BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7944
(231 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q17BU3|KIF1A_AEDAE Kinesin-like protein unc-104 OS=Aedes aegypti GN=unc-104 PE=3 SV=1
Length = 1644
Score = 196 bits (497), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 85/112 (75%), Positives = 102/112 (91%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+FVYLSNL+YP+P
Sbjct: 812 RQRLELMREMYHNEAELSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFVYLSNLLYPVP 871
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTG 151
L+ KVAIVNE+GDV+G+L++AVQ V DEE+ D VKQSARI+FD++Q G
Sbjct: 872 LVHKVAIVNERGDVRGYLRVAVQPVMDEENADFNNGVKQSARIVFDEEQNGG 923
>sp|Q7PHR1|KIF1A_ANOGA Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3
SV=3
Length = 1644
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 119/166 (71%), Gaps = 10/166 (6%)
Query: 15 PEPYIKEDFLQCLNPKFSFTNLLPSRQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPF 74
P + + N + +L RQRLE+MREMYHNEAE+SPTSPDYN+ESLTGGDPF
Sbjct: 785 PRTTVAVEVTDTKNGATHYWSLEKLRQRLELMREMYHNEAELSPTSPDYNVESLTGGDPF 844
Query: 75 YDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTG 134
YDRFPWFR+VGR+FVYLSNL+YP+PL+ KVAIVNE+GDV+G+L++AVQ V DEE+ D +
Sbjct: 845 YDRFPWFRMVGRSFVYLSNLLYPVPLVHKVAIVNERGDVRGYLRVAVQPVMDEENADFSN 904
Query: 135 TVKQSARIIFDDDQQTGR----------NNKKAVEDSGHQGDKVEE 170
VKQSARI+FD++Q ++K +E G K+EE
Sbjct: 905 GVKQSARILFDEEQNGQHKVPKIRTIPDKDEKYIEGGNEMGTKLEE 950
>sp|Q28WQ1|KIF1A_DROPS Kinesin-like protein unc-104 OS=Drosophila pseudoobscura
pseudoobscura GN=unc-104 PE=3 SV=1
Length = 1671
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 7/138 (5%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
RQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+P
Sbjct: 809 RQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVP 868
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR----NNK 155
L+ KVAIVNE+GDV+G+L+IAVQ V DEES D VKQSAR++F++D + N K
Sbjct: 869 LVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDAKPKYRALNEK 928
Query: 156 KAVE---DSGHQGDKVEE 170
V+ D+G K+EE
Sbjct: 929 DDVQRYIDNGGHDSKLEE 946
>sp|A1ZAJ2|KIF1A_DROME Kinesin-like protein unc-104 OS=Drosophila melanogaster GN=unc-104
PE=1 SV=1
Length = 1670
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 7/138 (5%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
RQRLE+MREMYHNEAEMSPTSPDYN+ESLTGGDPFYDRFPWFR+VGR+F+YLSNL+YP+P
Sbjct: 809 RQRLELMREMYHNEAEMSPTSPDYNVESLTGGDPFYDRFPWFRMVGRSFIYLSNLLYPVP 868
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR----NNK 155
L+ KVAIVNE+GDV+G+L+IAVQ V DEES D VKQSAR++F++D + N K
Sbjct: 869 LVHKVAIVNERGDVRGYLRIAVQPVLDEESIDFNNGVKQSARLVFNEDDAKPKYRALNEK 928
Query: 156 KAVE---DSGHQGDKVEE 170
V+ D+G K+EE
Sbjct: 929 DDVQRYIDNGGLDSKLEE 946
>sp|P33173|KIF1A_MOUSE Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2
Length = 1695
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/225 (40%), Positives = 124/225 (55%), Gaps = 41/225 (18%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
RQRL++MREMY AE+ + + +TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+P
Sbjct: 806 RQRLDLMREMYDRAAEVPSSVVEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPVP 865
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDDDQ-------- 148
L+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D V+QS A+I FDD
Sbjct: 866 LVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDDQHFEKFQSES 925
Query: 149 ---------QTGRNNKKAVE------DSGHQGDKVEENPPCTSSMYAFPEENGLWFPEKL 193
T + + VE D+G D+V N C+ A P E + PEK
Sbjct: 926 CPVVGMSRSGTSQEELRIVEGQGQGADAGPSADEVNNN-TCS----AVPPEGLMDSPEKA 980
Query: 194 -------TYLD--KIGTVLKLRLQEYVSCCMPADLT-FFSWLNFL 228
T LD ++G+ R+ + + A+ F NF+
Sbjct: 981 ALDGPLDTALDHLRLGSTFTFRVTVLQASSISAEYADIFCQFNFI 1025
>sp|Q12756|KIF1A_HUMAN Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=1 SV=2
Length = 1690
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 86/112 (76%), Gaps = 3/112 (2%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
RQRL++MREMY AE+ + + +TGGDPFYDRFPWFRLVGRAFVYLSNL+YP+P
Sbjct: 806 RQRLDLMREMYDRAAEVPSSVIEDCDNVVTGGDPFYDRFPWFRLVGRAFVYLSNLLYPVP 865
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVT-DEESTDLTGTVKQS--ARIIFDDDQ 148
L+ +VAIV+EKG+VKG L++AVQ ++ DEE+ D V+QS A+I FDD
Sbjct: 866 LVHRVAIVSEKGEVKGFLRVAVQAISADEEAPDYGSGVRQSGTAKISFDDQH 917
>sp|P23678|UN104_CAEEL Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104
PE=2 SV=3
Length = 1584
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 83/105 (79%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIP 99
+QRLE MR+MY +AEMSP D +++L G DPFYDRFPWFR+VGRAFVYL+NL++ +P
Sbjct: 782 KQRLEAMRDMYETDAEMSPADGDPMMDALMGTDPFYDRFPWFRMVGRAFVYLNNLLHNVP 841
Query: 100 LIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIF 144
LI KVA+VNEKG+VKG+LK+A++ V +E + V+Q+A++ F
Sbjct: 842 LIHKVAVVNEKGEVKGYLKVAIEPVQKDEVINQKKGVRQTAKLHF 886
>sp|Q60575|KIF1B_MOUSE Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2
Length = 1816
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 48 EMYHNEAEMSPTSPDYNIESLT-----GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQ 102
E + +EA + T D E + G DPFYDR PWF LVGRAFVYLSNL+YP+PLI
Sbjct: 932 EDFDDEAFVDDTGSDAGTEEGSELFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIH 991
Query: 103 KVAIVNEKGDVKGHLKIAVQ-IVTDEESTDLTGTVKQS--ARIIFDDD 147
+VAIV+EKG+V+G L++AVQ I DEE+ D ++QS A+I FD++
Sbjct: 992 RVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNE 1039
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVY 90
+QRL++MREMY E++ ++ D + ++TG DPFYDRF WF+LVG + ++
Sbjct: 846 KQRLDLMREMYDRAGEVASSAQDDSETTMTGSDPFYDRFHWFKLVGSSPIF 896
>sp|O88658|KIF1B_RAT Kinesin-like protein KIF1B OS=Rattus norvegicus GN=Kif1b PE=1 SV=2
Length = 1816
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 8/108 (7%)
Query: 48 EMYHNEAEMSPTSPDYNIESLT-----GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQ 102
E + +EA + T D E + G DPFYDR PWF LVGRAFVYLSNL+YP+PLI
Sbjct: 932 EDFDDEAFVDDTGSDAGTEEGSELFSDGHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIH 991
Query: 103 KVAIVNEKGDVKGHLKIAVQ-IVTDEESTDLTGTVKQS--ARIIFDDD 147
+VAIV+EKG+V+G L++AVQ I DEE+ D ++QS A+I FD++
Sbjct: 992 RVAIVSEKGEVRGFLRVAVQAIAADEEAPDYGSGIRQSGTAKISFDNE 1039
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVY 90
+QRL++MREMY E+ + D + ++TG DPFYDRF WF+LVG + ++
Sbjct: 846 KQRLDLMREMYDRAGEVGSNAQDDSETTMTGSDPFYDRFHWFKLVGSSPIF 896
>sp|O60333|KIF1B_HUMAN Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5
Length = 1816
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 65/81 (80%), Gaps = 3/81 (3%)
Query: 70 GGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQKVAIVNEKGDVKGHLKIAVQ-IVTDEE 128
G DPFYDR PWF LVGRAFVYLSNL+YP+PLI +VAIV+EKG+V+G L++AVQ I DEE
Sbjct: 959 GHDPFYDRSPWFILVGRAFVYLSNLLYPVPLIHRVAIVSEKGEVRGFLRVAVQAIAADEE 1018
Query: 129 STDLTGTVKQS--ARIIFDDD 147
+ D ++QS A+I FD++
Sbjct: 1019 APDYGSGIRQSGTAKISFDNE 1039
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 40 RQRLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVY 90
+QRL++MREMY EM+ ++ D + ++TG DPFYDRF WF+LVG + ++
Sbjct: 846 KQRLDLMREMYDRAGEMASSAQDESETTVTGSDPFYDRFHWFKLVGSSPIF 896
>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1
Length = 1826
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 42 RLEMMREMYHNEAEMSPTSPDYNIES-LTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPL 100
RL MR++Y E +P I S DPFYD L+G A V+L +L Y + L
Sbjct: 759 RLLDMRDLYQEWKECEEDNP--VIRSYFKRADPFYDEQENLSLIGVANVFLESLFYDVKL 816
Query: 101 IQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGR 152
V I+N+KG+V G L + V ++ + + G + A + F+ + Q +
Sbjct: 817 QYAVPIINQKGEVAGRLHVEVMRLSGDVGERIAGG-DEVAEVPFEKETQENK 867
>sp|Q9NGQ2|KIF1_DICDI Kinesin-related protein 1 OS=Dictyostelium discoideum GN=kif1 PE=1
SV=1
Length = 2205
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 42 RLEMMREMYHNEAEMSPTSPDYNIESLTGGDPFYDRFPWFRLVGRAFVYLSNLMYPIPLI 101
R+ +MRE+Y N+ + P+ DPF F L+G + VYL N +Y +
Sbjct: 788 RIYLMRELYQNDGRLDTELPE---------DPFQFTFTKDSLIGVSHVYLKNTLYLVESN 838
Query: 102 QKVAIVNEKGDVKGHLKIAVQIVTDEESTDLT 133
+ V I++E G+ KG+L + V STD+T
Sbjct: 839 RPVPILDENGNQKGYLNLLV----SSSSTDIT 866
>sp|Q9H1H9|KI13A_HUMAN Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2
Length = 1805
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 46 MREMYHNEAEMSPTSPDYNIESLTG--GDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQK 103
MR++Y E P + + L G GDPFY+ L+G A V+L L + L
Sbjct: 755 MRDLYQEWKEKVPEA-----KRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYA 809
Query: 104 VAIVNEKGDVKGHLKIAVQIVT 125
V I++++G+V G L + V VT
Sbjct: 810 VPIISQQGEVAGRLHVEVMRVT 831
>sp|Q9EQW7|KI13A_MOUSE Kinesin-like protein KIF13A OS=Mus musculus GN=Kif13a PE=1 SV=1
Length = 1749
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 46 MREMYHNEAEMSPTSPDYNIESLTG--GDPFYDRFPWFRLVGRAFVYLSNLMYPIPLIQK 103
MR++Y E P + + L G GDPFY+ L+G A V+L L + L
Sbjct: 755 MRDLYQEWKENVPEA-----KRLYGKRGDPFYEAQENHNLIGVANVFLECLFCDVKLQYA 809
Query: 104 VAIVNEKGDVKGHLKIAVQIVTDEESTDLTGTV 136
V I++++G+V G L + V T +TGT+
Sbjct: 810 VPIISQQGEVAGRLHVEV--------TRITGTI 834
>sp|A8MD44|METK_CALMQ S-adenosylmethionine synthase OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=mat
PE=3 SV=1
Length = 408
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 87 AFVYL-SNLMYPI--PLIQKVAIVNEKGDVKGHLKIAVQIVTDEESTDLT 133
+VYL S + PI PLI V I+ +G+V +K + +TDEE + +T
Sbjct: 345 VYVYLLSQIGKPIDNPLIANVEIITNEGEVTSEMKREAEAITDEEISRVT 394
>sp|Q14966|ZN638_HUMAN Zinc finger protein 638 OS=Homo sapiens GN=ZNF638 PE=1 SV=2
Length = 1978
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 22/121 (18%)
Query: 107 VNEKGDVKGHLK---IAVQIVTDEESTDLTGTVKQSARIIFDDDQQTGRNNKKAVEDSGH 163
+ E+ D HL + V V DEE ++ VK S + +++
Sbjct: 1604 IGEEEDAAAHLAQALVTVDEVIDEEELNMEEMVKNSNSLF-------------TLDELID 1650
Query: 164 QGDKVEENPPCTSSMYAFPEENGLWFPEKLTYLDKIGTVLKLRLQEYVSCCMPADLTFFS 223
Q D + + P ++ + EE L E+L +D+IG V +L L E AD+TF +
Sbjct: 1651 QDDCISHSEPKDVTVLSVAEEQDLLKQERLVTVDEIGEVEELPLNES------ADITFAT 1704
Query: 224 W 224
Sbjct: 1705 L 1705
>sp|O14233|RNA14_SCHPO mRNA 3'-end-processing protein rna14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rna14 PE=3 SV=1
Length = 733
Score = 31.2 bits (69), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 133 TGTVKQSARIIFDDDQQTGRNNKKAVED-SGHQGDKVEENPPCTSSMYAFPEENG 186
T TV +S + +G K+ D G DK++ENP SS YA EE G
Sbjct: 28 TSTVNESDVLATSTTASSGVKRKRLPNDLVGQLRDKIQENPNDISSWYALVEEYG 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,397,952
Number of Sequences: 539616
Number of extensions: 3884888
Number of successful extensions: 8306
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8286
Number of HSP's gapped (non-prelim): 30
length of query: 231
length of database: 191,569,459
effective HSP length: 114
effective length of query: 117
effective length of database: 130,053,235
effective search space: 15216228495
effective search space used: 15216228495
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)