Q psy7942 158 HETAQKIFGGEIKSHLLVFFSKAA-GHYESHFEPVQTVAKDFREKEEQDEDDDQPK 212 (216)
Q Consensus 158 ~~~~~~~~~~~~~~~lllf~~~~~-~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~~ 212 (216)
.+++..+++.+. +.+++|++.+. +..+.+++.+.++|.+++++++|+|+|....
T Consensus 226 ~~~~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~id~~~~ 280 (382)
T 2r2j_A 226 FENGEELTEEGL-PFLILFHMKEDTESLEIFQNEVARQLISEKGTINFLHADCDKF 280 (382)
T ss_dssp HHHHHHHHTTCC-CEEEEEECTTCCHHHHHHHHHHHHHTGGGTTTSEEEEEETTTT
T ss_pred hhhHHHHhcCCC-cEEEEEecCCchHHHHHHHHHHHHHHHHhCCeeEEEEEchHHh
Confidence 999999998774 44566776543 3356677888889999999999999997643
No 9
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.83 E-value=1.5e-20 Score=170.93 Aligned_cols=172 Identities=20% Similarity=0.304 Sum_probs=148.3
Q ss_pred cccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCCC--eEEEEEecCCChhHHHHHHHHHhhC-CCceEEecch
Q psy7942 6 PGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADSK--VVVAGLFKDASSELAKTFNEIASKV-DDLVFDASSE 82 (216)
Q Consensus 6 ~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~--v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~~~ 82 (216)
+..|.|+|++++|++|+.++++|++..+++ +++|++.++ +++|+||.+.++.....|..+|..+ +++.|+
T Consensus 101 ~~~~~G~~~~~~l~~~l~~~~~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~~~f~~~A~~~~~~~~F~---- 173 (504)
T 2b5e_A 101 SIDYEGPRTAEAIVQFMIKQSQPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFNDYDFV---- 173 (504)
T ss_dssp EEECCSCCSHHHHHHHHHHHTSCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHHHHHHHHHHHTTTTCEEE----
T ss_pred ceeecCCCCHHHHHHHHHHhcCCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHHHHHHHHHHHhhcCcEEE----
Confidence 779999999999999999999999999988 888998888 9999999988889999999999999 899999
Q ss_pred hhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEecCCCCcccccCC-CC--CHHHHHHHHhhcCCCceeeeCcc
Q psy7942 83 LAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFKKFDEGRVNYEGP-AS--DEAALRKFLSTQSLPLVVEFNHE 159 (216)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~~~de~~~~y~G~-~~--~~~~l~~fi~~~~~P~v~~~~~~ 159 (216)
.+. +++++++++ |++|++++ .+..|+|+ +. +.+.|.+||..+.+|+++++|.+
T Consensus 174 ------------------~~~--~~~~~~~~~---i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~~~t~~ 229 (504)
T 2b5e_A 174 ------------------SAE--NADDDFKLS---IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFGEIDGS 229 (504)
T ss_dssp ------------------EEE--CTTSCCEEE---EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSCBCCHH
T ss_pred ------------------EEH--HHHHhcCCe---EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcccCCHh
Confidence 665 577777765 88999876 67889998 42 78999999999999999999999
Q ss_pred hHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 160 TAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 160 ~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
++..+++.+.+ .+++|++.+ +..+.+.+.++++|++|+++++|+|+|..
T Consensus 230 ~~~~~~~~~~~-~~~l~~~~~-~~~~~~~~~l~~~a~~~~~~i~F~~id~~ 278 (504)
T 2b5e_A 230 VFAQYVESGLP-LGYLFYNDE-EELEEYKPLFTELAKKNRGLMNFVSIDAR 278 (504)
T ss_dssp HHHHHHHTTSC-EEEEEESSH-HHHHHHHHHHHHHHHHTTTTCEEEEEEHH
T ss_pred HHHHHhcCCCc-EEEEEecCc-ccHHHHHHHHHHHHHhcCCeeEEEEEehh
Confidence 99999988753 344455432 33478999999999999999999999953
No 10
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=99.80 E-value=1.9e-19 Score=135.59 Aligned_cols=107 Identities=25% Similarity=0.474 Sum_probs=99.4
Q ss_pred HHHhhhCCCcee--ecCHHHHHHhHhCCCeEEEEEecCCChhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccce
Q psy7942 21 WLLKKTGPPAKE--FTSVDEIKAFIADSKVVVAGLFKDASSELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLV 98 (216)
Q Consensus 21 ~l~~~~~~~v~~--l~s~~~~~~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~ 98 (216)
-|++++||++.. |++.+++++|++++++++||||++++++.++.|.++|..++++.|+
T Consensus 12 ~m~kq~gP~~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~~~~F~~~A~~~~d~~F~-------------------- 71 (124)
T 2l4c_A 12 KSSDGPGAAQEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPAVPILHSMVQKFPGVSFG-------------------- 71 (124)
T ss_dssp SSCCCSCCSCCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTHHHHHHHHHHHCTTSEEE--------------------
T ss_pred HHHhccCCCCcceEcCCHHHHHHHHhcCCCEEEEEECCCCChhHHHHHHHHHhCCCceEE--------------------
Confidence 367899999865 9999999999999999999999999999999999999999999999
Q ss_pred eeecccHHHHHhcCCCCCeEEEEecCCCCcccccC----CCCCHHHHHHHHhhcCC
Q psy7942 99 FVTSTNADILAEYSVDDDTVAIFKKFDEGRVNYEG----PASDEAALRKFLSTQSL 150 (216)
Q Consensus 99 ~~~t~~~~v~~~~~v~~p~i~~~~~~de~~~~y~G----~~~~~~~l~~fi~~~~~ 150 (216)
+|.+++++++++++.|+|++||++++.+..|+| ++ +.++|.+||..+++
T Consensus 72 --~t~~~~v~~~~~v~~~~vvlfkkfde~~~~~~g~~~~~~-~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 72 --ISTDSEVLTHYNITGNTICLFRLVDNEQLNLEDEDIESI-DATKLSRFIEINSL 124 (124)
T ss_dssp --EECCHHHHHHTTCCSSCEEEEETTTTEEEEECHHHHTTC-CHHHHHHHHHHHCC
T ss_pred --EEChHHHHHHcCCCCCeEEEEEcCCCCceeecCcccCCC-CHHHHHHHHHHhcC
Confidence 999999999999999999999999988889996 78 99999999998763
No 11
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.72 E-value=2.8e-16 Score=149.61 Aligned_cols=187 Identities=14% Similarity=0.230 Sum_probs=157.2
Q ss_pred CCCcccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhC---CCeEEEEEecCCC---hhHHHHHHHHHhhC-CCc
Q psy7942 3 SCLPGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIAD---SKVVVAGLFKDAS---SELAKTFNEIASKV-DDL 75 (216)
Q Consensus 3 ~g~~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~---~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~ 75 (216)
+|....|.|.+++++|.+|+.+...|+|..|+ .+++++++.. +.+++|.||.+|| ....+.|.++|+.+ +.+
T Consensus 518 ~g~~~~~~g~~~~~~l~~fi~~~~~~~v~~l~-~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v 596 (780)
T 3apo_A 518 QSSIHEYEGHHSAEQILEFIEDLRNPSVVSLT-PSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLI 596 (780)
T ss_dssp TTEEEEECSCSCHHHHHHHHHHHHSCSEEECC-HHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCceeeecCcccHHHHHHHHHhhcccceeecC-cccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCe
Confidence 45567899999999999999999999999886 5799998875 5678999999997 45678999999988 678
Q ss_pred eEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCC---CcccccC-CCCCHHHHHHHHhhcCC
Q psy7942 76 VFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDE---GRVNYEG-PASDEAALRKFLSTQSL 150 (216)
Q Consensus 76 ~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de---~~~~y~G-~~~~~~~l~~fi~~~~~ 150 (216)
.|+ .+| ++.++.+++++++++ |+|++|++.+. .+..|+| .+ +.++|.+||.....
T Consensus 597 ~~~--------------~vd-----~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~-~~~~l~~fi~~~~~ 656 (780)
T 3apo_A 597 NVG--------------SVD-----CGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNR-DAYSLRSWGLGFLP 656 (780)
T ss_dssp EEE--------------EEE-----TTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCC-SHHHHHHHHHTTSC
T ss_pred EEE--------------EEE-----CcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCC-CHHHHHHHHhhhcc
Confidence 898 566 777888999999986 99999997543 3567999 77 99999999999999
Q ss_pred CceeeeCcchHHH-hhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQK-IFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~~-~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
|.+.+++.+++.. +...+ ++.++.|..++++.+......+.++|+++++++.|+++|...
T Consensus 657 ~~v~~l~~~~~~~~~~~~~-~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~vd~~~ 717 (780)
T 3apo_A 657 QASIDLTPQTFNEKVLQGK-THWVVDFYAPWSGPSQNFAPEFELLARMIKGKVRAGKVDCQA 717 (780)
T ss_dssp CCSEEECHHHHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred cccccCCHHHHHHHHhcCC-CeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCceEEEEECCC
Confidence 9999999999865 44444 445666888888888889999999999999999999888653
No 12
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.70 E-value=5.2e-16 Score=147.77 Aligned_cols=205 Identities=11% Similarity=0.103 Sum_probs=159.0
Q ss_pred CCC-cccCCCCCChHHHHHHHHhhhCCCceeecCH---HHHHHhHhCCCeEEEEEecCCC-hhHHHHHHHHHhhC-CCce
Q psy7942 3 SCL-PGERRGGRTAEDIVNWLLKKTGPPAKEFTSV---DEIKAFIADSKVVVAGLFKDAS-SELAKTFNEIASKV-DDLV 76 (216)
Q Consensus 3 ~g~-~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~---~~~~~~~~~~~v~~V~f~~~~~-~~~~~~f~~~A~~~-~~~~ 76 (216)
+|. ...|.|.|++++|++|+.+++++++..+++. +++++++..+.+++|+|+...+ ......+.++|..+ +.+.
T Consensus 196 ~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~ 275 (780)
T 3apo_A 196 SGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVN 275 (780)
T ss_dssp TTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEE
T ss_pred CCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHHhhccce
Confidence 555 5789999999999999999999999999887 7888988888889999887643 23445666666665 4444
Q ss_pred EEec--c-------------------------------------------------------------------------
Q psy7942 77 FDAS--S------------------------------------------------------------------------- 81 (216)
Q Consensus 77 F~~~--~------------------------------------------------------------------------- 81 (216)
|++- .
T Consensus 276 f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~~~~~~l 355 (780)
T 3apo_A 276 VGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRLAHHRWL 355 (780)
T ss_dssp EEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHHTTSEEE
T ss_pred EEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHhccCCeE
Confidence 4431 0
Q ss_pred ----------hhhHHHHhhhhccc-c-ceee---ecccHHHHHhcCCCCCeEEEEecCC-CCcccccCCCCCHHHHHHHH
Q psy7942 82 ----------ELAKTFNEIASKVD-D-LVFV---TSTNADILAEYSVDDDTVAIFKKFD-EGRVNYEGPASDEAALRKFL 145 (216)
Q Consensus 82 ----------~~~~~~~~~~~~~~-~-~~~~---~t~~~~v~~~~~v~~p~i~~~~~~d-e~~~~y~G~~~~~~~l~~fi 145 (216)
...+.+.++|..++ + ..++ ++.++.++++++++.|++++|++++ +....|+|++ +.++|.+|+
T Consensus 356 v~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~p~i~l~~~~~~e~~~~~~g~~-~~~~i~~f~ 434 (780)
T 3apo_A 356 VFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQPSLAVFKGQGTKEYEIHHGKK-ILYDILAFA 434 (780)
T ss_dssp EEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCSCEEEEEESSTTSSEEECCSCC-CHHHHHHHH
T ss_pred EEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccCChhhhccCCCcceeeecccHh-hHHHHHHHh
Confidence 00134455555553 2 2222 2346779999999889999999987 5678899998 999999999
Q ss_pred hhcCCCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 146 STQSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 146 ~~~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
..+..|++.+++.+++..+ . + .+.++.|+.+.++++......|.++|++|++++.|+.+|...
T Consensus 435 ~~~~~~~v~~l~~~~~~~~-~-~-~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~ 497 (780)
T 3apo_A 435 KESVNSHVTTLGPQNFPAS-D-K-EPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTI 497 (780)
T ss_dssp HHHHTSCEEECCTTTSCTT-C-C-SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred hhccCCCCEecCHHHHHHc-C-C-CeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCC
Confidence 9999999999999998877 3 3 345667888888788899999999999999999999998653
No 13
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.59 E-value=4.9e-15 Score=126.73 Aligned_cols=130 Identities=21% Similarity=0.327 Sum_probs=107.8
Q ss_pred cccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCC-CeEEEEEecCCChhHHHHHHHHHhhC-CCceEEecchh
Q psy7942 6 PGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADS-KVVVAGLFKDASSELAKTFNEIASKV-DDLVFDASSEL 83 (216)
Q Consensus 6 ~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~-~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~~~~ 83 (216)
+..|.|+|++++|++|+.+++++++..|.+.+++++|++.+ .+.+++ |.. .+.....|..+|..+ +.+.|+
T Consensus 121 ~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~~~~~~vi~-fs~-~~~~~~~f~~~A~~~~~~~~F~----- 193 (298)
T 3ed3_A 121 NEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRKSPKLSVVL-FSK-QDKISPVYKSIALDWLGKFDFY----- 193 (298)
T ss_dssp EEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTSCSSEEEEE-EES-SSSCCHHHHHHHHHTBTTEEEE-----
T ss_pred ceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhcCCceEEEE-EcC-CCcchHHHHHHHHHhhcCcEEE-----
Confidence 67999999999999999999999999999999999999875 555555 533 445678999999998 899999
Q ss_pred hHHHHhhhhccccceeeecccHHHHHhc-----C-------------------CCCCeEEEEecCCCCcccccC-CCCCH
Q psy7942 84 AKTFNEIASKVDDLVFVTSTNADILAEY-----S-------------------VDDDTVAIFKKFDEGRVNYEG-PASDE 138 (216)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~t~~~~v~~~~-----~-------------------v~~p~i~~~~~~de~~~~y~G-~~~~~ 138 (216)
.+.++++++.+ + .+.|+|++|++.++.+..|+| .+ +.
T Consensus 194 -----------------~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~-~~ 255 (298)
T 3ed3_A 194 -----------------SISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSI-NK 255 (298)
T ss_dssp -----------------EEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSC-CH
T ss_pred -----------------EEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccC-CH
Confidence 56555555322 2 246999999988888999996 56 99
Q ss_pred HHHHHHHh--hcCCCceeeeCcch
Q psy7942 139 AALRKFLS--TQSLPLVVEFNHET 160 (216)
Q Consensus 139 ~~l~~fi~--~~~~P~v~~~~~~~ 160 (216)
+.|.+||. .+..|++++++..+
T Consensus 256 ~~i~~fi~~~~~~~p~~~~ls~~~ 279 (298)
T 3ed3_A 256 NDISKFLRDTFSITPNEGPFSRRS 279 (298)
T ss_dssp HHHHHHHHHHHTCCCSSSTTSHHH
T ss_pred HHHHHHHHhhcCCCCCcCCCchHH
Confidence 99999999 78999999999754
No 14
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.57 E-value=3.6e-13 Score=116.94 Aligned_cols=187 Identities=14% Similarity=0.186 Sum_probs=144.9
Q ss_pred CCcccCCCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhC-CCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEE
Q psy7942 4 CLPGERRGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIAD-SKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFD 78 (216)
Q Consensus 4 g~~~~Y~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~-~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~ 78 (216)
+.+..|+|+.++++|++|+.....|.+..++. +++..+..+ .+.++|.|+.+|+ ....+.|.++|+.+ +.+.|+
T Consensus 93 ~~~~~~~g~~~~~~i~~fi~~~~~p~v~~~~~-~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~ 171 (361)
T 3uem_A 93 EGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFI 171 (361)
T ss_dssp TSEEECCSCCCHHHHHHHHHHHSSCSEEECST-TTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEE
T ss_pred CCccccCCcCCHHHHHHHHHHcCCCcceecCc-ccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEE
Confidence 45678999999999999999999999999875 566676654 4567788888776 45677999999998 678888
Q ss_pred ecchhhHHHHhhhhccccceeeec--ccHHHHHhcCCC---CCeEEEEecCCCCccccc---CCCCCHHHHHHHHhhcC-
Q psy7942 79 ASSELAKTFNEIASKVDDLVFVTS--TNADILAEYSVD---DDTVAIFKKFDEGRVNYE---GPASDEAALRKFLSTQS- 149 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~~~v~---~p~i~~~~~~de~~~~y~---G~~~~~~~l~~fi~~~~- 149 (216)
.+| +. .++.+++.|+++ .|++++++..+ ....|. |.+ +.+.|.+|+....
T Consensus 172 --------------~vd-----~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~-~~~~l~~fi~~~l~ 230 (361)
T 3uem_A 172 --------------FID-----SDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEEL-TAERITEFCHRFLE 230 (361)
T ss_dssp --------------EEC-----TTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCC-CHHHHHHHHHHHHT
T ss_pred --------------Eec-----CChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCcccc-CHHHHHHHHHHHhc
Confidence 344 43 467899999996 49999999633 234554 778 9999999998731
Q ss_pred -----------C------CceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCc--eEEEEcCCC
Q psy7942 150 -----------L------PLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREK--EEQDEDDDQ 210 (216)
Q Consensus 150 -----------~------P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~--~~f~~~d~~ 210 (216)
. ..+..++.+++..+....-+..++.|+.++++++......+.++|++|+++ +.++.+|..
T Consensus 231 g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~ 310 (361)
T 3uem_A 231 GKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDST 310 (361)
T ss_dssp TCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETT
T ss_pred CCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECC
Confidence 1 237788888888766333245566788899988999999999999999875 899998876
Q ss_pred CC
Q psy7942 211 PK 212 (216)
Q Consensus 211 ~~ 212 (216)
..
T Consensus 311 ~~ 312 (361)
T 3uem_A 311 AN 312 (361)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 15
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.44 E-value=1.3e-12 Score=114.52 Aligned_cols=154 Identities=16% Similarity=0.231 Sum_probs=122.7
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCChhH--H-------HHHHHHHhhC-C-CceEEecchhhHHHHhhhhccccc
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASSEL--A-------KTFNEIASKV-D-DLVFDASSELAKTFNEIASKVDDL 97 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~--~-------~~f~~~A~~~-~-~~~F~~~~~~~~~~~~~~~~~~~~ 97 (216)
.|..|+ .++++++++++++++|.||++||+.. . ..|..+|..+ . .+.|+ +||
T Consensus 14 ~v~~lt-~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~--------------~Vd-- 76 (367)
T 3us3_A 14 RVINVN-AKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFG--------------LVD-- 76 (367)
T ss_dssp CCEECC-TTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEE--------------EEE--
T ss_pred ccEECC-HHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEE--------------EEe--
Confidence 356665 57899999999999999999999552 2 2678888877 3 58888 677
Q ss_pred eeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeCc-chHHHhhc-cCCcceEE
Q psy7942 98 VFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFNH-ETAQKIFG-GEIKSHLL 174 (216)
Q Consensus 98 ~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~~-~~~~~~~~-~~~~~~ll 174 (216)
++.+++++++|+|.+ ||+++|++ +....|.|.+ +.+.|.+||..+..|.+.+++. +++..+.. .. ...++
T Consensus 77 ---~~~~~~l~~~~~V~~~PTl~~f~~--G~~~~y~G~~-~~~~i~~~i~~~~~~~v~~i~~~~~~~~~~~~~~-~~~vv 149 (367)
T 3us3_A 77 ---SEKDAAVAKKLGLTEEDSIYVFKE--DEVIEYDGEF-SADTLVEFLLDVLEDPVELIEGERELQAFENIED-EIKLI 149 (367)
T ss_dssp ---TTTTHHHHHHHTCCSTTEEEEEET--TEEEECCSCC-SHHHHHHHHHHHHSCSEEECCSHHHHHHHHHCCS-SCEEE
T ss_pred ---CcccHHHHHHcCCCcCceEEEEEC--CcEEEeCCCC-CHHHHHHHHHHhcCCCcEEcCCHHHHHHHhccCC-CcEEE
Confidence 888999999999997 99999995 3457899999 9999999999999999999964 67777776 33 34555
Q ss_pred EEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 175 VFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 175 lf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
.|+... .......+.++|+.+++++.|..+..
T Consensus 150 ~ff~~~---~~~~~~~f~~~A~~~~~~~~F~~~~~ 181 (367)
T 3us3_A 150 GYFKNK---DSEHYKAFKEAAEEFHPYIPFFATFD 181 (367)
T ss_dssp EECSCT---TCHHHHHHHHHHHHHTTTSCEEEECC
T ss_pred EEECCC---CchHHHHHHHHHHhhcCCcEEEEECC
Confidence 666542 24556889999999999998887654
No 16
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.42 E-value=5e-12 Score=109.75 Aligned_cols=153 Identities=18% Similarity=0.211 Sum_probs=121.9
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh--hHHHH-------HHHHHhhC-C-CceEEecchhhHHHHhhhhccccce
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS--ELAKT-------FNEIASKV-D-DLVFDASSELAKTFNEIASKVDDLV 98 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~--~~~~~-------f~~~A~~~-~-~~~F~~~~~~~~~~~~~~~~~~~~~ 98 (216)
|..|+ .++++++++++++++|.||++||+ .+.+. |.++|..+ + .+.|+ .||
T Consensus 13 v~~l~-~~~f~~~i~~~~~~lV~F~a~wC~c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~--------------~Vd--- 74 (350)
T 1sji_A 13 VVSLT-EKNFKQVLKKYDVLCLYYHESVSSDKVAQKQFQLKEIVLELVAQVLEHKDIGFV--------------MVD--- 74 (350)
T ss_dssp CEEEC-HHHHHHHHTTCSEEEEEEECCSCSSSTTSHHHHHHHHHHHHHHHHGGGSSEEEE--------------EEE---
T ss_pred cEECC-HHHHHHHHhhCCeEEEEEECCCCcchhhCchhhhhhHHHHHHHHHHhhcCcEEE--------------EEe---
Confidence 55664 688999999999999999999994 33444 88889887 3 58888 566
Q ss_pred eeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeC-cchHHHhhc-cCCcceEEE
Q psy7942 99 FVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFN-HETAQKIFG-GEIKSHLLV 175 (216)
Q Consensus 99 ~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~-~~~~~~~~~-~~~~~~lll 175 (216)
++.+++++++|++.+ |++++|+++ ....|.|.+ +.+.|.+||.....|.+.+++ .+++..+.+ .. ...++.
T Consensus 75 --~~~~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~G~~-~~~~l~~~i~~~~~~~~~~l~~~~~~~~~~~~~~-~~~vv~ 148 (350)
T 1sji_A 75 --AKKEAKLAKKLGFDEEGSLYVLKGD--RTIEFDGEF-AADVLVEFLLDLIEDPVEIINSKLEVQAFERIED-QIKLIG 148 (350)
T ss_dssp --TTTTHHHHHHHTCCSTTEEEEEETT--EEEEECSCC-CHHHHHHHHHTTSSCSEEECCSHHHHHHHHHCCS-SCEEEE
T ss_pred --CCCCHHHHHhcCCCccceEEEEECC--cEEEecCCC-CHHHHHHHHHHhcCCcceeccchHHHHHHhccCC-CcEEEE
Confidence 788899999999987 999999863 367899999 999999999999999999996 567777766 44 344556
Q ss_pred EEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 176 FFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 176 f~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
|+... .......+.++|+.+++++.|..+..
T Consensus 149 ff~~~---~~~~~~~~~~~A~~~~~~~~f~~~~~ 179 (350)
T 1sji_A 149 FFKSE---ESEYYKAFEEAAEHFQPYIKFFATFD 179 (350)
T ss_dssp ECSCT---TSHHHHHHHHHHHHTTTTSEEEEECC
T ss_pred EECCC---CcHHHHHHHHHHHhhccCcEEEEECC
Confidence 66542 23446889999999999999988753
No 17
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.40 E-value=8e-12 Score=101.85 Aligned_cols=159 Identities=18% Similarity=0.332 Sum_probs=127.0
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-C---CceEEecchhhHHHHhhhhccccceeee
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-D---DLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~---~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.+..++ .++++.++.++++++|.|+++||. ...+.|.+++..+ + ++.|+ .+| +
T Consensus 16 ~v~~l~-~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~--------------~vd-----~ 75 (241)
T 3idv_A 16 GVLVLN-DANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVA--------------KID-----A 75 (241)
T ss_dssp TEEEEC-TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEE--------------EEE-----T
T ss_pred CcEEec-ccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEE--------------EEe-----c
Confidence 456665 478999999999999999999984 5567888888876 2 27777 455 6
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCC-------ceeeeCcchHHHhhccCCcceE
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLP-------LVVEFNHETAQKIFGGEIKSHL 173 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P-------~v~~~~~~~~~~~~~~~~~~~l 173 (216)
..+++++++|++.. |++++|++ +..+.|.|.. +.+.|.+||.....| .+..++.+++..+...+ +..+
T Consensus 76 ~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~g~~-~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 151 (241)
T 3idv_A 76 TSASVLASRFDVSGYPTIKILKK--GQAVDYEGSR-TQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDA-DIIL 151 (241)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCS-CHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHC-SEEE
T ss_pred cCCHHHHHhcCCCcCCEEEEEcC--CCcccccCcc-cHHHHHHHHhhccCcccccccccceeccHHHHHHhhccC-CeEE
Confidence 77889999999987 99999985 4456799999 999999999886443 46678888888887765 3456
Q ss_pred EEEEeCCccchhhhhHHHHHHHHhccCc---eEEEEcCCCC
Q psy7942 174 LVFFSKAAGHYESHFEPVQTVAKDFREK---EEQDEDDDQP 211 (216)
Q Consensus 174 llf~~~~~~~~~~~~~~l~~vA~~~r~~---~~f~~~d~~~ 211 (216)
+.|...+..........+.++|++++++ +.|+.+|...
T Consensus 152 v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~ 192 (241)
T 3idv_A 152 VEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA 192 (241)
T ss_dssp EEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT
T ss_pred EEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC
Confidence 6688888888888899999999999875 8888887543
No 18
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.39 E-value=2.7e-11 Score=103.45 Aligned_cols=155 Identities=17% Similarity=0.249 Sum_probs=118.4
Q ss_pred CceeecCHHHHHHhHh-CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec-
Q psy7942 29 PAKEFTSVDEIKAFIA-DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS- 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t- 102 (216)
.+..| +.+++++++. .+++++|.|+++||. .+.+.|.++|..+ +.+.|+ .++ +.
T Consensus 18 ~vv~l-t~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~--------------~v~-----~d~ 77 (298)
T 3ed3_A 18 HISEL-TPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVA--------------AVN-----CDL 77 (298)
T ss_dssp TCEEC-CHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEE--------------EEE-----TTS
T ss_pred CeEEe-CHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEE--------------EEE-----ccC
Confidence 45566 4689999884 578899999999984 5577899999988 456666 232 22
Q ss_pred -ccHHHHHhcCCCC-CeEEEEecCC----------------CCcccccCCCCCHHHHHHHHhhcCCCceeeeCc-chHHH
Q psy7942 103 -TNADILAEYSVDD-DTVAIFKKFD----------------EGRVNYEGPASDEAALRKFLSTQSLPLVVEFNH-ETAQK 163 (216)
Q Consensus 103 -~~~~v~~~~~v~~-p~i~~~~~~d----------------e~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~~-~~~~~ 163 (216)
.+++++++|++.+ |++++|++.. .....|.|.+ +.+.|.+|+.....|.+..++. +++..
T Consensus 78 ~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r-~~~~i~~fl~~~~~~~v~~i~~~~~l~~ 156 (298)
T 3ed3_A 78 NKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGAR-TLAPIVDFSLSRIRSYVKKFVRIDTLGS 156 (298)
T ss_dssp TTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCC-SHHHHHHHHHTTCCCCEEECSCGGGHHH
T ss_pred ccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCc-CHHHHHHHHHHhcccccEEcCCHHHHHH
Confidence 5688999999986 9999999743 1256899999 9999999999999999999964 57777
Q ss_pred hhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 164 IFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 164 ~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+....-.+.+++| ..+ ......++.+|.+|++++.|..++.
T Consensus 157 ~l~~~~~~~vi~f-s~~----~~~~~~f~~~A~~~~~~~~F~~v~~ 197 (298)
T 3ed3_A 157 LLRKSPKLSVVLF-SKQ----DKISPVYKSIALDWLGKFDFYSISN 197 (298)
T ss_dssp HHTSCSSEEEEEE-ESS----SSCCHHHHHHHHHTBTTEEEEEEEG
T ss_pred HHhcCCceEEEEE-cCC----CcchHHHHHHHHHhhcCcEEEEEcc
Confidence 7765423334444 433 2345789999999999999987754
No 19
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.36 E-value=1.6e-11 Score=110.52 Aligned_cols=154 Identities=21% Similarity=0.365 Sum_probs=123.3
Q ss_pred ceeecCHHHHHHhHhCC---CeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 30 AKEFTSVDEIKAFIADS---KVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~---~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
|..|+ .+++++.+.++ ++++|.||++||. .+.+.|.++|..+ +.+.|+ .|| ++
T Consensus 3 v~~l~-~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~--------------~vd-----~~ 62 (481)
T 3f8u_A 3 VLELT-DDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLA--------------KVD-----CT 62 (481)
T ss_dssp CEEEC-TTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEE--------------EEE-----TT
T ss_pred eEEec-HHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEE--------------EEE-----CC
Confidence 45664 47889999877 9999999999984 5677999999998 458888 566 77
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeC-cchHHHhhccCCcceEEEEEeCC
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFN-HETAQKIFGGEIKSHLLVFFSKA 180 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~-~~~~~~~~~~~~~~~lllf~~~~ 180 (216)
.+++++++|++.+ |++++|+++ +....|.|.. +.+.|.+|+.....|.+.+++ .+.+..+.+.. ...++.|+...
T Consensus 63 ~~~~l~~~~~v~~~Ptl~~~~~g-~~~~~~~G~~-~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~vv~~~~~~ 139 (481)
T 3f8u_A 63 ANTNTCNKYGVSGYPTLKIFRDG-EEAGAYDGPR-TADGIVSHLKKQAGPASVPLRTEEEFKKFISDK-DASIVGFFDDS 139 (481)
T ss_dssp TCHHHHHHTTCCEESEEEEEETT-EEEEECCSCS-SHHHHHHHHHHHTSCSEEEECSHHHHHHHTTSS-SCEEEEEESCT
T ss_pred CCHHHHHhcCCCCCCEEEEEeCC-ceeeeecCcc-CHHHHHHHHHhhcccCceecCCHHHHHHHHhcC-CcEEEEEECCC
Confidence 8899999999987 999999963 2357799998 999999999999999999995 45677766654 34455566433
Q ss_pred ccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 181 AGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 181 ~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
.......+.++|..+++++.|..+..
T Consensus 140 ---~~~~~~~f~~~a~~~~~~~~F~~~~~ 165 (481)
T 3f8u_A 140 ---FSEAHSEFLKAASNLRDNYRFAHTNV 165 (481)
T ss_dssp ---TCHHHHHHHHHHHHHTTTSCEEEECC
T ss_pred ---ccchHHHHHHHHHHhccCceEEEECC
Confidence 24567899999999999999977654
No 20
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.35 E-value=4e-11 Score=108.68 Aligned_cols=154 Identities=19% Similarity=0.339 Sum_probs=123.7
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-C-CceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-D-DLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~-~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.|..|+ .++++++++++++++|.||.+||. .+.+.|.++|..+ + ++.|+ .|| ++.
T Consensus 15 ~v~~l~-~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~--------------~vd-----~~~ 74 (504)
T 2b5e_A 15 AVVKLA-TDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLA--------------QID-----CTE 74 (504)
T ss_dssp SCEECC-TTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEE--------------EEE-----TTT
T ss_pred CcEECC-HHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEE--------------EEE-----CCC
Confidence 456664 578999999999999999999984 5677999999998 4 48888 676 788
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCC-cccccCCCCCHHHHHHHHhhcCCCceeeeCcchHHHhhccCC-cceEEEEEeCC
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEG-RVNYEGPASDEAALRKFLSTQSLPLVVEFNHETAQKIFGGEI-KSHLLVFFSKA 180 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~-~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~~~~~~~~~~~~~-~~~lllf~~~~ 180 (216)
+++++++|++.+ |++++|+++... ...|.|.+ +.+.|.+||.....|.+.+++. +..+.+..- ...+++|+...
T Consensus 75 ~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~-~~~~l~~~l~~~~~~~v~~i~~--~~~~~~~~~~~~~~v~~f~~~ 151 (504)
T 2b5e_A 75 NQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPR-TAEAIVQFMIKQSQPAVAVVAD--LPAYLANETFVTPVIVQSGKI 151 (504)
T ss_dssp CHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCC-SHHHHHHHHHHHTSCSEEECSC--HHHHHHHSCCSSCEEEEEESC
T ss_pred CHHHHHhcCCCcCCEEEEEeCCccccceeecCCC-CHHHHHHHHHHhcCCcceeHHH--HHHHHhcCCCceEEEEEeCCC
Confidence 899999999997 999999974321 67899998 9999999999999999999988 666666542 13455666543
Q ss_pred ccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 181 AGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 181 ~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
. ......++++|..+++++.|..++
T Consensus 152 ~---~~~~~~f~~~A~~~~~~~~F~~~~ 176 (504)
T 2b5e_A 152 D---ADFNATFYSMANKHFNDYDFVSAE 176 (504)
T ss_dssp C---HHHHHHHHHHHHHTTTTCEEEEEE
T ss_pred C---chHHHHHHHHHHHhhcCcEEEEEH
Confidence 2 445679999999999999997764
No 21
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.32 E-value=1.3e-11 Score=100.58 Aligned_cols=128 Identities=20% Similarity=0.387 Sum_probs=104.9
Q ss_pred CCCcccCCCCCChHHHHHHHHhhhCCC------ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-
Q psy7942 3 SCLPGERRGGRTAEDIVNWLLKKTGPP------AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKV- 72 (216)
Q Consensus 3 ~g~~~~Y~G~Rta~~iv~~l~~~~~~~------v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~- 72 (216)
+|..+.|.|.++++.|.+|+.+...+. .....+.++++.++..+++++|.|+.+|| ....+.|.++|..+
T Consensus 98 ~g~~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~ 177 (241)
T 3idv_A 98 KGQAVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELS 177 (241)
T ss_dssp TTEEEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHH
T ss_pred CCCcccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHh
Confidence 577788999999999999999998763 22334568899999989999999999997 45567888888876
Q ss_pred C---CceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 73 D---DLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 73 ~---~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
. .+.|+ .+| .+.+++++++|++.. |++++|++ +....|.|.+ +.+.|.+||..+
T Consensus 178 ~~~~~v~~~--------------~vd-----~~~~~~l~~~~~v~~~Pt~~~~~~--g~~~~~~g~~-~~~~l~~~l~~~ 235 (241)
T 3idv_A 178 KRSPPIPLA--------------KVD-----ATAETDLAKRFDVSGYPTLKIFRK--GRPYDYNGPR-EKYGIVDYMIEQ 235 (241)
T ss_dssp TSSSCCCEE--------------EEE-----TTTCHHHHHHTTCCSSSEEEEEET--TEEEECCSCC-SHHHHHHHHHHH
T ss_pred ccCCcEEEE--------------EEE-----CCCCHHHHHHcCCcccCEEEEEEC--CeEEEecCCC-CHHHHHHHHHhh
Confidence 2 37787 455 667889999999986 99999995 4456699999 999999999988
Q ss_pred CCCc
Q psy7942 149 SLPL 152 (216)
Q Consensus 149 ~~P~ 152 (216)
..|.
T Consensus 236 ~~~~ 239 (241)
T 3idv_A 236 SGAA 239 (241)
T ss_dssp TTCT
T ss_pred hCCC
Confidence 7664
No 22
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.25 E-value=4.9e-11 Score=104.75 Aligned_cols=153 Identities=16% Similarity=0.321 Sum_probs=109.7
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCC-------CceEEecchhhHHHHhhhhcccccee
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVD-------DLVFDASSELAKTFNEIASKVDDLVF 99 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~-------~~~F~~~~~~~~~~~~~~~~~~~~~~ 99 (216)
|..|+ .++++.++.++++++|.||++||. .+.+.|.++|..+. .+.|+ .||
T Consensus 7 v~~l~-~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~--------------~Vd---- 67 (382)
T 2r2j_A 7 ITSLD-TENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFA--------------RVD---- 67 (382)
T ss_dssp -CBCC-TTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEE--------------EEE----
T ss_pred eEECC-HHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEE--------------EEE----
Confidence 55565 478888888899999999999984 45778999988761 37787 566
Q ss_pred eecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeCc-chHHHhhccCCcceEEEEE
Q psy7942 100 VTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFNH-ETAQKIFGGEIKSHLLVFF 177 (216)
Q Consensus 100 ~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~~-~~~~~~~~~~~~~~lllf~ 177 (216)
++.+++++++|++.+ |++++|+++......|.|.. +.+.|.+||....-|.+.+++. +.+.. +... ...+++|+
T Consensus 68 -~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~-~~~~l~~~i~~~~~~~v~~l~~~~~l~~-l~~~-~~~~v~ff 143 (382)
T 2r2j_A 68 -CDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQR-SVKALADYIRQQKSDPIQEIRDLAEITT-LDRS-KRNIIGYF 143 (382)
T ss_dssp -TTTCHHHHHHTTCCEESEEEEEETTEEEEEECCSCC-SHHHHHHHHHHHHSCCCEEC--------------CCEEEEEE
T ss_pred -CCccHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcc-hHHHHHHHHHHhccCCceecCCHHHHHH-hcCC-CCEEEEEE
Confidence 778899999999987 99999995322122599999 9999999999998898998864 45655 4443 34456666
Q ss_pred eCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 178 SKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 178 ~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
.... ....+.+.++|+.+++++.|....
T Consensus 144 ~~~~---~~~~~~f~~~A~~~~~~~~F~~~~ 171 (382)
T 2r2j_A 144 EQKD---SDNYRVFERVANILHDDCAFLSAF 171 (382)
T ss_dssp SCSS---SHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCC---ChhHHHHHHHHHHhhccceEEEEe
Confidence 5332 334678999999999998875543
No 23
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.15 E-value=4.2e-10 Score=90.97 Aligned_cols=157 Identities=18% Similarity=0.174 Sum_probs=116.8
Q ss_pred cCHHHHHHhH-h--CCCeEEEEEecC-CCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc--c
Q psy7942 34 TSVDEIKAFI-A--DSKVVVAGLFKD-ASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST--N 104 (216)
Q Consensus 34 ~s~~~~~~~~-~--~~~v~~V~f~~~-~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~--~ 104 (216)
.+.+++++++ + .++++++.|+.+ ||. ...+.+.++|...+.+.|+ .+| +.. +
T Consensus 7 ~~~~~~~~~~~~~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~~~~v~~~--------------~vd-----~~~~~~ 67 (226)
T 1a8l_A 7 ADKKVIKEEFFSKMVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYE--------------IVD-----FDTPEG 67 (226)
T ss_dssp HHHHHHHHHTGGGCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTTCTTEEEE--------------EEE-----TTSHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCCCCchhHHHHHHHHHHHhhCCceEEE--------------EEe-----CCCccc
Confidence 3557777777 3 468888999998 874 5677888888766778888 455 556 7
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC--CCceeeeCcchHHHhhccCCcceEEEEEeCCc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS--LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAA 181 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~--~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~ 181 (216)
++++++|++.. |++++|+...+....|.|.. ....+.+|+.... -.....++.+++..+...+.+..++.|..+++
T Consensus 68 ~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~-~~~~l~~~l~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC 146 (226)
T 1a8l_A 68 KELAKRYRIDRAPATTITQDGKDFGVRYFGLP-AGHEFAAFLEDIVDVSREETNLMDETKQAIRNIDQDVRILVFVTPTC 146 (226)
T ss_dssp HHHHHHTTCCSSSEEEEEETTBCCSEEEESCC-CTTHHHHHHHHHHHHHHTCCCCCHHHHHHHTTCCSCEEEEEEECSSC
T ss_pred HHHHHHcCCCcCceEEEEcCCceeeEEEeccC-cHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 88999999986 99999986443346788987 7788888887632 12245677777776655442333667988888
Q ss_pred cchhhhhHHHHHHHHhcc----CceEEEEcCCC
Q psy7942 182 GHYESHFEPVQTVAKDFR----EKEEQDEDDDQ 210 (216)
Q Consensus 182 ~~~~~~~~~l~~vA~~~r----~~~~f~~~d~~ 210 (216)
+........+.++|+++. +++.++.+|..
T Consensus 147 ~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~ 179 (226)
T 1a8l_A 147 PYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 179 (226)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG
T ss_pred CccHHHHHHHHHHHHhcccccCCcEEEEEEEcc
Confidence 888999999999999998 67888877654
No 24
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.04 E-value=1.6e-09 Score=78.35 Aligned_cols=97 Identities=19% Similarity=0.288 Sum_probs=78.7
Q ss_pred ceeecCHHHHHHhHhC--CCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKAFIAD--SKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~--~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
|..|.|.+++++.+.+ +++++|.|+++||+ ...+.|.++|..+.++.|+ .|| ...+
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~--------------~vd-----~d~~ 62 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFL--------------KVD-----VDEC 62 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEE--------------EEE-----TTTC
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEE--------------EEe-----cccC
Confidence 4578899999998864 68999999999984 5567889999988888888 566 6678
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|+|.+ ||+++|+++. ....+.| . +.+.|.+||.+|
T Consensus 63 ~~l~~~~~V~~~PT~~~~~~G~-~v~~~~G-~-~~~~l~~~i~k~ 104 (105)
T 3zzx_A 63 EDIAQDNQIACMPTFLFMKNGQ-KLDSLSG-A-NYDKLLELVEKN 104 (105)
T ss_dssp HHHHHHTTCCBSSEEEEEETTE-EEEEEES-C-CHHHHHHHHHHH
T ss_pred HHHHHHcCCCeecEEEEEECCE-EEEEEeC-c-CHHHHHHHHHhc
Confidence 89999999986 9999998532 2345677 4 789999999876
No 25
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.02 E-value=5.2e-09 Score=84.87 Aligned_cols=154 Identities=16% Similarity=0.146 Sum_probs=110.3
Q ss_pred CHHHHHHhH--h-CCCeEEEEEec----CCCh---hHHHHHHHHHhhC---CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 35 SVDEIKAFI--A-DSKVVVAGLFK----DASS---ELAKTFNEIASKV---DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 35 s~~~~~~~~--~-~~~v~~V~f~~----~~~~---~~~~~f~~~A~~~---~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
..+++++++ + .++++++.|+. +||. ...++|.++|..+ +.+.|+ .+| +
T Consensus 7 ~~~~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~--------------~vd-----~ 67 (229)
T 2ywm_A 7 VRMQLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLD--------------IYS-----P 67 (229)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEE--------------EEC-----T
T ss_pred HHHHHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEE--------------Eec-----C
Confidence 346777777 3 34555555433 3443 4456777776554 467887 566 7
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC--CCceeeeCcchHHHhhccCCcceEEEEEe
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS--LPLVVEFNHETAQKIFGGEIKSHLLVFFS 178 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~--~P~v~~~~~~~~~~~~~~~~~~~lllf~~ 178 (216)
+.+++++++|+|.. |++++|+. ......|.|.. +...|.+|+.... -+.+..++.+++..+...+.+..++.|..
T Consensus 68 ~~~~~l~~~~~v~~~Ptl~~~~~-~~~~~~~~G~~-~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~F~a 145 (229)
T 2ywm_A 68 FTHKEETEKYGVDRVPTIVIEGD-KDYGIRYIGLP-AGLEFTTLINGIFHVSQRKPQLSEKTLELLQVVDIPIEIWVFVT 145 (229)
T ss_dssp TTCHHHHHHTTCCBSSEEEEESS-SCCCEEEESCC-CTTHHHHHHHHHHHHHTTCCSCCHHHHHHHTTCCSCEEEEEEEC
T ss_pred cccHHHHHHcCCCcCcEEEEECC-CcccceecCCc-cHHHHHHHHHHHHhccCCccCCCHHHHHHHHhcCCCeEEEEEEC
Confidence 78899999999997 99999984 34467799988 8888999987642 23467788888877765442232455888
Q ss_pred CCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 179 KAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 179 ~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+.+........+.++|+++ +++.++.+|..
T Consensus 146 ~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~ 176 (229)
T 2ywm_A 146 TSCGYCPSAAVMAWDFALAN-DYITSKVIDAS 176 (229)
T ss_dssp TTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGG
T ss_pred CCCcchHHHHHHHHHHHHHC-CCeEEEEEECC
Confidence 88888899999999999999 57888777643
No 26
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.92 E-value=1.3e-08 Score=75.05 Aligned_cols=101 Identities=14% Similarity=0.255 Sum_probs=79.9
Q ss_pred CCceeecCHHHHHHhHh-CCCeEEEEEecCCCh---hHHHHHHHHHhhC------CCceEEecchhhHHHHhhhhccccc
Q psy7942 28 PPAKEFTSVDEIKAFIA-DSKVVVAGLFKDASS---ELAKTFNEIASKV------DDLVFDASSELAKTFNEIASKVDDL 97 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~---~~~~~f~~~A~~~------~~~~F~~~~~~~~~~~~~~~~~~~~ 97 (216)
..+..|+ .++++..+. +++.++|.|+.+||. ...+.|.++|..+ +.+.|+ .||
T Consensus 15 ~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~--------------~vd-- 77 (127)
T 3h79_A 15 SRVVELT-DETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAA--------------RID-- 77 (127)
T ss_dssp CCCEECC-TTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEE--------------EEE--
T ss_pred CceEECC-hhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEE--------------EEE--
Confidence 3456665 578888875 589999999999984 5677899988653 457787 566
Q ss_pred eeeecccHHHHHhcCCCC-CeEEEEecCCCC-cccccCCCCCHHHHHHHHhhcC
Q psy7942 98 VFVTSTNADILAEYSVDD-DTVAIFKKFDEG-RVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 98 ~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~-~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
+..+++++++|++.. |++++|++.... ...|.|.. +.+.|.+||.+++
T Consensus 78 ---~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~-~~~~l~~~i~~~s 127 (127)
T 3h79_A 78 ---GEKYPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQR-YLSLVDSFVFQNT 127 (127)
T ss_dssp ---TTTCHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCC-CHHHHHHHHHHHC
T ss_pred ---ccccHhHHHhcCCccCCEEEEEeCCCCCCceEecCCc-cHHHHHHHHHhcC
Confidence 777889999999986 999999975442 36899999 9999999998753
No 27
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.84 E-value=2.1e-08 Score=83.46 Aligned_cols=98 Identities=15% Similarity=0.219 Sum_probs=82.8
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEe--cCCChhHHHHHHHHHhhC----CCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLF--KDASSELAKTFNEIASKV----DDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~--~~~~~~~~~~f~~~A~~~----~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
.+..|+ .+++++++.+++.++|-|| .+||+ +.+.|.++|..+ +++.|+ .|| ++
T Consensus 17 ~v~~Lt-~~nF~~vi~~~~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~a--------------kVD-----~d 75 (248)
T 2c0g_A 17 GCVDLD-ELSFEKTVERFPYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIA--------------TVG-----VK 75 (248)
T ss_dssp TCEECC-TTTHHHHHTTSSEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEE--------------EEE-----EC
T ss_pred CcEECC-HHHHHHHHhcCCCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEE--------------EEE-----CC
Confidence 456665 4788888888899999999 99998 999999999886 368888 677 77
Q ss_pred c-----cHHHHHhcCCC--C-CeEEEEecCC-CCcccc--cCCCCCHHHHHHHHhhcC
Q psy7942 103 T-----NADILAEYSVD--D-DTVAIFKKFD-EGRVNY--EGPASDEAALRKFLSTQS 149 (216)
Q Consensus 103 ~-----~~~v~~~~~v~--~-p~i~~~~~~d-e~~~~y--~G~~~~~~~l~~fi~~~~ 149 (216)
. +++++.+|+|. . ||+++|+ +. .....| .|.. +.+.|.+||..+.
T Consensus 76 ~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~-~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 76 DYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDV-TLDNLKAFVSANT 131 (248)
T ss_dssp SSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCC-CHHHHHHHHHHHS
T ss_pred cccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCC-CHHHHHHHHHHhh
Confidence 6 78999999999 5 9999999 55 346778 8998 9999999999874
No 28
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.83 E-value=3.1e-08 Score=82.12 Aligned_cols=99 Identities=24% Similarity=0.365 Sum_probs=82.3
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEec--CCChhHHHHHHHHHhhC---CCceEEecchhhHHHHhhhhccccceeeec-
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFK--DASSELAKTFNEIASKV---DDLVFDASSELAKTFNEIASKVDDLVFVTS- 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~--~~~~~~~~~f~~~A~~~---~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t- 102 (216)
.+..|+ .+++++++..++.++|.||. +||+ ..+.|.++|..+ +++.|+ .|| +.
T Consensus 6 ~v~~Lt-~~nF~~~i~~~~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~a--------------kVD-----vd~ 64 (240)
T 2qc7_A 6 GALPLD-TVTFYKVIPKSKFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVA--------------EVG-----ISD 64 (240)
T ss_dssp TCEECC-TTHHHHHGGGCSEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEE--------------EEC-----CCC
T ss_pred CceECC-HHHHHHHHcCCCCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEE--------------EEe-----CCc
Confidence 455665 47899999889999999999 9999 999999999887 468888 454 32
Q ss_pred ----ccHHHHHhcCCC--C-CeEEEEecCC-CCcccccCCCCCHHHHHHHHhhcC
Q psy7942 103 ----TNADILAEYSVD--D-DTVAIFKKFD-EGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 103 ----~~~~v~~~~~v~--~-p~i~~~~~~d-e~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
.+++++++|+|. . |++++|+++. .....|.|.. +.+.|.+||..+.
T Consensus 65 ~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~-~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 65 YGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAV-KVGAIQRWLKGQG 118 (240)
T ss_dssp SSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCS-CHHHHHHHHHHTT
T ss_pred ccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCC-CHHHHHHHHHHhc
Confidence 378999999999 5 9999999755 3467899998 9999999999884
No 29
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.82 E-value=5.6e-09 Score=80.20 Aligned_cols=66 Identities=39% Similarity=0.680 Sum_probs=50.6
Q ss_pred HHhhcCCCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 144 FLSTQSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 144 fi~~~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
-++.+++|+|+++|.+|+..+++++++.++++|.+.+.++.+.+++.++++|++||++++|+++|.
T Consensus 7 ~~~~~~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~ 72 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDS 72 (147)
T ss_dssp --------CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECT
T ss_pred chhhccCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEec
Confidence 367899999999999999999999876655557665555678899999999999999999999997
No 30
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.74 E-value=1.6e-08 Score=72.04 Aligned_cols=97 Identities=12% Similarity=0.166 Sum_probs=65.0
Q ss_pred eeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHH
Q psy7942 31 KEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADI 107 (216)
Q Consensus 31 ~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v 107 (216)
..+++.+++++.++++++++|.|+++||. ...+.+.+++..++++.|. .+| ...++++
T Consensus 3 ~~i~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~--------------~vd-----~~~~~~l 63 (105)
T 4euy_A 3 NTFKTIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYNYVEKI--------------EIL-----LQDMQEI 63 (105)
T ss_dssp -------CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEE--------------EEE-----ECCC---
T ss_pred cccCCHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcCCceEE--------------EEE-----CCCCHHH
Confidence 45677788888888899999999999984 5567888999888778887 455 6677889
Q ss_pred HHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 108 LAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 108 ~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 64 ~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~-~~~~l~~~l~~~ 103 (105)
T 4euy_A 64 AGRYAVFTGPTVLLFYNG-KEILRESRFI-SLENLERTIQLF 103 (105)
T ss_dssp ------CCCCEEEEEETT-EEEEEEESSC-CHHHHHHHHHTT
T ss_pred HHhcCCCCCCEEEEEeCC-eEEEEEeCCc-CHHHHHHHHHHh
Confidence 99999986 999999842 2234567888 999999999864
No 31
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.73 E-value=2.3e-07 Score=75.55 Aligned_cols=122 Identities=11% Similarity=0.193 Sum_probs=89.7
Q ss_pred CcccCCC----CCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCC-CeEEEEEecCCC---hhHHHHHHHHHhhC-CCc
Q psy7942 5 LPGERRG----GRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADS-KVVVAGLFKDAS---SELAKTFNEIASKV-DDL 75 (216)
Q Consensus 5 ~~~~Y~G----~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~-~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~ 75 (216)
.+.+|.| +|++++|++|++....|.+.+++ .+++..+.++. +..++.|...++ ....+.|.++|+.+ +.+
T Consensus 86 ~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t-~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~i 164 (227)
T 4f9z_D 86 EQLNLEDEDIESIDATKLSRFIEINSLHMVTEYN-PVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGKI 164 (227)
T ss_dssp EEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECC-HHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTTC
T ss_pred ccccccccccCCCCHHHHHHHHHHhCCCceeecC-cccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCCE
Confidence 3567884 89999999999999999999996 67788887765 445555555443 34568999999999 678
Q ss_pred eEEecchhhHHHHhhhhccccceeeec--ccHHHHHhcCCC---CCeEEEEecCCCCcccc-cCCCCCHHHHHHHHhh
Q psy7942 76 VFDASSELAKTFNEIASKVDDLVFVTS--TNADILAEYSVD---DDTVAIFKKFDEGRVNY-EGPASDEAALRKFLST 147 (216)
Q Consensus 76 ~F~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~~~v~---~p~i~~~~~~de~~~~y-~G~~~~~~~l~~fi~~ 147 (216)
.|++ +| .. ..+.+++.+|++ .|+|+++...+.....+ .|.+ +.+.|.+|+..
T Consensus 165 ~F~~--------------vd-----~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~-t~~~i~~Fv~~ 222 (227)
T 4f9z_D 165 LFIL--------------VD-----SGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEV-SVEHVQNFCDG 222 (227)
T ss_dssp EEEE--------------EE-----TTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCC-CHHHHHHHHHH
T ss_pred EEEE--------------eC-----CccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCC-CHHHHHHHHHH
Confidence 8883 22 21 234578889987 39999998643323334 3788 99999999975
No 32
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.72 E-value=1e-07 Score=77.14 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=91.8
Q ss_pred CcccCCCCCChHHHHHHHHhhhC--CCceeecCHHHHHHhHhCC-CeEEEEEecCCCh---hHHHHHHHHHhhCCCceEE
Q psy7942 5 LPGERRGGRTAEDIVNWLLKKTG--PPAKEFTSVDEIKAFIADS-KVVVAGLFKDASS---ELAKTFNEIASKVDDLVFD 78 (216)
Q Consensus 5 ~~~~Y~G~Rta~~iv~~l~~~~~--~~v~~l~s~~~~~~~~~~~-~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~ 78 (216)
.+..|.|.|+.++|.+|+.+... ..+..+ +.+.++.++..+ +++++.|+.+||. ...+.+.+++..++++.|+
T Consensus 93 ~~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~~v~~~ 171 (229)
T 2ywm_A 93 YGIRYIGLPAGLEFTTLINGIFHVSQRKPQL-SEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALANDYITSK 171 (229)
T ss_dssp CCEEEESCCCTTHHHHHHHHHHHHHTTCCSC-CHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccceecCCccHHHHHHHHHHHHhccCCccCC-CHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHCCCeEEE
Confidence 45789999999999999998753 334455 457788877654 4558889999984 5667888888888778887
Q ss_pred ecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 79 ASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+| ...+++++++|++.. |++++ + +....|.|.. +.+.|.+||...
T Consensus 172 --------------~vd-----~~~~~~l~~~~~v~~~Pt~~~--~--G~~~~~~G~~-~~~~l~~~l~~~ 218 (229)
T 2ywm_A 172 --------------VID-----ASENQDLAEQFQVVGVPKIVI--N--KGVAEFVGAQ-PENAFLGYIMAV 218 (229)
T ss_dssp --------------EEE-----GGGCHHHHHHTTCCSSSEEEE--G--GGTEEEESCC-CHHHHHHHHHHH
T ss_pred --------------EEE-----CCCCHHHHHHcCCcccCEEEE--C--CEEEEeeCCC-CHHHHHHHHHHH
Confidence 454 566789999999986 99998 3 2244589998 899999999764
No 33
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.70 E-value=2e-07 Score=66.29 Aligned_cols=98 Identities=11% Similarity=0.280 Sum_probs=77.8
Q ss_pred CceeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhCC-CceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKVD-DLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~-~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
++..+ +.+++++.+ ++++.++|.|+.+||. ...+.+.+++..++ .+.|+ .++ ...
T Consensus 5 ~v~~l-~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~--------------~vd-----~~~ 64 (111)
T 3gnj_A 5 SLEKL-DTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFY--------------YVD-----VEE 64 (111)
T ss_dssp CSEEC-CHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEE--------------EEE-----TTT
T ss_pred cceec-CHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEE--------------EEE-----CCc
Confidence 45566 678999888 7889999999999984 55668888898884 68887 455 667
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....|.|.. +.+.|.+||...
T Consensus 65 ~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~~ 108 (111)
T 3gnj_A 65 EKTLFQRFSLKGVPQILYFKDG-EYKGKMAGDV-EDDEVEQMIADV 108 (111)
T ss_dssp CHHHHHHTTCCSSCEEEEEETT-EEEEEEESSC-CHHHHHHHHHHH
T ss_pred ChhHHHhcCCCcCCEEEEEECC-EEEEEEeccC-CHHHHHHHHHHH
Confidence 888999999986 999999742 2234678988 999999999764
No 34
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.70 E-value=1.6e-07 Score=69.45 Aligned_cols=97 Identities=21% Similarity=0.256 Sum_probs=78.0
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNAD 106 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 106 (216)
+..|++.+++++.++.+++++|.|+.+||. ...+.|.+++..++++.|. .+| ...+++
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~--------------~vd-----~d~~~~ 81 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFA--------------KVD-----ADNNSE 81 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEE--------------EEE-----TTTCHH
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEE--------------EEE-----CCCCHH
Confidence 678888899999998899999999999984 4567888899888778887 455 566788
Q ss_pred HHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 107 ILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 107 v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++|++.. |++++|+++ .....+.| . +.+.|.+||...
T Consensus 82 l~~~~~v~~~Pt~~i~~~G-~~~~~~~G-~-~~~~l~~~l~~~ 121 (125)
T 1r26_A 82 IVSKCRVLQLPTFIIARSG-KMLGHVIG-A-NPGMLRQKLRDI 121 (125)
T ss_dssp HHHHTTCCSSSEEEEEETT-EEEEEEES-S-CHHHHHHHHHHH
T ss_pred HHHHcCCCcccEEEEEeCC-eEEEEEeC-C-CHHHHHHHHHHH
Confidence 999999986 999999742 22345778 6 788999998753
No 35
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.69 E-value=1.8e-07 Score=71.42 Aligned_cols=101 Identities=15% Similarity=0.303 Sum_probs=79.4
Q ss_pred CCCceeecCHHHHHHhHhC--CCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeee
Q psy7942 27 GPPAKEFTSVDEIKAFIAD--SKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~--~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
...+..+++.++++.++++ +++++|.|+.+||. ...+.|.+++..++++.|. .|| .
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~--------------~vd-----~ 71 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELPQVSFV--------------KLE-----A 71 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----T
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcCCeEEE--------------EEE-----C
Confidence 3457788889999999987 89999999999984 5567888889888788887 455 6
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
..+++++++|++.. |++++|++ .+....+.| . +.+.|.+||....
T Consensus 72 ~~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G-~-~~~~l~~~i~~~l 117 (153)
T 2wz9_A 72 EGVPEVSEKYEISSVPTFLFFKN-SQKIDRLDG-A-HAPELTKKVQRHA 117 (153)
T ss_dssp TTSHHHHHHTTCCSSSEEEEEET-TEEEEEEES-S-CHHHHHHHHHHHS
T ss_pred CCCHHHHHHcCCCCCCEEEEEEC-CEEEEEEeC-C-CHHHHHHHHHHHh
Confidence 66788999999986 99999993 222334567 5 6788999998764
No 36
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.69 E-value=2.4e-07 Score=64.94 Aligned_cols=97 Identities=22% Similarity=0.427 Sum_probs=75.7
Q ss_pred ceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..+++.+++++.++ .+++++|.|+.+||. ...+.+.+++..++++.|. .++ ...+
T Consensus 1 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~--------------~v~-----~~~~ 61 (104)
T 2vim_A 1 MRVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFA--------------KVD-----VDQN 61 (104)
T ss_dssp CEECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TTTC
T ss_pred CeecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCCCCEEE--------------EEe-----ccCC
Confidence 356888899999888 688999999999984 4567888888888778887 344 5567
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|++.. |++++|+++ .....+.| . +.+.|.+||...
T Consensus 62 ~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G-~-~~~~l~~~l~~~ 103 (104)
T 2vim_A 62 EEAAAKYSVTAMPTFVFIKDG-KEVDRFSG-A-NETKLRETITRH 103 (104)
T ss_dssp HHHHHHTTCCSSSEEEEEETT-EEEEEEES-S-CHHHHHHHHHHH
T ss_pred HHHHHHcCCccccEEEEEeCC-cEEEEEeC-C-CHHHHHHHHHhh
Confidence 78999999986 999999842 22345678 6 888999999753
No 37
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.69 E-value=1.5e-07 Score=66.93 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=75.6
Q ss_pred CceeecCHHHHHHhH--hCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAFI--ADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~--~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..+.+.+++++.+ .++++++|.|+.+||. ...+.+.+++..++++.|. .+| ...
T Consensus 2 ~v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~ 62 (107)
T 1gh2_A 2 GVKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFL--------------EVD-----VHQ 62 (107)
T ss_dssp CEEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TTT
T ss_pred ceEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHCCCcEEE--------------EEE-----Ccc
Confidence 356788889999988 4688999999999984 5567888899888778887 454 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....+.|. ..+.|.+||...
T Consensus 63 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 105 (107)
T 1gh2_A 63 CQGTAATNNISATPTFQFFRNK-VRIDQYQGA--DAVGLEEKIKQH 105 (107)
T ss_dssp SHHHHHHTTCCSSSEEEEEETT-EEEEEEESS--CHHHHHHHHHHH
T ss_pred CHHHHHhcCCCcccEEEEEECC-eEEEEEeCC--CHHHHHHHHHHh
Confidence 788999999986 999999753 223457784 445699998753
No 38
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.68 E-value=2.4e-07 Score=65.23 Aligned_cols=97 Identities=20% Similarity=0.304 Sum_probs=76.8
Q ss_pred ceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..+++.+++++.++ ++++++|.|+.+||. ...+.+.+++.+++++.|. .+| ...+
T Consensus 2 v~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~~ 62 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFL--------------EVD-----VDDC 62 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTSEEE--------------EEE-----TTTC
T ss_pred eEEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccCeEEE--------------EEE-----hhhh
Confidence 457889999999998 789999999999984 5567888889988778887 455 5667
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|++.. |++++|+++ +....+.|. +.+.|.+||...
T Consensus 63 ~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~--~~~~l~~~l~~~ 104 (105)
T 3m9j_A 63 QDVASESEVKSMPTFQFFKKG-QKVGEFSGA--NKEKLEATINEL 104 (105)
T ss_dssp HHHHHHTTCCBSSEEEEEETT-EEEEEEESS--CHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCcEEEEEECC-eEEEEEeCC--CHHHHHHHHHHh
Confidence 88999999986 999999752 223346676 788999998753
No 39
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.67 E-value=3.1e-07 Score=64.65 Aligned_cols=97 Identities=20% Similarity=0.339 Sum_probs=76.3
Q ss_pred ceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 30 AKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 30 v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+..+++.+++++.++ ++++++|.|+.+||. ...+.|.+++..+ +++.|. .++ ...
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~ 62 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVL--------------KVD-----VDE 62 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEE--------------EEE-----TTT
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEE--------------EEe-----ccc
Confidence 457888889998887 788999999999984 4567888889888 678887 444 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....+.| . +.+.|.+||...
T Consensus 63 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g-~-~~~~l~~~i~~~ 105 (106)
T 1xwb_A 63 CEDIAMEYNISSMPTFVFLKNG-VKVEEFAG-A-NAKRLEDVIKAN 105 (106)
T ss_dssp CHHHHHHTTCCSSSEEEEEETT-EEEEEEES-C-CHHHHHHHHHHT
T ss_pred hHHHHHHcCCCcccEEEEEcCC-cEEEEEcC-C-CHHHHHHHHHHh
Confidence 788999999986 999999752 22345778 6 788899999764
No 40
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.65 E-value=2.4e-07 Score=76.42 Aligned_cols=153 Identities=11% Similarity=0.118 Sum_probs=105.9
Q ss_pred ecCHHHHHHhHhC-CCeEEEEEecCC--C---hhHHHHHHHHHhhCCC------ceEEecchhhHHHHhhhhccccceee
Q psy7942 33 FTSVDEIKAFIAD-SKVVVAGLFKDA--S---SELAKTFNEIASKVDD------LVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 33 l~s~~~~~~~~~~-~~v~~V~f~~~~--~---~~~~~~f~~~A~~~~~------~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
.++.++++.+++. ...++|.||.+| | ..+.+.+.++|+.++. +.|. .+|
T Consensus 11 ~~~~~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~--------------~vd----- 71 (243)
T 2hls_A 11 EDFRRELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLN--------------VYY----- 71 (243)
T ss_dssp HHHHHHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEE--------------EEE-----
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEE--------------Eec-----
Confidence 3456788888865 344555566666 4 3456677888877654 7777 344
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc----CCCceeeeCcchHHHhhccCCcceEEE
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ----SLPLVVEFNHETAQKIFGGEIKSHLLV 175 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~----~~P~v~~~~~~~~~~~~~~~~~~~lll 175 (216)
...+++++++|+++. |++++| + + ...|.|.. ....+..|+... ..+ ..++.++...+-+...+..++.
T Consensus 72 ~d~~~~~~~~~gv~~~Pt~~i~-~--g-~~~~~G~~-~~~~l~~fv~~~l~~~~~~--~~l~~~~~~~~~~~~~~~~vv~ 144 (243)
T 2hls_A 72 RESDSDKFSEFKVERVPTVAFL-G--G-EVRWTGIP-AGEEIRALVEVIMRLSEDE--SGLEDATKEALKSLKGRVHIET 144 (243)
T ss_dssp TTTTHHHHHHTTCCSSSEEEET-T--T-TEEEESCC-CTTHHHHHHHHHHHHHTTC--CCCCHHHHHHHHHCCSCEEEEE
T ss_pred CCcCHHHHHhcCCCcCCEEEEE-C--C-ceeEcCCC-cHHHHHHHHHHHHhccCCC--CCCCHHHHHHHHHcCCCcEEEE
Confidence 556788999999987 999998 3 3 67788876 667788887653 222 2345555554433322344666
Q ss_pred EEeCCccchhhhhHHHHHHHHhcc----CceEEEEcCCCC
Q psy7942 176 FFSKAAGHYESHFEPVQTVAKDFR----EKEEQDEDDDQP 211 (216)
Q Consensus 176 f~~~~~~~~~~~~~~l~~vA~~~r----~~~~f~~~d~~~ 211 (216)
|+.++++.+......+.++|.++. +++.+..+|...
T Consensus 145 F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~ 184 (243)
T 2hls_A 145 IITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE 184 (243)
T ss_dssp EECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT
T ss_pred EECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc
Confidence 888899999999999999999994 578888887653
No 41
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.64 E-value=4e-07 Score=66.10 Aligned_cols=99 Identities=19% Similarity=0.299 Sum_probs=77.3
Q ss_pred CCceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 28 PPAKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
++.....+.++++++++ .+++++|.|+.+||. ...+.+.+++.++.++.|. .|| ..
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~--------------~vd-----~d 71 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFL--------------EVD-----VD 71 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEE--------------EEE-----TT
T ss_pred CcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE--------------EEE-----CC
Confidence 34456678899999998 799999999999984 5567888899888668887 455 66
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+++++++|++.. |++++|+++ +....+.|. +.+.|.+||...
T Consensus 72 ~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 115 (116)
T 3qfa_C 72 DCQDVASECEVKSMPTFQFFKKG-QKVGEFSGA--NKEKLEATINEL 115 (116)
T ss_dssp TTHHHHHHTTCCSSSEEEEESSS-SEEEEEESC--CHHHHHHHHHHH
T ss_pred CCHHHHHHcCCccccEEEEEeCC-eEEEEEcCC--CHHHHHHHHHHh
Confidence 7788999999986 999999642 223446676 788999998753
No 42
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.62 E-value=2e-07 Score=69.40 Aligned_cols=101 Identities=21% Similarity=0.377 Sum_probs=79.5
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-C---CceEEecchhhHHHHhhhhccccceeeec
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-D---DLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~---~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
+..| +.++++..+..+++++|.|+.+||. ...+.|.+++..+ + .+.|+ .+| ..
T Consensus 19 v~~l-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~--------------~vd-----~~ 78 (140)
T 2dj1_A 19 VWVL-NDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVA--------------KID-----AT 78 (140)
T ss_dssp EEEC-CTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEE--------------EEC-----TT
T ss_pred CEEc-ChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEE--------------EEe-----Cc
Confidence 5566 4578888998899999999999984 4567888888876 3 37777 455 66
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCce
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLV 153 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v 153 (216)
.+.+++++|++.. |++++|++ +....|.|.. +.+.|.+||....-+..
T Consensus 79 ~~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~g~~-~~~~l~~~l~~~~~~~~ 127 (140)
T 2dj1_A 79 SASMLASKFDVSGYPTIKILKK--GQAVDYDGSR-TQEEIVAKVREVSQPDW 127 (140)
T ss_dssp TCHHHHHHTTCCSSSEEEEEET--TEEEECCSCC-CHHHHHHHHHHHHSSSC
T ss_pred ccHHHHHHCCCCccCeEEEEEC--CcEEEcCCCC-CHHHHHHHHHHhcCCCC
Confidence 6788999999986 99999975 3366789998 99999999998754433
No 43
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.61 E-value=3.6e-07 Score=64.83 Aligned_cols=97 Identities=22% Similarity=0.331 Sum_probs=75.4
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC----CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV----DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~----~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.+..++ .+++++.+. +++++|.|+.+||. ...+.|.+++..+ ..+.|+ .+| .
T Consensus 6 ~v~~l~-~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~ 64 (111)
T 3uvt_A 6 TVLALT-ENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIA--------------EVD-----C 64 (111)
T ss_dssp CSEECC-TTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEE--------------EEE-----T
T ss_pred cceEcC-hhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEE--------------EEe-----c
Confidence 455664 578888887 77899999999984 5567888888876 356776 454 6
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|++. +....|.|.. +.+.|.+||..+
T Consensus 65 ~~~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~~ 110 (111)
T 3uvt_A 65 TAERNICSKYSVRGYPTLLLFRGG-KKVSEHSGGR-DLDSLHRFVLSQ 110 (111)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEETT-EEEEEECSCC-SHHHHHHHHHHH
T ss_pred cccHhHHHhcCCCcccEEEEEeCC-cEEEeccCCc-CHHHHHHHHHhc
Confidence 67788999999986 999999753 2345688998 999999999875
No 44
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.61 E-value=1.7e-07 Score=75.42 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=91.3
Q ss_pred cccCCCCCChHHHHHHHHhhhC--CCceeecCHHHHHHhHhCCCeE-EEEEecCCCh---hHHHHHHHHHhhCC-----C
Q psy7942 6 PGERRGGRTAEDIVNWLLKKTG--PPAKEFTSVDEIKAFIADSKVV-VAGLFKDASS---ELAKTFNEIASKVD-----D 74 (216)
Q Consensus 6 ~~~Y~G~Rta~~iv~~l~~~~~--~~v~~l~s~~~~~~~~~~~~v~-~V~f~~~~~~---~~~~~f~~~A~~~~-----~ 74 (216)
+..|.|.++.+.+.+|+.+... ..+..+ +.+.++.+...++.+ +|.|+.+||. ...+.+.+++..+. +
T Consensus 92 ~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l-~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~ 170 (226)
T 1a8l_A 92 GVRYFGLPAGHEFAAFLEDIVDVSREETNL-MDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGK 170 (226)
T ss_dssp SEEEESCCCTTHHHHHHHHHHHHHHTCCCC-CHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eEEEeccCcHHHHHHHHHHHHhhcCCCCCC-CHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCc
Confidence 3579999999999999988653 223344 456777776655554 9999999984 55678888888763 6
Q ss_pred ceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 75 LVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 75 ~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+.|+ .+| ...+++++++|++.+ |++++|+++. ....|.|.. +.+.|.+||...
T Consensus 171 v~~~--------------~vd-----~~~~~~l~~~~~v~~~Pt~~~~~~G~-~~~~~~G~~-~~~~l~~~l~~~ 224 (226)
T 1a8l_A 171 ILGD--------------MVE-----AIEYPEWADQYNVMAVPKIVIQVNGE-DRVEFEGAY-PEKMFLEKLLSA 224 (226)
T ss_dssp EEEE--------------EEE-----GGGCHHHHHHTTCCSSCEEEEEETTE-EEEEEESCC-CHHHHHHHHHHH
T ss_pred EEEE--------------EEE-----cccCHHHHHhCCCcccCeEEEEeCCc-eeEEEcCCC-CHHHHHHHHHHh
Confidence 7777 455 667788999999986 9999998532 345688998 889999999753
No 45
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.61 E-value=2.4e-07 Score=66.64 Aligned_cols=99 Identities=21% Similarity=0.260 Sum_probs=76.6
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..++. +++++.+ .+++++|.|+.+|| ....+.+.+++..+ +++.|. .++ ...++
T Consensus 3 v~~l~~-~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~--------------~vd-----~~~~~ 61 (112)
T 2voc_A 3 IVKATD-QSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIV--------------KID-----VDENQ 61 (112)
T ss_dssp CEECCT-TTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEE--------------EEE-----TTTCC
T ss_pred eEEecH-HHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEE--------------EEE-----CCCCH
Confidence 455654 7788888 88999999999997 45677888888887 567777 344 55677
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCC
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLP 151 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P 151 (216)
+++++|++.. |++++|+++ .....|.|.. +.+.|.+|+..+.-|
T Consensus 62 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 62 ETAGKYGVMSIPTLLVLKDG-EVVETSVGFK-PKEALQELVNKHLLE 106 (112)
T ss_dssp SHHHHTTCCSBSEEEEEETT-EEEEEEESCC-CHHHHHHHHHTTSCS
T ss_pred HHHHHcCCCcccEEEEEeCC-EEEEEEeCCC-CHHHHHHHHHHHHHh
Confidence 8999999986 999999642 2234578998 999999999987544
No 46
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.59 E-value=3.7e-07 Score=66.20 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=76.4
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
.+..+++.++++++++++++++|.|+.+||. ...+.+.+++.++.++.|. .++ ...++
T Consensus 13 ~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~v~~~--------------~vd-----~~~~~ 73 (114)
T 2oe3_A 13 SITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFV--------------KCD-----VDESP 73 (114)
T ss_dssp GSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTTSEEE--------------EEE-----TTTCH
T ss_pred heeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE--------------EEE-----CCCCH
Confidence 3568889999999999999999999999984 4567888889888668887 444 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++++|++.. |++++|+++ .....+.|.. .+.|.+||..
T Consensus 74 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~--~~~l~~~l~~ 113 (114)
T 2oe3_A 74 DIAKECEVTAMPTFVLGKDG-QLIGKIIGAN--PTALEKGIKD 113 (114)
T ss_dssp HHHHHTTCCSBSEEEEEETT-EEEEEEESSC--HHHHHHHHHT
T ss_pred HHHHHCCCCcccEEEEEeCC-eEEEEEeCCC--HHHHHHHHHh
Confidence 8999999986 999999742 2233467764 7889999875
No 47
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.59 E-value=6.7e-07 Score=64.13 Aligned_cols=100 Identities=19% Similarity=0.331 Sum_probs=76.7
Q ss_pred CCCceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 27 GPPAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.|+.....+.+++++.++.+++++|.|+.+||. ...+.+.+++..+.++.|. .++ ...
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~v~~~--------------~vd-----~~~ 67 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFI--------------KVD-----VDE 67 (112)
T ss_dssp --CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TTT
T ss_pred ceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCEEE--------------EEE-----CCC
Confidence 345566778899999999999999999999984 5567888888888778887 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ .....+.|. +.+.|.+||...
T Consensus 68 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 110 (112)
T 1syr_A 68 VSEVTEKENITSMPTFKVYKNG-SSVDTLLGA--NDSALKQLIEKY 110 (112)
T ss_dssp THHHHHHTTCCSSSEEEEEETT-EEEEEEESC--CHHHHHHHHHTT
T ss_pred CHHHHHHcCCCcccEEEEEECC-cEEEEEeCC--CHHHHHHHHHHh
Confidence 778999999986 999999842 223346675 788999999764
No 48
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.58 E-value=3.9e-07 Score=64.29 Aligned_cols=99 Identities=19% Similarity=0.281 Sum_probs=77.9
Q ss_pred CCceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 28 PPAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+.+..+ +.+++++.+.++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...
T Consensus 4 ~~v~~l-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~ 63 (109)
T 3tco_A 4 DVTLVL-TEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFG--------------RLN-----VDE 63 (109)
T ss_dssp CCCEEC-CTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEE--------------EEE-----TTT
T ss_pred CeEEEe-cHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEE--------------EEc-----ccc
Confidence 345555 4588999998999999999999984 5567888889888 478887 444 567
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ .....|.|.. +.+.|.+||...
T Consensus 64 ~~~~~~~~~i~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~~ 107 (109)
T 3tco_A 64 NQKIADKYSVLNIPTTLIFVNG-QLVDSLVGAV-DEDTLESTVNKY 107 (109)
T ss_dssp CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred CHHHHHhcCcccCCEEEEEcCC-cEEEeeeccC-CHHHHHHHHHHH
Confidence 788999999986 999999642 2345588988 899999999764
No 49
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=98.58 E-value=1.9e-07 Score=71.10 Aligned_cols=106 Identities=13% Similarity=0.072 Sum_probs=69.0
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCC--C---hhHHHHHHHHHhhCCCce--EEecchhhHHHHhhhhccccceeee
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDA--S---SELAKTFNEIASKVDDLV--FDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~--~---~~~~~~f~~~A~~~~~~~--F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.+..+++ +++++++.+++.++|.|+.+| | ..+.+.|.++|++++.+. |+ .|| .
T Consensus 18 ~~~~l~~-~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~~~v~~~~~--------------~Vd-----~ 77 (142)
T 2es7_A 18 GWQPVEA-STVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREFPQFDWQVA--------------VAD-----L 77 (142)
T ss_dssp TCEECCC-C--------CCSEEEEECCCSCC----CCHHHHHHHHHHTCTTSCCEEE--------------EEC-----H
T ss_pred cCccccc-ccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHhcccceeEE--------------EEE-----C
Confidence 5667765 889999988777888777665 3 457889999998886677 77 555 6
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeee
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEF 156 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~ 156 (216)
..+++++.+|+|.. |++++|+++ +....|.|.. +.+.|.+||....-+.....
T Consensus 78 d~~~~la~~~~V~~iPT~~~fk~G-~~v~~~~G~~-~~~~l~~~i~~~l~~~~~~~ 131 (142)
T 2es7_A 78 EQSEAIGDRFNVRRFPATLVFTDG-KLRGALSGIH-PWAELLTLMRSIVDTPAAQE 131 (142)
T ss_dssp HHHHHHHHTTTCCSSSEEEEESCC-----CEESCC-CHHHHHHHHHHHHC------
T ss_pred CCCHHHHHhcCCCcCCeEEEEeCC-EEEEEEeCCC-CHHHHHHHHHHHhcccccCC
Confidence 66788999999986 999999753 3345688988 88999999988654444433
No 50
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.58 E-value=5.6e-07 Score=66.03 Aligned_cols=99 Identities=15% Similarity=0.257 Sum_probs=77.2
Q ss_pred CceeecCHHHHHH-hHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKA-FIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~-~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..++. ++++. +++++++++|.|+.+|| ....+.+.+++..+ +.+.|+ .++ ...
T Consensus 18 ~v~~l~~-~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~ 77 (130)
T 2dml_A 18 DVIELTP-SNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVG--------------AVN-----ADK 77 (130)
T ss_dssp SSEECCT-TTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEE--------------EEE-----TTT
T ss_pred CcEECCH-HHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEE--------------EEe-----CCC
Confidence 3556654 67776 45678899999999997 56778899999988 457777 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|++.......|.|.. +.+.|.+||...
T Consensus 78 ~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~-~~~~l~~~l~~~ 122 (130)
T 2dml_A 78 HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGR-TGEAIVDAALSA 122 (130)
T ss_dssp CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCC-SHHHHHHHHHHH
T ss_pred CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCC-CHHHHHHHHHHH
Confidence 788999999986 99999987444356789988 899999999764
No 51
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.57 E-value=5.8e-07 Score=64.01 Aligned_cols=99 Identities=16% Similarity=0.216 Sum_probs=76.4
Q ss_pred CCceeecCHHHHHHhHhC----CCeEEEEEecCCCh---hHHHHHHHHHhhCC-CceEEecchhhHHHHhhhhcccccee
Q psy7942 28 PPAKEFTSVDEIKAFIAD----SKVVVAGLFKDASS---ELAKTFNEIASKVD-DLVFDASSELAKTFNEIASKVDDLVF 99 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~----~~v~~V~f~~~~~~---~~~~~f~~~A~~~~-~~~F~~~~~~~~~~~~~~~~~~~~~~ 99 (216)
..+..+++.+++++.+.. +++++|.|+.+||. ...+.|.+++..+. ++.|. .++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~vd---- 63 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFL--------------KVD---- 63 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEE--------------EEE----
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEE--------------EEE----
Confidence 357788889999998875 88999999999984 45678888888884 78887 344
Q ss_pred eecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 100 VTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 100 ~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++|+++ .....+.|. +.+.|.+||...
T Consensus 64 -~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 109 (112)
T 1ep7_A 64 -VDAVAAVAEAAGITAMPTFHVYKDG-VKADDLVGA--SQDKLKALVAKH 109 (112)
T ss_dssp -TTTTHHHHHHHTCCBSSEEEEEETT-EEEEEEESC--CHHHHHHHHHHH
T ss_pred -CCchHHHHHHcCCCcccEEEEEECC-eEEEEEcCC--CHHHHHHHHHHH
Confidence 556788999999986 999999742 223346775 678899998754
No 52
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.56 E-value=5.2e-07 Score=63.46 Aligned_cols=98 Identities=19% Similarity=0.234 Sum_probs=76.2
Q ss_pred CCceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 28 PPAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.++..++ .+++++.+ ++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...
T Consensus 3 ~~v~~l~-~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~ 61 (106)
T 3die_A 3 MAIVKVT-DADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADIL--------------KLD-----VDE 61 (106)
T ss_dssp CCCEECC-TTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTT
T ss_pred cceEECC-HHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEE--------------EEE-----CCc
Confidence 3456664 57888888 889999999999984 5567888999888 457777 344 567
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 62 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~-~~~~l~~~l~~~ 105 (106)
T 3die_A 62 NPSTAAKYEVMSIPTLIVFKDG-QPVDKVVGFQ-PKENLAEVLDKH 105 (106)
T ss_dssp CHHHHHHTTCCSBSEEEEEETT-EEEEEEESCC-CHHHHHHHHHTT
T ss_pred CHHHHHhCCCcccCEEEEEeCC-eEEEEEeCCC-CHHHHHHHHHHh
Confidence 788999999987 999999842 2234678988 899999999764
No 53
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.56 E-value=5.3e-07 Score=62.87 Aligned_cols=95 Identities=22% Similarity=0.333 Sum_probs=73.7
Q ss_pred eecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHHH
Q psy7942 32 EFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADIL 108 (216)
Q Consensus 32 ~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~ 108 (216)
.++ .+++++.++++++++|.|+.+||. ...+.+.+++..+.++.|. .++ ...+++++
T Consensus 3 ~l~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~~~~~~ 62 (104)
T 2e0q_A 3 HLD-SKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQVGFG--------------KLN-----SDENPDIA 62 (104)
T ss_dssp ECC-TTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TTTCHHHH
T ss_pred ecC-HHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCCceEE--------------EEE-----CCCCHHHH
Confidence 444 467888888899999999999984 4567888888888558887 344 55678899
Q ss_pred HhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 109 AEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 109 ~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++|++.. |++++|+++ +....|.|.. +.+.|.+||...
T Consensus 63 ~~~~v~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~~ 101 (104)
T 2e0q_A 63 ARYGVMSLPTVIFFKDG-EPVDEIIGAV-PREEIEIRIKNL 101 (104)
T ss_dssp HHTTCCSSCEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred HhCCccccCEEEEEECC-eEhhhccCCC-CHHHHHHHHHHH
Confidence 9999986 999999642 2234678988 899999999764
No 54
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.56 E-value=8.2e-07 Score=65.31 Aligned_cols=99 Identities=17% Similarity=0.244 Sum_probs=76.3
Q ss_pred CCceeecCHHHHHHhHhC----CCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceee
Q psy7942 28 PPAKEFTSVDEIKAFIAD----SKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~----~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
..+..|.+.++++..++. +++++|.|+.+||. ...+.+.+++.++.++.|. .++
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~--------------~vd----- 76 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL--------------KVD----- 76 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCSSEEEE--------------EEE-----
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEE--------------EEE-----
Confidence 346788899999887764 88999999999984 4567888888888777777 344
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++|+++ +....+.| . +.+.|.+||...
T Consensus 77 ~d~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G-~-~~~~l~~~l~~~ 122 (124)
T 1xfl_A 77 TDELKSVASDWAIQAMPTFMFLKEG-KILDKVVG-A-KKDELQSTIAKH 122 (124)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEEETT-EEEEEEES-C-CHHHHHHHHHHH
T ss_pred CccCHHHHHHcCCCccCEEEEEECC-EEEEEEeC-C-CHHHHHHHHHHh
Confidence 556788999999986 999999742 22334677 5 788999998763
No 55
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.55 E-value=4.8e-07 Score=64.85 Aligned_cols=101 Identities=18% Similarity=0.348 Sum_probs=77.6
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhCC----CceEEecchhhHHHHhhhhccccceeeec
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKVD----DLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~~----~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
+..++ .++++..++++++++|.|+.+|| ....+.|.+++..+. .+.|+ .+| ..
T Consensus 9 v~~l~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~--------------~vd-----~~ 68 (120)
T 1mek_A 9 VLVLR-KSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLA--------------KVD-----AT 68 (120)
T ss_dssp EEECC-TTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCE--------------EEE-----TT
T ss_pred cEEec-hhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEE--------------EEc-----CC
Confidence 45564 47888888889999999999987 456788888888772 46666 344 55
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCC-CcccccCCCCCHHHHHHHHhhcCCC
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDE-GRVNYEGPASDEAALRKFLSTQSLP 151 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de-~~~~y~G~~~~~~~l~~fi~~~~~P 151 (216)
.+++++++|++.. |++++|+++.. ....|.|.. +.+.|.+||....-|
T Consensus 69 ~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~-~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 69 EESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGR-EADDIVNWLKKRTGP 118 (120)
T ss_dssp TCCSSHHHHTCCSSSEEEEEESSCSSSCEECCCCS-SHHHHHHHHHTTSCC
T ss_pred CCHHHHHHCCCCcccEEEEEeCCCcCCcccccCcc-CHHHHHHHHHhccCC
Confidence 5678899999986 99999975332 126788988 999999999987644
No 56
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.55 E-value=4e-07 Score=72.99 Aligned_cols=106 Identities=20% Similarity=0.283 Sum_probs=83.8
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..+ +.++++..+..+++++|.|+.+||. ...+.|.+++..+ +.+.|+ .|+ +..++
T Consensus 99 v~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~--------------~vd-----~~~~~ 158 (210)
T 3apq_A 99 IITL-ERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIG--------------AVN-----CGDDR 158 (210)
T ss_dssp SEEC-CHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEE--------------EEE-----TTTCH
T ss_pred eEEe-cHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEE--------------EEE-----CCccH
Confidence 4455 5688888888899999999999984 5567889999888 568887 455 66778
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeeeC
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEFN 157 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~~ 157 (216)
+++++|++.. |++++|+++ .....|.|.. +.+.|.+||....-+.+.+++
T Consensus 159 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 159 MLCRMKGVNSYPSLFIFRSG-MAAVKYNGDR-SKESLVAFAMQHVRSTVTELS 209 (210)
T ss_dssp HHHHHTTCCSSSEEEEECTT-SCCEECCSCC-CHHHHHHHHHHHHHCCSSCC-
T ss_pred HHHHHcCCCcCCeEEEEECC-CceeEecCCC-CHHHHHHHHHHhCcccceecC
Confidence 8999999986 999999653 3356789988 999999999987666666554
No 57
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.55 E-value=6.3e-07 Score=63.08 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=74.2
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..+++ ++++..++++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...++
T Consensus 2 v~~l~~-~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~--------------~v~-----~~~~~ 61 (105)
T 1nsw_A 2 TMTLTD-ANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVA--------------KLN-----VDENP 61 (105)
T ss_dssp CEEECT-TTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEE--------------EEE-----TTTCH
T ss_pred ceeccH-HhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEE--------------EEE-----CcCCH
Confidence 445654 67788888889999999999984 4567888888888 457777 344 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++|++.. |++++|+++ .....+.|.. +.+.|.+||...
T Consensus 62 ~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 103 (105)
T 1nsw_A 62 ETTSQFGIMSIPTLILFKGG-RPVKQLIGYQ-PKEQLEAQLADV 103 (105)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHTTTT
T ss_pred HHHHHcCCccccEEEEEeCC-eEEEEEecCC-CHHHHHHHHHHH
Confidence 8999999986 999999642 2234578888 889999998754
No 58
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.55 E-value=9.7e-07 Score=63.21 Aligned_cols=97 Identities=20% Similarity=0.345 Sum_probs=76.7
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNAD 106 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 106 (216)
.....+.++++..++++++++|.|+.+||. ...+.+.+++.++.++.|. .++ ...+++
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~~~~~--------------~vd-----~~~~~~ 68 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFY--------------KLD-----VDELGD 68 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TTTCHH
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCCCEEE--------------EEE-----CCCCHH
Confidence 445678899999999999999999999984 5567888889888778887 454 567788
Q ss_pred HHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 107 ILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 107 v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++|++.. |++++|++ .+....+.|. +.+.|.+||...
T Consensus 69 l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~--~~~~l~~~i~~~ 108 (109)
T 3f3q_A 69 VAQKNEVSAMPTLLLFKN-GKEVAKVVGA--NPAAIKQAIAAN 108 (109)
T ss_dssp HHHHTTCCSSSEEEEEET-TEEEEEEESS--CHHHHHHHHHHH
T ss_pred HHHHcCCCccCEEEEEEC-CEEEEEEeCC--CHHHHHHHHHhh
Confidence 999999986 99999984 2223456676 458899998764
No 59
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.53 E-value=7.2e-07 Score=62.80 Aligned_cols=97 Identities=19% Similarity=0.257 Sum_probs=74.9
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..++ .++++.+++.+++++|.|+.+||. ...+.+.+++..+ +++.|. .++ ...++
T Consensus 3 v~~l~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~~~ 62 (109)
T 2yzu_A 3 PIEVT-DQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVA--------------KLD-----VDENP 62 (109)
T ss_dssp CEECC-TTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEE--------------EEE-----TTTCH
T ss_pred ceEcc-HhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEE--------------EEE-----CCCCH
Confidence 34554 467778888899999999999984 4567888889888 468887 444 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++|++.. |++++|+++ .....|.|.. +.+.|.+||...
T Consensus 63 ~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~~ 104 (109)
T 2yzu_A 63 KTAMRYRVMSIPTVILFKDG-QPVEVLVGAQ-PKRNYQAKIEKH 104 (109)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHTT
T ss_pred hHHHhCCCCcCCEEEEEeCC-cEeeeEeCCC-CHHHHHHHHHHH
Confidence 8999999986 999999642 2234578988 899999999865
No 60
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.53 E-value=6.5e-07 Score=64.64 Aligned_cols=96 Identities=22% Similarity=0.332 Sum_probs=74.9
Q ss_pred ceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..+++.+++++.++ .+++++|.|+.+||. ...+.+.+++..+ ++.|. .+| ...+
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~--------------~vd-----~~~~ 74 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY-DAIFV--------------KVD-----VDKL 74 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS-SSEEE--------------EEE-----TTTS
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc-CcEEE--------------EEE-----CCcc
Confidence 667888789998887 688999999999984 4567888888887 77777 344 5567
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|++.. |++++|+++ .....+.| . +.+.|.+||...
T Consensus 75 ~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G-~-~~~~l~~~l~~~ 116 (117)
T 2xc2_A 75 EETARKYNISAMPTFIAIKNG-EKVGDVVG-A-SIAKVEDMIKKF 116 (117)
T ss_dssp HHHHHHTTCCSSSEEEEEETT-EEEEEEES-S-CHHHHHHHHHHH
T ss_pred HHHHHHcCCCccceEEEEeCC-cEEEEEeC-C-CHHHHHHHHHHh
Confidence 88999999986 999999742 22345678 6 788999998753
No 61
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.53 E-value=6.2e-07 Score=63.15 Aligned_cols=98 Identities=12% Similarity=0.223 Sum_probs=73.2
Q ss_pred CceeecCHHHHHHh-HhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAF-IADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~-~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..++. ++++.. .+++++++|.|+.+||. ...+.+.+++..+ +++.|. .++ ...
T Consensus 3 ~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~ 62 (107)
T 2i4a_A 3 HTLAVSD-SSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVA--------------KVN-----IDD 62 (107)
T ss_dssp CEEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEE--------------EEE-----TTT
T ss_pred ceeecch-hhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEE--------------EEE-----CCC
Confidence 3555654 566654 46788999999999984 5566888888887 467777 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ .....+.|.. +.+.|.+||...
T Consensus 63 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 106 (107)
T 2i4a_A 63 NPETPNAYQVRSIPTLMLVRDG-KVIDKKVGAL-PKSQLKAWVESA 106 (107)
T ss_dssp CCHHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHT
T ss_pred CHHHHHhcCCCccCEEEEEeCC-EEEEEecCCC-CHHHHHHHHHhc
Confidence 778999999986 999999642 2234578988 899999999864
No 62
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.52 E-value=7.2e-07 Score=64.43 Aligned_cols=100 Identities=23% Similarity=0.294 Sum_probs=75.3
Q ss_pred CCCceeecCHHHHH-HhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 27 GPPAKEFTSVDEIK-AFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 27 ~~~v~~l~s~~~~~-~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
...+..+++ +++. ..++++++++|.|+.+|| ....+.|.+++..+ +++.|. .++ .
T Consensus 11 ~~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~ 70 (121)
T 2i1u_A 11 KSATIKVTD-ASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVA--------------KLD-----V 70 (121)
T ss_dssp -CCSEECCT-TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----T
T ss_pred cccceecCH-HHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEE--------------EEE-----C
Confidence 445677765 4555 456678899999999998 45567888899888 568887 344 5
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 71 ~~~~~~~~~~~i~~~Pt~~~~~~g-~~~~~~~G~~-~~~~l~~~l~~~ 116 (121)
T 2i1u_A 71 DTNPETARNFQVVSIPTLILFKDG-QPVKRIVGAK-GKAALLRELSDV 116 (121)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHTCSC
T ss_pred CCCHHHHHhcCCCcCCEEEEEECC-EEEEEecCCC-CHHHHHHHHHHH
Confidence 56788999999986 999999842 2234578988 899999999865
No 63
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.52 E-value=4.8e-07 Score=68.87 Aligned_cols=108 Identities=13% Similarity=0.089 Sum_probs=82.6
Q ss_pred HHHHHHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCCh-----hHHHHHHHHHhhC-CC-ceEEecchhhHHHHh
Q psy7942 17 DIVNWLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASS-----ELAKTFNEIASKV-DD-LVFDASSELAKTFNE 89 (216)
Q Consensus 17 ~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~-----~~~~~f~~~A~~~-~~-~~F~~~~~~~~~~~~ 89 (216)
.|++=|... ....+ +.+++++.+.+..+++|.|+.+|+. ...+.+.++|..+ +. +.|+
T Consensus 9 pl~~rl~~~---g~~~~-t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~----------- 73 (140)
T 2qgv_A 9 ALWQRMLAR---GWTPV-SESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVA----------- 73 (140)
T ss_dssp HHHHHHHHT---TCEEC-CHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEE-----------
T ss_pred hHHHHHHhc---CCccC-CHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEE-----------
Confidence 344444444 44456 4689999888777888888888743 6788999999999 56 8998
Q ss_pred hhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 90 IASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 90 ~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
+|| ...+++++.+|+|.. ||+++||++.. .....|.. ..+.|.+||....
T Consensus 74 ---KVd-----vDe~~~lA~~ygV~sIPTlilFk~G~~-v~~~~G~~-~k~~l~~~i~~~l 124 (140)
T 2qgv_A 74 ---IAD-----LEQSEAIGDRFGAFRFPATLVFTGGNY-RGVLNGIH-PWAELINLMRGLV 124 (140)
T ss_dssp ---ECC-----HHHHHHHHHHHTCCSSSEEEEEETTEE-EEEEESCC-CHHHHHHHHHHHH
T ss_pred ---EEE-----CCCCHHHHHHcCCccCCEEEEEECCEE-EEEEecCC-CHHHHHHHHHHHh
Confidence 666 667889999999986 99999996432 34567887 8889999998653
No 64
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.51 E-value=1.3e-06 Score=62.71 Aligned_cols=100 Identities=20% Similarity=0.245 Sum_probs=76.8
Q ss_pred CCCceeecCHHHHHHhHhC----CCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhcccccee
Q psy7942 27 GPPAKEFTSVDEIKAFIAD----SKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVF 99 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~----~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~ 99 (216)
+..+..+.+.++++..+.. +++++|.|+.+||. ...+.+.+++..++++.|. .++
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~--------------~v~---- 66 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFL--------------KVD---- 66 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE----
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEE--------------EEE----
Confidence 3456788889999988765 78999999999984 4567888888888778777 344
Q ss_pred eecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 100 VTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 100 ~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++|+++ +....+.| . +.+.|.+||...
T Consensus 67 -~~~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g-~-~~~~l~~~l~~~ 112 (118)
T 2vm1_A 67 -VDELKDVAEAYNVEAMPTFLFIKDG-EKVDSVVG-G-RKDDIHTKIVAL 112 (118)
T ss_dssp -TTTSHHHHHHTTCCSBSEEEEEETT-EEEEEEES-C-CHHHHHHHHHHH
T ss_pred -cccCHHHHHHcCCCcCcEEEEEeCC-eEEEEecC-C-CHHHHHHHHHHH
Confidence 556778999999986 999999742 22334667 5 788999999764
No 65
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=8.3e-07 Score=65.17 Aligned_cols=98 Identities=20% Similarity=0.336 Sum_probs=75.1
Q ss_pred CceeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhC-----CCceEEecchhhHHHHhhhhcccccee
Q psy7942 29 PAKEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKV-----DDLVFDASSELAKTFNEIASKVDDLVF 99 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-----~~~~F~~~~~~~~~~~~~~~~~~~~~~ 99 (216)
.+..++. ++++..+ +++++++|.|+.+||. ...+.|.+++..+ +.+.|+ .+|
T Consensus 8 ~v~~l~~-~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~--------------~vd---- 68 (133)
T 1x5d_A 8 DVIELTD-DSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLA--------------AVD---- 68 (133)
T ss_dssp SCEECCT-THHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEE--------------EEE----
T ss_pred cCEEcCH-hhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEE--------------EEE----
Confidence 3566654 6777755 5788999999999984 4567788888776 357777 444
Q ss_pred eecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 100 VTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 100 ~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++|++ ......|.|.. +.+.|.+||...
T Consensus 69 -~~~~~~l~~~~~v~~~Pt~~~~~~-g~~~~~~~G~~-~~~~l~~~l~~~ 115 (133)
T 1x5d_A 69 -ATVNQVLASRYGIRGFPTIKIFQK-GESPVDYDGGR-TRSDIVSRALDL 115 (133)
T ss_dssp -TTTCCHHHHHHTCCSSSEEEEEET-TEEEEEECSCC-SHHHHHHHHHHH
T ss_pred -CCCCHHHHHhCCCCeeCeEEEEeC-CCceEEecCCC-CHHHHHHHHHHH
Confidence 556778999999986 99999997 33355688988 999999999864
No 66
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.51 E-value=6.4e-07 Score=65.37 Aligned_cols=99 Identities=21% Similarity=0.298 Sum_probs=76.2
Q ss_pred CCceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhCCC--ceEEecchhhHHHHhhhhccccceeeec
Q psy7942 28 PPAKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKVDD--LVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~~~--~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
..+..|++.+++++.++.+++++|.|+.+|| ....+.+.+++..+.. +.|. .++ ..
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~--------------~vd-----~d 75 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFY--------------KVD-----VD 75 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEE--------------EEE-----TT
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEE--------------EEE-----Cc
Confidence 4567899999999999889999999999997 4556788888887732 7776 344 55
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+++++++|++.. |++++|+++ .....+.|. +.+.|.+||...
T Consensus 76 ~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 119 (121)
T 2j23_A 76 EQSQIAQEVGIRAMPTFVFFKNG-QKIDTVVGA--DPSKLQAAITQH 119 (121)
T ss_dssp TCHHHHHHHTCCSSSEEEEEETT-EEEEEEESS--CHHHHHHHHHHH
T ss_pred CCHHHHHHcCCCcccEEEEEECC-eEEeeEcCC--CHHHHHHHHHHh
Confidence 6788999999986 999999742 223346775 678999999764
No 67
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.51 E-value=5.3e-07 Score=67.59 Aligned_cols=100 Identities=20% Similarity=0.225 Sum_probs=77.8
Q ss_pred CCCceeecCHHHHH-HhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 27 GPPAKEFTSVDEIK-AFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 27 ~~~v~~l~s~~~~~-~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
...+..++ .++++ .+++++++++|.|+.+||. ...+.+.+++..+ +.+.|+ .|+ .
T Consensus 5 ~~~v~~l~-~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~--------------~vd-----~ 64 (140)
T 3hz4_A 5 GSSIIEFE-DMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFG--------------RIN-----I 64 (140)
T ss_dssp TTTEEEEC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEE--------------EEE-----T
T ss_pred CcceEEcc-hHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEE--------------EEE-----C
Confidence 34566675 56777 6777899999999999984 5567888889888 458887 455 6
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ .....|.|.. +.+.|.+||...
T Consensus 65 ~~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 110 (140)
T 3hz4_A 65 ATNPWTAEKYGVQGTPTFKFFCHG-RPVWEQVGQI-YPSILKNAVRDM 110 (140)
T ss_dssp TTCHHHHHHHTCCEESEEEEEETT-EEEEEEESSC-CHHHHHHHHHHH
T ss_pred CcCHhHHHHCCCCcCCEEEEEeCC-cEEEEEcCCC-CHHHHHHHHHHH
Confidence 67889999999986 999999752 2234688988 899999999865
No 68
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.50 E-value=9.5e-07 Score=62.97 Aligned_cols=98 Identities=20% Similarity=0.293 Sum_probs=73.4
Q ss_pred CceeecCHHHHH-HhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIK-AFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~-~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..+++ +++. ..++++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...
T Consensus 6 ~v~~l~~-~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~ 65 (112)
T 1t00_A 6 TLKHVTD-DSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIV--------------KLN-----IDE 65 (112)
T ss_dssp CCEEECT-TTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTT
T ss_pred eEEecch-hhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEE--------------EEE-----cCC
Confidence 4567765 4554 4556788999999999984 4567888888888 567777 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 66 ~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 109 (112)
T 1t00_A 66 NPGTAAKYGVMSIPTLNVYQGG-EVAKTIVGAK-PKAAIVRDLEDF 109 (112)
T ss_dssp CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHTHHH
T ss_pred CHHHHHhCCCCcccEEEEEeCC-EEEEEEeCCC-CHHHHHHHHHHH
Confidence 788999999986 999999742 2234578988 889999998753
No 69
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.50 E-value=5.3e-07 Score=71.35 Aligned_cols=117 Identities=11% Similarity=0.161 Sum_probs=82.0
Q ss_pred hhCCCceeecCHHHHHHhHhC--CCeEEEEEec-------CCC---hhHHHHHHHHHhhC------CCceEEecchhhHH
Q psy7942 25 KTGPPAKEFTSVDEIKAFIAD--SKVVVAGLFK-------DAS---SELAKTFNEIASKV------DDLVFDASSELAKT 86 (216)
Q Consensus 25 ~~~~~v~~l~s~~~~~~~~~~--~~v~~V~f~~-------~~~---~~~~~~f~~~A~~~------~~~~F~~~~~~~~~ 86 (216)
.....+..|+ .+++++++.. +..++|.|.+ .|| ....+.|.++|..+ +.+.|+
T Consensus 15 ~~~~~vi~lt-~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~-------- 85 (178)
T 3ga4_A 15 KDDTGVITVT-ADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFF-------- 85 (178)
T ss_dssp CCTTSEEECC-TTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEE--------
T ss_pred hccCCCEECC-HHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEE--------
Confidence 3345677776 4788888864 3467888887 387 45577999999876 467788
Q ss_pred HHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCc-----------ccc---cC-CCCCHHHHHHHHhhcCC
Q psy7942 87 FNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGR-----------VNY---EG-PASDEAALRKFLSTQSL 150 (216)
Q Consensus 87 ~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~-----------~~y---~G-~~~~~~~l~~fi~~~~~ 150 (216)
+|| ...+++++.+|+|.. |+|++|++..... ..| .| .+ +.+.|.+||.+..-
T Consensus 86 ------kvD-----~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~-~ae~la~fi~~~t~ 153 (178)
T 3ga4_A 86 ------TVD-----VNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAE-NTLQFGDFLAKILN 153 (178)
T ss_dssp ------EEE-----TTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTT-CHHHHHHHHHHHHT
T ss_pred ------EEE-----CccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCc-CHHHHHHHHHHhcC
Confidence 666 777899999999987 9999999764322 345 35 66 89999999988654
Q ss_pred CceeeeCcchHH
Q psy7942 151 PLVVEFNHETAQ 162 (216)
Q Consensus 151 P~v~~~~~~~~~ 162 (216)
+.+.-..+-++.
T Consensus 154 ~~i~I~rp~ny~ 165 (178)
T 3ga4_A 154 ISITVPQAFNVQ 165 (178)
T ss_dssp CCCCCCCSCC--
T ss_pred CCccccCCCChH
Confidence 444333333443
No 70
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.50 E-value=1e-06 Score=62.82 Aligned_cols=100 Identities=18% Similarity=0.197 Sum_probs=75.7
Q ss_pred CCCceeecCHHHHHHh-HhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 27 GPPAKEFTSVDEIKAF-IADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~-~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
+..+..++ .+++++. ++.+++++|.|+.+|| ....+.|.+++..+ +.+.|. .++ .
T Consensus 6 ~~~v~~l~-~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~--------------~v~-----~ 65 (115)
T 1thx_A 6 SKGVITIT-DAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVV--------------KLE-----I 65 (115)
T ss_dssp CCSEEECC-GGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----S
T ss_pred cCceEEee-ccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEE--------------EEE-----c
Confidence 34566775 5777765 4678899999999997 45567888889888 468887 444 5
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ .....|.|.. +.+.|.+||...
T Consensus 66 ~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~-~~~~l~~~l~~~ 111 (115)
T 1thx_A 66 DPNPTTVKKYKVEGVPALRLVKGE-QILDSTEGVI-SKDKLLSFLDTH 111 (115)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred CCCHHHHHHcCCCceeEEEEEcCC-EEEEEecCCC-CHHHHHHHHHHH
Confidence 66788999999986 999999642 2234578988 899999999764
No 71
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.50 E-value=1.1e-06 Score=62.72 Aligned_cols=97 Identities=14% Similarity=0.220 Sum_probs=73.2
Q ss_pred ceeecCHHHHHHhHhC---CCeEEEEEecCCC---hhHHHHHHHHHhh--CCCceEEecchhhHHHHhhhhccccceeee
Q psy7942 30 AKEFTSVDEIKAFIAD---SKVVVAGLFKDAS---SELAKTFNEIASK--VDDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~---~~v~~V~f~~~~~---~~~~~~f~~~A~~--~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
+..|++.+++++.+.+ +++++|.|+.+|| ....+.+.+++.. .+++.|. .++ .
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~ 62 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFL--------------SID-----A 62 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEE--------------EEE-----T
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEE--------------EEe-----c
Confidence 5678888999999876 8899999999997 4557788888888 4678887 454 5
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ +....+.|.. ...|.+||...
T Consensus 63 ~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~--~~~l~~~l~~~ 107 (112)
T 3d6i_A 63 DENSEISELFEISAVPYFIIIHKG-TILKELSGAD--PKEYVSLLEDC 107 (112)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEETT-EEEEEECSCC--HHHHHHHHHHH
T ss_pred ccCHHHHHHcCCCcccEEEEEECC-EEEEEecCCC--HHHHHHHHHHH
Confidence 56788999999986 999999742 2233467764 45699998754
No 72
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.50 E-value=5.7e-07 Score=69.74 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=78.4
Q ss_pred HHHHHHHhhhCCCceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhh
Q psy7942 17 DIVNWLLKKTGPPAKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEI 90 (216)
Q Consensus 17 ~iv~~l~~~~~~~v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~ 90 (216)
+|...+.... +..|.+.+++++.+. ++++++|-|+++||. ...+.|.++|.++ +.+.|+
T Consensus 13 ~~~~~~~s~m---v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~------------ 77 (160)
T 2av4_A 13 GLVPRGSSFM---LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIY------------ 77 (160)
T ss_dssp ---------C---CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEE------------
T ss_pred cccccchhhh---hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEE------------
Confidence 4444444432 678999999987663 688999999999985 4467899999998 568888
Q ss_pred hhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcc----------cccCCCCCHHHHHHHHhhc
Q psy7942 91 ASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRV----------NYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 91 ~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~----------~y~G~~~~~~~l~~fi~~~ 148 (216)
++| ...+++++++|+|.. ||+++|++. ... ...|...+.+.|.++|...
T Consensus 78 --kVD-----VDe~~e~a~~y~V~siPT~~fFk~G--~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 78 --LVD-----ITEVPDFNTMYELYDPVSVMFFYRN--KHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp --EEE-----TTTCCTTTTTTTCCSSEEEEEEETT--EEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred --EEE-----CCCCHHHHHHcCCCCCCEEEEEECC--EEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 666 677889999999986 999999963 232 4667762388999998765
No 73
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.50 E-value=7.9e-07 Score=63.78 Aligned_cols=98 Identities=10% Similarity=0.234 Sum_probs=73.1
Q ss_pred eecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHHH
Q psy7942 32 EFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADIL 108 (216)
Q Consensus 32 ~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~ 108 (216)
.+.+.+++ +.+.+++.++|.|+.+|| ....+.+.+++..++++.|. .+| ...+++++
T Consensus 6 ~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~--------------~vd-----~~~~~~l~ 65 (110)
T 2l6c_A 6 DITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAPQVAIS--------------SVD-----SEARPELM 65 (110)
T ss_dssp BCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCTTSCEE--------------EEE-----GGGCHHHH
T ss_pred ecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCCCcEEE--------------EEc-----CcCCHHHH
Confidence 34456777 566678889999999997 45567888888888777777 344 55678899
Q ss_pred HhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCC
Q psy7942 109 AEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLP 151 (216)
Q Consensus 109 ~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P 151 (216)
++|++.. |++++|+++ +....+.|.. +.+.|.+++....-|
T Consensus 66 ~~~~v~~~Pt~~~~~~G-~~v~~~~G~~-~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 66 KELGFERVPTLVFIRDG-KVAKVFSGIM-NPRELQALYASIHHH 107 (110)
T ss_dssp HHTTCCSSCEEEEEESS-SEEEEEESCC-CHHHHHHHHHTC---
T ss_pred HHcCCcccCEEEEEECC-EEEEEEcCCC-CHHHHHHHHHHHhhh
Confidence 9999986 999999742 3344678988 899999999877543
No 74
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.50 E-value=5.9e-07 Score=67.77 Aligned_cols=97 Identities=16% Similarity=0.290 Sum_probs=77.7
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..++ .++++..+..+++++|.|+.+|| ....+.|.+++..+ +++.|. .|+ ...++
T Consensus 40 v~~l~-~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~--------------~vd-----~~~~~ 99 (148)
T 3p2a_A 40 VINAT-AETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFV--------------KVN-----TEAEP 99 (148)
T ss_dssp CEECC-TTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTTCH
T ss_pred ceecC-HHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEE--------------EEE-----CcCCH
Confidence 45554 47888888889999999999998 45677899999988 678887 455 66788
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++|++.. |++++|+++ +....|.|.. +.+.|.+||...
T Consensus 100 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 141 (148)
T 3p2a_A 100 ALSTRFRIRSIPTIMLYRNG-KMIDMLNGAV-PKAPFDNWLDEQ 141 (148)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEESSCC-CHHHHHHHHHHH
T ss_pred HHHHHCCCCccCEEEEEECC-eEEEEEeCCC-CHHHHHHHHHHH
Confidence 8999999987 999999842 2234588998 999999999864
No 75
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.49 E-value=1.5e-06 Score=63.15 Aligned_cols=96 Identities=22% Similarity=0.296 Sum_probs=73.2
Q ss_pred eeecCHHHHHHh-HhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 31 KEFTSVDEIKAF-IADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 31 ~~l~s~~~~~~~-~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
....+.+++++. ++++++++|.|+.+||. ...+.+.+++.++ +++.|. .++ ...++
T Consensus 15 ~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~--------------~vd-----~d~~~ 75 (119)
T 1w4v_A 15 FNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMA--------------KVD-----IDDHT 75 (119)
T ss_dssp EECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEE--------------EEE-----TTTTH
T ss_pred EEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEE--------------EEe-----CCCCH
Confidence 445567888774 45788999999999984 4566888888887 567777 344 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++++|++.. |++++|+++ +....|.|.. +.+.|.+||..
T Consensus 76 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~ 116 (119)
T 1w4v_A 76 DLAIEYEVSAVPTVLAMKNG-DVVDKFVGIK-DEDQLEAFLKK 116 (119)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHH
T ss_pred HHHHHcCCCcccEEEEEeCC-cEEEEEcCCC-CHHHHHHHHHH
Confidence 8999999986 999999642 2234578988 89999999975
No 76
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.48 E-value=2.1e-06 Score=63.89 Aligned_cols=99 Identities=13% Similarity=0.233 Sum_probs=76.6
Q ss_pred CCceeecCHHHHHHhHhC------------CCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhh
Q psy7942 28 PPAKEFTSVDEIKAFIAD------------SKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIA 91 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~------------~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~ 91 (216)
..+..+ +.++++..+.+ +++++|.|+.+||. ...+.+.+++..+ +.+.|.
T Consensus 22 ~~v~~l-~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~------------- 87 (141)
T 3hxs_A 22 SGTIHL-TRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIY------------- 87 (141)
T ss_dssp -CCEEC-CHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEE-------------
T ss_pred CCcccc-cHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEE-------------
Confidence 345566 46788777664 78999999999984 5567888999888 467777
Q ss_pred hccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 92 SKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 92 ~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.|+ ...+++++++|++.. |++++|.+. +....|.|.. +.+.|.+||...
T Consensus 88 -~v~-----~~~~~~~~~~~~v~~~Pt~~~~~~~-g~~~~~~G~~-~~~~l~~~l~~~ 137 (141)
T 3hxs_A 88 -KVN-----VDKEPELARDFGIQSIPTIWFVPMK-GEPQVNMGAL-SKEQLKGYIDKV 137 (141)
T ss_dssp -EEE-----TTTCHHHHHHTTCCSSSEEEEECSS-SCCEEEESCC-CHHHHHHHHHHT
T ss_pred -EEE-----CCCCHHHHHHcCCCCcCEEEEEeCC-CCEEEEeCCC-CHHHHHHHHHHH
Confidence 344 566788999999986 999999753 3345789998 999999999865
No 77
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.47 E-value=8.2e-07 Score=63.23 Aligned_cols=98 Identities=22% Similarity=0.291 Sum_probs=74.5
Q ss_pred CceeecCHHHHHHhHhC----CCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeee
Q psy7942 29 PAKEFTSVDEIKAFIAD----SKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~----~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.+..+.+.+++++.+.. +++++|.|+.+||. ...+.+.+++..++++.|. .++ .
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~--------------~v~-----~ 65 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFPNVTFL--------------KVD-----V 65 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCSSEEEE--------------EEE-----T
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCCCcEEE--------------EEE-----c
Confidence 46788889999988874 88999999999984 4566788888888777777 344 5
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ .....+.| . +.+.|.+||...
T Consensus 66 ~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g-~-~~~~l~~~l~~~ 110 (113)
T 1ti3_A 66 DELKAVAEEWNVEAMPTFIFLKDG-KLVDKTVG-A-DKDGLPTLVAKH 110 (113)
T ss_dssp TTCHHHHHHHHCSSTTEEEEEETT-EEEEEEEC-C-CTTHHHHHHHHH
T ss_pred cccHHHHHhCCCCcccEEEEEeCC-EEEEEEec-C-CHHHHHHHHHHh
Confidence 56778999999986 999999742 22234567 5 677899988753
No 78
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.46 E-value=5.8e-07 Score=68.19 Aligned_cols=96 Identities=19% Similarity=0.184 Sum_probs=76.5
Q ss_pred eecCHHHHHHhHhCCC-eEEEEEecCCCh-----hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 32 EFTSVDEIKAFIADSK-VVVAGLFKDASS-----ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 32 ~l~s~~~~~~~~~~~~-v~~V~f~~~~~~-----~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
.+++ +++++.+.+.+ +++|-|+++||. ...+.+.++|..+ +.+.|+ +|| ...+
T Consensus 19 ~vt~-~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~--------------KVd-----vDe~ 78 (137)
T 2qsi_A 19 LVDE-ATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAA--------------EVA-----AEAE 78 (137)
T ss_dssp EECT-TTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEE--------------EEC-----GGGH
T ss_pred ccCH-hHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEE--------------EEE-----CCCC
Confidence 5654 78888887666 999999998883 3678999999999 688898 666 6678
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
++++.+|+|.. ||+++||++.. .....|.. ..+.|.+||..+.
T Consensus 79 ~~la~~ygV~siPTlilFkdG~~-v~~~vG~~-~k~~l~~~l~~~l 122 (137)
T 2qsi_A 79 RGLMARFGVAVCPSLAVVQPERT-LGVIAKIQ-DWSSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHTCCSSSEEEEEECCEE-EEEEESCC-CHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEEEECCEE-EEEEeCCC-CHHHHHHHHHHHh
Confidence 89999999986 99999996432 44567887 8889999997653
No 79
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.46 E-value=1.1e-06 Score=67.48 Aligned_cols=97 Identities=12% Similarity=0.203 Sum_probs=76.5
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..+ +.+++++.++++++++|.|+.+|| ....+.|.+++.++ +.+.|. .|| ...++
T Consensus 49 ~~~l-~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~--------------~vd-----~~~~~ 108 (155)
T 2ppt_A 49 VAGI-DPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLA--------------KID-----TQAHP 108 (155)
T ss_dssp EEEC-CHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEE--------------EEE-----TTTST
T ss_pred CccC-CHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEE--------------EEe-----CCccH
Confidence 3455 468888888778899999999998 45677899999888 578887 455 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++|++.. |++++|+++ .....|.|.. +.+.|.+||...
T Consensus 109 ~l~~~~~i~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 150 (155)
T 2ppt_A 109 AVAGRHRIQGIPAFILFHKG-RELARAAGAR-PASELVGFVRGK 150 (155)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHcCCCcCCEEEEEeCC-eEEEEecCCC-CHHHHHHHHHHH
Confidence 8999999986 999999742 2234578988 899999999864
No 80
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=1e-06 Score=64.36 Aligned_cols=103 Identities=13% Similarity=0.253 Sum_probs=77.6
Q ss_pred CceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..++ .++++++++.. ++|.|+.+||. ...+.|.+++..+. .+.|. .+| ...
T Consensus 8 ~v~~l~-~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~--------------~vd-----~~~ 65 (126)
T 1x5e_A 8 NVRVIT-DENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIA--------------KVD-----VTE 65 (126)
T ss_dssp SEEECC-TTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEE--------------EEE-----TTT
T ss_pred ccEEec-HHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEE--------------EEE-----CcC
Confidence 355664 57788877543 78899999984 45678888888773 67777 454 566
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCCCceeee
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSLPLVVEF 156 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~P~v~~~ 156 (216)
+++++++|++.. |++++|++ +....|.|.. +.+.|.+||.....+.+.++
T Consensus 66 ~~~~~~~~~v~~~Pt~~~~~~--G~~~~~~G~~-~~~~l~~~l~~~~~~~~~~~ 116 (126)
T 1x5e_A 66 QPGLSGRFIINALPTIYHCKD--GEFRRYQGPR-TKKDFINFISDKEWKSIEPV 116 (126)
T ss_dssp CHHHHHHTTCCSSSEEEEEET--TEEEECCSCC-CHHHHHHHHHTCGGGGSCEE
T ss_pred CHHHHHHcCCcccCEEEEEeC--CeEEEeecCC-CHHHHHHHHHHHhhccCCCc
Confidence 788999999986 99999974 3356789988 99999999998765555444
No 81
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.44 E-value=1.1e-06 Score=63.67 Aligned_cols=98 Identities=10% Similarity=0.174 Sum_probs=74.7
Q ss_pred CceeecCHHHH-HHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEI-KAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~-~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..++ .+++ +.+++++++++|.|+.+||. ...+.|.+++..+ +++.|+ .+| ...
T Consensus 4 ~v~~l~-~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~ 63 (122)
T 3aps_A 4 ASIDLT-PQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAG--------------KVD-----CQA 63 (122)
T ss_dssp CSEECC-HHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEE--------------EEE-----TTT
T ss_pred chhcCC-HHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEE--------------EEe-----CcC
Confidence 355665 5777 45777889999999999984 5567888888887 478887 455 566
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCC----CCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGP----ASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~----~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|++... ...+.|. . +.+.|.+||...
T Consensus 64 ~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~-~~~~l~~~l~~~ 111 (122)
T 3aps_A 64 YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQINSR-DAKTIAALIYGK 111 (122)
T ss_dssp CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEECCS-CHHHHHHHHHHH
T ss_pred CHHHHHHcCCCccceEEEEeCCCc-cceeeccccCcC-CHHHHHHHHHHH
Confidence 788999999986 99999986433 4456664 6 889999999764
No 82
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.44 E-value=1.6e-06 Score=61.25 Aligned_cols=97 Identities=19% Similarity=0.345 Sum_probs=72.8
Q ss_pred ceeecCHHHHHH-hHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKA-FIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~-~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..++. ++++. .++++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...+
T Consensus 4 v~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~~ 63 (108)
T 2trx_A 4 IIHLTD-DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVA--------------KLN-----IDQN 63 (108)
T ss_dssp EEECCT-TTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEE--------------EEE-----TTTC
T ss_pred ceecch-hhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEE--------------EEE-----CCCC
Confidence 455654 66664 456788999999999984 4567888888888 567777 344 5567
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 64 ~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 106 (108)
T 2trx_A 64 PGTAPKYGIRGIPTLLLFKNG-EVAATKVGAL-SKGQLKEFLDAN 106 (108)
T ss_dssp TTHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHHcCCcccCEEEEEeCC-EEEEEEecCC-CHHHHHHHHHHh
Confidence 78999999986 999999642 2234578988 899999999753
No 83
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.42 E-value=2.9e-06 Score=61.44 Aligned_cols=99 Identities=21% Similarity=0.248 Sum_probs=74.7
Q ss_pred CCceeecCHHHHHHhHh----CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceee
Q psy7942 28 PPAKEFTSVDEIKAFIA----DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~----~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
.++..+.+.++++..+. .+++++|.|+.+||. ...+.|.+++.++.++.|. .++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~--------------~vd----- 72 (122)
T 2vlu_A 12 AEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPNAVFL--------------KVD----- 72 (122)
T ss_dssp CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----
T ss_pred CcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCcEEE--------------EEE-----
Confidence 34456667889988775 478999999999984 4567888889888668887 444
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++|+++ +....+.|.. .+.|.+||...
T Consensus 73 ~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~--~~~l~~~l~~~ 118 (122)
T 2vlu_A 73 VDELKPIAEQFSVEAMPTFLFMKEG-DVKDRVVGAI--KEELTAKVGLH 118 (122)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEETT-EEEEEEESSC--HHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCcccEEEEEeCC-EEEEEEeCcC--HHHHHHHHHHH
Confidence 556788999999986 999999742 2234567765 78899998764
No 84
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.41 E-value=1.2e-05 Score=65.75 Aligned_cols=128 Identities=20% Similarity=0.330 Sum_probs=86.7
Q ss_pred CceeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhCC----CceEEecchhhHHHHhhhhccccceee
Q psy7942 29 PAKEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKVD----DLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~----~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
++..|++ ++++..+ +.+++++|.|+.+||. ...+.|.++|..+. .+.|+ .||
T Consensus 13 ~v~~l~~-~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~--------------~vd----- 72 (244)
T 3q6o_A 13 PLTLLQA-DTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLA--------------ALD----- 72 (244)
T ss_dssp SSEEECT-TTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEE--------------EEE-----
T ss_pred CceeCCh-hhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEE--------------EEe-----
Confidence 4667765 6777655 4569999999999984 55678999998883 57777 344
Q ss_pred e--cccHHHHHhcCCCC-CeEEEEecCCC----CcccccCCCCCHHHHHHHHhhc----C------CCceeeeCcchHHH
Q psy7942 101 T--STNADILAEYSVDD-DTVAIFKKFDE----GRVNYEGPASDEAALRKFLSTQ----S------LPLVVEFNHETAQK 163 (216)
Q Consensus 101 ~--t~~~~v~~~~~v~~-p~i~~~~~~de----~~~~y~G~~~~~~~l~~fi~~~----~------~P~v~~~~~~~~~~ 163 (216)
+ ..+++++++|++.. |++++|++... ....+.| . +.+.|.+||... . .|.+...+.+++..
T Consensus 73 ~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~-~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~ 150 (244)
T 3q6o_A 73 CAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-A-DVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDG 150 (244)
T ss_dssp TTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-C-CHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHT
T ss_pred CCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-C-CHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHH
Confidence 4 34678999999986 99999996432 1224555 5 888888888653 1 23345556677777
Q ss_pred hhccCCcceEEEEEe
Q psy7942 164 IFGGEIKSHLLVFFS 178 (216)
Q Consensus 164 ~~~~~~~~~lllf~~ 178 (216)
++...-...+.+++.
T Consensus 151 ~~~~~~~~~~al~f~ 165 (244)
T 3q6o_A 151 FFARNNEEYLALIFE 165 (244)
T ss_dssp HHHHCCCSEEEEEEE
T ss_pred HhhcCCCceEEEEEE
Confidence 775432334444433
No 85
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.39 E-value=4.6e-06 Score=62.06 Aligned_cols=101 Identities=13% Similarity=0.195 Sum_probs=75.6
Q ss_pred CCCceeecCHHHHHHhHhCCCeEEEEEecCCC--hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 27 GPPAKEFTSVDEIKAFIADSKVVVAGLFKDAS--SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~--~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.|.+..++ .+++++++++..+++|.|+.++. ....+.|.++|+++ +.+.|+ .+| ...
T Consensus 5 ~plv~~~t-~~~f~~~~~~~~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~--------------~vd-----~d~ 64 (133)
T 2djk_A 5 SPLIGEIG-PETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFG--------------TID-----AKA 64 (133)
T ss_dssp CCCSEECC-HHHHHHHHHTTSCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEE--------------EEC-----TTT
T ss_pred cCceeccC-hHHHHHHhcCCCCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEE--------------EEc-----hHH
Confidence 35566664 67888888877788888887732 45678999999999 679998 455 555
Q ss_pred cHHHHHhcCCCC---CeEEEEecCCCCccccc--CCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD---DTVAIFKKFDEGRVNYE--GPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~---p~i~~~~~~de~~~~y~--G~~~~~~~l~~fi~~~ 148 (216)
++.+++.|++.. |++++|+..++....+. |.+ +.+.|.+||...
T Consensus 65 ~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~-~~~~l~~fi~~~ 113 (133)
T 2djk_A 65 FGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEI-TFEAIKAFVDDF 113 (133)
T ss_dssp TGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCC-CHHHHHHHHHHH
T ss_pred hHHHHHHcCCCcccCCEEEEEecCcCcccCCCCcccc-CHHHHHHHHHHH
Confidence 677899999974 99999995223233443 888 899999999864
No 86
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.37 E-value=4.5e-06 Score=62.04 Aligned_cols=98 Identities=16% Similarity=0.270 Sum_probs=75.0
Q ss_pred CceeecCHHHHHHhHh------------CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhh
Q psy7942 29 PAKEFTSVDEIKAFIA------------DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIAS 92 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~------------~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~ 92 (216)
.+..++ .+++.+.+. ++++++|.|+.+||. ...+.|.+++.++ +.+.|.
T Consensus 10 ~v~~l~-~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~-------------- 74 (136)
T 2l5l_A 10 KVIHLT-KAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIY-------------- 74 (136)
T ss_dssp SEEEEC-HHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEE--------------
T ss_pred ceEEec-chHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEE--------------
Confidence 355664 578877664 467899999999984 4567888889888 568887
Q ss_pred ccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 93 KVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 93 ~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.++ ...+++++++|++.. |++++|.+ ++....|.|.. +.+.|.+||...
T Consensus 75 ~vd-----~~~~~~l~~~~~v~~~Pt~~~~~~-~G~~~~~~G~~-~~~~l~~~l~~~ 124 (136)
T 2l5l_A 75 KVD-----TEKEQELAGAFGIRSIPSILFIPM-EGKPEMAQGAM-PKASFKKAIDEF 124 (136)
T ss_dssp EEE-----TTTCHHHHHHTTCCSSCEEEEECS-SSCCEEEESCC-CHHHHHHHHHHH
T ss_pred EEe-----CCCCHHHHHHcCCCCCCEEEEECC-CCcEEEEeCCC-CHHHHHHHHHHH
Confidence 444 556788999999986 99999943 23344788998 999999999875
No 87
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.36 E-value=4.7e-06 Score=58.68 Aligned_cols=97 Identities=21% Similarity=0.285 Sum_probs=72.3
Q ss_pred ceeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..+ +.+++++.+ +++++++|.|+.+||. ...+.+.+++..+ +.+.|. .++ ...+
T Consensus 3 v~~l-~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~~ 62 (107)
T 1dby_A 3 AGAV-NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCV--------------KLN-----TDES 62 (107)
T ss_dssp CEEE-CHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTTC
T ss_pred cEec-cHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEE--------------EEE-----CCCC
Confidence 4455 457777754 5688999999999984 4567888888888 467777 344 5567
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++++++|++.. |++++|+++ .....+.|.. +.+.|.+||...
T Consensus 63 ~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 105 (107)
T 1dby_A 63 PNVASEYGIRSIPTIMVFKGG-KKCETIIGAV-PKATIVQTVEKY 105 (107)
T ss_dssp HHHHHHHTCCSSCEEEEESSS-SEEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHHCCCCcCCEEEEEeCC-EEEEEEeCCC-CHHHHHHHHHHH
Confidence 88999999986 999999642 2234578888 889999998753
No 88
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.35 E-value=3.6e-06 Score=61.19 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=75.8
Q ss_pred CCceeec-CHHHHHH-hHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 28 PPAKEFT-SVDEIKA-FIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 28 ~~v~~l~-s~~~~~~-~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
+.+..++ +.+++++ +.+++++++|.|+.+||. ...+.+.+++..++.+.|. .++ ..
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~--------------~vd-----~~ 63 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFI--------------KVD-----VD 63 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----TT
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCeEEE--------------EEE-----CC
Confidence 4567776 8889984 556788999999999984 4566888888888778887 454 55
Q ss_pred ccHHHHHhcCCCC-CeEEEEecC---CCCcccccCCCCCHHHHHHHHhhcCCC
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKF---DEGRVNYEGPASDEAALRKFLSTQSLP 151 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~---de~~~~y~G~~~~~~~l~~fi~~~~~P 151 (216)
.+++++++|++.. |++++|++. ......+.|.. ...|.+.|..+..|
T Consensus 64 ~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~--~~~l~~~~~~~~~~ 114 (118)
T 2f51_A 64 KNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGAD--VSRIKADIEKFKHH 114 (118)
T ss_dssp TCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCC--HHHHHHHHHHHC--
T ss_pred CCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCC--HHHHHHHHHHhhhc
Confidence 6788999999986 999999851 11123467765 45699999887654
No 89
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.34 E-value=2.2e-06 Score=63.41 Aligned_cols=98 Identities=18% Similarity=0.328 Sum_probs=73.7
Q ss_pred CceeecCHHHHHH-hHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKA-FIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~-~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..++ .+++++ +++.+++++|.|+.+||. ...+.|.+++..+ +++.|. .++ ...
T Consensus 23 ~v~~l~-~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~--------------~vd-----~~~ 82 (128)
T 2o8v_B 23 KIIHLT-DDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVA--------------KLN-----IDQ 82 (128)
T ss_dssp CSEEEC-TTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEE--------------EEE-----TTT
T ss_pred ccEecC-hhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEE--------------EEE-----CCC
Confidence 356665 467764 456789999999999984 4567888999888 467777 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 83 ~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 126 (128)
T 2o8v_B 83 NPGTAPKYGIRGIPTLLLFKNG-EVAATKVGAL-SKGQLKEFLDAN 126 (128)
T ss_dssp CCTTSGGGTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred CHHHHHHcCCCccCEEEEEeCC-EEEEEEcCCC-CHHHHHHHHHHh
Confidence 778899999986 999999642 2234578988 899999999753
No 90
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.33 E-value=4.3e-06 Score=63.63 Aligned_cols=98 Identities=15% Similarity=0.195 Sum_probs=75.9
Q ss_pred ceeecCHHHHHHhH--hCCCeEEEEEecCCCh---hHHHHHHHHHhhCC-CceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 30 AKEFTSVDEIKAFI--ADSKVVVAGLFKDASS---ELAKTFNEIASKVD-DLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 30 v~~l~s~~~~~~~~--~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~-~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+..+.+.++++..+ .++++++|.|+++||. .+.+.+.+++.++. .+.|. .|| ...
T Consensus 5 l~~i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~--------------~vd-----~d~ 65 (149)
T 3gix_A 5 LPKLTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIY--------------LVD-----VDQ 65 (149)
T ss_dssp CCEECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEE--------------EEE-----TTT
T ss_pred eeecCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEE--------------EEE-----CCc
Confidence 34677889999887 4589999999999984 55678889998884 47777 455 567
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCc---------ccccC-CCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGR---------VNYEG-PASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~---------~~y~G-~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++++++.. . ..+.| .. +.+.|.++|...
T Consensus 66 ~~~l~~~~~v~~~Pt~~~~~~G~~-v~~~~g~~~~~~~~G~~~-~~~~l~~~l~~~ 119 (149)
T 3gix_A 66 TAVYTQYFDISYIPSTVFFFNGQH-MKVDYGSPDHTKFVGSFK-TKQDFIDLIEVI 119 (149)
T ss_dssp CCHHHHHTTCCSSSEEEEEETTEE-EEEECSSSCCSCEESCCS-SHHHHHHHHHHH
T ss_pred CHHHHHHcCCCccCeEEEEECCeE-EEeecCCCCCCeEeeecC-CHHHHHHHHHHH
Confidence 788999999986 99999985321 2 35678 55 889999998764
No 91
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.33 E-value=3.4e-06 Score=69.61 Aligned_cols=122 Identities=16% Similarity=0.128 Sum_probs=86.4
Q ss_pred CCcccC-CCCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCC--h----hHHHHHHHHHhhC-CC-
Q psy7942 4 CLPGER-RGGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDAS--S----ELAKTFNEIASKV-DD- 74 (216)
Q Consensus 4 g~~~~Y-~G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~--~----~~~~~f~~~A~~~-~~- 74 (216)
..+..| .|.++.++|.+|+....-|.+.+++. +.+..+ .+.+++++.+..+.+ . .....+.++|+++ +.
T Consensus 89 e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~ 166 (252)
T 2h8l_A 89 DKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE-DNKDLI-QGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAG 166 (252)
T ss_dssp CSEEECCCSSCCHHHHHHHHHHHSSCSSCEECT-TTHHHH-SSSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccCCCCcCHHHHHHHHHhcccCCeeeccc-ccHhhh-cCCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccC
Confidence 356789 99999999999999999999999975 455565 456666555443322 1 3466888899888 44
Q ss_pred --ceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCC--C---CCeEEEEecCCCCcccccCCCCCHHH--HHHHH
Q psy7942 75 --LVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSV--D---DDTVAIFKKFDEGRVNYEGPASDEAA--LRKFL 145 (216)
Q Consensus 75 --~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v--~---~p~i~~~~~~de~~~~y~G~~~~~~~--l~~fi 145 (216)
+.|++ +| ......+++.+|+ + .|+|+++.. +.....+.+++ +.+. |.+|+
T Consensus 167 ~~~~F~~--------------~d-----~~~~~~~~~~fgl~~~~~~~P~v~i~~~-~~~ky~~~~~~-t~~~~~i~~F~ 225 (252)
T 2h8l_A 167 HKLNFAV--------------AS-----RKTFSHELSDFGLESTAGEIPVVAIRTA-KGEKFVMQEEF-SRDGKALERFL 225 (252)
T ss_dssp CCCEEEE--------------EE-----TTTTHHHHGGGTCCCCSCSSCEEEEECT-TSCEEECCSCC-CTTSHHHHHHH
T ss_pred ceEEEEE--------------Ec-----hHHHHHHHHHcCCCCccCCCCEEEEEeC-cCcEecCCccc-CcchHHHHHHH
Confidence 88883 22 2333457788888 3 399999864 33344567788 7777 99999
Q ss_pred hhc
Q psy7942 146 STQ 148 (216)
Q Consensus 146 ~~~ 148 (216)
...
T Consensus 226 ~~~ 228 (252)
T 2h8l_A 226 QDY 228 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 92
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.31 E-value=4.7e-06 Score=58.28 Aligned_cols=95 Identities=18% Similarity=0.302 Sum_probs=70.0
Q ss_pred eeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 31 KEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 31 ~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
..++ .++++..+ +++++++|.|+.+||. ...+.+.+++.++ +.+.|. .++ ...++
T Consensus 3 ~~~~-~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~~~ 62 (105)
T 1fb6_A 3 QDVN-DSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVY--------------KLN-----TDEAP 62 (105)
T ss_dssp EECC-TTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTTCH
T ss_pred eech-hhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEE--------------EEc-----CcchH
Confidence 3444 35666644 4678999999999984 4567888888888 457777 344 55677
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++++|++.. |++++++++ .....+.|.. +.+.|.+||..
T Consensus 63 ~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G~~-~~~~l~~~l~~ 103 (105)
T 1fb6_A 63 GIATQYNIRSIPTVLFFKNG-ERKESIIGAV-PKSTLTDSIEK 103 (105)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEEECC-CHHHHHHHHHH
T ss_pred HHHHhCCCCcccEEEEEeCC-eEEEEEecCC-CHHHHHHHHHh
Confidence 8999999986 999999742 2234577888 88999999875
No 93
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=98.29 E-value=5.1e-06 Score=68.42 Aligned_cols=117 Identities=14% Similarity=0.163 Sum_probs=87.7
Q ss_pred cccCCCCCChHHHHHHHHhhh---CCCceeecCHHHHHHhHh-CCCeEEEEEecCCC---hhHHHHHHHHHhhC-----C
Q psy7942 6 PGERRGGRTAEDIVNWLLKKT---GPPAKEFTSVDEIKAFIA-DSKVVVAGLFKDAS---SELAKTFNEIASKV-----D 73 (216)
Q Consensus 6 ~~~Y~G~Rta~~iv~~l~~~~---~~~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-----~ 73 (216)
...|.|.++...+..|+.... +++. .+ +.+..+.+.+ ..++.++.|+.+|| ....+.+.++|..+ +
T Consensus 96 ~~~~~G~~~~~~l~~fv~~~l~~~~~~~-~l-~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~ 173 (243)
T 2hls_A 96 EVRWTGIPAGEEIRALVEVIMRLSEDES-GL-EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNP 173 (243)
T ss_dssp TEEEESCCCTTHHHHHHHHHHHHHTTCC-CC-CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred ceeEcCCCcHHHHHHHHHHHHhccCCCC-CC-CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCC
Confidence 568999999999999887754 3332 23 4455555543 46788888999997 45677888888876 5
Q ss_pred CceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 74 DLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 74 ~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
++.|. .+| .+.+++++++|++.. |++++ + + ...|.|.. +.+.|.+||....
T Consensus 174 ~v~~~--------------~vd-----~~~~~~~~~~~~V~~vPt~~i--~--G-~~~~~G~~-~~~~l~~~l~~~~ 225 (243)
T 2hls_A 174 VILSE--------------AVE-----AYENPDIADKYGVMSVPSIAI--N--G-YLVFVGVP-YEEDFLDYVKSAA 225 (243)
T ss_dssp CEEEE--------------EEE-----TTTCHHHHHHTTCCSSSEEEE--T--T-EEEEESCC-CHHHHHHHHHHHH
T ss_pred cEEEE--------------EEE-----CccCHHHHHHcCCeeeCeEEE--C--C-EEEEeCCC-CHHHHHHHHHHHh
Confidence 67777 455 667889999999976 99988 2 2 34599998 9999999998764
No 94
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.29 E-value=3.2e-06 Score=61.82 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=69.8
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCChh---HHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccH-
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASSE---LAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNA- 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~---~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~- 105 (216)
.+.|+|.++++++++++++++|.|+..||+. ..+.|.+.+.. +++.|+ .|| ...++
T Consensus 8 ~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~-~~v~~~--------------~vd-----Vde~r~ 67 (112)
T 3iv4_A 8 AIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE-RDMDGY--------------YLI-----VQQERD 67 (112)
T ss_dssp EEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH-HTCCEE--------------EEE-----GGGGHH
T ss_pred eeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc-CCceEE--------------EEE-----eecCch
Confidence 4678999999999999999999999999854 45677777765 677777 343 33343
Q ss_pred ---HHHHhcCCCC--CeEEEEecCCCCcccccCCCCCHHHHHHHH
Q psy7942 106 ---DILAEYSVDD--DTVAIFKKFDEGRVNYEGPASDEAALRKFL 145 (216)
Q Consensus 106 ---~v~~~~~v~~--p~i~~~~~~de~~~~y~G~~~~~~~l~~fi 145 (216)
+++++++|.. |++++|+++..-...-+|.. +.+.|.+.+
T Consensus 68 ~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I-~~~~l~~~~ 111 (112)
T 3iv4_A 68 LSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDI-NVSSLAQAE 111 (112)
T ss_dssp HHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGGGC-SHHHHHHHT
T ss_pred hhHHHHHHhCCccCCCeEEEEECCEEEEEeecccc-CHHHHHHhh
Confidence 3899999993 99999996332222235677 778887654
No 95
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.29 E-value=1.4e-06 Score=64.13 Aligned_cols=108 Identities=19% Similarity=0.343 Sum_probs=68.9
Q ss_pred ceeecCHHHHH-HhHhCCCeEEEEEecCCChhHHHHHHHHHhhCCCceEE---ecchhhHHHHhhhhcccc-ceee---e
Q psy7942 30 AKEFTSVDEIK-AFIADSKVVVAGLFKDASSELAKTFNEIASKVDDLVFD---ASSELAKTFNEIASKVDD-LVFV---T 101 (216)
Q Consensus 30 v~~l~s~~~~~-~~~~~~~v~~V~f~~~~~~~~~~~f~~~A~~~~~~~F~---~~~~~~~~~~~~~~~~~~-~~~~---~ 101 (216)
+..++. ++++ .+++++++++|.|+.+||.... ++++-.|. .|+...+.|++++....+ ..++ .
T Consensus 5 v~~l~~-~~f~~~~~~~~k~vlv~F~a~wC~~c~--------~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~ 75 (123)
T 1oaz_A 5 IIHLTD-DSFDTDVLKADGAILVDFWAEWCGPIE--------ESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNI 75 (123)
T ss_dssp CEECCS-TTHHHHTTSCSSEEEEEEECSSCSCBS--------SSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEET
T ss_pred cEecCh-hhHHHHHHhCCCeEEEEEECCCCcccc--------ccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 556654 6666 4567789999999999986111 12233444 566666666665555532 2221 4
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
..+++++++|++.. |++++|+++ +....+.|.. +.+.|.+||...
T Consensus 76 d~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 121 (123)
T 1oaz_A 76 DQNPGTAPKYGIRGIPTLLLFKNG-EVAATKVGAL-SKGQLKEFLDAN 121 (123)
T ss_dssp TSCTTTGGGGTCCBSSEEEEEESS-SEEEEEESCC-CHHHHHHHHTTT
T ss_pred CCCHHHHHHcCCCccCEEEEEECC-EEEEEEeCCC-CHHHHHHHHHHH
Confidence 45678899999986 999999642 2234588988 899999999864
No 96
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.27 E-value=7.5e-06 Score=60.73 Aligned_cols=99 Identities=16% Similarity=0.237 Sum_probs=75.5
Q ss_pred CCceeecCHHHHHHhHh----CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceee
Q psy7942 28 PPAKEFTSVDEIKAFIA----DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~----~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
..+..+.+.+++++.+. .+++++|.|+.+||. ...+.+.+++..+.++.|. .++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~--------------~v~----- 84 (139)
T 3d22_A 24 GNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFL--------------VID----- 84 (139)
T ss_dssp TTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----
T ss_pred CcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEE--------------EEe-----
Confidence 45678888899988774 478899999999984 4567888888888778887 344
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++.. |++++++++ .....+.|. +.+.|.+||...
T Consensus 85 ~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~l~~~ 130 (139)
T 3d22_A 85 VDELSDFSASWEIKATPTFFFLRDG-QQVDKLVGA--NKPELHKKITAI 130 (139)
T ss_dssp TTTSHHHHHHTTCCEESEEEEEETT-EEEEEEESC--CHHHHHHHHHHH
T ss_pred CcccHHHHHHcCCCcccEEEEEcCC-eEEEEEeCC--CHHHHHHHHHHH
Confidence 556788999999986 999999742 223345665 578899999765
No 97
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.27 E-value=2.3e-05 Score=71.56 Aligned_cols=143 Identities=21% Similarity=0.294 Sum_probs=96.6
Q ss_pred CceeecCHHHHHHhH-hCCCeEEEEEecCCCh---hHHHHHHHHHhhC-C---CceEEecchhhHHHHhhhhccccceee
Q psy7942 29 PAKEFTSVDEIKAFI-ADSKVVVAGLFKDASS---ELAKTFNEIASKV-D---DLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~---~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
.+..++. ++++..+ +++++++|.|+++||. ...+.|.++|..+ + .+.|+ .||
T Consensus 13 ~V~~Lt~-~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~--------------~VD----- 72 (519)
T 3t58_A 13 PLTLLDA-DSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLA--------------VLD----- 72 (519)
T ss_dssp SSEEECT-TTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEE--------------EEE-----
T ss_pred CcEECCh-HHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEE--------------EEE-----
Confidence 4566654 6777755 5679999999999984 5677899999887 3 57777 444
Q ss_pred ec--ccHHHHHhcCCCC-CeEEEEecCCC---CcccccCCCCCHHHHHHHHhhc----C------CCceeeeCcchHHHh
Q psy7942 101 TS--TNADILAEYSVDD-DTVAIFKKFDE---GRVNYEGPASDEAALRKFLSTQ----S------LPLVVEFNHETAQKI 164 (216)
Q Consensus 101 ~t--~~~~v~~~~~v~~-p~i~~~~~~de---~~~~y~G~~~~~~~l~~fi~~~----~------~P~v~~~~~~~~~~~ 164 (216)
++ .+++++++|+|.. |++++|+++.. ....+.|.. +.+.|.+||... . .|.+..++.+++..+
T Consensus 73 ~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~-~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~l~~~ 151 (519)
T 3t58_A 73 CAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGA-NVQTLRMRLIDALESHRDTWPPACPPLEPAKLNDIDGF 151 (519)
T ss_dssp TTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSC-CHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHHHTTG
T ss_pred CCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCC-CHHHHHHHHHHHHhhccccCCCCCCccCcCCHHHHHHH
Confidence 43 3678999999987 99999996322 234566777 888888888653 1 234566677777777
Q ss_pred hccCCcceEEE-EEeCCccchhhhhHHHHHHHHhcc
Q psy7942 165 FGGEIKSHLLV-FFSKAAGHYESHFEPVQTVAKDFR 199 (216)
Q Consensus 165 ~~~~~~~~lll-f~~~~~~~~~~~~~~l~~vA~~~r 199 (216)
+.......+++ |.+.+. ...+.++.++.
T Consensus 152 l~~~~~~~vallF~~~~s-------~~~~~~~ldl~ 180 (519)
T 3t58_A 152 FTRNKADYLALVFEREDS-------YLGREVTLDLS 180 (519)
T ss_dssp GGSCCCSEEEEEEECTTC-------CHHHHHHHHTT
T ss_pred hccCCCCeEEEEecCCch-------HHHHHHHHHhh
Confidence 76543334444 443321 14455666665
No 98
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.27 E-value=3.4e-06 Score=70.32 Aligned_cols=101 Identities=17% Similarity=0.310 Sum_probs=80.1
Q ss_pred CCCceeecCHHHHHHhHhC--CCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceee
Q psy7942 27 GPPAKEFTSVDEIKAFIAD--SKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~--~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
.+.|..++. ++++++++. +++++|.|+.+|| ....+.|.+++..+ +.+.|. .||
T Consensus 6 ~~~v~~~~~-~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~--------------~vd----- 65 (287)
T 3qou_A 6 VENIVNINE-SNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILA--------------KLD----- 65 (287)
T ss_dssp CTTEEECCT-TTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEE--------------EEE-----
T ss_pred CCccEECCH-HHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEE--------------EEe-----
Confidence 345667764 788888864 7899999999997 45678899999888 458887 565
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
+..+++++++|+|.+ |++++|+++ .....|.|.. +.+.+..|+....
T Consensus 66 ~~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~-~~~~l~~~l~~~l 113 (287)
T 3qou_A 66 CDAEQMIAAQFGLRAIPTVYLFQNG-QPVDGFQGPQ-PEEAIRALLDXVL 113 (287)
T ss_dssp TTTCHHHHHTTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHHS
T ss_pred CccCHHHHHHcCCCCCCeEEEEECC-EEEEEeeCCC-CHHHHHHHHHHHc
Confidence 677889999999987 999999742 2234588988 8999999998875
No 99
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.25 E-value=1.4e-05 Score=59.24 Aligned_cols=102 Identities=17% Similarity=0.247 Sum_probs=74.1
Q ss_pred CCCceeecCHHHHHHhHhC--CCeEEEEEecCCChhH---HHHH---HHHHhhCCCceEEecchhhHHHHhhhhccccce
Q psy7942 27 GPPAKEFTSVDEIKAFIAD--SKVVVAGLFKDASSEL---AKTF---NEIASKVDDLVFDASSELAKTFNEIASKVDDLV 98 (216)
Q Consensus 27 ~~~v~~l~s~~~~~~~~~~--~~v~~V~f~~~~~~~~---~~~f---~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~ 98 (216)
.|....+.+.++++..+++ +++++|.|+.+||... .+.+ .+++..+.++.|. .|+
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~--------------~vd--- 72 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLL--------------QAN--- 72 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEE--------------EEE---
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEE--------------EEe---
Confidence 4556678888888887764 7899999999998544 3344 6777777667776 333
Q ss_pred eee----cccHHHHHhcCCCC-CeEEEEecCCCCc--ccccCCCCCHHHHHHHHhhc
Q psy7942 99 FVT----STNADILAEYSVDD-DTVAIFKKFDEGR--VNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 99 ~~~----t~~~~v~~~~~v~~-p~i~~~~~~de~~--~~y~G~~~~~~~l~~fi~~~ 148 (216)
. ..+.+++++|++.. |++++|.+..... ..+.|.. +.+.|.+++...
T Consensus 73 --~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~-~~~~l~~~l~~~ 126 (134)
T 2fwh_A 73 --VTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFM-DAETFSAHLRDR 126 (134)
T ss_dssp --CTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCC-CHHHHHHHHHHC
T ss_pred --CCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeecc-CHHHHHHHHHhc
Confidence 3 33567899999986 9999994322222 4688998 999999999764
No 100
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.25 E-value=1.4e-06 Score=64.09 Aligned_cols=90 Identities=14% Similarity=0.198 Sum_probs=69.5
Q ss_pred HHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCC
Q psy7942 38 EIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSV 113 (216)
Q Consensus 38 ~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v 113 (216)
.++....++++++|.|+.+||. ...+.+.+++.++ +++.|. .|+ ...+++++++|++
T Consensus 34 ~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~--------------~vd-----~d~~~~l~~~~~v 94 (128)
T 3ul3_B 34 IINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLL--------------KVD-----LDKNESLARKFSV 94 (128)
T ss_dssp SSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEE--------------EEE-----GGGCHHHHHHTTC
T ss_pred HHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEE--------------EEE-----CCCCHHHHHHcCC
Confidence 3445566789999999999984 4566888888887 567776 455 6677889999999
Q ss_pred CC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 114 DD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 114 ~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.. |++++|++ .+....+.|.. +.+.|.+||.++
T Consensus 95 ~~~Pt~~~~~~-G~~~~~~~G~~-~~~~l~~~l~~~ 128 (128)
T 3ul3_B 95 KSLPTIILLKN-KTMLARKDHFV-SSNDLIALIKKH 128 (128)
T ss_dssp CSSSEEEEEET-TEEEEEESSCC-CHHHHHHHHTTC
T ss_pred CCcCEEEEEEC-CEEEEEecCCC-CHHHHHHHHHhC
Confidence 87 99999974 22344578888 999999999764
No 101
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.24 E-value=6.3e-06 Score=61.38 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=64.0
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..++ .++++..+..++.++|.|+.+|| ....+.|.+++..+ +++.|. .++ ...++
T Consensus 35 v~~l~-~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~--------------~vd-----~~~~~ 94 (140)
T 1v98_A 35 VVEAD-EKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVV--------------KVN-----VDEHP 94 (140)
T ss_dssp ---------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEE--------------EEE-----TTTCH
T ss_pred cccCC-HHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEE--------------EEE-----CCCCH
Confidence 44554 56777776555558899999997 45567888899888 478887 444 55678
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++|++.. |++++|+++ +....|.|.. +.+.|.+||...
T Consensus 95 ~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~i~~~ 136 (140)
T 1v98_A 95 GLAARYGVRSVPTLVLFRRG-APVATWVGAS-PRRVLEERLRPY 136 (140)
T ss_dssp HHHHHTTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHCCCCccCEEEEEeCC-cEEEEEeCCC-CHHHHHHHHHHH
Confidence 8999999986 999999742 2234578988 899999999764
No 102
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.21 E-value=1.4e-05 Score=57.57 Aligned_cols=99 Identities=7% Similarity=0.103 Sum_probs=69.7
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
+..+ +.++++..+++++.++|.|+.+||. ...+.+.+++..+ ..+.|. .++...- ....+
T Consensus 14 ~~~~-~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~--------------~~~~~~~-~~~~~ 77 (118)
T 1zma_A 14 LEVT-TVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFI--------------NSEEPSQ-LNDLQ 77 (118)
T ss_dssp SEEC-CHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEE--------------ETTCGGG-HHHHH
T ss_pred hhcC-CHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEE--------------ECCCcCc-HHHHH
Confidence 3444 5788998888889999999999984 4566788888776 345554 1210000 11234
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHh
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLS 146 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~ 146 (216)
+++++|++.. |++++|+++ +....+.|.. +.+.|.+||.
T Consensus 78 ~~~~~~~i~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~ 117 (118)
T 1zma_A 78 AFRSRYGIPTVPGFVHITDG-QINVRCDSSM-SAQEIKDFAG 117 (118)
T ss_dssp HHHHHHTCCSSCEEEEEETT-EEEEECCTTC-CHHHHHHHHT
T ss_pred HHHHHcCCCCCCeEEEEECC-EEEEEecCCC-CHHHHHHHhh
Confidence 6788999986 999999853 2245678988 8999999986
No 103
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.19 E-value=6.8e-06 Score=66.43 Aligned_cols=98 Identities=17% Similarity=0.320 Sum_probs=76.1
Q ss_pred ceeecCHHHHHH-hHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeeccc
Q psy7942 30 AKEFTSVDEIKA-FIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTN 104 (216)
Q Consensus 30 v~~l~s~~~~~~-~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~ 104 (216)
+..+ +.++++. +++++++++|.|+.+||. ...+.+.+++.++ +.+.|. .|+ ...+
T Consensus 14 ~~~l-t~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~--------------~vd-----~d~~ 73 (222)
T 3dxb_A 14 IIHL-TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVA--------------KLN-----IDQN 73 (222)
T ss_dssp CEEC-CTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEE--------------EEE-----TTTC
T ss_pred ceeC-CHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEE--------------EEE-----CCCC
Confidence 3445 4577876 577899999999999984 5567889999988 457777 454 5667
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
++++++|++.. |++++|+++ .....|.|.. +.+.|.+||....
T Consensus 74 ~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~l 117 (222)
T 3dxb_A 74 PGTAPKYGIRGIPTLLLFKNG-EVAATKVGAL-SKGQLKEFLDANL 117 (222)
T ss_dssp TTTGGGGTCCSBSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHHS
T ss_pred HHHHHHcCCCcCCEEEEEECC-eEEEEecccc-ChHHHHHHHHhhc
Confidence 78999999987 999999842 2234688998 9999999998753
No 104
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.19 E-value=2.9e-06 Score=68.93 Aligned_cols=99 Identities=19% Similarity=0.250 Sum_probs=74.5
Q ss_pred ceeecCHHHHHHhHhCC---CeEEEEEecCCC---hhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 30 AKEFTSVDEIKAFIADS---KVVVAGLFKDAS---SELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~---~v~~V~f~~~~~---~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+..|.+.+++...+.+. ++++|.||.+|| ..+.+.|.++|.++.++.|. .|+ ++
T Consensus 101 v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~~v~f~--------------~vd-----~~- 160 (217)
T 2trc_P 101 VYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYPMVKFC--------------KIR-----AS- 160 (217)
T ss_dssp EEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCTTSEEE--------------EEE-----HH-
T ss_pred EEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCCCeEEE--------------EEE-----CC-
Confidence 56777889998888643 789999999997 45677899999998888888 454 44
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCC------CCHHHHHHHHhhcC
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPA------SDEAALRKFLSTQS 149 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~------~~~~~l~~fi~~~~ 149 (216)
++.++.+|++.. |++++|+++. ....|.|.. .+.+.|..||..+.
T Consensus 161 ~~~l~~~~~i~~~PTl~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 161 NTGAGDRFSSDVLPTLLVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp HHTCSTTSCGGGCSEEEEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred cHHHHHHCCCCCCCEEEEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 667888999975 9999998532 233455543 14589999998764
No 105
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.17 E-value=5.7e-06 Score=59.66 Aligned_cols=97 Identities=21% Similarity=0.399 Sum_probs=70.4
Q ss_pred CceeecCHHHHHHhH-hCCCeEEEEEecCCC---hhHHHHHHHHHhhC-C-----CceEEecchhhHHHHhhhhccccce
Q psy7942 29 PAKEFTSVDEIKAFI-ADSKVVVAGLFKDAS---SELAKTFNEIASKV-D-----DLVFDASSELAKTFNEIASKVDDLV 98 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~-~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~-----~~~F~~~~~~~~~~~~~~~~~~~~~ 98 (216)
.+..|+. ++++..+ ..+++++|.|+.+|| ....+.|.+++..+ + .+.|+ .+|
T Consensus 8 ~v~~l~~-~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~--------------~vd--- 69 (121)
T 2djj_A 8 PVTVVVA-KNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIA--------------KVD--- 69 (121)
T ss_dssp SSEECCT-TTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEE--------------EEE---
T ss_pred CeEEecc-cCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEE--------------EEE---
Confidence 4566654 6777765 578899999999998 45577888999887 3 57777 343
Q ss_pred eeecccHHHHHhcCCCC-CeEEEEecCCCC-cccccCCCCCHHHHHHHHhhcC
Q psy7942 99 FVTSTNADILAEYSVDD-DTVAIFKKFDEG-RVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 99 ~~~t~~~~v~~~~~v~~-p~i~~~~~~de~-~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
...++ +++ ++.. |++++|++.... ...|.|.. +.+.|.+||..+.
T Consensus 70 --~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~-~~~~l~~~i~~~~ 116 (121)
T 2djj_A 70 --ATAND-VPD--EIQGFPTIKLYPAGAKGQPVTYSGSR-TVEDLIKFIAENG 116 (121)
T ss_dssp --TTTSC-CSS--CCSSSSEEEEECSSCTTSCCCCCCCS-CHHHHHHHHHHTS
T ss_pred --Ccccc-ccc--ccCcCCeEEEEeCcCCCCceEecCCC-CHHHHHHHHHhcc
Confidence 33332 444 7775 999999974332 56789998 9999999998764
No 106
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.16 E-value=9.6e-06 Score=61.18 Aligned_cols=100 Identities=20% Similarity=0.198 Sum_probs=72.0
Q ss_pred ceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 30 AKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 30 v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+..+.+.++++..+. ++++++|.|+.+||. ...+.+.+++..+ +.+.|. .|| ...
T Consensus 5 l~~i~~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~--------------~vd-----~d~ 65 (142)
T 1qgv_A 5 LPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIY--------------LVD-----ITE 65 (142)
T ss_dssp SCBCCSHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEE--------------EEE-----TTT
T ss_pred HhccCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEE--------------EEc-----ccc
Confidence 456778899987554 588999999999984 5567888888888 667777 454 556
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcc--------cccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRV--------NYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~--------~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+++..-.. ...|...+.+.|.++|...
T Consensus 66 ~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 66 VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp CCTTTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 778899999986 99999985322111 2445552478888888653
No 107
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.15 E-value=2e-05 Score=55.95 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=71.3
Q ss_pred CceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec-
Q psy7942 29 PAKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS- 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t- 102 (216)
.+..+++ +++++.+. .+++++|.|+.+||. ...+.+.+++..+.++.|. .+| ..
T Consensus 6 ~v~~l~~-~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~v~~~--------------~vd-----~~~ 65 (111)
T 2pu9_C 6 KVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLDVIFL--------------KLD-----CNQ 65 (111)
T ss_dssp SEEEECT-TTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----CSS
T ss_pred ccEEech-HHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCCeEEE--------------EEe-----cCc
Confidence 4566764 77888776 478999999999984 4567888888888778887 344 44
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
.+++++++|++.. |++++++++. ....+.|. ..+.|.+||..
T Consensus 66 ~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~~G~--~~~~l~~~l~~ 108 (111)
T 2pu9_C 66 ENKTLAKELGIRVVPTFKILKENS-VVGEVTGA--KYDKLLEAIQA 108 (111)
T ss_dssp TTHHHHHHHCCSBSSEEEEESSSS-EEEEEESS--CHHHHHHHHHH
T ss_pred chHHHHHHcCCCeeeEEEEEeCCc-EEEEEcCC--CHHHHHHHHHH
Confidence 4678999999986 9999887532 23346675 47889999875
No 108
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.12 E-value=1.2e-05 Score=59.13 Aligned_cols=95 Identities=15% Similarity=0.199 Sum_probs=66.8
Q ss_pred ceeecCHHHHHHhHh-CCC--eEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 30 AKEFTSVDEIKAFIA-DSK--VVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 30 v~~l~s~~~~~~~~~-~~~--v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
+..++ .+++.+.+. +.+ .++|.|+++||. .+.+.+.++|.+++++.|. +|| .
T Consensus 5 v~~it-~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~--------------kvd-----~-- 62 (118)
T 3evi_A 5 LREIS-GNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFV--------------KAI-----V-- 62 (118)
T ss_dssp CEECC-GGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----G--
T ss_pred eEEeC-HHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEE--------------EEE-----h--
Confidence 45674 466666544 444 899999999984 5577899999999889998 343 2
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccC-------CCCCHHHHHHHHhhcC
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEG-------PASDEAALRKFLSTQS 149 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G-------~~~~~~~l~~fi~~~~ 149 (216)
+ +.+++|++.. |++++|+++.. ...+.| .+ +.+.|+.|+....
T Consensus 63 d-~~~~~~~v~~~PT~~~fk~G~~-v~~~~G~~~~gg~~~-~~~~le~~L~~~g 113 (118)
T 3evi_A 63 N-SCIQHYHDNCLPTIFVYKNGQI-EAKFIGIIECGGINL-KLEELEWKLAEVG 113 (118)
T ss_dssp G-GTSTTCCGGGCSEEEEEETTEE-EEEEESTTTTTCSSC-CHHHHHHHHHTTT
T ss_pred H-HhHHHCCCCCCCEEEEEECCEE-EEEEeChhhhCCCCC-CHHHHHHHHHHcC
Confidence 2 2357899875 99999996432 222332 35 8999999998753
No 109
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.11 E-value=2.3e-06 Score=62.45 Aligned_cols=100 Identities=23% Similarity=0.250 Sum_probs=74.8
Q ss_pred CCceeecCHHHHHHhHhC----CCeEEEEEecCCC---hhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceee
Q psy7942 28 PPAKEFTSVDEIKAFIAD----SKVVVAGLFKDAS---SELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFV 100 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~~----~~v~~V~f~~~~~---~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~ 100 (216)
..+..+++.+++++.+.. +++++|.|+.+|| ....+.+.+++..+.++.|. .++
T Consensus 14 ~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~v~~~--------------~v~----- 74 (130)
T 1wmj_A 14 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFL--------------KVD----- 74 (130)
T ss_dssp SSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCTTBCCE--------------ECC-----
T ss_pred cceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCCEEE--------------EEe-----
Confidence 346778788888887764 7889999999986 45677888889888777777 344
Q ss_pred ecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 101 TSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
...+++++++|++.. |++++|+++ .....+.| . +.+.|.+||....
T Consensus 75 ~~~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g-~-~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 75 VDELKEVAEKYNVEAMPTFLFIKDG-AEADKVVG-A-RKDDLQNTIVKHV 121 (130)
T ss_dssp TTTSGGGHHHHTCCSSCCCCBCTTT-TCCBCCCT-T-CTTTHHHHHHHHT
T ss_pred ccchHHHHHHcCCCccceEEEEeCC-eEEEEEeC-C-CHHHHHHHHHHHH
Confidence 556778999999986 999999643 22345667 5 6678888887653
No 110
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.11 E-value=3.2e-06 Score=62.15 Aligned_cols=102 Identities=23% Similarity=0.373 Sum_probs=74.2
Q ss_pred CceeecCHHHHHHhHh-CCCeEEEEEecCCCh---hHHHHHHHHHhhC---CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 29 PAKEFTSVDEIKAFIA-DSKVVVAGLFKDASS---ELAKTFNEIASKV---DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~---~~~~~f~~~A~~~---~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.+..|+. ++++..+. .+++++|.|+.+||. ...+.|.+++..+ .++.|+ .+| .
T Consensus 8 ~v~~l~~-~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~--------------~vd-----~ 67 (133)
T 2dj3_A 8 PVKVVVG-KTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIA--------------KMD-----A 67 (133)
T ss_dssp SSEECCT-TTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEE--------------EEC-----T
T ss_pred ceEEEcC-CCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEE--------------Eec-----C
Confidence 4556654 66766665 488999999999984 5567888888887 357777 455 5
Q ss_pred cccHHHHHhcCCCC-CeEEEEecCCC-Cccccc-CCCCCHHHHHHHHhhcCCC
Q psy7942 102 STNADILAEYSVDD-DTVAIFKKFDE-GRVNYE-GPASDEAALRKFLSTQSLP 151 (216)
Q Consensus 102 t~~~~v~~~~~v~~-p~i~~~~~~de-~~~~y~-G~~~~~~~l~~fi~~~~~P 151 (216)
..++.++++|++.. |++++|++... ....|. |.. +.+.|.+||....-.
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~-~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 68 TANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNR-DLEHLSKFIDEHATK 119 (133)
T ss_dssp TTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCC-STTHHHHHHHHHSSS
T ss_pred CcCHHHHhhcCCCcCCEEEEEeCCCcccceEecCCCc-CHHHHHHHHHHhccc
Confidence 55666778899986 99999986433 234577 557 889999999887543
No 111
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.10 E-value=1.7e-05 Score=58.86 Aligned_cols=95 Identities=8% Similarity=0.012 Sum_probs=73.0
Q ss_pred ceeecCHHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeee-----
Q psy7942 30 AKEFTSVDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVT----- 101 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~----- 101 (216)
+..+ +.+++++.+++ +++|.|+.+||. ...+.+.+++.+++ +.|. .|+ .
T Consensus 18 v~~l-~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~-v~~~--------------~vd-----~~~~~~ 74 (135)
T 3emx_A 18 LIYI-TPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD-VPIV--------------MFI-----WGSLIG 74 (135)
T ss_dssp EEEC-CHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC-SCEE--------------EEE-----ECTTCC
T ss_pred eeec-CHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC-CEEE--------------EEE-----CCCchh
Confidence 4455 67899999877 889999999984 45668888888876 6666 333 4
Q ss_pred ----cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 102 ----STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 102 ----t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
..+++++++|++.. |++++|+++ +....+.|.. +.+.+..||+...
T Consensus 75 ~~~~d~~~~l~~~~~v~~~Pt~~~~~~G-~~v~~~~G~~-~~~~~~~~i~~~~ 125 (135)
T 3emx_A 75 ERELSAARLEMNKAGVEGTPTLVFYKEG-RIVDKLVGAT-PWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHHHHHHHTCCSSSEEEEEETT-EEEEEEESCC-CHHHHHHHHHHHC
T ss_pred hhhhhhhHHHHHHcCCceeCeEEEEcCC-EEEEEEeCCC-CHHHHHHHHHHHh
Confidence 45678899999986 999999942 2345678988 8999999998765
No 112
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=1.6e-06 Score=64.56 Aligned_cols=97 Identities=19% Similarity=0.274 Sum_probs=71.2
Q ss_pred ceeecCHHHHHHhHhCCC--eEEEEEecCCC---hhHHHHHHHHHhhC--CCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 30 AKEFTSVDEIKAFIADSK--VVVAGLFKDAS---SELAKTFNEIASKV--DDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~~--v~~V~f~~~~~---~~~~~~f~~~A~~~--~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
+..++ .+++++.+..++ +++|.|+.+|| ....+.|.+++.++ +++.|+ .+| ..
T Consensus 9 v~~l~-~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~--------------~vd-----~~ 68 (137)
T 2dj0_A 9 IKYFN-DKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFG--------------KVD-----VG 68 (137)
T ss_dssp CEECC-TTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEE--------------ECC-----TT
T ss_pred EEEcc-HhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEE--------------EEe-----Cc
Confidence 55565 578888776544 88999999997 45678899999888 368888 565 66
Q ss_pred ccHHHHHhcCCC------C-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 103 TNADILAEYSVD------D-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 103 ~~~~v~~~~~v~------~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+++++++|++. . |++++|++. +....+.|.. +.+.|.+|+...
T Consensus 69 ~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G-~~~~~~~G~~-~~~~l~~~l~~~ 119 (137)
T 2dj0_A 69 RYTDVSTRYKVSTSPLTKQLPTLILFQGG-KEAMRRPQID-KKGRAVSWTFSE 119 (137)
T ss_dssp TCHHHHHHTTCCCCSSSSCSSEEEEESSS-SEEEEESCBC-SSSCBCCCCCCH
T ss_pred cCHHHHHHccCcccCCcCCCCEEEEEECC-EEEEEecCcC-chHHHHHHHhcc
Confidence 788899999996 5 999999742 2234577876 666666666543
No 113
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.06 E-value=2.1e-05 Score=57.46 Aligned_cols=95 Identities=14% Similarity=0.150 Sum_probs=70.7
Q ss_pred eeecCHHHHHHhHhC--CCeEEEEEecC-------CCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccc
Q psy7942 31 KEFTSVDEIKAFIAD--SKVVVAGLFKD-------ASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDL 97 (216)
Q Consensus 31 ~~l~s~~~~~~~~~~--~~v~~V~f~~~-------~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~ 97 (216)
..+.+.+++++.+.+ +++++|.|+.+ ||. ...+.+.+++..+ +++.|. .++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~--------------~vd-- 70 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFI--------------YCQ-- 70 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEE--------------EEE--
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEE--------------EEE--
Confidence 456788999988876 89999999999 984 5567888888888 577777 333
Q ss_pred eeee-------cccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 98 VFVT-------STNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 98 ~~~~-------t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
. ..++.++++|++.. |++++|++ .....-+.| . +.+.|.+||.+
T Consensus 71 ---~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~-~~~~~g~~~-~-~~~~l~~~i~~ 122 (123)
T 1wou_A 71 ---VGEKPYWKDPNNDFRKNLKVTAVPTLLKYGT-PQKLVESEC-L-QANLVEMLFSE 122 (123)
T ss_dssp ---CCCHHHHHCTTCHHHHHHCCCSSSEEEETTS-SCEEEGGGG-G-CHHHHHHHHHC
T ss_pred ---CCCchhhhchhHHHHHHCCCCeeCEEEEEcC-CceEecccc-C-CHHHHHHHHhc
Confidence 3 35667889999986 99999986 222223343 4 67889999864
No 114
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.05 E-value=6.9e-05 Score=61.64 Aligned_cols=122 Identities=18% Similarity=0.185 Sum_probs=82.6
Q ss_pred CcccCC--CCCChHHHHHHHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCC---h----hHHHHHHHHHhhCCCc
Q psy7942 5 LPGERR--GGRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDAS---S----ELAKTFNEIASKVDDL 75 (216)
Q Consensus 5 ~~~~Y~--G~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~---~----~~~~~f~~~A~~~~~~ 75 (216)
....|+ |++++++|.+|+....-|.+.+++. +++..+.....++++.++.+.. . .....|.++|+++..+
T Consensus 91 ~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~-~n~~~~~~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~kki 169 (250)
T 3ec3_A 91 RMHVMDVQGSTEASAIKDYVVKHALPLVGHRKT-SNDAKRYSKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFPEY 169 (250)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHSSCTEEEECT-TTHHHHSCSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCTTS
T ss_pred cceeccCCCCCCHHHHHHHHHHcCCCceeecCc-cchhhhhccCccEEEEEecccccccchhHHHHHHHHHHHHHhhcce
Confidence 456788 5899999999999999999999985 4555544555555555543422 1 2467889999988777
Q ss_pred eEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC----CeEEEEecCCCCccccc-CCCCCHHHHHHHHhhc
Q psy7942 76 VFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD----DTVAIFKKFDEGRVNYE-GPASDEAALRKFLSTQ 148 (216)
Q Consensus 76 ~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~----p~i~~~~~~de~~~~y~-G~~~~~~~l~~fi~~~ 148 (216)
.|++ +| .......++.+|++. |.++++.. +.....+. +.+ +.+.|.+|+...
T Consensus 170 ~F~~--------------~d-----~~~~~~~l~~fgl~~~~~~p~~~~~~~-~~~ky~~~~~~~-t~~~i~~Fv~~~ 226 (250)
T 3ec3_A 170 TFAI--------------AD-----EEDYATEVKDLGLSESGGDVNAAILDE-SGKKFAMEPEEF-DSDALREFVMAF 226 (250)
T ss_dssp EEEE--------------EE-----TTTTHHHHHHTTCSSCSCSCEEEEECT-TSCEEECCCCSC-CHHHHHHHHHHH
T ss_pred eEEE--------------Ec-----HHHHHHHHHHcCCCccCCCcEEEEEcC-CCceecCCcccC-CHHHHHHHHHHH
Confidence 8883 22 222344677788752 46666542 33344455 678 999999999764
No 115
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.04 E-value=4.9e-05 Score=55.01 Aligned_cols=98 Identities=19% Similarity=0.262 Sum_probs=71.5
Q ss_pred CCceeecCHHHHHHhHh--CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 28 PPAKEFTSVDEIKAFIA--DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 28 ~~v~~l~s~~~~~~~~~--~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
..+..+++ +++++.+. .+++++|.|+.+||. ...+.+.+++.++.++.|. .+| ..
T Consensus 18 ~~v~~l~~-~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~--------------~vd-----~~ 77 (124)
T 1faa_A 18 GKVTEVNK-DTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLDVIFL--------------KLD-----CN 77 (124)
T ss_dssp TSEEEECT-TTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEE--------------EEE-----CS
T ss_pred CceEEecc-hhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCCCEEE--------------EEe-----cC
Confidence 34566754 67777766 578899999999984 4567888888888778777 344 43
Q ss_pred -ccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 103 -TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 103 -~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+++++++|++.. |++++++++ +....+.|. ..+.|.+||...
T Consensus 78 ~~~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~--~~~~l~~~i~~~ 122 (124)
T 1faa_A 78 QENKTLAKELGIRVVPTFKILKEN-SVVGEVTGA--KYDKLLEAIQAA 122 (124)
T ss_dssp STTHHHHHHHCCSSSSEEEEEETT-EEEEEEESS--CHHHHHHHHHHH
T ss_pred cchHHHHHHcCCCeeeEEEEEeCC-cEEEEEcCC--CHHHHHHHHHHh
Confidence 4678999999986 999999852 223345675 478899998753
No 116
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.99 E-value=4.5e-05 Score=55.43 Aligned_cols=91 Identities=11% Similarity=0.105 Sum_probs=65.9
Q ss_pred hHhCCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-C
Q psy7942 42 FIADSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-D 116 (216)
Q Consensus 42 ~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p 116 (216)
....+++++|.|+.+||. ...+.+.+++..+ +++.|. .|+-. ...+++++++|++.. |
T Consensus 22 ~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~--------------~v~~~---~d~~~~~~~~~~v~~~P 84 (126)
T 2l57_A 22 EAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIY--------------YARLE---EEKNIDLAYKYDANIVP 84 (126)
T ss_dssp TCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEE--------------EEETT---SSHHHHHHHHTTCCSSS
T ss_pred HHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEE--------------EEeCC---CCchHHHHHHcCCccee
Confidence 345678899999999984 4566888888888 677776 11100 112567899999986 9
Q ss_pred eEEEEecCCCCcccccCCCCCHHHHHHHHhhcCC
Q psy7942 117 TVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSL 150 (216)
Q Consensus 117 ~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~ 150 (216)
++++|.+.......+.|.. +.+.|.+||.....
T Consensus 85 t~~~~~~~G~~~~~~~G~~-~~~~l~~~l~~~~~ 117 (126)
T 2l57_A 85 TTVFLDKEGNKFYVHQGLM-RKNNIETILNSLGV 117 (126)
T ss_dssp EEEEECTTCCEEEEEESCC-CHHHHHHHHHHHCC
T ss_pred EEEEECCCCCEEEEecCCC-CHHHHHHHHHHHhc
Confidence 9999985333344578988 89999999987643
No 117
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=97.97 E-value=2.1e-05 Score=58.38 Aligned_cols=98 Identities=8% Similarity=0.094 Sum_probs=70.3
Q ss_pred CceeecCHHHHHHhHhC--CCeEEEEEecCCChh---HHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecc
Q psy7942 29 PAKEFTSVDEIKAFIAD--SKVVVAGLFKDASSE---LAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTST 103 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~--~~v~~V~f~~~~~~~---~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~ 103 (216)
.+..+++.++++..+++ +++++|.|+.+||.. ..+.|.+++..+ ++.|. .+| ...
T Consensus 21 ~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~v~~~--------------~vd-----~~~ 80 (133)
T 3cxg_A 21 IYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY-YVTLV--------------DID-----VDI 80 (133)
T ss_dssp EEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE-ECEEE--------------EEE-----TTT
T ss_pred cEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc-CEEEE--------------EEe-----ccc
Confidence 35678888899988876 469999999999853 455666666655 45665 344 556
Q ss_pred cHHHHHhcCCCC-CeEEEEe--cCCC-CcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFK--KFDE-GRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~--~~de-~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++++|++.. |++++|+ +... ....+.|. +.+.|.+||...
T Consensus 81 ~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~--~~~~l~~~l~~~ 127 (133)
T 3cxg_A 81 HPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA--NQNDIEKAFQKY 127 (133)
T ss_dssp CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC--CHHHHHHHHHHH
T ss_pred hHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC--CHHHHHHHHHHH
Confidence 788999999986 9999996 3221 12345665 678899998764
No 118
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=97.97 E-value=3.3e-05 Score=63.95 Aligned_cols=99 Identities=17% Similarity=0.201 Sum_probs=73.4
Q ss_pred CceeecCHHHHHHhHhC---CCeEEEEEecCCC---hhHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 29 PAKEFTSVDEIKAFIAD---SKVVVAGLFKDAS---SELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~---~~v~~V~f~~~~~---~~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
.|..|.+.+++...+.. +++++|.||++|| ..+.+.|.++|.++..+.|. .|+ +.
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~v~f~--------------kVd-----~d 173 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPMVKFC--------------KIK-----AS 173 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTTSEEE--------------EEE-----HH
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCCEEE--------------EEe-----CC
Confidence 35677788999988853 7899999999997 45677899999999778887 333 32
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCccccc------C-CCCCHHHHHHHHhhcC
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYE------G-PASDEAALRKFLSTQS 149 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~------G-~~~~~~~l~~fi~~~~ 149 (216)
. ..++.+|++.. |++++|+++.. ...+. | .+ +.+.|..||..+.
T Consensus 174 ~-~~l~~~~~I~~~PTll~~~~G~~-v~~~vG~~~~~g~~~-~~e~Le~~L~~~g 225 (245)
T 1a0r_P 174 N-TGAGDRFSSDVLPTLLVYKGGEL-LSNFISVTEQLAEEF-FTGDVESFLNEYG 225 (245)
T ss_dssp H-HCCTTSSCTTTCSEEEEEETTEE-EEEETTGGGGSCTTC-CHHHHHHHHHTTT
T ss_pred c-HHHHHHCCCCCCCEEEEEECCEE-EEEEeCCcccccccc-cHHHHHHHHHHcC
Confidence 2 55778899986 99999995322 11222 3 25 7889999999875
No 119
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.14 E-value=1.5e-06 Score=60.72 Aligned_cols=95 Identities=19% Similarity=0.290 Sum_probs=66.8
Q ss_pred eeecCHHHHH-HhHhCCCeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccH
Q psy7942 31 KEFTSVDEIK-AFIADSKVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNA 105 (216)
Q Consensus 31 ~~l~s~~~~~-~~~~~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 105 (216)
..+++ +++. ..++++++++|.|+.+|| ....+.+.+++..+ +++.|. .++ ...++
T Consensus 4 ~~l~~-~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~--------------~v~-----~~~~~ 63 (106)
T 2yj7_A 4 IEVTD-ENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVV--------------KVN-----VDENP 63 (106)
Confidence 34543 4554 345678889999999887 34556777777777 356666 344 55567
Q ss_pred HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 106 DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 106 ~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++++|++.. |++++|+++ +....|.|.. +.+.|.+||..
T Consensus 64 ~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~-~~~~l~~~l~~ 104 (106)
T 2yj7_A 64 NTAAQYGIRSIPTLLLFKNG-QVVDRLVGAQ-PKEALKERIDK 104 (106)
Confidence 8899999986 999999642 3344678887 88889998875
No 120
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.89 E-value=1.7e-05 Score=58.94 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=50.3
Q ss_pred cCCCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 148 QSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 148 ~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.++|++.++|.+++..+++++. +.++.|... .+....+...|+++|++|++++.|+++|...
T Consensus 3 c~~plv~~~t~~~f~~~~~~~~-pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~ 64 (133)
T 2djk_A 3 LGSPLIGEIGPETYSDYMSAGI-PLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKA 64 (133)
T ss_dssp CSCCCSEECCHHHHHHHHHTTS-CEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTT
T ss_pred cccCceeccChHHHHHHhcCCC-CEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHH
Confidence 5789999999999998887664 334446554 4567789999999999999999999999654
No 121
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.88 E-value=8.4e-05 Score=55.22 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=69.0
Q ss_pred CceeecCHHHHHHhHhCC---CeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec
Q psy7942 29 PAKEFTSVDEIKAFIADS---KVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS 102 (216)
Q Consensus 29 ~v~~l~s~~~~~~~~~~~---~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t 102 (216)
.+..| +.+++++.+... ++++|.|+.+||. .+.+.|.++|.++.++.|. .|+ ..
T Consensus 11 ~v~~i-~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~~v~~~--------------~vd-----~~ 70 (135)
T 2dbc_A 11 ELREI-SGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFPETKFV--------------KAI-----VN 70 (135)
T ss_dssp SCEEC-CHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCSSEEEE--------------EEC-----CS
T ss_pred ceEEc-CHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCCcEEE--------------EEE-----hh
Confidence 36677 788998877642 5899999999984 5567889999988778887 343 22
Q ss_pred ccHHHHHhcCCCC-CeEEEEecCCCCcccccCC-------CCCHHHHHHHHhhcC
Q psy7942 103 TNADILAEYSVDD-DTVAIFKKFDEGRVNYEGP-------ASDEAALRKFLSTQS 149 (216)
Q Consensus 103 ~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~-------~~~~~~l~~fi~~~~ 149 (216)
.. .++|++.. |++++|++... ...+.|. + +.+.|.+|+..+.
T Consensus 71 ~~---~~~~~i~~~Pt~~~~~~G~~-v~~~~G~~~~~~~~~-~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 71 SC---IEHYHDNCLPTIFVYKNGQI-EGKFIGIIECGGINL-KLEELEWKLSEVG 120 (135)
T ss_dssp SS---CSSCCSSCCSEEEEESSSSC-SEEEESTTTTTCTTC-CHHHHHHHHHHHT
T ss_pred cC---cccCCCCCCCEEEEEECCEE-EEEEEeEEeeCCCcC-CHHHHHHHHHHcC
Confidence 22 26789886 99999985432 3334443 3 6889999998764
No 122
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.77 E-value=9e-05 Score=54.32 Aligned_cols=94 Identities=14% Similarity=0.209 Sum_probs=63.9
Q ss_pred cCHHHHHHh----HhCCCeEEEEEecCCCh---hHHHHHH--HHHhhC-CCceEEecchhhHHHHhhhhccccceeee--
Q psy7942 34 TSVDEIKAF----IADSKVVVAGLFKDASS---ELAKTFN--EIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT-- 101 (216)
Q Consensus 34 ~s~~~~~~~----~~~~~v~~V~f~~~~~~---~~~~~f~--~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~-- 101 (216)
.+.+++++. ...+++++|.|+.+||. ...+.|. +++..+ +++.|. .|+ .
T Consensus 13 ~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~--------------~vd-----~~~ 73 (133)
T 3fk8_A 13 DAWTQVKKALAAGKRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVV--------------KID-----VGN 73 (133)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEE--------------EEE-----CTT
T ss_pred ChHhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEE--------------EEe-----CCc
Confidence 344455443 34689999999999985 3455676 667666 566666 333 4
Q ss_pred -cccHHHHHhcCC---CC-CeEEEEecCCCCcccccC-------CCCCHHHHHHHHhh
Q psy7942 102 -STNADILAEYSV---DD-DTVAIFKKFDEGRVNYEG-------PASDEAALRKFLST 147 (216)
Q Consensus 102 -t~~~~v~~~~~v---~~-p~i~~~~~~de~~~~y~G-------~~~~~~~l~~fi~~ 147 (216)
..+++++++|++ .. |++++|.+..+....+.| .. +.+.|.+|+..
T Consensus 74 ~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~-~~~~l~~~l~~ 130 (133)
T 3fk8_A 74 FDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKM-SDQGIYDFFAK 130 (133)
T ss_dssp TTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGS-CHHHHHHHHHH
T ss_pred ccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccC-CHHHHHHHHHH
Confidence 567889999999 76 999999432232334455 35 88999999875
No 123
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=97.68 E-value=2e-05 Score=71.11 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=70.5
Q ss_pred ceeecCHHHHHHhHhCC--CeEEEEEecCCC---hhHHHHHHHHHhhCC---------CceEEecchhhHHHHhhhhccc
Q psy7942 30 AKEFTSVDEIKAFIADS--KVVVAGLFKDAS---SELAKTFNEIASKVD---------DLVFDASSELAKTFNEIASKVD 95 (216)
Q Consensus 30 v~~l~s~~~~~~~~~~~--~v~~V~f~~~~~---~~~~~~f~~~A~~~~---------~~~F~~~~~~~~~~~~~~~~~~ 95 (216)
+..++. ++++.++..+ ++++|.|+++|| ....+.|.+++..+. .+.|+ .||
T Consensus 25 V~~Lt~-~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~--------------~VD 89 (470)
T 3qcp_A 25 VVDLSG-DDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAA--------------AVN 89 (470)
T ss_dssp EEECSC-SCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEE--------------EEE
T ss_pred cEECCH-HHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEE--------------EEE
Confidence 556654 6788877653 689999999998 456779999999883 37787 566
Q ss_pred cceeeecccHHHHHhcCCCC-CeEEEEecCC-CCcccccCCCCCHHHHHHHHhh
Q psy7942 96 DLVFVTSTNADILAEYSVDD-DTVAIFKKFD-EGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 96 ~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~d-e~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+..+++++++|+|.. |++++|++.. .....|.|.. +.+.| .||..
T Consensus 90 -----~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r-~~e~L-~fI~k 136 (470)
T 3qcp_A 90 -----CASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECGTS-SLEHV-AFENS 136 (470)
T ss_dssp -----TTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCC-CEEEE-ECSCT
T ss_pred -----CCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeCCC-CHHHH-HHHHH
Confidence 777889999999986 9999998643 2356788875 44444 44433
No 124
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.63 E-value=0.00015 Score=48.55 Aligned_cols=77 Identities=17% Similarity=0.285 Sum_probs=58.7
Q ss_pred CeEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEE
Q psy7942 47 KVVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIF 121 (216)
Q Consensus 47 ~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~ 121 (216)
.+.++.|+.+|| ....+.+.+++.++ +++.|. .+| ...+++++++|++.. |++++
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~vd-----~~~~~~~~~~~~v~~~Pt~~~- 62 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVE--------------YIN-----VMENPQKAMEYGIMAVPTIVI- 62 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEE--------------EEE-----SSSSCCTTTSTTTCCSSEEEE-
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEE--------------EEE-----CCCCHHHHHHCCCcccCEEEE-
Confidence 467888999886 56778889999888 477777 344 455678899999986 99998
Q ss_pred ecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 122 KKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 122 ~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+ +.. .+.|.. +.+.|.+||...
T Consensus 63 -~--G~~-~~~G~~-~~~~l~~~l~~~ 84 (85)
T 1fo5_A 63 -N--GDV-EFIGAP-TKEALVEAIKKR 84 (85)
T ss_dssp -T--TEE-ECCSSS-SSHHHHHHHHHH
T ss_pred -C--CEE-eeecCC-CHHHHHHHHHHh
Confidence 2 323 788887 889999998753
No 125
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.61 E-value=0.00098 Score=54.13 Aligned_cols=118 Identities=15% Similarity=0.210 Sum_probs=73.6
Q ss_pred CCcccCCCCCChHHHHHHHHhhhCCCce---------eecCHHHHHHhHhC--CCeEEEEEecCCChhHHHHHHHHHhhC
Q psy7942 4 CLPGERRGGRTAEDIVNWLLKKTGPPAK---------EFTSVDEIKAFIAD--SKVVVAGLFKDASSELAKTFNEIASKV 72 (216)
Q Consensus 4 g~~~~Y~G~Rta~~iv~~l~~~~~~~v~---------~l~s~~~~~~~~~~--~~v~~V~f~~~~~~~~~~~f~~~A~~~ 72 (216)
|....|.| ++.+.|.+|+.+.+..... ...+.++++.++.. .+...+. |.+.++.. ..+++..+
T Consensus 105 g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~-f~~~~~~~---~~~~~~d~ 179 (244)
T 3q6o_A 105 GAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEEIDGFFARNNEEYLALI-FEXGGSYL---AREVALDL 179 (244)
T ss_dssp CEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEE-EECTTCCH---HHHHHHHT
T ss_pred CeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHHHHHHhhcCCCceEEEE-EEECCcch---HHHHHHHh
Confidence 44555655 8999999999988754321 23456889888753 3444444 44444322 23334444
Q ss_pred ---CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 73 ---DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 73 ---~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
..+.++. + ...++.++++|+++. |+++++.+ ++....++....+.+.+..+++.
T Consensus 180 ~~~~~i~v~~--------------~------~~~~~~l~~~f~v~~~Pslvl~~~-~g~~~~~~~~~~~r~~~~~~l~~ 237 (244)
T 3q6o_A 180 SQHKGVAVRR--------------V------LNTEANVVRKFGVTDFPSCYLLFR-NGSVSRVPVLMESRSFYTAYLQR 237 (244)
T ss_dssp TTCTTEEEEE--------------E------ETTCHHHHHHHTCCCSSEEEEEET-TSCEEECCCSSSSHHHHHHHHHT
T ss_pred ccCCceEEEE--------------E------eCchHHHHHHcCCCCCCeEEEEeC-CCCeEeeccccccHHHHHHHHHh
Confidence 4455550 1 334488999999986 99999886 44456666444367777777764
No 126
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.54 E-value=0.00021 Score=47.75 Aligned_cols=76 Identities=14% Similarity=0.239 Sum_probs=57.4
Q ss_pred eEEEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEe
Q psy7942 48 VVVAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFK 122 (216)
Q Consensus 48 v~~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~ 122 (216)
+.+|.|+.+|| ....+.+.+++.++ +++.|. .++ ...+++++++|++.. |++++
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~vd-----~~~~~~~~~~~~v~~~Pt~~~-- 61 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVE--------------KID-----IMVDREKAIEYGLMAVPAIAI-- 61 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEE--------------EEC-----TTTCGGGGGGTCSSCSSEEEE--
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEE--------------EEE-----CCCCHHHHHhCCceeeCEEEE--
Confidence 45777888886 56677888888887 467777 344 556778999999986 99998
Q ss_pred cCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 123 KFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 123 ~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++.. .+.|.. +.+.|.+||...
T Consensus 62 --~G~~-~~~G~~-~~~~l~~~l~~~ 83 (85)
T 1nho_A 62 --NGVV-RFVGAP-SREELFEAINDE 83 (85)
T ss_dssp --TTTE-EEECSS-CCHHHHHHHHHH
T ss_pred --CCEE-EEccCC-CHHHHHHHHHHH
Confidence 2333 688887 788999998764
No 127
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.50 E-value=0.00031 Score=51.01 Aligned_cols=87 Identities=17% Similarity=0.189 Sum_probs=57.9
Q ss_pred hCCCeEEEEEecCCChhH---HHHH---HHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec--ccHHHHHhcCCC
Q psy7942 44 ADSKVVVAGLFKDASSEL---AKTF---NEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS--TNADILAEYSVD 114 (216)
Q Consensus 44 ~~~~v~~V~f~~~~~~~~---~~~f---~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~~~v~ 114 (216)
..+++++|.|+.+||... .+.+ ..++..+ ..+.+. .++ .. .+..++++|++.
T Consensus 25 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~~~~~~~~~~~~v~ 85 (130)
T 2kuc_A 25 VEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNL--------------KMD-----MEKGEGVELRKKYGVH 85 (130)
T ss_dssp HHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEE--------------EEC-----SSSTTHHHHHHHTTCC
T ss_pred hcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEE--------------EEe-----cCCcchHHHHHHcCCC
Confidence 467889999999998543 3344 3344333 344444 222 32 356789999998
Q ss_pred C-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcCC
Q psy7942 115 D-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQSL 150 (216)
Q Consensus 115 ~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~~ 150 (216)
. |+++++.+.......+.|.. +.+.|.+||....-
T Consensus 86 ~~Pt~~~~d~~G~~~~~~~G~~-~~~~l~~~l~~~~~ 121 (130)
T 2kuc_A 86 AYPTLLFINSSGEVVYRLVGAE-DAPELLKKVKLGVE 121 (130)
T ss_dssp SSCEEEEECTTSCEEEEEESCC-CHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcEEEEecCCC-CHHHHHHHHHHHHH
Confidence 6 99999954223234577988 89999999987643
No 128
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.08 E-value=0.0088 Score=45.18 Aligned_cols=107 Identities=16% Similarity=0.188 Sum_probs=65.1
Q ss_pred HHHhhhCCCceeecCHHHHHHhHhCCCeEEEEEecCCC----hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccc
Q psy7942 21 WLLKKTGPPAKEFTSVDEIKAFIADSKVVVAGLFKDAS----SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVD 95 (216)
Q Consensus 21 ~l~~~~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~----~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~ 95 (216)
.|++..-|.|.+++. +....+.++.-...+.+|.+.+ ......|.++|+.+ +.+.|.. +|
T Consensus 7 ~~~~~~~PLV~e~t~-en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~--------------vd 71 (147)
T 3bj5_A 7 HMKHNQLPLVIEFTE-QTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAF--------------ID 71 (147)
T ss_dssp --------CEEECCT-TTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEE--------------EC
T ss_pred chhhccCCeeEEecc-ccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEE--------------Ee
Confidence 356666788888864 5567776554444444454322 23567899999999 6788872 22
Q ss_pred cceeee--cccHHHHHhcCCC---CCeEEEEec-CCCCccccc-CCCCCHHHHHHHHhhc
Q psy7942 96 DLVFVT--STNADILAEYSVD---DDTVAIFKK-FDEGRVNYE-GPASDEAALRKFLSTQ 148 (216)
Q Consensus 96 ~~~~~~--t~~~~v~~~~~v~---~p~i~~~~~-~de~~~~y~-G~~~~~~~l~~fi~~~ 148 (216)
. .....+++.+|++ .|+|+++.. .+.....+. |++ +.+.|.+|+...
T Consensus 72 -----~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~-t~~~i~~Fv~d~ 125 (147)
T 3bj5_A 72 -----SDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEEL-TAERITEFCHRF 125 (147)
T ss_dssp -----TTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCC-CHHHHHHHHHHH
T ss_pred -----cchHhHHHHHHHcCCCcccCCEEEEEecccccccCCCCcccC-CHHHHHHHHHHH
Confidence 2 2233577889987 499998874 233233444 788 899999999865
No 129
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.03 E-value=0.0057 Score=43.96 Aligned_cols=102 Identities=12% Similarity=0.126 Sum_probs=64.3
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEE-e-cchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC-Ce
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFD-A-SSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD-DT 117 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~-~-~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~-p~ 117 (216)
.+++++|.|+.+||. ...+.+.+++.++.++.|. + +......+.+.+.+..- .-.+...+.++++.|++.. |+
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~ 102 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPA 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSE
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCE
Confidence 467888889999984 4456777777777655543 1 11223333333333321 1111223567899999986 99
Q ss_pred EEEEecCCCCccccc---CCCCCHHHHHHHHhhc
Q psy7942 118 VAIFKKFDEGRVNYE---GPASDEAALRKFLSTQ 148 (216)
Q Consensus 118 i~~~~~~de~~~~y~---G~~~~~~~l~~fi~~~ 148 (216)
++++.+...-. .+. |.. +.+.|.++|...
T Consensus 103 ~~lid~~G~i~-~~~~~~g~~-~~~~l~~~l~~l 134 (136)
T 1lu4_A 103 FVFYRADGTST-FVNNPTAAM-SQDELSGRVAAL 134 (136)
T ss_dssp EEEECTTSCEE-EECCSSSCC-CHHHHHHHHHHC
T ss_pred EEEECCCCcEE-EEEcCCCcc-CHHHHHHHHHHH
Confidence 99996533323 677 888 899999999864
No 130
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=96.88 E-value=0.011 Score=42.16 Aligned_cols=102 Identities=13% Similarity=0.173 Sum_probs=64.6
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEe--cchhhHHHHhhhhccc--cceeeecccHHHHHhcCCCC-C
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDA--SSELAKTFNEIASKVD--DLVFVTSTNADILAEYSVDD-D 116 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~--~~~~~~~~~~~~~~~~--~~~~~~t~~~~v~~~~~v~~-p 116 (216)
.+++++|.|+.+||. ...+.+.+++.++.++.|.. +......+.+.+.+.. +.-.+...+..+++.|++.. |
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 103 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQP 103 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCc
Confidence 467888889999984 44567777777775555431 1122333333333332 11111234567899999986 9
Q ss_pred eEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 117 TVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 117 ~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++.+...-. .+.|.. +.+.|.++|...
T Consensus 104 ~~~~id~~g~i~-~~~g~~-~~~~l~~~l~~~ 133 (136)
T 1zzo_A 104 AYAFVDPHGNVD-VVRGRM-SQDELTRRVTAL 133 (136)
T ss_dssp EEEEECTTCCEE-EEESCC-CHHHHHHHHHHH
T ss_pred eEEEECCCCCEE-EEecCC-CHHHHHHHHHHH
Confidence 999997533323 688988 899999998764
No 131
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=96.84 E-value=0.0034 Score=47.86 Aligned_cols=40 Identities=8% Similarity=0.036 Sum_probs=29.7
Q ss_pred HHhcCCCC-CeEEEEecCCCCcccccCCCCC-HHHHHHHHhhc
Q psy7942 108 LAEYSVDD-DTVAIFKKFDEGRVNYEGPASD-EAALRKFLSTQ 148 (216)
Q Consensus 108 ~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~-~~~l~~fi~~~ 148 (216)
++.|++.+ |+++++.+..+....+.|.. + .+.+.+||...
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~-~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYD-EDISKYINFLQTG 164 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSC-CCHHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCC-CCHHHHHHHHHHH
Confidence 57899986 99999964333344567888 6 99999998763
No 132
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=96.83 E-value=0.0015 Score=46.53 Aligned_cols=75 Identities=13% Similarity=0.042 Sum_probs=49.2
Q ss_pred CeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeec--ccHHHHHhcCCCC-CeEEE
Q psy7942 47 KVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTS--TNADILAEYSVDD-DTVAI 120 (216)
Q Consensus 47 ~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~~~v~~-p~i~~ 120 (216)
++.+|.|+++||. ...+.|.++|..+. +. .++. ... .+++++++|++.. |++++
T Consensus 13 k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~---~v--------------~~~~---~~~~~~~~~l~~~~~V~~~PT~~i 72 (106)
T 3kp8_A 13 QIGGTMYGAYWCPHCQDQKELFGAAFDQVP---YV--------------ECSP---NGPGTPQAQECTEAGITSYPTWII 72 (106)
T ss_dssp HHTCEEEECTTCHHHHHHHHHHGGGGGGSC---EE--------------ESCT---TCTTSCCCHHHHHTTCCSSSEEEE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHhCC---EE--------------EEec---ccccchhHHHHHHcCCeEeCEEEE
Confidence 4457778999984 44556666665553 22 0100 011 4678999999987 99877
Q ss_pred EecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 121 FKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 121 ~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+ +. .|.|.. +.+.|.+|+.-.
T Consensus 73 --~--G~--~~~G~~-~~~~l~~~~~~~ 93 (106)
T 3kp8_A 73 --N--GR--TYTGVR-SLEALAVASGYP 93 (106)
T ss_dssp --T--TE--EEESCC-CHHHHHHHHTCC
T ss_pred --C--CE--EecCCC-CHHHHHHHhCCc
Confidence 2 22 489998 999999998543
No 133
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.73 E-value=0.00025 Score=51.54 Aligned_cols=92 Identities=12% Similarity=0.132 Sum_probs=60.0
Q ss_pred HHHHHhHhCCCeEEEEEecCCChh---HHHHH---HHHHhhC-CCceEEecchhhHHHHhhhhccccceeee--cccHHH
Q psy7942 37 DEIKAFIADSKVVVAGLFKDASSE---LAKTF---NEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT--STNADI 107 (216)
Q Consensus 37 ~~~~~~~~~~~v~~V~f~~~~~~~---~~~~f---~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~v 107 (216)
+.+......+++++|.|+.+||.. ..+.+ .+++..+ .++.|. .++ . ..+.++
T Consensus 10 ~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~--------------~vd-----~~~~~~~~~ 70 (130)
T 2lst_A 10 EALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVA--------------SVS-----VDTPEGQEL 70 (130)
Confidence 344445557788999999999743 34455 5566555 345554 222 2 234578
Q ss_pred HHhcCCCC-CeEEEEecCCCC---cccccCCCCCHHHHHHHHhhc
Q psy7942 108 LAEYSVDD-DTVAIFKKFDEG---RVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 108 ~~~~~v~~-p~i~~~~~~de~---~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++|++.. |++++|.+.++. ...+.|.. +.+.|.+||...
T Consensus 71 ~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~-~~~~l~~~l~~~ 114 (130)
T 2lst_A 71 ARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSR-PRAEFLKELRQV 114 (130)
Confidence 89999986 999999532222 34578887 778888888754
No 134
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=96.70 E-value=0.0044 Score=44.59 Aligned_cols=74 Identities=8% Similarity=0.097 Sum_probs=54.2
Q ss_pred eEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCCCeEEEEecC
Q psy7942 48 VVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDDDTVAIFKKF 124 (216)
Q Consensus 48 v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~p~i~~~~~~ 124 (216)
..++.|+.+||. ...+.+.+++..+. +.|. .+| ...+++++++|++..|+|++|..
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~-i~~~--------------~vD-----Id~d~~l~~~ygv~VP~l~~~~d- 88 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW-FELE--------------VIN-----IDGNEHLTRLYNDRVPVLFAVNE- 88 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC-CCCE--------------EEE-----TTTCHHHHHHSTTSCSEEEETTT-
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC-CeEE--------------EEE-----CCCCHHHHHHhCCCCceEEEEEC-
Confidence 456678889983 44556667777663 5665 344 56688999999998899999884
Q ss_pred CCCcccccCCCCCHHHHHHHH
Q psy7942 125 DEGRVNYEGPASDEAALRKFL 145 (216)
Q Consensus 125 de~~~~y~G~~~~~~~l~~fi 145 (216)
+ ...+.|.+ +.+.|.+||
T Consensus 89 -G-~~v~~g~~-~~~~L~~~L 106 (107)
T 2fgx_A 89 -D-KELCHYFL-DSDVIGAYL 106 (107)
T ss_dssp -T-EEEECSSC-CCHHHHHHH
T ss_pred -C-EEEEecCC-CHHHHHHHh
Confidence 3 33456888 888999987
No 135
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=96.68 E-value=0.013 Score=42.38 Aligned_cols=101 Identities=9% Similarity=0.149 Sum_probs=62.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEEe--cc---hhhHHHHhhhhcccc-ceeeecccHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFDA--SS---ELAKTFNEIASKVDD-LVFVTSTNADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~~--~~---~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.+++.++. ++.|.. +. ...+.+...+.+.+- .-.+...+..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 567899999999984 44567788888873 555431 11 122233333222221 11112345678999999
Q ss_pred CC-CeEEEEecCCCCcccccCCCCCHHHHHHHHh
Q psy7942 114 DD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLS 146 (216)
Q Consensus 114 ~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~ 146 (216)
.. |+++++.+...-...+.|.. +.+.|.++|.
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~ 145 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPM-TAEQLKEWTE 145 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCC-CHHHHHHHHC
T ss_pred CccCeEEEEcCCCcEEEEEcCCc-CHHHHHHhhC
Confidence 86 99999964333234578888 8999998873
No 136
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=96.64 E-value=0.025 Score=41.76 Aligned_cols=103 Identities=8% Similarity=0.092 Sum_probs=62.9
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCceEE-ecchhhHHHHhhhhcccc-c-eee--ecccHHHHHhcC--
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDLVFD-ASSELAKTFNEIASKVDD-L-VFV--TSTNADILAEYS-- 112 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~F~-~~~~~~~~~~~~~~~~~~-~-~~~--~t~~~~v~~~~~-- 112 (216)
.+++++|.|+.+||. ...+.+.+++.++ .++.|. ++-...+.+.+.+.+.+- . ++. ......+++.|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 568999999999985 4466777777777 345442 221222223333322221 0 111 112356788898
Q ss_pred CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 113 VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 113 v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+.. |+++++.+...-...|.|.. +.+.|.++|...
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEV-NEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCC-CHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEEECCCC-CHHHHHHHHHHH
Confidence 765 99999875333345678988 899999998753
No 137
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=96.56 E-value=0.019 Score=37.19 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=49.1
Q ss_pred EEEEecCCC---hhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecC
Q psy7942 50 VAGLFKDAS---SELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKF 124 (216)
Q Consensus 50 ~V~f~~~~~---~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~ 124 (216)
.|.||.+|| ....+.+.+++..+ .++.+. ...+.+++++|++.. |++++
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~----------------------~v~~~~~~~~~~v~~~Pt~~~---- 56 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFE----------------------KIKEMDQILEAGLTALPGLAV---- 56 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEE----------------------EECSHHHHHHHTCSSSSCEEE----
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEE----------------------EecCHHHHHHCCCCcCCEEEE----
Confidence 466788886 45667788888887 467666 333788999999986 99998
Q ss_pred CCCcccccCCCCCHHHHHHHH
Q psy7942 125 DEGRVNYEGPASDEAALRKFL 145 (216)
Q Consensus 125 de~~~~y~G~~~~~~~l~~fi 145 (216)
++ ...+.|...+.+.|.+|+
T Consensus 57 ~G-~~~~~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 57 DG-ELKIMGRVASKEEIKKIL 76 (77)
T ss_dssp TT-EEEECSSCCCHHHHHHHC
T ss_pred CC-EEEEcCCCCCHHHHHHHh
Confidence 23 333447632678888886
No 138
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=96.55 E-value=0.024 Score=40.20 Aligned_cols=102 Identities=21% Similarity=0.224 Sum_probs=64.3
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEE-e------cchhhHHHHhhhhccc--cceeeecccHHHHHhc
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFD-A------SSELAKTFNEIASKVD--DLVFVTSTNADILAEY 111 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~-~------~~~~~~~~~~~~~~~~--~~~~~~t~~~~v~~~~ 111 (216)
.+++++|.|+.+||. ...+.+.+++.++ +++.|. + .....+.+...+.+.+ ..-.....+..+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 467889999999984 4455667777766 345433 2 1223334444433332 1111133456789999
Q ss_pred CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 112 SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 112 ~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
++.. |+++++.+...-...+.|.. +.+.|.++|..
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFM-EKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCC-CHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCC-cHHHHHHHHHh
Confidence 9986 99999965333334577888 88999999875
No 139
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=96.50 E-value=0.0033 Score=48.10 Aligned_cols=102 Identities=11% Similarity=-0.007 Sum_probs=59.4
Q ss_pred hCCCceeecCHHHHHHhHhCCCeEEEEEecCCChhH---HHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeee
Q psy7942 26 TGPPAKEFTSVDEIKAFIADSKVVVAGLFKDASSEL---AKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVT 101 (216)
Q Consensus 26 ~~~~v~~l~s~~~~~~~~~~~~v~~V~f~~~~~~~~---~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~ 101 (216)
.++.+.-.+-.+.++.....+++++|.|+.+||... .+.|.+++... ..+.|. .|+ .
T Consensus 26 ~~~~i~w~~~~~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~--------------~v~-----~ 86 (164)
T 1sen_A 26 FGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFV--------------MVN-----L 86 (164)
T ss_dssp SCTTSCBCCHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSE--------------EEE-----E
T ss_pred ccccccccCHHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEE--------------EEE-----e
Confidence 344443322235566667778999999999998543 44555544333 223333 122 3
Q ss_pred cccHH-HHHhcCC--C-CCeEEEEecCCCCcccccCC----------CCCHHHHHHHHhh
Q psy7942 102 STNAD-ILAEYSV--D-DDTVAIFKKFDEGRVNYEGP----------ASDEAALRKFLST 147 (216)
Q Consensus 102 t~~~~-v~~~~~v--~-~p~i~~~~~~de~~~~y~G~----------~~~~~~l~~fi~~ 147 (216)
..+++ ++..+++ . .|++++|.+.......+.|. . +.+.|.++|..
T Consensus 87 d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~-~~~~l~~~l~~ 145 (164)
T 1sen_A 87 EDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYV-SAEQVVQGMKE 145 (164)
T ss_dssp EGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCC-SHHHHHHHHHH
T ss_pred cCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccC-CHHHHHHHHHH
Confidence 33444 6677777 3 39999994322223335553 4 78888888875
No 140
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=96.37 E-value=0.016 Score=42.02 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=61.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC-CCceEE-ec-ch-----hhHHHHhhhhcccc-ceeeecccHHHHHhcC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV-DDLVFD-AS-SE-----LAKTFNEIASKVDD-LVFVTSTNADILAEYS 112 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~-~~-~~-----~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~ 112 (216)
.+++++|.|+.+||. ...+.+.+++.++ +.+.|. ++ .. ....+.+.+.+..- .-++...+..+++.|+
T Consensus 28 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 107 (148)
T 2b5x_A 28 GEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFE 107 (148)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTC
T ss_pred CCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhC
Confidence 567888889999984 4456777777776 336553 11 00 22333333333221 1111233567899999
Q ss_pred CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 113 VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 113 v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+.. |+++++.+...-...+.|.. +.+.|.++|...
T Consensus 108 v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~~ 143 (148)
T 2b5x_A 108 NEYVPAYYVFDKTGQLRHFQAGGS-GMKMLEKRVNRV 143 (148)
T ss_dssp CCCSSEEEEECTTCBEEEEEESCS-TTHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcEEEEecCCC-CHHHHHHHHHHH
Confidence 986 99999954222233457877 778888888753
No 141
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=96.31 E-value=0.031 Score=41.06 Aligned_cols=103 Identities=11% Similarity=0.108 Sum_probs=64.2
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCceEE-ec--chhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDLVFD-AS--SELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~F~-~~--~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~ 115 (216)
.+++++|.|+..||. ...+.+.+++.++ ..+.|. ++ ......+...+.+..- .-.....+..+++.|++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 567888999999884 4456777777777 235442 21 1223333333333321 1111344667899999986
Q ss_pred -CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 116 -DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 116 -p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
|+++++.+...-...|.|.. +.+.|.++|...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~l 139 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEP-DFGKLYQEIDTA 139 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSC-CHHHHHHHHHHH
T ss_pred cCeEEEECCCCcEEEEEcCCC-CHHHHHHHHHHH
Confidence 99999965333334578887 889999988753
No 142
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.17 E-value=0.067 Score=48.62 Aligned_cols=115 Identities=12% Similarity=0.207 Sum_probs=71.9
Q ss_pred ccCCCCCChHHHHHHHHhhhCCCc----------eeecCHHHHHHhHhC--CCeEEEEEecCCChhHHHHHHHHHhhC--
Q psy7942 7 GERRGGRTAEDIVNWLLKKTGPPA----------KEFTSVDEIKAFIAD--SKVVVAGLFKDASSELAKTFNEIASKV-- 72 (216)
Q Consensus 7 ~~Y~G~Rta~~iv~~l~~~~~~~v----------~~l~s~~~~~~~~~~--~~v~~V~f~~~~~~~~~~~f~~~A~~~-- 72 (216)
..+.|+++.+.|.+++.+.+.... ..+ +.++++.++.. .+.+++. |.+.++... .+++..+
T Consensus 107 ~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~i-t~~~l~~~l~~~~~~~vall-F~~~~s~~~---~~~~ldl~~ 181 (519)
T 3t58_A 107 TLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPA-KLNDIDGFFTRNKADYLALV-FEREDSYLG---REVTLDLSQ 181 (519)
T ss_dssp EECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBC-CHHHHTTGGGSCCCSEEEEE-EECTTCCHH---HHHHHHTTT
T ss_pred eEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcC-CHHHHHHHhccCCCCeEEEE-ecCCchHHH---HHHHHHhhc
Confidence 457789999999999998886422 333 56888888865 3344444 445444332 3334444
Q ss_pred -CCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 73 -DDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 73 -~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
..+.++. +...+.+++++|+|+. |+++++.+. +....+.......+.+..+++.
T Consensus 182 ~~~v~v~~--------------------v~~~~~~l~~kfgV~~~Pslvl~~~n-Gk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 182 YHAVAVRR--------------------VLNTESDLVNKFGVTDFPSCYLLLRN-GSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CTTEEEEE--------------------EETTCHHHHHHHTCCCSSEEEEEETT-SCEEECCCSSCSHHHHHHHHTT
T ss_pred cCCeeEEE--------------------ecCchHHHHHHcCCCCCCeEEEEeCC-CceeecccccccHHHHHHHHHH
Confidence 4455551 1444578999999985 999999863 3333333333245667778775
No 143
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=96.13 E-value=0.011 Score=46.13 Aligned_cols=85 Identities=19% Similarity=0.205 Sum_probs=60.0
Q ss_pred HHHHhhhCCCceeec-CHHHHHHhHhCCCeEEEEEecCCChhHHH----HH--HHHHhhC-CCceEEecchhhHHHHhhh
Q psy7942 20 NWLLKKTGPPAKEFT-SVDEIKAFIADSKVVVAGLFKDASSELAK----TF--NEIASKV-DDLVFDASSELAKTFNEIA 91 (216)
Q Consensus 20 ~~l~~~~~~~v~~l~-s~~~~~~~~~~~~v~~V~f~~~~~~~~~~----~f--~~~A~~~-~~~~F~~~~~~~~~~~~~~ 91 (216)
-|++.+...+|.=.. +.+.++.....+++++|-|+.+||..... .| .+++..+ +++.+.
T Consensus 12 pyl~~ha~~~v~W~~~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~i------------- 78 (173)
T 3ira_A 12 PYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSI------------- 78 (173)
T ss_dssp HHHHTTTTSSSCCBCSSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEE-------------
T ss_pred HHHHhccCCCCCCCCcCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCcee-------------
Confidence 477888777775433 46788888888999999999999965433 23 2445544 345555
Q ss_pred hccccceeeecccHHHHHhc--------CCCC-CeEEEEec
Q psy7942 92 SKVDDLVFVTSTNADILAEY--------SVDD-DTVAIFKK 123 (216)
Q Consensus 92 ~~~~~~~~~~t~~~~v~~~~--------~v~~-p~i~~~~~ 123 (216)
.|| ....+++.+.| ++.+ |+++++.+
T Consensus 79 -kVD-----~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~ 113 (173)
T 3ira_A 79 -KVD-----REERPDIDNIYMTVCQIILGRGGWPLNIIMTP 113 (173)
T ss_dssp -EEE-----TTTCHHHHHHHHHHHHHHHSCCCSSEEEEECT
T ss_pred -eeC-----CcccCcHHHHHHHHHHHHcCCCCCcceeeECC
Confidence 444 55567888877 8876 99999985
No 144
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=96.09 E-value=0.036 Score=40.60 Aligned_cols=103 Identities=9% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCCeEEEEEecCCC---hhHHHHHHHHHhhCC--CceEE-e-cchhhHHHHhhhhcccc--ceeeecccHHHHHhcCCCC
Q psy7942 45 DSKVVVAGLFKDAS---SELAKTFNEIASKVD--DLVFD-A-SSELAKTFNEIASKVDD--LVFVTSTNADILAEYSVDD 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~---~~~~~~f~~~A~~~~--~~~F~-~-~~~~~~~~~~~~~~~~~--~~~~~t~~~~v~~~~~v~~ 115 (216)
.+++++|.|+.+|| ....+.+.+++.++. ++.|. + ++.....+.+.+.+..- ..+....+..+++.|++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 46788899998887 445677888888773 35443 1 11112333333332211 1111223457889999986
Q ss_pred -CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 116 -DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 116 -p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
|+++++.+...-...+.|.. +.+.|.++|...
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~~ 141 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRP-SDPKTAEKFNEL 141 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCT-TCHHHHHHHHHH
T ss_pred CCEEEEECCCCeEEEccCCCC-CHHHHHHHHHHH
Confidence 99999985333233456776 778888888754
No 145
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=96.02 E-value=0.011 Score=43.04 Aligned_cols=83 Identities=12% Similarity=0.022 Sum_probs=51.5
Q ss_pred CCCeEEEEEecCCChhHHHHHHHHHhhCC-C-----ceEEecchhhHHHHhhhhccccceeeeccc--HHHHHhcCCCC-
Q psy7942 45 DSKVVVAGLFKDASSELAKTFNEIASKVD-D-----LVFDASSELAKTFNEIASKVDDLVFVTSTN--ADILAEYSVDD- 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~~~~f~~~A~~~~-~-----~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~--~~v~~~~~v~~- 115 (216)
+...++|.|+++||......=.+++..+. . +.+. ++| .+.+ ++++.++++.+
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~--------------~vd-----v~~~~~~~la~~~~V~g~ 77 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQ--------------RLQ-----MRDPLPPGLELARPVTFT 77 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEE--------------EEE-----TTSCCCTTCBCSSCCCSS
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEE--------------EEE-----CCCCCchhHHHHCCCCCC
Confidence 45678999999999543322123333331 1 2333 222 3332 46788889876
Q ss_pred CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 116 DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 116 p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
||+++|+++. ......|-. ..+.+..|+...
T Consensus 78 PT~i~f~~G~-ev~Ri~G~~-~~~~f~~~L~~~ 108 (116)
T 3dml_A 78 PTFVLMAGDV-ESGRLEGYP-GEDFFWPMLARL 108 (116)
T ss_dssp SEEEEEETTE-EEEEEECCC-CHHHHHHHHHHH
T ss_pred CEEEEEECCE-EEeeecCCC-CHHHHHHHHHHH
Confidence 9999999543 345678888 889999998753
No 146
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=95.92 E-value=0.025 Score=41.67 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=63.9
Q ss_pred CeEEEEEecCCCh---hHHHHHHHHHhhCCCceEE-e-c--chhhHHHHhhhhccccc-eeee---cccHHHHHhcCCCC
Q psy7942 47 KVVVAGLFKDASS---ELAKTFNEIASKVDDLVFD-A-S--SELAKTFNEIASKVDDL-VFVT---STNADILAEYSVDD 115 (216)
Q Consensus 47 ~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~-~-~--~~~~~~~~~~~~~~~~~-~~~~---t~~~~v~~~~~v~~ 115 (216)
++++|.|+.+||. ...+.+.+++.++ ++.|. + + ....+.+.+.+.+.+-. -.+. ..+..+++.|++..
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~ 109 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLG 109 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCS
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCc
Confidence 7888889999985 4455677777766 44432 1 1 13344444444444321 1111 14567889999986
Q ss_pred -CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 116 -DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 116 -p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
|+++++.+...-...+.|.. +.+.|.++|.+..
T Consensus 110 ~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 110 QPWTFVVDREGKVVALFAGRA-GREALLDALLLAG 143 (154)
T ss_dssp SCEEEEECTTSEEEEEEESBC-CHHHHHHHHHHTT
T ss_pred ccEEEEECCCCCEEEEEcCCC-CHHHHHHHHHhcc
Confidence 99888864222234567888 8999999998764
No 147
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=95.91 E-value=0.039 Score=40.51 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=61.6
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEEe--cchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC-
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFDA--SSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD- 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~~--~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~- 115 (216)
.+++++|.|+..||. ...+.+.+++.++. ++.|.. +......+...+.+..- .-.+...+..+++.|++..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 467889999999984 44556777776662 354431 11122223333322221 1111223457899999986
Q ss_pred CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 116 DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 116 p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
|+++++.+.......+.|.. +.+.|.++|...
T Consensus 105 P~~~lid~~G~i~~~~~G~~-~~~~l~~~l~~l 136 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTM-TESMIHDYMNLI 136 (151)
T ss_dssp CEEEEECTTSEEEEEEESCC-CHHHHHHHHHHH
T ss_pred CeEEEECCCCcEEEEEeCCC-CHHHHHHHHHHH
Confidence 99999854222233467888 889999998864
No 148
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=95.90 E-value=0.041 Score=40.82 Aligned_cols=104 Identities=12% Similarity=0.116 Sum_probs=64.0
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCceE-Eec------chhhHHHHhhhhcccc--ceeeecccHHHHHh
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDLVF-DAS------SELAKTFNEIASKVDD--LVFVTSTNADILAE 110 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~F-~~~------~~~~~~~~~~~~~~~~--~~~~~t~~~~v~~~ 110 (216)
.+++++|.|+.+||. ...+.+.+++.++ .++.| +++ ....+.+.+.....+- .-.....+.++++.
T Consensus 37 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 116 (164)
T 2h30_A 37 KDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQN 116 (164)
T ss_dssp TTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHH
Confidence 467899999999985 4456777777765 34433 221 1122333333332210 11113345678999
Q ss_pred cCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 111 YSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 111 ~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
|++.. |+++++.+...-...+.|.. +.+.|.++|....
T Consensus 117 ~~v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~i~~~~ 155 (164)
T 2h30_A 117 LNISVYPSWALIGKDGDVQRIVKGSI-NEAQALALIRNPN 155 (164)
T ss_dssp TTCCSSSEEEEECTTSCEEEEEESCC-CHHHHHHHHHCTT
T ss_pred cCCCccceEEEECCCCcEEEEEcCCC-CHHHHHHHHHHHH
Confidence 99986 99999954223234467888 8999999998753
No 149
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=95.88 E-value=0.049 Score=40.40 Aligned_cols=103 Identities=9% Similarity=0.135 Sum_probs=59.9
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEE-e-cchhhHHHHhhhhccccceeeecccHHHHHhc------
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFD-A-SSELAKTFNEIASKVDDLVFVTSTNADILAEY------ 111 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~-~-~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~------ 111 (216)
.+++++|.|+.+||. ...+.+.+++.++. .+.|. + ++...+.+.+.+.+.+-..-+...+.++.+.|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 467899999999984 44567777777763 35443 2 12222333333333221100122334566666
Q ss_pred CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 112 SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 112 ~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++.. |+++++.+...-...+.|.. +.+.|.++|...
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPR-SKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCC-CHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCC-CHHHHHHHHHHH
Confidence 6765 99998864222234567888 899999998764
No 150
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=95.83 E-value=0.036 Score=41.54 Aligned_cols=84 Identities=17% Similarity=0.108 Sum_probs=51.4
Q ss_pred hCCCeEEEEEe-cCCChhHH---HHH---HHHHhhC-CCceEEecchhhHHHHhhhhccccceeeecc-----------c
Q psy7942 44 ADSKVVVAGLF-KDASSELA---KTF---NEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTST-----------N 104 (216)
Q Consensus 44 ~~~~v~~V~f~-~~~~~~~~---~~f---~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~-----------~ 104 (216)
..+++++|.|+ .+||.... +.+ .+++..+ .++.+. .+| ... +
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v--------------~vd-----~~~~~~~~~~~~~~~ 105 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMV--------------EVD-----FPQKNHQPEEQRQKN 105 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEE--------------EEE-----CCSSCCCCHHHHHHH
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEE--------------Eec-----CccccCCChhhHhhH
Confidence 45788999998 89985443 344 3444433 344444 222 222 2
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCC-CCHHHHHHHHhh
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPA-SDEAALRKFLST 147 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~-~~~~~l~~fi~~ 147 (216)
.++++.|++.+ |+++++.+.......+ |.. .+.+.+.++|..
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 47889999986 9999995422223334 643 167888888865
No 151
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=95.66 E-value=0.023 Score=39.03 Aligned_cols=60 Identities=10% Similarity=0.068 Sum_probs=49.1
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
-+.+..++.+++......+ ++.++.|...+.+........+.++++++++++.|+.+|..
T Consensus 3 ~~~v~~l~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~ 62 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIRNN-KLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD 62 (109)
T ss_dssp CCCCEECCTTTHHHHHHHS-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT
T ss_pred CCeEEEecHHHHHHHHhcC-CeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc
Confidence 3567889999998887765 45566688888888899999999999999999888887754
No 152
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=95.60 E-value=0.071 Score=40.98 Aligned_cols=89 Identities=4% Similarity=-0.134 Sum_probs=55.5
Q ss_pred HHHHHhHh-CCCeEEEEEecCCChh---HHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeecccHHHHHhcC
Q psy7942 37 DEIKAFIA-DSKVVVAGLFKDASSE---LAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTNADILAEYS 112 (216)
Q Consensus 37 ~~~~~~~~-~~~v~~V~f~~~~~~~---~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~ 112 (216)
+..+.+.. .+++++|.|+++||.+ ..+.+.+++..++++.|. .++ ...+++++.+|.
T Consensus 44 ~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~~v~~~--------------~v~-----~d~~~~~~~~~~ 104 (167)
T 1z6n_A 44 ALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQPNIELA--------------IIS-----KGRAEDDLRQRL 104 (167)
T ss_dssp HHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCTTEEEE--------------EEC-----HHHHHHHTTTTT
T ss_pred HHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCCCcEEE--------------EEE-----CCCCHHHHHHHH
Confidence 33344432 4678899999999854 466888888888777776 222 334566777776
Q ss_pred ---CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 113 ---VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 113 ---v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+.. |+++++++.......+ |.. . ..+...+..
T Consensus 105 ~~~v~~iPt~i~~~~~G~~~~~~-g~~-p-~~~~~~i~~ 140 (167)
T 1z6n_A 105 ALERIAIPLVLVLDEEFNLLGRF-VER-P-QAVLDGGPQ 140 (167)
T ss_dssp TCSSCCSSEEEEECTTCCEEEEE-ESS-C-HHHHHHCHH
T ss_pred HcCCCCcCeEEEECCCCCEEEEE-cCC-C-HHHHHhHHH
Confidence 665 9999999632322233 444 2 445555553
No 153
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=95.49 E-value=0.081 Score=39.26 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=59.5
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEEe-cchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC-C
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFDA-SSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD-D 116 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~~-~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~-p 116 (216)
.+++++|.|+..||. ...+.+.+++.++. ++.|.. +-. +.+.+...+..- .-.+...+.++.+.|++.. |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 117 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVE--KRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLP 117 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECS--SSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCC--HHHHHHHHHcCCCceEEECchHHHHHHhCCCCcc
Confidence 467899999999984 44567778888873 555431 000 001111111110 1111223567899999986 9
Q ss_pred eEEEEecCCCCcccccCCC-CCHHHHHHHHhhcCCC
Q psy7942 117 TVAIFKKFDEGRVNYEGPA-SDEAALRKFLSTQSLP 151 (216)
Q Consensus 117 ~i~~~~~~de~~~~y~G~~-~~~~~l~~fi~~~~~P 151 (216)
+++++.+...-...+.|.. .+..++.+.+..+..|
T Consensus 118 ~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~ 153 (158)
T 3hdc_A 118 DTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGH 153 (158)
T ss_dssp EEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC--
T ss_pred eEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhccc
Confidence 9888865222234456643 1677888888887765
No 154
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=95.45 E-value=0.042 Score=37.60 Aligned_cols=58 Identities=12% Similarity=0.157 Sum_probs=46.2
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+++.+++......+ ++.++.|...+.+........+.++++++.+++.++.+|...
T Consensus 2 v~~l~~~~~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~ 59 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGD-GPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE 59 (105)
T ss_dssp CEEECTTTHHHHHSSS-SCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT
T ss_pred ceeccHHhHHHHHhCC-CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC
Confidence 5678888888777665 455667888888888889999999999999888888877543
No 155
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=95.39 E-value=0.21 Score=36.61 Aligned_cols=103 Identities=13% Similarity=0.170 Sum_probs=63.7
Q ss_pred CCCeEEEEEecCCCh---h-HHHHHHHHHhhCC--CceE-Eec-------chhhHHHHhhhhcccc-ceeeecccHH---
Q psy7942 45 DSKVVVAGLFKDASS---E-LAKTFNEIASKVD--DLVF-DAS-------SELAKTFNEIASKVDD-LVFVTSTNAD--- 106 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~-~~~~f~~~A~~~~--~~~F-~~~-------~~~~~~~~~~~~~~~~-~~~~~t~~~~--- 106 (216)
.+++++|.|+..||. . ..+.+.+++.++. .+.| +++ ....+.+...+.+..- .-.+...+..
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 468999999999985 3 3567788888872 3544 322 1233444444444321 1111223334
Q ss_pred ---HHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 107 ---ILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 107 ---v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++.|++.. |+++++.+...-...+.|.. +.+.|.++|...
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~i~~l 153 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQV-DDFVLGLLLGSL 153 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCC-CHHHHHHHHHHH
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcC-CHHHHHHHHHHH
Confidence 889999986 99999975322234456888 888899888753
No 156
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=95.32 E-value=0.035 Score=38.00 Aligned_cols=58 Identities=14% Similarity=0.165 Sum_probs=46.4
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+++.+++......+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 3 v~~l~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~ 60 (109)
T 2yzu_A 3 PIEVTDQNFDETLGQH-PLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE 60 (109)
T ss_dssp CEECCTTTHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT
T ss_pred ceEccHhHHHHHhcCC-CeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC
Confidence 5678888888777665 355666888888888889999999999999889888887543
No 157
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=95.31 E-value=0.076 Score=36.75 Aligned_cols=60 Identities=12% Similarity=0.162 Sum_probs=47.1
Q ss_pred CceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
..+.+++.+++.... ..+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 7 ~~v~~l~~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~ 67 (115)
T 1thx_A 7 KGVITITDAEFESEVLKAE-QPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP 67 (115)
T ss_dssp CSEEECCGGGHHHHTTTCS-SCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT
T ss_pred CceEEeeccchhhHhhcCC-ceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC
Confidence 357889998887654 334 455666888888888999999999999999889998887653
No 158
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=95.13 E-value=0.058 Score=36.93 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=33.0
Q ss_pred ecccHHHHHhcCCCCCeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 101 TSTNADILAEYSVDDDTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 101 ~t~~~~v~~~~~v~~p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
...+++++++|++..|+|++ .+ +.. .. |.+ +.+.|.+||...
T Consensus 34 id~~~~l~~~~g~~vPtl~~-~~--G~~-v~-g~~-~~~~L~~~l~~~ 75 (87)
T 1ttz_A 34 IDDDAALESAYGLRVPVLRD-PM--GRE-LD-WPF-DAPRLRAWLDAA 75 (87)
T ss_dssp CTTCHHHHHHHTTTCSEEEC-TT--CCE-EE-SCC-CHHHHHHHHHTC
T ss_pred CCCCHHHHHHhCCCcCeEEE-EC--CEE-Ee-CCC-CHHHHHHHHHHH
Confidence 66788999999998899988 53 323 33 888 899999999764
No 159
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=95.13 E-value=0.12 Score=37.67 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=60.9
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEE-ec-chhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC-
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFD-AS-SELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD- 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~-~~-~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~- 115 (216)
.+++++|.|+..||. ...+.+.+++.++. .+.|. ++ ......+...+.+..- .-.+...+..+++.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 467899999999984 44556777777762 24432 11 1122333333333321 1111333447889999986
Q ss_pred CeEEEEecCCCCcccccCCC-CCHHHHHHHHhhcC
Q psy7942 116 DTVAIFKKFDEGRVNYEGPA-SDEAALRKFLSTQS 149 (216)
Q Consensus 116 p~i~~~~~~de~~~~y~G~~-~~~~~l~~fi~~~~ 149 (216)
|+++++.+...-...+.|.. .+.+.|.++|....
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 99988864222223355632 16789999998764
No 160
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=95.11 E-value=0.059 Score=42.13 Aligned_cols=71 Identities=10% Similarity=-0.019 Sum_probs=51.7
Q ss_pred HHHHHhhcCCCceeeeCcchHHHhhccCCcceEEE-EEe-------CCccchhhhhHHHHHHHHhcc-----CceEEEEc
Q psy7942 141 LRKFLSTQSLPLVVEFNHETAQKIFGGEIKSHLLV-FFS-------KAAGHYESHFEPVQTVAKDFR-----EKEEQDED 207 (216)
Q Consensus 141 l~~fi~~~~~P~v~~~~~~~~~~~~~~~~~~~lll-f~~-------~~~~~~~~~~~~l~~vA~~~r-----~~~~f~~~ 207 (216)
+.+++....-..+.++|.+++..+.......++++ |.. .++..+..+...+.++|++|. +++.|..+
T Consensus 8 ~~~l~~l~~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kv 87 (178)
T 3ga4_A 8 IDDILQLKDDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTV 87 (178)
T ss_dssp CHHHHTTCCTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHhhccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 34455555566799999999998765432333444 555 256677889999999999998 89999888
Q ss_pred CCCC
Q psy7942 208 DDQP 211 (216)
Q Consensus 208 d~~~ 211 (216)
|...
T Consensus 88 D~d~ 91 (178)
T 3ga4_A 88 DVNE 91 (178)
T ss_dssp ETTT
T ss_pred ECcc
Confidence 8754
No 161
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=95.05 E-value=0.046 Score=37.74 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=47.3
Q ss_pred ceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++.... ..+ ++.++.|...+.+....+...+.++++++.+++.|+.+|...
T Consensus 5 ~v~~l~~~~~~~~~~~~~-~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~ 64 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEG-KACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE 64 (111)
T ss_dssp CSEECCHHHHHHHHTTSC-CCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT
T ss_pred cceecCHHHHHHHHHhcC-CEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc
Confidence 46678888888877 444 455667888888888999999999999999989888887643
No 162
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=95.02 E-value=0.14 Score=37.68 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=63.0
Q ss_pred CCCeEEEEEecCCCh---hH-HHHHHHHHhhCC--CceE-Eec-------chhhHHHHhhhhcccc-ceeeecccH----
Q psy7942 45 DSKVVVAGLFKDASS---EL-AKTFNEIASKVD--DLVF-DAS-------SELAKTFNEIASKVDD-LVFVTSTNA---- 105 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~-~~~f~~~A~~~~--~~~F-~~~-------~~~~~~~~~~~~~~~~-~~~~~t~~~---- 105 (216)
..++++|.|+..||. .. .+.+.+++.++. .+.| +++ ......+...+.+..- .-.+...+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 468999999999984 33 667788888873 4544 332 2233444444444321 111122222
Q ss_pred -HHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 106 -DILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 106 -~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+++.|++.. |+++++.+...-...+.|.. +.+.|.++|...
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~i~~l 150 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDV-SELLLGAEIATL 150 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCC-CHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCC-CHHHHHHHHHHH
Confidence 5889999986 99998865222234567888 888888888653
No 163
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=94.91 E-value=0.28 Score=37.25 Aligned_cols=101 Identities=10% Similarity=0.137 Sum_probs=62.5
Q ss_pred CCCeEEEEEecCCChhH---HHHHHHHHhhCCCce-EEec-chhhHHHHhhhhccccc--eeeecccHHHHHhcCCCC-C
Q psy7942 45 DSKVVVAGLFKDASSEL---AKTFNEIASKVDDLV-FDAS-SELAKTFNEIASKVDDL--VFVTSTNADILAEYSVDD-D 116 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~---~~~f~~~A~~~~~~~-F~~~-~~~~~~~~~~~~~~~~~--~~~~t~~~~v~~~~~v~~-p 116 (216)
.+++++|.|+..||... .+.+.+++.+ .+. .+++ +...+.+.+.+.+.+-. ..+...+..+++.|++.. |
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 134 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAP 134 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSC
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCC
Confidence 36788999999998544 4455665554 333 2333 34455555555554321 122445667899999986 9
Q ss_pred eEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 117 TVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 117 ~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+++++-+...-...+.|.. +.+.+.++|...
T Consensus 135 ~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~~ 165 (176)
T 3kh7_A 135 ETYLIDKQGIIRHKIVGVV-DQKVWREQLAPL 165 (176)
T ss_dssp EEEEECTTCBEEEEEESCC-CHHHHHHHTHHH
T ss_pred eEEEECCCCeEEEEEcCCC-CHHHHHHHHHHH
Confidence 8888765222233466888 888888887653
No 164
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=94.90 E-value=0.1 Score=35.74 Aligned_cols=59 Identities=8% Similarity=0.162 Sum_probs=45.5
Q ss_pred ceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++.... ..+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 3 ~v~~l~~~~f~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~ 62 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKAD-GAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 62 (108)
T ss_dssp TEEECCTTTHHHHTTTCS-SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred cceecchhhHHHHHHhcC-CeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 46788888887443 444 455666888888888889999999999999889888877543
No 165
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=94.89 E-value=0.085 Score=35.97 Aligned_cols=59 Identities=10% Similarity=0.092 Sum_probs=45.7
Q ss_pred ceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++.... ..+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 3 ~v~~l~~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 62 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKAS-GLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD 62 (107)
T ss_dssp CEEECCTTTHHHHTTTCS-SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT
T ss_pred ceeecchhhhhHHHHhCC-CEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC
Confidence 46788888887554 333 455666888888888889999999999999889988887653
No 166
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.88 E-value=0.18 Score=45.40 Aligned_cols=115 Identities=12% Similarity=0.136 Sum_probs=77.6
Q ss_pred ccCCCCCChHHHHHHHH---hhhCCCceeecCHHHHHHhHh-CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEe
Q psy7942 7 GERRGGRTAEDIVNWLL---KKTGPPAKEFTSVDEIKAFIA-DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDA 79 (216)
Q Consensus 7 ~~Y~G~Rta~~iv~~l~---~~~~~~v~~l~s~~~~~~~~~-~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~ 79 (216)
+.|.|-..-.++-.++. ...+.+. .+ +.+.++.+.+ +.++.++.|+.+||. ...+.+.++|..++++.|.
T Consensus 76 i~f~g~p~g~e~~s~~~~l~~~~~~~~-~~-~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~~v~~~- 152 (521)
T 1hyu_A 76 PRFAGSPLGHEFTSLVLALLWTGGHPS-KE-AQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNPRIKHT- 152 (521)
T ss_dssp CEEESCCCGGGHHHHHHHHHHHTTCCC-CS-CHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCTTEEEE-
T ss_pred EEEeccCcchhHHHHHHHHHhhcCCCC-CC-CHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcCceEEE-
Confidence 56666555555555554 4445543 33 3455555543 466777888899984 4456788888888778877
Q ss_pred cchhhHHHHhhhhccccceeeecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 80 SSELAKTFNEIASKVDDLVFVTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+| ....++++++|++.. |++++ + + .....|.. ..+.|.+|+...
T Consensus 153 -------------~vd-----~~~~~~~~~~~~i~svPt~~i--~--g-~~~~~G~~-~~~~l~~~l~~~ 198 (521)
T 1hyu_A 153 -------------AID-----GGTFQNEITERNVMGVPAVFV--N--G-KEFGQGRM-TLTEIVAKVDTG 198 (521)
T ss_dssp -------------EEE-----TTTCHHHHHHTTCCSSSEEEE--T--T-EEEEESCC-CHHHHHHHHCCS
T ss_pred -------------EEe-----chhhHHHHHHhCCCccCEEEE--C--C-EEEecCCC-CHHHHHHHHhhc
Confidence 344 556789999999976 99977 2 2 33456887 899999998765
No 167
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=94.85 E-value=0.054 Score=36.58 Aligned_cols=57 Identities=7% Similarity=0.163 Sum_probs=44.6
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
|.+++.+++......+ ++.++.|...+.+........+.++++++.+ +.++.+|...
T Consensus 1 V~~l~~~~~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~ 57 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASH-EIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDE 57 (104)
T ss_dssp CEECCTTTHHHHHHHS-SEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT
T ss_pred CeecCHHHHHHHHhcC-CcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCC
Confidence 4578888888777655 3456668877778888899999999999988 8888887543
No 168
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=94.81 E-value=0.08 Score=35.97 Aligned_cols=59 Identities=12% Similarity=0.120 Sum_probs=44.6
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+..++.+++.......-++.++.|...+.+........+.++++++++++.++.+|...
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 60 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDE 60 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcc
Confidence 45678888877543322455666888888888889999999999999888888877543
No 169
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=94.77 E-value=0.071 Score=36.32 Aligned_cols=58 Identities=16% Similarity=0.199 Sum_probs=46.4
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++.... .+ ++.++.|...+.+........+.++++++++++.|+.+|...
T Consensus 4 ~v~~l~~~~~~~~~-~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 61 (106)
T 3die_A 4 AIVKVTDADFDSKV-ES-GVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDE 61 (106)
T ss_dssp CCEECCTTTHHHHS-CS-SEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred ceEECCHHHHHHHh-cC-CcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCc
Confidence 46788998888777 33 355666888888888899999999999999988888877543
No 170
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.76 E-value=0.083 Score=37.69 Aligned_cols=59 Identities=12% Similarity=0.176 Sum_probs=46.2
Q ss_pred CceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 151 PLVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 151 P~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+.+++.+++.... ..+ ++.++.|...+++........+.++++++++++.|+.+|..
T Consensus 17 ~~v~~l~~~~f~~~~~~~~-~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~ 76 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSD-GLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD 76 (130)
T ss_dssp SSSEECCTTTHHHHTTTCS-SCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETT
T ss_pred CCcEECCHHHHHHHHhcCC-CeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCC
Confidence 357788888887743 444 45566788888888899999999999999988888877754
No 171
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.76 E-value=0.66 Score=41.72 Aligned_cols=93 Identities=8% Similarity=0.042 Sum_probs=65.7
Q ss_pred CCeEEEEecCCCCcccccCCCCCHHHHHHHHhh----cCCCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHH
Q psy7942 115 DDTVAIFKKFDEGRVNYEGPASDEAALRKFLST----QSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEP 190 (216)
Q Consensus 115 ~p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~----~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~ 190 (216)
.|++.+.++.....+.|.|-. --.++..||.. ...| ..++.+....+-....+..+.+|...+++.+......
T Consensus 62 ~p~~~~~~~~~~~~i~f~g~p-~g~e~~s~~~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~ 138 (521)
T 1hyu_A 62 KPSFLITNPGSQQGPRFAGSP-LGHEFTSLVLALLWTGGHP--SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQA 138 (521)
T ss_dssp SSEEEEECTTCCCSCEEESCC-CGGGHHHHHHHHHHHTTCC--CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHH
T ss_pred CCEEEEecCCCcceEEEeccC-cchhHHHHHHHHHhhcCCC--CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHH
Confidence 499999986555568899865 44445555543 3333 5677777777754333345667888888888999999
Q ss_pred HHHHHHhccCceEEEEcCCCC
Q psy7942 191 VQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 191 l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.++|.++. ++.+..+|...
T Consensus 139 l~~~a~~~~-~v~~~~vd~~~ 158 (521)
T 1hyu_A 139 LNLMAVLNP-RIKHTAIDGGT 158 (521)
T ss_dssp HHHHHHHCT-TEEEEEEETTT
T ss_pred HHHHHhHcC-ceEEEEEechh
Confidence 999999987 78887777543
No 172
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=94.71 E-value=0.11 Score=36.25 Aligned_cols=57 Identities=12% Similarity=0.092 Sum_probs=45.0
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+++.+++.... .+ ++.++.|...+.+........+.++++++++++.|+.+|...
T Consensus 3 v~~l~~~~~~~~~-~~-~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~ 59 (112)
T 2voc_A 3 IVKATDQSFSAET-SE-GVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE 59 (112)
T ss_dssp CEECCTTTHHHHH-SS-SEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred eEEecHHHHHHHh-CC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC
Confidence 5678888887766 44 345666888888888899999999999999888888887543
No 173
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=94.66 E-value=0.14 Score=37.48 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=57.9
Q ss_pred CCCeEEEEEecCCChhH---HHHHHHHHhhCCCceEE-ec-chhhHHHHhhhhcccc-ce-eeecccHHHHHhcCCCC-C
Q psy7942 45 DSKVVVAGLFKDASSEL---AKTFNEIASKVDDLVFD-AS-SELAKTFNEIASKVDD-LV-FVTSTNADILAEYSVDD-D 116 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~---~~~f~~~A~~~~~~~F~-~~-~~~~~~~~~~~~~~~~-~~-~~~t~~~~v~~~~~v~~-p 116 (216)
.+++++|.|+.+||... .+.+.+++.+ +++.|. ++ ......+.+.+.+.+- .. .....+..+++.|++.. |
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P 119 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVP 119 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSC
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccC
Confidence 36788889999998544 4455555544 445543 11 1222333333333211 00 11334567889999986 9
Q ss_pred eEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 117 TVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 117 ~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++++-+...-...+.|.. +.+.|.++|..
T Consensus 120 ~~~~id~~G~i~~~~~g~~-~~~~l~~~l~~ 149 (156)
T 1kng_A 120 ETFVVGREGTIVYKLVGPI-TPDNLRSVLLP 149 (156)
T ss_dssp EEEEECTTSBEEEEEESCC-CHHHHHHTHHH
T ss_pred eEEEEcCCCCEEEEEeCCC-CHHHHHHHHHH
Confidence 7777754222233467887 88888888765
No 174
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=94.56 E-value=0.075 Score=36.40 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=44.2
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++.+++.......-++.++.|...+.+........+.++++++.+++.++.+|..
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~ 60 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD 60 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC
Confidence 5678888887654332245566688888888888999999999999988888888754
No 175
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=94.38 E-value=0.11 Score=36.28 Aligned_cols=62 Identities=10% Similarity=0.092 Sum_probs=46.7
Q ss_pred CCCceeeeCcchHHHh-hccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 149 SLPLVVEFNHETAQKI-FGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~-~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
....+.+++.+++... ...+ ++.++.|...+++........+.++++++.+++.|+.+|...
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 72 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSN-KPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDT 72 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred hcccceecCHHHHHHHHHhCC-CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 3456788888888754 3444 455667888888888899999999999999889888887643
No 176
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=94.36 E-value=0.071 Score=44.92 Aligned_cols=85 Identities=13% Similarity=0.019 Sum_probs=52.0
Q ss_pred HHHHHHhHhCCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeee-cccHHHHHhc
Q psy7942 36 VDEIKAFIADSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVT-STNADILAEY 111 (216)
Q Consensus 36 ~~~~~~~~~~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~-t~~~~v~~~~ 111 (216)
...+.+.+++..+ |.|+.+||. ...+.|.++|++++.+.+. .+| . ..++++++++
T Consensus 189 ~~~la~~l~~~~v--V~F~A~WC~~Ck~l~p~le~lA~~l~~Vd~d--------------~~d-----~~~~~~~la~~~ 247 (291)
T 3kp9_A 189 AVGLAAHLRQIGG--TMYGAYWCPHCQDQKELFGAAFDQVPYVECS--------------PNG-----PGTPQAQECTEA 247 (291)
T ss_dssp HHHHHHHHHHTTC--EEEECTTCHHHHHHHHHHGGGGGGSCEEESC--------------SSC-----SSSCCCHHHHTT
T ss_pred HHHHHHHhCCCCE--EEEECCCCHHHHHHHHHHHHHHHHcCEEEEe--------------ecC-----chhhHHHHHHHc
Confidence 3455555655554 557888873 3445666655544211111 000 1 2267899999
Q ss_pred CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 112 SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 112 ~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++.. |++.+ + +. .|.|.. +.++|.+|+.-.
T Consensus 248 gI~~vPT~~i--~--G~--~~~G~~-~~~~L~~~l~~~ 278 (291)
T 3kp9_A 248 GITSYPTWII--N--GR--TYTGVR-SLEALAVASGYP 278 (291)
T ss_dssp TCCSTTEEEE--T--TE--EEESCC-CHHHHHHHTCCC
T ss_pred CCcccCeEEE--C--CE--EecCCC-CHHHHHHHHCCC
Confidence 9986 99655 3 22 399998 999999998643
No 177
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=94.34 E-value=0.3 Score=36.95 Aligned_cols=102 Identities=6% Similarity=0.006 Sum_probs=56.7
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCc------eEE-ec-ch-hhHHHHhhhhcccc-ceeeecccHHHHH
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDL------VFD-AS-SE-LAKTFNEIASKVDD-LVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~------~F~-~~-~~-~~~~~~~~~~~~~~-~~~~~t~~~~v~~ 109 (216)
..++++|.|+..||. ...+.+.+++.++ ..+ .|. ++ +. ..+.+.+.+.+.+- ...+...+..+..
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 468899999999984 4456777777776 224 442 21 11 23334443333321 1111223334444
Q ss_pred hc---CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 110 EY---SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 110 ~~---~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
.| ++.. |+++++.+...-...|.|.. +.+.|.++|..
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~ 178 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREV-TSKDVLDVALP 178 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCC-CHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCC-CHHHHHHHHHH
Confidence 44 3554 98777764223234567888 88999998875
No 178
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=94.27 E-value=0.1 Score=38.13 Aligned_cols=60 Identities=15% Similarity=0.181 Sum_probs=48.0
Q ss_pred CceeeeCcchHH-HhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQ-KIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~-~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+.+++.+++. .+...+ ++.++.|+..+++.+..+...+.++++++.+++.|+.+|...
T Consensus 6 ~~v~~l~~~~f~~~~~~~~-~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~ 66 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSK-KPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT 66 (140)
T ss_dssp TTEEEECHHHHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT
T ss_pred cceEEcchHhHHHHHHhCC-CcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc
Confidence 568889998888 454444 455667888888888999999999999999999998887643
No 179
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=94.22 E-value=0.18 Score=37.56 Aligned_cols=101 Identities=6% Similarity=0.054 Sum_probs=57.3
Q ss_pred hCCCeEEEEEecCCChhH---HHHHHHHHhhCCCceE-Eec-chhhHHHHhhhhcccc-c-eeeecccHHHHHhcCCCC-
Q psy7942 44 ADSKVVVAGLFKDASSEL---AKTFNEIASKVDDLVF-DAS-SELAKTFNEIASKVDD-L-VFVTSTNADILAEYSVDD- 115 (216)
Q Consensus 44 ~~~~v~~V~f~~~~~~~~---~~~f~~~A~~~~~~~F-~~~-~~~~~~~~~~~~~~~~-~-~~~~t~~~~v~~~~~v~~- 115 (216)
..+++++|.|+.+||... .+.+.+++.+ ++.| +++ ....+.+...+.+.+- . ......+..+++.|++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 126 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGA 126 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCcccc
Confidence 357788999999998543 4566666654 3332 221 1222223333322211 0 111334567889999986
Q ss_pred CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 116 DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 116 p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
|+.+++.+...-...+.|.. +.+.|.++|..
T Consensus 127 P~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~ 157 (168)
T 2b1k_A 127 PETFLIDGNGIIRYRHAGDL-NPRVWEEEIKP 157 (168)
T ss_dssp SEEEEECTTSBEEEEEESCC-CHHHHHHTTHH
T ss_pred CEEEEECCCCeEEEEEeCCC-CHHHHHHHHHH
Confidence 97666654222233467887 88888888765
No 180
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=94.22 E-value=0.27 Score=35.81 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=59.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEE-e--cchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFD-A--SSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVDD 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~-~--~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~~ 115 (216)
.+++++|.|+..||. ...+.+.+++.++. .+.|. + ..+....+.+.+.+..- .-++...+..+++.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 567899999999984 44567778887773 34432 1 11113333333333321 1111334456889999986
Q ss_pred -CeEEEEecCCCCcccccCCC-CCHHHHHHHHhhc
Q psy7942 116 -DTVAIFKKFDEGRVNYEGPA-SDEAALRKFLSTQ 148 (216)
Q Consensus 116 -p~i~~~~~~de~~~~y~G~~-~~~~~l~~fi~~~ 148 (216)
|+++++.+...-...+.|.. .+.+.+.++|...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHH
Confidence 98777754222223345643 1567899988764
No 181
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=94.09 E-value=0.082 Score=37.14 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=46.3
Q ss_pred CceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccC-----ceEEEEcCCC
Q psy7942 151 PLVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFRE-----KEEQDEDDDQ 210 (216)
Q Consensus 151 P~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~-----~~~f~~~d~~ 210 (216)
+.+..++.+++.... ..+ ++.++.|+..++.....+...+.++|+++++ ++.|+.+|..
T Consensus 7 ~~v~~l~~~~f~~~v~~~~-~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~ 71 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDT-KDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDAT 71 (121)
T ss_dssp CSSEECCTTTTTTSSSCTT-SCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETT
T ss_pred CCeEEecccCHHHHhhcCC-CCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECc
Confidence 457788888887664 333 4556668888888889999999999999987 7888888754
No 182
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=94.08 E-value=0.44 Score=35.23 Aligned_cols=101 Identities=14% Similarity=0.289 Sum_probs=61.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCCCceEE-e-cc------------------hhhHHHHhhhhccc--ccee
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVDDLVFD-A-SS------------------ELAKTFNEIASKVD--DLVF 99 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~-~-~~------------------~~~~~~~~~~~~~~--~~~~ 99 (216)
..++++|.|+..||. ...+.+.+++.++.++.|. + +. +....+...+.+.. ..-.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIM 115 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeE
Confidence 468899999999884 4556777777777555442 1 11 23333333333332 1211
Q ss_pred eecccHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 100 VTSTNADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 100 ~~t~~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+.. +.++.+.|++.. |+++++.+ ++.+.+.|...+.+.|.++|...
T Consensus 116 ~~d-~~~~~~~~~v~~~P~~~lid~--~G~i~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 116 VMD-DGSLVEKFNVRSIDYIVIMDK--SSNVLYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEC-CSHHHHHTTCCSSSEEEEEET--TCCEEEEEESCCHHHHHHHHHHC
T ss_pred EeC-hHHHHHHhCCCCceEEEEEcC--CCcEEEeCCCCCHHHHHHHHHHH
Confidence 122 567899999986 99999975 23444455432678888888753
No 183
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=94.05 E-value=0.12 Score=36.52 Aligned_cols=62 Identities=10% Similarity=-0.026 Sum_probs=47.4
Q ss_pred CCCceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 149 SLPLVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.-+.+..++.+++.... ..+ ++.++.|...+++.+......|.++++++.+++.|+.+|...
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~-k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~ 73 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSE-TPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD 73 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTT
T ss_pred CceEEEecChhhHHHHHHcCC-CcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCC
Confidence 34567788888887644 444 455666888888888889999999999999889888887643
No 184
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.01 E-value=0.13 Score=37.04 Aligned_cols=101 Identities=7% Similarity=0.001 Sum_probs=55.2
Q ss_pred CCCeEEEEEecCCC---hhHHHHHHHHHhhCC--CceEE-e-cchhhHHHHhhhhcccc--ceeeecccHH--HHHhcCC
Q psy7942 45 DSKVVVAGLFKDAS---SELAKTFNEIASKVD--DLVFD-A-SSELAKTFNEIASKVDD--LVFVTSTNAD--ILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~---~~~~~~f~~~A~~~~--~~~F~-~-~~~~~~~~~~~~~~~~~--~~~~~t~~~~--v~~~~~v 113 (216)
.+++++|.|+.+|| ....+.+.+++.++. .+.|. + ++.....+.+.+.+.+- ...+...+.. +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 46788999998876 456777888887762 25443 1 12222333333333321 1111112222 8889999
Q ss_pred CC-CeEEEEecCCCCcccccCCCCCHHHHHHHHh
Q psy7942 114 DD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLS 146 (216)
Q Consensus 114 ~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~ 146 (216)
.. |+++++.+...-...+.|.. +.+.+.+.+.
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~-~~~~~l~~l~ 142 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYE-NLDDFLVQYE 142 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGG-GHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHH-HHHHHHHHHH
Confidence 86 99999964222223345554 5555555543
No 185
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=93.94 E-value=0.14 Score=35.34 Aligned_cols=59 Identities=12% Similarity=0.228 Sum_probs=44.9
Q ss_pred ceeeeCcchHHH-hhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQK-IFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~-~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+..++.+++.. +...+ ++.++.|...+.+........+.++++++.+++.++.+|...
T Consensus 6 ~v~~l~~~~~~~~~~~~~-~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~ 65 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKND-KPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE 65 (112)
T ss_dssp CCEEECTTTHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred eEEecchhhHHHHHhhCC-CeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC
Confidence 467888888765 33444 455666888888888889999999999998888888887543
No 186
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=93.92 E-value=0.17 Score=36.46 Aligned_cols=59 Identities=8% Similarity=0.163 Sum_probs=45.1
Q ss_pred ceeeeCcchHHHh-hccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKI-FGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~-~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
-+.+++.+++... ...+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 23 ~v~~l~~~~f~~~~~~~~-k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~ 82 (128)
T 2o8v_B 23 KIIHLTDDSFDTDVLKAD-GAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ 82 (128)
T ss_dssp CSEEECTTTHHHHTTTCS-SEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred ccEecChhhHHHHHHhcC-CEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC
Confidence 3678888888754 3444 445666888888888899999999999999889888877543
No 187
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=93.91 E-value=0.11 Score=36.49 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=46.1
Q ss_pred ceeeeCcchHH-HhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQ-KIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~-~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++. .+...+ ++.++.|...+++.+......+.++++++.+++.|+.+|...
T Consensus 4 ~v~~l~~~~f~~~~~~~~-~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~ 63 (122)
T 3aps_A 4 ASIDLTPQTFNEKVLQGK-THWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA 63 (122)
T ss_dssp CSEECCHHHHHHHTTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred chhcCCHHHHHHHHhcCC-CeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC
Confidence 46788888884 455554 455666888888888899999999999999899998888643
No 188
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=93.90 E-value=0.1 Score=42.79 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred CCCceeeeCcchHHHhhccC-CcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 149 SLPLVVEFNHETAQKIFGGE-IKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~~~~-~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
..+.|.++|.+++..+.... -++.++.|+.++++.+......+.++++++.+++.|+.+|...
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~ 68 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA 68 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc
Confidence 35679999999998877642 2344556888888889999999999999999999888887643
No 189
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=93.87 E-value=0.14 Score=34.69 Aligned_cols=58 Identities=14% Similarity=0.094 Sum_probs=43.5
Q ss_pred eeeeCc-chHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFNH-ETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~-~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++. +++...... .-++.++.|...+.+........+.++++++++++.|+.+|..
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~ 61 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD 61 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc
Confidence 456776 677766652 2234566688888888888999999999999888988888754
No 190
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=93.86 E-value=0.14 Score=37.09 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=44.6
Q ss_pred CCceeeeCcchHHHhhcc-----------CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 150 LPLVVEFNHETAQKIFGG-----------EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~-----------~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
-+.+..++.+++...... .-++.++.|+..+++.+......+.+++++|.+++.|+.+|...
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~ 93 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK 93 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC
Confidence 345666666666554443 11355666888888888999999999999999999888887643
No 191
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=93.71 E-value=0.33 Score=35.49 Aligned_cols=99 Identities=10% Similarity=0.142 Sum_probs=55.3
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceEE-e-cchhhHHHHhhhhcccc-ceeeecc---cHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVFD-A-SSELAKTFNEIASKVDD-LVFVTST---NADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F~-~-~~~~~~~~~~~~~~~~~-~~~~~t~---~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.+++.++. .+.|. + ++...+.+.+.+.+..- ...+... +..+++.|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 467899999999984 44566777777762 35442 1 12223344443333221 1111222 4678899999
Q ss_pred CC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 114 DD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 114 ~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
.. |+++++.+ ++.+.+.. . +.+.|.++|..
T Consensus 108 ~~~P~~~lid~--~G~i~~~~-~-~~~~l~~~l~~ 138 (152)
T 2lrn_A 108 VGFPHIILVDP--EGKIVAKE-L-RGDDLYNTVEK 138 (152)
T ss_dssp CSSCEEEEECT--TSEEEEEC-C-CTTHHHHHHHH
T ss_pred CcCCeEEEECC--CCeEEEee-C-CHHHHHHHHHH
Confidence 86 99999854 23344332 2 33456666654
No 192
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.51 E-value=0.13 Score=36.58 Aligned_cols=60 Identities=17% Similarity=0.216 Sum_probs=46.5
Q ss_pred CceeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhcc----CceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFR----EKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r----~~~~f~~~d~~~ 211 (216)
..+.+++.+++.... ..+ ++.++.|...++..+......+.++++++. +++.|+.+|...
T Consensus 7 ~~v~~l~~~~~~~~~~~~~-~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 71 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVLDSE-DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV 71 (133)
T ss_dssp CSCEECCTTHHHHHTTTSS-SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT
T ss_pred CcCEEcCHhhHHHHHhcCC-CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC
Confidence 457788988888755 333 455666888888888889999999999998 789998887643
No 193
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=93.43 E-value=0.1 Score=39.45 Aligned_cols=78 Identities=8% Similarity=-0.014 Sum_probs=43.3
Q ss_pred HHHHHhHhCCCeEEEEEecCCChhH---HHHHHHH---HhhCC-CceEEecchhhHHHHhhhhccccceeeecccHHHHH
Q psy7942 37 DEIKAFIADSKVVVAGLFKDASSEL---AKTFNEI---ASKVD-DLVFDASSELAKTFNEIASKVDDLVFVTSTNADILA 109 (216)
Q Consensus 37 ~~~~~~~~~~~v~~V~f~~~~~~~~---~~~f~~~---A~~~~-~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~~~v~~ 109 (216)
+.++...+++++++|-|+++||... .+.+.+. ..... ++... .+| ....+++.
T Consensus 35 ~al~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V--------------~vD------~e~~~~~~ 94 (151)
T 3ph9_A 35 EGLFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIML--------------NLM------HETTDKNL 94 (151)
T ss_dssp HHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEE--------------EES------SCCSCGGG
T ss_pred HHHHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEE--------------Eec------CCchhhHh
Confidence 3455566678999999999999543 3344332 11111 22222 111 11234567
Q ss_pred hcCCCC-CeEEEEecCCCCcccccCC
Q psy7942 110 EYSVDD-DTVAIFKKFDEGRVNYEGP 134 (216)
Q Consensus 110 ~~~v~~-p~i~~~~~~de~~~~y~G~ 134 (216)
.+++.+ |++++|.+..+......|.
T Consensus 95 ~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 95 SPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp CTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred hcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 788876 9999998533323334454
No 194
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=93.42 E-value=0.12 Score=37.24 Aligned_cols=59 Identities=15% Similarity=0.231 Sum_probs=46.9
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCc---eEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREK---EEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~---~~f~~~d~~~ 211 (216)
.+..++.+++......+ +..++.|+..++..+..+...+.+++++++++ +.|+.+|...
T Consensus 18 ~v~~l~~~~~~~~~~~~-~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~ 79 (140)
T 2dj1_A 18 GVWVLNDGNFDNFVADK-DTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS 79 (140)
T ss_dssp TEEECCTTTHHHHHTTC-SEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT
T ss_pred CCEEcChHhHHHHHhcC-CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc
Confidence 47788888888877655 44566688888888888999999999999876 8998888653
No 195
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=93.22 E-value=0.18 Score=36.96 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=47.7
Q ss_pred CceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
..+..++.+++......+ ++.++.|...+......+...+.++++++.+++.|+.+|...
T Consensus 38 ~~v~~l~~~~~~~~~~~~-k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~ 97 (148)
T 3p2a_A 38 GEVINATAETLDKLLQDD-LPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA 97 (148)
T ss_dssp CCCEECCTTTHHHHTTCS-SCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred CCceecCHHHHHHHHhcC-CcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC
Confidence 346788888888777554 455666888888888889999999999999999998887643
No 196
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=93.13 E-value=0.2 Score=36.23 Aligned_cols=59 Identities=12% Similarity=0.112 Sum_probs=44.7
Q ss_pred ceeeeCcchHHHhhcc-----------CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 152 LVVEFNHETAQKIFGG-----------EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~-----------~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+.+++.+++...... +-++.++.|...+++.+......+.++++++++++.|+.+|..
T Consensus 10 ~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~ 79 (136)
T 2l5l_A 10 KVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTE 79 (136)
T ss_dssp SEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETT
T ss_pred ceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4677788777665442 1134566688888888889999999999999988988887754
No 197
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=93.01 E-value=0.33 Score=33.40 Aligned_cols=60 Identities=18% Similarity=0.140 Sum_probs=46.2
Q ss_pred CCceeeeCcchHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
...+..++.+++...... .-++.++.|...+.+........+.++++++++ +.|+.+|..
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~ 64 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCN 64 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECS
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecC
Confidence 345788999888877763 223556668888888888899999999999985 888888764
No 198
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=92.96 E-value=0.11 Score=37.22 Aligned_cols=61 Identities=16% Similarity=0.126 Sum_probs=46.4
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhcc--CceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFR--EKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r--~~~~f~~~d~~ 210 (216)
-+.+..++.+++.......-++.++.|...+++.+......|.+++++++ +++.|+.+|..
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~ 68 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT 68 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC
Confidence 45678888888776554322345666888888888999999999999998 56899888864
No 199
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.94 E-value=0.21 Score=36.15 Aligned_cols=62 Identities=11% Similarity=0.124 Sum_probs=48.1
Q ss_pred CCceeeeCcchHHHhhccCCc-ceEEEEEeCCccchhhhhHHHHHHHHhccC-ceEEEEcCCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIK-SHLLVFFSKAAGHYESHFEPVQTVAKDFRE-KEEQDEDDDQP 211 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~-~~lllf~~~~~~~~~~~~~~l~~vA~~~r~-~~~f~~~d~~~ 211 (216)
...+.+++.+++......... +.++.|...+++.+......+.++|++|++ ++.|+.+|...
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~ 69 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR 69 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc
Confidence 345778899888876665422 345568888888888999999999999997 79999988643
No 200
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=92.90 E-value=0.19 Score=34.71 Aligned_cols=59 Identities=14% Similarity=0.188 Sum_probs=46.3
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccC---ceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFRE---KEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~---~~~f~~~d~~~ 211 (216)
.+.+++.+++......+ ++.++.|...+++.+..+...+.++++++++ ++.|+.+|...
T Consensus 8 ~v~~l~~~~~~~~~~~~-~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~ 69 (120)
T 1mek_A 8 HVLVLRKSNFAEALAAH-KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE 69 (120)
T ss_dssp TEEECCTTTHHHHHHHC-SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT
T ss_pred CcEEechhhHHHHHccC-CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC
Confidence 46788988988877765 4556668888888888999999999999874 57888777654
No 201
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=92.86 E-value=0.84 Score=32.58 Aligned_cols=99 Identities=9% Similarity=0.103 Sum_probs=59.6
Q ss_pred CCCeEEEEEecCCC---hhHHHHHHHHHhhC-CC--ceEE-e-cchhhHHHHhhhhcccc-ceeeecc---cHHHHHhcC
Q psy7942 45 DSKVVVAGLFKDAS---SELAKTFNEIASKV-DD--LVFD-A-SSELAKTFNEIASKVDD-LVFVTST---NADILAEYS 112 (216)
Q Consensus 45 ~~~v~~V~f~~~~~---~~~~~~f~~~A~~~-~~--~~F~-~-~~~~~~~~~~~~~~~~~-~~~~~t~---~~~v~~~~~ 112 (216)
.+++++|.|+.+|| ....+.+.+++.++ .+ +.|. + ++.....|.+.+...+- ...+... +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 56789999998876 56677888888887 43 4442 1 12223344444433321 1111111 457899999
Q ss_pred CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 113 VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 113 v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+.. |+++++.+ ++.+.+... +.+.|.++|..
T Consensus 112 v~~~P~~~lid~--~G~i~~~~~--~~~~l~~~l~~ 143 (148)
T 3fkf_A 112 ILTLPTNILLSP--TGKILARDI--QGEALTGKLKE 143 (148)
T ss_dssp CCSSSEEEEECT--TSBEEEESC--CHHHHHHHHHH
T ss_pred CCCcCEEEEECC--CCeEEEecC--CHHHHHHHHHH
Confidence 986 99999964 234444332 66778887765
No 202
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=92.81 E-value=0.71 Score=34.84 Aligned_cols=87 Identities=10% Similarity=0.160 Sum_probs=51.5
Q ss_pred HHhHhCCCeEEEEEecCCChhH--HH--HH--HHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec--ccHHHHHh
Q psy7942 40 KAFIADSKVVVAGLFKDASSEL--AK--TF--NEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS--TNADILAE 110 (216)
Q Consensus 40 ~~~~~~~~v~~V~f~~~~~~~~--~~--~f--~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~ 110 (216)
....+.++.++|.|+.+||... ++ .| .+|+..+ .++.+. ++| .. ....+.++
T Consensus 36 ~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v--------------~~d-----~~~~~~~~l~~~ 96 (153)
T 2dlx_A 36 ECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFW--------------QVY-----HDSEEGQRYIQF 96 (153)
T ss_dssp HHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEE--------------EEE-----SSSHHHHHHHHH
T ss_pred HHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEE--------------EEe-----cCCHhHHHHHHH
Confidence 3444568999999999998322 21 22 2333333 344443 232 21 23457889
Q ss_pred cCCCC-CeEEEEecC-CCCcccccCCCCCHHHHHHHHhh
Q psy7942 111 YSVDD-DTVAIFKKF-DEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 111 ~~v~~-p~i~~~~~~-de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
|++.+ |+++++.+. .+....+.| . +.+.+..++..
T Consensus 97 y~v~~~P~~~fld~~~G~~l~~~~g-~-~~~~fl~~L~~ 133 (153)
T 2dlx_A 97 YKLGDFPYVSILDPRTGQKLVEWHQ-L-DVSSFLDQVTG 133 (153)
T ss_dssp HTCCSSSEEEEECTTTCCCCEEESS-C-CHHHHHHHHHH
T ss_pred cCCCCCCEEEEEeCCCCcEeeecCC-C-CHHHHHHHHHH
Confidence 99986 999999864 223333556 6 88877776654
No 203
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=92.68 E-value=0.2 Score=37.50 Aligned_cols=58 Identities=14% Similarity=0.120 Sum_probs=45.7
Q ss_pred eeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+++.+++......+ ++.++.|+..+.+....+...+.++|++|.+++.|+.+|...
T Consensus 49 ~~~l~~~~f~~~~~~~-~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~ 106 (155)
T 2ppt_A 49 VAGIDPAILARAERDD-LPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA 106 (155)
T ss_dssp EEECCHHHHHHHTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CccCCHHHHHHHHhCC-CcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc
Confidence 6678888887766444 345666888887778889999999999999889998887643
No 204
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=92.65 E-value=0.27 Score=35.00 Aligned_cols=62 Identities=15% Similarity=0.094 Sum_probs=47.0
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhcc-----CceEEEEcCCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFR-----EKEEQDEDDDQP 211 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r-----~~~~f~~~d~~~ 211 (216)
-+.+.+++.+++.......-+..++.|+..++..+......+.++|+++. +++.|+.+|...
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~ 80 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK 80 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc
Confidence 34688999999987764322455666888888888999999999998764 568888887653
No 205
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=92.62 E-value=0.23 Score=34.09 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=43.6
Q ss_pred eeee-CcchHHHhhcc----CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEF-NHETAQKIFGG----EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~-~~~~~~~~~~~----~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.++ +.+++...... + ++.++.|...+.+........+.+++++|.+++.|+.+|...
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~-~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 66 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEH-KPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 66 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHT-CCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT
T ss_pred EEEecCHHHHHHHHHhhcccC-CeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 5566 35677666653 4 355667888888888889999999999999888888887643
No 206
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=92.60 E-value=0.34 Score=34.82 Aligned_cols=59 Identities=5% Similarity=-0.039 Sum_probs=42.9
Q ss_pred CCceeeeCcchHHHhhccCCc--ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIK--SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~--~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+..+.+++.+++........+ +.++-|+..+.+....+...|.++|++|. ++.|+.+|.
T Consensus 2 ~G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~ 62 (118)
T 3evi_A 2 FGELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIV 62 (118)
T ss_dssp CCSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEG
T ss_pred CcceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEh
Confidence 456788888888764443212 33444888888888899999999999997 477777664
No 207
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=92.35 E-value=0.32 Score=34.05 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=45.4
Q ss_pred CCCceeeeCcchHHHhhcc---CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 149 SLPLVVEFNHETAQKIFGG---EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~~~---~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
..|.+...+.+++...... .-++.++.|...+.+........+.+++++|.+ +.|+.+|...
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~ 75 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDE 75 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTT
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCC
Confidence 3456677787777766543 224556668888888888899999999999987 8888877543
No 208
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=92.34 E-value=0.42 Score=34.46 Aligned_cols=98 Identities=9% Similarity=0.069 Sum_probs=57.9
Q ss_pred CCeEEEEEecCCChhH---HHHHHH---HHhhC--CCceE-Eec-chhhHHHHhhhhccccc-eeeecccH--HHHHhcC
Q psy7942 46 SKVVVAGLFKDASSEL---AKTFNE---IASKV--DDLVF-DAS-SELAKTFNEIASKVDDL-VFVTSTNA--DILAEYS 112 (216)
Q Consensus 46 ~~v~~V~f~~~~~~~~---~~~f~~---~A~~~--~~~~F-~~~-~~~~~~~~~~~~~~~~~-~~~~t~~~--~v~~~~~ 112 (216)
.++++|.|+.+||... .+.+.+ +..++ ..+.+ +++ +.....|.+.+....-. ......+. .+.+.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5889999999998544 445666 55555 34443 222 23345566555554321 11111111 2577889
Q ss_pred CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 113 VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 113 v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+.. |+++++.+ ++.+.+.+ . ..+.|.+||++
T Consensus 111 v~~~P~~~lid~--~G~i~~~~-~-~~~~l~~~l~e 142 (142)
T 3eur_A 111 LRAIPTLYLLDK--NKTVLLKD-A-TLQKVEQYLAE 142 (142)
T ss_dssp CTTCSEEEEECT--TCBEEEEE-E-CHHHHHHHHHC
T ss_pred CCcCCeEEEECC--CCcEEecC-C-CHHHHHHHHhC
Confidence 876 99999974 34556543 3 67889998863
No 209
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=92.31 E-value=0.19 Score=35.36 Aligned_cols=59 Identities=12% Similarity=0.021 Sum_probs=44.6
Q ss_pred CCceeeeCcchHHHhhc--cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFG--GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~--~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+.....+.+++..++. .+ ++.++.|...+.+........+.+++++|.+ +.|+.+|..
T Consensus 11 ~~~~~~~t~~~f~~~l~~~~~-k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d 71 (116)
T 3qfa_C 11 GSVKQIESKTAFQEALDAAGD-KLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD 71 (116)
T ss_dssp -CCBCCCCHHHHHHHHHHHTT-SCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT
T ss_pred CcccCCCCHHHHHHHHHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC
Confidence 34555667777777766 34 3456668888888888999999999999987 888887764
No 210
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=92.29 E-value=0.43 Score=41.11 Aligned_cols=102 Identities=10% Similarity=0.038 Sum_probs=63.3
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceE-Eec------chhhHHHHhhhhcccc-ceeeecccHHHHHhc
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVF-DAS------SELAKTFNEIASKVDD-LVFVTSTNADILAEY 111 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F-~~~------~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~ 111 (216)
..++++|.|+.+||. ...+.+.++++++. .+.| +++ ....+.+.+.+.+..- .-++...+..+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 367899999999985 44567777777762 3443 322 1223444444444332 111133456789999
Q ss_pred CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 112 SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 112 ~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
++.. |+++++-+...-...+.|.. +.+.|.++|..
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~-~~~~l~~~I~~ 196 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEG-DYNVTETLVRQ 196 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBC-CHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCC-CHHHHHHHHHH
Confidence 9986 99998854222234467877 78888888865
No 211
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=92.03 E-value=0.23 Score=36.01 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=34.8
Q ss_pred CceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+.+++.+++......+- ..++.|+..+.+....+...+.+++++|.+++.|+.+|...
T Consensus 33 ~~v~~l~~~~~~~~~~~~~-~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~ 92 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAP-LTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE 92 (140)
T ss_dssp ----------------CCC-EEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT
T ss_pred CccccCCHHHHHHHHHcCC-CEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC
Confidence 5566778877776554432 35666888887888899999999999999889998888653
No 212
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=91.90 E-value=0.37 Score=33.32 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=44.9
Q ss_pred CCCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 149 SLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+....++.+++......+ ++.++.|...+.+........+.++++++. ++.|+.+|..
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~-k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~ 66 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQN-ELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVD 66 (112)
T ss_dssp --CCEEECSHHHHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT
T ss_pred ceeEEEECCHHHHHHHHccC-CeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECC
Confidence 34456677788888877765 345666888888888899999999999997 4888777754
No 213
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=91.86 E-value=0.56 Score=35.73 Aligned_cols=101 Identities=11% Similarity=0.201 Sum_probs=58.3
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCceE-Eecc--------hhhHHHHhhhhcccc-ceeeecccHHHHH
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDLVF-DASS--------ELAKTFNEIASKVDD-LVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~F-~~~~--------~~~~~~~~~~~~~~~-~~~~~t~~~~v~~ 109 (216)
.+.+++|.|+..||. ...+.+.+++.++ .++.| +++- ...+.+.+.+.+..- .-++...+..+++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAK 124 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHH
Confidence 334588889999984 4456677777766 23443 2221 223333333333321 1111234567889
Q ss_pred hcCCCC-CeEEEEecCCCCccc-----------ccCCCCCHHHHHHHHhhc
Q psy7942 110 EYSVDD-DTVAIFKKFDEGRVN-----------YEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 110 ~~~v~~-p~i~~~~~~de~~~~-----------y~G~~~~~~~l~~fi~~~ 148 (216)
.|++.. |+++++.+. +.+. +.|.. +.+.|.++|...
T Consensus 125 ~~~v~~~P~~~lid~~--G~i~~~~~~~~~~~~~~g~~-~~~~l~~~i~~l 172 (196)
T 2ywi_A 125 AYDAACTPDFYIFDRD--LKCVYRGQLDDSRPNNGIPV-TGESIRAALDAL 172 (196)
T ss_dssp HHTCCEESEEEEEETT--CBEEEEECSSSCCTTTCCCC-CCHHHHHHHHHH
T ss_pred HhCCCCCCeEEEEcCC--CeEEEccccCcccccccCcc-CHHHHHHHHHHH
Confidence 999975 999998642 2333 34666 677888887653
No 214
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=91.85 E-value=0.32 Score=34.85 Aligned_cols=57 Identities=18% Similarity=0.220 Sum_probs=44.7
Q ss_pred ceeeeCc-chHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 152 LVVEFNH-ETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 152 ~v~~~~~-~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+.+++. +++......+ ++.++.|+..+++.+......+.++++++. ++.|+.+|..
T Consensus 20 mv~~l~~~~~f~~~~~~~-k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d 77 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSED-ILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDAD 77 (125)
T ss_dssp CCEEECCHHHHHHHHHSS-SCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETT
T ss_pred ceEECCCHHHHHHHHccC-CEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC
Confidence 3778888 8888777555 455667888888888899999999999995 5888887754
No 215
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=91.62 E-value=0.49 Score=37.38 Aligned_cols=61 Identities=8% Similarity=0.189 Sum_probs=48.0
Q ss_pred CCceeeeCcchHHH-hhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 150 LPLVVEFNHETAQK-IFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 150 ~P~v~~~~~~~~~~-~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+..+|.+++.. +...+ ++.++.|+..+++.+......+.+++++|.+++.|+.+|...
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~-k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~ 72 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKAD-GAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 72 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT
T ss_pred CCCceeCCHHHHHHHHHhcC-CEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC
Confidence 45678899999876 45544 455666888888888999999999999999988887766543
No 216
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=91.52 E-value=1.1 Score=33.08 Aligned_cols=101 Identities=6% Similarity=-0.016 Sum_probs=57.4
Q ss_pred CCCeEEEEEecCCChh----HHHHHHHHHhhC------CCceE-Eec-c---hhhHHHHhhhhcccc-ceeeecc----c
Q psy7942 45 DSKVVVAGLFKDASSE----LAKTFNEIASKV------DDLVF-DAS-S---ELAKTFNEIASKVDD-LVFVTST----N 104 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~----~~~~f~~~A~~~------~~~~F-~~~-~---~~~~~~~~~~~~~~~-~~~~~t~----~ 104 (216)
..++++|.|+..||.. ....+.++..++ +++.+ +++ + .....+...+.+.+- ..+ .+. .
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~-l~~~~~~~ 103 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLG-LTGSTKQV 103 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCE-EECCHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEE-EeCCHHHH
Confidence 3578999999998864 355666666655 24543 222 1 123333444443322 111 121 1
Q ss_pred HHHHHhcCCCC-C---------------eEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 105 ADILAEYSVDD-D---------------TVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 105 ~~v~~~~~v~~-p---------------~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
..+++.|++.. | +++++-+...-...|.|.. +.+.|.+.|..
T Consensus 104 ~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~ 161 (171)
T 2rli_A 104 AQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSR-SAEQISDSVRR 161 (171)
T ss_dssp HHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSC-CHHHHHHHHHH
T ss_pred HHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCC-CHHHHHHHHHH
Confidence 25788899864 5 6666654223234467887 88888888765
No 217
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.34 E-value=1.5 Score=31.73 Aligned_cols=99 Identities=12% Similarity=0.182 Sum_probs=58.2
Q ss_pred CCCeEEEEEecCCChh-----HHHHHHHHHhhC---CCceE-Eec-chhhHHHHhhhhcccc-ceeeecc---cHHHHHh
Q psy7942 45 DSKVVVAGLFKDASSE-----LAKTFNEIASKV---DDLVF-DAS-SELAKTFNEIASKVDD-LVFVTST---NADILAE 110 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~-----~~~~f~~~A~~~---~~~~F-~~~-~~~~~~~~~~~~~~~~-~~~~~t~---~~~v~~~ 110 (216)
.+++++|.|+..||.. ..+.+.++..++ .++.| +++ +.....|.+.+.+..- ...+... +..+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4678999999999876 455677777766 23443 221 2223445554443321 1111111 3478999
Q ss_pred cCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 111 YSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 111 ~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
|++.. |+++++.+ ++.+.+.. . +.+.|.++|..
T Consensus 112 ~~v~~~P~~~lid~--~G~i~~~~-~-~~~~l~~~l~~ 145 (150)
T 3fw2_A 112 YSIYKIPANILLSS--DGKILAKN-L-RGEELKKKIEN 145 (150)
T ss_dssp TTCCSSSEEEEECT--TSBEEEES-C-CHHHHHHHHHH
T ss_pred cCCCccCeEEEECC--CCEEEEcc-C-CHHHHHHHHHH
Confidence 99986 99999964 23444433 2 56777777654
No 218
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=91.16 E-value=0.48 Score=35.32 Aligned_cols=62 Identities=11% Similarity=0.038 Sum_probs=41.3
Q ss_pred HhhcCCCceeeeCcchHHHhhccCCcceEEEEEeCCc--cchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 145 LSTQSLPLVVEFNHETAQKIFGGEIKSHLLVFFSKAA--GHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 145 i~~~~~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~--~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+..+.+| ++|.+++.........+.++-|..... .....+...|.++|++|.+++.|+.+|.
T Consensus 12 ~~~~g~~---~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdv 75 (137)
T 2qsi_A 12 ARPNAPT---LVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAA 75 (137)
T ss_dssp -----CE---EECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECG
T ss_pred HHhcCCc---ccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEEC
Confidence 3444444 778888876655442233444665555 6677889999999999999998888774
No 219
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.12 E-value=0.36 Score=34.13 Aligned_cols=58 Identities=10% Similarity=0.064 Sum_probs=45.8
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccC-ceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFRE-KEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~-~~~f~~~d~~ 210 (216)
...+.+++.+++..+... ..++.|....++.+......+.++++++.+ ++.|+.+|..
T Consensus 6 ~~~v~~l~~~~f~~~~~~---~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~ 64 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG---DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT 64 (126)
T ss_dssp CCSEEECCTTTHHHHTSS---EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT
T ss_pred CCccEEecHHHHHHHhCC---CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc
Confidence 345788999998887653 246668888888888999999999999986 6888887754
No 220
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=90.92 E-value=0.48 Score=31.80 Aligned_cols=56 Identities=16% Similarity=0.189 Sum_probs=40.3
Q ss_pred eeeCc-chHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 154 VEFNH-ETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 154 ~~~~~-~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+++. +++...... .-++.++.|...+.+........+.++++++. ++.|+.+|..
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~ 59 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVD 59 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEecc
Confidence 45665 677766662 21345566888888888889999999999997 6888777754
No 221
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=90.90 E-value=0.37 Score=37.66 Aligned_cols=60 Identities=10% Similarity=0.113 Sum_probs=48.2
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
-+.+..++.+++......+ ++.++.|...+++.+......+.++++++.+++.|+.+|..
T Consensus 96 ~~~v~~l~~~~f~~~~~~~-~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~ 155 (210)
T 3apq_A 96 DPEIITLERREFDAAVNSG-ELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCG 155 (210)
T ss_dssp CTTSEECCHHHHHHHHHHS-CCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETT
T ss_pred CCceEEecHHHHHHHHccC-CcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECC
Confidence 3457788888887766555 35566788888888899999999999999998999888754
No 222
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=90.71 E-value=0.64 Score=31.87 Aligned_cols=57 Identities=16% Similarity=0.128 Sum_probs=41.1
Q ss_pred eeeeCc-chHHHhhcc---CCcceEEEEEeCCccchhhhhHHHHHHHHhcc-CceEEEEcCCC
Q psy7942 153 VVEFNH-ETAQKIFGG---EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFR-EKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~-~~~~~~~~~---~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r-~~~~f~~~d~~ 210 (216)
+.+++. +++...... + ++.++.|...+.+........+.+++++++ .++.|+.+|..
T Consensus 2 v~~i~~~~~~~~~~~~~~~~-~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~ 63 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGD-KLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD 63 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTT-CCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT
T ss_pred ccccCCHHHHHHHHhcccCC-CEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 567776 778777764 3 345666888888888999999999999963 45888888754
No 223
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=90.65 E-value=0.59 Score=32.77 Aligned_cols=61 Identities=18% Similarity=0.136 Sum_probs=46.2
Q ss_pred CCCceeeeCcchHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 149 SLPLVVEFNHETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
....+.+++.+++...... .-++.++.|...+.+........+.++++++.+ +.|+.+|..
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~ 77 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCN 77 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECS
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecC
Confidence 3456788898888776652 223556668888888888899999999999984 888888764
No 224
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=90.62 E-value=0.45 Score=33.75 Aligned_cols=59 Identities=12% Similarity=-0.134 Sum_probs=44.2
Q ss_pred CceeeeCcchHHHhhcc-CCcceEEEEEeC-------CccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 151 PLVVEFNHETAQKIFGG-EIKSHLLVFFSK-------AAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 151 P~v~~~~~~~~~~~~~~-~~~~~lllf~~~-------~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+.+...+.+++...... .-++.++.|... ..+........+.++++++++++.|+.+|.
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~ 71 (123)
T 1wou_A 5 EEVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQV 71 (123)
T ss_dssp EEEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEEC
T ss_pred eeEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEEC
Confidence 34555667777766654 223445668888 788888899999999999998999988876
No 225
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=90.54 E-value=2.9 Score=29.63 Aligned_cols=100 Identities=18% Similarity=0.192 Sum_probs=57.7
Q ss_pred CCCeEEEEEecCCChhHHHH---HHH---HHhhC--CCceEE-ec-chhhHHHHhhhhcccc-ceeeecccHHHHH--hc
Q psy7942 45 DSKVVVAGLFKDASSELAKT---FNE---IASKV--DDLVFD-AS-SELAKTFNEIASKVDD-LVFVTSTNADILA--EY 111 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~~~~---f~~---~A~~~--~~~~F~-~~-~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~--~~ 111 (216)
..++++|.|+.+||...... +.+ +..++ .++.|. ++ +...+.|...+.+..- ...+...+..+.. .|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46889999999998655443 433 55554 334432 21 2233444444443321 1111223334443 88
Q ss_pred CCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 112 SVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 112 ~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
++.. |+++++.+ ++.+.+ +.. +.+.|.++|...
T Consensus 106 ~v~~~P~~~lid~--~G~i~~-~~~-~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDG--RKRVIL-KDT-SMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECT--TCBEEE-CSC-CHHHHHHHHHC-
T ss_pred CCCCCCeEEEECC--CCCEEe-cCC-CHHHHHHHHHHH
Confidence 9876 99999974 335555 556 889999999865
No 226
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=90.53 E-value=0.63 Score=32.43 Aligned_cols=59 Identities=7% Similarity=-0.017 Sum_probs=46.1
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
...+..++.+++......+ ++.++.|..++++........+.++++++..++.++.+|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~ 69 (118)
T 1zma_A 11 IKDLEVTTVVRAQEALDKK-ETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEE 69 (118)
T ss_dssp TTTSEECCHHHHHHHHHTT-CCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTC
T ss_pred HhhhhcCCHHHHHHHHhCC-CeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCC
Confidence 3456778888887776665 3556668888888889999999999999988888886654
No 227
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=90.44 E-value=0.81 Score=31.09 Aligned_cols=57 Identities=12% Similarity=0.127 Sum_probs=41.8
Q ss_pred eeee-CcchHHHhhc--cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEF-NHETAQKIFG--GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~-~~~~~~~~~~--~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.++ +.+++..... .+ ++.++.|...+.+........+.++|+++ +++.|+.+|...
T Consensus 3 v~~i~~~~~~~~~~~~~~~-~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~ 62 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGS-RLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ 62 (107)
T ss_dssp EEEECSGGGHHHHHHHTTT-SCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred eEEecCHHHHHHHHHhCCC-CEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc
Confidence 4455 4567777663 33 34566688888888889999999999999 468888877643
No 228
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=90.43 E-value=2.3 Score=30.44 Aligned_cols=99 Identities=12% Similarity=0.151 Sum_probs=57.5
Q ss_pred CCCeEEEEEecCCChhH---HHHHHHHHhhC--CCceE-Eecc-hhhHHHHhhhhccccc--eeeecc---cHHHHHhcC
Q psy7942 45 DSKVVVAGLFKDASSEL---AKTFNEIASKV--DDLVF-DASS-ELAKTFNEIASKVDDL--VFVTST---NADILAEYS 112 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~---~~~f~~~A~~~--~~~~F-~~~~-~~~~~~~~~~~~~~~~--~~~~t~---~~~v~~~~~ 112 (216)
.+++++|.|+..||... .+.+.++..++ .++.+ ++|- .....|.+.+.+..-. ..+... +..+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 45789999999998544 45677777777 23443 2221 2234454444433210 011111 246888999
Q ss_pred CCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 113 VDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 113 v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+.. |+.+++.+ ++.+.+.+ . ..+.|.++|..
T Consensus 111 v~~~P~~~lid~--~G~i~~~~-~-~~~~l~~~l~~ 142 (143)
T 4fo5_A 111 LRKGFKNFLIND--EGVIIAAN-V-TPEKLTEILKA 142 (143)
T ss_dssp GGGCCCEEEECT--TSBEEEES-C-CHHHHHHHHTC
T ss_pred CCCCCcEEEECC--CCEEEEcc-C-CHHHHHHHHHh
Confidence 875 99888875 34555543 3 56778877753
No 229
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=90.40 E-value=0.5 Score=32.14 Aligned_cols=58 Identities=12% Similarity=0.140 Sum_probs=45.4
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhcc---CceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFR---EKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r---~~~~f~~~d~~~ 211 (216)
.+..++.+++...... ++.++.|...+.+........+.++++++. ..+.++.+|...
T Consensus 6 ~v~~l~~~~~~~~~~~--~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~ 66 (111)
T 3uvt_A 6 TVLALTENNFDDTIAE--GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA 66 (111)
T ss_dssp CSEECCTTTHHHHHHS--SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT
T ss_pred cceEcChhhHHHHhcC--CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc
Confidence 5678899998887773 345666888888888899999999999986 458888777643
No 230
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=90.21 E-value=1.5 Score=32.74 Aligned_cols=87 Identities=16% Similarity=0.111 Sum_probs=51.0
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC---CceE--EecchhhHHHHhhhhccccceeeec---ccHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD---DLVF--DASSELAKTFNEIASKVDDLVFVTS---TNADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~---~~~F--~~~~~~~~~~~~~~~~~~~~~~~~t---~~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.+++.++. ++.+ ...+...+.+.+...+..-.-+... .+..+++.|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 468899999999984 44567777777763 3333 2123334445554444321000001 11578999999
Q ss_pred CC-CeEEEEecCCCCccccc
Q psy7942 114 DD-DTVAIFKKFDEGRVNYE 132 (216)
Q Consensus 114 ~~-p~i~~~~~~de~~~~y~ 132 (216)
.. |+++++.+. .+.+.+.
T Consensus 127 ~~~Pt~~lid~~-~G~iv~~ 145 (165)
T 3s9f_A 127 ESIPTLIGLNAD-TGDTVTT 145 (165)
T ss_dssp CSSSEEEEEETT-TCCEEES
T ss_pred CCCCEEEEEeCC-CCEEEec
Confidence 86 999999862 1345543
No 231
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=90.14 E-value=0.28 Score=35.02 Aligned_cols=59 Identities=8% Similarity=0.173 Sum_probs=38.0
Q ss_pred ceeeeCcchHHHh-hccCCcceEEEEEeCCcc--------------chhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKI-FGGEIKSHLLVFFSKAAG--------------HYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~-~~~~~~~~lllf~~~~~~--------------~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++.+++... ...+ ++.++.|...+.+ ........+.++++++.+++.|+.+|...
T Consensus 4 ~v~~l~~~~f~~~~~~~~-k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~ 77 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKAD-GAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQ 77 (123)
T ss_dssp SCEECCSTTHHHHTTSCS-SEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTS
T ss_pred ccEecChhhHHHHHHhCC-CeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 3667888888744 3444 4556668888888 78888899999999999888888877543
No 232
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=90.00 E-value=1.4 Score=32.14 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCCeEEEEEecCCChh---HHHHHHHHHhhC--CCceE-Eec-chhhHHHHhhhhccccceeeecccH---HHHHhcCCC
Q psy7942 45 DSKVVVAGLFKDASSE---LAKTFNEIASKV--DDLVF-DAS-SELAKTFNEIASKVDDLVFVTSTNA---DILAEYSVD 114 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~---~~~~f~~~A~~~--~~~~F-~~~-~~~~~~~~~~~~~~~~~~~~~t~~~---~v~~~~~v~ 114 (216)
.+++++|.|+.+||.. ..+.+.+++.++ ..+.+ +++ +.....+.....++. ...+...+. .+++.|++.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~v~ 112 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLP-WVCVRDANGAYSSYISLYNVT 112 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCS-SEEEECSSGGGCHHHHHHTCC
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCC-ceEEECCCCcchHHHHHcCcc
Confidence 3578899999999853 456777777766 22443 221 222233333333332 212122233 288999997
Q ss_pred C-CeEEEEecCCCCcccccCCCCCHHHH
Q psy7942 115 D-DTVAIFKKFDEGRVNYEGPASDEAAL 141 (216)
Q Consensus 115 ~-p~i~~~~~~de~~~~y~G~~~~~~~l 141 (216)
. |+++++.+...-...+.|.. +.+..
T Consensus 113 ~~P~~~lid~~G~i~~~~~g~~-~~e~~ 139 (152)
T 2lrt_A 113 NLPSVFLVNRNNELSARGENIK-DLDEA 139 (152)
T ss_dssp SCSEEEEEETTTEEEEETTTCS-CHHHH
T ss_pred cCceEEEECCCCeEEEecCCHH-HHHHH
Confidence 5 99999975222233456665 54443
No 233
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=89.91 E-value=0.57 Score=32.99 Aligned_cols=61 Identities=11% Similarity=0.090 Sum_probs=45.5
Q ss_pred CCceeeeCc-chHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCCC
Q psy7942 150 LPLVVEFNH-ETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQP 211 (216)
Q Consensus 150 ~P~v~~~~~-~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~~ 211 (216)
.+.+..++. +++......+ ++.++.|...+.+........+.+++++++++ +.|+.+|...
T Consensus 14 ~~~~~~i~~~~~f~~~l~~~-k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~ 76 (121)
T 2j23_A 14 RGSVQVISSYDQFKQVTGGD-KVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE 76 (121)
T ss_dssp CCCEEECCSHHHHHHHHSSS-SCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT
T ss_pred CcceEEcCCHHHHHHHHcCC-CEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC
Confidence 345666665 6777777555 34566688888888889999999999999886 8888877643
No 234
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=89.63 E-value=2.4 Score=30.23 Aligned_cols=78 Identities=12% Similarity=0.051 Sum_probs=46.7
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC---CceEE-e-cchhhHHHHhhhhccccceeee---cccHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD---DLVFD-A-SSELAKTFNEIASKVDDLVFVT---STNADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~---~~~F~-~-~~~~~~~~~~~~~~~~~~~~~~---t~~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.+++.++. ++.+. + ++.....+.+.+.+..-.-+-. ..+..+++.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 467899999999985 44567777777763 34332 1 2223444444444432100000 123578899999
Q ss_pred CC-CeEEEEe
Q psy7942 114 DD-DTVAIFK 122 (216)
Q Consensus 114 ~~-p~i~~~~ 122 (216)
.. |+++++.
T Consensus 107 ~~~P~~~lid 116 (144)
T 1i5g_A 107 KSIPTLVGVE 116 (144)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 86 9999997
No 235
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=89.29 E-value=2.6 Score=30.21 Aligned_cols=78 Identities=13% Similarity=0.076 Sum_probs=47.1
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC---CceEE--ecchhhHHHHhhhhccccceeee---cccHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD---DLVFD--ASSELAKTFNEIASKVDDLVFVT---STNADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~---~~~F~--~~~~~~~~~~~~~~~~~~~~~~~---t~~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.+++.++. ++.+. -++...+.+.+.+.+..-.-+-. ..+..+++.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 467899999999984 44567777777763 44332 12233444555444432100000 124578899999
Q ss_pred CC-CeEEEEe
Q psy7942 114 DD-DTVAIFK 122 (216)
Q Consensus 114 ~~-p~i~~~~ 122 (216)
.. |+++++.
T Consensus 107 ~~~Pt~~lid 116 (146)
T 1o8x_A 107 ESIPTLIGVD 116 (146)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 76 9999997
No 236
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=89.12 E-value=0.42 Score=33.76 Aligned_cols=39 Identities=10% Similarity=0.019 Sum_probs=32.6
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
++.++.|...+++.+......+.++++++++++.++.+|
T Consensus 27 k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~ 65 (126)
T 2l57_A 27 IPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYAR 65 (126)
T ss_dssp SCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEE
T ss_pred CcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEe
Confidence 345666888888888889999999999998889888887
No 237
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=89.05 E-value=0.36 Score=34.36 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=40.4
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.|.+...+.+........+ ++.++.|...+++.+......+.++++++++++.++.+|..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~-k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d 83 (128)
T 3ul3_B 24 VPRLQQNGSNIINGVNMKN-TVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLD 83 (128)
T ss_dssp --CCCCCCCSSSSBTTSCC-SEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGG
T ss_pred CCccccCCccHHHHHHccC-CEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC
Confidence 4444444443333333333 34556688888888899999999999999988888887754
No 238
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=88.98 E-value=0.7 Score=31.08 Aligned_cols=57 Identities=14% Similarity=0.121 Sum_probs=41.3
Q ss_pred eeeeC-cchHHHhhc--cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 153 VVEFN-HETAQKIFG--GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 153 v~~~~-~~~~~~~~~--~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+++ .+++..... .+ ++.++.|...+.+........+.+++++|++ +.|+.+|...
T Consensus 2 v~~i~~~~~~~~~l~~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~ 61 (105)
T 3m9j_A 2 VKQIESKTAFQEALDAAGD-KLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD 61 (105)
T ss_dssp CEECCSHHHHHHHHHHTTT-SCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT
T ss_pred eEEcCCHHHHHHHHHhcCC-CeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh
Confidence 34553 456666665 33 3456668888888889999999999999987 8888877543
No 239
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=88.96 E-value=1.4 Score=33.26 Aligned_cols=102 Identities=9% Similarity=0.206 Sum_probs=58.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCCC-ceE-Eecc--------hhhHHHHhhhhcccc-ceeeecccHHHHHh
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVDD-LVF-DASS--------ELAKTFNEIASKVDD-LVFVTSTNADILAE 110 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~~-~~F-~~~~--------~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~ 110 (216)
..++++|.|+..||. .....+.+++.++.+ +.| +++- .....+.+.+.+..- .-.+...+.++++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 358899999999985 446678888888733 543 2221 222333333333221 11112345678999
Q ss_pred cCCCC-CeEEEEecCCCCcccccCCCC---------CHHHHHHHHhhc
Q psy7942 111 YSVDD-DTVAIFKKFDEGRVNYEGPAS---------DEAALRKFLSTQ 148 (216)
Q Consensus 111 ~~v~~-p~i~~~~~~de~~~~y~G~~~---------~~~~l~~fi~~~ 148 (216)
|++.. |+++++.+ ++.+.+.|... +.+.|.+.|...
T Consensus 112 ~~v~~~P~~~lid~--~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~l 157 (188)
T 2cvb_A 112 YRALRTPEVFLFDE--RRLLRYHGRVNDNPKDPSKVQSHDLEAAIEAL 157 (188)
T ss_dssp TTCCEESEEEEECT--TCBEEEEECSSSCTTCGGGCCCCHHHHHHHHH
T ss_pred cCCCCCCeEEEECC--CCcEEEEEecCCccccccccCHHHHHHHHHHH
Confidence 99986 99998864 23445544321 456677776653
No 240
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=88.95 E-value=1.5 Score=31.94 Aligned_cols=101 Identities=9% Similarity=0.021 Sum_probs=55.5
Q ss_pred CCCeEEEEEecCCChh-H---HHHHHHHHhhC-C-----CceE-Eecc----hhhHHHHhhhhcccc-ceeeecc----c
Q psy7942 45 DSKVVVAGLFKDASSE-L---AKTFNEIASKV-D-----DLVF-DASS----ELAKTFNEIASKVDD-LVFVTST----N 104 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~-~---~~~f~~~A~~~-~-----~~~F-~~~~----~~~~~~~~~~~~~~~-~~~~~t~----~ 104 (216)
..++++|.|+..||.. . .+.+.++..++ + ++.+ +++- .......+.+.+.+- ... .+. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~-l~~~~d~~ 100 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVG-LTGTREEV 100 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEE-EECCHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEE-EeCCHHHH
Confidence 3678899999998864 3 45566666554 1 4432 2221 112233333333321 111 111 2
Q ss_pred HHHHHhcCCCC-C---------------eEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 105 ADILAEYSVDD-D---------------TVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 105 ~~v~~~~~v~~-p---------------~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
..+++.|++.. | +++++-+...-...|.|.. +.+.|.+.|..
T Consensus 101 ~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~-~~~~l~~~l~~ 158 (164)
T 2ggt_A 101 DQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNK-RKGEIAASIAT 158 (164)
T ss_dssp HHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTC-CHHHHHHHHHH
T ss_pred HHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCC-CHHHHHHHHHH
Confidence 24788899864 6 6666654223234467777 88888888765
No 241
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=88.59 E-value=0.077 Score=35.89 Aligned_cols=57 Identities=18% Similarity=0.239 Sum_probs=40.6
Q ss_pred eeeeCcchHHHhh-ccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFNHETAQKIF-GGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~~~~~~~~-~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++.+++.... ..+ ++.++.|...+.+........+.++++++.+++.|+.+|..
T Consensus 3 v~~l~~~~~~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~ 60 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSD-KPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVD 60 (106)
Confidence 4566666665433 333 34466677777777888899999999999988888777654
No 242
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=88.91 E-value=0.92 Score=31.80 Aligned_cols=59 Identities=19% Similarity=0.170 Sum_probs=42.4
Q ss_pred Cceeee--CcchHH-HhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 151 PLVVEF--NHETAQ-KIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 151 P~v~~~--~~~~~~-~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.+..+ +.+++. .+...+ ++.++.|...+.+........|.++++++ +++.|+.+|...
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~-~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~ 64 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAP-GLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK 64 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCS-SCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT
T ss_pred CcceEecCCHHHHHHHHHhCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC
Confidence 345666 455666 344444 34566688888888888999999999999 788888887643
No 243
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=88.81 E-value=2.2 Score=32.03 Aligned_cols=104 Identities=11% Similarity=0.171 Sum_probs=55.2
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC--CCceEE-ec-c-hhhHHHHhhhhccc--cceeeecccHHHHHhcCC-
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV--DDLVFD-AS-S-ELAKTFNEIASKVD--DLVFVTSTNADILAEYSV- 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~F~-~~-~-~~~~~~~~~~~~~~--~~~~~~t~~~~v~~~~~v- 113 (216)
..++++|.|+..||. .....+.++..++ .++.+. ++ + ...+.+...+.+.. ..-++...+..+.+.|++
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 467889999999985 4456677777766 244432 11 1 11122222222222 111112233455666665
Q ss_pred ----CCCeEEEEecCCCCcccccCCCC-CHHHHHHHHhhc
Q psy7942 114 ----DDDTVAIFKKFDEGRVNYEGPAS-DEAALRKFLSTQ 148 (216)
Q Consensus 114 ----~~p~i~~~~~~de~~~~y~G~~~-~~~~l~~fi~~~ 148 (216)
..|+++++-+...-...|.|... +.+.|.++|...
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHH
Confidence 24999888642222334667641 367788888753
No 244
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=88.61 E-value=0.61 Score=32.59 Aligned_cols=58 Identities=5% Similarity=0.134 Sum_probs=42.6
Q ss_pred CceeeeCc-chHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 151 PLVVEFNH-ETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 151 P~v~~~~~-~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+.++++ +.+..+...+ ++.++.|...+.+........+.++++++.+ +.|+.+|..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~-k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~ 70 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQN-DKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD 70 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHC-SEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT
T ss_pred hheeecCCHHHHHHHHhCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC
Confidence 44556654 4556666655 3456668888888888899999999999987 888887754
No 245
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=88.42 E-value=1.1 Score=31.04 Aligned_cols=56 Identities=11% Similarity=0.183 Sum_probs=41.7
Q ss_pred eeeeCc-chHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFNH-ETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~-~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++. +++...... .-++.++.|...+.+........+.++++++ ++.|+.+|..
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~ 72 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD 72 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC
Confidence 678887 777776662 2234566688888888888999999999998 6777776653
No 246
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=87.76 E-value=0.91 Score=31.23 Aligned_cols=54 Identities=7% Similarity=0.079 Sum_probs=39.7
Q ss_pred eeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 155 EFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.-+.+++......+ ++.++.|...+.+........+.++++++.+ +.|+.+|..
T Consensus 11 ~~~~~~f~~~~~~~-k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~ 64 (109)
T 3f3q_A 11 FKTASEFDSAIAQD-KLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVD 64 (109)
T ss_dssp CCSHHHHHHHTTSS-SCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT
T ss_pred CCCHHHHHHHHhcC-CEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECC
Confidence 33455666666655 4556668888888888999999999999975 777766653
No 247
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=87.44 E-value=1.6 Score=34.26 Aligned_cols=101 Identities=14% Similarity=0.262 Sum_probs=59.8
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC--CceE-Eecc--------hhhHHHHhhhhcccc-ceeeecccHHHHH
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD--DLVF-DASS--------ELAKTFNEIASKVDD-LVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~--~~~F-~~~~--------~~~~~~~~~~~~~~~-~~~~~t~~~~v~~ 109 (216)
...+++|.|+..||. ...+.+.+++.++. .+.| +++- ...+.+.+.+.+.+- .-++...+..+++
T Consensus 58 gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 137 (218)
T 3u5r_E 58 DSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAK 137 (218)
T ss_dssp TCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHH
Confidence 344688989999984 45677888888772 2443 3322 333344444443321 1121234567899
Q ss_pred hcCCCC-CeEEEEecCCCCcccccCCCC----------CHHHHHHHHhh
Q psy7942 110 EYSVDD-DTVAIFKKFDEGRVNYEGPAS----------DEAALRKFLST 147 (216)
Q Consensus 110 ~~~v~~-p~i~~~~~~de~~~~y~G~~~----------~~~~l~~fi~~ 147 (216)
.|++.. |+++++.+ ++.+.|.|... +.+.|.+.|..
T Consensus 138 ~~~v~~~P~~~liD~--~G~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ 184 (218)
T 3u5r_E 138 AYGAACTPDFFLYDR--ERRLVYHGQFDDARPGNGKDVTGADLRAAVDA 184 (218)
T ss_dssp HHTCCEESEEEEECT--TCBEEEEECSSSCCTTSCCCCCCHHHHHHHHH
T ss_pred HcCCCCCCeEEEECC--CCcEEEeccccccccccccccCHHHHHHHHHH
Confidence 999986 99999964 34566665321 35667776654
No 248
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=87.23 E-value=0.62 Score=31.71 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=35.8
Q ss_pred chHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 159 ETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 159 ~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+++......+ ++.++.|..++.+........+.+++++|. ++.|+.+|..
T Consensus 9 ~~~~~~~~~~-~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~ 58 (105)
T 4euy_A 9 EELATYIEEQ-QLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQ 58 (105)
T ss_dssp -CCSSSTTCS-SEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEEC
T ss_pred HHHHHHHhcC-CCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECC
Confidence 4455555444 345666888888888899999999999994 6777766643
No 249
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=87.14 E-value=1.3 Score=30.06 Aligned_cols=57 Identities=16% Similarity=0.050 Sum_probs=40.4
Q ss_pred eeee-CcchHHHhhcc---CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEF-NHETAQKIFGG---EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~-~~~~~~~~~~~---~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.++ +.+++...+.. .-++.++.|...+.+........+.+++++|. ++.|+.+|..
T Consensus 6 v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~ 66 (113)
T 1ti3_A 6 VIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD 66 (113)
T ss_dssp EEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT
T ss_pred eeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc
Confidence 4555 45666666553 11344556888777788888999999999997 6888877754
No 250
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=86.56 E-value=1.3 Score=28.40 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=33.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
+.++.|...+.+........++++++++.+++.++.+|...
T Consensus 4 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 44 (85)
T 1fo5_A 4 VKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVME 44 (85)
T ss_dssp EEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSS
T ss_pred eEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCC
Confidence 34667888888888899999999999999888888777543
No 251
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=86.38 E-value=1.5 Score=31.60 Aligned_cols=61 Identities=5% Similarity=-0.035 Sum_probs=44.3
Q ss_pred CCCceeeeCcchHHHhhccC-C-cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 149 SLPLVVEFNHETAQKIFGGE-I-KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 149 ~~P~v~~~~~~~~~~~~~~~-~-~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+..+.+++.+++....... . ++.++.|+..++..+..+...|.++|++|. ++.|+.+|..
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~ 70 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVN 70 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCS
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhh
Confidence 45567788887877655432 1 234555878888888899999999999995 5888887754
No 252
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=86.02 E-value=1.2 Score=33.23 Aligned_cols=57 Identities=5% Similarity=-0.019 Sum_probs=39.8
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCC--ccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKA--AGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~--~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
-+.+++.+++.....++ .+.++.|.... ......+...|.++|++|.++ +.|+.+|.
T Consensus 18 g~~~~t~~~F~~~v~~~-~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdv 77 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQA-PDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADL 77 (140)
T ss_dssp TCEECCHHHHHHHHHTC-SSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCH
T ss_pred CCccCCHHHHHHHHhCC-CCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEEC
Confidence 44588888887766543 23333344333 445567889999999999999 99988773
No 253
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=85.81 E-value=1.6 Score=29.86 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=41.4
Q ss_pred ceeeeC-cchHHHhhcc----CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 152 LVVEFN-HETAQKIFGG----EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 152 ~v~~~~-~~~~~~~~~~----~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+.+++ .+++...+.. + ++.++.|...+++........+.+++++|. ++.|+.+|..
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~-~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~ 68 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTG-KLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD 68 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHT-CCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT
T ss_pred ceEEecCHHHHHHHHHhcccCC-CEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc
Confidence 456664 5666666553 3 345666888888888889999999999997 6777777654
No 254
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=85.52 E-value=3.9 Score=28.97 Aligned_cols=78 Identities=15% Similarity=0.124 Sum_probs=45.6
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhCC---CceEE-e-cchhhHHHHhhhhccccceeee---cccHHHHHhcCC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKVD---DLVFD-A-SSELAKTFNEIASKVDDLVFVT---STNADILAEYSV 113 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~~---~~~F~-~-~~~~~~~~~~~~~~~~~~~~~~---t~~~~v~~~~~v 113 (216)
.+++++|.|+.+||. ...+.+.++++++. ++.+. + ++...+.+.+.+.+..-..+-. ..+..+++.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 467899999999985 44567777777663 34332 1 2222334444443332100000 113568899999
Q ss_pred CC-CeEEEEe
Q psy7942 114 DD-DTVAIFK 122 (216)
Q Consensus 114 ~~-p~i~~~~ 122 (216)
.. |+++++.
T Consensus 107 ~~~Pt~~lid 116 (144)
T 1o73_A 107 ESIPTLITIN 116 (144)
T ss_dssp CSSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 76 9999998
No 255
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=85.10 E-value=2.1 Score=30.15 Aligned_cols=59 Identities=14% Similarity=-0.013 Sum_probs=41.7
Q ss_pred Cceeee-CcchHHHhhcc---CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 151 PLVVEF-NHETAQKIFGG---EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 151 P~v~~~-~~~~~~~~~~~---~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
..+.++ +.+++...+.. .-++.++.|...+.+........|.+++++|. ++.|+.+|..
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d 78 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD 78 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc
Confidence 345666 44566655543 11345666888888888889999999999997 6888887754
No 256
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=84.49 E-value=0.9 Score=33.56 Aligned_cols=56 Identities=7% Similarity=0.012 Sum_probs=31.3
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCC--ccchhhhhHHHHHHHHhccCceE--EEEcCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKA--AGHYESHFEPVQTVAKDFREKEE--QDEDDD 209 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~--~~~~~~~~~~l~~vA~~~r~~~~--f~~~d~ 209 (216)
-+..++.+++....... ...++.|.... .+........|.++|++| +++. |+.+|.
T Consensus 18 ~~~~l~~~~f~~~i~~~-~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~ 77 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRV-GDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADL 77 (142)
T ss_dssp TCEECCCC--------C-CSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECH
T ss_pred cCcccccccHHHHHHhC-CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEEC
Confidence 56788888888777654 23344454322 345677889999999999 8888 887764
No 257
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=84.43 E-value=1.4 Score=31.55 Aligned_cols=53 Identities=13% Similarity=0.158 Sum_probs=40.2
Q ss_pred ceeeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 152 LVVEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
.+.+++.+++...... +.++.|...+++.+......+.+++++++ +.|+.+|.
T Consensus 17 ~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~ 69 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIW 69 (135)
T ss_dssp EEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEE
T ss_pred ceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEEC
Confidence 4567777777776654 44666888888888888999999999987 66666665
No 258
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=84.19 E-value=6.7 Score=28.64 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=56.2
Q ss_pred CCe-EEEEEe-cCCChh---HHHHHHHHHhhC--CCceE-EecchhhHHHHhhhhccccc-eeeecccHHHHHhcCCCC-
Q psy7942 46 SKV-VVAGLF-KDASSE---LAKTFNEIASKV--DDLVF-DASSELAKTFNEIASKVDDL-VFVTSTNADILAEYSVDD- 115 (216)
Q Consensus 46 ~~v-~~V~f~-~~~~~~---~~~~f~~~A~~~--~~~~F-~~~~~~~~~~~~~~~~~~~~-~~~~t~~~~v~~~~~v~~- 115 (216)
.+. ++|.|+ ..||.. ..+.+.+++.++ ..+.+ +++-.....+.+.+.+.+-- -.+...+.++++.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 444 778888 888854 455666666666 23433 33334444555555544321 222334567899999864
Q ss_pred ----CeEEEEecCCCCcccccCCCC---CHHHHHHHHh
Q psy7942 116 ----DTVAIFKKFDEGRVNYEGPAS---DEAALRKFLS 146 (216)
Q Consensus 116 ----p~i~~~~~~de~~~~y~G~~~---~~~~l~~fi~ 146 (216)
|+++++.+...-...|.|... +.+.+.+.|+
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHH
T ss_pred CcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHH
Confidence 988888652222234566331 2344444444
No 259
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=84.16 E-value=1.8 Score=31.77 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=43.4
Q ss_pred CCceeeeC-cchHHHhhcc--CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFN-HETAQKIFGG--EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~-~~~~~~~~~~--~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
...+.+++ .+++..+... + ++.++.|...+++.+......+.++++++. ++.|+.+|..
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~-~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~ 72 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAK-SLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAE 72 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTT-SCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT
T ss_pred cCCeEEcCCHHHHHHHHHhcCC-CeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECC
Confidence 34566776 4677776665 4 355666888888888899999999999984 6888887754
No 260
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=84.14 E-value=2.2 Score=31.10 Aligned_cols=53 Identities=9% Similarity=-0.031 Sum_probs=39.0
Q ss_pred cchHHH-hhc-cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 158 HETAQK-IFG-GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 158 ~~~~~~-~~~-~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+++.. +.. .+ ++.++.|...+.+........+.++++++.+++.|+.+|...
T Consensus 11 ~~~~~~~v~~~~~-k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~ 65 (142)
T 1qgv_A 11 GWQVDQAILSEED-RVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE 65 (142)
T ss_dssp HHHHHHHHHTCSS-SEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT
T ss_pred HHHHHHHHHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc
Confidence 455554 333 23 344556888888888999999999999998888888877543
No 261
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=83.34 E-value=2.2 Score=32.56 Aligned_cols=57 Identities=14% Similarity=-0.037 Sum_probs=41.0
Q ss_pred eeeeCc-chHHHhhc--cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFNH-ETAQKIFG--GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~~-~~~~~~~~--~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+..++. +++..... ++ ++.|+-|...+++....+...|.++|++|.+++.|+.+|.-
T Consensus 23 v~~l~t~~~f~~~v~~~~~-k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVD 82 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDE-RLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDIT 82 (160)
T ss_dssp CEECCSHHHHHHHHHHCSS-SEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETT
T ss_pred hhccCCHHHHHHHHHhcCC-CEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECC
Confidence 556664 56654432 33 33344488888888899999999999999998888777654
No 262
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=82.44 E-value=1.9 Score=29.52 Aligned_cols=53 Identities=9% Similarity=0.070 Sum_probs=38.1
Q ss_pred eeeCcchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 154 VEFNHETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
..++.+++ .....+ ++.++.|...+.+........+.++++++. ++.|+.+|.
T Consensus 6 ~~~~~~~f-~~~~~~-~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~ 58 (110)
T 2l6c_A 6 DITTEAGM-AHFEGL-SDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDS 58 (110)
T ss_dssp BCGGGCSH-HHHTTC-SEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEG
T ss_pred ecCCHHHH-HHHHcC-CCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcC
Confidence 34566777 444444 345666888888888999999999999986 577766654
No 263
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=81.92 E-value=9.1 Score=25.97 Aligned_cols=77 Identities=16% Similarity=0.173 Sum_probs=44.6
Q ss_pred CCeEEEEEecCCChhHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec--ccHHHHHhcCCCCCeEEEEe
Q psy7942 46 SKVVVAGLFKDASSELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS--TNADILAEYSVDDDTVAIFK 122 (216)
Q Consensus 46 ~~v~~V~f~~~~~~~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~v~~~~~v~~p~i~~~~ 122 (216)
....++.|+.+||...... ..+..++ ..+.|. .+| .. .+++++++|+...|++ +.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~-~~~L~~l~~~i~~~--------------~vd-----i~~~~~~el~~~~g~~vP~l--~~ 72 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEA-KEVLQPYKDRFILQ--------------EVD-----ITLPENSTWYERYKFDIPVF--HL 72 (100)
T ss_dssp CCCEEEEEECSSCHHHHHH-HHHTSTTSSSSEEE--------------EEE-----TTSSTTHHHHHHSSSSCSEE--EE
T ss_pred CCCEEEEEeCCCCcchHHH-HHHHHHhhhCCeEE--------------EEE-----CCCcchHHHHHHHCCCCCEE--EE
Confidence 4456777888988533221 1111222 346676 333 33 4578889999224976 34
Q ss_pred cCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 123 KFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 123 ~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
. +... .-|.+ +.+.|.+||...
T Consensus 73 ~--g~~~-~~~g~-~~~~l~~~l~~~ 94 (100)
T 1wjk_A 73 N--GQFL-MMHRV-NTSKLEKQLRKL 94 (100)
T ss_dssp S--SSEE-EESSC-CHHHHHHHHHSS
T ss_pred C--CEEE-EecCC-CHHHHHHHHHHH
Confidence 3 2222 34557 889999999764
No 264
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=81.83 E-value=2.1 Score=31.53 Aligned_cols=53 Identities=11% Similarity=0.022 Sum_probs=39.8
Q ss_pred CcchHHHhhc--cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 157 NHETAQKIFG--GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 157 ~~~~~~~~~~--~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++..... .+ ++.++.|..++++.+......|.+++++|.+++.|+.+|..
T Consensus 10 ~~~~~~~~i~~~~~-k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d 64 (149)
T 3gix_A 10 SKKEVDQAIKSTAE-KVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD 64 (149)
T ss_dssp SHHHHHHHHHHCCS-SEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT
T ss_pred CHHHHHHHHHhcCC-CEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC
Confidence 3456665543 23 34455688888888899999999999999998888887753
No 265
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=81.68 E-value=2.8 Score=33.17 Aligned_cols=59 Identities=8% Similarity=0.092 Sum_probs=43.7
Q ss_pred CCceeee-CcchHHHhhccCC--cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 150 LPLVVEF-NHETAQKIFGGEI--KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 150 ~P~v~~~-~~~~~~~~~~~~~--~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+..|.++ +.+++.......- .+.++.|+..+++.+..+...|.++|++|. .+.|+.+|.
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~ 159 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRA 159 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEH
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEEC
Confidence 4557788 7778877664321 234555888888889999999999999995 788877764
No 266
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=81.43 E-value=10 Score=25.77 Aligned_cols=58 Identities=10% Similarity=0.113 Sum_probs=32.4
Q ss_pred HHHHHhHhCCCeEEEEEecCCChhH---HHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc-----HHHH
Q psy7942 37 DEIKAFIADSKVVVAGLFKDASSEL---AKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN-----ADIL 108 (216)
Q Consensus 37 ~~~~~~~~~~~v~~V~f~~~~~~~~---~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~-----~~v~ 108 (216)
+.+++.++.+ .+++ |+.+||... .+.+.+++ ..+.+. .++ ...+ ..++
T Consensus 11 ~~~~~~~~~~-~vv~-f~a~~C~~C~~~~~~l~~~~---~~~~~v--------------~v~-----~~~~~~~~~~~l~ 66 (116)
T 2e7p_A 11 KKAKELASSA-PVVV-FSKTYCGYCNRVKQLLTQVG---ASYKVV--------------ELD-----ELSDGSQLQSALA 66 (116)
T ss_dssp HHHHHHHTSS-SEEE-EECTTCHHHHHHHHHHHHHT---CCCEEE--------------EGG-----GSTTHHHHHHHHH
T ss_pred HHHHHHHcCC-CEEE-EECCCChhHHHHHHHHHHcC---CCeEEE--------------Ecc-----CCCChHHHHHHHH
Confidence 3445566554 4555 889998544 33444433 234444 222 2222 3578
Q ss_pred HhcCCCC-CeE
Q psy7942 109 AEYSVDD-DTV 118 (216)
Q Consensus 109 ~~~~v~~-p~i 118 (216)
+.+++.. |++
T Consensus 67 ~~~~v~~~Pt~ 77 (116)
T 2e7p_A 67 HWTGRGTVPNV 77 (116)
T ss_dssp HHHSCCSSCEE
T ss_pred HHhCCCCcCEE
Confidence 8899975 999
No 267
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=81.29 E-value=1.6 Score=28.00 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=33.0
Q ss_pred eEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 172 HLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 172 ~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.++.|...+.+........++++++++.+++.++.+|...
T Consensus 4 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~ 43 (85)
T 1nho_A 4 NIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV 43 (85)
T ss_dssp CEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT
T ss_pred EEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 4667888888888889999999999999888888887643
No 268
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=80.99 E-value=4 Score=33.10 Aligned_cols=59 Identities=8% Similarity=0.090 Sum_probs=44.0
Q ss_pred CCceeee-CcchHHHhhcc--CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 150 LPLVVEF-NHETAQKIFGG--EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 150 ~P~v~~~-~~~~~~~~~~~--~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+..|.++ +.+++...... .-.+.++.|+..+++.+......|.++|++|.+ +.|+.+|.
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~ 172 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKA 172 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEH
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeC
Confidence 4467788 67788776642 113445558888888899999999999999985 88887764
No 269
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=80.09 E-value=3.1 Score=28.69 Aligned_cols=56 Identities=11% Similarity=0.100 Sum_probs=38.2
Q ss_pred eeeC-cchHHHhhcc-CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 154 VEFN-HETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 154 ~~~~-~~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
.+++ .+++...+.. +-++.++-|..++.+........+.++|+.+.+ +.|+.+|..
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d 60 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVD 60 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETT
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecc
Confidence 4454 3566665543 213334448888888889999999999999874 667776643
No 270
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=78.86 E-value=4 Score=33.00 Aligned_cols=53 Identities=13% Similarity=0.050 Sum_probs=40.7
Q ss_pred CceeeeCcchHHHhhccCCcceEEEEEe--CCccchhhhhHHHHHHHHhcc--CceEEEEcC
Q psy7942 151 PLVVEFNHETAQKIFGGEIKSHLLVFFS--KAAGHYESHFEPVQTVAKDFR--EKEEQDEDD 208 (216)
Q Consensus 151 P~v~~~~~~~~~~~~~~~~~~~lllf~~--~~~~~~~~~~~~l~~vA~~~r--~~~~f~~~d 208 (216)
..+.+++.+++..+...+ ++.++.|+. ++++ +...+.++|+++. +++.|..+|
T Consensus 5 ~~v~~Lt~~nF~~~i~~~-~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVD 61 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKS-KFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVG 61 (240)
T ss_dssp TTCEECCTTHHHHHGGGC-SEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred CCceECCHHHHHHHHcCC-CCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEe
Confidence 457889999998877654 344555776 6654 8899999999997 469999988
No 271
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=78.51 E-value=4 Score=33.23 Aligned_cols=55 Identities=11% Similarity=-0.014 Sum_probs=41.1
Q ss_pred CCceeeeCcchHHHhhccCCcceEEEEE--eCCccchhhhhHHHHHHHHhcc---CceEEEEcCC
Q psy7942 150 LPLVVEFNHETAQKIFGGEIKSHLLVFF--SKAAGHYESHFEPVQTVAKDFR---EKEEQDEDDD 209 (216)
Q Consensus 150 ~P~v~~~~~~~~~~~~~~~~~~~lllf~--~~~~~~~~~~~~~l~~vA~~~r---~~~~f~~~d~ 209 (216)
.+.+..++..++..+...+ ...++.|+ .++++ +...+.++|++|. +++.|..+|.
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~-~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~ 74 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERF-PYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGV 74 (248)
T ss_dssp CTTCEECCTTTHHHHHTTS-SEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred CCCcEECCHHHHHHHHhcC-CCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEEC
Confidence 3457889999998877654 34455587 67754 8899999999995 4788888873
No 272
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=76.58 E-value=3.2 Score=32.31 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=54.6
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCccccc-CCCC---------CHHHHHHHHhhcCCCceee-eC-cchHHHhhc-cCCc
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYE-GPAS---------DEAALRKFLSTQSLPLVVE-FN-HETAQKIFG-GEIK 170 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~-G~~~---------~~~~l~~fi~~~~~P~v~~-~~-~~~~~~~~~-~~~~ 170 (216)
...+..+|+.+ |++++- +... .. +.+. +..++..++.....|.-.. +. ..++..+-. ..-+
T Consensus 40 ~~~a~~~gi~gvP~fvin----gk~~-~~~~~~~~~~~~~f~~~~~~l~~~L~s~~~p~~~~~~~~g~~y~~l~~p~~~~ 114 (197)
T 1un2_A 40 EKAAADVQLRGVPAMFVN----GKYQ-LNPQGMDTSNMDVFVQQYADTVKYLSEKKGGGTGAQYEDGKQYTTLEKPVAGA 114 (197)
T ss_dssp HHHHHHTTCCSSSEEEET----TTEE-ECGGGSCCSSHHHHHHHHHHHHHHHTC---------CCBTTTEEECSSCCTTC
T ss_pred HHHHHHcCCCcCCEEEEc----ceEe-cCccccccccHHHHHHHHHHHHHHHHhCcccccccccCCCCCceEccCCCCCC
Confidence 34577899987 999771 2111 11 1120 1223666666555544321 11 123332211 1112
Q ss_pred ceEEEEEeCCccchhhhhHHH---HHHHHhccCceEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPV---QTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l---~~vA~~~r~~~~f~~~d~ 209 (216)
+.++-|++.+++++..+...| .++++++.+++.|..++.
T Consensus 115 ~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v 156 (197)
T 1un2_A 115 PQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHV 156 (197)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEEC
T ss_pred CEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEecc
Confidence 345569999998888888887 999999998887766654
No 273
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=73.65 E-value=1.7 Score=30.42 Aligned_cols=58 Identities=14% Similarity=0.061 Sum_probs=39.8
Q ss_pred ceeeeC-cchHHHhhcc----CCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCC
Q psy7942 152 LVVEFN-HETAQKIFGG----EIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~-~~~~~~~~~~----~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~ 211 (216)
.+.+++ .+++...+.. + ++.++.|...++..+......+.+++++|+ ++.|+.+|...
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~-~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~ 77 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAG-KVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDE 77 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTT-CBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTT
T ss_pred ceEEcCCHHHHHHHHHHHhhcC-CEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccc
Confidence 455553 4556555543 3 344666777777778888899999999997 68888877543
No 274
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=73.37 E-value=4.7 Score=28.71 Aligned_cols=58 Identities=10% Similarity=0.079 Sum_probs=40.0
Q ss_pred CceeeeCc-chHHHhhccCC-cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 151 PLVVEFNH-ETAQKIFGGEI-KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 151 P~v~~~~~-~~~~~~~~~~~-~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
..+.+++. +++..++.... ++.++.|...+++.+......+.++++++ ++.|+.+|..
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~ 79 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD 79 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc
Confidence 34667764 67777666432 24455688888888888888899998887 5777777654
No 275
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=72.71 E-value=9.8 Score=27.63 Aligned_cols=102 Identities=12% Similarity=0.068 Sum_probs=54.0
Q ss_pred CCCeEEEEEecCCChh-H---HHHHHHHHhhCC-----CceE-Eec----chhhHHHHhhhhcccc-ceeeeccc---HH
Q psy7942 45 DSKVVVAGLFKDASSE-L---AKTFNEIASKVD-----DLVF-DAS----SELAKTFNEIASKVDD-LVFVTSTN---AD 106 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~-~---~~~f~~~A~~~~-----~~~F-~~~----~~~~~~~~~~~~~~~~-~~~~~t~~---~~ 106 (216)
..++++|.|+..||.. . .+.+.++..++. ++.| +++ +.......+.+.+.+- ..++...+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4678999999999864 3 556777777763 4544 322 1122233333333321 11111111 35
Q ss_pred HHHhcCC---------------C-CCeEEEEecCCCCcccccCCC-CCHHHHHHHHhh
Q psy7942 107 ILAEYSV---------------D-DDTVAIFKKFDEGRVNYEGPA-SDEAALRKFLST 147 (216)
Q Consensus 107 v~~~~~v---------------~-~p~i~~~~~~de~~~~y~G~~-~~~~~l~~fi~~ 147 (216)
+++.|++ . .|+++++. ...-...|.|.. .+.+.|.++|+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 6667664 2 38888887 322223344431 156778887765
No 276
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=72.68 E-value=7.5 Score=27.43 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=39.0
Q ss_pred eeeeC-cchHHHhhc----cCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 153 VVEFN-HETAQKIFG----GEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 153 v~~~~-~~~~~~~~~----~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+.+++ .+++...+. .+ ++.++.|...+.+........+.+++++|. ++.|+.+|..
T Consensus 26 ~~~i~~~~~~~~~~~~~~~~~-k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~ 86 (139)
T 3d22_A 26 VHLITTKERWDQKLSEASRDG-KIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD 86 (139)
T ss_dssp CEEECSHHHHHHHHHHHHHHT-CCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT
T ss_pred EEEeCCHHHHHHHHHHHhhcC-CEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCc
Confidence 44443 556655443 23 345666888888888889999999999995 5888777654
No 277
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=73.94 E-value=0.83 Score=32.54 Aligned_cols=28 Identities=7% Similarity=0.103 Sum_probs=18.0
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
+.++++|.|+.+||. ...+.+.+++.++
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~ 55 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSEL 55 (143)
Confidence 333888888888874 3445566666555
No 278
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=70.52 E-value=4.4 Score=26.04 Aligned_cols=52 Identities=8% Similarity=0.066 Sum_probs=30.4
Q ss_pred EEEEecCCCh---hHHHHHHHHHhhC-CCceEEecchhhHHHHhhhhccccceeeec-ccHHHHHhcCCCC-CeEEE
Q psy7942 50 VAGLFKDASS---ELAKTFNEIASKV-DDLVFDASSELAKTFNEIASKVDDLVFVTS-TNADILAEYSVDD-DTVAI 120 (216)
Q Consensus 50 ~V~f~~~~~~---~~~~~f~~~A~~~-~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t-~~~~v~~~~~v~~-p~i~~ 120 (216)
++.|+.+||. ...+.+.+++.++ .++.+. .++ .. .+.++++++++.. |++++
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~--------------~v~-----~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIV--------------HLG-----TDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEE--------------ETT-----TCSSTHHHHHHHTCCEEEEEEE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEE--------------Eec-----CChhhHHHHHHcCCCcCCEEEE
Confidence 4446778874 3344555555554 234444 222 11 3567888999875 99877
No 279
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=70.21 E-value=11 Score=27.18 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=52.9
Q ss_pred CCeEEEEEe-cCCChh---HHHHHHHHHhhC--CCceE-EecchhhHHHHhhhhcccc-ceeeecc--cHHHHHhcCCC-
Q psy7942 46 SKVVVAGLF-KDASSE---LAKTFNEIASKV--DDLVF-DASSELAKTFNEIASKVDD-LVFVTST--NADILAEYSVD- 114 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~~---~~~~f~~~A~~~--~~~~F-~~~~~~~~~~~~~~~~~~~-~~~~~t~--~~~v~~~~~v~- 114 (216)
.++++|.|+ ..||.. ..+.+.+++.++ .++.+ +++-...+...+.+.+.+- .-++... +..+++.|++.
T Consensus 36 k~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~ 115 (160)
T 1xvw_A 36 AKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFN 115 (160)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEE
T ss_pred CCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCcc
Confidence 348888887 888854 455666666666 23443 3322222233333333221 1111221 56788999986
Q ss_pred ---C-C--eEEEEecCCCCcccccCCCC---CHHHHHHHHhh
Q psy7942 115 ---D-D--TVAIFKKFDEGRVNYEGPAS---DEAALRKFLST 147 (216)
Q Consensus 115 ---~-p--~i~~~~~~de~~~~y~G~~~---~~~~l~~fi~~ 147 (216)
+ | +++++-+...-...+.|... ..+.|.+.|+.
T Consensus 116 ~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 116 EQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred ccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4 6 67766542222223445431 45666666654
No 280
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=69.06 E-value=10 Score=24.12 Aligned_cols=70 Identities=10% Similarity=0.177 Sum_probs=40.2
Q ss_pred EEEEecCCCh---hHHHHHHHHHhhCCCceEEecchhhHHHHhhhhccccceeeeccc----HHHHHhcC--CC-CCeEE
Q psy7942 50 VAGLFKDASS---ELAKTFNEIASKVDDLVFDASSELAKTFNEIASKVDDLVFVTSTN----ADILAEYS--VD-DDTVA 119 (216)
Q Consensus 50 ~V~f~~~~~~---~~~~~f~~~A~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~----~~v~~~~~--v~-~p~i~ 119 (216)
++.|+.++|. ...+.+.+++..+..+.|. .+| ...+ +++.+.++ +. .|+|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~i~~~--------------~vd-----i~~~~~~~~~l~~~~~~~~~~vP~i~ 63 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQ--------------YVD-----IRAEGITKEDLQQKAGKPVETVPQIF 63 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSSCEEE--------------EEC-----HHHHTCCSHHHHHHTCCCSCCSCEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCCceEE--------------EEe-----cccChHHHHHHHHHhCCCCceeCeEE
Confidence 4557778873 4455666777665566665 222 2222 36888888 55 49983
Q ss_pred EEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 120 IFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 120 ~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
.+ + ..+ |.. +.|.+|+..+
T Consensus 64 --~~--g-~~i--~~~---~~l~~~~~~~ 82 (85)
T 1ego_A 64 --VD--Q-QHI--GGY---TDFAAWVKEN 82 (85)
T ss_dssp --ET--T-EEE--ESS---HHHHHHHHHH
T ss_pred --EC--C-EEE--ECH---HHHHHHHHHh
Confidence 32 2 222 223 5688877653
No 281
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=68.40 E-value=32 Score=25.13 Aligned_cols=36 Identities=6% Similarity=0.219 Sum_probs=26.8
Q ss_pred HHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 105 ADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 105 ~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
...+.++++.+ |++++ ++ ..+.|.. +.+.|.++|..
T Consensus 134 ~~~a~~~gv~gtPt~~i----~g--~~~~G~~-~~~~l~~~i~~ 170 (175)
T 3gyk_A 134 MALAQKLGFNGTPSFVV----ED--ALVPGFV-EQSQLQDAVDR 170 (175)
T ss_dssp HHHHHHHTCCSSSEEEE----TT--EEECSCC-CHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE----CC--EEeeCCC-CHHHHHHHHHH
Confidence 34567889987 99987 22 2567887 88999988865
No 282
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=68.19 E-value=25 Score=26.24 Aligned_cols=28 Identities=7% Similarity=-0.077 Sum_probs=20.9
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.++..++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~ 77 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKY 77 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHH
Confidence 457889999999985 4466777777766
No 283
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=68.17 E-value=8.6 Score=26.92 Aligned_cols=41 Identities=12% Similarity=0.176 Sum_probs=32.6
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
++.++.|....++.+......|.+++++|++++.++.++..
T Consensus 30 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~ 70 (148)
T 2b5x_A 30 KPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMP 70 (148)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECC
T ss_pred CEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcC
Confidence 35566788888888888999999999999987877777643
No 284
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=66.78 E-value=22 Score=26.68 Aligned_cols=105 Identities=11% Similarity=0.099 Sum_probs=58.2
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhC-C-CceE-Eecc---hhhHHHHhhhhcccc--ceeeecccHHHHHhcCC
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKV-D-DLVF-DASS---ELAKTFNEIASKVDD--LVFVTSTNADILAEYSV 113 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~-~-~~~F-~~~~---~~~~~~~~~~~~~~~--~~~~~t~~~~v~~~~~v 113 (216)
.++++|.|+ ..|| ....+.+.++..++ + ++.+ +++- +..+.|-+-...+.. .-++...+..+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 578888898 8886 45566777777666 2 3443 2222 223333332211111 11112235678899998
Q ss_pred C-----C-CeEEEEecCCCCcccccCCC---CCHHHHHHHHhhcCC
Q psy7942 114 D-----D-DTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQSL 150 (216)
Q Consensus 114 ~-----~-p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~~~ 150 (216)
. . |+++++.+...-...+.|.. .+.+.|.++|.....
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 170 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQS 170 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHHC
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 6 4 99988864222122333432 167888888887543
No 285
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=65.21 E-value=22 Score=26.46 Aligned_cols=102 Identities=12% Similarity=0.124 Sum_probs=54.8
Q ss_pred CCCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCceE-Eecc---hhhHHHHhhhh---ccccceeeecccHHHHHhc
Q psy7942 45 DSKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLVF-DASS---ELAKTFNEIAS---KVDDLVFVTSTNADILAEY 111 (216)
Q Consensus 45 ~~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~F-~~~~---~~~~~~~~~~~---~~~~~~~~~t~~~~v~~~~ 111 (216)
..++++|.|+ ..|| ....+.+.+++.++ .++.+ +++- +..+.|-+-.. .+. .-.+...+..+++.|
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~ 108 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIE-YIMIGDPSQTISRQF 108 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCC-SEEEECTTCHHHHHT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCC-ceEEECCchHHHHHh
Confidence 3578888898 7876 45677777777766 24443 2222 12233332111 111 111122356788999
Q ss_pred CCC-------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhh
Q psy7942 112 SVD-------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLST 147 (216)
Q Consensus 112 ~v~-------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~ 147 (216)
++. .|+++++.+...-...+.|.. .+.+.|.+.|+.
T Consensus 109 ~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 109 DVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp TCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred CCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 986 499998864222122334432 145667777654
No 286
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=64.44 E-value=12 Score=28.27 Aligned_cols=102 Identities=12% Similarity=0.136 Sum_probs=54.7
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCceE-Eecc---hhhHHHHhhh------hccccceeeecccHHHHH
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLVF-DASS---ELAKTFNEIA------SKVDDLVFVTSTNADILA 109 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~F-~~~~---~~~~~~~~~~------~~~~~~~~~~t~~~~v~~ 109 (216)
+++++|.|+ ..|| ....+.+.++..++ .++.+ +++- +..+.|.+-. ..+. .-++...+.++++
T Consensus 33 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~ 111 (198)
T 1zof_A 33 KNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVS-FPMVADITKSISR 111 (198)
T ss_dssp SSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCS-SCEEECTTSHHHH
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCce-eEEEECCchHHHH
Confidence 468888888 7776 45567777777665 23432 3222 1222232210 0111 1111223567899
Q ss_pred hcCCC------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhhc
Q psy7942 110 EYSVD------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 110 ~~~v~------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~ 148 (216)
.|++. .|+++++.+...-...+.|.. .+.+.|.+.|...
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99985 498888875222222334432 1567788887754
No 287
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=64.10 E-value=4.7 Score=28.80 Aligned_cols=58 Identities=9% Similarity=0.105 Sum_probs=39.6
Q ss_pred eeeC-cchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCCCCcc
Q psy7942 154 VEFN-HETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQPKRD 214 (216)
Q Consensus 154 ~~~~-~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~~~~~ 214 (216)
.+++ .+.+..+++.+ ++.++.|....++.+......+.+.+++ +++.|+.+|.+.-|+
T Consensus 9 ~~i~s~e~f~~ii~~~-~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~ 67 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEEN-KYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERD 67 (112)
T ss_dssp EECCSHHHHHHHHHHC-SEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHH
T ss_pred eecCCHHHHHHHHhcC-CCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCch
Confidence 4454 34566677654 3334445566777778888899999885 678888888776664
No 288
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=63.81 E-value=21 Score=26.41 Aligned_cols=28 Identities=4% Similarity=0.002 Sum_probs=21.0
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.++..++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~ 76 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARY 76 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHH
Confidence 467899999999984 4456777777766
No 289
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=63.31 E-value=8.3 Score=34.44 Aligned_cols=60 Identities=8% Similarity=0.150 Sum_probs=45.8
Q ss_pred ceeeeCcchHHHhhccCC-cceEEEEEeCCccchhhhhHHHHHHHHhcc---C-----ceEEEEcCCCC
Q psy7942 152 LVVEFNHETAQKIFGGEI-KSHLLVFFSKAAGHYESHFEPVQTVAKDFR---E-----KEEQDEDDDQP 211 (216)
Q Consensus 152 ~v~~~~~~~~~~~~~~~~-~~~lllf~~~~~~~~~~~~~~l~~vA~~~r---~-----~~~f~~~d~~~ 211 (216)
.+.+++.+++..+..... ++.++.|+....+....+...+.++|++|. + ++.|+.+|...
T Consensus 24 ~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~ 92 (470)
T 3qcp_A 24 SVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS 92 (470)
T ss_dssp TEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT
T ss_pred CcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC
Confidence 578888888887665321 244666888888888999999999999997 3 58888887543
No 290
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=62.14 E-value=15 Score=22.69 Aligned_cols=34 Identities=6% Similarity=0.101 Sum_probs=28.7
Q ss_pred EEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 175 VFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 175 lf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
.|+..+.+........+.++++++.+++.++.+|
T Consensus 5 ~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~ 38 (77)
T 1ilo_A 5 QIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK 38 (77)
T ss_dssp EEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec
Confidence 4666677778889999999999999889888887
No 291
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=60.79 E-value=30 Score=24.77 Aligned_cols=28 Identities=14% Similarity=0.107 Sum_probs=21.0
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.+++.++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~ 61 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKY 61 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHh
Confidence 467899999999984 4456777777766
No 292
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=60.16 E-value=6.7 Score=27.47 Aligned_cols=40 Identities=18% Similarity=0.043 Sum_probs=32.7
Q ss_pred cceEEEEEeCCccchhhhhHHHH--HHHHhccCceEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQ--TVAKDFREKEEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~--~vA~~~r~~~~f~~~d~ 209 (216)
++.++.|...+++.+......|. ++++.+.+++.++.+|.
T Consensus 30 k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~ 71 (133)
T 3fk8_A 30 KPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDV 71 (133)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEEC
T ss_pred CcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeC
Confidence 34566688888888888888999 99999988899988876
No 293
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=59.37 E-value=13 Score=25.75 Aligned_cols=41 Identities=7% Similarity=0.065 Sum_probs=31.6
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhcc-CceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFR-EKEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r-~~~~f~~~d~~ 210 (216)
++.++.|....++.+......|.+++++|+ +++.++.++..
T Consensus 35 k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d 76 (145)
T 3erw_A 35 QKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV 76 (145)
T ss_dssp SEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc
Confidence 345666888888888889999999999998 56777766543
No 294
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=58.86 E-value=12 Score=25.54 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=30.3
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+.++.|....++.+......|.++++++. ++.++.++.
T Consensus 27 ~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~ 64 (136)
T 1zzo_A 27 PAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAG 64 (136)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEEC
T ss_pred eEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeC
Confidence 45666888888888889999999999998 777766664
No 295
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=58.42 E-value=14 Score=26.40 Aligned_cols=59 Identities=10% Similarity=0.107 Sum_probs=36.8
Q ss_pred hhcCCCceee--eC-cchHHHhhccCCcceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 146 STQSLPLVVE--FN-HETAQKIFGGEIKSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 146 ~~~~~P~v~~--~~-~~~~~~~~~~~~~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
++.+.|.... ++ .+.+..+.+.. ...++.|+.... ....+.+.++|+.+ +.+.|..++.
T Consensus 14 ~kq~gP~~~~~~i~s~~e~e~fi~~~-~v~VVGfF~~~~---~~~~~~F~~~A~~~-~d~~F~~t~~ 75 (124)
T 2l4c_A 14 SDGPGAAQEPTWLTDVPAAMEFIAAT-EVAVIGFFQDLE---IPAVPILHSMVQKF-PGVSFGISTD 75 (124)
T ss_dssp CCCSCCSCCCEECCSHHHHHHHHHTS-SEEEEEECSCTT---STHHHHHHHHHHHC-TTSEEEEECC
T ss_pred HhccCCCCcceEcCCHHHHHHHHhcC-CCEEEEEECCCC---ChhHHHHHHHHHhC-CCceEEEECh
Confidence 3445565544 64 34566666654 345555765432 23367899999999 8899977743
No 296
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=56.91 E-value=43 Score=24.91 Aligned_cols=104 Identities=8% Similarity=0.110 Sum_probs=55.6
Q ss_pred CCCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhh---cccc--ceeeecccHHHHH
Q psy7942 45 DSKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIAS---KVDD--LVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~---~~~~--~~~~~t~~~~v~~ 109 (216)
..++++|.|+ .+|| ......+.+++.++ .++.+ ++|-. ..+.|-+-.. .++. .-++...+.++++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3467888888 7775 45667777777766 34443 33222 2233332111 0111 1122333567899
Q ss_pred hcCCC------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhhc
Q psy7942 110 EYSVD------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 110 ~~~v~------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~ 148 (216)
.|++. .|+++++.+...-...+.|.. .+.+.|.+.|...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 99987 499999864222122233432 1567777777643
No 297
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=55.99 E-value=18 Score=25.45 Aligned_cols=41 Identities=5% Similarity=0.045 Sum_probs=31.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~~ 211 (216)
+.++.|...+++.+......|.+++++|.++ +.++.++..+
T Consensus 32 ~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~ 73 (152)
T 2lja_A 32 YIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDK 73 (152)
T ss_dssp EEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCS
T ss_pred EEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccC
Confidence 4455677777777888899999999999875 7777665443
No 298
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=55.74 E-value=17 Score=24.83 Aligned_cols=39 Identities=13% Similarity=0.024 Sum_probs=30.5
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
++.++.|...+++.+......|.++++++. ++.++.++.
T Consensus 25 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~ 63 (136)
T 1lu4_A 25 KPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIAT 63 (136)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEEC
T ss_pred CEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEc
Confidence 345666888778778889999999999998 777766654
No 299
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=55.56 E-value=51 Score=25.31 Aligned_cols=101 Identities=9% Similarity=0.143 Sum_probs=54.6
Q ss_pred CCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhh---cccc--ceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDASS---ELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIAS---KVDD--LVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~---~~~~--~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ .+||. .....+.+++.++ .++.+ ++|-. ..+.|-+... .+.. .-++...+.++++.
T Consensus 52 gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 131 (213)
T 2i81_A 52 KKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKD 131 (213)
T ss_dssp TCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHH
Confidence 467888888 78874 4455666666666 34443 33322 2333333111 0111 11223345678999
Q ss_pred cCCC------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhhc
Q psy7942 111 YSVD------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 111 ~~v~------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~~ 148 (216)
|++. .|+++++-+ ++.+.+ .|+. .+.+.|.+.|...
T Consensus 132 ygv~~~~g~~~p~~~lID~--~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 132 YNVLFDDSVSLRAFVLIDM--NGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp TTCEETTTEECEEEEEECT--TSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hCCccccCCcccEEEEECC--CCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 9986 488887764 223333 2322 1577888877653
No 300
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=55.31 E-value=28 Score=25.38 Aligned_cols=28 Identities=14% Similarity=0.080 Sum_probs=20.5
Q ss_pred CCCeEEEEEecCCChh--HHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASSE--LAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~--~~~~f~~~A~~~ 72 (216)
..++++|.|+..||.. ..+.+.++..++
T Consensus 31 ~Gk~vll~F~a~wC~~C~~~~~l~~l~~~~ 60 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTPQYKELEALYKRY 60 (171)
T ss_dssp TTCEEEEEEEESSSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCcchhHHHHHHHHHHh
Confidence 4678899999998732 566777777766
No 301
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=55.12 E-value=54 Score=24.49 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=55.5
Q ss_pred CCCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhhc---ccc--ceeeecccHHHHH
Q psy7942 45 DSKVVVAGLF-KDASS---ELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIASK---VDD--LVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~~---~~~--~~~~~t~~~~v~~ 109 (216)
..++++|.|+ .+||. .....+.+++.++ .++.+ ++|-. ..+.|-+.... +.. .-++...+.++++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578888898 88874 3455666666666 34443 33222 23333332110 001 1111233557899
Q ss_pred hcCCC-------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhhc
Q psy7942 110 EYSVD-------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 110 ~~~v~-------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~ 148 (216)
.|++. .|+++++-+...-...+.|.. .+.+.+.++|...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 99986 488887764222122233432 1578888888764
No 302
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=54.76 E-value=20 Score=25.29 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=31.1
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~ 210 (216)
++.++.|....++.+......|.+++++|+++ +.++.++..
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 70 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD 70 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 34556688777777888899999999999886 766665543
No 303
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=54.57 E-value=19 Score=26.95 Aligned_cols=38 Identities=11% Similarity=-0.067 Sum_probs=29.7
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
++.++.|...+++.+......|.++++++. ++.++.+|
T Consensus 55 k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~ 92 (167)
T 1z6n_A 55 RYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIIS 92 (167)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEEC
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEE
Confidence 344556888888888999999999999986 57676665
No 304
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=54.20 E-value=44 Score=23.81 Aligned_cols=28 Identities=7% Similarity=0.099 Sum_probs=20.9
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.++..++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~ 60 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRL 60 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHh
Confidence 467899999999985 4456777777766
No 305
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=53.58 E-value=58 Score=23.21 Aligned_cols=78 Identities=14% Similarity=0.274 Sum_probs=39.4
Q ss_pred HHHhHhCCCeEEEEEe-cCCCh---hHHHHHHHHHhhCC--CceEEecchhhHHHHhhhhccc-cceeeecccHHHHHhc
Q psy7942 39 IKAFIADSKVVVAGLF-KDASS---ELAKTFNEIASKVD--DLVFDASSELAKTFNEIASKVD-DLVFVTSTNADILAEY 111 (216)
Q Consensus 39 ~~~~~~~~~v~~V~f~-~~~~~---~~~~~f~~~A~~~~--~~~F~~~~~~~~~~~~~~~~~~-~~~~~~t~~~~v~~~~ 111 (216)
+.++....++++|.|+ ..||. ...+.+.++..++. .-..+++-.......+.+.+.+ +.-++...+.++++.|
T Consensus 28 l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~ 107 (159)
T 2a4v_A 28 LKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLL 107 (159)
T ss_dssp HHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHH
T ss_pred HHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHh
Confidence 3445444557778776 67774 44556666666652 2234443322222222222222 1222233455788999
Q ss_pred CCCC-C
Q psy7942 112 SVDD-D 116 (216)
Q Consensus 112 ~v~~-p 116 (216)
++.. |
T Consensus 108 gv~~~p 113 (159)
T 2a4v_A 108 GAKKTP 113 (159)
T ss_dssp TCBSSS
T ss_pred CCcccc
Confidence 9864 6
No 306
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=53.29 E-value=60 Score=23.78 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=21.4
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.++..++
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 67 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEF 67 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHh
Confidence 467999999999985 4456777777777
No 307
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=52.79 E-value=64 Score=24.85 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=55.9
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhhc---ccc--ceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIASK---VDD--LVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~~---~~~--~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ .+|| ......+.+++.++ .++.+ ++|-. ..++|-+.... +.. .-++...+.++++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478888898 7776 45667777777776 34443 33222 23334332100 011 11223335678999
Q ss_pred cCCC-------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhhc
Q psy7942 111 YSVD-------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 111 ~~v~-------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~~ 148 (216)
|++. .|+++++.+ ++.+.+ .|+. .+.++|.+.|...
T Consensus 136 ygv~~~~~g~~~P~~~liD~--~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDP--NGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp TTCEETTTTEECEEEEEECT--TSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECC--CCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 9985 389998864 223333 3432 1567777777643
No 308
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=52.61 E-value=23 Score=25.43 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=31.2
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
++.++.|...+++.+......|.+++++|+ ++.++.++.
T Consensus 38 k~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~ 76 (165)
T 3ha9_A 38 DVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDF 76 (165)
T ss_dssp SEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEEC
T ss_pred CEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEe
Confidence 345666888888888899999999999999 777766654
No 309
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=52.59 E-value=20 Score=25.59 Aligned_cols=40 Identities=15% Similarity=0.096 Sum_probs=30.9
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
++.++.|....++.+......|.+++++|+++ +.++.++.
T Consensus 35 k~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~ 75 (165)
T 3or5_A 35 KAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAV 75 (165)
T ss_dssp CEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 34566688888888888999999999999886 77766554
No 310
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=52.06 E-value=21 Score=24.85 Aligned_cols=40 Identities=13% Similarity=0.082 Sum_probs=30.5
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhc-cCc-eEEEEcCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDF-REK-EEQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~-r~~-~~f~~~d~~ 210 (216)
+.++.|....++.+...+..|.+++++| .++ +.++.++..
T Consensus 35 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d 76 (148)
T 3fkf_A 35 YLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLD 76 (148)
T ss_dssp EEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECC
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECC
Confidence 4566688777777888999999999999 765 777666543
No 311
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=51.49 E-value=69 Score=23.49 Aligned_cols=28 Identities=4% Similarity=0.108 Sum_probs=21.2
Q ss_pred CCCeEEEEEecCCCh---hHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDASS---ELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~---~~~~~f~~~A~~~ 72 (216)
..++++|.|+..||. ...+.+.+++.++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 78 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDL 78 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHh
Confidence 467899999999984 4456777777776
No 312
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=51.08 E-value=28 Score=24.63 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=30.4
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~ 210 (216)
+.++.|....++.+......|.+++++|.++ +.++.++..
T Consensus 31 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d 71 (152)
T 2lrn_A 31 YVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD 71 (152)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc
Confidence 4566688877777888899999999999875 766655443
No 313
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=51.07 E-value=18 Score=27.15 Aligned_cols=40 Identities=20% Similarity=0.105 Sum_probs=33.1
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
++.++.|.+..++.+..+...+.++++++.+++.|..++.
T Consensus 26 ~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~ 65 (195)
T 3hd5_A 26 KIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPI 65 (195)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEec
Confidence 3456779999888888899999999999998887776654
No 314
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=50.39 E-value=20 Score=25.67 Aligned_cols=41 Identities=10% Similarity=0.001 Sum_probs=30.9
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~~ 211 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-++..+
T Consensus 37 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~ 78 (152)
T 2lrt_A 37 VVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG 78 (152)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC
T ss_pred EEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC
Confidence 4466687777777788889999999999876 7666665443
No 315
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=49.43 E-value=29 Score=24.22 Aligned_cols=60 Identities=7% Similarity=-0.015 Sum_probs=37.7
Q ss_pred CCceeeeC-cchHHHhhcc-CCcceEEEEEeCCccchhhhhHHH---HHHHHhccCceEEEEcCCC
Q psy7942 150 LPLVVEFN-HETAQKIFGG-EIKSHLLVFFSKAAGHYESHFEPV---QTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 150 ~P~v~~~~-~~~~~~~~~~-~~~~~lllf~~~~~~~~~~~~~~l---~~vA~~~r~~~~f~~~d~~ 210 (216)
.|.+..++ .+++...+.. .-++.++.|...+++.+......+ .++++++++ +.++.+|..
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~ 74 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVT 74 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECT
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCC
Confidence 45555454 3444444432 113456668877777666666667 888888875 888887764
No 316
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=49.38 E-value=76 Score=24.59 Aligned_cols=101 Identities=14% Similarity=0.187 Sum_probs=56.0
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCce-EEecc---hhhHHHHhhhh---cccc--ceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLV-FDASS---ELAKTFNEIAS---KVDD--LVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~-F~~~~---~~~~~~~~~~~---~~~~--~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ ..|| ....+.+.++..++ ..+. .++|- +..++|-+... .++. .-++...+..+++.
T Consensus 56 Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 135 (221)
T 2c0d_A 56 QKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKN 135 (221)
T ss_dssp TCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHHH
Confidence 467888888 7776 45566677766665 3443 33333 22444544221 1111 22223345678999
Q ss_pred cCC------CCCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhhc
Q psy7942 111 YSV------DDDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 111 ~~v------~~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~~ 148 (216)
|++ ..|+.+++-+ ++.+.| .|+. .+.+.|.+.|+..
T Consensus 136 ygv~~~~g~~~P~~~lID~--~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 136 YNVLYDNSFALRGLFIIDK--NGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp TTCEETTTEECEEEEEECT--TSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred cCCcccCCCccceEEEECC--CCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 998 2588888874 233333 2321 1677888877653
No 317
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=49.21 E-value=20 Score=24.91 Aligned_cols=40 Identities=15% Similarity=0.160 Sum_probs=30.3
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~ 210 (216)
+.++.|....++.+......|.+++++|+++ +.++.++..
T Consensus 33 ~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 73 (148)
T 3hcz_A 33 YTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE 73 (148)
T ss_dssp EEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec
Confidence 4455677777777788899999999999886 777665543
No 318
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=48.86 E-value=28 Score=24.45 Aligned_cols=41 Identities=2% Similarity=-0.060 Sum_probs=30.2
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccC-ceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFRE-KEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~-~~~f~~~d~~ 210 (216)
++.++.|....++.+...+..|.+++++|++ .+.++.++..
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d 70 (154)
T 3kcm_A 29 QVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSID 70 (154)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECC
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcC
Confidence 3456668877777778889999999999987 4666555443
No 319
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=48.83 E-value=28 Score=24.88 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=31.6
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhcc-CceEEEEcCCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFR-EKEEQDEDDDQP 211 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r-~~~~f~~~d~~~ 211 (216)
++.++.|....++.+...+..|.+++++|. +.+.++.++..+
T Consensus 42 k~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 84 (158)
T 3hdc_A 42 KIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK 84 (158)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH
Confidence 345666887777777888999999999998 457777665543
No 320
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=48.59 E-value=41 Score=25.34 Aligned_cols=103 Identities=12% Similarity=0.078 Sum_probs=54.5
Q ss_pred CCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhh---cccc--ceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDASS---ELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIAS---KVDD--LVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~---~~~~--~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ .+||. .....+.+++.++ ..+.| ++|-. ..+.|-+-.. .+.. .-++...+.++++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578888888 88874 3455666666666 34443 33322 2333333110 0001 11112335678899
Q ss_pred cCCC------C-CeEEEEecCCCCcccccCCC---CCHHHHHHHHhhc
Q psy7942 111 YSVD------D-DTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 111 ~~v~------~-p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~ 148 (216)
|++. . |+++++.+...-...+.|.. .+.++|.+.|...
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 9986 3 88888864222122223432 1567888877654
No 321
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=47.77 E-value=30 Score=24.32 Aligned_cols=39 Identities=18% Similarity=0.200 Sum_probs=30.0
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
++.++.|....++.+......|.+++++|+++ +.++.+.
T Consensus 29 k~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 68 (153)
T 2l5o_A 29 KVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVA 68 (153)
T ss_dssp CEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEE
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEe
Confidence 34566688888888888999999999999875 6666554
No 322
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=47.16 E-value=27 Score=25.12 Aligned_cols=42 Identities=10% Similarity=0.031 Sum_probs=31.5
Q ss_pred ceEEEEEeCCccc-hhhhhHHHHHHHHhccC----ceEEEEcCCCCC
Q psy7942 171 SHLLVFFSKAAGH-YESHFEPVQTVAKDFRE----KEEQDEDDDQPK 212 (216)
Q Consensus 171 ~~lllf~~~~~~~-~~~~~~~l~~vA~~~r~----~~~f~~~d~~~~ 212 (216)
+.++.|....++. +...+..|.+++++|++ ++.++.+...+.
T Consensus 37 ~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 37 VVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred EEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 4455677888886 78889999999999984 577777665443
No 323
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=47.10 E-value=28 Score=24.83 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=29.4
Q ss_pred ceEEEEEeCCccc-hhhhhHHHHHHHHhccC-----ceEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGH-YESHFEPVQTVAKDFRE-----KEEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~-~~~~~~~l~~vA~~~r~-----~~~f~~~d~~~ 211 (216)
+.++.|....++. +...+..|.++.++|++ ++.++.+...+
T Consensus 25 ~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~ 71 (164)
T 2ggt_A 25 WLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDP 71 (164)
T ss_dssp EEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCT
T ss_pred EEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCC
Confidence 4455677778876 78888999999999864 56655554444
No 324
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=46.93 E-value=16 Score=25.12 Aligned_cols=55 Identities=16% Similarity=0.118 Sum_probs=34.6
Q ss_pred eeCcchHHHhhc----cCCcceEEEEEeCCccchhhhhHHH---HHHHHhccCceEEEEcCCC
Q psy7942 155 EFNHETAQKIFG----GEIKSHLLVFFSKAAGHYESHFEPV---QTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 155 ~~~~~~~~~~~~----~~~~~~lllf~~~~~~~~~~~~~~l---~~vA~~~r~~~~f~~~d~~ 210 (216)
.++..++...+. .+ ++.++.|....++.+......+ ..+++.+.+++.++.+|..
T Consensus 10 ~~~~~~~~~~~~~~~~~~-k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~ 71 (130)
T 2kuc_A 10 AFRELSFPEALKRAEVED-KLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDME 71 (130)
T ss_dssp CCBCCCHHHHHHHHHHHS-SCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSS
T ss_pred CcccCCHHHHHHHHHhcC-CeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecC
Confidence 345555544432 23 3456667777777777777777 6677776667778777754
No 325
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=45.96 E-value=31 Score=25.45 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=31.1
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~~ 210 (216)
+..++.|....++.+...+..|.+++++|++++.++.++..
T Consensus 34 k~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d 74 (188)
T 2cvb_A 34 PLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAN 74 (188)
T ss_dssp SEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECC
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcC
Confidence 34566688777777778889999999999887777666553
No 326
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=45.86 E-value=26 Score=25.66 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=32.7
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhc--cCceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDF--REKEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~--r~~~~f~~~d~~ 210 (216)
+..++.|.+..++.+..+...+.++.++| .+++.+++.++.
T Consensus 28 ~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 28 PVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 34567788988888888888888888999 788888887653
No 327
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=45.85 E-value=73 Score=23.91 Aligned_cols=102 Identities=9% Similarity=-0.034 Sum_probs=49.2
Q ss_pred CCCeEEEEEecCCChh-H---HHHHHHHHhhC-----CCce-EEecch----hhHHHHhhhhcccc-ceeeec---ccHH
Q psy7942 45 DSKVVVAGLFKDASSE-L---AKTFNEIASKV-----DDLV-FDASSE----LAKTFNEIASKVDD-LVFVTS---TNAD 106 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~-~---~~~f~~~A~~~-----~~~~-F~~~~~----~~~~~~~~~~~~~~-~~~~~t---~~~~ 106 (216)
..++++|.|+..||.. . ...+.++..++ +++. .++|-. ........+.+.+. ...+.. ....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3578899999999864 3 44555544333 2443 233211 33344444444432 111111 1245
Q ss_pred HHHhcCCC--CC---------------eEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 107 ILAEYSVD--DD---------------TVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 107 v~~~~~v~--~p---------------~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+++.|++. .| +++++-+...-...|.|.. +.+.+.+.|..
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~-~~~~~~~~i~~ 176 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNY-DEKTGVDKIVE 176 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTC-CTTHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCC-CHHHHHHHHHH
Confidence 77888875 23 5555554222233456665 54455555443
No 328
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=45.71 E-value=24 Score=23.86 Aligned_cols=37 Identities=11% Similarity=0.045 Sum_probs=30.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~ 207 (216)
+.++.|....++.+......|.++++++.+++.++.+
T Consensus 24 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i 60 (138)
T 4evm_A 24 KVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTV 60 (138)
T ss_dssp EEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEE
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 4455677777777888899999999998888888877
No 329
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=45.57 E-value=38 Score=24.28 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=29.6
Q ss_pred ceEEEEEeCCccc-hhhhhHHHHHHHHhcc-----CceEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGH-YESHFEPVQTVAKDFR-----EKEEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~-~~~~~~~l~~vA~~~r-----~~~~f~~~d~~~ 211 (216)
+.++.|....++. +...+..|.+++++|+ +++.++.+...+
T Consensus 28 ~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 28 WVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp EEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred EEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 4455577788876 8888999999999985 366665555444
No 330
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=51.12 E-value=4.5 Score=29.30 Aligned_cols=28 Identities=18% Similarity=0.026 Sum_probs=16.9
Q ss_pred CCCeEEEEEecCCChhH---HHHHHH-HHhhC
Q psy7942 45 DSKVVVAGLFKDASSEL---AKTFNE-IASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~~~~---~~~f~~-~A~~~ 72 (216)
.+++++|.|+.+||... .+.+.+ +..++
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~ 63 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKH 63 (159)
Confidence 45678888888887533 344544 44333
No 331
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=44.06 E-value=29 Score=24.22 Aligned_cols=38 Identities=11% Similarity=-0.067 Sum_probs=28.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccC--ceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFRE--KEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~--~~~f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|++ ++.++.++
T Consensus 30 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~ 69 (144)
T 1i5g_A 30 TVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLIS 69 (144)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Confidence 445568777777788889999999999984 56555544
No 332
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=43.89 E-value=1e+02 Score=23.53 Aligned_cols=100 Identities=10% Similarity=0.098 Sum_probs=54.9
Q ss_pred CCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCce-EEecch---hhHHHHhhhh---cccc--ceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDASS---ELAKTFNEIASKV--DDLV-FDASSE---LAKTFNEIAS---KVDD--LVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~~-F~~~~~---~~~~~~~~~~---~~~~--~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ ..||. .....+.++..++ ..+. .++|-. ..+.|-+... .++. .-++...+..+++.
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 568888888 88874 4455666666665 3443 343332 2344443221 0111 22223345678999
Q ss_pred cCCC-------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhh
Q psy7942 111 YSVD-------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLST 147 (216)
Q Consensus 111 ~~v~-------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~ 147 (216)
|++. .|+.+++-+ ++.+.+ .|+. .+.++|.+.|..
T Consensus 128 ygv~~~~~g~~~p~~~lID~--~G~I~~~~~g~~~~~~~~~ell~~l~~ 174 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDD--KGILRQITLNDLPVGRSVDETLRLVQA 174 (211)
T ss_dssp TTCEETTTTEECEEEEEECT--TSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred cCCcccCCCcccceEEEECC--CCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 9983 588888875 233333 2332 156777777765
No 333
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=43.87 E-value=96 Score=22.95 Aligned_cols=103 Identities=7% Similarity=0.062 Sum_probs=55.4
Q ss_pred CCeEEEEEec-CCCh---hHHHHHHHHHhhC--CCce-EEecc---hhhHHHHhhhhccccc--eeeecccHHHHHhcCC
Q psy7942 46 SKVVVAGLFK-DASS---ELAKTFNEIASKV--DDLV-FDASS---ELAKTFNEIASKVDDL--VFVTSTNADILAEYSV 113 (216)
Q Consensus 46 ~~v~~V~f~~-~~~~---~~~~~f~~~A~~~--~~~~-F~~~~---~~~~~~~~~~~~~~~~--~~~~t~~~~v~~~~~v 113 (216)
.++++|.|+. .||. ...+.+.++..++ ..+. +++|- +..+.|-+-...++.. -.+...+..+++.|++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 4678888885 7774 4456666666655 2343 34333 2234554432222222 2223345678899998
Q ss_pred C-------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhhc
Q psy7942 114 D-------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 114 ~-------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~~ 148 (216)
. .|+.+++.+...-...+.|+. .+.+.|.+.|+..
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 5 388888875222122233432 1567777777653
No 334
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=43.78 E-value=40 Score=23.67 Aligned_cols=39 Identities=13% Similarity=0.104 Sum_probs=29.8
Q ss_pred ceEEEEEeCCccc--hhhhhHHHHHHHHhc-cCc-eEEEEcCC
Q psy7942 171 SHLLVFFSKAAGH--YESHFEPVQTVAKDF-REK-EEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~--~~~~~~~l~~vA~~~-r~~-~~f~~~d~ 209 (216)
+.++.|....++. +...+..|.+++++| +++ +.++.+..
T Consensus 35 ~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~ 77 (150)
T 3fw2_A 35 SLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISL 77 (150)
T ss_dssp EEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred EEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEc
Confidence 4556688888888 888999999999999 665 66655543
No 335
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=43.63 E-value=30 Score=24.30 Aligned_cols=38 Identities=8% Similarity=-0.081 Sum_probs=28.2
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhcc--CceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFR--EKEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r--~~~~f~~~d 208 (216)
+.++.|....++.+......|.+++++|+ +++.++.++
T Consensus 30 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~ 69 (146)
T 1o8x_A 30 LVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCT 69 (146)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred EEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEe
Confidence 44556777777778888999999999998 355555443
No 336
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=43.51 E-value=87 Score=22.34 Aligned_cols=103 Identities=13% Similarity=0.105 Sum_probs=52.3
Q ss_pred CCCeEEEEEecCC-Ch---hHHHHHHHHHhhCCCceE-EecchhhHHHHhhhhccc--cceeeec-ccHHHHHhcCCCC-
Q psy7942 45 DSKVVVAGLFKDA-SS---ELAKTFNEIASKVDDLVF-DASSELAKTFNEIASKVD--DLVFVTS-TNADILAEYSVDD- 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~-~~---~~~~~f~~~A~~~~~~~F-~~~~~~~~~~~~~~~~~~--~~~~~~t-~~~~v~~~~~v~~- 115 (216)
..++++|.|+..| |. ...+.+.++..+++++.| +++-...+...+.+.+.+ ..-.+.. .+.++++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~ 122 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIK 122 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBT
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccc
Confidence 3568888899888 64 345667777766544443 222222222222222222 1111122 3457888898864
Q ss_pred ------CeEEEEecCCCCcccccCC-C---CCHHHHHHHHhh
Q psy7942 116 ------DTVAIFKKFDEGRVNYEGP-A---SDEAALRKFLST 147 (216)
Q Consensus 116 ------p~i~~~~~~de~~~~y~G~-~---~~~~~l~~fi~~ 147 (216)
|+.+++-+...-...+.|. . .+.+.|.+.|+.
T Consensus 123 ~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 123 ELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp TTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred cCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 8888776522212223331 1 134666666653
No 337
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=43.45 E-value=28 Score=24.48 Aligned_cols=39 Identities=15% Similarity=0.168 Sum_probs=29.4
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
+.++.|...+++.+......|.+++++|+++ +.++.++.
T Consensus 28 ~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~ 67 (151)
T 2f9s_A 28 GVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNV 67 (151)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 4566688878777888899999999999874 66655543
No 338
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=43.20 E-value=29 Score=21.84 Aligned_cols=36 Identities=6% Similarity=-0.034 Sum_probs=24.7
Q ss_pred EEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 173 LLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 173 lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+++|..++.+........|.+++.++++ +.|..+|.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi 38 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDI 38 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEec
Confidence 4456666667777788888888887664 66666553
No 339
>2od5_A Hypothetical protein; metagenomics, structural genomics, joint center for structur genomics, JCSG, protein structure initiative; HET: 1PE; 1.79A {Uncultured marine organism} SCOP: a.4.5.70
Probab=42.95 E-value=41 Score=23.21 Aligned_cols=40 Identities=15% Similarity=0.323 Sum_probs=32.3
Q ss_pred CCChHHHHHHHHhhhCCCceeecCHHHHHHhHh-CCCeEEEEEec
Q psy7942 12 GRTAEDIVNWLLKKTGPPAKEFTSVDEIKAFIA-DSKVVVAGLFK 55 (216)
Q Consensus 12 ~Rta~~iv~~l~~~~~~~v~~l~s~~~~~~~~~-~~~v~~V~f~~ 55 (216)
||...+|.+|+.+.+.+.. ..+++.++++ +.+++-||+..
T Consensus 28 prNT~EIleh~nstMrhgt----tpqqlgNvLskDkdIvkvgtvk 68 (116)
T 2od5_A 28 PRNTAEILEHINSTMRHGT----TSQQLGNVLSKDKDIVKVGYIK 68 (116)
T ss_dssp CEEHHHHHHHHHTSSSSCC----CHHHHHHHHHHCTTEEEEEEEE
T ss_pred CCcHHHHHHHHHhccCCCC----CHHHHhhHHhcccceeeEEEee
Confidence 4788899999999988763 5788888887 57788899864
No 340
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=42.05 E-value=1e+02 Score=23.46 Aligned_cols=81 Identities=11% Similarity=0.039 Sum_probs=0.0
Q ss_pred CCCeEEEEEecCCC---hhHHHHHHHHHhhC--CCceEEecchhhHHHHhhhhccccceeeeccc-------------HH
Q psy7942 45 DSKVVVAGLFKDAS---SELAKTFNEIASKV--DDLVFDASSELAKTFNEIASKVDDLVFVTSTN-------------AD 106 (216)
Q Consensus 45 ~~~v~~V~f~~~~~---~~~~~~f~~~A~~~--~~~~F~~~~~~~~~~~~~~~~~~~~~~~~t~~-------------~~ 106 (216)
..++++|.|+..|| ....+.+.++..++ ..+.+.. .+.+ +.
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~---------------------v~~d~~~~~e~d~~~~i~~ 104 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLG---------------------FPCNQFGHQENAKNEEILN 104 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEE---------------------EECCCSTTTTCSCHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEE---------------------EECCcccccCCCCHHHHHH
Q ss_pred HHH------hcCCCC------------------------------------------------------CeEEEEecCCC
Q psy7942 107 ILA------EYSVDD------------------------------------------------------DTVAIFKKFDE 126 (216)
Q Consensus 107 v~~------~~~v~~------------------------------------------------------p~i~~~~~~de 126 (216)
.++ +++++. |+..++-+...
T Consensus 105 f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~ 184 (208)
T 2f8a_A 105 SLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGV 184 (208)
T ss_dssp HHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSC
T ss_pred HHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCc
Q ss_pred CcccccCCCCCHHHHHHHHhh
Q psy7942 127 GRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 127 ~~~~y~G~~~~~~~l~~fi~~ 147 (216)
-...|.|.. +.+.|.+.|..
T Consensus 185 i~~~~~g~~-~~~~l~~~I~~ 204 (208)
T 2f8a_A 185 PLRRYSRRF-QTIDIEPDIEA 204 (208)
T ss_dssp EEEEECTTS-CGGGGHHHHHH
T ss_pred EEEEeCCCC-CHHHHHHHHHH
No 341
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=41.74 E-value=66 Score=21.11 Aligned_cols=22 Identities=18% Similarity=0.110 Sum_probs=14.0
Q ss_pred HHHHHhHhCCCeEEEEEecCCChh
Q psy7942 37 DEIKAFIADSKVVVAGLFKDASSE 60 (216)
Q Consensus 37 ~~~~~~~~~~~v~~V~f~~~~~~~ 60 (216)
+.+++.++.+.+ +.|+.++|..
T Consensus 3 ~~~~~~i~~~~v--~~f~~~~C~~ 24 (105)
T 1kte_A 3 AFVNSKIQPGKV--VVFIKPTCPF 24 (105)
T ss_dssp HHHHHHCCTTCE--EEEECSSCHH
T ss_pred hHHHhhcccCCE--EEEEcCCCHh
Confidence 566777766654 3367788853
No 342
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=41.56 E-value=61 Score=23.36 Aligned_cols=99 Identities=19% Similarity=0.321 Sum_probs=46.9
Q ss_pred CCeEEEEEe-cCCChh---HHHHHHHHHhhC--CCc-eEEecchhhHHHHhhhhccc-cceeeecccHHHHHhcCCC---
Q psy7942 46 SKVVVAGLF-KDASSE---LAKTFNEIASKV--DDL-VFDASSELAKTFNEIASKVD-DLVFVTSTNADILAEYSVD--- 114 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~~---~~~~f~~~A~~~--~~~-~F~~~~~~~~~~~~~~~~~~-~~~~~~t~~~~v~~~~~v~--- 114 (216)
.++++|.|+ ..||.. ....+.++..++ ..+ .+++|......-...+.+.+ +.-.+...+.++++.|++.
T Consensus 30 Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~~ 109 (157)
T 4g2e_A 30 GKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWEF 109 (157)
T ss_dssp TSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEEC
T ss_pred CCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCcccc
Confidence 456666666 677643 344444444444 233 34554433222222222222 1222233456788999863
Q ss_pred ---------CCeEEEEecCCCCcccc-------cCCCCCHHHHHHHHhh
Q psy7942 115 ---------DDTVAIFKKFDEGRVNY-------EGPASDEAALRKFLST 147 (216)
Q Consensus 115 ---------~p~i~~~~~~de~~~~y-------~G~~~~~~~l~~fi~~ 147 (216)
.|++.+.-+ ++.+.| .+.. +.++|.+.|+.
T Consensus 110 ~~~~~~~~~~p~tflID~--~G~I~~~~~~~~~~~~~-~~~eil~~l~~ 155 (157)
T 4g2e_A 110 PALPGYVLAKRAVFVIDK--EGKVRYKWVSDDPTKEP-PYDEIEKVVKS 155 (157)
T ss_dssp TTSTTCEEECEEEEEECT--TSBEEEEEEESSTTCCC-CHHHHHHHHHH
T ss_pred ccCCCcceeeeeEEEECC--CCEEEEEEECCCCCCCC-CHHHHHHHHHH
Confidence 244555543 234433 2333 67788887764
No 343
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=41.53 E-value=25 Score=25.89 Aligned_cols=40 Identities=8% Similarity=0.065 Sum_probs=29.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-e------EEEEcCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-E------EQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~------~f~~~d~~ 210 (216)
+.++.|....++.+...+..|.+++++|+++ + .++.++..
T Consensus 61 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 61 VVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred EEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 4455688778877888899999999999875 6 66665543
No 344
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=41.37 E-value=34 Score=23.74 Aligned_cols=38 Identities=8% Similarity=-0.063 Sum_probs=27.9
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhcc--CceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFR--EKEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r--~~~~f~~~d 208 (216)
+.++.|....++.+......|.+++++|+ +++.++.++
T Consensus 30 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~ 69 (144)
T 1o73_A 30 TVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLIS 69 (144)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEE
T ss_pred EEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEe
Confidence 44556877777778888999999999998 355554443
No 345
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=41.02 E-value=29 Score=26.30 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=32.5
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+.++.|.+..++++..+...+.++++++.+++.|...+.
T Consensus 26 v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 26 VEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred cEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 456679999999899999999999999999887766553
No 346
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=38.92 E-value=40 Score=23.74 Aligned_cols=40 Identities=5% Similarity=0.008 Sum_probs=29.4
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
++.++.|....++.+...+..|.+++++|+++ +.++.++.
T Consensus 25 k~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~ 65 (151)
T 3raz_A 25 PVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIAL 65 (151)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEES
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 34455688888877888899999999999654 66655543
No 347
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=37.83 E-value=1.4e+02 Score=22.99 Aligned_cols=98 Identities=17% Similarity=0.273 Sum_probs=54.8
Q ss_pred CCeEEEEEe-cCCCh----hHHHHHHHHHhhC--CCc--eEEecch---hhHHHHhhhhccccceeeecccHHHHHhcCC
Q psy7942 46 SKVVVAGLF-KDASS----ELAKTFNEIASKV--DDL--VFDASSE---LAKTFNEIASKVDDLVFVTSTNADILAEYSV 113 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~----~~~~~f~~~A~~~--~~~--~F~~~~~---~~~~~~~~~~~~~~~~~~~t~~~~v~~~~~v 113 (216)
.+.++|.|+ .+||. ...+.|.+++.++ ..+ .+++|-. ..++|-+-. .+...-++...+.++++.|++
T Consensus 33 gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~-~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 33 NKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDE-KSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHT-TCTTSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhc-CCCceEEEECCCcHHHHHhCc
Confidence 456777777 77874 4567788877766 345 4565543 344554421 122232324445678999987
Q ss_pred C------------CCeEEEEecCCCCccc--ccCCC--------CCHHHHHHHHhh
Q psy7942 114 D------------DDTVAIFKKFDEGRVN--YEGPA--------SDEAALRKFLST 147 (216)
Q Consensus 114 ~------------~p~i~~~~~~de~~~~--y~G~~--------~~~~~l~~fi~~ 147 (216)
. .|+..+++ ++ .+. +.|.. .+.+++.+.+..
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~--~G-~i~~~~~~~~~~~~~~~~~~~~~il~~l~~ 164 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVK--NG-VVEKMFIEPNEPGDPFKVSDADTMLKYLAP 164 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEE--TT-EEEEEEECCSCSSCCCSSSSHHHHHHHHCT
T ss_pred eeecccccCcccceeEEEEEE--CC-EEEEEEEeccCCCccceecCHHHHHHHhhh
Confidence 4 26666664 22 333 23321 266777777764
No 348
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=37.73 E-value=43 Score=24.93 Aligned_cols=38 Identities=8% Similarity=-0.007 Sum_probs=31.4
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEc
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDED 207 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~ 207 (216)
++.++.|.+..++.+..+...+.++++++.+++.|...
T Consensus 26 ~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~ 63 (192)
T 3h93_A 26 KIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRL 63 (192)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEE
T ss_pred CCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEE
Confidence 34577799999988889999999999999988877643
No 349
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=37.70 E-value=80 Score=23.01 Aligned_cols=78 Identities=14% Similarity=0.228 Sum_probs=40.5
Q ss_pred CCCeEEEEEecCC-C---hhHHHHHHHHHhhCCCceE-EecchhhHHHHhhhhccc--cceeeecccHHHHHhcCCCC--
Q psy7942 45 DSKVVVAGLFKDA-S---SELAKTFNEIASKVDDLVF-DASSELAKTFNEIASKVD--DLVFVTSTNADILAEYSVDD-- 115 (216)
Q Consensus 45 ~~~v~~V~f~~~~-~---~~~~~~f~~~A~~~~~~~F-~~~~~~~~~~~~~~~~~~--~~~~~~t~~~~v~~~~~v~~-- 115 (216)
..++++|.|+..| | ....+.+.++..+ +++.| ++|-.....-.+.+.+.+ ..-++...+..+++.|++..
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 3567888888777 4 5667788777766 55543 322221111111111111 11111223456888888752
Q ss_pred --------CeEEEEec
Q psy7942 116 --------DTVAIFKK 123 (216)
Q Consensus 116 --------p~i~~~~~ 123 (216)
|+.+++-+
T Consensus 122 ~~~~g~~~p~~~lid~ 137 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGA 137 (175)
T ss_dssp STTTTSBCSEEEEECT
T ss_pred cccCCcccceEEEECC
Confidence 67777664
No 350
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=37.53 E-value=40 Score=24.50 Aligned_cols=37 Identities=5% Similarity=-0.051 Sum_probs=27.9
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccC--ceEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFRE--KEEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~--~~~f~~~ 207 (216)
+.++.|....++.+...+..|.+++++|++ ++.++.+
T Consensus 50 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v 88 (165)
T 3s9f_A 50 TVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILA 88 (165)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEE
T ss_pred EEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 445568877887788899999999999986 4544444
No 351
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=37.00 E-value=45 Score=24.39 Aligned_cols=75 Identities=13% Similarity=0.224 Sum_probs=33.8
Q ss_pred HHHhHhCCCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCc-eEEecchhhHHHHhhhhccc-cceeeecccHHHHHh
Q psy7942 39 IKAFIADSKVVVAGLF-KDASS---ELAKTFNEIASKV--DDL-VFDASSELAKTFNEIASKVD-DLVFVTSTNADILAE 110 (216)
Q Consensus 39 ~~~~~~~~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~-~F~~~~~~~~~~~~~~~~~~-~~~~~~t~~~~v~~~ 110 (216)
+.++....+.+++.|| ..||. .....|.++..++ ..+ ..++|-.....-...+.+-. ++-.+...+.++++.
T Consensus 26 Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l~D~~~~v~~~ 105 (164)
T 4gqc_A 26 LYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLLSDYNREVIKL 105 (164)
T ss_dssp HHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHH
T ss_pred HHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCcccceeecCchHHHHH
Confidence 4455555666666666 56653 2233343444443 222 23444322222222222221 111123445678899
Q ss_pred cCC
Q psy7942 111 YSV 113 (216)
Q Consensus 111 ~~v 113 (216)
||+
T Consensus 106 ygv 108 (164)
T 4gqc_A 106 YNV 108 (164)
T ss_dssp TTC
T ss_pred cCC
Confidence 987
No 352
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=36.94 E-value=49 Score=23.58 Aligned_cols=38 Identities=13% Similarity=0.205 Sum_probs=29.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+.
T Consensus 34 ~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs 72 (170)
T 2p5q_A 34 VLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFP 72 (170)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEE
Confidence 4455677777777788899999999999876 7666554
No 353
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=36.82 E-value=48 Score=23.37 Aligned_cols=39 Identities=10% Similarity=0.003 Sum_probs=29.8
Q ss_pred cceEEEEEeCCccchhh-hhHHHHHHHHhccCc-eEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYES-HFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~-~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
++.++.|....++.+.. .+..|.+++++|+++ +.++.+.
T Consensus 31 k~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~ 71 (160)
T 3lor_A 31 KVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLH 71 (160)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEe
Confidence 34556688888877777 489999999999876 7776664
No 354
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=36.49 E-value=41 Score=23.84 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=26.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~ 207 (216)
+.++.|...+++.+......|.+++++|+++ +.++.+
T Consensus 40 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v 77 (164)
T 2h30_A 40 PTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITV 77 (164)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEE
Confidence 4566687777777888889999999988543 444433
No 355
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=35.94 E-value=47 Score=24.58 Aligned_cols=39 Identities=8% Similarity=-0.028 Sum_probs=31.8
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
..++.|.+..++.+..+...+.++.+++.+++.|.+...
T Consensus 27 v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 27 IEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred eEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 456778888888888888999999999988888876654
No 356
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=34.81 E-value=36 Score=26.19 Aligned_cols=39 Identities=13% Similarity=0.155 Sum_probs=29.8
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhc
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQ 148 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~ 148 (216)
+..++.++++.+ |++++ .+ +. .+.|.. +.+.|.++|...
T Consensus 170 ~~~l~~~~gV~gTPt~vi-~n--G~--~~~G~~-~~~~l~~~l~~~ 209 (211)
T 1t3b_A 170 HYELGIQFGVRGTPSIVT-ST--GE--LIGGYL-KPADLLRALEET 209 (211)
T ss_dssp HHHHHHHHTCCSSCEEEC-TT--SC--CCCSCC-CHHHHHHHHHHC
T ss_pred HHHHHHHcCCCcCCEEEE-eC--CE--EecCCC-CHHHHHHHHHhc
Confidence 456788999997 99988 43 22 467887 889999998764
No 357
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=34.51 E-value=51 Score=22.88 Aligned_cols=39 Identities=10% Similarity=0.027 Sum_probs=28.7
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
+.++.|....++.+...+..|.++.++|+++ +.++.+..
T Consensus 34 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (143)
T 4fo5_A 34 YTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISM 73 (143)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEEC
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEc
Confidence 4455577777777788889999999999864 66655543
No 358
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=34.41 E-value=35 Score=21.41 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=26.2
Q ss_pred EEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcCC
Q psy7942 173 LLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 173 lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d~ 209 (216)
+.+|...+.+........+.++++++..++.++.+|.
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~ 40 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGT 40 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTT
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecC
Confidence 5567777766677777777777777766677777764
No 359
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=34.40 E-value=1.5e+02 Score=22.56 Aligned_cols=101 Identities=13% Similarity=0.171 Sum_probs=54.8
Q ss_pred CCCeEEEEEec-CCCh---hHHHHHHHHHhhC--CCceE-Eecch---hhHHHHhhhhcc----c-cceeeecccHHHHH
Q psy7942 45 DSKVVVAGLFK-DASS---ELAKTFNEIASKV--DDLVF-DASSE---LAKTFNEIASKV----D-DLVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~~-~~~~---~~~~~f~~~A~~~--~~~~F-~~~~~---~~~~~~~~~~~~----~-~~~~~~t~~~~v~~ 109 (216)
..++++|.|+. .||. ...+.+.++..++ ..+.+ ++|-. ..+.|-+....- . ..-++...+..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 45788888885 8874 4455666666666 33433 33332 234444422111 1 12222334567889
Q ss_pred hcCCC-------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhh
Q psy7942 110 EYSVD-------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLST 147 (216)
Q Consensus 110 ~~~v~-------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~ 147 (216)
.|++. .|+.+++-+ ++.+.+ .|.. ...+.+.+.|+.
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~--~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDP--NGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECT--TSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECC--CCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 99985 388888864 223333 3332 146677776654
No 360
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=34.28 E-value=1.4e+02 Score=21.94 Aligned_cols=28 Identities=7% Similarity=-0.081 Sum_probs=21.8
Q ss_pred CCCeEEEEEecCCC---hhHHHHHHHHHhhC
Q psy7942 45 DSKVVVAGLFKDAS---SELAKTFNEIASKV 72 (216)
Q Consensus 45 ~~~v~~V~f~~~~~---~~~~~~f~~~A~~~ 72 (216)
..++++|.|+..|| ....+.+.++..++
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~ 75 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKY 75 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHh
Confidence 45789999999887 45577888888776
No 361
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=34.00 E-value=27 Score=25.62 Aligned_cols=40 Identities=8% Similarity=0.213 Sum_probs=30.1
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
+..++.++++.+ |++++ . ++. .+.|.. ..+.|.++|....
T Consensus 98 ~~~la~~~gI~gtPt~vi-~--nG~--~i~G~~-~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 98 TTSLGEQFGFNGTPTLVF-P--NGR--TQSGYS-PMPQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHTTCCSSCEEEC-T--TSC--EEESCC-CTTHHHHHHHHTS
T ss_pred HHHHHHHhCCCccCEEEE-E--CCE--EeeCCC-CHHHHHHHHHHHH
Confidence 556788999987 99998 4 222 467877 7788999887654
No 362
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=33.12 E-value=1.7e+02 Score=22.77 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=56.3
Q ss_pred CCCeEEEEEec-CCCh---hHHHHHHHHHhhC--CCce-EEecch---hhHHHHhhhhcc-----ccceeeecccHHHHH
Q psy7942 45 DSKVVVAGLFK-DASS---ELAKTFNEIASKV--DDLV-FDASSE---LAKTFNEIASKV-----DDLVFVTSTNADILA 109 (216)
Q Consensus 45 ~~~v~~V~f~~-~~~~---~~~~~f~~~A~~~--~~~~-F~~~~~---~~~~~~~~~~~~-----~~~~~~~t~~~~v~~ 109 (216)
..++++|.|+. .||. .....+.++..++ ..+. +++|-. ..++|-+....- -+.-.+...+.++++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35678888887 7774 4566777777766 2333 344443 234554422100 112222334567899
Q ss_pred hcCCC-------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhhc
Q psy7942 110 EYSVD-------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLSTQ 148 (216)
Q Consensus 110 ~~~v~-------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~~ 148 (216)
.|++. .|+.+++-+ ++.+.+ .|+. .+.+.+.+.|...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~--~G~I~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDE--KGVLRQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECT--TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcC--CCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99985 488888765 233333 2221 1567777777653
No 363
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=32.76 E-value=60 Score=23.54 Aligned_cols=38 Identities=11% Similarity=0.055 Sum_probs=29.4
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
+..++.|.+..++.+..+...+.++.+++.+ +.+++.+
T Consensus 23 ~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~ 60 (175)
T 3gyk_A 23 DVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYRE 60 (175)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEE
T ss_pred CEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEe
Confidence 3456779999998888999999999998875 5555544
No 364
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=38.59 E-value=9.5 Score=26.46 Aligned_cols=39 Identities=10% Similarity=-0.022 Sum_probs=28.5
Q ss_pred ceEEEEEeCCccchhhhhHHH---HHHHHhccCceEEEEcCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPV---QTVAKDFREKEEQDEDDD 209 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l---~~vA~~~r~~~~f~~~d~ 209 (216)
+.++.|....++.+..+...+ .++++.+.+++.++.+|.
T Consensus 21 ~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~ 62 (130)
T 2lst_A 21 MVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSV 62 (130)
Confidence 345557777777777777777 888888887788877775
No 365
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=31.88 E-value=66 Score=22.80 Aligned_cols=38 Identities=13% Similarity=0.094 Sum_probs=28.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+.
T Consensus 33 ~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 71 (169)
T 2v1m_A 33 VCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFP 71 (169)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEE
Confidence 4455677777777788889999999999875 6555543
No 366
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=31.75 E-value=46 Score=23.35 Aligned_cols=37 Identities=16% Similarity=0.179 Sum_probs=27.1
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
++.++.|....++.+......|.+++++| ++.++.++
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~ 67 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVIS 67 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEE
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEe
Confidence 34566688877777788899999999999 55444443
No 367
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=31.67 E-value=65 Score=23.65 Aligned_cols=38 Identities=16% Similarity=0.238 Sum_probs=28.7
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+.
T Consensus 51 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs 89 (181)
T 2p31_A 51 VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFP 89 (181)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 4455677777777788889999999999876 6665553
No 368
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=31.62 E-value=1.7e+02 Score=23.21 Aligned_cols=100 Identities=10% Similarity=0.096 Sum_probs=54.5
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhC--CCce-EEecchh---hHHHHhhhhcc-----ccceeeecccHHHHHh
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKV--DDLV-FDASSEL---AKTFNEIASKV-----DDLVFVTSTNADILAE 110 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~--~~~~-F~~~~~~---~~~~~~~~~~~-----~~~~~~~t~~~~v~~~ 110 (216)
.++++|.|+ .+|| ......|.++..++ ..+. +++|-.. .++|-+....- -.+-.+...+.++++.
T Consensus 91 GK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~~ 170 (254)
T 3tjj_A 91 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 170 (254)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHHH
Confidence 467777777 6664 56677787777776 2333 3444433 34554422110 0122223345678999
Q ss_pred cCCC-------CCeEEEEecCCCCcccc--cCCC---CCHHHHHHHHhh
Q psy7942 111 YSVD-------DDTVAIFKKFDEGRVNY--EGPA---SDEAALRKFLST 147 (216)
Q Consensus 111 ~~v~-------~p~i~~~~~~de~~~~y--~G~~---~~~~~l~~fi~~ 147 (216)
|++. .|+++++-+ ++.+.+ .++. .+.+.|.+.|..
T Consensus 171 ygv~~~~~g~~~p~tflID~--~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 171 YGVYLEDSGHTLRGLFIIDD--KGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp HTCEETTTTEECEEEEEECT--TSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred cCCccccCCCccceEEEECC--CCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 9983 478877765 233332 2211 156777777654
No 369
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=31.53 E-value=47 Score=23.83 Aligned_cols=40 Identities=8% Similarity=-0.037 Sum_probs=25.8
Q ss_pred ceEEEEEeCCcc-chhhhhHHHHHHHHhccCc---eEEEEcCCC
Q psy7942 171 SHLLVFFSKAAG-HYESHFEPVQTVAKDFREK---EEQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~-~~~~~~~~l~~vA~~~r~~---~~f~~~d~~ 210 (216)
+.++.|....+. .+...+..|.++.++|+++ +.++-+...
T Consensus 35 ~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 35 VWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp CEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 445667777765 5666778888888877643 655555433
No 370
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=30.82 E-value=75 Score=22.91 Aligned_cols=36 Identities=11% Similarity=0.186 Sum_probs=27.9
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~ 207 (216)
+.++.|....++.+. .+..|.+++++|+++ +.++-+
T Consensus 34 ~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~v 70 (171)
T 3cmi_A 34 VVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGF 70 (171)
T ss_dssp EEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEE
Confidence 456668888877777 889999999999876 666555
No 371
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=30.66 E-value=67 Score=22.51 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=28.7
Q ss_pred ceEEEEEeCCccchhhh-hHHHHHHHHhccC-ceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESH-FEPVQTVAKDFRE-KEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~-~~~l~~vA~~~r~-~~~f~~~d 208 (216)
+.++.|....++.+... +..|.+++++|++ .+.++-++
T Consensus 30 ~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~ 69 (158)
T 3eyt_A 30 VIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLH 69 (158)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred EEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEE
Confidence 44555888887777775 8999999999985 47666554
No 372
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=30.49 E-value=44 Score=26.30 Aligned_cols=44 Identities=11% Similarity=0.229 Sum_probs=0.0
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhhcC
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLSTQS 149 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~~~ 149 (216)
+..++.++++.+ |++++... ++......|.. +.+.|.++|....
T Consensus 188 ~~~l~~~~gv~gtPt~vi~~~-~G~~~~~~G~~-~~~~L~~~l~~~~ 232 (241)
T 1v58_A 188 NEKLMDDLGANVTPAIYYMSK-ENTLQQAVGLP-DQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHHHTCCSSCEEEEEET-TTEEEEEESSC-CHHHHHHHTTC--
T ss_pred HHHHHHHcCCCCCCEEEEECC-CCCEEEecCCC-CHHHHHHHHHHHH
No 373
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=30.10 E-value=62 Score=23.96 Aligned_cols=39 Identities=15% Similarity=0.146 Sum_probs=31.0
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
+..++.|.+..++.+..+...|.++.+++.+++.|....
T Consensus 23 ~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p 61 (195)
T 2znm_A 23 KIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH 61 (195)
T ss_dssp SEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEE
T ss_pred CcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEec
Confidence 345677889888888888889999999998887776554
No 374
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=30.09 E-value=52 Score=24.25 Aligned_cols=39 Identities=10% Similarity=0.141 Sum_probs=29.1
Q ss_pred eEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCCC
Q psy7942 172 HLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDDQ 210 (216)
Q Consensus 172 ~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~~ 210 (216)
.++.|....++.+...+..|.+++++|+++ +.++.++..
T Consensus 49 vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 49 TVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 455577777776778888899999999875 777666654
No 375
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=29.36 E-value=71 Score=23.64 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=28.2
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~ 207 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+
T Consensus 50 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~v 87 (190)
T 2vup_A 50 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAF 87 (190)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4566687777777778899999999999875 655544
No 376
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=29.28 E-value=1.5e+02 Score=20.84 Aligned_cols=102 Identities=11% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCeEEEEEec-CCCh---hHHHHHHHHHhhC--CCce-EEecchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCC---
Q psy7942 46 SKVVVAGLFK-DASS---ELAKTFNEIASKV--DDLV-FDASSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVD--- 114 (216)
Q Consensus 46 ~~v~~V~f~~-~~~~---~~~~~f~~~A~~~--~~~~-F~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~--- 114 (216)
.++++|.|+. .||. ...+.+.++..++ ..+. .++|-.......+.+.+.+- .-.+...+.++++.|++.
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4577787886 7874 3445566666555 2333 34433333334443333322 222233456788889874
Q ss_pred ----------CCeEEEEecCCCCcccccCCC--CCHHHHHHHHhh
Q psy7942 115 ----------DDTVAIFKKFDEGRVNYEGPA--SDEAALRKFLST 147 (216)
Q Consensus 115 ----------~p~i~~~~~~de~~~~y~G~~--~~~~~l~~fi~~ 147 (216)
.|+.+++.+...-...|.|.. ...+.|.+.|+.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHHH
Confidence 488888765222122333321 134566666653
No 377
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=29.00 E-value=78 Score=23.01 Aligned_cols=38 Identities=5% Similarity=0.032 Sum_probs=27.5
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccC-ceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFRE-KEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~-~~~f~~~d 208 (216)
..++.|....+..+...+..|++++++|++ .+.++.++
T Consensus 62 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~ 100 (186)
T 1jfu_A 62 TLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAIN 100 (186)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEE
T ss_pred EEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEE
Confidence 446667777777778888899999999973 46555444
No 378
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=27.99 E-value=45 Score=23.32 Aligned_cols=36 Identities=8% Similarity=0.023 Sum_probs=26.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
+.++.|...+++.+......|++++++ +++.++.++
T Consensus 44 ~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~ 79 (156)
T 1kng_A 44 VSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGIN 79 (156)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEE
T ss_pred EEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEE
Confidence 456668887777777788888888776 557666655
No 379
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=27.76 E-value=54 Score=24.70 Aligned_cols=41 Identities=7% Similarity=0.015 Sum_probs=31.2
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHHhc-cCceEEEEcCCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAKDF-REKEEQDEDDDQ 210 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~~~-r~~~~f~~~d~~ 210 (216)
+..++.|.+-.++.+.++...+.++.+++ .+++.+++-++-
T Consensus 15 ~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p 56 (182)
T 3gn3_A 15 PRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQS 56 (182)
T ss_dssp SEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECC
T ss_pred CEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcC
Confidence 45677788988888877777777766665 888988887763
No 380
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=27.70 E-value=1.9e+02 Score=21.53 Aligned_cols=75 Identities=8% Similarity=0.089 Sum_probs=40.4
Q ss_pred HHHhHhCCCeEEEEEecCCCh---h-HHHHHHHHHhhC--CCc--eEEecch---hhHHHHhhhhccc-cceeeecccHH
Q psy7942 39 IKAFIADSKVVVAGLFKDASS---E-LAKTFNEIASKV--DDL--VFDASSE---LAKTFNEIASKVD-DLVFVTSTNAD 106 (216)
Q Consensus 39 ~~~~~~~~~v~~V~f~~~~~~---~-~~~~f~~~A~~~--~~~--~F~~~~~---~~~~~~~~~~~~~-~~~~~~t~~~~ 106 (216)
+.++.+...++++.|-.+||. . +.+.|.+++.++ ..+ ..++|-. ..++|-+-. ++. ..-++...+.+
T Consensus 50 L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~-~~~~~fp~l~D~~~~ 128 (184)
T 3uma_A 50 TELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHS-GGMGKIHFLSDWNAA 128 (184)
T ss_dssp HHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHH-TCTTTSEEEECTTCH
T ss_pred HHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHh-CCCCceEEEEcCchH
Confidence 444344444555555577874 4 456787777766 223 3455443 345554422 222 13333445567
Q ss_pred HHHhcCCC
Q psy7942 107 ILAEYSVD 114 (216)
Q Consensus 107 v~~~~~v~ 114 (216)
+++.|++.
T Consensus 129 va~~yGv~ 136 (184)
T 3uma_A 129 FTKAIGME 136 (184)
T ss_dssp HHHHTTCE
T ss_pred HHHHcCCc
Confidence 89999984
No 381
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=27.44 E-value=32 Score=25.96 Aligned_cols=40 Identities=10% Similarity=0.054 Sum_probs=30.7
Q ss_pred ceEEEEEeCCccchhhhhHHH---HHHHHhccCceEEEEcCCC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPV---QTVAKDFREKEEQDEDDDQ 210 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l---~~vA~~~r~~~~f~~~d~~ 210 (216)
+.++.|.+..++.+..+...+ .++++++.+++.|++.++.
T Consensus 16 ~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 16 PAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp CSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 457778888888877777765 6888889888888777663
No 382
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=27.11 E-value=87 Score=22.88 Aligned_cols=38 Identities=8% Similarity=0.065 Sum_probs=27.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+.
T Consensus 49 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs 87 (183)
T 2obi_A 49 VCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFP 87 (183)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred EEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 4455577777777778888999999999875 6555543
No 383
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=26.42 E-value=1.9e+02 Score=21.05 Aligned_cols=99 Identities=13% Similarity=0.203 Sum_probs=50.0
Q ss_pred CCeEEEEEe-cCCCh---hHHHHHHHHHhhC--CCce-EEecchhhHHHHhhhhcccc-ceeeecccHHHHHhcCCC---
Q psy7942 46 SKVVVAGLF-KDASS---ELAKTFNEIASKV--DDLV-FDASSELAKTFNEIASKVDD-LVFVTSTNADILAEYSVD--- 114 (216)
Q Consensus 46 ~~v~~V~f~-~~~~~---~~~~~f~~~A~~~--~~~~-F~~~~~~~~~~~~~~~~~~~-~~~~~t~~~~v~~~~~v~--- 114 (216)
.++++|.|+ ..||. .....+.++..++ ..+. .+++-.......+.+.+.+- .-.+...+.++++.|++.
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 456666666 77774 4455666666665 2332 34444333333333333321 222233456788889874
Q ss_pred ----------CCeEEEEecCCCCccc--ccCCC--CCHHHHHHHHh
Q psy7942 115 ----------DDTVAIFKKFDEGRVN--YEGPA--SDEAALRKFLS 146 (216)
Q Consensus 115 ----------~p~i~~~~~~de~~~~--y~G~~--~~~~~l~~fi~ 146 (216)
.|+.+++-+ + +.+. |.|.. ...+.|.+.|+
T Consensus 131 ~~~g~~~~~~~p~~~lID~-~-G~I~~~~~~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGP-T-HRIVEAWRQVKVPGHAEEVLNKLK 174 (179)
T ss_dssp CCC--CEEEECCEEEEECT-T-SBEEEEECSCCSTTHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECC-C-CEEEEEEcCCCCCCCHHHHHHHHH
Confidence 266777764 2 2332 33311 14556666654
No 384
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=25.63 E-value=1.7e+02 Score=23.18 Aligned_cols=108 Identities=9% Similarity=0.036 Sum_probs=53.3
Q ss_pred HHhHhCCC-eEEEEEecCCCh---hHHHHHHHHHhhC--CCce-EEecc---hhhHHHHhh-hhccc-c--ceeeecccH
Q psy7942 40 KAFIADSK-VVVAGLFKDASS---ELAKTFNEIASKV--DDLV-FDASS---ELAKTFNEI-ASKVD-D--LVFVTSTNA 105 (216)
Q Consensus 40 ~~~~~~~~-v~~V~f~~~~~~---~~~~~f~~~A~~~--~~~~-F~~~~---~~~~~~~~~-~~~~~-~--~~~~~t~~~ 105 (216)
.++++..+ ++++.|..++|. .....|.+++.++ .++. .++|- ...++|.+. .+... . +-.+...+.
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~ 106 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQG 106 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTS
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCch
Confidence 44542334 555666677874 3455555555555 2343 23322 234555542 21111 1 111133456
Q ss_pred HHHHhcCCC--------CCeEEEEecCCCCcccccCCC---CCHHHHHHHHhh
Q psy7942 106 DILAEYSVD--------DDTVAIFKKFDEGRVNYEGPA---SDEAALRKFLST 147 (216)
Q Consensus 106 ~v~~~~~v~--------~p~i~~~~~~de~~~~y~G~~---~~~~~l~~fi~~ 147 (216)
++++.|++. .|++.++-+...-...+.|+. .+.++|.+.|..
T Consensus 107 ~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~a 159 (249)
T 3a2v_A 107 TVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKA 159 (249)
T ss_dssp HHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHH
Confidence 789999974 478888765222122222332 167777777654
No 385
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=25.45 E-value=1.9e+02 Score=21.00 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=21.0
Q ss_pred HHHhHhCCCeEEEEEecCCCh---hH-HHHHHHHHhhC
Q psy7942 39 IKAFIADSKVVVAGLFKDASS---EL-AKTFNEIASKV 72 (216)
Q Consensus 39 ~~~~~~~~~v~~V~f~~~~~~---~~-~~~f~~~A~~~ 72 (216)
+.++.+..+++++.|...||. .+ .+.|.++..++
T Consensus 37 l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~ 74 (171)
T 2pwj_A 37 VNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKF 74 (171)
T ss_dssp HHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHH
T ss_pred HHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHH
Confidence 344444556777777777874 44 55677666655
No 386
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=25.10 E-value=2e+02 Score=20.87 Aligned_cols=74 Identities=8% Similarity=0.093 Sum_probs=38.1
Q ss_pred HHHhHhCCCeEEEEEe-cCCCh---h-HHHHHHHHHhhC--CCc--eEEecchh---hHHHHhhhhccc-cceeeecccH
Q psy7942 39 IKAFIADSKVVVAGLF-KDASS---E-LAKTFNEIASKV--DDL--VFDASSEL---AKTFNEIASKVD-DLVFVTSTNA 105 (216)
Q Consensus 39 ~~~~~~~~~v~~V~f~-~~~~~---~-~~~~f~~~A~~~--~~~--~F~~~~~~---~~~~~~~~~~~~-~~~~~~t~~~ 105 (216)
+.++++. +.++|.|+ ..||. . ..+.|.++..++ ..+ .+++|-.. .+.|-+-. ++. .+-++...+.
T Consensus 25 L~d~~~G-k~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~-~~~~~fp~l~D~~~ 102 (167)
T 2wfc_A 25 MAELFAG-KKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAH-GADDKVQMLADPGG 102 (167)
T ss_dssp HHHHTTT-SEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHT-TCTTTSEEEECTTS
T ss_pred HHHHhCC-CcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhc-CCCcceEEEECCCC
Confidence 3444333 45666666 77874 4 556777776665 344 35554432 34444321 122 1222233456
Q ss_pred HHHHhcCCC
Q psy7942 106 DILAEYSVD 114 (216)
Q Consensus 106 ~v~~~~~v~ 114 (216)
++++.|++.
T Consensus 103 ~~~~~~gv~ 111 (167)
T 2wfc_A 103 AFTKAVDME 111 (167)
T ss_dssp HHHHHTTCE
T ss_pred cHHHHcCCc
Confidence 788888874
No 387
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=25.07 E-value=1.9e+02 Score=20.59 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=43.2
Q ss_pred CCeEEEEEe-cCCC---hhHHHHHHHHHhhCCCce-EEecchhhHHHHhhhhccc--cceeeecc-cHHHHHhcCCC---
Q psy7942 46 SKVVVAGLF-KDAS---SELAKTFNEIASKVDDLV-FDASSELAKTFNEIASKVD--DLVFVTST-NADILAEYSVD--- 114 (216)
Q Consensus 46 ~~v~~V~f~-~~~~---~~~~~~f~~~A~~~~~~~-F~~~~~~~~~~~~~~~~~~--~~~~~~t~-~~~v~~~~~v~--- 114 (216)
.++++|.|+ ..|| ....+.+.++..++.++. .++|-.......+.+.+.+ ..-.+... +..+++.|++.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~ 122 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKLSNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQT 122 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHSTTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEECS
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCceecc
Confidence 467788777 5665 566778888877764443 3433322222223332222 12222222 46788888874
Q ss_pred -------CCeEEEEec
Q psy7942 115 -------DDTVAIFKK 123 (216)
Q Consensus 115 -------~p~i~~~~~ 123 (216)
.|+.+++-+
T Consensus 123 ~~~~g~~~p~~~liD~ 138 (165)
T 1q98_A 123 GPLAGLTSRAVIVLDE 138 (165)
T ss_dssp STTTTSBCCEEEEECT
T ss_pred cccCCccceeEEEEcC
Confidence 278887764
No 388
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=24.86 E-value=1.1e+02 Score=22.14 Aligned_cols=37 Identities=11% Similarity=0.074 Sum_probs=28.1
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~ 207 (216)
..++.|....++.+...+..|.+++++|+++ +.++-+
T Consensus 40 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~i 77 (180)
T 3kij_A 40 VSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAF 77 (180)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEE
Confidence 4455577777777888899999999999886 555444
No 389
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=24.77 E-value=78 Score=23.37 Aligned_cols=38 Identities=11% Similarity=0.182 Sum_probs=28.5
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eE--EEEcC
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EE--QDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~--f~~~d 208 (216)
+.++.|....++.+...+..|.+++++|+++ +. .+.+|
T Consensus 48 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 88 (187)
T 3dwv_A 48 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSN 88 (187)
T ss_dssp CEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBC
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECc
Confidence 4566687777777888899999999999875 54 44555
No 390
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=24.58 E-value=21 Score=26.31 Aligned_cols=36 Identities=3% Similarity=-0.080 Sum_probs=24.0
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCceEEEE
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREKEEQDE 206 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~~~f~~ 206 (216)
+.++.|...+++.+......|.++++.+..++.|+.
T Consensus 48 ~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~ 83 (164)
T 1sen_A 48 PLMVIIHKSWCGACKALKPKFAESTEISELSHNFVM 83 (164)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEE
T ss_pred eEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 456668888887777778888887766554443333
No 391
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=24.08 E-value=77 Score=24.21 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=29.1
Q ss_pred eEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEcCC
Q psy7942 172 HLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDEDDD 209 (216)
Q Consensus 172 ~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~d~ 209 (216)
.++.|....++.+...+..|.+++++|+++ +.++-+..
T Consensus 62 vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~ 100 (218)
T 3u5r_E 62 LLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINS 100 (218)
T ss_dssp EEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 455577777777788899999999999876 76666554
No 392
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=23.68 E-value=1.1e+02 Score=22.84 Aligned_cols=42 Identities=17% Similarity=0.212 Sum_probs=29.1
Q ss_pred cHHHHHhcCCCC-CeEEEEecCCCCcccccCCCCCHHHHHHHHhh
Q psy7942 104 NADILAEYSVDD-DTVAIFKKFDEGRVNYEGPASDEAALRKFLST 147 (216)
Q Consensus 104 ~~~v~~~~~v~~-p~i~~~~~~de~~~~y~G~~~~~~~l~~fi~~ 147 (216)
+...+.++++.+ |+++++.+. +....+.|.. ..+.+.++|..
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G-~~~~~~~G~~-~~~~l~~~l~~ 207 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGT-DRYLITTGYR-PIEALRQLLDT 207 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETT-EEEEEESSCC-CHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECC-EEEEeccCCC-CHHHHHHHHHH
Confidence 345577889987 999988741 1112467877 78888888765
No 393
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=23.52 E-value=1.2e+02 Score=22.23 Aligned_cols=37 Identities=8% Similarity=0.073 Sum_probs=26.6
Q ss_pred ceEEEEEeCCccchhhhhHHHHHHHHhccCc-eEEEEc
Q psy7942 171 SHLLVFFSKAAGHYESHFEPVQTVAKDFREK-EEQDED 207 (216)
Q Consensus 171 ~~lllf~~~~~~~~~~~~~~l~~vA~~~r~~-~~f~~~ 207 (216)
+.++.|....++.+...+..|.+++++|+++ +.++-+
T Consensus 51 ~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~i 88 (185)
T 2gs3_A 51 VCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAF 88 (185)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 4455577777777777888889999988875 655544
No 394
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=22.29 E-value=1.1e+02 Score=22.79 Aligned_cols=41 Identities=5% Similarity=-0.066 Sum_probs=25.7
Q ss_pred ceEEEEEeCCccc-hhhhhHHHHHHHHhcc----CceEEEEcCCCC
Q psy7942 171 SHLLVFFSKAAGH-YESHFEPVQTVAKDFR----EKEEQDEDDDQP 211 (216)
Q Consensus 171 ~~lllf~~~~~~~-~~~~~~~l~~vA~~~r----~~~~f~~~d~~~ 211 (216)
+.++.|....++. +...+..|.++.+++. +++.++.+...|
T Consensus 43 ~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 43 FSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp CEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred EEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 4455677777776 6777777777666664 356555544433
No 395
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=22.27 E-value=83 Score=22.46 Aligned_cols=37 Identities=5% Similarity=0.051 Sum_probs=26.5
Q ss_pred ceEEEEEeCC-ccchhhhhHHHHHHHHhccCceEEEEcC
Q psy7942 171 SHLLVFFSKA-AGHYESHFEPVQTVAKDFREKEEQDEDD 208 (216)
Q Consensus 171 ~~lllf~~~~-~~~~~~~~~~l~~vA~~~r~~~~f~~~d 208 (216)
+.++.|.... ++.+...+..|++++++| +++.++.+.
T Consensus 46 ~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is 83 (167)
T 2jsy_A 46 VTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTIS 83 (167)
T ss_dssp CEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEE
T ss_pred eEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEE
Confidence 4456677766 677788889999999999 665554443
No 396
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=20.67 E-value=1.3e+02 Score=22.96 Aligned_cols=40 Identities=18% Similarity=0.081 Sum_probs=30.0
Q ss_pred cceEEEEEeCCccchhhhhHHHHHHHH-hc--cCceEEEEcCC
Q psy7942 170 KSHLLVFFSKAAGHYESHFEPVQTVAK-DF--REKEEQDEDDD 209 (216)
Q Consensus 170 ~~~lllf~~~~~~~~~~~~~~l~~vA~-~~--r~~~~f~~~d~ 209 (216)
+..++.|.|-.++.+.++...+...-+ +| .+++.+++-++
T Consensus 16 ~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 16 KLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp SEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 455777889888877777766655555 78 78899998877
No 397
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=20.30 E-value=2.4e+02 Score=20.01 Aligned_cols=69 Identities=13% Similarity=0.148 Sum_probs=35.4
Q ss_pred CCCeEEEEEe-cCCCh----hHHHHHHHHHhhC--CCc--eEEecch---hhHHHHhhhhccc-cceeeecccHHHHHhc
Q psy7942 45 DSKVVVAGLF-KDASS----ELAKTFNEIASKV--DDL--VFDASSE---LAKTFNEIASKVD-DLVFVTSTNADILAEY 111 (216)
Q Consensus 45 ~~~v~~V~f~-~~~~~----~~~~~f~~~A~~~--~~~--~F~~~~~---~~~~~~~~~~~~~-~~~~~~t~~~~v~~~~ 111 (216)
..+.++|.|+ ..||. .....|.++..++ ..+ .+++|-. ..++|-+-. +++ ..-++...+.++++.|
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~-~~~~~~~~l~D~~~~~~~~~ 112 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSY-PENKHVKFLADGSATYTHAL 112 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTC-TTCSSEEEEECTTSHHHHHT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhc-CCCCCeEEEECCCchHHHHc
Confidence 3456777777 67773 4566777777665 233 3444432 233443311 121 1222233445677778
Q ss_pred CCC
Q psy7942 112 SVD 114 (216)
Q Consensus 112 ~v~ 114 (216)
++.
T Consensus 113 gv~ 115 (162)
T 1tp9_A 113 GLE 115 (162)
T ss_dssp TCE
T ss_pred Ccc
Confidence 764
Done!