RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7943
(142 letters)
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 122
Score = 95.9 bits (238), Expect = 3e-27
Identities = 18/123 (14%), Positives = 45/123 (36%), Gaps = 15/123 (12%)
Query: 26 GVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDA 85
G + L + +F+ ++E+ + +V+F K ++ + D+ +A V
Sbjct: 3 GCVDLDELSFEKTVERFPYSVVKFDIASPYGEKH--EAFTAFSKSAHKATKDLLIATVGV 60
Query: 86 TQ-----HTALAEQYG--VRGYPTLKFFKKRSIIEYGEVTSVEYCYQRNWHKRAVTSVII 138
+ AL ++Y + +P++ FK V+ + + + +
Sbjct: 61 KDYGELENKALGDRYKVDDKNFPSIFLFKG------NADEYVQLPSHVDVTLDNLKAFVS 114
Query: 139 RKT 141
T
Sbjct: 115 ANT 117
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29,
N-terminal domain {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 122
Score = 81.6 bits (201), Expect = 1e-21
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Query: 25 DGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGH----DIKL 80
G L L F I K +LV+F + KQ E+ + A A+ ++ +
Sbjct: 4 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQ--DEFKRLAENSASSDDLLVAEVGI 61
Query: 81 AKVDATQHTALAEQY--GVRGYPTLKFFKKRSIIEYGE 116
+ + L+E+Y YP F+
Sbjct: 62 SDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVP 99
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus
cuniculus) [TaxId: 9986]}
Length = 124
Score = 79.1 bits (194), Expect = 2e-20
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 21 VTEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGH------CKQLVPEYSKAALQLATD 74
D V+ + N+++ +K++ + + ++ P + AA L +
Sbjct: 7 YDGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVL--E 64
Query: 75 GHDIKLAKVDATQHTALAEQYGVRGYPTLKFFKKRSIIEY 114
+ VD+ + A+A++ G+ ++ FK+ +IEY
Sbjct: 65 DKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEVIEY 104
>d1meka_ c.47.1.2 (A:) Protein disulfide isomerase, PDI {Human (Homo
sapiens) [TaxId: 9606]}
Length = 120
Score = 78.0 bits (191), Expect = 3e-20
Identities = 55/90 (61%), Positives = 70/90 (77%)
Query: 19 DDVTEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDI 78
D EED VLVL + NF ++ H ++LVEFYAPWCGHCK L PEY+KAA +L +G +I
Sbjct: 1 DAPEEEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEI 60
Query: 79 KLAKVDATQHTALAEQYGVRGYPTLKFFKK 108
+LAKVDAT+ + LA+QYGVRGYPT+KFF+
Sbjct: 61 RLAKVDATEESDLAQQYGVRGYPTIKFFRN 90
>d2trxa_ c.47.1.1 (A:) Thioredoxin {Escherichia coli [TaxId: 562]}
Length = 108
Score = 63.7 bits (154), Expect = 8e-15
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 25 DGVLVLTQDNFQSSIEKHDH-ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKV 83
D ++ LT D+F + + K D ILV+F+A WCG CK + P + A + + +AK+
Sbjct: 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADE---YQGKLTVAKL 58
Query: 84 DATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ Q+ A +YG+RG PTL FK +
Sbjct: 59 NIDQNPGTAPKYGIRGIPTLLLFKNGEVAA 88
>d1nw2a_ c.47.1.1 (A:) Thioredoxin {Alicyclobacillus acidocaldarius,
formerly Bacillus acidocaldarius [TaxId: 405212]}
Length = 105
Score = 63.7 bits (154), Expect = 9e-15
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 26 GVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDA 85
+ LT NFQ +I+ +LV+F+A WCG C+ + P + A A + +AK++
Sbjct: 1 ATMTLTDANFQQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHA---DKVTVAKLNV 57
Query: 86 TQHTALAEQYGVRGYPTLKFFKKRSIIE 113
++ Q+G+ PTL FK ++
Sbjct: 58 DENPETTSQFGIMSIPTLILFKGGEPVK 85
>d2es7a1 c.47.1.20 (A:7-125) Hydrogenase-1 operon protein HyaE
{Salmonella typhimurium [TaxId: 90371]}
Length = 119
Score = 63.5 bits (154), Expect = 1e-14
Identities = 13/92 (14%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 24 EDGVLVLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLA 81
G + I++ IL+ ++ + D ++A
Sbjct: 10 TRGWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF--PQFDWQVA 67
Query: 82 KVDATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
D Q A+ +++ VR +P F +
Sbjct: 68 VADLEQSEAIGDRFNVRRFPATLVFTDGKLRG 99
>d2hfda1 c.47.1.20 (A:1-132) Hydrogenase-1 operon protein HyaE
{Escherichia coli [TaxId: 562]}
Length = 132
Score = 62.4 bits (151), Expect = 5e-14
Identities = 10/92 (10%), Positives = 28/92 (30%), Gaps = 4/92 (4%)
Query: 24 EDGVLVLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLA 81
G +++ + + +L+ + + + ++A
Sbjct: 16 ARGWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLREFP--DYTWQVA 73
Query: 82 KVDATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
D Q A+ +++GV +P F +
Sbjct: 74 IADLEQSEAIGDRFGVFRFPATLVFTGGNYRG 105
>d2djja1 c.47.1.2 (A:6-121) Protein disulfide isomerase, PDI {Fungi
(Humicola insolens) [TaxId: 34413]}
Length = 116
Score = 60.2 bits (145), Expect = 2e-13
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 25 DG-VLVLTQDNFQSSI-EKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAK 82
+G V V+ N+ + + +L+EFYAPWCGHCK L P+Y + A
Sbjct: 1 EGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYA-KSEFKDRVV 59
Query: 83 VDATQHTALAEQYGVRGYPTLKFFKK 108
+ TA ++G+PT+K +
Sbjct: 60 IAKVDATANDVPDEIQGFPTIKLYPA 85
>d1nhoa_ c.47.1.1 (A:) MTH807, thioredoxin/glutaredoxin-like protein
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 85
Score = 57.4 bits (138), Expect = 1e-12
Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 4/65 (6%)
Query: 45 ILVE-FYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRGYPTL 103
+ +E F +P C +C + + G I + K+D A +YG+ P +
Sbjct: 3 VNIEVFTSPTCPYCPMAIEVVDE---AKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAI 59
Query: 104 KFFKK 108
Sbjct: 60 AINGV 64
>d2b5ea4 c.47.1.2 (A:23-141) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 119
Score = 56.8 bits (136), Expect = 5e-12
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 22 TEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLA 81
E+ V+ L D+F I+ HD +L EF+APWCGHCK + PEY KAA L +
Sbjct: 7 PEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLA-- 64
Query: 82 KVDATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
++D T++ L ++ + G+P+LK FK +
Sbjct: 65 QIDCTENQDLCMEHNIPGFPSLKIFKNSDVNN 96
>d2b5ea1 c.47.1.2 (A:365-504) Protein disulfide isomerase, PDI
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 140
Score = 57.2 bits (137), Expect = 6e-12
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 22 TEEDGVLVLTQDNFQSSIEKHD-HILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKL 80
++ V L N + +LV +YAPWCGHCK+L P Y + A A D+ +
Sbjct: 9 NQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLI 68
Query: 81 AKVDATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
AK+D T++ + GYPT+ + E
Sbjct: 69 AKLDHTEND--VRGVVIEGYPTIVLYPGGKKSE 99
>d1thxa_ c.47.1.1 (A:) Thioredoxin {Anabaena sp., pcc 7120 [TaxId:
1167]}
Length = 108
Score = 55.6 bits (133), Expect = 1e-11
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 25 DGVLVLTQDNFQSSIEKHDH-ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKV 83
GV+ +T F+S + K + +LV F+A WCG C+ + P + AA T +K+ K+
Sbjct: 2 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAA---NTYSDRLKVVKL 58
Query: 84 DATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ + ++Y V G P L+ K I++
Sbjct: 59 EIDPNPTTVKKYKVEGVPALRLVKGEQILD 88
>d1dbya_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 107
Score = 54.9 bits (131), Expect = 2e-11
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 27 VLVLTQDNFQSSIEKHD-HILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDA 85
+ D F++ + + +LV+F+APWCG C+ + P + A + +K K++
Sbjct: 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGE---YKDKLKCVKLNT 59
Query: 86 TQHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ +A +YG+R PT+ FK E
Sbjct: 60 DESPNVASEYGIRSIPTIMVFKGGKKCE 87
>d1f9ma_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin F [TaxId: 3562]}
Length = 112
Score = 55.2 bits (132), Expect = 2e-11
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Query: 27 VLVLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVD 84
V + +D F ++ ++++ + WCG CK + P+Y K I L
Sbjct: 8 VTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEK---LAEEYLDVIFLKLDC 64
Query: 85 ATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
++ LA++ G+R PT K K+ S++
Sbjct: 65 NQENKTLAKELGIRVVPTFKILKENSVVG 93
>d1gh2a_ c.47.1.1 (A:) Thioredoxin-like protein, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 54.8 bits (131), Expect = 2e-11
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
Query: 29 VLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDAT 86
V + +FQ + +V+F CG C ++ P +S ++ +VD
Sbjct: 6 VGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFS----SMSNKYPQAVFLEVDVH 61
Query: 87 QHTALAEQYGVRGYPTLKFFKKRSIIE 113
Q A + PT +FF+ + I+
Sbjct: 62 QCQGTAATNNISATPTFQFFRNKVRID 88
>d1r26a_ c.47.1.1 (A:) Thioredoxin {Trypanosoma brucei [TaxId:
5691]}
Length = 113
Score = 51.0 bits (121), Expect = 6e-10
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 27 VLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDAT 86
V V + + F++ + + + F A WCG CK + ++A + +K AKVDA
Sbjct: 11 VDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPME----KIAYEFPTVKFAKVDAD 66
Query: 87 QHTALAEQYGVRGYPTLKFFKKRSIIE 113
++ + + V PT + ++
Sbjct: 67 NNSEIVSKCRVLQLPTFIIARSGKMLG 93
>d2ifqa1 c.47.1.1 (A:1-105) Thioredoxin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 50.5 bits (120), Expect = 1e-09
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 29 VLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDAT 86
+ ++ FQ +++ ++V+F A WCG CK + P + L+ ++ +VD
Sbjct: 5 IESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFH----SLSEKYSNVIFLEVDVD 60
Query: 87 QHTALAEQYGVRGYPTLKFFKKRSIIE 113
+A + V+ PT +FFKK +
Sbjct: 61 DCQDVASECEVKCMPTFQFFKKGQKVG 87
>d1syra_ c.47.1.1 (A:) Thioredoxin {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 103
Score = 49.8 bits (118), Expect = 2e-09
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 28 LVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQ 87
+V +Q F S I +++ ++V+F+A WCG CK++ P Y + + + KVD +
Sbjct: 4 IVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYE----ECSKTYTKMVFIKVDVDE 59
Query: 88 HTALAEQYGVRGYPTLKFFKKRSIIE 113
+ + E+ + PT K +K S ++
Sbjct: 60 VSEVTEKENITSMPTFKVYKNGSSVD 85
>d1qgva_ c.47.1.8 (A:) spliceosomal protein U5-15Kd {Human (Homo
sapiens) [TaxId: 9606]}
Length = 137
Score = 49.7 bits (118), Expect = 3e-09
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Query: 40 EKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRG 99
E+ +++ F W C ++ A ++ + + VD T+ + Y +
Sbjct: 20 EEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKV---KNFAVIYLVDITEVPDFNKMYELYD 76
Query: 100 YPTLKFFKKRSIIEY 114
T+ FF + I
Sbjct: 77 PCTVMFFFRNKHIMI 91
>d1zmaa1 c.47.1.1 (A:1-115) Bacterocin transport accessory protein
Bta {Streptococcus pneumoniae [TaxId: 1313]}
Length = 115
Score = 49.1 bits (116), Expect = 4e-09
Identities = 15/98 (15%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 17 FADDVTEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGH 76
F D++ + + V T Q +++K + C +C++ S + +
Sbjct: 4 FLDNIKD---LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIY 60
Query: 77 DIKLA-KVDATQHTALAEQYGVRGYPTLKFFKKRSIIE 113
I A +YG+ P I
Sbjct: 61 FINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINV 98
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 50.0 bits (119), Expect = 7e-09
Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 29 VLTQDNFQSSIEK---HDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDA 85
+ T + F +IEK I+V Y C L LA + +K K+ A
Sbjct: 104 LETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLE----CLAAEYPMVKFCKIRA 159
Query: 86 TQHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ +T +++ PTL +K +I
Sbjct: 160 S-NTGAGDRFSSDVLPTLLVYKGGELIS 186
>d1woua_ c.47.1.16 (A:) Putative 42-9-9 protein (thioredoxin
containing protein Txnl5) {Human (Homo sapiens) [TaxId:
9606]}
Length = 119
Score = 47.5 bits (112), Expect = 2e-08
Identities = 17/108 (15%), Positives = 28/108 (25%), Gaps = 19/108 (17%)
Query: 27 VLVLTQDNFQSSIEKHD--HILVEFYA-------PWCGHCKQLVPEYSKAALQLATDGHD 77
V V + F ++E+H+ I F WC C Q P + +
Sbjct: 4 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHI---SEG 60
Query: 78 IKLAKVDATQHTAL-------AEQYGVRGYPTLKFFKKRSIIEYGEVT 118
+ + V PTL + + E
Sbjct: 61 CVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKLVESECL 108
>d1ti3a_ c.47.1.1 (A:) Thioredoxin {European aspen (Populus
tremula), thioredoxin H [TaxId: 113636]}
Length = 113
Score = 47.1 bits (111), Expect = 2e-08
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 31 TQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTA 90
+++F+ I+V+F A WC CK + P +++ A + ++ KVD + A
Sbjct: 15 WKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP----NVTFLKVDVDELKA 70
Query: 91 LAEQYGVRGYPTLKFFKKRSIIEY 114
+AE++ V PT F K +++
Sbjct: 71 VAEEWNVEAMPTFIFLKDGKLVDK 94
>d1ep7a_ c.47.1.1 (A:) Thioredoxin {Chlamydomonas reinhardtii
[TaxId: 3055]}
Length = 112
Score = 46.0 bits (108), Expect = 6e-08
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 27 VLVLTQDNFQSSIEK----HDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAK 82
+++ ++ + + + K H I+V+F A WCG CK + P + + + K
Sbjct: 5 IVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDY---AGKVIFLK 61
Query: 83 VDATQHTALAEQYGVRGYPTLKFFKKRSIIEY 114
VD A+AE G+ PT +K +
Sbjct: 62 VDVDAVAAVAEAAGITAMPTFHVYKDGVKADD 93
>d1fb6a_ c.47.1.1 (A:) Thioredoxin {Spinach (Spinacia oleracea),
thioredoxin M [TaxId: 3562]}
Length = 104
Score = 45.7 bits (107), Expect = 7e-08
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 27 VLVLTQDNFQSSIEKHD-HILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDA 85
V + +++ + + + ++V+F+APWCG CK + P + I + K++
Sbjct: 1 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDE---LAKEYSGKIAVYKLNT 57
Query: 86 TQHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ +A QY +R PT+ FFK E
Sbjct: 58 DEAPGIATQYNIRSIPTVLFFKNGERKE 85
>d1sena_ c.47.1.1 (A:) Thioredoxin-like protein p19, TLP19 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 45.6 bits (107), Expect = 1e-07
Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 17 FADDVTEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGH 76
F D + +D + + ++V + WCG CK L P+++++ +
Sbjct: 5 FGDHIHWRT-----LEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHN 59
Query: 77 DIKLAKVDATQHTALAEQYGVRGYPTLKFF 106
+ + ++ + + GY F
Sbjct: 60 FVMV-NLEDEEEPKDEDFSPDGGYIPRILF 88
>d1xfla_ c.47.1.1 (A:) Thioredoxin {Thale cress (Arabidopsis
thaliana) [TaxId: 3702]}
Length = 114
Score = 44.8 bits (105), Expect = 1e-07
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 27 VLVLTQDNFQSSIEKHDH----ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAK 82
+ T + + ++K + ++V+F A WCG C+ + P ++ A +L
Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK---- 64
Query: 83 VDATQHTALAEQYGVRGYPTLKFFKKRSIIEY 114
VD + ++A + ++ PT F K+ I++
Sbjct: 65 VDTDELKSVASDWAIQAMPTFMFLKEGKILDK 96
>d1fo5a_ c.47.1.1 (A:) MJ0307, thioredoxin/glutaredoxin-like protein
{Archaeon Methanococcus jannaschii [TaxId: 2190]}
Length = 85
Score = 44.2 bits (103), Expect = 2e-07
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
Query: 45 ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRGYPTLK 104
+ F +P C HC + A ++ + ++ Q +YG+ PT+
Sbjct: 5 KIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKA---MEYGIMAVPTIV 61
Query: 105 FFKKRSII 112
I
Sbjct: 62 INGDVEFI 69
>d1a8la2 c.47.1.2 (A:120-226) Protein disulfide isomerase, PDI
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 107
Score = 43.4 bits (101), Expect = 5e-07
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 30 LTQDNFQ--SSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHD-IKLAKVDAT 86
L + Q +I++ ILV F P C +C V K A++ G I V+A
Sbjct: 2 LMDETKQAIRNIDQDVRILV-FVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI 60
Query: 87 QHTALAEQYGVRGYPTLKFFKK 108
++ A+QY V P +
Sbjct: 61 EYPEWADQYNVMAVPKIVIQVN 82
>d1wjka_ c.47.1.1 (A:) Thioredoxin-like structure containing protein
C330018D20Rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 43.2 bits (101), Expect = 5e-07
Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 8/73 (10%)
Query: 46 LVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRGYPTLKF 105
L F C C + Q D ++ + +++ E+Y F
Sbjct: 19 LTLFTKAPCPLCDEAKEVL-----QPYKDRFILQEVDITLPENSTWYERYKFD---IPVF 70
Query: 106 FKKRSIIEYGEVT 118
+ V
Sbjct: 71 HLNGQFLMMHRVN 83
>d1hyua4 c.47.1.2 (A:103-198) Alkyl hydroperoxide reductase subunit
F (AhpF), N-terminal domain {Salmonella typhimurium
[TaxId: 90371]}
Length = 96
Score = 43.2 bits (101), Expect = 5e-07
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 41 KHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRGY 100
D +Y+ C +C +V + A IK +D + V G
Sbjct: 14 DGDFEFETYYSLSCHNCPDVVQALNLM----AVLNPRIKHTAIDGGTFQNEITERNVMGV 69
Query: 101 PTLKFFKK 108
P + K
Sbjct: 70 PAVFVNGK 77
>d1xwaa_ c.47.1.1 (A:) Thioredoxin {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 111
Score = 43.4 bits (101), Expect = 6e-07
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 29 VLTQDNFQSSIEKHDH--ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDAT 86
V + + + K ++++F+A WCG CK + P+ + + Q ++ + KVD
Sbjct: 10 VKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQ---FADNVVVLKVDVD 66
Query: 87 QHTALAEQYGVRGYPTLKFFKKRSIIE 113
+ +A +Y + PT F K +E
Sbjct: 67 ECEDIAMEYNISSMPTFVFLKNGVKVE 93
>d1z6na1 c.47.1.1 (A:1-166) Hypothetical protein PA1234 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 166
Score = 36.5 bits (83), Expect = 4e-04
Identities = 13/83 (15%), Positives = 22/83 (26%), Gaps = 5/83 (6%)
Query: 24 EDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKV 83
E L IE+ +LV WC C+ + +I+LA +
Sbjct: 37 ESNGLPSALTERLQRIERRYRLLV-AGEMWCPDCQINLAALDF----AQRLQPNIELAII 91
Query: 84 DATQHTALAEQYGVRGYPTLKFF 106
+ Q +
Sbjct: 92 SKGRAEDDLRQRLALERIAIPLV 114
>d1i5ga_ c.47.1.10 (A:) Tryparedoxin II {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 35.2 bits (80), Expect = 9e-04
Identities = 13/96 (13%), Positives = 23/96 (23%), Gaps = 27/96 (28%)
Query: 45 ILVEFYAPWCGHCKQL-----------------------VPEYSKAALQLATDGHDIKLA 81
+ F A WC + E ++ + L
Sbjct: 31 VFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 90
Query: 82 KVDATQHTALAEQYGVRGYPTLKFFKKRSIIEYGEV 117
D L + V+ PTL + + G +
Sbjct: 91 FEDRKGMEFLTTGFDVKSIPTLVGVEA----DSGNI 122
>d2b5xa1 c.47.1.10 (A:1-143) thiol:disulfide oxidoreductase YkuV
{Bacillus subtilis [TaxId: 1423]}
Length = 143
Score = 34.5 bits (78), Expect = 0.001
Identities = 12/109 (11%), Positives = 32/109 (29%), Gaps = 24/109 (22%)
Query: 30 LTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHT 89
L + + + L+ F++ C CK+ +P+ ++ + + + + +
Sbjct: 17 LNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDL 76
Query: 90 ------------------------ALAEQYGVRGYPTLKFFKKRSIIEY 114
AL + + P F K + +
Sbjct: 77 DPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRH 125
>d2fy6a1 c.47.1.10 (A:33-175) Peptide methionine sulfoxide reductase
MsrA/MsrB, N-terminal domain {Neisseria meningitidis
serogroup A [TaxId: 65699]}
Length = 143
Score = 34.9 bits (79), Expect = 0.001
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 28/112 (25%)
Query: 31 TQDNFQSSIE--KHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQH 88
T DN +S+ K L++F+A WC C + + K A ++ H
Sbjct: 10 TADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH 69
Query: 89 TA--------------------------LAEQYGVRGYPTLKFFKKRSIIEY 114
+A+ + YP+ K ++
Sbjct: 70 EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQR 121
>d1lu4a_ c.47.1.10 (A:) Soluble secreted antigen MPT53
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 134
Score = 29.9 bits (66), Expect = 0.064
Identities = 15/103 (14%), Positives = 28/103 (27%), Gaps = 18/103 (17%)
Query: 30 LTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHT 89
L+ F + + ++ F+ PWC C P S+ A + D
Sbjct: 12 LSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANPAVTFVGIATRADVGAMQ 71
Query: 90 ------------------ALAEQYGVRGYPTLKFFKKRSIIEY 114
+ +Y V P F++ +
Sbjct: 72 SFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTSTF 114
>d1un2a_ c.47.1.13 (A:) Disulfide-bond formation facilitator (DsbA)
{Escherichia coli [TaxId: 562]}
Length = 195
Score = 29.9 bits (67), Expect = 0.081
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 45 ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAK 82
++EF++ +C HC Q + +K+ K
Sbjct: 116 QVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTK 153
>d2dlxa1 c.47.1.24 (A:1-147) UBX domain-containing protein 7 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 147
Score = 29.3 bits (65), Expect = 0.093
Identities = 7/78 (8%), Positives = 26/78 (33%), Gaps = 2/78 (2%)
Query: 35 FQSSIEKHDHILVEFYAPWCGHCKQLVPEY--SKAALQLATDGHDIKLAKVDATQHTALA 92
+ ++ +++ C+ L + ++A + + D+ +
Sbjct: 35 KECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYI 94
Query: 93 EQYGVRGYPTLKFFKKRS 110
+ Y + +P + R+
Sbjct: 95 QFYKLGDFPYVSILDPRT 112
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY,
DsbE) {Escherichia coli [TaxId: 562]}
Length = 136
Score = 28.4 bits (62), Expect = 0.19
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 36 QSSIEKHDHILVEFYAPWCGHCKQ 59
+ + +L+ +A WC +
Sbjct: 14 ADVLTQGKPVLLNVWATWCPTSRA 37
>d1o8xa_ c.47.1.10 (A:) Tryparedoxin I {Crithidia fasciculata
[TaxId: 5656]}
Length = 144
Score = 28.5 bits (62), Expect = 0.19
Identities = 8/76 (10%), Positives = 18/76 (23%), Gaps = 4/76 (5%)
Query: 42 HDHILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVDATQHTALAEQYGVRGYP 101
+ + E + + + L++ + V P
Sbjct: 49 IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIP 108
Query: 102 TLKFFKKRSIIEYGEV 117
TL + G+V
Sbjct: 109 TLIGVDA----DSGDV 120
>d1eeja1 c.47.1.9 (A:61-216) Disulfide bond isomerase, DsbC,
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 156
Score = 27.9 bits (61), Expect = 0.33
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 40 EKHDHILVEFYAPWCGHCKQLVPEYSK 66
+ H++ F CG+C +L + +
Sbjct: 24 PQEKHVITVFTDITCGYCHKLHEQMAD 50
>d1o73a_ c.47.1.10 (A:) Tryparedoxin I {Trypanosoma brucei brucei
[TaxId: 5702]}
Length = 144
Score = 27.6 bits (60), Expect = 0.34
Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 25/108 (23%)
Query: 26 GVLVLTQDNFQSSIE--KHDHILVEFYAPWCG-------HCKQLVPEYS----------- 65
G L + + S+ + + F A WC + ++
Sbjct: 10 GATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLIS 69
Query: 66 -----KAALQLATDGHDIKLAKVDATQHTALAEQYGVRGYPTLKFFKK 108
+ L + + L + +GV PTL
Sbjct: 70 WDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINA 117
>d1fvka_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Escherichia coli [TaxId: 562]}
Length = 188
Score = 28.0 bits (61), Expect = 0.36
Identities = 8/40 (20%), Positives = 16/40 (40%)
Query: 45 ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIKLAKVD 84
++EF++ +C HC Q + +K+ K
Sbjct: 21 QVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYH 60
>d1t3ba1 c.47.1.9 (A:61-210) Disulfide bond isomerase, DsbC,
C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Length = 150
Score = 26.7 bits (58), Expect = 0.72
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 40 EKHDHILVEFYAPWCGHCKQLVPEY 64
+ H++ F C +C L +
Sbjct: 24 KNEKHVVTVFMDITCHYCHLLHQQL 48
>d1tbna_ g.49.1.1 (A:) Protein kinase c-gamma {Rat (Rattus rattus)
[TaxId: 10117]}
Length = 66
Score = 25.8 bits (56), Expect = 0.80
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 36 QSSIEKHDHILVE--FYAP-WCGHCKQLVPEYSKAALQ 70
Q+ ++ H + +P +C HC L+ ++
Sbjct: 1 QTDDPRNKHKFRLHSYSSPTFCDHCGSLLYGLVHQGMK 38
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 26.5 bits (57), Expect = 1.0
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 15 VVFADDVTEEDGVLVLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKAALQLATD 74
V+ A V E G+ + + ++EF C +C++ E + Q
Sbjct: 5 VIDATKVNTETGLHIGESNA--------PVKMIEFINVRCPYCRKWFEESEELLAQSVKS 56
Query: 75 GHDIKLAKVDATQHTALA 92
G ++ K+ + +L
Sbjct: 57 GKVERIIKLFDKEKESLQ 74
>d1t4za_ c.47.1.15 (A:) Adaptive-response sensory-kinase SasA,
N-terminal domain {Synechococcus elongatus [TaxId:
32046]}
Length = 105
Score = 25.9 bits (57), Expect = 1.1
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 75 GHDIKLAKVDATQHTALAEQYGVRGYPTL 103
I L ++ L E Y + P L
Sbjct: 42 TVPISLQVINVADQPQLVEYYRLVVTPAL 70
>d1beda_ c.47.1.13 (A:) Disulfide-bond formation facilitator
(DsbA) {Vibrio cholerae [TaxId: 666]}
Length = 181
Score = 26.5 bits (57), Expect = 1.2
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 45 ILVEFYAPWCGHCKQLVPEYSKAALQLATDGHDIK 79
++ EF++ +C HC P ++ QL K
Sbjct: 21 VVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQK 55
>d2hlya1 d.3.1.19 (A:5-206) Hypothetical protein Atu2299
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 202
Score = 25.6 bits (56), Expect = 2.0
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 15 VVFADDVTEEDGVLVLTQDNFQSSIEKHDHILVEFYAP 52
++FAD EDG + +NF +E ++F AP
Sbjct: 65 LLFADHR--EDGYVTGAGENFHCWVEADGW-AIDFMAP 99
>d2fa8a1 c.47.1.23 (A:4-89) Hypothetical protein Atu0228
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 86
Score = 24.2 bits (53), Expect = 3.7
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 119 SVEYCYQRNWHKRAV 133
++ YC Q NW RA
Sbjct: 6 AIRYCTQCNWLLRAG 20
>d1vr6a1 c.1.10.4 (A:1-338)
3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
(DAHP synthase, AroG) {Thermotoga maritima [TaxId:
2336]}
Length = 338
Score = 24.7 bits (53), Expect = 4.7
Identities = 10/45 (22%), Positives = 16/45 (35%), Gaps = 6/45 (13%)
Query: 55 GHCKQLVPEYSKAALQLATDG------HDIKLAKVDATQHTALAE 93
G + LV S+AA+ + G + + A D Q
Sbjct: 274 GGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFEL 318
>d1kuta_ d.143.1.1 (A:) SAICAR synthase {Thermotoga maritima
[TaxId: 2336]}
Length = 224
Score = 24.3 bits (52), Expect = 7.1
Identities = 9/66 (13%), Positives = 18/66 (27%), Gaps = 9/66 (13%)
Query: 14 LVVFADDVTEEDGVL---------VLTQDNFQSSIEKHDHILVEFYAPWCGHCKQLVPEY 64
L+ F DD+T DG+ + + + + + V
Sbjct: 12 LLEFKDDITAGDGLKHDVLTGKGSICAETTAILMKYLSEKGIKTHLVEYIPPRTLKVIPL 71
Query: 65 SKAALQ 70
L+
Sbjct: 72 KMFPLE 77
>d1f2ri_ d.15.2.1 (I:) Inhibitor of caspase-activated DNase
(ICAD), DFF45, N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 100
Score = 23.3 bits (50), Expect = 7.4
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 21 VTEEDGVLVLTQDNFQS 37
V EDG +V D F
Sbjct: 62 VLAEDGTIVDDDDYFLC 78
>d1fusa_ d.1.1.4 (A:) RNase F1 {Fusarium moniliforme [TaxId:
117187]}
Length = 106
Score = 23.3 bits (50), Expect = 8.4
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 76 HDIKLAKVDATQHTALAEQYGVRGYP 101
++ A A Q+ + G YP
Sbjct: 14 SQVRAAANAACQYYQNDDTAGSSTYP 39
>d1alna1 c.97.1.1 (A:1-150) Two-domain cytidine deaminase
{Escherichia coli [TaxId: 562]}
Length = 150
Score = 23.7 bits (51), Expect = 8.8
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 34 NFQSSIEKHDHILVEFYAPWCGHCKQLVPEYSKA 67
+ S EK + Y P CGHC+Q + E +
Sbjct: 110 HAWLSGEKALAAITVNYTP-CGHCRQFMNELNSG 142
>d1v58a1 c.47.1.9 (A:62-230) Thiol:disulfide interchange protein
DsbG, C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 169
Score = 23.6 bits (50), Expect = 9.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 43 DHILVEFYAPWCGHCKQLVPE 63
I+ F P+C +CKQ +
Sbjct: 37 PVIVYVFADPFCPYCKQFWQQ 57
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.136 0.408
Gapped
Lambda K H
0.267 0.0496 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 527,080
Number of extensions: 22174
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 66
Length of query: 142
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 65
Effective length of database: 1,350,386
Effective search space: 87775090
Effective search space used: 87775090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (22.8 bits)