Query psy795
Match_columns 109
No_of_seqs 117 out of 1570
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 22:57:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy795.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/795hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i1n_A Discs, large homolog 3; 99.8 2E-17 6.8E-22 97.0 10.9 92 11-107 3-96 (102)
2 2fe5_A Presynaptic protein SAP 99.7 3.6E-17 1.2E-21 94.5 10.8 86 15-105 6-93 (94)
3 1x5q_A LAP4 protein; PDZ domai 99.7 1.6E-16 5.3E-21 94.4 13.1 97 9-109 12-109 (110)
4 2jre_A C60-1 PDZ domain peptid 99.7 1.2E-16 3.9E-21 94.6 11.8 101 3-108 5-107 (108)
5 4amh_A Disks large homolog 1; 99.7 6.4E-17 2.2E-21 95.7 10.6 84 18-106 8-93 (106)
6 2w4f_A Protein LAP4; structura 99.7 8.7E-17 3E-21 93.4 11.0 93 12-108 3-96 (97)
7 2awx_A Synapse associated prot 99.7 7.8E-17 2.7E-21 95.0 10.9 88 15-107 6-95 (105)
8 2jik_A Synaptojanin-2 binding 99.7 1.7E-16 5.7E-21 92.9 11.4 90 11-107 8-99 (101)
9 2byg_A Channel associated prot 99.7 1.1E-16 3.8E-21 96.2 10.8 89 11-106 25-115 (117)
10 1uep_A Membrane associated gua 99.7 3.1E-17 1.1E-21 96.5 8.2 90 7-106 4-97 (103)
11 2q3g_A PDZ and LIM domain prot 99.7 7.3E-17 2.5E-21 92.5 9.6 85 11-106 2-87 (89)
12 2uzc_A Human pdlim5, PDZ and L 99.7 7.3E-17 2.5E-21 92.2 9.5 83 13-106 4-87 (88)
13 1uhp_A Hypothetical protein KI 99.7 2.4E-16 8.2E-21 93.2 12.0 96 10-107 6-103 (107)
14 2vwr_A Ligand of NUMB protein 99.7 2.1E-16 7.3E-21 91.5 11.0 84 13-107 6-91 (95)
15 1rgw_A ZAsp protein; PDZ, cyph 99.7 8.5E-17 2.9E-21 91.3 9.1 74 22-105 10-84 (85)
16 1wha_A KIAA0147 protein, scrib 99.7 1.7E-16 5.8E-21 93.6 10.7 91 11-105 6-98 (105)
17 2fne_A Multiple PDZ domain pro 99.7 6.2E-17 2.1E-21 97.4 8.6 90 12-108 25-116 (117)
18 1m5z_A GRIP, AMPA receptor int 99.7 6E-16 2.1E-20 88.9 12.4 84 10-104 6-90 (91)
19 2opg_A Multiple PDZ domain pro 99.7 3.1E-16 1.1E-20 91.3 11.1 85 14-107 6-92 (98)
20 2he4_A Na(+)/H(+) exchange reg 99.7 2.1E-16 7.2E-21 90.7 10.0 78 18-106 10-88 (90)
21 2r4h_A Membrane-associated gua 99.7 2.1E-16 7.3E-21 94.3 10.3 83 15-107 27-111 (112)
22 2pa1_A PDZ and LIM domain prot 99.7 2.6E-16 8.7E-21 89.8 10.2 82 14-106 4-86 (87)
23 2jil_A GRIP1 protein, glutamat 99.7 1.9E-16 6.4E-21 92.0 9.8 91 12-108 3-95 (97)
24 1n7e_A AMPA receptor interacti 99.7 2.9E-16 1E-20 91.3 10.3 84 15-108 8-93 (97)
25 1ujd_A KIAA0559 protein; PDZ d 99.7 6.3E-16 2.2E-20 92.8 11.9 80 23-107 30-111 (117)
26 1ueq_A Membrane associated gua 99.7 6.9E-16 2.4E-20 93.4 11.9 86 11-106 18-107 (123)
27 3axa_A Afadin, nectin-3, prote 99.7 2E-16 7E-21 93.3 9.3 88 12-107 11-100 (106)
28 3b76_A E3 ubiquitin-protein li 99.7 7.6E-16 2.6E-20 92.8 11.9 87 11-105 25-113 (118)
29 2g5m_B Neurabin-2; spinophilin 99.7 2.4E-16 8.2E-21 94.0 9.5 90 11-107 3-97 (113)
30 1um1_A KIAA1849 protein, RSGI 99.7 5E-16 1.7E-20 92.2 10.7 89 11-106 7-97 (110)
31 1i16_A Interleukin 16, LCF; cy 99.7 9.5E-17 3.2E-21 98.1 7.7 88 12-106 29-119 (130)
32 2iwo_A Multiple PDZ domain pro 99.7 7.3E-17 2.5E-21 97.4 6.9 89 11-107 25-115 (120)
33 2q9v_A Membrane-associated gua 99.7 3.4E-16 1.2E-20 89.8 9.4 82 14-105 4-89 (90)
34 1d5g_A Human phosphatase HPTP1 99.7 6.4E-16 2.2E-20 89.6 10.6 83 17-106 10-94 (96)
35 2i04_A Membrane-associated gua 99.7 4.8E-16 1.6E-20 88.3 9.8 79 15-103 3-85 (85)
36 2eno_A Synaptojanin-2-binding 99.7 6.7E-16 2.3E-20 93.0 10.9 91 12-107 17-109 (120)
37 2pkt_A PDZ and LIM domain prot 99.7 4.9E-16 1.7E-20 89.3 9.7 77 22-108 12-89 (91)
38 1wg6_A Hypothetical protein (r 99.7 1.2E-16 4E-21 97.4 7.4 97 6-108 19-125 (127)
39 2koj_A Partitioning defective 99.7 9.6E-16 3.3E-20 91.1 11.2 92 9-107 8-103 (111)
40 1uez_A KIAA1526 protein; PDZ d 99.7 4.1E-16 1.4E-20 91.3 9.3 88 9-106 7-94 (101)
41 1wf8_A Neurabin-I; PDZ domain, 99.7 4E-16 1.4E-20 92.2 9.4 89 11-106 8-101 (107)
42 1g9o_A NHE-RF; PDZ domain, com 99.7 8.7E-16 3E-20 88.2 10.3 76 18-104 9-85 (91)
43 2djt_A Unnamed protein product 99.7 2.2E-16 7.5E-21 92.8 7.6 90 10-107 9-100 (104)
44 1q7x_A PDZ2B domain of PTP-BAS 99.7 3.3E-16 1.1E-20 92.7 8.1 89 13-108 10-105 (108)
45 3cbz_A Dishevelled-2; PDZ doma 99.7 3.2E-16 1.1E-20 92.9 8.0 79 21-107 15-98 (108)
46 2iwn_A Multiple PDZ domain pro 99.7 1.1E-15 3.9E-20 88.5 10.2 91 11-107 3-95 (97)
47 1mfg_A ERB-B2 interacting prot 99.7 1.8E-15 6E-20 87.6 10.8 88 14-105 5-93 (95)
48 2eeg_A PDZ and LIM domain prot 99.7 3.1E-16 1E-20 90.8 7.6 83 13-106 9-92 (94)
49 2qg1_A Multiple PDZ domain pro 99.7 9.9E-16 3.4E-20 88.1 9.7 74 22-106 15-90 (92)
50 3egg_C Spinophilin; PP1, serin 99.7 9.7E-16 3.3E-20 97.6 10.4 90 11-104 79-170 (170)
51 2f5y_A Regulator of G-protein 99.7 1.6E-15 5.6E-20 87.2 10.3 77 17-107 8-85 (91)
52 2v90_A PDZ domain-containing p 99.7 7.9E-16 2.7E-20 89.2 8.7 81 19-107 10-91 (96)
53 3i4w_A Disks large homolog 4; 99.7 1.3E-15 4.5E-20 89.4 9.7 76 19-105 18-95 (104)
54 1ihj_A INAD; intermolecular di 99.7 2.4E-15 8.1E-20 87.5 10.7 92 10-106 5-98 (98)
55 3sfj_A TAX1-binding protein 3; 99.7 5.3E-15 1.8E-19 86.8 12.0 83 22-104 18-104 (104)
56 1wf7_A Enigma homologue protei 99.6 2E-16 6.7E-21 93.0 5.4 76 22-107 14-90 (103)
57 1wfv_A Membrane associated gua 99.6 1E-16 3.5E-21 94.0 4.2 87 11-107 10-98 (103)
58 3r68_A Na(+)/H(+) exchange reg 99.6 1.2E-15 4E-20 88.3 8.6 77 19-106 12-89 (95)
59 2kom_A Partitioning defective 99.6 4.5E-15 1.5E-19 89.6 11.4 89 10-105 28-120 (121)
60 2dkr_A LIN-7 homolog B; LIN-7B 99.6 1.2E-15 4E-20 87.9 8.5 76 20-105 13-90 (93)
61 2dmz_A INAD-like protein; PDZ 99.6 2.3E-15 7.9E-20 91.6 9.8 93 9-106 12-107 (129)
62 1wi2_A Riken cDNA 2700099C19; 99.6 6.3E-15 2.1E-19 86.7 11.3 86 11-107 16-101 (104)
63 2d92_A INAD-like protein; PDZ 99.6 1E-15 3.5E-20 90.7 7.7 90 8-105 13-105 (108)
64 3gsl_A Disks large homolog 4; 99.6 5.9E-15 2E-19 94.9 11.7 90 11-105 4-95 (196)
65 1qav_A Alpha-1 syntrophin (res 99.6 6E-15 2E-19 84.6 10.5 83 11-104 5-89 (90)
66 2kpk_A Membrane-associated gua 99.6 2.8E-15 9.5E-20 91.4 9.6 85 11-105 17-105 (129)
67 2vsp_A PDZ domain-containing p 99.6 4.9E-16 1.7E-20 89.4 5.8 83 12-107 5-88 (91)
68 3gge_A PDZ domain-containing p 99.6 4E-15 1.4E-19 86.1 9.5 79 15-105 8-90 (95)
69 1wfg_A Regulating synaptic mem 99.6 2.6E-15 9E-20 91.8 9.1 80 21-107 46-129 (131)
70 1x6d_A Interleukin-16; PDZ dom 99.6 3.7E-15 1.3E-19 89.6 9.5 80 19-107 23-105 (119)
71 1vb7_A PDZ and LIM domain 2; P 99.6 6.5E-16 2.2E-20 89.4 5.9 78 21-108 14-92 (94)
72 3o46_A Maguk P55 subfamily mem 99.6 3.8E-15 1.3E-19 85.9 9.1 83 11-106 5-89 (93)
73 4e34_A Golgi-associated PDZ an 99.6 6.3E-15 2.2E-19 83.9 9.7 81 12-103 4-86 (87)
74 2daz_A INAD-like protein; PDZ 99.6 5E-15 1.7E-19 89.7 9.8 82 16-106 29-112 (124)
75 2eeh_A PDZ domain-containing p 99.6 1.4E-14 4.8E-19 84.6 11.3 86 11-107 11-96 (100)
76 3hpk_A Protein interacting wit 99.6 1.1E-14 3.7E-19 88.3 11.1 86 9-104 16-104 (125)
77 3bpu_A Membrane-associated gua 99.6 5E-15 1.7E-19 84.5 9.1 82 12-106 3-87 (88)
78 2jxo_A Ezrin-radixin-moesin-bi 99.6 2.1E-15 7.2E-20 87.7 7.5 78 18-106 15-94 (98)
79 1nf3_C PAR-6B; semi-CRIB motif 99.6 5.2E-15 1.8E-19 90.1 9.5 96 9-106 28-126 (128)
80 2edp_A Fragment, shroom family 99.6 1.8E-15 6E-20 88.5 7.1 87 8-106 7-95 (100)
81 2qkv_A Inactivation-NO-after-p 99.6 7E-15 2.4E-19 85.4 9.5 83 10-105 6-91 (96)
82 2h2b_A Tight junction protein 99.6 1.8E-14 6E-19 85.0 11.4 91 11-106 6-98 (107)
83 2dc2_A GOPC, golgi associated 99.6 5.8E-15 2E-19 86.8 8.9 84 11-105 10-95 (103)
84 2vz5_A TAX1-binding protein 3; 99.6 2.8E-14 9.4E-19 88.1 12.3 86 22-107 37-126 (139)
85 3qe1_A Sorting nexin-27, G pro 99.6 1E-14 3.5E-19 86.1 9.9 94 12-107 8-104 (107)
86 1wi4_A Synip, syntaxin binding 99.6 8.4E-15 2.9E-19 87.0 9.4 85 11-106 16-106 (109)
87 2d90_A PDZ domain containing p 99.6 1.6E-15 5.3E-20 88.9 6.2 83 11-106 7-90 (102)
88 2dm8_A INAD-like protein; PDZ 99.6 1.5E-15 5.3E-20 90.8 6.3 83 16-107 21-105 (116)
89 2o2t_A Multiple PDZ domain pro 99.6 3.5E-15 1.2E-19 89.4 7.6 91 10-108 20-113 (117)
90 2db5_A INAD-like protein; PDZ 99.6 5.2E-15 1.8E-19 90.0 8.4 88 11-106 26-116 (128)
91 1tp5_A Presynaptic density pro 99.6 1.1E-14 3.7E-19 87.5 9.7 82 11-105 15-98 (119)
92 2csj_A TJP2 protein; PDZ domai 99.6 5.4E-15 1.8E-19 88.7 8.3 90 12-106 14-105 (117)
93 2dls_A PDZ-rhogef, RHO guanine 99.6 1.6E-14 5.4E-19 83.4 9.9 80 11-106 9-88 (93)
94 1uju_A Scribble; PDZ domain, c 99.6 3.6E-15 1.2E-19 88.6 7.3 94 11-106 10-105 (111)
95 3khf_A Microtubule-associated 99.6 4.4E-15 1.5E-19 86.5 7.5 85 20-107 10-95 (99)
96 2ego_A General receptor for ph 99.6 2.6E-14 8.8E-19 82.9 10.7 89 12-104 6-95 (96)
97 1n7t_A 99-MER peptide of densi 99.6 4.7E-15 1.6E-19 87.0 7.5 87 15-105 14-101 (103)
98 1ufx_A KIAA1526 protein; PDZ d 99.6 3.6E-15 1.2E-19 87.8 7.0 85 11-106 7-98 (103)
99 1whd_A RGS3, regulator of G-pr 99.6 2E-15 6.7E-20 88.3 5.8 85 10-108 13-98 (100)
100 3l4f_D SH3 and multiple ankyri 99.6 9.3E-15 3.2E-19 89.5 8.9 85 21-105 37-124 (132)
101 1kwa_A Hcask/LIN-2 protein; PD 99.6 2.6E-14 9E-19 81.7 10.1 73 22-106 12-86 (88)
102 3nfk_A Tyrosine-protein phosph 99.6 1.4E-14 4.9E-19 85.4 9.1 83 11-104 18-107 (107)
103 3k1r_A Harmonin; protein-prote 99.6 2.7E-14 9.2E-19 92.3 11.1 86 10-106 84-169 (192)
104 2la8_A Inactivation-NO-after-p 99.6 9.6E-15 3.3E-19 86.3 8.3 79 14-105 4-85 (106)
105 1va8_A Maguk P55 subfamily mem 99.6 1.8E-14 6.2E-19 85.9 9.5 73 23-108 37-111 (113)
106 3soe_A Membrane-associated gua 99.6 1.6E-14 5.4E-19 86.3 9.2 81 12-107 12-95 (113)
107 2dlu_A INAD-like protein; PDZ 99.6 9.5E-15 3.3E-19 86.8 8.1 76 19-106 22-99 (111)
108 2vsv_A Rhophilin-2; scaffold p 99.6 2.5E-14 8.5E-19 85.0 9.7 75 19-107 30-106 (109)
109 1r6j_A Syntenin 1; PDZ, membra 99.6 2.2E-14 7.4E-19 81.2 9.0 65 22-103 15-80 (82)
110 1q3o_A Shank1; PDZ, GKAP, pept 99.6 3.7E-14 1.3E-18 84.0 10.5 86 20-105 16-104 (109)
111 1v62_A KIAA1719 protein; struc 99.6 9.2E-15 3.2E-19 87.7 7.9 86 11-106 16-103 (117)
112 2cs5_A Tyrosine-protein phosph 99.6 1.2E-14 4.2E-19 87.3 8.4 89 7-106 12-107 (119)
113 2qbw_A PDZ-fibronectin fusion 99.6 2.5E-14 8.7E-19 92.2 10.4 81 23-106 2-86 (195)
114 2eei_A PDZ domain-containing p 99.6 2.2E-15 7.5E-20 88.8 4.9 83 11-106 9-92 (106)
115 2kv8_A RGS12, regulator of G-p 99.6 4E-15 1.4E-19 84.1 5.8 74 17-104 7-81 (83)
116 3ngh_A PDZ domain-containing p 99.6 1.5E-14 5.2E-19 85.2 8.1 81 14-106 5-86 (106)
117 2ehr_A INAD-like protein; PDZ 99.6 3E-14 1E-18 85.4 9.3 92 12-105 17-110 (117)
118 1uf1_A KIAA1526 protein; PDZ d 99.6 1.2E-13 4.2E-18 83.9 12.0 86 11-107 21-106 (128)
119 1ujv_A Membrane associated gua 99.6 3.5E-14 1.2E-18 82.5 8.7 84 10-108 8-94 (96)
120 1uew_A Membrane associated gua 99.6 2.2E-14 7.5E-19 85.6 8.0 92 12-107 12-105 (114)
121 2fcf_A Multiple PDZ domain pro 99.5 2E-13 6.7E-18 79.9 11.5 85 22-107 15-101 (103)
122 3gsl_A Disks large homolog 4; 99.5 7.5E-14 2.6E-18 89.7 10.6 87 16-107 104-192 (196)
123 1qau_A Neuronal nitric oxide s 99.5 5.6E-14 1.9E-18 83.5 9.0 74 22-106 12-88 (112)
124 1v5q_A GRIP1 homolog, glutamat 99.5 7.5E-14 2.6E-18 84.3 9.6 88 13-106 16-108 (122)
125 2kjd_A Sodium/hydrogen exchang 99.5 3.6E-14 1.2E-18 86.1 8.2 77 18-105 15-93 (128)
126 2ejy_A 55 kDa erythrocyte memb 99.5 6.4E-14 2.2E-18 81.6 8.9 86 6-104 8-95 (97)
127 1uit_A Human discs large 5 pro 99.5 6.4E-14 2.2E-18 83.9 8.8 75 21-107 28-103 (117)
128 3r0h_A INAD, inactivation-NO-a 99.5 9.2E-14 3.2E-18 90.2 10.1 80 19-106 25-109 (206)
129 2iwq_A Multiple PDZ domain pro 99.5 2.5E-13 8.6E-18 82.2 11.3 93 12-106 26-120 (123)
130 2gzv_A PRKCA-binding protein; 99.5 9.5E-14 3.3E-18 83.0 9.2 82 12-104 26-109 (114)
131 1x5n_A Harmonin; PDZ domain, u 99.5 9.6E-14 3.3E-18 82.7 9.0 84 12-106 17-101 (114)
132 1um7_A Synapse-associated prot 99.5 1.8E-14 6.2E-19 85.6 5.7 82 11-105 16-99 (113)
133 1z87_A Alpha-1-syntrophin; pro 99.5 2.8E-14 9.4E-19 96.4 6.9 75 22-106 88-164 (263)
134 1v5l_A PDZ and LIM domain 3; a 99.5 7E-15 2.4E-19 86.4 3.4 75 22-106 14-89 (103)
135 3kzd_A TIAM-1, T-lymphoma inva 99.5 4E-13 1.4E-17 77.8 10.5 82 11-102 7-89 (94)
136 2d8i_A T-cell lymphoma invasio 99.5 7.7E-14 2.6E-18 83.5 7.8 86 10-105 15-101 (114)
137 3tsv_A Tight junction protein 99.5 1.9E-13 6.5E-18 82.8 9.4 73 22-106 38-113 (124)
138 3e17_A Tight junction protein 99.5 2.5E-13 8.4E-18 77.6 9.4 73 17-105 7-81 (88)
139 1v6b_A Harmonin isoform A1; st 99.5 1.4E-13 5E-18 82.6 8.8 73 23-104 28-106 (118)
140 2yt7_A Amyloid beta A4 precurs 99.5 3.2E-13 1.1E-17 79.0 10.0 86 10-104 9-98 (101)
141 2edz_A PDZ domain-containing p 99.5 5.2E-14 1.8E-18 84.0 5.9 74 22-106 24-98 (114)
142 1y7n_A Amyloid beta A4 precurs 99.5 5.7E-13 2E-17 76.5 10.1 79 9-104 10-89 (90)
143 1wh1_A KIAA1095 protein; PDZ d 99.5 4.4E-13 1.5E-17 81.1 9.9 87 11-107 20-109 (124)
144 2qt5_A Glutamate receptor-inte 99.5 6.8E-13 2.3E-17 85.9 11.3 76 20-105 16-93 (200)
145 2xkx_A Disks large homolog 4; 99.5 3.1E-13 1.1E-17 101.9 10.9 92 10-106 57-150 (721)
146 1b8q_A Protein (neuronal nitri 99.5 1.1E-13 3.8E-18 83.9 6.7 85 11-107 9-96 (127)
147 2e7k_A Maguk P55 subfamily mem 99.5 6E-13 2E-17 76.5 9.4 70 21-104 16-87 (91)
148 2yuy_A RHO GTPase activating p 99.5 2E-14 6.8E-19 87.3 3.2 61 46-106 60-121 (126)
149 2edv_A FERM and PDZ domain-con 99.5 4.8E-14 1.6E-18 81.8 4.2 79 12-105 10-89 (96)
150 1p1d_A PDZ45, glutamate recept 99.5 1.1E-12 3.7E-17 84.8 10.9 90 10-106 6-99 (196)
151 2eaq_A LIM domain only protein 99.4 9.8E-13 3.4E-17 75.1 9.2 71 22-105 16-89 (90)
152 1wif_A RSGI RUH-020, riken cDN 99.4 1E-13 3.4E-18 84.3 5.2 78 14-104 29-110 (126)
153 3cyy_A Tight junction protein 99.4 2.5E-12 8.4E-17 73.6 10.7 60 48-107 24-85 (92)
154 2qt5_A Glutamate receptor-inte 99.4 1.7E-12 5.8E-17 84.0 10.2 90 12-107 106-197 (200)
155 2rcz_A Tight junction protein 99.4 7.2E-12 2.4E-16 69.9 10.4 58 48-105 22-81 (81)
156 2z17_A Pleckstrin homology SEC 99.4 1.5E-12 5.2E-17 76.3 7.7 77 22-101 26-103 (104)
157 2lob_A Golgi-associated PDZ an 99.1 3.1E-14 1E-18 85.0 0.0 72 21-102 37-110 (112)
158 1vae_A Rhophilin 2, rhophilin, 99.4 4.6E-13 1.6E-17 79.7 4.5 71 20-104 23-95 (111)
159 3r0h_A INAD, inactivation-NO-a 99.4 5.6E-12 1.9E-16 81.8 9.7 70 23-105 125-196 (206)
160 3tsz_A Tight junction protein 99.4 6.2E-12 2.1E-16 89.1 10.3 71 24-106 20-93 (391)
161 2krg_A Na(+)/H(+) exchange reg 99.4 2.8E-13 9.5E-18 89.2 3.0 78 17-105 14-93 (216)
162 3shw_A Tight junction protein 99.3 6E-12 2.1E-16 90.8 9.5 72 23-106 11-85 (468)
163 3qik_A Phosphatidylinositol 3, 99.3 1.1E-11 3.8E-16 72.3 8.4 69 22-103 27-99 (101)
164 2yub_A LIMK-2, LIM domain kina 99.3 6.3E-12 2.2E-16 75.5 7.0 63 46-108 43-108 (118)
165 1w9e_A Syntenin 1; cell adhesi 99.3 3.5E-11 1.2E-15 75.8 9.8 80 11-104 5-86 (166)
166 2xkx_A Disks large homolog 4; 99.2 4.7E-11 1.6E-15 90.1 9.9 75 20-105 315-391 (721)
167 1p1d_A PDZ45, glutamate recept 99.2 1.7E-10 5.9E-15 74.4 10.8 76 22-105 118-195 (196)
168 3suz_A Amyloid beta A4 precurs 99.2 3.4E-11 1.2E-15 85.2 6.2 87 11-106 205-295 (388)
169 2pzd_A Serine protease HTRA2; 99.2 2.5E-10 8.5E-15 67.7 8.3 60 46-107 34-93 (113)
170 3i18_A LMO2051 protein; alpha- 99.1 4.1E-10 1.4E-14 65.5 8.0 60 46-108 6-68 (100)
171 2p3w_A Probable serine proteas 99.1 4.8E-10 1.7E-14 66.3 8.3 60 46-107 34-93 (112)
172 2l97_A HTRA, putative serine p 99.1 6.1E-10 2.1E-14 68.1 8.5 60 46-108 56-118 (134)
173 2kjp_A Uncharacterized protein 99.1 3.6E-11 1.2E-15 69.1 2.7 58 48-108 2-62 (91)
174 1fc6_A Photosystem II D1 prote 99.1 1.7E-09 5.8E-14 76.4 11.6 77 19-106 81-160 (388)
175 2i6v_A General secretion pathw 99.1 3.2E-10 1.1E-14 64.4 6.1 60 47-108 19-81 (87)
176 2kl1_A YLBL protein; structure 99.1 2.8E-10 9.6E-15 65.6 5.4 60 46-108 4-66 (94)
177 2zpm_A Regulator of sigma E pr 99.0 5.3E-10 1.8E-14 63.7 5.6 57 49-107 6-64 (91)
178 3rle_A Golgi reassembly-stacki 99.0 6.7E-10 2.3E-14 72.5 6.6 60 46-105 15-76 (209)
179 2i4s_A General secretion pathw 99.0 2.4E-09 8.2E-14 62.8 7.6 62 47-108 37-99 (105)
180 3id1_A Regulator of sigma E pr 99.0 3.1E-09 1.1E-13 61.3 7.7 54 50-105 5-61 (95)
181 3pv2_A DEGQ; trypsin fold, PDZ 99.0 2E-09 6.7E-14 77.5 8.2 60 47-108 282-344 (451)
182 4fgm_A Aminopeptidase N family 99.0 3.6E-09 1.2E-13 78.5 9.7 73 23-108 485-557 (597)
183 1y8t_A Hypothetical protein RV 99.0 4.5E-09 1.5E-13 72.5 9.4 72 23-107 229-304 (324)
184 1te0_A Protease DEGS; two doma 99.0 5.3E-09 1.8E-13 72.1 9.7 83 23-108 221-306 (318)
185 3stj_A Protease DEGQ; serine p 98.9 4.1E-09 1.4E-13 73.5 8.5 61 46-108 262-325 (345)
186 1lcy_A HTRA2 serine protease; 98.9 6.3E-09 2.2E-13 71.9 9.3 61 46-108 255-315 (325)
187 4a8c_A Periplasmic PH-dependen 98.9 1.3E-08 4.3E-13 73.0 8.9 61 46-108 262-325 (436)
188 4a8c_A Periplasmic PH-dependen 98.8 1.7E-08 5.7E-13 72.4 8.8 60 46-107 362-422 (436)
189 3k50_A Putative S41 protease; 98.8 1.3E-08 4.5E-13 72.4 7.2 74 22-106 73-147 (403)
190 3pv2_A DEGQ; trypsin fold, PDZ 98.8 2.3E-08 8E-13 72.0 8.6 60 46-107 385-445 (451)
191 2hga_A Conserved protein MTH13 98.8 2.7E-08 9.2E-13 60.1 7.5 57 46-106 24-83 (125)
192 3qo6_A Protease DO-like 1, chl 98.8 1.4E-08 4.9E-13 70.7 6.5 61 46-108 250-324 (348)
193 3rle_A Golgi reassembly-stacki 98.7 2.3E-08 7.9E-13 65.2 5.8 74 23-105 95-170 (209)
194 3suz_A Amyloid beta A4 precurs 98.6 3.6E-09 1.2E-13 74.9 -0.1 54 50-103 318-372 (388)
195 3num_A Serine protease HTRA1; 98.6 4.9E-09 1.7E-13 72.6 0.0 61 46-108 253-313 (332)
196 4fln_A Protease DO-like 2, chl 98.5 2.6E-07 8.9E-12 67.8 7.0 62 46-108 276-348 (539)
197 1ky9_A Protease DO, DEGP, HTRA 98.5 1.4E-08 4.9E-13 73.0 0.0 60 46-107 382-442 (448)
198 1w9e_A Syntenin 1; cell adhesi 98.5 6.5E-07 2.2E-11 56.1 7.3 53 50-102 110-163 (166)
199 1ky9_A Protease DO, DEGP, HTRA 98.4 7E-08 2.4E-12 69.4 2.4 60 46-107 285-347 (448)
200 1k32_A Tricorn protease; prote 98.2 5.3E-06 1.8E-10 64.4 8.8 69 21-105 735-815 (1045)
201 4fln_A Protease DO-like 2, chl 97.7 0.00015 5E-09 53.4 8.0 55 45-101 413-469 (539)
202 3dor_A Protein CT_858, CPAF; m 68.5 8.7 0.0003 28.7 4.8 29 49-81 98-126 (583)
203 3pjy_A Hypothetical signal pep 39.0 42 0.0014 19.9 3.7 24 48-72 102-125 (136)
204 2j3t_D Trafficking protein par 28.3 41 0.0014 21.8 2.5 22 61-82 53-74 (219)
205 1a62_A RHO; transcription term 25.2 72 0.0025 18.7 3.0 40 23-73 60-99 (130)
206 1yfb_A Transition state regula 22.6 41 0.0014 16.9 1.4 19 54-72 25-43 (59)
207 3jxo_A TRKA-N domain protein; 21.7 96 0.0033 16.0 3.1 27 48-74 40-70 (86)
208 3m7a_A Uncharacterized protein 20.3 47 0.0016 19.9 1.5 22 50-72 118-139 (140)
No 1
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.75 E-value=2e-17 Score=97.04 Aligned_cols=92 Identities=32% Similarity=0.480 Sum_probs=76.2
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
++...+.+.+...+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.+.++.++..
T Consensus 3 ~~~~~v~l~k~~~glG~~i~~g~~~-----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 77 (102)
T 2i1n_A 3 FKYEEIVLERGNSGLGFSIAGGIDN-----PHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVE 77 (102)
T ss_dssp EEEEEEEEECBTTBTSEEEEECTTS-----CSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred ceEEEEEEEECCCcCCEEEEcccCC-----CCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3445555556678999999998763 233346789999999999999999 9999999999999999988898888
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|.+.|++..
T Consensus 78 ~~~~~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 78 ALKEAGPVVRLVVRRRQPP 96 (102)
T ss_dssp HHHHSCSEEEEEEEEECCC
T ss_pred HHHcCCCeEEEEEEeCCCC
Confidence 888776 899999997754
No 2
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.74 E-value=3.6e-17 Score=94.53 Aligned_cols=86 Identities=31% Similarity=0.477 Sum_probs=71.7
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
.+++.+...+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.++...++.
T Consensus 6 ~v~l~k~~~g~G~~i~gg~~~-----~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (94)
T 2fe5_A 6 EVNLLKGPKGLGFSIAGGIGN-----QHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN 80 (94)
T ss_dssp EEEEECCTTCSCEEEEECBTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT
T ss_pred EEEEEECCCCCCEEEEcccCC-----CCCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 334444567999999998763 223346789999999999999999 99999999999999999988998888887
Q ss_pred CC-eEEEEEEeCC
Q psy795 94 HP-VLNLLVARKG 105 (109)
Q Consensus 94 ~~-~v~l~v~r~~ 105 (109)
.. .+.|++.|++
T Consensus 81 ~~~~v~l~v~R~g 93 (94)
T 2fe5_A 81 TSDMVYLKVAKPG 93 (94)
T ss_dssp CCSEEEEEEECCC
T ss_pred CCCeEEEEEEcCC
Confidence 77 8999998875
No 3
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.74 E-value=1.6e-16 Score=94.41 Aligned_cols=97 Identities=29% Similarity=0.450 Sum_probs=78.2
Q ss_pred CceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHH
Q psy795 9 TAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 9 ~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
...+.+.+...+...+|||++.++.+. .+......|++|..|.++|||+++||++||+|++||+.++.+.++.+..
T Consensus 12 ~~~~~~~~~l~~~~~glG~~i~~g~~~----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~ 87 (110)
T 1x5q_A 12 IEEEELTLTILRQTGGLGISIAGGKGS----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAV 87 (110)
T ss_dssp CCCEEEEEEEECSSSSCSEEEEECTTS----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCcceEEEEEecCCCeeeEEEEccccC----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 334555666666678999999988763 1222346789999999999999999999999999999999998888887
Q ss_pred HHhcCCC-eEEEEEEeCCEecC
Q psy795 89 DYIKKHP-VLNLLVARKGVTST 109 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~~~~ 109 (109)
..++..+ .+.|.+.|+++..+
T Consensus 88 ~~~~~~g~~v~l~v~R~g~~~~ 109 (110)
T 1x5q_A 88 EALRGAGTAVQMRVWRESGPSS 109 (110)
T ss_dssp HHHHSCCSEEEEEEEECSSCCC
T ss_pred HHhhCCCCeEEEEEEECCccCC
Confidence 7777656 99999999886543
No 4
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.73 E-value=1.2e-16 Score=94.65 Aligned_cols=101 Identities=21% Similarity=0.311 Sum_probs=77.9
Q ss_pred cccCCCCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEecc
Q psy795 3 FQHQAGTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTM 81 (109)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~ 81 (109)
|..........+.+.+.++..+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.+
T Consensus 5 ~~~~~~~~~~~v~l~r~~~~~~lG~~~~~~~~~-----~~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~ 79 (108)
T 2jre_A 5 YSDASGFSLYSVELFREKDTSSLGISISGMRDQ-----STTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQG 79 (108)
T ss_dssp CCSSSSCEEEEEEEECCSTTSCCSEEEECCCCC-----SCSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTT
T ss_pred cccccCcEEEEEEEEecCCCCCcCEEEEcccCC-----CCCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCC
Confidence 344333333334443367788999999987652 112235689999999999999999 99999999999999999
Q ss_pred ccHHHHHHHhcCCC-eEEEEEEeCCEec
Q psy795 82 VTHKKAVDYIKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 82 ~~~~~~~~~l~~~~-~v~l~v~r~~~~~ 108 (109)
+++.++...++..+ .+.|++.|++...
T Consensus 80 ~~~~~~~~~l~~~g~~v~l~v~R~~~~~ 107 (108)
T 2jre_A 80 MAQSDVVEVLRNAGNPVRLLLIRRLPLL 107 (108)
T ss_dssp SCHHHHHHHHHHHCSEEEEEEEECCCCC
T ss_pred CCHHHHHHHHHcCCCeEEEEEEeCCcCC
Confidence 88888888887655 8999999987654
No 5
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.73 E-value=6.4e-17 Score=95.69 Aligned_cols=84 Identities=36% Similarity=0.522 Sum_probs=70.9
Q ss_pred CCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-
Q psy795 18 DGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP- 95 (109)
Q Consensus 18 ~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~- 95 (109)
......+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..+
T Consensus 8 ~~~~~~~~Gf~i~gG~~~-----~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 82 (106)
T 4amh_A 8 VPRGSKGLGFSIAGGVGN-----QHWPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNTSD 82 (106)
T ss_dssp ----CCCSCEEEEECTTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSCCS
T ss_pred CCCCCCccCEEEEeccCC-----ccccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCCCC
Confidence 344567999999999874 233346789999999999999999 9999999999999999999999999998887
Q ss_pred eEEEEEEeCCE
Q psy795 96 VLNLLVARKGV 106 (109)
Q Consensus 96 ~v~l~v~r~~~ 106 (109)
.+.|++.|.+.
T Consensus 83 ~v~l~v~R~~~ 93 (106)
T 4amh_A 83 FVYLKVAKPGS 93 (106)
T ss_dssp EEEEEEECCSS
T ss_pred eEEEEEEeCCC
Confidence 99999999763
No 6
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.73 E-value=8.7e-17 Score=93.39 Aligned_cols=93 Identities=31% Similarity=0.482 Sum_probs=74.7
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+.+.+...+.+.+|||++.++.+. .+......|++|..|.++|||+++||++||.|++||+.++.++++.+....+
T Consensus 3 ~~~~v~~~~~~~glG~~i~~g~~~----~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~ 78 (97)
T 2w4f_A 3 EELTLTILRQTGGLGISIAGGKGS----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEAL 78 (97)
T ss_dssp CEEEEEEECBTTBSSEEEEECTTS----CCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred eEEEEEEEeCCCceeEEEECCccC----CcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 344555556678999999987763 1222246789999999999999999999999999999999998887777777
Q ss_pred cCCC-eEEEEEEeCCEec
Q psy795 92 KKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 92 ~~~~-~v~l~v~r~~~~~ 108 (109)
+..+ .+.|.+.|+++.+
T Consensus 79 ~~~g~~v~l~v~R~g~~~ 96 (97)
T 2w4f_A 79 RGAGTAVQMRVWRERETS 96 (97)
T ss_dssp HTSCSEEEEEEECCSSCC
T ss_pred hCCCCeEEEEEEeCCccc
Confidence 6656 9999999988654
No 7
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.73 E-value=7.8e-17 Score=95.02 Aligned_cols=88 Identities=32% Similarity=0.431 Sum_probs=72.5
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
.+.+.+...+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.+.++.++...++.
T Consensus 6 ~v~l~k~~~glG~~i~gg~~~-----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (105)
T 2awx_A 6 EIKLIKGPKGLGFSIAGGVGN-----QHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN 80 (105)
T ss_dssp EEEEECBTTBSSEEEEECBTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS
T ss_pred EEEEEECCCCCCEEEeCccCC-----CCCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 334445557999999998763 222345689999999999999999 99999999999999999899999888887
Q ss_pred CC-eEEEEEEeCCEe
Q psy795 94 HP-VLNLLVARKGVT 107 (109)
Q Consensus 94 ~~-~v~l~v~r~~~~ 107 (109)
.+ .+.|.+.|.+..
T Consensus 81 ~~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 81 TSDFVYLKVAKPTSM 95 (105)
T ss_dssp CCSEEEEEEECCCC-
T ss_pred CCCeEEEEEEcCCCC
Confidence 77 899999997753
No 8
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.72 E-value=1.7e-16 Score=92.93 Aligned_cols=90 Identities=33% Similarity=0.474 Sum_probs=73.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+. +...+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 8 ~~~v~l~--~~~~~lG~~l~~g~~~-----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 80 (101)
T 2jik_A 8 EEEINLT--RGPSGLGFNIVGGTDQ-----QYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVD 80 (101)
T ss_dssp EEEEEEE--CCTTCCCEEEEECTTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred cEEEEEE--eCCCCCCEEEeccccC-----CCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444444 4458999999998773 222235689999999999999999 9999999999999999999999888
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|++.|.+..
T Consensus 81 ~~~~~g~~v~l~v~R~~~~ 99 (101)
T 2jik_A 81 LFRNAGYAVSLRVQHRLES 99 (101)
T ss_dssp HHHTCCSEEEEEEEEESCC
T ss_pred HHHhCCCeEEEEEEeCCCC
Confidence 888766 899999987754
No 9
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=1.1e-16 Score=96.24 Aligned_cols=89 Identities=33% Similarity=0.495 Sum_probs=73.5
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+. ++..+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 25 ~~~v~l~--k~~~glG~~i~gg~~~-----~~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 97 (117)
T 2byg_A 25 VVEIKLF--KGPKGLGFSIAGGVGN-----QHIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVA 97 (117)
T ss_dssp EEEEEEE--CBTTBSSEEEEECTTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred eEEEEEE--eCCCCcCEEEEcccCC-----CCccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444443 4458999999988763 222345789999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.++..+ .+.|+|.|.+.
T Consensus 98 ~l~~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 98 ILKNTSEVVYLKVGKPTT 115 (117)
T ss_dssp HHHTCCSEEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEEeCCc
Confidence 998777 99999998764
No 10
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=3.1e-17 Score=96.51 Aligned_cols=90 Identities=24% Similarity=0.331 Sum_probs=76.9
Q ss_pred CCCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHH
Q psy795 7 AGTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHK 85 (109)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~ 85 (109)
+..+.+...+.+.+...+|||.+.++.+. ..+++|..|.+++||+++| |++||+|++||+.++.++++.
T Consensus 4 ~~~~~~~~~v~l~~~~~g~G~~i~~g~~~----------~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~ 73 (103)
T 1uep_A 4 GSSGYKELDVHLRRMESGFGFRILGGDEP----------GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHR 73 (103)
T ss_dssp CSSSEEEECCEEESSSSSCCEEECCCCST----------TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHH
T ss_pred CCCCceEEEEEEEeCCCccCEEEeeecCC----------CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH
Confidence 44566777777777888999999987653 4678999999999999999 999999999999999988899
Q ss_pred HHHHHhcCC--C-eEEEEEEeCCE
Q psy795 86 KAVDYIKKH--P-VLNLLVARKGV 106 (109)
Q Consensus 86 ~~~~~l~~~--~-~v~l~v~r~~~ 106 (109)
++...++.. . .+.|++.|.+.
T Consensus 74 ~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 74 YVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHhCCCCCcEEEEEEeCCC
Confidence 998888775 4 89999998764
No 11
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.72 E-value=7.3e-17 Score=92.47 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=71.7
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
++.+.++... ..+|||++.++.+. ..|++|..|.++|||+++||++||+|++||+.++.++++.++...
T Consensus 2 ~~~~~v~~~~-~~~~G~~l~gg~~~----------~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 70 (89)
T 2q3g_A 2 MDSFKVVLEG-PAPWGFRLQGGKDF----------NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNK 70 (89)
T ss_dssp EEEEEEEEES-SSCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHH
T ss_pred ccEEEEEEcC-CCcccEEEECcCCC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3455555544 47999999987763 457999999999999999999999999999999999888998888
Q ss_pred hcCCC-eEEEEEEeCCE
Q psy795 91 IKKHP-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~ 106 (109)
++..+ .+.+++.|++.
T Consensus 71 ~~~~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 71 IRACGERLSLGLSRAIT 87 (89)
T ss_dssp HHTCTTEEEEEEEEECC
T ss_pred HHhCCCEEEEEEEeCCC
Confidence 88767 88999998764
No 12
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.72 E-value=7.3e-17 Score=92.24 Aligned_cols=83 Identities=24% Similarity=0.332 Sum_probs=70.0
Q ss_pred EeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhc
Q psy795 13 CLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIK 92 (109)
Q Consensus 13 ~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~ 92 (109)
.+.+++ ++..+|||++.++.+. ..+++|..|.++|||+++||++||+|++||+.++.++++.++...++
T Consensus 4 ~~~v~l-~~~~~~G~~l~~g~~~----------~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 72 (88)
T 2uzc_A 4 NYSVSL-VGPAPWGFRLQGGKDF----------NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIK 72 (88)
T ss_dssp EEEEEE-ESSSCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEE-cCCCcccEEEECcCCC----------CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 344444 3457899999988764 45799999999999999999999999999999999998888888887
Q ss_pred CCC-eEEEEEEeCCE
Q psy795 93 KHP-VLNLLVARKGV 106 (109)
Q Consensus 93 ~~~-~v~l~v~r~~~ 106 (109)
..+ .+.+++.|++.
T Consensus 73 ~~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 73 GCTGSLNMTLQRESD 87 (88)
T ss_dssp TCCSEEEEEEECCCC
T ss_pred hCCCeEEEEEEeCCC
Confidence 666 89999998763
No 13
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.72 E-value=2.4e-16 Score=93.22 Aligned_cols=96 Identities=31% Similarity=0.497 Sum_probs=77.0
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
+.+...+.+.+...+|||++.++.+.. ..+......|++|..|.+++||+++ ||++||+|++||+.++.++++.+++
T Consensus 6 ~~~~~~v~l~k~~~~lG~~i~g~~~~~--~~~~~~~~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~ 83 (107)
T 1uhp_A 6 SGKSLTLVLHRDSGSLGFNIIGGRPSV--DNHDGSSSEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAV 83 (107)
T ss_dssp SSEEEEEEECCSSSCCSEEEECCCSCC--CCTTSSCSCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHH
T ss_pred CcEEEEEEEEeCCCccCEEEEcCCCCc--ccccccCCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 445555666666789999999877521 1223334678999999999999999 7999999999999999999999999
Q ss_pred HHhcCCC-eEEEEEEeCCEe
Q psy795 89 DYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~~ 107 (109)
..++... .+.|++.|++..
T Consensus 84 ~~~~~~~~~v~l~v~R~~~~ 103 (107)
T 1uhp_A 84 EAFKTAKEPIVVQVLRRTSG 103 (107)
T ss_dssp HHHHHCCSSEEEEEEECCSS
T ss_pred HHHHcCCCcEEEEEEeCCCC
Confidence 9888766 889999887643
No 14
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.71 E-value=2.1e-16 Score=91.50 Aligned_cols=84 Identities=24% Similarity=0.371 Sum_probs=70.0
Q ss_pred EeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 13 CLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 13 ~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
++.+.......+|||++.+..+ ..|++|..|.++|||+++| |++||+|++||+.++.+.++.++...+
T Consensus 6 ~v~l~k~~~~~~lG~~~~~~~~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~ 74 (95)
T 2vwr_A 6 QVALHKRDSGEQLGIKLVRRTD-----------EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQII 74 (95)
T ss_dssp EEEEECSSTTCCCCEEEEECSS-----------SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEECCCCCcccEEEEeccC-----------CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3344433345789999988766 4689999999999999999 999999999999999998888888888
Q ss_pred cCCC-eEEEEEEeCCEe
Q psy795 92 KKHP-VLNLLVARKGVT 107 (109)
Q Consensus 92 ~~~~-~v~l~v~r~~~~ 107 (109)
+..+ .+.|.+.|.+..
T Consensus 75 ~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 75 QASGERVNLTIARPGKP 91 (95)
T ss_dssp HHCCSEEEEEEEEESCS
T ss_pred HcCCCEEEEEEEcCCcC
Confidence 7666 899999997643
No 15
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.71 E-value=8.5e-17 Score=91.34 Aligned_cols=74 Identities=24% Similarity=0.343 Sum_probs=65.8
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||++.++.+. ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++... .+.++
T Consensus 10 ~~~~G~~l~gg~~~----------~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~ 79 (85)
T 1rgw_A 10 PGPWGFRLQGGKDF----------NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSASYNLSLT 79 (85)
T ss_dssp SSCCCEEECCCGGG----------TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCSSCEEEE
T ss_pred CCccCEEEEeccCC----------CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCCCeEEEE
Confidence 46899999988764 45789999999999999999999999999999999999899888888766 88999
Q ss_pred EEeCC
Q psy795 101 VARKG 105 (109)
Q Consensus 101 v~r~~ 105 (109)
+.|++
T Consensus 80 v~R~~ 84 (85)
T 1rgw_A 80 LQKSK 84 (85)
T ss_dssp EESCC
T ss_pred EEeCC
Confidence 98875
No 16
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=1.7e-16 Score=93.56 Aligned_cols=91 Identities=29% Similarity=0.464 Sum_probs=76.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+++.+...+|||++.++.+. .+......|++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 6 ~~~~~v~l~~~~~glG~~l~~g~~~----~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 81 (105)
T 1wha_A 6 SGRHVACLARSERGLGFSIAGGKGS----TPYRAGDAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVS 81 (105)
T ss_dssp CEEEEEEECCCTTCCSCEEECCTTS----CCSSTTCCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred CeeEEEEEEeCCCccCEEEEeccCC----CcccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4555666666778999999998763 1222346789999999999999999 9999999999999999988999999
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++... .+.|++.|+.
T Consensus 82 ~l~~~g~~v~l~v~R~~ 98 (105)
T 1wha_A 82 LLTAASPTIALLLEREA 98 (105)
T ss_dssp HHTSCCSCEEEEEEECC
T ss_pred HHHcCCCeEEEEEEECC
Confidence 998777 8999999875
No 17
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.71 E-value=6.2e-17 Score=97.37 Aligned_cols=90 Identities=34% Similarity=0.471 Sum_probs=74.2
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
++..+.+.+...+|||++.++.+. .....|++|..|.++|||+++| |++||+|++||+.++.++++.++...
T Consensus 25 ~~~~v~L~k~~~glGf~l~~g~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 97 (117)
T 2fne_A 25 QCKSITLERGPDGLGFSIVGGYGS-------PHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAI 97 (117)
T ss_dssp EEEEEEECCBTTBTSEEEEEEEEE-------TTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ccEEEEEEeCCCcccEEEecccCC-------CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344455556668999999987652 1124579999999999999999 99999999999999998899999999
Q ss_pred hcCCC-eEEEEEEeCCEec
Q psy795 91 IKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~~ 108 (109)
++..+ .+.|++.|.++.+
T Consensus 98 l~~~~~~v~l~v~R~g~~~ 116 (117)
T 2fne_A 98 LKRTKGTVTLMVLSSDETS 116 (117)
T ss_dssp HHHCCSSEEEEEEECSCEE
T ss_pred HHcCCCeEEEEEEeCCccc
Confidence 88766 8999999987653
No 18
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.71 E-value=6e-16 Score=88.88 Aligned_cols=84 Identities=21% Similarity=0.371 Sum_probs=69.1
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
+..++.+.....+.+|||++.++.. ..|++|..|.++|||+++||++||+|++||+.++.++++.+...
T Consensus 6 ~~~~v~l~k~~~~~~~G~~~~~~~~-----------~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~ 74 (91)
T 1m5z_A 6 ELHKVTLYKDSGMEDFGFSVADGLL-----------EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVP 74 (91)
T ss_dssp EEEEEEEECCTTCSSSSEEEEECTT-----------SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred ceEEEEEEECCCCCCccEEEEeccC-----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444455444445689999988765 46899999999999999999999999999999999988888777
Q ss_pred HhcCCC-eEEEEEEeC
Q psy795 90 YIKKHP-VLNLLVARK 104 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~ 104 (109)
.++..+ .+.+.+.|+
T Consensus 75 ~~~~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 75 LIAESGNKLDLVISRN 90 (91)
T ss_dssp HHHTSTTEEEEEEEEC
T ss_pred HHHcCCCEEEEEEEeC
Confidence 777666 888998875
No 19
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.71 E-value=3.1e-16 Score=91.27 Aligned_cols=85 Identities=31% Similarity=0.463 Sum_probs=71.8
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhc
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIK 92 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~ 92 (109)
..++..+.+.+|||++.++.+.. ..|++|..|.++|||+++| |++||+|++||+.++.++++.++...++
T Consensus 6 ~~v~l~~~~~~lG~~l~~~~~~~---------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~ 76 (98)
T 2opg_A 6 TTIEISKGRTGLGLSIVGGSDTL---------LGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLR 76 (98)
T ss_dssp EEEEEECBTTBTCEEEEECTTST---------TCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHH
T ss_pred EEEEEEECCCcccEEEecCCCCC---------CCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 34555566789999999876630 2589999999999999999 9999999999999999988888888888
Q ss_pred CCC-eEEEEEEeCCEe
Q psy795 93 KHP-VLNLLVARKGVT 107 (109)
Q Consensus 93 ~~~-~v~l~v~r~~~~ 107 (109)
... .+.|++.|++..
T Consensus 77 ~~~~~v~l~v~R~~~~ 92 (98)
T 2opg_A 77 QTPQRVRLTLYRDEAP 92 (98)
T ss_dssp TCCSEEEEEEEECSSC
T ss_pred hCCCeEEEEEEcCCCC
Confidence 776 899999998754
No 20
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.70 E-value=2.1e-16 Score=90.70 Aligned_cols=78 Identities=28% Similarity=0.429 Sum_probs=68.5
Q ss_pred CCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-e
Q psy795 18 DGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-V 96 (109)
Q Consensus 18 ~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~ 96 (109)
+.++..+|||.+.+..+ ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .
T Consensus 10 l~k~~~g~G~~~~~~~~-----------~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2he4_A 10 LRKGPQGYGFNLHSDKS-----------RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAREDE 78 (90)
T ss_dssp EECBTTBCCEEEEECSS-----------SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTSSSE
T ss_pred EEECCCCccEEEEccCC-----------CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 34455799999988766 46799999999999999999999999999999999999999999998877 8
Q ss_pred EEEEEEeCCE
Q psy795 97 LNLLVARKGV 106 (109)
Q Consensus 97 v~l~v~r~~~ 106 (109)
+.|.+.|.+.
T Consensus 79 v~l~v~r~~~ 88 (90)
T 2he4_A 79 ARLLVVGPST 88 (90)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEccCC
Confidence 9999998764
No 21
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.70 E-value=2.1e-16 Score=94.25 Aligned_cols=83 Identities=28% Similarity=0.498 Sum_probs=70.4
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
.+...+...+|||++.++.+. ..|++|..|.++|||+++| |++||+|++||+.++.++++.++...++.
T Consensus 27 ~v~l~~~~~glG~~l~~~~~~----------~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~ 96 (112)
T 2r4h_A 27 TVELERGAKGFGFSLRGGREY----------NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN 96 (112)
T ss_dssp EEEEECBTTBTSEEEEECGGG----------TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEcCCCccCEEEeccccC----------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344445557899999987653 4689999999999999999 99999999999999999888998888887
Q ss_pred CC-eEEEEEEeCCEe
Q psy795 94 HP-VLNLLVARKGVT 107 (109)
Q Consensus 94 ~~-~v~l~v~r~~~~ 107 (109)
.+ .+.|++.|++..
T Consensus 97 ~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 97 GGRRVRLFLKRGETS 111 (112)
T ss_dssp TTTEEEEEEECCEEE
T ss_pred CCCeEEEEEEeCCcc
Confidence 66 899999987653
No 22
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.70 E-value=2.6e-16 Score=89.81 Aligned_cols=82 Identities=30% Similarity=0.362 Sum_probs=70.4
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
+.+... +..+|||++.++.+. ..|++|..|.++|||+++||++||.|++||+.++.++++.++...++.
T Consensus 4 ~~v~~~-~~~~lG~~l~~~~~~----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (87)
T 2pa1_A 4 LTVDVA-GPAPWGFRITGGRDF----------HTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQ 72 (87)
T ss_dssp EEEEEC-SSSCCSEEEEEEGGG----------TEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHT
T ss_pred EEEEEC-CCCccCEEEecccCC----------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344443 357999999988763 467999999999999999999999999999999999888999999988
Q ss_pred CC-eEEEEEEeCCE
Q psy795 94 HP-VLNLLVARKGV 106 (109)
Q Consensus 94 ~~-~v~l~v~r~~~ 106 (109)
.. .+.+.+.|++.
T Consensus 73 ~~~~v~l~v~R~~~ 86 (87)
T 2pa1_A 73 SPSPLRLQLDRITS 86 (87)
T ss_dssp CCSSEEEEEEECCC
T ss_pred CCCeEEEEEEecCC
Confidence 87 89999999864
No 23
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.70 E-value=1.9e-16 Score=92.04 Aligned_cols=91 Identities=22% Similarity=0.337 Sum_probs=73.8
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+.+.+.+.++..+|||++.++.+.. .....|++|..|.++|||+++| |++||+|++||+.++.++++.++...
T Consensus 3 ~~~~v~l~k~~~~lG~~i~~~~~~~------~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 76 (97)
T 2jil_A 3 RTVEVTLHKEGNTFGFVIRGGAHDD------RNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSI 76 (97)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCSC------C--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred eEEEEEEEeCCCccCEEEeCcccCC------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3445555666789999999876521 1225689999999999999999 99999999999999999888998888
Q ss_pred hcCCC-eEEEEEEeCCEec
Q psy795 91 IKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~~ 108 (109)
++..+ .+.|.+.|++...
T Consensus 77 l~~~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 77 LKQCGQEAALLIEYDVSET 95 (97)
T ss_dssp HHHSCSEEEEEEEEECCCC
T ss_pred HHcCCCeEEEEEEeCCCcC
Confidence 88755 8999999977543
No 24
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.70 E-value=2.9e-16 Score=91.29 Aligned_cols=84 Identities=15% Similarity=0.208 Sum_probs=70.0
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
.+.+.+...+|||++.+..+. ..+++|..|.+++||+++| |++||+|++||+.++.++++.++...++.
T Consensus 8 ~v~l~~~~~~lG~~i~~~~~~----------~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 77 (97)
T 1n7e_A 8 TVELKRYGGPLGITISGTEEP----------FDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQM 77 (97)
T ss_dssp EEEEECTTSCCCEEEECCSST----------TSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEeCCCCcCEEEEcccCC----------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc
Confidence 344445556799999887642 3679999999999999999 99999999999999998888998888886
Q ss_pred CC-eEEEEEEeCCEec
Q psy795 94 HP-VLNLLVARKGVTS 108 (109)
Q Consensus 94 ~~-~v~l~v~r~~~~~ 108 (109)
.+ .+.|++.|.+...
T Consensus 78 ~g~~v~l~v~R~~~~~ 93 (97)
T 1n7e_A 78 AGETVTLKIKKQTDAQ 93 (97)
T ss_dssp CCSEEEEEEECCCCCC
T ss_pred CCCeEEEEEEeCCCCC
Confidence 55 8999999987543
No 25
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.70 E-value=6.3e-16 Score=92.84 Aligned_cols=80 Identities=21% Similarity=0.291 Sum_probs=69.4
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
.+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.++...++... .+.|+
T Consensus 30 ~glG~~i~g~~~~-----~~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 104 (117)
T 1ujd_A 30 NGLGIRIVGGKEI-----PGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQSGEAEIC 104 (117)
T ss_dssp CSCSEEEEEEEEC-----SSSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCSSCEEEE
T ss_pred CcccEEEeCCCCC-----CcccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 7999999998763 222234589999999999999999 9999999999999999999999999998877 99999
Q ss_pred EEeCCEe
Q psy795 101 VARKGVT 107 (109)
Q Consensus 101 v~r~~~~ 107 (109)
|.|++..
T Consensus 105 v~R~~~~ 111 (117)
T 1ujd_A 105 VRLDLNM 111 (117)
T ss_dssp EESSCCC
T ss_pred EEECCcc
Confidence 9998754
No 26
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=6.9e-16 Score=93.41 Aligned_cols=86 Identities=26% Similarity=0.290 Sum_probs=72.7
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+.+.+...+|||++.++.+. ..|++|..|.+++||+++| |++||+|++||+.++.++++.++..
T Consensus 18 ~~~~~v~l~~~~~glG~~~~~g~~~----------~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 87 (123)
T 1ueq_A 18 GTFLSTTLKKSNMGFGFTIIGGDEP----------DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVK 87 (123)
T ss_dssp SEEEEEEEECCTTSCSEEEECCSSS----------SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHH
T ss_pred CcEEEEEEEeCCCceeEEEecccCC----------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4445555556678999999987653 5679999999999999999 9999999999999999989999999
Q ss_pred HhcCC--C-eEEEEEEeCCE
Q psy795 90 YIKKH--P-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~--~-~v~l~v~r~~~ 106 (109)
.++.. + .+.|+|.|.+.
T Consensus 88 ~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 88 LFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp HHHTSCTTCEEEEEEEESCC
T ss_pred HHHhCCCCCeEEEEEEeCCC
Confidence 98873 4 89999998763
No 27
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.69 E-value=2e-16 Score=93.33 Aligned_cols=88 Identities=24% Similarity=0.403 Sum_probs=72.6
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+.+.+++ ++..+|||++.++... .....|++|..|.++|||+++| |++||+|++||+.++.++++.++...
T Consensus 11 ~~~~v~l-~~~~glG~~i~~~~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 82 (106)
T 3axa_A 11 EIITVTL-KKQNGMGLSIVAAKGA-------GQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAEL 82 (106)
T ss_dssp CEEEEEE-ECSSSCSEEEEEEECS-------SCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred eEEEEEE-CCCCccCEEEEeecCC-------CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3444444 5568999999986542 1225689999999999999999 99999999999999999899999988
Q ss_pred hcCCC-eEEEEEEeCCEe
Q psy795 91 IKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~ 107 (109)
++..+ .+.|.+.|++..
T Consensus 83 ~~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 83 MTRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp HHTCCSEEEEEEECCCSS
T ss_pred HHcCCCeEEEEEEeCCcc
Confidence 87777 899999998753
No 28
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=99.69 E-value=7.6e-16 Score=92.75 Aligned_cols=87 Identities=22% Similarity=0.299 Sum_probs=72.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+. .....+|||++.++.+. .....|++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 25 ~~~v~l~-k~~~~~lGf~i~gg~~~-------~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~ 96 (118)
T 3b76_A 25 EKVVNIQ-KDPGESLGMTVAGGASH-------REWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVA 96 (118)
T ss_dssp EEEEEEE-CCTTCCCCEEEEECSCS-------TTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHH
T ss_pred cEEEEEE-eCCCCccCEEEecCCCC-------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444444 33357999999998752 2236789999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++..+ .+.|++.|..
T Consensus 97 ~l~~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 97 LLKRTSSSIVLKALEVK 113 (118)
T ss_dssp HHHSCCSEEEEEEEEEE
T ss_pred HHHcCCCeEEEEEEECC
Confidence 999888 8999988854
No 29
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.69 E-value=2.4e-16 Score=94.00 Aligned_cols=90 Identities=22% Similarity=0.386 Sum_probs=74.4
Q ss_pred eEEeeecCCCCcceecEEEec---ccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGG---GIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g---~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
++.+.+...+...+|||++.+ +.+. .....|++|..|.++|||+++| |++||+|++||+.++.++++.+
T Consensus 3 ~~~~~v~l~k~~~glG~~l~~~~~~~~~-------~~~~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~ 75 (113)
T 2g5m_B 3 MELFPVELEKDSEGLGISIIGMGAGADM-------GLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF 75 (113)
T ss_dssp CEEEEEECCCCSSCCCCEEEEEECCCCS-------SSCCEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH
T ss_pred eEEEEEEEEeCCCCCCEEEEecCCCCcC-------CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 345566666677899999998 3331 2235689999999999999999 9999999999999999988998
Q ss_pred HHHHhcCCC-eEEEEEEeCCEe
Q psy795 87 AVDYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~~ 107 (109)
+...++..+ .+.|.+.|++..
T Consensus 76 ~~~~~~~~g~~v~l~v~R~~~~ 97 (113)
T 2g5m_B 76 AASVLRNTKGRVRFMIGRERPG 97 (113)
T ss_dssp HHHHHHHSCSSCEEEEEECCCC
T ss_pred HHHHHhcCCCeEEEEEEeCCCC
Confidence 888887777 899999998754
No 30
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.69 E-value=5e-16 Score=92.18 Aligned_cols=89 Identities=26% Similarity=0.380 Sum_probs=73.5
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+++.+...+|||++.++.+. .....|++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 7 ~~~~~v~l~~~~~glG~~l~~g~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 79 (110)
T 1um1_A 7 GYVFTVELERGPSGLGMGLIDGMHT-------HLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVD 79 (110)
T ss_dssp CCEEEEEEECCTTCCCEEEEETTTS-------TTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHH
T ss_pred CcEEEEEEEECCCccCEEEeCCcCC-------CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444455445567999999987653 1235689999999999999999 9999999999999999888999988
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.++..+ .+.|.+.|.+.
T Consensus 80 ~~~~~~~~v~l~v~R~~~ 97 (110)
T 1um1_A 80 LIRHGGKKMRFLVAKSDV 97 (110)
T ss_dssp HHHTCCSEEEEEEECCCH
T ss_pred HHHcCCCeEEEEEEeCCc
Confidence 888777 89999999874
No 31
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.69 E-value=9.5e-17 Score=98.14 Aligned_cols=88 Identities=20% Similarity=0.323 Sum_probs=72.7
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+...+.+.+...||||++.++.+. + ....+++|..|.+++||+++ ||++||+|++|||.++.+++|.+++..
T Consensus 29 ~~~~v~l~k~~~glG~~i~gg~~~-----~--~~~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~ 101 (130)
T 1i16_A 29 TVCTVTLEKMSAGLGFSLEGGKGS-----L--HGDKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNI 101 (130)
T ss_dssp EEEEEEEETTSSSTTEEEECCCCC-----S--SSCCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHH
T ss_pred cEEEEEEEcCCCccCEEEecCcCC-----C--CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 334444455568999999988762 1 12567999999999999999 799999999999999999999999999
Q ss_pred hcCCC--eEEEEEEeCCE
Q psy795 91 IKKHP--VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~--~v~l~v~r~~~ 106 (109)
++... .+.|+|+|++.
T Consensus 102 l~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 102 IKALPDGPVTIVIRRKSL 119 (130)
T ss_dssp HHTSCSSEEEEEEEEESS
T ss_pred HHhCCCceEEEEEEeCCC
Confidence 99886 68999988653
No 32
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.69 E-value=7.3e-17 Score=97.45 Aligned_cols=89 Identities=22% Similarity=0.365 Sum_probs=70.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
...+.+.... ..+|||++.++... .....|++|..|.++|||+++ ||++||+|++|||.++.++++.+++.
T Consensus 25 ~~~v~l~k~~-~~~lGf~i~gg~~~-------~~~~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~ 96 (120)
T 2iwo_A 25 LRTVEMKKGP-TDSLGISIAGGVGS-------PLGDVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVN 96 (120)
T ss_dssp CEEEEEEC-----CCCEEEEEEEEE-------TTEEEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHH
T ss_pred cEEEEEEcCC-CCCCCEEEecccCC-------CCCCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444444332 25999999987652 111457999999999999999 79999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|+|.|.+..
T Consensus 97 ~l~~~~~~v~l~v~r~g~~ 115 (120)
T 2iwo_A 97 LLKNASGSIEMQVVAGGDV 115 (120)
T ss_dssp HHHHCCSEEEEEEECCTTS
T ss_pred HHHcCCCeEEEEEEECCcc
Confidence 998888 999999998754
No 33
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.69 E-value=3.4e-16 Score=89.78 Aligned_cols=82 Identities=23% Similarity=0.337 Sum_probs=68.6
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhc
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIK 92 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~ 92 (109)
..+.+.+...+|||++.++.+. ..+++|..|.++|||+++| |++||+|++||+.++.+.++.++...++
T Consensus 4 ~~v~l~~~~~g~G~~~~~g~~~----------~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~ 73 (90)
T 2q9v_A 4 QDIFLWRKETGFGFRILGGNEP----------GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQ 73 (90)
T ss_dssp EEEEEECBTTBCCEEEEECSST----------TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHH
T ss_pred EEEEEEECCCccCEEEEccccC----------CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 3444455667999999987663 4569999999999999999 9999999999999998888898888887
Q ss_pred CCC---eEEEEEEeCC
Q psy795 93 KHP---VLNLLVARKG 105 (109)
Q Consensus 93 ~~~---~v~l~v~r~~ 105 (109)
... .+.|++.|..
T Consensus 74 ~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 74 QAAKQGHVNLTVRQTR 89 (90)
T ss_dssp HHHHHTEEEEEEEECC
T ss_pred hCCCCCeEEEEEEecc
Confidence 653 7899998864
No 34
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.68 E-value=6.4e-16 Score=89.58 Aligned_cols=83 Identities=27% Similarity=0.479 Sum_probs=69.6
Q ss_pred cCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC
Q psy795 17 PDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP 95 (109)
Q Consensus 17 ~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~ 95 (109)
.+.+...+|||++.++... .....|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..+
T Consensus 10 ~l~k~~~~lG~~i~~g~~~-------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g 82 (96)
T 1d5g_A 10 ELAKNDNSLGISVTGGVNT-------SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNTG 82 (96)
T ss_dssp EEECSSSSCCEEEECCSSS-------CSSSSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHSCC
T ss_pred EEEeCCCCCCEEEECCCCC-------CCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 3334457999999987652 1124689999999999999999 9999999999999999999999998888766
Q ss_pred -eEEEEEEeCCE
Q psy795 96 -VLNLLVARKGV 106 (109)
Q Consensus 96 -~v~l~v~r~~~ 106 (109)
.+.|.+.|++.
T Consensus 83 ~~v~l~v~R~~~ 94 (96)
T 1d5g_A 83 QVVHLLLEKGQS 94 (96)
T ss_dssp SEEEEEEECCSC
T ss_pred CeEEEEEEcCCC
Confidence 88999988764
No 35
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.68 E-value=4.8e-16 Score=88.25 Aligned_cols=79 Identities=20% Similarity=0.268 Sum_probs=66.3
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
+++..+.+.||||++.++.+. ..+++|..|.++|||+++| |++||+|++||+.++.++++.++...++.
T Consensus 3 ~v~l~k~~~g~G~~i~~~~~~----------~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~ 72 (85)
T 2i04_A 3 HTKLRKSSRGFGFTVVGGDEP----------DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQS 72 (85)
T ss_dssp EEEEECBTTBSSEEEEECCST----------TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT
T ss_pred EEEEEECCCCCCEEEEcccCC----------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 344455667999999886552 4679999999999999999 99999999999999999888898888877
Q ss_pred C--C-eEEEEEEe
Q psy795 94 H--P-VLNLLVAR 103 (109)
Q Consensus 94 ~--~-~v~l~v~r 103 (109)
. + .+.+++.|
T Consensus 73 ~~~g~~v~l~v~R 85 (85)
T 2i04_A 73 IPIGASVDLELCR 85 (85)
T ss_dssp SCTTCEEEEEEEC
T ss_pred CCCCCeEEEEEEC
Confidence 5 4 78888765
No 36
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=6.7e-16 Score=93.03 Aligned_cols=91 Identities=32% Similarity=0.413 Sum_probs=73.7
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+...+.+.+...+|||++.++.+. +......|++|..|.+++||+++| |++||+|++||+.++.++++.++...
T Consensus 17 ~~~~v~l~r~~~~lG~~i~~~~~~-----~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 91 (120)
T 2eno_A 17 TEEEINLTRGPSGLGFNIVGGTDQ-----QYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 91 (120)
T ss_dssp EEEEEEEECCSSSCSEEEECCTTT-----CSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHH
T ss_pred ceEEEEEEECCCCCCEEEecccCC-----ccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 333444445558999999997763 222346789999999999999999 99999999999999999998898888
Q ss_pred hcCCC-eEEEEEEeCCEe
Q psy795 91 IKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~ 107 (109)
++... .+.|+|.|.+..
T Consensus 92 ~~~~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 92 FRNAGYAVSLRVQHRLQV 109 (120)
T ss_dssp HHHHCSEEEEEEEEEEEC
T ss_pred HHcCCCeEEEEEEeCCcC
Confidence 87666 889999987654
No 37
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.68 E-value=4.9e-16 Score=89.30 Aligned_cols=77 Identities=30% Similarity=0.331 Sum_probs=67.7
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||++.++.+. ..|++|..|.++|||+++||++||.|++||+.++.++++.++...++..+ .+.+.
T Consensus 12 ~~~~G~~l~~~~~~----------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 81 (91)
T 2pkt_A 12 PGPWGFRLVGGKDF----------EQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLT 81 (91)
T ss_dssp SSCCSEEEEEEGGG----------TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEE
T ss_pred CCCCCEEEEccCCC----------CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 36899999987663 45799999999999999999999999999999999998888888888755 99999
Q ss_pred EEeCCEec
Q psy795 101 VARKGVTS 108 (109)
Q Consensus 101 v~r~~~~~ 108 (109)
+.|++...
T Consensus 82 v~R~g~~~ 89 (91)
T 2pkt_A 82 VARSEHES 89 (91)
T ss_dssp EEEECCCC
T ss_pred EEECCccc
Confidence 99987654
No 38
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=99.68 E-value=1.2e-16 Score=97.41 Aligned_cols=97 Identities=22% Similarity=0.374 Sum_probs=78.1
Q ss_pred CCCCceEEeeecCC-CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEecccc
Q psy795 6 QAGTAMECLSPPDG-RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVT 83 (109)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~ 83 (109)
+...+...+.+.+. +...+|||++.++.+. ......|++|..|.+++||+++| |++||+|++||+.++.+++
T Consensus 19 ~~~~~~~~~~v~l~k~~~~glG~~i~~~~~~------~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~ 92 (127)
T 1wg6_A 19 LESSEQLTLEIPLNDSGSAGLGVSLKGNKSR------ETGTDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKS 92 (127)
T ss_dssp CCCCEEEEEEEECSSSTTTCCCCEEEEEEET------TTTEEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSC
T ss_pred CCCCCceEEEEEEeeCCCCccCeEEecccCC------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC
Confidence 33444556667665 6788999999987752 01123579999999999999999 9999999999999999999
Q ss_pred HHHHHHHhcCC-------C-eEEEEEEeCCEec
Q psy795 84 HKKAVDYIKKH-------P-VLNLLVARKGVTS 108 (109)
Q Consensus 84 ~~~~~~~l~~~-------~-~v~l~v~r~~~~~ 108 (109)
+.+++..++.. . .|.|+|.|.+...
T Consensus 93 ~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~~~ 125 (127)
T 1wg6_A 93 NHEAMETLRRSMSMEGNIRGMIQLVILRRSGPS 125 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEEEEEECSCSS
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEEeCCCCC
Confidence 99999998864 4 8999999987553
No 39
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.68 E-value=9.6e-16 Score=91.06 Aligned_cols=92 Identities=21% Similarity=0.279 Sum_probs=75.2
Q ss_pred CceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHH
Q psy795 9 TAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKA 87 (109)
Q Consensus 9 ~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~ 87 (109)
...+.+.+...+.+.+|||++.+.... .....|++|..|.++|||+++| |++||+|++||+.++.++++.++
T Consensus 8 ~~~~~~~~~l~~~~~glG~~~~~~~~~-------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~ 80 (111)
T 2koj_A 8 KVGKRLNIQLKKGTEGLGFSITSRDVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEV 80 (111)
T ss_dssp SSCEEEEEEEECBTTBTCEEEEECSCS-------SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHH
T ss_pred ccCcEEEEEEEECCCccCEEEEeccCC-------CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH
Confidence 345555666667778999999987652 1224689999999999999999 99999999999999999888998
Q ss_pred HHHhcCC--C-eEEEEEEeCCEe
Q psy795 88 VDYIKKH--P-VLNLLVARKGVT 107 (109)
Q Consensus 88 ~~~l~~~--~-~v~l~v~r~~~~ 107 (109)
...++.. + .+.|.+.|.+..
T Consensus 81 ~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 81 VSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHHHHHCCCSSEEEEEEEECCCC
T ss_pred HHHHHhCCCCCeEEEEEEeCCCC
Confidence 8888764 4 889999998753
No 40
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=4.1e-16 Score=91.29 Aligned_cols=88 Identities=35% Similarity=0.430 Sum_probs=73.0
Q ss_pred CceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHH
Q psy795 9 TAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 9 ~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
.+.+.+.+.....+.+|||.+.+..+. ..|++|..|.+++||+++||++||+|++||+.++.++++.+++
T Consensus 7 ~~~~~v~l~~~~~~~~lG~~~~~~~~~----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~ 76 (101)
T 1uez_A 7 GEVRLVSLRRAKAHEGLGFSIRGGSEH----------GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAEAV 76 (101)
T ss_dssp CCCEEECCCCCCTTTCSSEEEEECTTT----------TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHHHH
T ss_pred CccEEEEEEECCCCCcccEEEeCCCCC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 345666666656678999999987663 4689999999999999999999999999999999999887777
Q ss_pred HHhcCCCeEEEEEEeCCE
Q psy795 89 DYIKKHPVLNLLVARKGV 106 (109)
Q Consensus 89 ~~l~~~~~v~l~v~r~~~ 106 (109)
..++....+.|+|.|.++
T Consensus 77 ~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 77 KALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp HHSSSSSSCCEEECCCCC
T ss_pred HhhcCCCeEEEEEEECCc
Confidence 776665578888888764
No 41
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.68 E-value=4e-16 Score=92.24 Aligned_cols=89 Identities=22% Similarity=0.403 Sum_probs=72.4
Q ss_pred eEEeeecCCCCcceecEEEec---ccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGG---GIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g---~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
.+.+.+.+.+...+|||++.+ +.+. .....|++|..|.+++||+++| |++||+|++||+.++.++++.+
T Consensus 8 ~~~~~v~l~k~~~glG~~i~~~~~g~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 80 (107)
T 1wf8_A 8 LELFPVELEKDEDGLGISIIGMGVGADA-------GLEKLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF 80 (107)
T ss_dssp EEEEEEEEECBTTBSCEEEEEEEESCCT-------TCCEEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH
T ss_pred ceEEEEEEEECCCcccEEEEecCCCCCC-------CCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 444445555666799999998 3331 1235689999999999999999 9999999999999999999999
Q ss_pred HHHHhcCCC-eEEEEEEeCCE
Q psy795 87 AVDYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~ 106 (109)
+...++..+ .+.|++.|.+.
T Consensus 81 ~~~~~~~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 81 AATVLRNTKGNVRFVIGREKP 101 (107)
T ss_dssp HHHHHHHCCSEEEEEEEEECC
T ss_pred HHHHHhcCCCeEEEEEEeCCC
Confidence 888887767 89999998654
No 42
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.68 E-value=8.7e-16 Score=88.20 Aligned_cols=76 Identities=29% Similarity=0.406 Sum_probs=63.8
Q ss_pred CCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-e
Q psy795 18 DGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-V 96 (109)
Q Consensus 18 ~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~ 96 (109)
..+...+|||++.++.. ..|++|..|.++|||+++||++||.|++||+.++.++++.++...++... .
T Consensus 9 l~r~~~g~G~~~~~~~~-----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 77 (91)
T 1g9o_A 9 LEKGPNGYGFHLHGEKG-----------KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNA 77 (91)
T ss_dssp EECBTTBCCEEEEECTT-----------CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSE
T ss_pred EEeCCCcccEEEEecCC-----------CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCc
Confidence 34445699999988775 46799999999999999999999999999999999998999999998776 5
Q ss_pred EEEEEEeC
Q psy795 97 LNLLVARK 104 (109)
Q Consensus 97 v~l~v~r~ 104 (109)
+.+.+.++
T Consensus 78 ~~~~~~~r 85 (91)
T 1g9o_A 78 VRLLVVDP 85 (91)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcC
Confidence 55554443
No 43
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=2.2e-16 Score=92.85 Aligned_cols=90 Identities=29% Similarity=0.376 Sum_probs=72.9
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
..+.+.+.+.+.+.+|||.+.++.+. ....+++|..|.+++||+++| |++||+|++||+.++.++++.++.
T Consensus 9 ~~~~~~v~l~~~~~g~G~~l~~~~~~--------~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 80 (104)
T 2djt_A 9 ASGHFSVELVRGYAGFGLTLGGGRDV--------AGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAV 80 (104)
T ss_dssp CCCCEEEEEECCSSSCCEEEECCEET--------TEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHH
T ss_pred CCceEEEEEEeCCCCccEEEEeccCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 34444555556668999999987651 113578999999999999999 999999999999999998888888
Q ss_pred HHhcCCC-eEEEEEEeCCEe
Q psy795 89 DYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~~ 107 (109)
..++..+ .+.|++.|.++.
T Consensus 81 ~~~~~~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 81 ERIRAGGPQLHLVIRRPLSG 100 (104)
T ss_dssp HHHHHTCSEEEEEECCCCCC
T ss_pred HHHHcCCCeEEEEEEECCCC
Confidence 8887655 899999987754
No 44
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.67 E-value=3.3e-16 Score=92.73 Aligned_cols=89 Identities=25% Similarity=0.450 Sum_probs=72.1
Q ss_pred EeeecCCCCcceecEEEe-----cccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 13 CLSPPDGRRVLKCGFKIG-----GGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 13 ~~~~~~~~~~~~lG~~i~-----g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
...+.+.+...+|||++. ++.+. .....|++|..|.++|||+++| |++||+|++||+.++.++++.+
T Consensus 10 ~~~v~l~k~~~~lG~~i~~~~~~gg~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 82 (108)
T 1q7x_A 10 IFEVELAKNDNSLGISVTVLFDKGGVNT-------SVRHGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ 82 (108)
T ss_dssp EEEEEEESSSCSCCEEESSSSSSBCBCT-------TSSSCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSH
T ss_pred EEEEEEEECCCCccEEEEEeccCCCccc-------cCCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 334444455679999999 66552 1235689999999999999999 9999999999999999888888
Q ss_pred HHHHhcCCC-eEEEEEEeCCEec
Q psy795 87 AVDYIKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~~~ 108 (109)
+...++..+ .+.|++.|++...
T Consensus 83 ~~~~~~~~g~~v~l~v~R~~~~~ 105 (108)
T 1q7x_A 83 AVETLRNTGQVVHLLLEKGQSPT 105 (108)
T ss_dssp HHHHHHHTTSEEEEEEECCCCSC
T ss_pred HHHHHHcCCCeEEEEEEeCCccC
Confidence 888888777 9999999987543
No 45
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.67 E-value=3.2e-16 Score=92.94 Aligned_cols=79 Identities=25% Similarity=0.423 Sum_probs=67.3
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCC---C-
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKH---P- 95 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~---~- 95 (109)
...+|||++.++... ....|++|..|.++|||+++| |++||+|++||+.++.++++.+++..++.. .
T Consensus 15 ~~~~lG~~i~g~~~~--------~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~ 86 (108)
T 3cbz_A 15 KYNFLGISIVGQSNE--------RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPG 86 (108)
T ss_dssp HHCCCCEEEEEECSS--------TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSS
T ss_pred CCCccCEEEEcCcCC--------CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCC
Confidence 457899999987541 235789999999999999999 999999999999999999999999998766 3
Q ss_pred eEEEEEEeCCEe
Q psy795 96 VLNLLVARKGVT 107 (109)
Q Consensus 96 ~v~l~v~r~~~~ 107 (109)
.+.|+|.|.+..
T Consensus 87 ~v~l~v~R~~~~ 98 (108)
T 3cbz_A 87 PIVLTVAKSGGG 98 (108)
T ss_dssp CEEEEEECCCC-
T ss_pred eEEEEEEeCCCC
Confidence 789999987643
No 46
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.67 E-value=1.1e-15 Score=88.47 Aligned_cols=91 Identities=23% Similarity=0.410 Sum_probs=74.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+...++..+|||++.+..+.. .....|++|..|.+++||+++| |++||+|++||+.++.++++.++..
T Consensus 3 ~~~~~v~l~~~~~~lG~~i~~~~~~~------~~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 76 (97)
T 2iwn_A 3 SETFDVELTKNVQGLGITIAGYIGDK------KLEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVE 76 (97)
T ss_dssp EEEEEEEEECBTTBSCEEEECCCCC----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHH
T ss_pred cEEEEEEEecCCCCCcEEEEccCCCC------CCCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45666666777889999999875420 1225689999999999999999 9999999999999999988888888
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|.+.|++..
T Consensus 77 ~~~~~~~~v~l~v~r~g~~ 95 (97)
T 2iwn_A 77 VLRHTGQTVLLTLMRRGET 95 (97)
T ss_dssp HHHTCCSEEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEEeCCCC
Confidence 877766 899999987754
No 47
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=99.66 E-value=1.8e-15 Score=87.60 Aligned_cols=88 Identities=36% Similarity=0.597 Sum_probs=70.5
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
+.+++.+.. +|||++.++... ...|+.....|++|..|.++|||++ ||++||+|++||+.++.++++.++...++.
T Consensus 5 ~~v~l~~~~-~lG~~i~gg~~~--~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~ 80 (95)
T 1mfg_A 5 IRVRVEKDP-ELGFSISGGVGG--RGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT 80 (95)
T ss_dssp EEEEEECSS-SCSEEEEECBTS--CCCSSSTTCCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH
T ss_pred EEEEECCCC-CCCEEEeCCcCc--cCCccccCCCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc
Confidence 344444543 899999987642 1234444577999999999999999 999999999999999999888888888876
Q ss_pred CC-eEEEEEEeCC
Q psy795 94 HP-VLNLLVARKG 105 (109)
Q Consensus 94 ~~-~v~l~v~r~~ 105 (109)
.+ .+.|.+.|+.
T Consensus 81 ~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 81 FQNTVELIIVREV 93 (95)
T ss_dssp CCSEEEEEEEEEC
T ss_pred CCCeEEEEEEeCC
Confidence 66 8899998854
No 48
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=3.1e-16 Score=90.76 Aligned_cols=83 Identities=27% Similarity=0.209 Sum_probs=69.2
Q ss_pred EeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhc
Q psy795 13 CLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIK 92 (109)
Q Consensus 13 ~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~ 92 (109)
...+.+.. ..+|||.+.++.+. ..+++|..|.+++||+++||++||+|++||+.++.++++.++...++
T Consensus 9 ~~~v~l~~-~~~~G~~l~gg~~~----------~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~ 77 (94)
T 2eeg_A 9 PHSVTLRG-PSPWGFRLVGGRDF----------SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIK 77 (94)
T ss_dssp CEEEEECC-SSCCSCCEECCTTT----------TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHH
T ss_pred eEEEEEeC-CCccCEEEECccCC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH
Confidence 33444433 46899999988764 46789999999999999999999999999999999988888888887
Q ss_pred CCC-eEEEEEEeCCE
Q psy795 93 KHP-VLNLLVARKGV 106 (109)
Q Consensus 93 ~~~-~v~l~v~r~~~ 106 (109)
..+ .+.|++.|++.
T Consensus 78 ~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 78 GCHDHLTLSVSSGPS 92 (94)
T ss_dssp TCCSCEEEEEECCSS
T ss_pred cCCCeEEEEEEeCCC
Confidence 766 88999998764
No 49
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=99.66 E-value=9.9e-16 Score=88.13 Aligned_cols=74 Identities=27% Similarity=0.372 Sum_probs=65.6
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
..+|||++.++.+ ..|++|..|.++|||+++| |++||+|++||+.++.+.++.++...++..+ .+.|
T Consensus 15 ~~~lG~~~~~~~~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l 83 (92)
T 2qg1_A 15 GKGLGLSIVGKRN-----------DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCSLGTVTL 83 (92)
T ss_dssp TSCCSEEEECCSS-----------SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEE
T ss_pred CCcccEEEEeccC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 5799999988765 4689999999999999999 9999999999999999888888888887666 8999
Q ss_pred EEEeCCE
Q psy795 100 LVARKGV 106 (109)
Q Consensus 100 ~v~r~~~ 106 (109)
++.|.+.
T Consensus 84 ~v~R~~~ 90 (92)
T 2qg1_A 84 EVGRIST 90 (92)
T ss_dssp EEECCCC
T ss_pred EEEcccc
Confidence 9998764
No 50
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=99.66 E-value=9.7e-16 Score=97.61 Aligned_cols=90 Identities=19% Similarity=0.323 Sum_probs=73.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+.+.++..||||++.++... .+......|++|..|.+++||+++| |++||+|++|||.++.++++.+++.
T Consensus 79 ~~~~~v~l~k~~~glG~~i~g~~~g----~~~~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~ 154 (170)
T 3egg_C 79 LELFPVELEKDSEGLGISIIGMGAG----ADMGLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAAS 154 (170)
T ss_dssp SEEEEEEEECBTTBSSEEEEEECSS----SSCCSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHH
T ss_pred ceEEEEEEEeCCCeEeEEEEecccC----CccccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4445555556667999999983210 1122335789999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeC
Q psy795 90 YIKKHP-VLNLLVARK 104 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~ 104 (109)
.++..+ .|.|+|.|.
T Consensus 155 ~l~~~g~~v~L~V~R~ 170 (170)
T 3egg_C 155 VLRNTKGRVRFMIGRE 170 (170)
T ss_dssp HHHHCCSEEEEEEEEC
T ss_pred HHHcCCCEEEEEEEeC
Confidence 999877 999999884
No 51
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.66 E-value=1.6e-15 Score=87.17 Aligned_cols=77 Identities=26% Similarity=0.225 Sum_probs=64.6
Q ss_pred cCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-
Q psy795 17 PDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP- 95 (109)
Q Consensus 17 ~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~- 95 (109)
.+.+++.+|||.+.+.. |++|..|.++|||+++||++||.|++||+.++.++++.++...++..+
T Consensus 8 ~l~~~~~g~G~~l~~~~--------------~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 73 (91)
T 2f5y_A 8 TIPRGKDGFGFTICCDS--------------PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPS 73 (91)
T ss_dssp EEECBTTBTSEEEECSS--------------SCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSS
T ss_pred EEEeCCCCccEEEecCC--------------CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC
Confidence 33455678999986532 379999999999999999999999999999999988899888888766
Q ss_pred eEEEEEEeCCEe
Q psy795 96 VLNLLVARKGVT 107 (109)
Q Consensus 96 ~v~l~v~r~~~~ 107 (109)
.+.+++.|.+..
T Consensus 74 ~v~l~v~R~~~~ 85 (91)
T 2f5y_A 74 EIILLVWRMVPQ 85 (91)
T ss_dssp EEEEEEEECC--
T ss_pred eEEEEEEeCCCC
Confidence 899999998754
No 52
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.66 E-value=7.9e-16 Score=89.25 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=67.7
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
.+.+.+|||++.+.... ....|++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .+
T Consensus 10 ~k~~~~~G~~l~~~~~~--------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v 81 (96)
T 2v90_A 10 EKGPQGFGFLLREEKGL--------DGRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQGSCV 81 (96)
T ss_dssp ECBTTBSCEEEEEEECT--------TSCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred EeCCCcccEEEEeccCC--------CCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 34556999999874331 1145799999999999999999999999999999999988899888888766 99
Q ss_pred EEEEEeCCEe
Q psy795 98 NLLVARKGVT 107 (109)
Q Consensus 98 ~l~v~r~~~~ 107 (109)
.|.+.|++..
T Consensus 82 ~l~v~r~~~~ 91 (96)
T 2v90_A 82 SLTVVDPEAD 91 (96)
T ss_dssp EEEEECCCTT
T ss_pred EEEEECCCCc
Confidence 9999998754
No 53
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=99.66 E-value=1.3e-15 Score=89.40 Aligned_cols=76 Identities=32% Similarity=0.497 Sum_probs=66.2
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-e
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-V 96 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~ 96 (109)
.+...+|||++.++.+ ..|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..+ .
T Consensus 18 ~k~~~glG~~~~~~~~-----------~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 86 (104)
T 3i4w_A 18 HRGSTGLGFNIVGGEX-----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQT 86 (104)
T ss_dssp ECBTTBTSEEEEECC------------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred EeCCCccCEEEECCCC-----------CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 3445689999998766 4589999999999999999 9999999999999999999998888888777 8
Q ss_pred EEEEEEeCC
Q psy795 97 LNLLVARKG 105 (109)
Q Consensus 97 v~l~v~r~~ 105 (109)
+.|++.|..
T Consensus 87 v~l~v~r~~ 95 (104)
T 3i4w_A 87 VTIIAQYKP 95 (104)
T ss_dssp EEEEEEECH
T ss_pred EEEEEEECc
Confidence 999998864
No 54
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.66 E-value=2.4e-15 Score=87.46 Aligned_cols=92 Identities=24% Similarity=0.338 Sum_probs=71.4
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
.+..+.+... +..+|||++.++.+... ......|++|..|.++|||+++| |++||+|++||+.++.++++.++.
T Consensus 5 ~~~~v~l~k~-~~~glG~~i~~~~~~~~----~~~~~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~ 79 (98)
T 1ihj_A 5 LIHMVTLDKT-GKKSFGICIVRGEVKDS----PNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVI 79 (98)
T ss_dssp EEEEEEEECT-TSSSCCEEEEEEEECCS----SSCCEEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHH
T ss_pred eEEEEEEEeC-CCCCcCEEEeccccCCc----cccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3444555542 45699999998876311 00124589999999999999999 999999999999999999888888
Q ss_pred HHhcCCC-eEEEEEEeCCE
Q psy795 89 DYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~ 106 (109)
..++..+ .+.|++.|+++
T Consensus 80 ~~l~~~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 80 DLIKEADFKIELEIQTFDK 98 (98)
T ss_dssp HHHHHSCSEEEEEEEEC--
T ss_pred HHHhcCCCeEEEEEEeCCC
Confidence 8887766 99999999763
No 55
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.65 E-value=5.3e-15 Score=86.83 Aligned_cols=83 Identities=52% Similarity=0.812 Sum_probs=67.9
Q ss_pred cceecEEEecccCCCCCCCCCC--CCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--eE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQG--YTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP--VL 97 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~--~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~--~v 97 (109)
..+|||++.++.+.+....+.. ....|++|..|.++|||+++||++||+|++||+.++.+.++.++...++... .+
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v 97 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVV 97 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEE
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEE
Confidence 4589999998776433332322 3467899999999999999999999999999999999888899999887543 88
Q ss_pred EEEEEeC
Q psy795 98 NLLVARK 104 (109)
Q Consensus 98 ~l~v~r~ 104 (109)
.+++.|+
T Consensus 98 ~l~v~R~ 104 (104)
T 3sfj_A 98 RLLVTRQ 104 (104)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 8888874
No 56
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.65 E-value=2e-16 Score=93.01 Aligned_cols=76 Identities=26% Similarity=0.399 Sum_probs=66.4
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||++.++.+. ..+++|..|.++|||+++||++||+|++||+.++.++++.++...++... .+.|+
T Consensus 14 ~~~~G~~l~gg~~~----------~~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~ 83 (103)
T 1wf7_A 14 PAPWGFRLQGGKDF----------NMPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKACTGSLNMT 83 (103)
T ss_dssp SSCCSCCEEEETTT----------TEEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHCSSEEEEE
T ss_pred CCccCEEEeccccC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 47899999988774 45689999999999999999999999999999999988888888777666 89999
Q ss_pred EEeCCEe
Q psy795 101 VARKGVT 107 (109)
Q Consensus 101 v~r~~~~ 107 (109)
+.|.+..
T Consensus 84 v~R~g~~ 90 (103)
T 1wf7_A 84 LQRASAA 90 (103)
T ss_dssp ECCCSCC
T ss_pred EEeCCCc
Confidence 9988754
No 57
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.65 E-value=1e-16 Score=94.02 Aligned_cols=87 Identities=26% Similarity=0.468 Sum_probs=71.9
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+.+.+.+.+|||.+.++.+. ..+++|..|.+++||+++| |++||+|++||+.++.++++.++..
T Consensus 10 ~~~~~v~l~~~~~g~G~~~~~~~~~----------~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 79 (103)
T 1wfv_A 10 FDYFTVDMEKGAKGFGFSIRGGREY----------KMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIE 79 (103)
T ss_dssp SCCEECCEECCTTSSSBCCEEETTT----------TEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHH
T ss_pred ceEEEEEEecCCCcCCEEEeccccC----------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444555556667899999887653 3579999999999999999 9999999999999999988888888
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|++.|.+..
T Consensus 80 ~~~~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 80 LIKSGGRRVRLLLKRGTGS 98 (103)
T ss_dssp HHHHHCSEECEEEECTTCS
T ss_pred HHHcCCCeEEEEEEECCCC
Confidence 887555 889999987653
No 58
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=99.65 E-value=1.2e-15 Score=88.27 Aligned_cols=77 Identities=26% Similarity=0.428 Sum_probs=64.6
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
.+...+|||.+.+... ..+++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .+
T Consensus 12 ~~~~~~~G~~l~~~~~-----------~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~ 80 (95)
T 3r68_A 12 KKGSNGYGFYLRAGPE-----------QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQT 80 (95)
T ss_dssp ECBTTBCSCEEEEC-------------CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEE
T ss_pred ecCCCcccEEEEecCC-----------CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 3455799999988666 35799999999999999999999999999999999999999999998876 77
Q ss_pred EEEEEeCCE
Q psy795 98 NLLVARKGV 106 (109)
Q Consensus 98 ~l~v~r~~~ 106 (109)
.+++.|++.
T Consensus 81 ~~~~~r~~~ 89 (95)
T 3r68_A 81 TLLVLDKEL 89 (95)
T ss_dssp EEEEEECC-
T ss_pred EEEEECCcc
Confidence 777777653
No 59
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.64 E-value=4.5e-15 Score=89.63 Aligned_cols=89 Identities=21% Similarity=0.288 Sum_probs=73.2
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
..+.+.+...++..+|||.+.+.... ..+..|++|..|.++|||+++| |++||+|++||+.++.++++.++.
T Consensus 28 ~~~~~~v~l~~~~~~lG~~l~~~~~~-------~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~ 100 (121)
T 2kom_A 28 IGKRLNIQLKKGTEGLGFSITSRDVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVV 100 (121)
T ss_dssp SCEEEEEEEECCTTCCCEEEECCCCS-------SSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHH
T ss_pred CCeEEEEEEEcCCCcEeEEEEeccCC-------cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHH
Confidence 35556666666778999999987652 1124689999999999999999 999999999999999998888888
Q ss_pred HHhcCC--C-eEEEEEEeCC
Q psy795 89 DYIKKH--P-VLNLLVARKG 105 (109)
Q Consensus 89 ~~l~~~--~-~v~l~v~r~~ 105 (109)
..++.. + .+.|+|.|.+
T Consensus 101 ~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 101 SLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp HHHHHCCSSCEEEEEEEECC
T ss_pred HHHhcCCCCCEEEEEEEeCC
Confidence 888764 4 8899999876
No 60
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=87.93 Aligned_cols=76 Identities=30% Similarity=0.473 Sum_probs=66.3
Q ss_pred CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 20 RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
+.+.+|||++.++.+. ..+++|..|.++|||+++| |++||+|++||+.++.++++.++...++... .+
T Consensus 13 k~~~glG~~l~~~~~~----------~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v 82 (93)
T 2dkr_A 13 KTDEGLGFNIMGGKEQ----------NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQGSV 82 (93)
T ss_dssp CCTTCCCEEEECSSSS----------SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCCSEE
T ss_pred eCCCCccEEEecccCC----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcE
Confidence 4568999999987653 4679999999999999996 9999999999999999888899888888666 88
Q ss_pred EEEEEeCC
Q psy795 98 NLLVARKG 105 (109)
Q Consensus 98 ~l~v~r~~ 105 (109)
.|++.|+.
T Consensus 83 ~l~v~r~~ 90 (93)
T 2dkr_A 83 KLVVRSGP 90 (93)
T ss_dssp EEEECCCC
T ss_pred EEEEEeCC
Confidence 89998865
No 61
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.64 E-value=2.3e-15 Score=91.65 Aligned_cols=93 Identities=22% Similarity=0.361 Sum_probs=75.8
Q ss_pred CceEEeeecC-CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 9 TAMECLSPPD-GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 9 ~~~~~~~~~~-~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
...+.+.+.+ .++..+|||++.++.+.. ......|++|..|.++|||+++| |++||+|++||+.++.++++.+
T Consensus 12 ~~~~~~~v~l~~~~~~~lG~~i~~~~~~~-----~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~ 86 (129)
T 2dmz_A 12 SLFETYNVELVRKDGQSLGIRIVGYVGTS-----HTGEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHD 86 (129)
T ss_dssp CCEEEEEEEECCCTTCCCCEEEEEECCCS-----SSCCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHH
T ss_pred CCCcEEEEEEEeCCCCCcCEEEEeecCCc-----ccCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH
Confidence 3456666665 445789999999876631 11235789999999999999999 9999999999999999988999
Q ss_pred HHHHhcCCC-eEEEEEEeCCE
Q psy795 87 AVDYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~ 106 (109)
+...++..+ .+.|.|.|++.
T Consensus 87 ~~~~l~~~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 87 VVEVLRNAGQVVHLTLVRRKT 107 (129)
T ss_dssp HHHHHHHCCSSEEEEEEEESS
T ss_pred HHHHHHcCCCeEEEEEEeCCc
Confidence 999888755 89999998764
No 62
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.64 E-value=6.3e-15 Score=86.69 Aligned_cols=86 Identities=27% Similarity=0.406 Sum_probs=70.9
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.+.+.+.... ..+|||.+.++.+. ..|++|..|.+++||+++||++||+|++||+.++.++++.++...
T Consensus 16 ~~~v~l~k~~-~~~lG~~~~~~~~~----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 84 (104)
T 1wi2_A 16 PRIVTLKKPP-GAQLGFNIRGGKAS----------QLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEI 84 (104)
T ss_dssp CEEEEECCCT-TCCCSEEEECCSSS----------CCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred CEEEEEEeCC-CCCccEEEEcccCC----------CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4445555433 36999999987663 467999999999999999999999999999999999888999998
Q ss_pred hcCCCeEEEEEEeCCEe
Q psy795 91 IKKHPVLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~~v~l~v~r~~~~ 107 (109)
++....+.|++.|....
T Consensus 85 l~~~~~v~l~v~r~~~~ 101 (104)
T 1wi2_A 85 LKTAREISMRVRFFSGP 101 (104)
T ss_dssp HHHSSSEEEEEECCCCS
T ss_pred HhCCCEEEEEEEECCCC
Confidence 88744889999886543
No 63
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.63 E-value=1e-15 Score=90.67 Aligned_cols=90 Identities=20% Similarity=0.250 Sum_probs=72.6
Q ss_pred CCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 8 GTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
......+.+... ..+|||++.++.+. ......|++|..|.+++||+++| |++||+|++||+.++.++++.+
T Consensus 13 ~~~~~~v~l~k~--~~glG~~i~~~~~~------~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~ 84 (108)
T 2d92_A 13 SPEVKIVELVKD--CKGLGFSILDYQDP------LDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAE 84 (108)
T ss_dssp CSSCEEEEEEEC--SSCCSEEEEEEECS------SCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHH
T ss_pred CCceEEEEEEEC--CCccCEEEeccccc------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 334455555433 46999999987551 22236789999999999999999 9999999999999999999999
Q ss_pred HHHHhcCC-C-eEEEEEEeCC
Q psy795 87 AVDYIKKH-P-VLNLLVARKG 105 (109)
Q Consensus 87 ~~~~l~~~-~-~v~l~v~r~~ 105 (109)
++..++.. . .+.|+|.|..
T Consensus 85 ~~~~l~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 85 AVEILKAVPPGLVHLGICSGP 105 (108)
T ss_dssp HHHHHHHSCSEEEEEEEECCC
T ss_pred HHHHHHhCCCCeEEEEEEcCC
Confidence 99999885 4 8899998864
No 64
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.63 E-value=5.9e-15 Score=94.86 Aligned_cols=90 Identities=34% Similarity=0.489 Sum_probs=75.2
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
++..+++..+...+|||++.++.+. +......|++|..|.++|||+++| |++||+|++||+.++.++++.+...
T Consensus 4 ~~~~~v~l~~~~~~lG~~i~~g~~~-----~~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 78 (196)
T 3gsl_A 4 MEYEEITLERGNSGLGFSIAGGTDN-----PHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVE 78 (196)
T ss_dssp EEEEEEEEECBTTBSSEEEECCTTS-----CTTSSCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred cEEEEEEEEECCCCCCEEEEcccCC-----cccCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4445555556678999999998873 333346789999999999999999 9999999999999999999988888
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++..+ .+.+++.|.+
T Consensus 79 ~~~~~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 79 ALKEAGSIVRLYVMRRK 95 (196)
T ss_dssp HHHTSCSEEEEEEEEEC
T ss_pred HHHhCCCcEEEEEEecC
Confidence 888777 8999998865
No 65
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=99.63 E-value=6e-15 Score=84.56 Aligned_cols=83 Identities=25% Similarity=0.337 Sum_probs=68.9
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
..++.+... +..+|||++.++.+. ..|++|..|.++|||+++ ||++||+|++||+.++.++++.++..
T Consensus 5 ~~~v~l~k~-~~~~lG~~i~~~~~~----------~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~ 73 (90)
T 1qav_A 5 RRRVTVRKA-DAGGLGISIKGGREN----------KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQ 73 (90)
T ss_dssp CEEEEEECC-TTTCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHH
T ss_pred cEEEEEEeC-CCCCcCEEEEcccCC----------CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 344444433 346999999987663 457999999999999999 79999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeC
Q psy795 90 YIKKHP-VLNLLVARK 104 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~ 104 (109)
.++..+ .+.|++.|.
T Consensus 74 ~~~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 74 ALKKTGKEVVLEVKYM 89 (90)
T ss_dssp HHHTCCSEEEEEEEEC
T ss_pred HHHhCCCeEEEEEEEe
Confidence 988777 888988874
No 66
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.63 E-value=2.8e-15 Score=91.45 Aligned_cols=85 Identities=19% Similarity=0.228 Sum_probs=71.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+...+...+|||++.++... ..+++|..|.++|||+++| |++||+|++||+.++.++++.++..
T Consensus 17 g~~~~v~l~~~~~g~G~~i~g~~~~----------~~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 86 (129)
T 2kpk_A 17 GKFIHTKLRKSSRGFGFTVVGGDEP----------DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVK 86 (129)
T ss_dssp SEEEEEEEEECSSCCSEEEEEEEET----------TEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHH
T ss_pred CcEEEEEEEECCCcccEEEeCccCC----------CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4445555556667999999986552 4579999999999999999 9999999999999999999999988
Q ss_pred HhcCC--C-eEEEEEEeCC
Q psy795 90 YIKKH--P-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~--~-~v~l~v~r~~ 105 (109)
.++.. + .+.|++.|..
T Consensus 87 ~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 87 IFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp HHHHSCTTEEEEEEEEECS
T ss_pred HHHhCCCCCeEEEEEEeCC
Confidence 88776 4 8999999875
No 67
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.63 E-value=4.9e-16 Score=89.37 Aligned_cols=83 Identities=25% Similarity=0.308 Sum_probs=65.5
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+.+.+. +...+|||++.+... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...+
T Consensus 5 r~v~l~--k~~~~~G~~l~~~~~-----------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 2vsp_A 5 KLCRLA--KGENGYGFHLNAIRG-----------LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRI 71 (91)
T ss_dssp EEEEEE--CBTTBTSCCCBCCTT-----------CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred EEEEEE--eCCCcccEEEEeccC-----------CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 444444 344589999977654 4578999999999999999999999999999999988889999998
Q ss_pred cCCC-eEEEEEEeCCEe
Q psy795 92 KKHP-VLNLLVARKGVT 107 (109)
Q Consensus 92 ~~~~-~v~l~v~r~~~~ 107 (109)
+..+ .+.|++.|++..
T Consensus 72 ~~~g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 72 QSSGKNVTLLVCGKKAQ 88 (91)
T ss_dssp TTSCSEEEEEEEC----
T ss_pred HcCCCEEEEEEEeCCcc
Confidence 8767 999999987754
No 68
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=99.63 E-value=4e-15 Score=86.11 Aligned_cols=79 Identities=11% Similarity=0.084 Sum_probs=65.9
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
+++..+...+|||++.++.. ..+||+.+.++++|++.| |++||+|++|||+++.+++|.++++.|++
T Consensus 8 ~V~l~K~~~~LG~tI~~~g~------------g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~ 75 (95)
T 3gge_A 8 EVNVYKSEDSLGLTITDNGV------------GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKE 75 (95)
T ss_dssp EEEEECCSSCCCEEEECSSS------------SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEcCCC------------CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHh
Confidence 33433455799999986422 347999999999999999 99999999999999999999999999998
Q ss_pred CC---eEEEEEEeCC
Q psy795 94 HP---VLNLLVARKG 105 (109)
Q Consensus 94 ~~---~v~l~v~r~~ 105 (109)
.+ .+.|.+.++.
T Consensus 76 ~~~g~~~~L~lv~p~ 90 (95)
T 3gge_A 76 LKKEELFTMKLIEPK 90 (95)
T ss_dssp SCTTCEEEEEEEEEC
T ss_pred CCCCCEEEEEEECcc
Confidence 65 7788877653
No 69
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.63 E-value=2.6e-15 Score=91.83 Aligned_cols=80 Identities=28% Similarity=0.350 Sum_probs=68.3
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCC---Ce
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKH---PV 96 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~---~~ 96 (109)
...+|||++.++... .....|++|..|.+++||+++| |++||+|++||+.++.+.++.++...++.. ..
T Consensus 46 ~~~~lG~~i~gg~~~-------~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~ 118 (131)
T 1wfg_A 46 SGAMLGLKVVGGKMT-------ESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQ 118 (131)
T ss_dssp SCTTTTEEEEEEEEC-------SSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSE
T ss_pred CCCCCCEEEecCccC-------CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCE
Confidence 467899999987763 1224589999999999999999 999999999999999999999999988765 28
Q ss_pred EEEEEEeCCEe
Q psy795 97 LNLLVARKGVT 107 (109)
Q Consensus 97 v~l~v~r~~~~ 107 (109)
+.|+|.|++..
T Consensus 119 v~l~v~R~g~~ 129 (131)
T 1wfg_A 119 VELVVSRSGPS 129 (131)
T ss_dssp EEEEEEEECSC
T ss_pred EEEEEEcCCCC
Confidence 99999997754
No 70
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.62 E-value=3.7e-15 Score=89.60 Aligned_cols=80 Identities=25% Similarity=0.397 Sum_probs=67.2
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC--
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-- 95 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-- 95 (109)
.+++.+|||++.++.+. ...|++|..|.+++||+++| |++||+|++||+.++.++++.++...++..+
T Consensus 23 ~~~~~~lG~~i~g~~~~---------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~ 93 (119)
T 1x6d_A 23 KEEGAGLGFSLAGGADL---------ENKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREP 93 (119)
T ss_dssp CCTTSCCSEEEECCSSS---------SCSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSS
T ss_pred eCCCCccCEEEeCCCCC---------CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 34467999999987762 14579999999999999999 9999999999999999989999988887665
Q ss_pred eEEEEEEeCCEe
Q psy795 96 VLNLLVARKGVT 107 (109)
Q Consensus 96 ~v~l~v~r~~~~ 107 (109)
.+.+.+.|++..
T Consensus 94 ~~~l~v~R~~~~ 105 (119)
T 1x6d_A 94 RQAVIVTRKLTP 105 (119)
T ss_dssp SEEEEEEECCCS
T ss_pred eEEEEEEcCCCc
Confidence 556788887654
No 71
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.62 E-value=6.5e-16 Score=89.38 Aligned_cols=78 Identities=31% Similarity=0.375 Sum_probs=68.6
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
+..+|||++.++.+. ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++... .+.|
T Consensus 14 ~~~~lG~~l~~g~~~----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 83 (94)
T 1vb7_A 14 GPAPWGFRISGGRDF----------HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSASPLRL 83 (94)
T ss_dssp SSSCCSBCCEEETTT----------TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEE
T ss_pred CCCCccEEEecccCC----------CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 346899999887663 46799999999999999999999999999999999998899999888776 8999
Q ss_pred EEEeCCEec
Q psy795 100 LVARKGVTS 108 (109)
Q Consensus 100 ~v~r~~~~~ 108 (109)
.+.|+++..
T Consensus 84 ~v~R~g~~~ 92 (94)
T 1vb7_A 84 QLDRSSGPS 92 (94)
T ss_dssp EEECCCCCC
T ss_pred EEEECCcCC
Confidence 999988654
No 72
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=99.62 E-value=3.8e-15 Score=85.91 Aligned_cols=83 Identities=12% Similarity=0.201 Sum_probs=68.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
++.+.+... ..+|||++.+... ..+++|..|.++|||+++| |++||+|++||+.++.+.++.++..
T Consensus 5 ~r~v~l~k~--~~~lG~~i~~~~~-----------~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~ 71 (93)
T 3o46_A 5 VKIIRLVKN--REPLGATIKKDEQ-----------TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQ 71 (93)
T ss_dssp CEEEEEEES--SSCCCEEEEECTT-----------TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHH
T ss_pred EEEEEEEeC--CCCccEEEEecCC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 444445443 3599999987633 4579999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.++... .+.|++.+...
T Consensus 72 ~l~~~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 72 ILAQSQGAITFKIIPGSK 89 (93)
T ss_dssp HHHHCCEEEEEEEECC--
T ss_pred HHHhCCCeEEEEEEeCCC
Confidence 998888 89999987654
No 73
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=99.62 E-value=6.3e-15 Score=83.91 Aligned_cols=81 Identities=25% Similarity=0.367 Sum_probs=66.8
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhh-cCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASK-SGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~-~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
..+.+.... ..+|||++.++.+. ..+++|..|.++|||++ +||++||+|++||+.++.++++.++...
T Consensus 4 ~~v~l~~~~-~~~lG~~i~~~~~~----------~~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~ 72 (87)
T 4e34_A 4 RKVLLLKED-HEGLGISITGGKEH----------GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 72 (87)
T ss_dssp EEEEEECCT-TBCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEECC-CCcccEEEEccCCC----------CCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344444333 46999999988663 45799999999999999 6899999999999999999999999999
Q ss_pred hcCCC-eEEEEEEe
Q psy795 91 IKKHP-VLNLLVAR 103 (109)
Q Consensus 91 l~~~~-~v~l~v~r 103 (109)
++..+ .+.|++.+
T Consensus 73 ~~~~~~~v~l~v~~ 86 (87)
T 4e34_A 73 LSQQRGEIEFEVVY 86 (87)
T ss_dssp HHHCCSEEEEEEEE
T ss_pred HHcCCCeEEEEEEE
Confidence 88777 88888764
No 74
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.62 E-value=5e-15 Score=89.68 Aligned_cols=82 Identities=24% Similarity=0.373 Sum_probs=69.4
Q ss_pred ecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCC
Q psy795 16 PPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKH 94 (109)
Q Consensus 16 ~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~ 94 (109)
+.+.+...+|||++.++.+. ...|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..
T Consensus 29 v~l~k~~~glG~~l~~~~~~---------~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~ 99 (124)
T 2daz_A 29 IELEKDKNGLGLSLAGNKDR---------SRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTA 99 (124)
T ss_dssp EEEECCSSCCCEEEECBSST---------TSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHS
T ss_pred EEEEeCCCccCEEEeccCCC---------CcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC
Confidence 33334467999999987652 13589999999999999999 999999999999999999999988888777
Q ss_pred C-eEEEEEEeCCE
Q psy795 95 P-VLNLLVARKGV 106 (109)
Q Consensus 95 ~-~v~l~v~r~~~ 106 (109)
+ .+.|++.|.+.
T Consensus 100 ~~~v~l~v~R~~~ 112 (124)
T 2daz_A 100 PSKVKLVFIRNED 112 (124)
T ss_dssp CSEEEEEEEECTT
T ss_pred CCeEEEEEEeCCC
Confidence 7 89999999764
No 75
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.4e-14 Score=84.57 Aligned_cols=86 Identities=28% Similarity=0.470 Sum_probs=69.8
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
..++.+.... ...|||++.+..+. ..|++|..|.++|||+++||++||+|++||+.++.++++.+++..
T Consensus 11 ~~~v~l~~~~-~~~lG~~~~~~~~~----------~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 79 (100)
T 2eeh_A 11 IHSVRVEKSP-AGRLGFSVRGGSEH----------GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKV 79 (100)
T ss_dssp ECCEEECCCS-SSSCSEEEECCTTT----------TCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEECC-CCCccEEEEccccC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHh
Confidence 4444444333 24699999886542 458999999999999999999999999999999998888888888
Q ss_pred hcCCCeEEEEEEeCCEe
Q psy795 91 IKKHPVLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~~v~l~v~r~~~~ 107 (109)
++....+.|.+.|+++.
T Consensus 80 ~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 80 LTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHSCSSEEEEEEECSCC
T ss_pred hcCCCEEEEEEEECCcC
Confidence 88755899999998753
No 76
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=99.62 E-value=1.1e-14 Score=88.29 Aligned_cols=86 Identities=20% Similarity=0.264 Sum_probs=70.6
Q ss_pred CceEEeeecCCC-CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 9 TAMECLSPPDGR-RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 9 ~~~~~~~~~~~~-~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
.......++..+ ...+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.++++.+
T Consensus 16 ~~~~~~~v~l~k~~~~~lG~~i~gg~~~----------~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~ 85 (125)
T 3hpk_A 16 IPTVPGKVTLQKDAQNLIGISIGGGAQY----------CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE 85 (125)
T ss_dssp CCEEEEEEEEECCTTSCCCEEEEECSSC----------CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH
T ss_pred CcCCCeEEEEEeCCCCCcCEEEeccCCC----------CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 333433443333 346899999998763 4679999999999999999 9999999999999999999999
Q ss_pred HHHHhcCCC-eEEEEEEeC
Q psy795 87 AVDYIKKHP-VLNLLVARK 104 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~ 104 (109)
+...++..+ .+.+++.|.
T Consensus 86 ~~~~l~~~~~~v~l~v~r~ 104 (125)
T 3hpk_A 86 VAKMIQEVKGEVTIHYNKL 104 (125)
T ss_dssp HHHHHHHSCSEEEEEEEEE
T ss_pred HHHHHHcCCCeEEEEEEEC
Confidence 999998877 888998873
No 77
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.62 E-value=5e-15 Score=84.54 Aligned_cols=82 Identities=27% Similarity=0.387 Sum_probs=64.7
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+.+.+++.+...+|||++.+..+ ..+++|..+ ++|||+ +||++||.|++||+.++.++++.++...+
T Consensus 3 ~~~~v~l~k~~~g~G~~~~~~~~-----------~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l 69 (88)
T 3bpu_A 3 ELITVHIVKGPMGFGFTIADSPG-----------GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDML 69 (88)
T ss_dssp EEEEEEEECBTTBSSCEEEECTT-----------SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cEEEEEEEcCCCceeEEEEecCC-----------CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 33445555666899999987655 457889887 999999 89999999999999999999888888888
Q ss_pred cC--CC-eEEEEEEeCCE
Q psy795 92 KK--HP-VLNLLVARKGV 106 (109)
Q Consensus 92 ~~--~~-~v~l~v~r~~~ 106 (109)
+. .+ .+.|++.|+++
T Consensus 70 ~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 70 VESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp HTSCTTCEEEEEEEEECC
T ss_pred HhCCCCCEEEEEEEeCCc
Confidence 74 24 88999998764
No 78
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=87.72 Aligned_cols=78 Identities=27% Similarity=0.366 Sum_probs=65.6
Q ss_pred CCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--
Q psy795 18 DGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-- 95 (109)
Q Consensus 18 ~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-- 95 (109)
..+.+.+|||.+.+... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++...
T Consensus 15 l~~~~~g~G~~~~~~~~-----------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (98)
T 2jxo_A 15 MKKGPSGYGFNLHSDKS-----------KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (98)
T ss_dssp EECTTTCCCEEEECCCS-----------SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTE
T ss_pred EEeCCCcccEEEEecCC-----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCc
Confidence 33456799999988765 45799999999999999999999999999999999888889888887765
Q ss_pred eEEEEEEeCCE
Q psy795 96 VLNLLVARKGV 106 (109)
Q Consensus 96 ~v~l~v~r~~~ 106 (109)
.+.+++.|+++
T Consensus 84 ~~~l~v~R~g~ 94 (98)
T 2jxo_A 84 TKLLVVDRETD 94 (98)
T ss_dssp EEEEECCHHHH
T ss_pred EEEEEEECCch
Confidence 56688877653
No 79
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=99.61 E-value=5.2e-15 Score=90.12 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=74.0
Q ss_pred CceEEeeecCCCCcceecEEEecccCCCCCCCCCC-CCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHH
Q psy795 9 TAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQG-YTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 9 ~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~-~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~ 86 (109)
...+.+.+.......+|||++.++.+.... +.. ....|++|..|.++|||+++| |++||+|++||+.++.+.++.+
T Consensus 28 ~~~r~v~l~k~~~~~~lG~~i~~~~~~~~~--~~g~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~ 105 (128)
T 1nf3_C 28 ETHRRVRLCKYGTEKPLGFYIRDGSSVRVT--PHGLEKVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ 105 (128)
T ss_dssp TTCEEEEECCSSTTSCCCEEEEEEEEEEEE--TTEEEEEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH
T ss_pred CccEEEEEEECCCCCCccEEEEcccccccc--ccccCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH
Confidence 345555555544457999999987642100 000 013479999999999999999 9999999999999999899999
Q ss_pred HHHHhcCCC-eEEEEEEeCCE
Q psy795 87 AVDYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~ 106 (109)
+...++..+ .+.|++.|.+.
T Consensus 106 ~~~~l~~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 106 VTDMMIANSRNLIITVRPANQ 126 (128)
T ss_dssp HHHHHHHTTTSEEEEEECCCC
T ss_pred HHHHHHcCCCeEEEEEEECCc
Confidence 999998766 89999998764
No 80
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.8e-15 Score=88.53 Aligned_cols=87 Identities=23% Similarity=0.361 Sum_probs=71.6
Q ss_pred CCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHH
Q psy795 8 GTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKK 86 (109)
Q Consensus 8 ~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~ 86 (109)
..+.+.+.+..... .+|||++.++.+. ..+++|..|.++|||+++ ||++||+|++||+.++.++ +.+
T Consensus 7 ~~~~~~~~v~~~~~-~~~G~~~~gg~~~----------~~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~ 74 (100)
T 2edp_A 7 GGSFQYVPVQLQGG-APWGFTLKGGLEH----------CEPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQE 74 (100)
T ss_dssp CCCCEEEEEECCSC-SCCCCCEEEEGGG----------TEEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHH
T ss_pred CCCcEEEEEEECCC-CCcCEEEeccCCC----------CCCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHH
Confidence 34566667766554 6899999987663 357899999999999999 8999999999999999886 677
Q ss_pred HHHHhcCCC-eEEEEEEeCCE
Q psy795 87 AVDYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 87 ~~~~l~~~~-~v~l~v~r~~~ 106 (109)
+...++... .+.|++.|.+.
T Consensus 75 ~~~~~~~~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 75 ALILIKGSFRILKLIVRRRNS 95 (100)
T ss_dssp HHHHHHTCCSSCEEEEEECCC
T ss_pred HHHHHHhCCCeEEEEEEeCCC
Confidence 888887766 88999999874
No 81
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=99.61 E-value=7e-15 Score=85.35 Aligned_cols=83 Identities=13% Similarity=0.167 Sum_probs=68.0
Q ss_pred ceEEeeecC-CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHH
Q psy795 10 AMECLSPPD-GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKA 87 (109)
Q Consensus 10 ~~~~~~~~~-~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~ 87 (109)
+.+.+.+.+ .+...+|||++.+ . ..|++|..|.++|||+++| |++||+|++||+.++.+.++.++
T Consensus 6 ~~~~~~v~l~~~~~~glG~~~~~--~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~ 72 (96)
T 2qkv_A 6 SLEKFNVDLMKKAGKELGLSLSP--N-----------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVS 72 (96)
T ss_dssp CCCCEEEEEECBTTBCCCEEEEE--C-----------SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHH
T ss_pred HCceEEEEEEeCCCCCccEEEEe--C-----------CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 344445554 3356789999876 2 3579999999999999999 99999999999999998888888
Q ss_pred HHHhcCCC-eEEEEEEeCC
Q psy795 88 VDYIKKHP-VLNLLVARKG 105 (109)
Q Consensus 88 ~~~l~~~~-~v~l~v~r~~ 105 (109)
...++... .+.|.+.|..
T Consensus 73 ~~~~~~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 73 YALFKGANGKVSMEVTRPK 91 (96)
T ss_dssp HHHHHTCSSEEEEEEECCC
T ss_pred HHHHhcCCCcEEEEEEeCC
Confidence 88888776 8999998864
No 82
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=99.61 E-value=1.8e-14 Score=85.02 Aligned_cols=91 Identities=24% Similarity=0.311 Sum_probs=70.4
Q ss_pred eEEeeecCCCC-cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRR-VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~-~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+...+++.+. +.+|||++.++.+.. .......|++|..|.++|||+ +||++||+|++||+.++.++++.....
T Consensus 6 ~~~~~v~l~k~~~~glG~~i~~~~~~~----~~~~~~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 6 WEQHTVTLHRAPGFGFGIAISGGRDNP----HFQSGETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp EEEEEEEEECBTTTBTCEEEEECTTSC----CTTTCCCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHH
T ss_pred ceeEEEEEEeCCCCccCEEEecCcCCC----cccCCCCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHH
Confidence 34444554444 479999999876621 111235689999999999999 899999999999999999988887777
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.+...+ .+.+.+.|.+.
T Consensus 81 ~~~~~g~~v~l~v~R~~~ 98 (107)
T 2h2b_A 81 QLRKSGKNAKITIRRKKG 98 (107)
T ss_dssp HHHTCCSEEEEEEEEESC
T ss_pred HhhCCCCEEEEEEEECCC
Confidence 666555 88999998764
No 83
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=99.61 E-value=5.8e-15 Score=86.77 Aligned_cols=84 Identities=24% Similarity=0.362 Sum_probs=70.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
...+.+.. ++..+|||++.++.+. ..|++|..|.++|||+++ ||++||+|++||+.++.++++.++..
T Consensus 10 ~~~v~l~~-~~~~~lG~~l~~g~~~----------~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~ 78 (103)
T 2dc2_A 10 IRKVLLLK-EDHEGLGISITGGKEH----------GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVT 78 (103)
T ss_dssp EEEEEEEC-CSSSCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHH
T ss_pred cEEEEEEe-CCCCccCEEEEeccCC----------CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34444443 3357999999988763 357999999999999996 89999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++..+ .+.|++.+..
T Consensus 79 ~l~~~~~~v~l~v~~~~ 95 (103)
T 2dc2_A 79 ILSQQRGEIEFEVVYVA 95 (103)
T ss_dssp HHHHCCSEEEEEEEECC
T ss_pred HHHhCCCcEEEEEEecC
Confidence 998887 8999998865
No 84
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.61 E-value=2.8e-14 Score=88.13 Aligned_cols=86 Identities=50% Similarity=0.792 Sum_probs=67.9
Q ss_pred cceecEEEecccCCCCCCCCCC--CCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--eE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQG--YTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP--VL 97 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~--~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~--~v 97 (109)
..+|||++.++.+.+....+.. ....|++|..|.++|||+++||++||+|++||+.++.++++.++...++... .+
T Consensus 37 ~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v 116 (139)
T 2vz5_A 37 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVV 116 (139)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEE
T ss_pred cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEE
Confidence 3589999988765322111111 2357899999999999999999999999999999999888899999888743 89
Q ss_pred EEEEEeCCEe
Q psy795 98 NLLVARKGVT 107 (109)
Q Consensus 98 ~l~v~r~~~~ 107 (109)
.|.+.|++..
T Consensus 117 ~l~v~R~g~~ 126 (139)
T 2vz5_A 117 RLLVTRQSLQ 126 (139)
T ss_dssp EEEEEECC--
T ss_pred EEEEEECCEE
Confidence 9999998764
No 85
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=99.60 E-value=1e-14 Score=86.05 Aligned_cols=94 Identities=23% Similarity=0.275 Sum_probs=69.4
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCC--CCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKK--SPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~--~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
+.+.+. +...+|||++.++.+....- ........+++|..|.++|||+++||++||+|++||+.++.++++.++..
T Consensus 8 r~v~l~--k~~~g~G~~l~~~~~~~~~~~~~~~~~~~p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~ 85 (107)
T 3qe1_A 8 RVVRIV--KSESGYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVD 85 (107)
T ss_dssp EEEEEE--CBTTBTCEEEECCSSSCCCCEESSSSEESCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHH
T ss_pred EEEEEE--ECCCCCCEEEEcccccCCcceeccccccCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 344444 34458999998875421000 00000123457999999999999999999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCEe
Q psy795 90 YIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~ 107 (109)
.++..+ .+.|++.|...+
T Consensus 86 ~l~~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 86 LIRAGEKELILTVLSVESE 104 (107)
T ss_dssp HHHHCSSEEEEEEECSSCC
T ss_pred HHHcCCCEEEEEEEcCCCC
Confidence 988766 999999987644
No 86
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.60 E-value=8.4e-15 Score=86.96 Aligned_cols=85 Identities=22% Similarity=0.366 Sum_probs=69.2
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+. +. .+|||++.++.+.. ...+++|..|.+++||+++| |++||+|++||+.++.++++.+++.
T Consensus 16 ~~~v~l~--k~-~glG~~i~gg~~~~--------~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~ 84 (109)
T 1wi4_A 16 FRVITVT--KE-TGLGLKILGGINRN--------EGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKS 84 (109)
T ss_dssp EEEEEEC--CS-SCCCEEEEECSSSS--------SCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHH
T ss_pred EEEEEEe--CC-CccCEEEEeccCCC--------CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4444443 33 69999999987631 13479999999999999999 9999999999999999999999999
Q ss_pred HhcCC----C-eEEEEEEeCCE
Q psy795 90 YIKKH----P-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~----~-~v~l~v~r~~~ 106 (109)
.++.. . .+.+.+.|.+.
T Consensus 85 ~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 85 IITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HHHHSCCSSSSCEEEEEECCCC
T ss_pred HHHccccCCCceEEEEEEeCCC
Confidence 88654 3 78888888764
No 87
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.60 E-value=1.6e-15 Score=88.93 Aligned_cols=83 Identities=24% Similarity=0.373 Sum_probs=68.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.+.+.+. +++.+|||.+.+... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...
T Consensus 7 ~r~v~l~--k~~~g~G~~l~~~~~-----------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 73 (102)
T 2d90_A 7 GRVVVIK--KGSNGYGFYLRAGPE-----------QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEM 73 (102)
T ss_dssp SEEEEEE--CCSSSSSCEEEECSS-----------SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHH
T ss_pred CEEEEEe--eCCCCccEEEEeecC-----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3444444 445699999988554 468999999999999999999999999999999998888888888
Q ss_pred hcCCC-eEEEEEEeCCE
Q psy795 91 IKKHP-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~ 106 (109)
++..+ .+.|++.|++.
T Consensus 74 l~~~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 74 IRKGGDQTTLLVLDKEA 90 (102)
T ss_dssp HHHSTTEEEEEECSTTC
T ss_pred HHcCCCEEEEEEEECCC
Confidence 87656 89999988653
No 88
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.60 E-value=1.5e-15 Score=90.80 Aligned_cols=83 Identities=31% Similarity=0.491 Sum_probs=69.7
Q ss_pred ecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCC
Q psy795 16 PPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKH 94 (109)
Q Consensus 16 ~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~ 94 (109)
+...+.+.+|||.+.++.+.. ..|++|..|.+++||+++| |++||+|++||+.++.++++.++...++..
T Consensus 21 v~l~~~~~glG~~l~~~~~~~---------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~ 91 (116)
T 2dm8_A 21 IEISKGRSGLGLSIVGGKDTP---------LNAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQT 91 (116)
T ss_dssp EEEECCSSCCCCCCBCCTTSS---------CSSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTC
T ss_pred EEEEECCCcccEEEeCCCCCC---------cCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC
Confidence 333455679999998876520 2589999999999999999 999999999999999998889999888877
Q ss_pred C-eEEEEEEeCCEe
Q psy795 95 P-VLNLLVARKGVT 107 (109)
Q Consensus 95 ~-~v~l~v~r~~~~ 107 (109)
. .+.|+|.|.+..
T Consensus 92 ~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 92 PQKVRLVVYRDEAH 105 (116)
T ss_dssp CSEEEEEEECCSSC
T ss_pred CCeEEEEEEeCCcc
Confidence 6 899999987653
No 89
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.60 E-value=3.5e-15 Score=89.39 Aligned_cols=91 Identities=26% Similarity=0.426 Sum_probs=73.1
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEec-cccHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFT-MVTHKKA 87 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~-~~~~~~~ 87 (109)
....+.+.... ..+|||++.++.+. .....|++|..|.++|||+++| |++||+|++||+.++. ++++.++
T Consensus 20 ~~~~v~l~k~~-~~~lG~~i~~~~~~-------~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~ 91 (117)
T 2o2t_A 20 HVEVFELLKPP-SGGLGFSVVGLRSE-------NRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQA 91 (117)
T ss_dssp CEEEEEEECCS-SSCSSCCEEEEECC-------C--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHH
T ss_pred eEEEEEEEECC-CCCCCEEEeecccC-------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHH
Confidence 44555555332 47899999987652 1224689999999999999999 9999999999999998 8899999
Q ss_pred HHHhcCCC-eEEEEEEeCCEec
Q psy795 88 VDYIKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 88 ~~~l~~~~-~v~l~v~r~~~~~ 108 (109)
...++..+ .+.|++.|++...
T Consensus 92 ~~~l~~~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 92 ISILQKAKDTVQLVIARGSLPQ 113 (117)
T ss_dssp HHHHHHCCSEEEEEEESSCCGG
T ss_pred HHHHHcCCCEEEEEEEeCCcce
Confidence 99888766 9999999987643
No 90
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=99.60 E-value=5.2e-15 Score=90.00 Aligned_cols=88 Identities=25% Similarity=0.351 Sum_probs=71.9
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEec-cccHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFT-MVTHKKAV 88 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~-~~~~~~~~ 88 (109)
.+.+.+.... ..+|||++.++.+. .....|++|..|.+++||+++| |++||+|++||+.++. ++++.++.
T Consensus 26 ~~~v~l~k~~-~~~lG~~i~g~~~~-------~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~ 97 (128)
T 2db5_A 26 IEYIDIERPS-TGGLGFSVVALRSQ-------NLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAI 97 (128)
T ss_dssp EEEEEEECCS-SSCCCCEEEEEECS-------SSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHH
T ss_pred eEEEEEEECC-CCccCEEEecccCC-------CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHH
Confidence 4444444333 36999999987763 1224589999999999999999 9999999999999997 99999999
Q ss_pred HHhcCCC-eEEEEEEeCCE
Q psy795 89 DYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~ 106 (109)
..++..+ .+.|+|.|...
T Consensus 98 ~~l~~~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 98 ALLQQTTGSLRLIVAREPV 116 (128)
T ss_dssp HHHHHCCSEEEEEEEECCC
T ss_pred HHHHcCCCeEEEEEEcCCC
Confidence 9998776 89999998753
No 91
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=99.60 E-value=1.1e-14 Score=87.51 Aligned_cols=82 Identities=30% Similarity=0.459 Sum_probs=68.1
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
...+.+. +...+|||++.+..+ ..|++|..|.++|||+++| |++||+|++||+.++.++++.+...
T Consensus 15 ~~~v~l~--k~~~glG~~l~~~~~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 81 (119)
T 1tp5_A 15 PRRIVIH--RGSTGLGFNIVGGED-----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAI 81 (119)
T ss_dssp CEEEEEE--CTTSCCCEEEEECGG-----------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHH
T ss_pred cEEEEEE--ECCCCccEEEecCCC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3444444 444689999998765 3679999999999999999 9999999999999999998888777
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++..+ .+.|.+.|++
T Consensus 82 ~~~~~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 82 ALKNAGQTVTIIAQYKP 98 (119)
T ss_dssp HHHTSCSEEEEEEEECH
T ss_pred HHHcCCCeEEEEEEECC
Confidence 777666 8899998864
No 92
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.60 E-value=5.4e-15 Score=88.66 Aligned_cols=90 Identities=22% Similarity=0.313 Sum_probs=70.8
Q ss_pred EEeeecCCCC-cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRR-VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~-~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+...+.+.+. ..+|||++.++.+.. .......|++|..|.+++||+ +||++||+|++||+.++.++++.++...
T Consensus 14 ~~~~v~l~k~~~~glG~~i~gg~~~~----~~~~~~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~ 88 (117)
T 2csj_A 14 EQYTVTLQKDSKRGFGIAVSGGRDNP----HFENGETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQ 88 (117)
T ss_dssp EEEEEEEECCSSSTTCEEEECCSSCC----CCSSCCCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHH
T ss_pred eEEEEEEEECCCCccCEEEeCCcCCc----cccCCCCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 3344444444 379999999987631 111235789999999999997 7899999999999999999999998888
Q ss_pred hcCCC-eEEEEEEeCCE
Q psy795 91 IKKHP-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~ 106 (109)
++..+ .+.|+|.|.+.
T Consensus 89 l~~~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 89 LRKSGKIAAIVVKRPRK 105 (117)
T ss_dssp HHHSCSEEEEEEEEEEE
T ss_pred HhcCCCeEEEEEEECCc
Confidence 88766 89999988654
No 93
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.60 E-value=1.6e-14 Score=83.36 Aligned_cols=80 Identities=24% Similarity=0.356 Sum_probs=65.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.+++.+. +...+|||.+.+. .|++|..|.+++||+++||++||+|++||+.++.++++.+++..
T Consensus 9 ~r~v~l~--~~~~~~G~~l~~~--------------~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~ 72 (93)
T 2dls_A 9 QRCVIIQ--KDQHGFGFTVSGD--------------RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKL 72 (93)
T ss_dssp EEEEEEE--CSSSSCCEEEECS--------------SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHH
T ss_pred CEEEEEE--eCCCceeEEEeCC--------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHh
Confidence 3444444 4457899998753 35899999999999999999999999999999999888888888
Q ss_pred hcCCCeEEEEEEeCCE
Q psy795 91 IKKHPVLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~~v~l~v~r~~~ 106 (109)
++....+.|++.|++.
T Consensus 73 ~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 73 IKSGAYVALTLLGSSS 88 (93)
T ss_dssp HTSSSEEEEEEECCCC
T ss_pred hcCCCEEEEEEEECCC
Confidence 8754499999998764
No 94
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=3.6e-15 Score=88.62 Aligned_cols=94 Identities=26% Similarity=0.383 Sum_probs=74.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+++.+... ...+|||++.++.+.. ...+......|++|..|.+++||+++| |++||+|++||+.++.++++.++..
T Consensus 10 ~~~v~l~k~-~~~~lG~~i~gg~~~~-~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~ 87 (111)
T 1uju_A 10 LRELCIQKA-PGERLGISIRGGARGH-AGNPRDPTDEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQ 87 (111)
T ss_dssp SSCEEEECC-TTCCCCEEEECCSSSS-CSCSSCTTCCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHH
T ss_pred cEEEEEEEC-CCCccCEEEECCcccc-ccccccCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 444555433 2479999999987521 112333456789999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.++..+ .+.|+|.|...
T Consensus 88 ~l~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 88 LLRSVGDTLTVLVCDGFE 105 (111)
T ss_dssp HHSSCSSEEEECCCCCCC
T ss_pred HHHcCCCeEEEEEEECCC
Confidence 998877 88999988654
No 95
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.59 E-value=4.4e-15 Score=86.53 Aligned_cols=85 Identities=25% Similarity=0.184 Sum_probs=66.7
Q ss_pred CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEE
Q psy795 20 RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLN 98 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~ 98 (109)
++..+|||++.+..... ........|++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .+.
T Consensus 10 ~~~~~~Gf~l~~~~~~~---~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~ 86 (99)
T 3khf_A 10 SSGKKYGFSLRAIRVYM---GDSDVYTVHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLLKSGNKIS 86 (99)
T ss_dssp C-CCCCCEEEEEEEEES---SSSSCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSEEE
T ss_pred eCCCCCcEEEEeccccc---CccccccCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCEEE
Confidence 45679999998765310 00011123678999999999999999999999999999999888999999888666 999
Q ss_pred EEEEeCCEe
Q psy795 99 LLVARKGVT 107 (109)
Q Consensus 99 l~v~r~~~~ 107 (109)
|++.|.+..
T Consensus 87 l~v~r~~~~ 95 (99)
T 3khf_A 87 LRTTALENT 95 (99)
T ss_dssp EEEECSCSS
T ss_pred EEEEECCCc
Confidence 999997643
No 96
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.59 E-value=2.6e-14 Score=82.86 Aligned_cols=89 Identities=27% Similarity=0.318 Sum_probs=66.4
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+.+.+.... ..+|||++.+..... ........+++|..|.++|||+++||++||+|++||+.++.++++.++...+
T Consensus 6 r~v~l~k~~-~~~~Gf~l~~~g~~~---~~~~~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 6 KVLTLEKGD-NQTFGFEIQTYGLHH---REEQRVEMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp EEEEEECCT-TCCCSEEEEEEEC----------CCEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred EEEEEEeCC-CCCccEEEEeccccc---cCCCCCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 444444433 369999998721100 0001114579999999999999999999999999999999998889988888
Q ss_pred cCCC-eEEEEEEeC
Q psy795 92 KKHP-VLNLLVARK 104 (109)
Q Consensus 92 ~~~~-~v~l~v~r~ 104 (109)
+..+ .+.|++.+.
T Consensus 82 ~~~~~~v~l~v~~~ 95 (96)
T 2ego_A 82 KASGNVLRLETLYG 95 (96)
T ss_dssp HHTTTEEEEEEECC
T ss_pred HhCCCeEEEEEEEC
Confidence 8777 888888764
No 97
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=99.59 E-value=4.7e-15 Score=87.02 Aligned_cols=87 Identities=37% Similarity=0.594 Sum_probs=69.7
Q ss_pred eecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC
Q psy795 15 SPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH 94 (109)
Q Consensus 15 ~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~ 94 (109)
.++..+.. +|||++.++... ...|+.....|++|..|.++|||++ ||++||+|++||+.++.+.++.++...++..
T Consensus 14 ~v~l~~~~-~lG~~i~gg~~~--~~~p~~~~~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~~ 89 (103)
T 1n7t_A 14 RVRVEKDP-ELGFSISGGVGG--RGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTF 89 (103)
T ss_dssp EEEEECSS-CCCBEEEECTTS--SBCSSCSSCCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHHC
T ss_pred EEEEccCC-CccEEEEcccCC--CCCccccCCCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhcC
Confidence 34444443 899999987642 1233444577999999999999999 9999999999999999998888888888866
Q ss_pred C-eEEEEEEeCC
Q psy795 95 P-VLNLLVARKG 105 (109)
Q Consensus 95 ~-~v~l~v~r~~ 105 (109)
+ .+.|++.|+.
T Consensus 90 g~~v~l~v~R~~ 101 (103)
T 1n7t_A 90 QNTVELIIVREV 101 (103)
T ss_dssp CSEEEEEEECCC
T ss_pred CCeEEEEEEecC
Confidence 6 8899998863
No 98
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=3.6e-15 Score=87.75 Aligned_cols=85 Identities=19% Similarity=0.278 Sum_probs=69.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+ .+...+|||++.++.+.. ...++|..|.+++||+++| |++||+|++||+.++.++++++++.
T Consensus 7 ~~~v~l--~k~~~glG~~i~gg~~~~---------~~~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 75 (103)
T 1ufx_A 7 GTLVRV--KKSAATLGIAIEGGANTR---------QPLPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAAR 75 (103)
T ss_dssp SEEEEE--ECCSSSCCEEEECBTTSS---------CSSCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHH
T ss_pred eEEEEE--EcCCCcCCeEEECCCCCC---------CCcEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 344444 345579999999887630 1234999999999999999 9999999999999999999999999
Q ss_pred HhcCC-----C-eEEEEEEeCCE
Q psy795 90 YIKKH-----P-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~-----~-~v~l~v~r~~~ 106 (109)
.++.. . .+.+.+.|.++
T Consensus 76 ~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 76 IIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp HHHHHHHCSSCSEEEEEECCCCC
T ss_pred HHHHhcccCCCCeEEEEEEEccc
Confidence 98873 4 78899888764
No 99
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.59 E-value=2e-15 Score=88.33 Aligned_cols=85 Identities=27% Similarity=0.228 Sum_probs=70.4
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
..+.+.+.+.+.+.+|||.+.+. .+++|..|.+++||+++||++||+|++||+.++.++++.++..
T Consensus 13 ~~~~~~v~l~~~~~g~G~~~~~~--------------~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~ 78 (100)
T 1whd_A 13 NGEKLQITIRRGKDGFGFTICCD--------------SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAH 78 (100)
T ss_dssp CCEEEEEEEECCSSSSSCBCCCS--------------SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHH
T ss_pred ccceEEEEEECCCCeeeEEEeCC--------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 35566666667778899887653 2478999999999999999999999999999999888899888
Q ss_pred HhcCCC-eEEEEEEeCCEec
Q psy795 90 YIKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~~~ 108 (109)
.++... .+.|+|.|....+
T Consensus 79 ~l~~~~~~v~l~v~R~~~~s 98 (100)
T 1whd_A 79 EIRSCPSEIILLVWRVSGPS 98 (100)
T ss_dssp HHHHCSSEEEEEEEECCSSC
T ss_pred HHHcCCCeEEEEEEECCCCC
Confidence 888766 8899999976543
No 100
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=99.59 E-value=9.3e-15 Score=89.52 Aligned_cols=85 Identities=25% Similarity=0.301 Sum_probs=68.5
Q ss_pred CcceecEEEecccCCCCC--CCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 21 RVLKCGFKIGGGIDQDYK--KSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~--~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
+..+|||++.++.+.... ..+......|++|..|.++|||+++||++||+|++||+.++.++++.+++..++..+ .+
T Consensus 37 ~~~g~Gf~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~g~~v 116 (132)
T 3l4f_D 37 DSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTL 116 (132)
T ss_dssp TTSCCCEEEEEECCSSCCSCCCCCTTSCCSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHHTTTEE
T ss_pred CCCcEeEEEeccCCCCccccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEE
Confidence 357999999998763110 001122245899999999999999999999999999999999999999999998777 88
Q ss_pred EEEEEeCC
Q psy795 98 NLLVARKG 105 (109)
Q Consensus 98 ~l~v~r~~ 105 (109)
.|++.+..
T Consensus 117 ~l~v~~~~ 124 (132)
T 3l4f_D 117 MVKVVMVT 124 (132)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 99988765
No 101
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.59 E-value=2.6e-14 Score=81.74 Aligned_cols=73 Identities=12% Similarity=0.108 Sum_probs=63.7
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhh-cCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASK-SGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~-~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
..+|||++.+... .+++|..|.++|||++ +||++||+|++||+.++.+++++++...++... .+.|
T Consensus 12 ~~~lG~~i~~~~~------------~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~~v~l 79 (88)
T 1kwa_A 12 DEPMGITLKMNEL------------NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRGSITF 79 (88)
T ss_dssp SSCCCEEEECSCG------------GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCEEEEE
T ss_pred CCceeEEEEeCCC------------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCcEEE
Confidence 4689999987422 3589999999999999 679999999999999999999999999998877 8899
Q ss_pred EEEeCCE
Q psy795 100 LVARKGV 106 (109)
Q Consensus 100 ~v~r~~~ 106 (109)
++.|.+.
T Consensus 80 ~v~r~~~ 86 (88)
T 1kwa_A 80 KIVPSYR 86 (88)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9988653
No 102
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=99.58 E-value=1.4e-14 Score=85.42 Aligned_cols=83 Identities=29% Similarity=0.365 Sum_probs=67.5
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC--CCCCCEEEEECCEEeccccHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG--LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G--l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
+..+.+.... ..+|||.+.++.+. ..+++|..|.++|||+++| |++||+|++||+.++.++++.++.
T Consensus 18 ~~~v~l~~~~-~~~~G~~~~gg~~~----------~~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~ 86 (107)
T 3nfk_A 18 LVLIRMKPDE-NGRFGFNVKGGYDQ----------KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVV 86 (107)
T ss_dssp CEEEEECCCT-TSCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred EEEEEEEcCC-CCCCCEEEEccCCC----------CCCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHH
Confidence 4444443332 37999999988763 3578999999999999999 999999999999999999999888
Q ss_pred HHhcCCC-----eEEEEEEeC
Q psy795 89 DYIKKHP-----VLNLLVARK 104 (109)
Q Consensus 89 ~~l~~~~-----~v~l~v~r~ 104 (109)
..++... .+.|++.|+
T Consensus 87 ~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 87 LFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp HHHHCGGGSBTTBEEEEEECC
T ss_pred HHHHhccccCCcEEEEEEEcC
Confidence 8887653 788888763
No 103
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=99.58 E-value=2.7e-14 Score=92.32 Aligned_cols=86 Identities=20% Similarity=0.450 Sum_probs=72.2
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
....+.+.... ..+|||++.++.+. ..|++|..|.++|||+++||++||+|++|||.++.++++.++..
T Consensus 84 ~~~~v~l~k~~-~~~lG~~i~~~~~~----------~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~ 152 (192)
T 3k1r_A 84 KLKEVRLDRLH-PEGLGLSVRGGLEF----------GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVIN 152 (192)
T ss_dssp SCEEEEEETTS-TTCCCEEEEEEGGG----------TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHH
T ss_pred ceEEEEEEeCC-CCceeEEEEccccc----------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 34445555443 46999999987653 45799999999999999999999999999999999999999999
Q ss_pred HhcCCCeEEEEEEeCCE
Q psy795 90 YIKKHPVLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~~v~l~v~r~~~ 106 (109)
.++....+.|+|.|.+.
T Consensus 153 ~l~~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 153 LIRTEKTVSIKVRHIGL 169 (192)
T ss_dssp HHTSSSEEEEEEEECCE
T ss_pred HHcCCCeEEEEEEECCc
Confidence 99883399999999875
No 104
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=99.58 E-value=9.6e-15 Score=86.34 Aligned_cols=79 Identities=13% Similarity=0.143 Sum_probs=65.6
Q ss_pred eeecCC-CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 14 LSPPDG-RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 14 ~~~~~~-~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+++++. +...+|||++.+ . ..|++|..|.++|||+++| |++||+|++||+.++.+.++.++...+
T Consensus 4 ~~v~L~k~~~~glG~~i~~--~-----------~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~ 70 (106)
T 2la8_A 4 FNVDLMKKAGKELGLSLSP--N-----------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALF 70 (106)
T ss_dssp EEEEECCBSSSTTCCEEEE--C-----------SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHH
T ss_pred EEEEEEeCCCCccCEEEEe--C-----------CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 344433 445789998876 2 3579999999999999999 999999999999999988888888888
Q ss_pred cCCC-eEEEEEEeCC
Q psy795 92 KKHP-VLNLLVARKG 105 (109)
Q Consensus 92 ~~~~-~v~l~v~r~~ 105 (109)
+... .+.|.+.|..
T Consensus 71 ~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 71 KGANGKVSMEVTRPK 85 (106)
T ss_dssp HSCBSCEEEEEEECC
T ss_pred hCCCCeEEEEEEeCC
Confidence 8776 8999999864
No 105
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.58 E-value=1.8e-14 Score=85.93 Aligned_cols=73 Identities=18% Similarity=0.334 Sum_probs=64.1
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCC-CCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGL-RMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl-~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
.+|||.+.+.. .+++|..|.+++||+++|| ++||+|++||+.++.++++.++...++... .+.|+
T Consensus 37 ~~lG~~i~~~~-------------~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 103 (113)
T 1va8_A 37 IPLGATVRNEM-------------DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMHGTLTFV 103 (113)
T ss_dssp CCCCEEEEECS-------------SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCEEEEEE
T ss_pred CceeEEEEeCC-------------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 38999997652 3689999999999999997 999999999999999989999999988777 89999
Q ss_pred EEeCCEec
Q psy795 101 VARKGVTS 108 (109)
Q Consensus 101 v~r~~~~~ 108 (109)
+.|.+...
T Consensus 104 v~r~~~~~ 111 (113)
T 1va8_A 104 LIPSSGPS 111 (113)
T ss_dssp EECCCCCC
T ss_pred EEECCccC
Confidence 99887654
No 106
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=99.58 E-value=1.6e-14 Score=86.25 Aligned_cols=81 Identities=23% Similarity=0.249 Sum_probs=66.4
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+...+++.++..||||++.+... |.+|..+.+ ++..+||++||.|++||+.++.+++|.+++..+
T Consensus 12 ~~~~V~L~Kg~~G~GFsI~~~~~-------------g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~l 76 (113)
T 3soe_A 12 LLVTIPLIKGPKGFGFAIADSPT-------------GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVL 76 (113)
T ss_dssp EEEEEEEECBTTBSSEEEEEETT-------------EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CEEEEEEEECCCcccEEEeCCCC-------------CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 44555666667899999965432 457888887 577788999999999999999999999999999
Q ss_pred cCC--C-eEEEEEEeCCEe
Q psy795 92 KKH--P-VLNLLVARKGVT 107 (109)
Q Consensus 92 ~~~--~-~v~l~v~r~~~~ 107 (109)
+.. + .+.|+|.|.+..
T Consensus 77 k~~~~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 77 KQFPVGADVPLLILRGGPP 95 (113)
T ss_dssp HHSCTTCEEEEEEEESSCC
T ss_pred HcCCCCCEEEEEEEECCcc
Confidence 975 3 899999998754
No 107
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.58 E-value=9.5e-15 Score=86.75 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=65.3
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-e
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-V 96 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~ 96 (109)
.+...+|||.+.++.+ .|++|..|.+++||+++| |++||+|++||+.++.++++.++...++..+ .
T Consensus 22 ~~~~~~lG~~l~~~~~------------~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~g~~ 89 (111)
T 2dlu_A 22 INDGSGLGFGIVGGKT------------SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNCGNS 89 (111)
T ss_dssp ECCSSCCCEEEECCSS------------SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHHCSE
T ss_pred EeCCCccCEEEeccCC------------CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCe
Confidence 3445789999987654 468999999999999999 9999999999999999888888888887666 8
Q ss_pred EEEEEEeCCE
Q psy795 97 LNLLVARKGV 106 (109)
Q Consensus 97 v~l~v~r~~~ 106 (109)
+.|++.|.+.
T Consensus 90 v~l~v~R~~~ 99 (111)
T 2dlu_A 90 VRMLVARDPA 99 (111)
T ss_dssp EEEEEEESCT
T ss_pred EEEEEEeCCC
Confidence 8999998753
No 108
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.58 E-value=2.5e-14 Score=85.02 Aligned_cols=75 Identities=19% Similarity=0.141 Sum_probs=63.0
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--e
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP--V 96 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~--~ 96 (109)
.++..+|||.+.+.. +++|..|.++|||+++||++||+|++|||.++..+++.++...++..+ .
T Consensus 30 ~k~~~~~G~~l~~~~--------------~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~ 95 (109)
T 2vsv_A 30 TAEEGDLGFTLRGNA--------------PVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDE 95 (109)
T ss_dssp CCGGGCCCEEEESSS--------------SCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSC
T ss_pred EeCCCceeEEEeCCC--------------CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCe
Confidence 345689999986543 368999999999999999999999999999999888899888888766 4
Q ss_pred EEEEEEeCCEe
Q psy795 97 LNLLVARKGVT 107 (109)
Q Consensus 97 v~l~v~r~~~~ 107 (109)
+.++|.|....
T Consensus 96 v~l~V~~~~~~ 106 (109)
T 2vsv_A 96 IEMKVVSLLDE 106 (109)
T ss_dssp EEEEEESCC--
T ss_pred EEEEEEECCCc
Confidence 99999887644
No 109
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=99.58 E-value=2.2e-14 Score=81.20 Aligned_cols=65 Identities=20% Similarity=0.359 Sum_probs=57.8
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||++.++ +|..+.+++||+++||++||+|++|||.++.+++|+++++.++..+ .+.|+
T Consensus 15 ~g~~Gf~i~~g-----------------~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V~L~ 77 (82)
T 1r6j_A 15 TGHVGFIFKNG-----------------KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTIT 77 (82)
T ss_dssp TSCCCEEEETT-----------------EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEE
T ss_pred CCCeEEEEECC-----------------EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEEEEE
Confidence 35799999642 4789999999999999999999999999999999999999999777 89998
Q ss_pred EEe
Q psy795 101 VAR 103 (109)
Q Consensus 101 v~r 103 (109)
+..
T Consensus 78 v~p 80 (82)
T 1r6j_A 78 IMP 80 (82)
T ss_dssp EEE
T ss_pred EEe
Confidence 864
No 110
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=99.58 E-value=3.7e-14 Score=83.96 Aligned_cols=86 Identities=24% Similarity=0.308 Sum_probs=67.2
Q ss_pred CCcceecEEEecccCCCCC--CCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-e
Q psy795 20 RRVLKCGFKIGGGIDQDYK--KSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-V 96 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~--~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~ 96 (109)
+...+|||++.++...... ..+......|++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .
T Consensus 16 ~~~~g~G~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~ 95 (109)
T 1q3o_A 16 KDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNT 95 (109)
T ss_dssp CTTSCCSEEEEESSCCCTTSCCCCCSSCCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTTTE
T ss_pred CCCCCCcEEEEeccCCCCcccccccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCE
Confidence 3457999999987763110 011112244899999999999999999999999999999999999999888887666 8
Q ss_pred EEEEEEeCC
Q psy795 97 LNLLVARKG 105 (109)
Q Consensus 97 v~l~v~r~~ 105 (109)
+.|++.|..
T Consensus 96 v~l~v~~~~ 104 (109)
T 1q3o_A 96 LMVKVVMVT 104 (109)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEECC
Confidence 888887753
No 111
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=9.2e-15 Score=87.74 Aligned_cols=86 Identities=14% Similarity=0.093 Sum_probs=69.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
...+.+.... ..+|||.+.++.+. ...+++|..|.+++||+++| |++||+|++||+.++.+.++.++..
T Consensus 16 ~~~v~l~k~~-~~~lG~~i~~~~~~---------~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~ 85 (117)
T 1v62_A 16 PLMVEIVKTP-GSALGISLTTTSLR---------NKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATK 85 (117)
T ss_dssp SEEEEEECCT-TCCCCCEEEEECCS---------SSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHH
T ss_pred cEEEEEEcCC-CCcccEEEEccCCC---------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 3344444322 36899999887652 02359999999999999999 9999999999999999999999999
Q ss_pred HhcCCC-eEEEEEEeCCE
Q psy795 90 YIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~~ 106 (109)
.++..+ .+.|++.|.+.
T Consensus 86 ~l~~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 86 LLASISEKVRLEILPVPQ 103 (117)
T ss_dssp HHHSCSSEEEEEECCBTT
T ss_pred HHHhCCCeEEEEEEECCC
Confidence 998766 99999998764
No 112
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.58 E-value=1.2e-14 Score=87.31 Aligned_cols=89 Identities=28% Similarity=0.364 Sum_probs=71.2
Q ss_pred CCCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc--CCCCCCEEEEECCEEeccccH
Q psy795 7 AGTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS--GLRMHDKILQCNGYDFTMVTH 84 (109)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~--Gl~~gD~i~~vn~~~i~~~~~ 84 (109)
+......+.+.... ..+|||++.++.+. ..|++|..|.++|||+++ ||++||+|++||+.++.++++
T Consensus 12 ~~~~~~~v~l~k~~-~~~~G~~l~gg~~~----------~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~ 80 (119)
T 2cs5_A 12 PHDNLVLIRMKPDE-NGRFGFNVKGGYDQ----------KMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTH 80 (119)
T ss_dssp CSSCCEEEEECCCS-SSCCSEEEEEEGGG----------TEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCH
T ss_pred CCCCeEEEEEEeCC-CCCcCEEEecccCC----------CCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCH
Confidence 34444555555433 34799999988764 457999999999999999 899999999999999999999
Q ss_pred HHHHHHhcCC-----CeEEEEEEeCCE
Q psy795 85 KKAVDYIKKH-----PVLNLLVARKGV 106 (109)
Q Consensus 85 ~~~~~~l~~~-----~~v~l~v~r~~~ 106 (109)
.++...++.. ..+.|+|.|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 81 DQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp HHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred HHHHHHHHhccccCCCEEEEEEEcccc
Confidence 9988888766 278899988753
No 113
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=99.57 E-value=2.5e-14 Score=92.23 Aligned_cols=81 Identities=41% Similarity=0.692 Sum_probs=69.0
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLV 101 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v 101 (109)
.||||++.|+.+. ...++.....|++|..|.++|||++ ||++||+|++|||.++.+.++.+++..++..+ .+.|.+
T Consensus 2 ~g~Gf~i~gg~~~--~~~~~~~~~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v 78 (195)
T 2qbw_A 2 PELGFSISGGVGG--RGNPFRPDDDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQNTVELII 78 (195)
T ss_dssp CCSSEEEEECTTS--CCCSSCTTCCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSEEEEEE
T ss_pred CcccEEEECCcCC--CCCccccCCCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEE
Confidence 5899999998752 1233444578999999999999999 99999999999999999999999999888877 899999
Q ss_pred Ee---CCE
Q psy795 102 AR---KGV 106 (109)
Q Consensus 102 ~r---~~~ 106 (109)
.| +++
T Consensus 79 ~r~~~~G~ 86 (195)
T 2qbw_A 79 VREVGNGA 86 (195)
T ss_dssp EEECSSSC
T ss_pred EEcCCCCC
Confidence 99 554
No 114
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2.2e-15 Score=88.82 Aligned_cols=83 Identities=19% Similarity=0.311 Sum_probs=68.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.+.+.+.. +..+|||.+.+... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...
T Consensus 9 ~r~v~l~k--~~~~~G~~l~~~~~-----------~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 75 (106)
T 2eei_A 9 PRLCYLVK--EGGSYGFSLKTVQG-----------KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEK 75 (106)
T ss_dssp SEEEEEEC--CSSSCSCCEECCSS-----------CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHH
T ss_pred CEEEEEEE--CCCCCCEEEEeccC-----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 34444443 46799999987655 467999999999999999999999999999999998888988888
Q ss_pred hcCCC-eEEEEEEeCCE
Q psy795 91 IKKHP-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~ 106 (109)
++..+ .+.+++.|.+.
T Consensus 76 ~~~~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 76 VKKSGSRVMFLLVDKET 92 (106)
T ss_dssp HHHHCSEEEEEECCTTT
T ss_pred HHhCCCeEEEEEEcCch
Confidence 77656 88888888653
No 115
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.57 E-value=4e-15 Score=84.07 Aligned_cols=74 Identities=30% Similarity=0.414 Sum_probs=62.7
Q ss_pred cCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-
Q psy795 17 PDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP- 95 (109)
Q Consensus 17 ~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~- 95 (109)
...+...+|||.+.+.. |++|..|.++|||+++||++||+|++||+.++.++++.++...++...
T Consensus 7 ~l~~~~~g~G~~~~~~~--------------~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 72 (83)
T 2kv8_A 7 EVARGRAGYGFTLSGQA--------------PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCSG 72 (83)
T ss_dssp EECCCSSCCSCBCCCSS--------------SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCSS
T ss_pred EEEeCCCcccEEEEcCC--------------CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 34445578999875532 479999999999999999999999999999999999899998888766
Q ss_pred eEEEEEEeC
Q psy795 96 VLNLLVARK 104 (109)
Q Consensus 96 ~v~l~v~r~ 104 (109)
.+.|++.|+
T Consensus 73 ~v~l~v~R~ 81 (83)
T 2kv8_A 73 VLHMVIAEG 81 (83)
T ss_dssp CEEEEEECC
T ss_pred eEEEEEEcC
Confidence 888998875
No 116
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.57 E-value=1.5e-14 Score=85.16 Aligned_cols=81 Identities=25% Similarity=0.320 Sum_probs=66.8
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK 93 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~ 93 (109)
+.+.... ..+|||.+..... ..|++|..|.++|||+++||++||.|++||+.++.++++.++...++.
T Consensus 5 v~l~~~~-~~~~G~~l~~~~~-----------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~ 72 (106)
T 3ngh_A 5 SKLSKQE-GQNYGFFLRIEKD-----------TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK 72 (106)
T ss_dssp EEEECCT-TCCCCCEEECCTT-----------CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH
T ss_pred EEEEeCC-CCeeCEEEEEEeC-----------CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh
Confidence 3444333 3578888877655 467899999999999999999999999999999999998888888876
Q ss_pred CC-eEEEEEEeCCE
Q psy795 94 HP-VLNLLVARKGV 106 (109)
Q Consensus 94 ~~-~v~l~v~r~~~ 106 (109)
.+ .+.|++.|.+.
T Consensus 73 ~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 73 SGNSVTLLVLDGDS 86 (106)
T ss_dssp TTTEEEEEEECHHH
T ss_pred CCCEEEEEEEECCe
Confidence 66 99999988653
No 117
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.56 E-value=3e-14 Score=85.36 Aligned_cols=92 Identities=27% Similarity=0.399 Sum_probs=71.4
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
..+.+... ...+|||++.++.+.... ........|++|..|.++|||+++| |++||+|++||+.++.++++.+++..
T Consensus 17 ~~v~l~k~-~~~~lG~~i~gg~~~~~~-~~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 94 (117)
T 2ehr_A 17 RIVEIFRE-PNVSLGISIVGGQTVIKR-LKNGEELKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEA 94 (117)
T ss_dssp EEEEECCC-SSSCCCEEECCCCSCCCS-SCCCSCCCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHH
T ss_pred EEEEEEeC-CCCccCEEEeCCcccccc-cccCCCcCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 33444433 347999999988763110 0111235789999999999999999 99999999999999999999999999
Q ss_pred hcCCC-eEEEEEEeCC
Q psy795 91 IKKHP-VLNLLVARKG 105 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~ 105 (109)
++..+ .+.|++.|..
T Consensus 95 ~~~~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 95 IKNAGNPVVFIVQSLS 110 (117)
T ss_dssp HHTSCSSEEEEECCBS
T ss_pred HHcCCCeEEEEEEECC
Confidence 88876 8889888764
No 118
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.56 E-value=1.2e-13 Score=83.91 Aligned_cols=86 Identities=34% Similarity=0.422 Sum_probs=70.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
...+.++... ..+|||.+.+.... ..|++|..|.++|||+++||++||.|++||+.++.++++.+++..
T Consensus 21 ~~~v~v~~~~-~~~lG~~~~~~~~~----------~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~ 89 (128)
T 1uf1_A 21 EKKVNLVLGD-GRSLGLTIRGGAEY----------GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRL 89 (128)
T ss_dssp EEEEEEECCS-SCCCCEEEECCTTT----------TCCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHH
T ss_pred EEEEEEEECC-CCccCEEEECcccC----------CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3455555543 25799999875432 357999999999999999999999999999999999888888888
Q ss_pred hcCCCeEEEEEEeCCEe
Q psy795 91 IKKHPVLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~~v~l~v~r~~~~ 107 (109)
++....+.|++.|.+..
T Consensus 90 ~~~~~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 90 LKSSRHLILTVKDVGRL 106 (128)
T ss_dssp HTTCSEEEEEEECCSCC
T ss_pred HhcCCeEEEEEEECCcc
Confidence 87766889999998754
No 119
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=3.5e-14 Score=82.47 Aligned_cols=84 Identities=23% Similarity=0.275 Sum_probs=67.6
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
..+.+.+.+.+.+.+|||++.+.. .|++|..|.++ |+++||++||+|++||+.++.++++.++..
T Consensus 8 ~~~~~~v~l~~~~~g~G~~i~~~~-------------~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~ 72 (96)
T 1ujv_A 8 QAELMTLTIVKGAQGFGFTIADSP-------------TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVD 72 (96)
T ss_dssp CCCCEEEEEECCSSSSSEEEEEET-------------TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHH
T ss_pred CceEEEEEEEeCCCceeEEEEcCC-------------CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 344455566667789999996432 36899999983 678899999999999999999999999999
Q ss_pred HhcCC--C-eEEEEEEeCCEec
Q psy795 90 YIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 90 ~l~~~--~-~v~l~v~r~~~~~ 108 (109)
.++.. + .+.|+|.|.+...
T Consensus 73 ~l~~~~~g~~v~l~v~R~g~~~ 94 (96)
T 1ujv_A 73 ILKDCPIGSETSLIIHRGSGPS 94 (96)
T ss_dssp HHHHSCTTSEEEEEEECCSSCS
T ss_pred HHHcCCCCCEEEEEEEECCCCC
Confidence 88874 4 8999999987653
No 120
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.55 E-value=2.2e-14 Score=85.62 Aligned_cols=92 Identities=20% Similarity=0.227 Sum_probs=70.5
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhh-cCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASK-SGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~-~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.++.+... +..+|||++.++.+..... .....+++|..|.+++||++ +||++||+|++||+.++.++++.++...
T Consensus 12 ~~v~l~~~-~~~~lGf~l~~~~~~~~~g---~~~~~~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~ 87 (114)
T 1uew_A 12 SDVVIHRK-ENEGFGFVIISSLNRPESG---STITVPHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKL 87 (114)
T ss_dssp EEEEEECC-TTSCCCEEEECCCCSCCSS---CCSCCSCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHH
T ss_pred eEEEEEEC-CCCCCCEEEEeecccCCCC---cccccCeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 33444432 3469999999876531100 01123679999999999999 9999999999999999999888999888
Q ss_pred hcCCC-eEEEEEEeCCEe
Q psy795 91 IKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~ 107 (109)
++... .+.|.+.|.+..
T Consensus 88 l~~~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 88 IKDAGLSVTLRIIPQEEL 105 (114)
T ss_dssp HHHTTTEEEEEECCCSCC
T ss_pred HHcCCCeEEEEEEeCCcC
Confidence 88766 899999998754
No 121
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.54 E-value=2e-13 Score=79.92 Aligned_cols=85 Identities=31% Similarity=0.482 Sum_probs=64.0
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
...|||++.+..+...... ......|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..+ .+.+
T Consensus 15 ~~~lG~~~~~~~~~~~~~~-~~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l 93 (103)
T 2fcf_A 15 SKSLGISIVGGRGMGSRLS-NGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGNPVVF 93 (103)
T ss_dssp -CCCCEEEECCCC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSSEEE
T ss_pred CCceeEEEEccCCCCcccc-cCCCCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEE
Confidence 3589999988655321110 01123689999999999999999 9999999999999999988899999998777 8999
Q ss_pred EEEeCCEe
Q psy795 100 LVARKGVT 107 (109)
Q Consensus 100 ~v~r~~~~ 107 (109)
++.|....
T Consensus 94 ~v~r~~~~ 101 (103)
T 2fcf_A 94 MVQSIIST 101 (103)
T ss_dssp EEECCCCC
T ss_pred EEEECCCC
Confidence 99987643
No 122
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.54 E-value=7.5e-14 Score=89.65 Aligned_cols=87 Identities=33% Similarity=0.424 Sum_probs=71.5
Q ss_pred ecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCC
Q psy795 16 PPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKH 94 (109)
Q Consensus 16 ~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~ 94 (109)
+...+...+|||++.+.... +......|++|..|.++|||+++| |++||+|++||+.++.++++.++...++..
T Consensus 104 v~l~~~~~~lG~~~~~~~~~-----~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~ 178 (196)
T 3gsl_A 104 IKLIKGPKGLGFSIAGGVGN-----QHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT 178 (196)
T ss_dssp EEEEEBTTBSCEEEEESBTS-----CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC
T ss_pred EEEecCCCCceEEEEccCCC-----cCCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC
Confidence 33344456899999886652 222335689999999999999999 999999999999999998899999999888
Q ss_pred C-eEEEEEEeCCEe
Q psy795 95 P-VLNLLVARKGVT 107 (109)
Q Consensus 95 ~-~v~l~v~r~~~~ 107 (109)
+ .+.|++.|++..
T Consensus 179 ~~~v~l~v~R~~~~ 192 (196)
T 3gsl_A 179 YDVVYLKVAKPSNA 192 (196)
T ss_dssp CEEEEEEEEEESCC
T ss_pred CCeEEEEEeCCCCc
Confidence 7 899999997643
No 123
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.54 E-value=5.6e-14 Score=83.47 Aligned_cols=74 Identities=19% Similarity=0.276 Sum_probs=64.3
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCC-CCCCEEEEECCEEeccccHHHHHHHhcCC-C-eEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGL-RMHDKILQCNGYDFTMVTHKKAVDYIKKH-P-VLN 98 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl-~~gD~i~~vn~~~i~~~~~~~~~~~l~~~-~-~v~ 98 (109)
+.+|||.+.+... ..+++|..|.++|||+++|| ++||.|++||+.++.++++.++...++.. + .+.
T Consensus 12 ~~glG~~~~~~~~-----------~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~ 80 (112)
T 1qau_A 12 VGGLGFLVKERVS-----------KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHV 80 (112)
T ss_dssp TTBTSEEEEECSS-----------SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEE
T ss_pred CCceeEEEEecCC-----------CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEE
Confidence 5799999987665 46799999999999999996 99999999999999988888888888654 3 889
Q ss_pred EEEEeCCE
Q psy795 99 LLVARKGV 106 (109)
Q Consensus 99 l~v~r~~~ 106 (109)
+.+.|++.
T Consensus 81 l~v~R~g~ 88 (112)
T 1qau_A 81 VLILRGPE 88 (112)
T ss_dssp EEEEECCT
T ss_pred EEEEeCCc
Confidence 99999874
No 124
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.54 E-value=7.5e-14 Score=84.28 Aligned_cols=88 Identities=16% Similarity=0.218 Sum_probs=68.4
Q ss_pred EeeecCCCC-cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 13 CLSPPDGRR-VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 13 ~~~~~~~~~-~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
...+.+.+. ..+|||.+.++.... .....+++|..|.+++||+++| |++||+|++||+.++.++++.++...
T Consensus 16 ~~~v~l~k~~~~glG~~l~~~~~~~------~~~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~ 89 (122)
T 1v5q_A 16 TTEVVLTADPVTGFGIQLQGSVFAT------ETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQL 89 (122)
T ss_dssp EEEEEECCCSSSSSCEEEECCSCCS------SSCSSCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHH
T ss_pred eEEEEEEeCCCCccCEEEecccccC------CcCCCCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 333443333 589999999874310 1124568999999999999999 99999999999999998888888888
Q ss_pred hcCC--C-eEEEEEEeCCE
Q psy795 91 IKKH--P-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~--~-~v~l~v~r~~~ 106 (109)
++.. . .+.|++.|++.
T Consensus 90 l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 90 LRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp HHHHTTTTCEEEEEEEECC
T ss_pred HHhCCCCCeEEEEEEECCc
Confidence 7765 4 88999999764
No 125
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.54 E-value=3.6e-14 Score=86.13 Aligned_cols=77 Identities=27% Similarity=0.384 Sum_probs=65.4
Q ss_pred CCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--
Q psy795 18 DGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-- 95 (109)
Q Consensus 18 ~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-- 95 (109)
..+.+.+|||.+.+... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++...
T Consensus 15 l~~~~~g~G~~l~~~~~-----------~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 83 (128)
T 2kjd_A 15 MKKGPSGYGFNLHSDKS-----------KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDE 83 (128)
T ss_dssp EECCSSSCCEEEEECSS-----------SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSE
T ss_pred EecCCCcccEEEEecCC-----------CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 33445789999988765 45899999999999999999999999999999999988888888888765
Q ss_pred eEEEEEEeCC
Q psy795 96 VLNLLVARKG 105 (109)
Q Consensus 96 ~v~l~v~r~~ 105 (109)
.+.+.+.|.+
T Consensus 84 ~~~l~v~R~g 93 (128)
T 2kjd_A 84 TKLLVVDRET 93 (128)
T ss_dssp EEEEEECHHH
T ss_pred EEEEEEEeCC
Confidence 6678887765
No 126
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.54 E-value=6.4e-14 Score=81.61 Aligned_cols=86 Identities=16% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCCCceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccH
Q psy795 6 QAGTAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTH 84 (109)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~ 84 (109)
-.+-....+.+.... ..+||+++....+ .|++|..|.++|||+++| |++||+|++||+.++.++++
T Consensus 8 ~~~~~~~~v~l~K~~-~~~lG~~l~~~~~------------~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~ 74 (97)
T 2ejy_A 8 HSGHMVRLIQFEKVT-EEPMGICLKLNEK------------QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSV 74 (97)
T ss_dssp -----CEEEEEEECS-SSCCSEEEEECTT------------CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCS
T ss_pred cCCCccEEEEEEeCC-CCCeeEEEEeCCC------------CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 344455556665443 3689999975432 479999999999999999 99999999999999998778
Q ss_pred HHHHHHhcCCC-eEEEEEEeC
Q psy795 85 KKAVDYIKKHP-VLNLLVARK 104 (109)
Q Consensus 85 ~~~~~~l~~~~-~v~l~v~r~ 104 (109)
.++...++... .+.|++.+.
T Consensus 75 ~~~~~~l~~~~~~v~L~V~~~ 95 (97)
T 2ejy_A 75 DQLQKAMKETKGMISLKVIPN 95 (97)
T ss_dssp HHHHHHHHHCCEEEEEEEECC
T ss_pred HHHHHHHHcCCCeEEEEEEEC
Confidence 88888888767 888888754
No 127
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.53 E-value=6.4e-14 Score=83.91 Aligned_cols=75 Identities=27% Similarity=0.351 Sum_probs=63.4
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
...+|||.+.+..+ .|++|..|.+++||+++||++||+|++||+.++.++++.+....+.... .+.|
T Consensus 28 ~~~~lG~~~~~~~~------------~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l 95 (117)
T 1uit_A 28 GSEPLGISIVSGEK------------GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITI 95 (117)
T ss_dssp SSCCCCEEEEECTT------------SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEE
T ss_pred CCCCccEEEEccCC------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEE
Confidence 34689999987654 4799999999999999999999999999999999988887776666555 8999
Q ss_pred EEEeCCEe
Q psy795 100 LVARKGVT 107 (109)
Q Consensus 100 ~v~r~~~~ 107 (109)
.+.|++..
T Consensus 96 ~v~r~~~~ 103 (117)
T 1uit_A 96 LAQYNPHV 103 (117)
T ss_dssp EECCCSCC
T ss_pred EEEECCch
Confidence 99987653
No 128
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.53 E-value=9.2e-14 Score=90.21 Aligned_cols=80 Identities=23% Similarity=0.308 Sum_probs=68.3
Q ss_pred CCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEecc--ccHHHHHHHhcCCC
Q psy795 19 GRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTM--VTHKKAVDYIKKHP 95 (109)
Q Consensus 19 ~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~--~~~~~~~~~l~~~~ 95 (109)
.+...+|||++.++.+.. ...|++|..|.++|||+++| |+.||+|++|||.++.+ +++.++...++...
T Consensus 25 ~~~~~~lG~~i~~g~~~~--------~~~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~ 96 (206)
T 3r0h_A 25 KVEKKPMGVIVCGGKNNH--------VTTGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTY 96 (206)
T ss_dssp ECTTSCCCEEEECCSSSS--------CCSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCC
T ss_pred EeCCCCcCEEEecccCCC--------CCCCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcC
Confidence 344689999999987731 12589999999999999999 99999999999999999 88999888888876
Q ss_pred -e-EEEEEEeCCE
Q psy795 96 -V-LNLLVARKGV 106 (109)
Q Consensus 96 -~-v~l~v~r~~~ 106 (109)
. +.|++.|.+.
T Consensus 97 ~~~v~l~v~R~~~ 109 (206)
T 3r0h_A 97 EKAVTLTVFRADP 109 (206)
T ss_dssp SSEEEEEEECCSS
T ss_pred CCceEEEEEeccc
Confidence 5 9999998764
No 129
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.53 E-value=2.5e-13 Score=82.18 Aligned_cols=93 Identities=27% Similarity=0.399 Sum_probs=69.2
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+.+.+.... ..+|||++.+..+...... ......|++|..|.++|||+++| |++||+|++||+.++.++++.++...
T Consensus 26 ~~v~l~k~~-~~~lGi~v~~~~~~~~~~~-~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~ 103 (123)
T 2iwq_A 26 RRVELWREP-SKSLGISIVGGRGMGSRLS-NGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEA 103 (123)
T ss_dssp EEEEECCCT-TSCCSEEEEECC----------CCCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEecC-CCCccEEEEeccCcccccc-ccCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 344444332 3689999988665321110 11224689999999999999999 99999999999999999888999998
Q ss_pred hcCCC-eEEEEEEeCCE
Q psy795 91 IKKHP-VLNLLVARKGV 106 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~ 106 (109)
++..+ .+.|++.|...
T Consensus 104 l~~~~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 104 IRKAGNPVVFMVQSIIS 120 (123)
T ss_dssp HHHCCSSEEEEEECCCC
T ss_pred HHcCCCeEEEEEEECCc
Confidence 88777 89999988654
No 130
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=99.53 E-value=9.5e-14 Score=83.00 Aligned_cols=82 Identities=21% Similarity=0.326 Sum_probs=65.1
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+.+.+.... ..+|||++.++.+. ..+++|..|.++|||+++| |++||+|++|||.++.+.++.++...
T Consensus 26 ~~V~l~~~~-~~~lG~~l~~~~~~----------~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~ 94 (114)
T 2gzv_A 26 GKVTLQKDA-QNLIGISIGGGAQY----------CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKM 94 (114)
T ss_dssp EEEEEECCT-TSCCSEEEEECCC------------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred EEEEEEECC-CCcEeEEEEeCCCC----------CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 334444333 34699999987663 3579999999999999999 99999999999999987788898888
Q ss_pred hcCCC-eEEEEEEeC
Q psy795 91 IKKHP-VLNLLVARK 104 (109)
Q Consensus 91 l~~~~-~v~l~v~r~ 104 (109)
++... .+.|++.+.
T Consensus 95 l~~~~~~v~l~v~~~ 109 (114)
T 2gzv_A 95 IQEVKGEVTIHYNKL 109 (114)
T ss_dssp HHHCCSEEEEEEECC
T ss_pred HHcCCCeEEEEEEec
Confidence 87666 778887653
No 131
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.52 E-value=9.6e-14 Score=82.73 Aligned_cols=84 Identities=27% Similarity=0.391 Sum_probs=68.3
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
+.+.+... +..+|||.+.++.+. ..|++|..|.+++||+++||++||+|++||+.++.++++.++...+
T Consensus 17 ~~v~~~~~-~~~~lG~~l~~~~~~----------~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~ 85 (114)
T 1x5n_A 17 KKVFISLV-GSRGLGCSISSGPIQ----------KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVL 85 (114)
T ss_dssp EEEEECCC-SSCCCCEEEEECCSS----------SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHH
T ss_pred EEEEEEEc-CCCceeEEEeecCCC----------CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34444443 467999999987653 4689999999999999999999999999999999988877777777
Q ss_pred cCCCeEEEEEEeC-CE
Q psy795 92 KKHPVLNLLVARK-GV 106 (109)
Q Consensus 92 ~~~~~v~l~v~r~-~~ 106 (109)
+....+.+.+.|. +.
T Consensus 86 ~~~~~v~l~v~r~~g~ 101 (114)
T 1x5n_A 86 KSSRSLTISIVAAAGR 101 (114)
T ss_dssp HHCSSEEEEECSSTTT
T ss_pred hcCCeEEEEEEcCCCC
Confidence 6555788888887 53
No 132
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.52 E-value=1.8e-14 Score=85.64 Aligned_cols=82 Identities=29% Similarity=0.457 Sum_probs=68.2
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+. +.+.+|||++.+..+ ..+++|..|.+++||+++| |++||+|++||+.++.++++.++..
T Consensus 16 ~~~v~l~--k~~~glG~~l~~~~~-----------~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~ 82 (113)
T 1um7_A 16 PRKIILH--KGSTGLGFNIVGGED-----------GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAA 82 (113)
T ss_dssp EEEEEEE--CCSSCSSBCCBCCST-----------TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHH
T ss_pred eEEEEEE--ECCCcccEEEEeccC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4444443 455799999987765 4578999999999999999 9999999999999999998888888
Q ss_pred HhcCCC-eEEEEEEeCC
Q psy795 90 YIKKHP-VLNLLVARKG 105 (109)
Q Consensus 90 ~l~~~~-~v~l~v~r~~ 105 (109)
.++... .+.|.+.|++
T Consensus 83 ~~~~~~~~v~l~v~r~~ 99 (113)
T 1um7_A 83 ALKRAGQSVTIVAQYRP 99 (113)
T ss_dssp HHHSCCSEEEEEEECCH
T ss_pred HHHhCCCcEEEEEEECc
Confidence 887766 8889998764
No 133
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=99.51 E-value=2.8e-14 Score=96.36 Aligned_cols=75 Identities=28% Similarity=0.363 Sum_probs=67.5
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhh-cCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASK-SGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~-~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
..+|||++.++.+. ..|++|..|.+++||++ +||++||+|++|||.++.++++.+++..++..+ .+.|
T Consensus 88 ~~glGf~I~gg~d~----------~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~g~~V~L 157 (263)
T 1z87_A 88 AGGLGISIKGGREN----------KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVL 157 (263)
T ss_dssp TCCCCCEEEEETTT----------TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHCCSCCCE
T ss_pred CCCEeEEEeeccCC----------CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcCCCeEEE
Confidence 47999999998763 46799999999999999 689999999999999999999999999998887 8999
Q ss_pred EEEeCCE
Q psy795 100 LVARKGV 106 (109)
Q Consensus 100 ~v~r~~~ 106 (109)
+|.|.+.
T Consensus 158 ~V~R~~~ 164 (263)
T 1z87_A 158 EVKYMKE 164 (263)
T ss_dssp EEECCSS
T ss_pred EEEeCcc
Confidence 9998653
No 134
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.51 E-value=7e-15 Score=86.35 Aligned_cols=75 Identities=31% Similarity=0.430 Sum_probs=65.8
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||.+.++.+. ..+++|..|.++|||+++||++||+|++||+.++.++++.++...++... .+.|.
T Consensus 14 ~~~lG~~l~~g~~~----------~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 83 (103)
T 1v5l_A 14 PAPWGFRLSGGIDF----------NQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK 83 (103)
T ss_dssp SSCCSBCCEEETTT----------TEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTCCSEEECE
T ss_pred CCCcCEEEeccccC----------CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEE
Confidence 45899999887763 34789999999999999999999999999999999988899999888767 89999
Q ss_pred EEeCCE
Q psy795 101 VARKGV 106 (109)
Q Consensus 101 v~r~~~ 106 (109)
+.|+++
T Consensus 84 v~R~g~ 89 (103)
T 1v5l_A 84 IDRAET 89 (103)
T ss_dssp ECCCTT
T ss_pred EEECCe
Confidence 998764
No 135
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=99.51 E-value=4e-13 Score=77.76 Aligned_cols=82 Identities=23% Similarity=0.324 Sum_probs=61.8
Q ss_pred eEEeeecCCCC-cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRR-VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~-~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.++.... ..+|||++...... ...|++|..|.++|||+++||++||+|++||+.++.++++.++..
T Consensus 7 ~~~v~i~k~~~~~~~~Gf~v~~~~~~---------~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~ 77 (94)
T 3kzd_A 7 THSIHIEKSDTAADTYGFSLSSVEED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKD 77 (94)
T ss_dssp EEEEEEEC------CCSEEEEEECSS---------SSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHH
T ss_pred eeEEEEEeCCCCcCCcCEEEEecCCC---------CcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 45555555442 35899999875441 145799999999999999999999999999999999999999888
Q ss_pred HhcCCCeEEEEEE
Q psy795 90 YIKKHPVLNLLVA 102 (109)
Q Consensus 90 ~l~~~~~v~l~v~ 102 (109)
.+.+. .+.++|+
T Consensus 78 ~l~~~-~l~ltV~ 89 (94)
T 3kzd_A 78 FLSQP-SLGLLVR 89 (94)
T ss_dssp HHHSS-EEEEEEE
T ss_pred HHhCC-eEEEEEE
Confidence 87743 4555554
No 136
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=7.7e-14 Score=83.50 Aligned_cols=86 Identities=22% Similarity=0.300 Sum_probs=66.7
Q ss_pred ceEEeeecCCCCc-ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRV-LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~-~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
....+.+...... .+|||++.+..+. ...+++|..|.+++||+++||++||+|++||+.++.++++.++.
T Consensus 15 ~~~~v~l~k~~~~~~~~G~~v~~~~~~---------~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~ 85 (114)
T 2d8i_A 15 VTQSIHIEKSDTAADTYGFSLSSVEED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLK 85 (114)
T ss_dssp EEEEEEEECSCTTTCCCCCEEEEEEET---------TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHH
T ss_pred ceEEEEEEeCCCCccccCEEEEecCcC---------CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 3445555544332 3799999875441 02479999999999999999999999999999999988888888
Q ss_pred HHhcCCCeEEEEEEeCC
Q psy795 89 DYIKKHPVLNLLVARKG 105 (109)
Q Consensus 89 ~~l~~~~~v~l~v~r~~ 105 (109)
..++.. .+.|++.|..
T Consensus 86 ~~l~~~-~v~l~v~R~p 101 (114)
T 2d8i_A 86 DFLSQP-SLGLLVRTYP 101 (114)
T ss_dssp HHHTSS-EEEEEEEECC
T ss_pred HHHhCC-cEEEEEEECC
Confidence 888753 7888888864
No 137
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.50 E-value=1.9e-13 Score=82.83 Aligned_cols=73 Identities=34% Similarity=0.570 Sum_probs=62.3
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLN 98 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~ 98 (109)
..+|||.+.++.+ .|++|..|.++|||+++||++||+|++||+.++.++++.++...+.. .+ .+.
T Consensus 38 ~~~lG~~l~~~~~------------~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~ 105 (124)
T 3tsv_A 38 GDSVGLRLAGGND------------VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVT 105 (124)
T ss_dssp SSCCCEEEEECTT------------SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEE
T ss_pred CCceeEEEecCCC------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEE
Confidence 3689999987544 46999999999999999999999999999999999988888887663 34 889
Q ss_pred EEEEeCCE
Q psy795 99 LLVARKGV 106 (109)
Q Consensus 99 l~v~r~~~ 106 (109)
|++.|++.
T Consensus 106 l~v~R~~~ 113 (124)
T 3tsv_A 106 ILAQKKKD 113 (124)
T ss_dssp EEEEECHH
T ss_pred EEEEECCc
Confidence 99988753
No 138
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=99.50 E-value=2.5e-13 Score=77.64 Aligned_cols=73 Identities=30% Similarity=0.373 Sum_probs=61.8
Q ss_pred cCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC
Q psy795 17 PDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP 95 (109)
Q Consensus 17 ~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~ 95 (109)
........|||.+.+ |++|..|.++|||+++| |++||+|++||+.++.+.++.++...++...
T Consensus 7 ~~~~~~~~~G~~~~~----------------gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~ 70 (88)
T 3e17_A 7 MKSRANEEYGLRLGS----------------QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR 70 (88)
T ss_dssp ECBTTBCCCCEEEEE----------------EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT
T ss_pred EeCCCCCCCCEEEeC----------------CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC
Confidence 333344578888743 48999999999999999 9999999999999999999999999999888
Q ss_pred -eEEEEEEeCC
Q psy795 96 -VLNLLVARKG 105 (109)
Q Consensus 96 -~v~l~v~r~~ 105 (109)
.+.|++.+..
T Consensus 71 ~~v~L~v~~~~ 81 (88)
T 3e17_A 71 GKLQLVVLRDL 81 (88)
T ss_dssp TEEEEEECCC-
T ss_pred CeEEEEEeCCC
Confidence 9999887653
No 139
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.50 E-value=1.4e-13 Score=82.62 Aligned_cols=73 Identities=26% Similarity=0.332 Sum_probs=62.2
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHHHhcCC----C-e
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVDYIKKH----P-V 96 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~----~-~ 96 (109)
.||||++.++.+.. ...++|..|.++|||+++ ||++||+|++|||.++.++++.++...++.. + .
T Consensus 28 ~glG~~i~gg~~~~---------~~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~ 98 (118)
T 1v6b_A 28 GSLDLALEGGVDSP---------VGKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDW 98 (118)
T ss_dssp SCCCCEEEEBTTSS---------SCSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSE
T ss_pred CccCEEEEcccCCC---------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCe
Confidence 48999999887631 234999999999999999 7999999999999999999999888887643 4 8
Q ss_pred EEEEEEeC
Q psy795 97 LNLLVARK 104 (109)
Q Consensus 97 v~l~v~r~ 104 (109)
+.|++.|.
T Consensus 99 v~l~v~r~ 106 (118)
T 1v6b_A 99 IDLVVAVC 106 (118)
T ss_dssp EEEEEECC
T ss_pred EEEEEEeC
Confidence 89999884
No 140
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.50 E-value=3.2e-13 Score=78.95 Aligned_cols=86 Identities=13% Similarity=0.128 Sum_probs=66.5
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
..+.+.+....+ .+|||++.+... .....+++|..|.+++||+++ +|++||+|++||+.++.+.++.++.
T Consensus 9 ~~~~v~l~k~~g-~~lG~~i~~~~~--------~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~ 79 (101)
T 2yt7_A 9 NCREVHLEKRRG-EGLGVALVESGW--------GSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQ 79 (101)
T ss_dssp CCEEEEEECCTT-CCCCEEEEECCC--------SSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHH
T ss_pred ceEEEEEEeCCC-CccCEEEEeCCC--------CCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 345555554443 589999975322 112346999999999999995 4999999999999999888899999
Q ss_pred HHhcC--CC-eEEEEEEeC
Q psy795 89 DYIKK--HP-VLNLLVARK 104 (109)
Q Consensus 89 ~~l~~--~~-~v~l~v~r~ 104 (109)
..++. .+ .+.|++.|.
T Consensus 80 ~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 80 AAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHHHTTTSSEEEEEECCC
T ss_pred HHHHhCCCCCeEEEEEEeC
Confidence 99886 34 889988774
No 141
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.49 E-value=5.2e-14 Score=83.97 Aligned_cols=74 Identities=27% Similarity=0.368 Sum_probs=63.8
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||.+..... ..|++|..|.++|||+++||++||+|++||+.++.++++.++...++..+ .+.|+
T Consensus 24 ~~~~G~~l~~~~~-----------~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~ 92 (114)
T 2edz_A 24 GQNYGFFLRIEKD-----------TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKSGNSVTLL 92 (114)
T ss_dssp TCCCSCEEECCTT-----------CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHTCSEEEEE
T ss_pred CCcccEEEEEecC-----------CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEE
Confidence 4578888876544 46789999999999999999999999999999999988888888887666 99999
Q ss_pred EEeCCE
Q psy795 101 VARKGV 106 (109)
Q Consensus 101 v~r~~~ 106 (109)
+.|.++
T Consensus 93 v~R~~~ 98 (114)
T 2edz_A 93 VLDGDS 98 (114)
T ss_dssp EECHHH
T ss_pred EEECCc
Confidence 998754
No 142
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.49 E-value=5.7e-13 Score=76.51 Aligned_cols=79 Identities=15% Similarity=0.278 Sum_probs=64.6
Q ss_pred CceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHH
Q psy795 9 TAMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 9 ~~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
.......+.......+|||.+.+ | +|..|.++|||+++||++||+|++|||.++.+.++.++.
T Consensus 10 ~~~~~~~i~~~~~~~~lG~~~~~----------------G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~ 72 (90)
T 1y7n_A 10 GNVTTVLIRRPDLRYQLGFSVQN----------------G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV 72 (90)
T ss_dssp SSCEEEEEEESSTTSCCCEEEET----------------T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHH
T ss_pred CCcceEEEEeCCCccccCeEecC----------------C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH
Confidence 33455555566666789998832 2 789999999999999999999999999999888889999
Q ss_pred HHhcCCC-eEEEEEEeC
Q psy795 89 DYIKKHP-VLNLLVARK 104 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~ 104 (109)
..++..+ .+.|++.+.
T Consensus 73 ~~l~~~g~~v~l~v~p~ 89 (90)
T 1y7n_A 73 HILSNAVGEIHMKTMPA 89 (90)
T ss_dssp HHHHHCCEEEEEEEECC
T ss_pred HHHHcCCCeEEEEEEEC
Confidence 9988767 888888753
No 143
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.48 E-value=4.4e-13 Score=81.09 Aligned_cols=87 Identities=29% Similarity=0.395 Sum_probs=67.4
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+.....+.+|||.+....+. ....|++|..|.+++||+++| |++||+|++||+.++.+ +.++..
T Consensus 20 ~~~~~~~~~~~~~~lG~~~~~~~~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~--~~~~~~ 89 (124)
T 1wh1_A 20 LEEVDLYRMNSQDKLGLTVCYRTDD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN--REEAVA 89 (124)
T ss_dssp ECCBCCCCSSTTCCCCEEEECCCCC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCS--HHHHHH
T ss_pred EEEEEEEecCCCCcccEEEEecCCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCC--HHHHHH
Confidence 3333343444456899999877652 124689999999999999999 99999999999999985 467777
Q ss_pred HhcCC-C-eEEEEEEeCCEe
Q psy795 90 YIKKH-P-VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~-~-~v~l~v~r~~~~ 107 (109)
.++.. + .+.|++.|++..
T Consensus 90 ~l~~~~g~~v~l~v~R~g~~ 109 (124)
T 1wh1_A 90 LLTSEENKNFSLLIARPELQ 109 (124)
T ss_dssp HHTCSSCCSCCEEEEECSSC
T ss_pred HHHhCCCCEEEEEEEECCEE
Confidence 77765 3 889999998754
No 144
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.48 E-value=6.8e-13 Score=85.90 Aligned_cols=76 Identities=24% Similarity=0.333 Sum_probs=67.0
Q ss_pred CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhc-CCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 20 RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKS-GLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~-Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
+...+|||++.++.+. ..+++|..|.++|||+++ ||++||+|++|||.++.++++.++...+...+ .+
T Consensus 16 ~~~~~lG~~i~~~~~~----------~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v 85 (200)
T 2qt5_A 16 KEGTTLGLTVSGGIDK----------DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKNVGERV 85 (200)
T ss_dssp CTTCCCCEEEECCTTS----------SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHTCCSEE
T ss_pred CCCCCCCEEEecccCC----------CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeE
Confidence 4467999999988764 456899999999999999 89999999999999999999999888887777 89
Q ss_pred EEEEEeCC
Q psy795 98 NLLVARKG 105 (109)
Q Consensus 98 ~l~v~r~~ 105 (109)
.+.+.|.+
T Consensus 86 ~l~v~R~~ 93 (200)
T 2qt5_A 86 VLEVEYEL 93 (200)
T ss_dssp EEEEEEEC
T ss_pred EEEEeccC
Confidence 99998865
No 145
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.48 E-value=3.1e-13 Score=101.88 Aligned_cols=92 Identities=34% Similarity=0.472 Sum_probs=76.9
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
..+...+.+.+...||||++.|+.+. ++.....|++|..|.+++||+++| |+.||+|++|||.++.++++.+++
T Consensus 57 ~~~~~~v~l~k~~~glGf~i~gg~~~-----~~~~~~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~ 131 (721)
T 2xkx_A 57 EMEYEEITLERGNSGLGFSIAGGTDN-----PHIGDDPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAV 131 (721)
T ss_pred CceEEEEEEEeCCCCCCEEEeCCcCC-----cccCCCCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 34444555556667999999998873 334457889999999999999999 999999999999999999999999
Q ss_pred HHhcCCC-eEEEEEEeCCE
Q psy795 89 DYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 89 ~~l~~~~-~v~l~v~r~~~ 106 (109)
..++..+ .+.|+|.|.+.
T Consensus 132 ~~l~~~g~~v~l~v~R~~~ 150 (721)
T 2xkx_A 132 EALKEAGSIVRLYVMRRKP 150 (721)
T ss_pred HHhhccccccceEEEeccc
Confidence 9888777 88999988764
No 146
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.47 E-value=1.1e-13 Score=83.92 Aligned_cols=85 Identities=16% Similarity=0.223 Sum_probs=69.0
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCC-CCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGL-RMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl-~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
...+.+..+. +.+|||.+.+... ..+++|..|.++|||+++|| ++||+|++||+.++.++++.++..
T Consensus 9 ~~~v~l~~~~-~~glG~~~~~~~~-----------~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~ 76 (127)
T 1b8q_A 9 VISVRLFKRK-VGGLGFLVKERVS-----------KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALE 76 (127)
T ss_dssp SEEEEEECTT-TSCCSCCEEECTT-----------SSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHH
T ss_pred eEEEEEEeCC-CCcEeEEEEecCC-----------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 4444444332 4699999987654 45799999999999999997 999999999999999988889888
Q ss_pred HhcCCC--eEEEEEEeCCEe
Q psy795 90 YIKKHP--VLNLLVARKGVT 107 (109)
Q Consensus 90 ~l~~~~--~v~l~v~r~~~~ 107 (109)
.++... .+.+.+.|++..
T Consensus 77 ~l~~~~g~~v~l~v~R~g~~ 96 (127)
T 1b8q_A 77 VLRGIASETHVVLILRGPEG 96 (127)
T ss_dssp HHHSCCSSCEEEEEECCCCS
T ss_pred HHHhCCCCeEEEEEEeCCce
Confidence 887653 889999998753
No 147
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=6e-13 Score=76.47 Aligned_cols=70 Identities=11% Similarity=0.159 Sum_probs=60.9
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEE
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLN 98 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~ 98 (109)
...+|||++.+. ..+++|..|.+++||+++| |++||+|++||+.++ +.++.++...++... .+.
T Consensus 16 ~~~~lG~~i~~~-------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v-~~~~~~~~~~l~~~~~~v~ 81 (91)
T 2e7k_A 16 AGEHLGVTFRVE-------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPV-GSDPRALQELLRNASGSVI 81 (91)
T ss_dssp TTCCCCEEEEES-------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEEC-TTCHHHHHHHHHTCCSSBC
T ss_pred CCCcEeEEEEec-------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEC-CCCHHHHHHHHHcCCCeEE
Confidence 457899999872 3469999999999999988 999999999999999 788899999998766 888
Q ss_pred EEEEeC
Q psy795 99 LLVARK 104 (109)
Q Consensus 99 l~v~r~ 104 (109)
|++.|.
T Consensus 82 l~v~~~ 87 (91)
T 2e7k_A 82 LKILSG 87 (91)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 888874
No 148
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=2e-14 Score=87.28 Aligned_cols=61 Identities=28% Similarity=0.390 Sum_probs=55.8
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCE
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGV 106 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~ 106 (109)
..+++|..|.+++||+++||++||+|++||+.++.++++.++...++..+ .+.|+|.|.+.
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTCTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCEEEEEEEECCC
Confidence 36799999999999999999999999999999999889999999998877 99999988764
No 149
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4.8e-14 Score=81.83 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=64.1
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHh
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYI 91 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l 91 (109)
.++.+.......+|||.+.+. .+++|..|.+++||+ +||++||+|++||+.++.+.++.++...+
T Consensus 10 ~~v~l~~~~~~~~~G~~l~~~--------------~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~ 74 (96)
T 2edv_A 10 HTVKIDKDTLLQDYGFHISES--------------LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDIL 74 (96)
T ss_dssp EEEEECCCSSSCSCSBCCCSS--------------SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHH
T ss_pred EEEEEEECCCCCcccEEEecC--------------CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 334444444336899988762 347999999999995 88999999999999999998899988888
Q ss_pred cCCC-eEEEEEEeCC
Q psy795 92 KKHP-VLNLLVARKG 105 (109)
Q Consensus 92 ~~~~-~v~l~v~r~~ 105 (109)
+..+ .+.|++.|..
T Consensus 75 ~~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 75 REAEDSLSITVVRCT 89 (96)
T ss_dssp HHCSSCEEEEEEECC
T ss_pred HcCCCeEEEEEEECC
Confidence 8656 8999999976
No 150
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.46 E-value=1.1e-12 Score=84.81 Aligned_cols=90 Identities=16% Similarity=0.232 Sum_probs=71.2
Q ss_pred ceEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHH
Q psy795 10 AMECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAV 88 (109)
Q Consensus 10 ~~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~ 88 (109)
+..++.+..+ ...+|||++.++.+.. .....+++|..|.++|||+++| |++||.|++|||.++.+.++.++.
T Consensus 6 ~~~~v~l~~~-~~~glG~~i~~~~~~~------~~~~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 78 (196)
T 1p1d_A 6 ETTEVVLTAD-PVTGFGIQLQGSVFAT------ETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN 78 (196)
T ss_dssp EEEEEEEECB-TTTBCCCEEEECSSCS------SSCSCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHH
T ss_pred EEEEEEEEeC-CCCccCEEEeCCcCCC------CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 3444444433 2489999999986521 1125679999999999999999 999999999999999987788888
Q ss_pred HHhcCC--C-eEEEEEEeCCE
Q psy795 89 DYIKKH--P-VLNLLVARKGV 106 (109)
Q Consensus 89 ~~l~~~--~-~v~l~v~r~~~ 106 (109)
..++.. + .+.+.+.|.+.
T Consensus 79 ~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 79 QLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp HHHHTCCSSSEEEEEEEECSC
T ss_pred HHHHhCCCCCeEEEEEEecCC
Confidence 888876 4 88999999874
No 151
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.45 E-value=9.8e-13 Score=75.14 Aligned_cols=71 Identities=32% Similarity=0.389 Sum_probs=57.7
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLN 98 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~ 98 (109)
..+|||.+... ..|++|..|.++|||+++||++||.|++||+.++.+.++.++...+... + .+.
T Consensus 16 ~~~lG~~~~~~-------------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~ 82 (90)
T 2eaq_A 16 SLDFGFTIKWD-------------IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLV 82 (90)
T ss_dssp SSCCSEEEEEE-------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEE
T ss_pred CCcccEEEEec-------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEE
Confidence 35789988632 3468999999999999999999999999999999656667777776642 3 889
Q ss_pred EEEEeCC
Q psy795 99 LLVARKG 105 (109)
Q Consensus 99 l~v~r~~ 105 (109)
+++.|++
T Consensus 83 l~v~R~g 89 (90)
T 2eaq_A 83 MDVRRYG 89 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEeCC
Confidence 9999876
No 152
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.45 E-value=1e-13 Score=84.33 Aligned_cols=78 Identities=13% Similarity=0.134 Sum_probs=65.9
Q ss_pred eeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhc
Q psy795 14 LSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIK 92 (109)
Q Consensus 14 ~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~ 92 (109)
+.+.+.+.+.+|||++.+.. .+++|..|.+++||+++| |++||.|++||+.++.+.++.++...++
T Consensus 29 ~~~~l~k~~~glG~~i~~~~-------------~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~ 95 (126)
T 1wif_A 29 IQTKLTVGNLGLGLVVIQNG-------------PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQ 95 (126)
T ss_dssp EEEEEECCTTCCCCCEEEET-------------TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHT
T ss_pred EEEEEecCCceEeEEEEcCC-------------CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHh
Confidence 34455677789999887632 358999999999999999 9999999999999998888899999998
Q ss_pred CC--C-eEEEEEEeC
Q psy795 93 KH--P-VLNLLVARK 104 (109)
Q Consensus 93 ~~--~-~v~l~v~r~ 104 (109)
.. + .+.|+|.|+
T Consensus 96 ~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 96 NITIGTVLQIKAYRG 110 (126)
T ss_dssp SCCSSCEEEEEEESS
T ss_pred cCCCCCEEEEEEEEC
Confidence 73 3 899999886
No 153
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.44 E-value=2.5e-12 Score=73.64 Aligned_cols=60 Identities=25% Similarity=0.383 Sum_probs=51.7
Q ss_pred CEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCEe
Q psy795 48 GIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 48 gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~~ 107 (109)
|++|..|.++|||+++| |++||.|++|||.++.++++.++...+.... .+.+.+.|++..
T Consensus 24 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 24 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDERA 85 (92)
T ss_dssp EEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEC----
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEeCCce
Confidence 47999999999999999 9999999999999999888899888888766 889999988754
No 154
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.43 E-value=1.7e-12 Score=84.03 Aligned_cols=90 Identities=21% Similarity=0.313 Sum_probs=72.6
Q ss_pred EEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 12 ECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 12 ~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
+.+.++..+...+|||.+.++... ......|++|..|.++|+|+++| |++||+|++||+.++.++++.++...
T Consensus 106 ~~~~v~l~~~~~~lG~~l~~g~~~------~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~ 179 (200)
T 2qt5_A 106 RTVEVTLHKEGNTFGFVIRGGAHD------DRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSI 179 (200)
T ss_dssp EEEEEEEECBTTBCSEEEEEECCS------STTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred eEEEEEEecCCCCeEEEEECCCCC------CccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 444555445567899999876542 11224689999999999999999 99999999999999998889999999
Q ss_pred hcCCC-eEEEEEEeCCEe
Q psy795 91 IKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 91 l~~~~-~v~l~v~r~~~~ 107 (109)
++..+ .+.|.+.|++..
T Consensus 180 l~~~~~~v~l~v~R~~~~ 197 (200)
T 2qt5_A 180 LKQCGQEATLLIEYDVSV 197 (200)
T ss_dssp HHTTCSEEEEEEEEEEEC
T ss_pred HHcCCCeEEEEEEECCcc
Confidence 98865 899999997654
No 155
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.40 E-value=7.2e-12 Score=69.92 Aligned_cols=58 Identities=26% Similarity=0.405 Sum_probs=51.0
Q ss_pred CEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCC
Q psy795 48 GIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKG 105 (109)
Q Consensus 48 gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~ 105 (109)
|++|..+.++|||+++| |++||+|++||+.++.++++.++...++... .+.+++.|.+
T Consensus 22 gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~v~l~v~R~g 81 (81)
T 2rcz_A 22 HIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKGKLKMVVQRDE 81 (81)
T ss_dssp EEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTTEEEEEEEC--
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCeEEEEEEeCC
Confidence 47999999999999999 9999999999999999888888888888766 8889888754
No 156
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=99.39 E-value=1.5e-12 Score=76.33 Aligned_cols=77 Identities=23% Similarity=0.276 Sum_probs=61.4
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..+|||.+.+...+.. .......+++|..|.+++||+++||++||+|++||+.++.++++.++...++..+ .+.|+
T Consensus 26 ~~~~G~~l~~~~~~~~---~~~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l~ 102 (104)
T 2z17_A 26 NETFGFEIQSYRPQNQ---NACSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGNLLTIE 102 (104)
T ss_dssp TSCCSEEEEECCCCCC---SSSCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTTEEEEE
T ss_pred CCCccEEEEeeecccC---CcccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCcEEEE
Confidence 3589999998544211 0112356899999999999999999999999999999999888999999888766 66665
Q ss_pred E
Q psy795 101 V 101 (109)
Q Consensus 101 v 101 (109)
|
T Consensus 103 v 103 (104)
T 2z17_A 103 T 103 (104)
T ss_dssp C
T ss_pred E
Confidence 4
No 157
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=99.09 E-value=3.1e-14 Score=84.96 Aligned_cols=72 Identities=28% Similarity=0.456 Sum_probs=60.9
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhh-cCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEE
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASK-SGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLN 98 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~-~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~ 98 (109)
...+|||++.++.+. ..|++|..|.++|||++ +||++||+|++|||.++.+.++.++...++..+ .+.
T Consensus 37 ~~~glG~~l~~g~~~----------~~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~v~ 106 (112)
T 2lob_A 37 DHEGLGISITGGKEH----------GVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIE 106 (112)
Confidence 347999999987663 45789999999999999 889999999999999998888888888887665 666
Q ss_pred EEEE
Q psy795 99 LLVA 102 (109)
Q Consensus 99 l~v~ 102 (109)
|++.
T Consensus 107 l~V~ 110 (112)
T 2lob_A 107 FEVV 110 (112)
Confidence 6654
No 158
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.37 E-value=4.6e-13 Score=79.72 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=59.7
Q ss_pred CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--eE
Q psy795 20 RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP--VL 97 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~--~v 97 (109)
++..+|||.+.+.. +++|..|.+++||+++||++||+|++||+.++..+++.++...++... .+
T Consensus 23 ~~~~~~G~~l~~~~--------------~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v 88 (111)
T 1vae_A 23 VEEGDLGFTLRGNT--------------PVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEV 88 (111)
T ss_dssp CCSSCCSCCEESSS--------------SCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEE
T ss_pred cCCCcccEEEeCCC--------------CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceE
Confidence 44578999886543 368999999999999999999999999999999888899888887655 58
Q ss_pred EEEEEeC
Q psy795 98 NLLVARK 104 (109)
Q Consensus 98 ~l~v~r~ 104 (109)
.|+|.|.
T Consensus 89 ~l~V~~~ 95 (111)
T 1vae_A 89 EMKVVSL 95 (111)
T ss_dssp CEEEECE
T ss_pred EEEEEec
Confidence 8888764
No 159
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.37 E-value=5.6e-12 Score=81.76 Aligned_cols=70 Identities=14% Similarity=0.192 Sum_probs=61.6
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
.+|||++... ..|++|..|.++|+|+++| |++||+|++||+.++.++++.++...++... .+.|+
T Consensus 125 ~~lG~~~~~~-------------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~~~~v~L~ 191 (206)
T 3r0h_A 125 KELGLSLSPN-------------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSME 191 (206)
T ss_dssp CCCCEEEEEC-------------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEE
T ss_pred CccCeEEEcC-------------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEE
Confidence 5789888742 2469999999999999999 9999999999999999999999999998877 88999
Q ss_pred EEeCC
Q psy795 101 VARKG 105 (109)
Q Consensus 101 v~r~~ 105 (109)
|.|..
T Consensus 192 V~R~~ 196 (206)
T 3r0h_A 192 VTRPK 196 (206)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 98854
No 160
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=99.36 E-value=6.2e-12 Score=89.11 Aligned_cols=71 Identities=35% Similarity=0.620 Sum_probs=63.5
Q ss_pred eecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEEE
Q psy795 24 KCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNLL 100 (109)
Q Consensus 24 ~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l~ 100 (109)
+|||++.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.+++..++. .+ .+.|+
T Consensus 20 ~lG~~i~gg~~------------~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~ 87 (391)
T 3tsz_A 20 SVGLRLAGGND------------VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTIL 87 (391)
T ss_dssp SCCEEEEEETT------------TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEE
T ss_pred ceeEEEEecCC------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEE
Confidence 69999988655 47999999999999999999999999999999999999999999884 45 89999
Q ss_pred EEeCCE
Q psy795 101 VARKGV 106 (109)
Q Consensus 101 v~r~~~ 106 (109)
+.|++.
T Consensus 88 v~r~~~ 93 (391)
T 3tsz_A 88 AQKKKD 93 (391)
T ss_dssp EEECHH
T ss_pred EeeCCc
Confidence 998763
No 161
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.35 E-value=2.8e-13 Score=89.17 Aligned_cols=78 Identities=27% Similarity=0.374 Sum_probs=64.6
Q ss_pred cCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-
Q psy795 17 PDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP- 95 (109)
Q Consensus 17 ~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~- 95 (109)
.+.+.+.||||.+.+... ..|++|..|.+++||+++||+.||+|++|||.++.++++.++...+...+
T Consensus 14 ~l~k~~~glG~~l~~~~~-----------~~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~g~ 82 (216)
T 2krg_A 14 TMKKGPSGYGFNLHSDKS-----------KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGD 82 (216)
T ss_dssp EEECCSSSSCEEECCCSS-----------SCSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHHCS
T ss_pred EEEeCCCCceEEEEecCC-----------CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 334555799999987665 45789999999999999999999999999999999778888888877645
Q ss_pred eE-EEEEEeCC
Q psy795 96 VL-NLLVARKG 105 (109)
Q Consensus 96 ~v-~l~v~r~~ 105 (109)
.+ .+++.|.+
T Consensus 83 ~v~~l~V~R~g 93 (216)
T 2krg_A 83 ETKLLVVDRET 93 (216)
T ss_dssp EEEEEECCHHH
T ss_pred eEEEEEEEECC
Confidence 77 78777654
No 162
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=99.34 E-value=6e-12 Score=90.82 Aligned_cols=72 Identities=35% Similarity=0.593 Sum_probs=64.6
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNL 99 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l 99 (109)
.+|||.+.++.+ .|++|..|.++|||+++||++||+|++|||.++.++++.+++..++. .+ .+.|
T Consensus 11 ~~lG~~i~gg~~------------~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L 78 (468)
T 3shw_A 11 DSVGLRLAGGND------------VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTI 78 (468)
T ss_dssp SSCCEEEEEETT------------TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEE
T ss_pred CccceEEEccCc------------CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEE
Confidence 689999988755 47999999999999999999999999999999999999999999886 45 8999
Q ss_pred EEEeCCE
Q psy795 100 LVARKGV 106 (109)
Q Consensus 100 ~v~r~~~ 106 (109)
++.|++.
T Consensus 79 ~V~r~g~ 85 (468)
T 3shw_A 79 LAQKKKD 85 (468)
T ss_dssp EEEECHH
T ss_pred EEEECCc
Confidence 9998753
No 163
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.33 E-value=1.1e-11 Score=72.33 Aligned_cols=69 Identities=25% Similarity=0.243 Sum_probs=56.4
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC---CC-eE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK---HP-VL 97 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~---~~-~v 97 (109)
..++||.+.... .+.+|..|.++|||+++||++||+|++|||.++...+++++...+.. .+ .+
T Consensus 27 ~~g~G~~l~~~~-------------~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v 93 (101)
T 3qik_A 27 EEDYGFDIEEKN-------------KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPL 93 (101)
T ss_dssp SSSSSEEEEEET-------------TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred CCcccEEEEccC-------------CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeE
Confidence 468899886532 34789999999999999999999999999999976677888777765 34 78
Q ss_pred EEEEEe
Q psy795 98 NLLVAR 103 (109)
Q Consensus 98 ~l~v~r 103 (109)
.|+|..
T Consensus 94 ~LLV~~ 99 (101)
T 3qik_A 94 RLLVAT 99 (101)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 887764
No 164
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.31 E-value=6.3e-12 Score=75.51 Aligned_cols=63 Identities=27% Similarity=0.394 Sum_probs=55.6
Q ss_pred CCCEEEEEECC--CChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYD--ESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~--gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.+ ++||+++||++||+|++||+.++.++++.++...+...+ .+.+++.|++...
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQTSQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCCSSCEEEEEEECSSCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhCCCEEEEEEEECCEEE
Confidence 46899999999 999999999999999999999999888888888877656 8899999987643
No 165
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.29 E-value=3.5e-11 Score=75.84 Aligned_cols=80 Identities=28% Similarity=0.323 Sum_probs=60.7
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
.+.+.+.... ..+|||.+.... .|++|..|.++|||+++||++||+|++|||.++.++++......
T Consensus 5 ~r~v~l~k~~-~~~lG~~~~~~~-------------~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 70 (166)
T 1w9e_A 5 PREVILCKDQ-DGKIGLRLKSID-------------NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKV 70 (166)
T ss_dssp CEEEEEECCT-TSCCSEEEEEET-------------TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CEEEEEEeCC-CCcEeEEEEeCC-------------CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 3444554433 468999987632 46899999999999999999999999999999999887445555
Q ss_pred hcCC-C-eEEEEEEeC
Q psy795 91 IKKH-P-VLNLLVARK 104 (109)
Q Consensus 91 l~~~-~-~v~l~v~r~ 104 (109)
++.. + .+.++++|.
T Consensus 71 ~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 71 LKQAFGEKITMTIRDR 86 (166)
T ss_dssp HHHCCSSEEEEEEECC
T ss_pred HhcCCCCEEEEEEEcC
Confidence 5433 3 888888554
No 166
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.24 E-value=4.7e-11 Score=90.09 Aligned_cols=75 Identities=33% Similarity=0.529 Sum_probs=65.9
Q ss_pred CCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eE
Q psy795 20 RRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VL 97 (109)
Q Consensus 20 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v 97 (109)
+...+|||++.++.+ ..|++|..|.++|+|+++| |++||+|++||+.++.++++.++...++..+ .+
T Consensus 315 ~~~~~lG~~i~~~~~-----------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v 383 (721)
T 2xkx_A 315 RGSTGLGFNIVGGED-----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTV 383 (721)
T ss_pred ECCCCccEEEeccCC-----------CCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhcCCeE
Confidence 344689999987655 4689999999999999999 9999999999999999999999999998877 88
Q ss_pred EEEEEeCC
Q psy795 98 NLLVARKG 105 (109)
Q Consensus 98 ~l~v~r~~ 105 (109)
.|.+.|+.
T Consensus 384 ~L~v~r~~ 391 (721)
T 2xkx_A 384 TIIAQYKP 391 (721)
T ss_pred EEEEEeCc
Confidence 88888764
No 167
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.23 E-value=1.7e-10 Score=74.39 Aligned_cols=76 Identities=16% Similarity=0.343 Sum_probs=63.9
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNL 99 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l 99 (109)
...|||.+....+. ....|++|..|.++|||+++| |++||.|++||+.++.++++.++...++..+ .+.|
T Consensus 118 ~~~lG~~~~~~~~~--------~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~~v~l 189 (196)
T 1p1d_A 118 SVELGITISSPSSR--------KPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKL 189 (196)
T ss_dssp SCCCCCEEECSCSS--------STTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHCTTCEEE
T ss_pred CCCcCEEEECCCCC--------CCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCEEEE
Confidence 45789988775442 114679999999999999999 9999999999999999877888888887766 8999
Q ss_pred EEEeCC
Q psy795 100 LVARKG 105 (109)
Q Consensus 100 ~v~r~~ 105 (109)
.+.|++
T Consensus 190 ~v~R~~ 195 (196)
T 1p1d_A 190 KIRKDE 195 (196)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999875
No 168
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.18 E-value=3.4e-11 Score=85.23 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=67.6
Q ss_pred eEEeeecCCCCcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcC-CCCCCEEEEECCEEeccccHHHHHH
Q psy795 11 MECLSPPDGRRVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSG-LRMHDKILQCNGYDFTMVTHKKAVD 89 (109)
Q Consensus 11 ~~~~~~~~~~~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~G-l~~gD~i~~vn~~~i~~~~~~~~~~ 89 (109)
.+.+.+.... ..+|||.+.+... .....+++|..|.++|||+++| |++||+|++|||.++.++++.++..
T Consensus 205 ~~~V~i~k~~-ge~lG~~i~~~~~--------g~~~~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~ 275 (388)
T 3suz_A 205 CKELQLEKHK-GEILGVVVVESGW--------GSILPTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQG 275 (388)
T ss_dssp CEEEEECCCS-SCCCCCCCBCC-----------CCSCCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHH
T ss_pred ceEEEEECCC-CCceeEEEEecCC--------CCcCCCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHH
Confidence 4455555443 4689999887432 1123468999999999999999 9999999999999999998888888
Q ss_pred HhcCCC---eEEEEEEeCCE
Q psy795 90 YIKKHP---VLNLLVARKGV 106 (109)
Q Consensus 90 ~l~~~~---~v~l~v~r~~~ 106 (109)
.++... .+.|++.|.+.
T Consensus 276 ~l~~~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 276 IIKGLKNQTQVKLNIVSCPP 295 (388)
T ss_dssp HTTTCTTCSCEEEEEEECCS
T ss_pred HHHhccCCCccccccccccc
Confidence 887753 68999988764
No 169
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.16 E-value=2.5e-10 Score=67.67 Aligned_cols=60 Identities=23% Similarity=0.337 Sum_probs=50.9
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCCeEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHPVLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....+.....+.+++.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRTQSQLAVQIRRGRET 93 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHHCSSEEEEEEETTEE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECCEE
Confidence 5789999999999999999999999999999999754 55666666544888999998864
No 170
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.12 E-value=4.1e-10 Score=65.54 Aligned_cols=60 Identities=25% Similarity=0.419 Sum_probs=49.0
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+. ||++||.|++||+.++.++ .+....+... + .+.+++.|+++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSS--QEFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSH--HHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 57899999999999996 9999999999999999865 4445555442 3 8899999988653
No 171
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.12 E-value=4.8e-10 Score=66.34 Aligned_cols=60 Identities=28% Similarity=0.390 Sum_probs=50.1
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCCeEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHPVLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....+.....+.+.+.|++..
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS--SELQEAVLTESPLLLEVRRGNDD 93 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHHHCSSEEEEEEETTEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECCEE
Confidence 5689999999999999999999999999999999765 45555554434888999998764
No 172
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.10 E-value=6.1e-10 Score=68.09 Aligned_cols=60 Identities=18% Similarity=0.276 Sum_probs=49.1
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+ +||++||.|++|||.++.++ .+....+... + .+.+++.|+++..
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 118 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASS--TDLQSALYNHSIGDTIKITYYRNGKEE 118 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCH--HHHHHHHHHSSTTCEEEEEEEETTEEE
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 4789999999999999 99999999999999999876 3444444432 3 8999999988653
No 173
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.10 E-value=3.6e-11 Score=69.06 Aligned_cols=58 Identities=28% Similarity=0.547 Sum_probs=48.8
Q ss_pred CEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 48 GIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 48 gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
|++|..|.++|||++ ||++||.|++||+.++.++ .++...+... + .+.+++.|+++..
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 62 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSA--EKLIDYISSKKAGDKVTLKIEREEKEK 62 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSH--HHHHHHHSSCCSSCEECEEEESSSCEE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCH--HHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 578899999999999 9999999999999999865 5666777665 3 8999999988653
No 174
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=99.09 E-value=1.7e-09 Score=76.42 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=63.4
Q ss_pred CCCcceecEEEecc-cCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--
Q psy795 19 GRRVLKCGFKIGGG-IDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-- 95 (109)
Q Consensus 19 ~~~~~~lG~~i~g~-~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-- 95 (109)
.....|+|+.+... .. ..+++|..|.++|||+++||++||+|++|||.++.+++..++...++...
T Consensus 81 ~g~~~giG~~~~~~~~~-----------~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~ 149 (388)
T 1fc6_A 81 AGSVTGVGLEITYDGGS-----------GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADS 149 (388)
T ss_dssp SSSCBBCSEEEEECTTC-----------SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTC
T ss_pred cCceEEEEEEEEEeecC-----------CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCC
Confidence 34467899988653 21 35689999999999999999999999999999999987777777777543
Q ss_pred eEEEEEEeCCE
Q psy795 96 VLNLLVARKGV 106 (109)
Q Consensus 96 ~v~l~v~r~~~ 106 (109)
.+.+++.|.+.
T Consensus 150 ~v~l~v~r~g~ 160 (388)
T 1fc6_A 150 QVEVVLHAPGA 160 (388)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEEEEeCCC
Confidence 89999999876
No 175
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.08 E-value=3.2e-10 Score=64.38 Aligned_cols=60 Identities=23% Similarity=0.217 Sum_probs=47.0
Q ss_pred CCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhc---CCCeEEEEEEeCCEec
Q psy795 47 NGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIK---KHPVLNLLVARKGVTS 108 (109)
Q Consensus 47 ~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~---~~~~v~l~v~r~~~~~ 108 (109)
.|+.|..+.++|+|+++||++||.|++||+.++.++. +....+. ....+.+.+.|+++..
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~--d~~~~~~~~~~g~~v~l~v~R~g~~~ 81 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPN--VMNTLFQSMNEMTEMSLTVERDGQQH 81 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHH--HHHHHHHTGGGCSEEEEEEEETTEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHH--HHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 3677888889999999999999999999999998763 3333333 3338899999988653
No 176
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.06 E-value=2.8e-10 Score=65.57 Aligned_cols=60 Identities=22% Similarity=0.398 Sum_probs=49.0
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||++ ||++||.|++|||.++.++ .+....+... + .+.+.+.|+++..
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 66 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTS--EQIVSYVREKQAGDRVRVTFIRDRKQH 66 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCH--HHHHHHHHHSCTTCCEEEEEEETTEEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCH--HHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 46799999999999999 9999999999999999765 4445555443 3 8999999988653
No 177
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.03 E-value=5.3e-10 Score=63.73 Aligned_cols=57 Identities=26% Similarity=0.353 Sum_probs=46.6
Q ss_pred EEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC-C-eEEEEEEeCCEe
Q psy795 49 IYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH-P-VLNLLVARKGVT 107 (109)
Q Consensus 49 i~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~-~-~v~l~v~r~~~~ 107 (109)
++|..+.++|||+++||++||.|++||+.++.++ .+....+... + .+.+.+.|+++.
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQW--VTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCH--HHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCH--HHHHHHHhcCCCCeEEEEEEECCeE
Confidence 5788999999999999999999999999999865 4555555433 3 888999998864
No 178
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.02 E-value=6.7e-10 Score=72.50 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=46.9
Q ss_pred CCCEEEEEECCCChhhhcCCCCC-CEEEEECCEEeccccHHHH-HHHhcCCCeEEEEEEeCC
Q psy795 46 DNGIYVTEVYDESPASKSGLRMH-DKILQCNGYDFTMVTHKKA-VDYIKKHPVLNLLVARKG 105 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~g-D~i~~vn~~~i~~~~~~~~-~~~l~~~~~v~l~v~r~~ 105 (109)
..|++|..|.++|||+++||++| |+|++||+.++.++..... +........+.+.+.|.+
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~ 76 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSK 76 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETT
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecC
Confidence 67899999999999999999999 9999999999987654322 222222228899998864
No 179
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.99 E-value=2.4e-09 Score=62.76 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=47.4
Q ss_pred CCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccH-HHHHHHhcCCCeEEEEEEeCCEec
Q psy795 47 NGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTH-KKAVDYIKKHPVLNLLVARKGVTS 108 (109)
Q Consensus 47 ~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~-~~~~~~l~~~~~v~l~v~r~~~~~ 108 (109)
.|+.|....|+|+|+++||++||.|++|||.++.++.. ...+..+.....+.+.+.|++...
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~ 99 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 99 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEE
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEE
Confidence 35678888888899999999999999999999987743 233333333348899999988653
No 180
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.98 E-value=3.1e-09 Score=61.29 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=44.4
Q ss_pred EEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--C-CeEEEEEEeCC
Q psy795 50 YVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--H-PVLNLLVARKG 105 (109)
Q Consensus 50 ~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~-~~v~l~v~r~~ 105 (109)
+|..|.++|||+++||++||+|++||+.++.++ .++...+.. . ..+.+.+.|++
T Consensus 5 ~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~--~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAPGTELKAVDGIETPDW--DAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp BEEEECTTSHHHHTTCCTTCEEEEETTEECSSH--HHHHHHHHHTTTCSEEEEEEECTT
T ss_pred EEEeeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHHhcCCCcEEEEEEECC
Confidence 689999999999999999999999999999876 444444432 2 27899999986
No 181
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.98 E-value=2e-09 Score=77.53 Aligned_cols=60 Identities=28% Similarity=0.348 Sum_probs=49.8
Q ss_pred CCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEEEEEeCCEec
Q psy795 47 NGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNLLVARKGVTS 108 (109)
Q Consensus 47 ~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l~v~r~~~~~ 108 (109)
.|++|..|.++|||+++||+.||+|++|||.++.++. +....+.. .+ .+.+++.|+++..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~--~l~~~l~~~~~g~~v~l~V~R~g~~~ 344 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQAT--QVKTTISLLRVGSTVKIIVERDNKPL 344 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHH--HHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHH--HHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 7899999999999999999999999999999998763 33444432 33 8999999998754
No 182
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.98 E-value=3.6e-09 Score=78.52 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=55.6
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCCeEEEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHPVLNLLVA 102 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~~v~l~v~ 102 (109)
.++|+.+... ..|++|..|.++|||+++||++||+|++|||.++...+..+++...+....+.++|.
T Consensus 485 ~~lG~~~~~~-------------~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v~~~~l~~~l~~~~~g~~v~l~v~ 551 (597)
T 4fgm_A 485 VNFGAKYKAS-------------PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQATEQSVKRILERYIPGDTVTIHAF 551 (597)
T ss_dssp CCCSEEEEEE-------------TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCTTTHHHHHTTCCTTCEEEEEEE
T ss_pred cccceEEecc-------------CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEECCHHHHHHHHHhcCCCCEEEEEEE
Confidence 4677776432 236899999999999999999999999999999964444444443333239999999
Q ss_pred eCCEec
Q psy795 103 RKGVTS 108 (109)
Q Consensus 103 r~~~~~ 108 (109)
|+++..
T Consensus 552 R~g~~~ 557 (597)
T 4fgm_A 552 RRDELM 557 (597)
T ss_dssp ETTEEE
T ss_pred ECCEEE
Confidence 998754
No 183
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=98.97 E-value=4.5e-09 Score=72.51 Aligned_cols=72 Identities=14% Similarity=0.189 Sum_probs=55.6
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNL 99 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l 99 (109)
..||+.+..... ..|++|..|.++|||+++||++||+|++|||.++.++ .+....+.. .+ .+.+
T Consensus 229 ~~lGi~~~~~~~-----------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l 295 (324)
T 1y8t_A 229 ASLGVQVTNDKD-----------TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSA--DALVAAVRSKAPGATVAL 295 (324)
T ss_dssp EECCEEEESCSS-----------SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSH--HHHHHHHHTSCTTCEEEE
T ss_pred cccceEeeeccC-----------CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEE
Confidence 466776643222 4679999999999999999999999999999999876 344455543 23 8999
Q ss_pred EEEe-CCEe
Q psy795 100 LVAR-KGVT 107 (109)
Q Consensus 100 ~v~r-~~~~ 107 (109)
++.| +++.
T Consensus 296 ~v~R~~g~~ 304 (324)
T 1y8t_A 296 TFQDPSGGS 304 (324)
T ss_dssp EEECSSCCE
T ss_pred EEEECCCCE
Confidence 9999 7754
No 184
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.97 E-value=5.3e-09 Score=72.06 Aligned_cols=83 Identities=18% Similarity=0.175 Sum_probs=60.6
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNL 99 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l 99 (109)
..+|+.+....+...+... .....|++|..|.++|||+++||++||.|++|||.++.++ .+....+.. .+ .+.|
T Consensus 221 ~~lGi~~~~~~~~~~~~~g-~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~--~~l~~~l~~~~~g~~v~l 297 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGG-IDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISA--LETMDQVAEIRPGSVIPV 297 (318)
T ss_dssp EECCEEEEECSCCCSSSSC-SSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCH--HHHHHHHHTSCTTCEEEE
T ss_pred ccceeEeeecchhHHHhcc-CCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEE
Confidence 4577777665443222211 1235789999999999999999999999999999999865 455555554 23 8999
Q ss_pred EEEeCCEec
Q psy795 100 LVARKGVTS 108 (109)
Q Consensus 100 ~v~r~~~~~ 108 (109)
++.|+++..
T Consensus 298 ~v~R~g~~~ 306 (318)
T 1te0_A 298 VVMRDDKQL 306 (318)
T ss_dssp EEESSSCEE
T ss_pred EEEECCEEE
Confidence 999988643
No 185
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.94 E-value=4.1e-09 Score=73.51 Aligned_cols=61 Identities=25% Similarity=0.324 Sum_probs=51.2
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++||++||.|++|||.++.++ .+....+... + .+.|++.|+++..
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSF--AELRSRIATTEPGTKVKLGLLRNGKPL 325 (345)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCH--HHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 5789999999999999999999999999999999865 4555555442 3 8999999998754
No 186
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.94 E-value=6.3e-09 Score=71.93 Aligned_cols=61 Identities=23% Similarity=0.320 Sum_probs=52.5
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCCeEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHPVLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....++....+.|.+.|+++..
T Consensus 255 ~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~--~~l~~~l~~~~~v~l~v~R~g~~~ 315 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA--EDVYEAVRTQSQLAVQIRRGRETL 315 (325)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHHTTCSSEEEEEEETTEEE
T ss_pred CCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCH--HHHHHHHhCCCeEEEEEEECCEEE
Confidence 4689999999999999999999999999999999865 566677766458899999998653
No 187
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.86 E-value=1.3e-08 Score=73.01 Aligned_cols=61 Identities=25% Similarity=0.321 Sum_probs=49.7
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++||+.||+|++|||.++.++.. ....+.. .+ .+.+++.|+++..
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~--l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE--LRSRIATTEPGTKVKLGLLRNGKPL 325 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH--HHHHHHhcCCCCEEEEEEEECCEEE
Confidence 478999999999999999999999999999999987643 3333332 23 8999999988653
No 188
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.84 E-value=1.7e-08 Score=72.38 Aligned_cols=60 Identities=25% Similarity=0.437 Sum_probs=52.8
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||+|++||+.++.++ .+....++... .+.|.+.|++..
T Consensus 362 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~ 422 (436)
T 4a8c_A 362 GKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSI--AEMRKVLAAKPAIIALQIVRGNES 422 (436)
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHhCCCeEEEEEEECCEE
Confidence 4689999999999999999999999999999999865 67777777766 899999998865
No 189
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.80 E-value=1.3e-08 Score=72.38 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=55.4
Q ss_pred cceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEE
Q psy795 22 VLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLL 100 (109)
Q Consensus 22 ~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~ 100 (109)
..|+||.+...... ...-.++|..|.++|||+++||++||+|++|||.++..++ ....++..+ .+.+.
T Consensus 73 ~~G~~~~l~~~~~~--------~~~~~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~---~~~~l~~~g~~v~l~ 141 (403)
T 3k50_A 73 SYGFDYTLYKVLDN--------DTAYNALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV---ESELLQGSTRQLQIG 141 (403)
T ss_dssp BCSEEEEEEECTTC--------SSCEEEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT---GGGGTSCSCEEEEEE
T ss_pred ccceEEEEEEcCCC--------CcceeEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh---HHHHhhCCCCEEEEE
Confidence 56777776543321 0011378999999999999999999999999999998775 345565544 88999
Q ss_pred EEeCCE
Q psy795 101 VARKGV 106 (109)
Q Consensus 101 v~r~~~ 106 (109)
+.|.++
T Consensus 142 v~R~g~ 147 (403)
T 3k50_A 142 VYKEVV 147 (403)
T ss_dssp EEEEEC
T ss_pred EEeCCc
Confidence 988754
No 190
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.80 E-value=2.3e-08 Score=71.95 Aligned_cols=60 Identities=23% Similarity=0.207 Sum_probs=52.7
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....++..+ .+.|.+.|++..
T Consensus 385 ~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~--~~~~~~l~~~~~~v~l~v~R~g~~ 445 (451)
T 3pv2_A 385 VIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDV--KSLQTIAQEKKKELLVQVLRGPGS 445 (451)
T ss_dssp EEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH--HHHHHHTTSSCSCEEEEEEETTEE
T ss_pred CCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHhcCCCeEEEEEEECCEE
Confidence 3589999999999999999999999999999999865 66777777766 899999998865
No 191
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.80 E-value=2.7e-08 Score=60.13 Aligned_cols=57 Identities=26% Similarity=0.291 Sum_probs=46.7
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEEEEEeCCE
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNLLVARKGV 106 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l~v~r~~~ 106 (109)
..|++|..|.+++||+++ |++||.|++||+.++.++ .+....+.. .+ .+.+.+ |+++
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~--~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNL--TTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSH--HHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 568999999999999999 999999999999999876 455555553 23 888888 7664
No 192
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=98.77 E-value=1.4e-08 Score=70.75 Aligned_cols=61 Identities=21% Similarity=0.257 Sum_probs=51.0
Q ss_pred CCCEEEEEECCCChhhhcCCCC-----------CCEEEEECCEEeccccHHHHHHHhcCC--C-eEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRM-----------HDKILQCNGYDFTMVTHKKAVDYIKKH--P-VLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~-----------gD~i~~vn~~~i~~~~~~~~~~~l~~~--~-~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++||++ ||.|++|||.++.++ .+....+... + .+.+++.|+++..
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~R~g~~~ 324 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNG--SDLYRILDQCKVGDEVTVEVLRGDHKE 324 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSS--HHHHHHHTTCCTTCEEEEEEECSSSEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCH--HHHHHHHHhCCCcCEEEEEEEECCEEE
Confidence 3799999999999999999999 999999999999876 4555666432 3 8999999988653
No 193
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.72 E-value=2.3e-08 Score=65.17 Aligned_cols=74 Identities=23% Similarity=0.144 Sum_probs=52.8
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCC-CCEEEEECCEEeccc-cHHHHHHHhcCCCeEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRM-HDKILQCNGYDFTMV-THKKAVDYIKKHPVLNLL 100 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~-gD~i~~vn~~~i~~~-~~~~~~~~l~~~~~v~l~ 100 (109)
..+|+++....+.. ....|++|..|.++|||+++||++ ||.|++||+. +.++ +....+... ....+.+.
T Consensus 95 ~~lGi~~~~~~~~~-------~~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~-~g~~v~l~ 165 (209)
T 3rle_A 95 GLLGVSIRFCSFDG-------ANENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETH-EAKPLKLY 165 (209)
T ss_dssp SSSCEEEEEEECTT-------GGGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHT-TTSCEEEE
T ss_pred CccceEEeecChhH-------ccccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhC-CCCeEEEE
Confidence 46788776544321 113689999999999999999999 9999999997 7544 333333332 22288899
Q ss_pred EEeCC
Q psy795 101 VARKG 105 (109)
Q Consensus 101 v~r~~ 105 (109)
+.|++
T Consensus 166 v~r~~ 170 (209)
T 3rle_A 166 VYNTD 170 (209)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 98864
No 194
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.63 E-value=3.6e-09 Score=74.87 Aligned_cols=54 Identities=17% Similarity=0.333 Sum_probs=0.0
Q ss_pred EEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEe
Q psy795 50 YVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVAR 103 (109)
Q Consensus 50 ~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r 103 (109)
+|..|.++|+|+++||++||+|++|||.++.++++.+++..++..+ .+.|++..
T Consensus 318 ~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~~~~v~L~V~p 372 (388)
T 3suz_A 318 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHMKTMP 372 (388)
T ss_dssp -------------------------------------------------------
T ss_pred EEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEEe
Confidence 7889999999999999999999999999999888999999998877 77777643
No 195
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=98.60 E-value=4.9e-09 Score=72.62 Aligned_cols=61 Identities=31% Similarity=0.508 Sum_probs=0.0
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCCeEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHPVLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....++....+.+++.|+++..
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~--~~~~~~l~~~~~v~l~v~R~g~~~ 313 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSA--NDVSDVIKRESTLNMVVRRGNEDI 313 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCH--HHHHHHHhCCCeEEEEEEECCEEE
Confidence 4689999999999999999999999999999999755 445555655338889999987653
No 196
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.51 E-value=2.6e-07 Score=67.85 Aligned_cols=62 Identities=19% Similarity=0.214 Sum_probs=48.8
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEecccc-----------HHHHHHHhcCCCeEEEEEEeCCEec
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVT-----------HKKAVDYIKKHPVLNLLVARKGVTS 108 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~-----------~~~~~~~l~~~~~v~l~v~r~~~~~ 108 (109)
..|++|..|.++|||+++ |+.||.|+++||.++.... ....+...+....+.+++.|+|+..
T Consensus 276 ~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 579999999999999876 9999999999999995421 2334444333339999999999765
No 197
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.49 E-value=1.4e-08 Score=72.99 Aligned_cols=60 Identities=28% Similarity=0.435 Sum_probs=0.0
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||.|++||+.++.++ .+....++... .+.|.+.|++..
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~--~~l~~~l~~~~~~v~l~v~R~g~~ 442 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNI--AELRKVLDSKPSVLALNIQRGDST 442 (448)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCH--HHHHHHHHcCCCeEEEEEEECCEE
Confidence 4678999999999999999999999999999999754 56666666655 888889998754
No 198
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.47 E-value=6.5e-07 Score=56.10 Aligned_cols=53 Identities=19% Similarity=0.354 Sum_probs=44.3
Q ss_pred EEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC-eEEEEEE
Q psy795 50 YVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP-VLNLLVA 102 (109)
Q Consensus 50 ~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~-~v~l~v~ 102 (109)
+|..+.++|||+++||++||.|++||+.++.++.+..+...+...+ .+.+.+.
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 7899999999999999999999999999999988887666655555 5555543
No 199
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.44 E-value=7e-08 Score=69.42 Aligned_cols=60 Identities=25% Similarity=0.343 Sum_probs=49.8
Q ss_pred CCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcC--CC-eEEEEEEeCCEe
Q psy795 46 DNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKK--HP-VLNLLVARKGVT 107 (109)
Q Consensus 46 ~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~--~~-~v~l~v~r~~~~ 107 (109)
..|++|..|.++|||+++||++||.|++|||.++.++ .+....+.. .+ .+.+++.|+++.
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 347 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF--AALRAQVGTMPVGSKLTLGLLRDGKQ 347 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS--HHHHHHTTSSBTTCCCEEEEESSSCE
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH--HHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 3689999999999999999999999999999999877 445555553 23 888999998754
No 200
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.24 E-value=5.3e-06 Score=64.38 Aligned_cols=69 Identities=14% Similarity=0.135 Sum_probs=54.4
Q ss_pred CcceecEEEecccCCCCCCCCCCCCCCCEEEEEECCC--------ChhhhcC--CCCCCEEEEECCEEeccccHHHHHHH
Q psy795 21 RVLKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDE--------SPASKSG--LRMHDKILQCNGYDFTMVTHKKAVDY 90 (109)
Q Consensus 21 ~~~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~g--------s~a~~~G--l~~gD~i~~vn~~~i~~~~~~~~~~~ 90 (109)
...++|+.+.-. ..+++|..+.++ |||+++| |+ ||+|++|||.++..+. +...+
T Consensus 735 ~~~g~G~~~~~~-------------~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~--~~~~~ 798 (1045)
T 1k32_A 735 RSGRIACDFKLD-------------GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGS--NIYRV 798 (1045)
T ss_dssp CCCBCSEEEEEE-------------TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTB--CHHHH
T ss_pred ccceecEEEEEe-------------CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchh--hHHHh
Confidence 346888877542 245899999998 9999999 99 9999999999998764 44555
Q ss_pred hcCCC--eEEEEEEeCC
Q psy795 91 IKKHP--VLNLLVARKG 105 (109)
Q Consensus 91 l~~~~--~v~l~v~r~~ 105 (109)
++... .+.|++.|.+
T Consensus 799 ~~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 799 LSEKAGTSARIRLSGKG 815 (1045)
T ss_dssp HHTTTTSEEEEEEECSS
T ss_pred hcCCCCCEEEEEEECCC
Confidence 65543 8999999876
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.72 E-value=0.00015 Score=53.41 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=47.0
Q ss_pred CCCCEEEEEECCCChhhhcCCCCCCEEEEECCEEeccccHHHHHHHhcCCC--eEEEEE
Q psy795 45 TDNGIYVTEVYDESPASKSGLRMHDKILQCNGYDFTMVTHKKAVDYIKKHP--VLNLLV 101 (109)
Q Consensus 45 ~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~~~~~~~~~~l~~~~--~v~l~v 101 (109)
..++++|+.|.+++++...|++.||+|++||+.++.+. .+..+.++.+. .+.+.+
T Consensus 413 ~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~--~~l~~~l~~~k~~~l~~~~ 469 (539)
T 4fln_A 413 GEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNI--HHLAHLIDMCKDKYLVFEF 469 (539)
T ss_dssp TCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSH--HHHHHHHHTCCSSEEEEEE
T ss_pred CceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCH--HHHHHHHHHcCCCeEEEEE
Confidence 46789999999999999999999999999999999976 56677787776 555554
No 202
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=68.52 E-value=8.7 Score=28.71 Aligned_cols=29 Identities=21% Similarity=0.432 Sum_probs=21.5
Q ss_pred EEEEEECCCChhhhcCCCCCCEEEEECCEEecc
Q psy795 49 IYVTEVYDESPASKSGLRMHDKILQCNGYDFTM 81 (109)
Q Consensus 49 i~V~~v~~gs~a~~~Gl~~gD~i~~vn~~~i~~ 81 (109)
++|..+..... ++..||+|++|||+++..
T Consensus 98 i~V~dv~~~~s----~I~vGdEIlsING~pv~e 126 (583)
T 3dor_A 98 FYFVDIMTFSS----EIRVGDELLEVDGAPVQD 126 (583)
T ss_dssp EEEEEECSSCC----SSCTTCEEEEETTEEHHH
T ss_pred EEEEecccccc----CCCCCCEEEEECCccHHH
Confidence 67766533222 699999999999999854
No 203
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=38.99 E-value=42 Score=19.93 Aligned_cols=24 Identities=21% Similarity=0.319 Sum_probs=17.9
Q ss_pred CEEEEEECCCChhhhcCCCCCCEEE
Q psy795 48 GIYVTEVYDESPASKSGLRMHDKIL 72 (109)
Q Consensus 48 gi~V~~v~~gs~a~~~Gl~~gD~i~ 72 (109)
.-+|.++- .+-+++.||++||+|.
T Consensus 102 a~~VLEl~-aG~~~~~gi~~Gd~v~ 125 (136)
T 3pjy_A 102 VAYVLELN-AGTVKRLGVSPGDRLE 125 (136)
T ss_dssp EEEEEEEE-TTHHHHHTCCTTCEEE
T ss_pred eeEEEEeC-cChHHhcCCCCCCEEE
Confidence 34788874 4566777999999985
No 204
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=28.26 E-value=41 Score=21.84 Aligned_cols=22 Identities=27% Similarity=0.508 Sum_probs=18.8
Q ss_pred hhcCCCCCCEEEEECCEEeccc
Q psy795 61 SKSGLRMHDKILQCNGYDFTMV 82 (109)
Q Consensus 61 ~~~Gl~~gD~i~~vn~~~i~~~ 82 (109)
.+.|+..|..++++||.++.+.
T Consensus 53 ~~d~~~~~~~~~~~ng~~~~~~ 74 (219)
T 2j3t_D 53 QRDGIRVGHAVLAINGMDVNGR 74 (219)
T ss_dssp CCTTCCTTCEEEEETTEECBTT
T ss_pred ccCCccccceeeecCCccCCCc
Confidence 4468999999999999999753
No 205
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=25.17 E-value=72 Score=18.72 Aligned_cols=40 Identities=25% Similarity=0.210 Sum_probs=23.9
Q ss_pred ceecEEEecccCCCCCCCCCCCCCCCEEEEEECCCChhhhcCCCCCCEEEE
Q psy795 23 LKCGFKIGGGIDQDYKKSPQGYTDNGIYVTEVYDESPASKSGLRMHDKILQ 73 (109)
Q Consensus 23 ~~lG~~i~g~~~~~~~~~~~~~~~~gi~V~~v~~gs~a~~~Gl~~gD~i~~ 73 (109)
.|+||-....... .++..-+||+ .+--.+.+|+.||.|..
T Consensus 60 dG~GFlr~~~~~y-------~~~~~DiyVs----~~~irrf~lr~GD~V~g 99 (130)
T 1a62_A 60 DGFGFLRSADSSY-------LAGPDDIYVS----PSQIRRFNLRTGDTISG 99 (130)
T ss_dssp TSCEEEECGGGTT-------CCCTTCEEEC----HHHHHHTTCCTTCEEEE
T ss_pred CCeEEEecCCcCC-------CCCCCCEEEC----HHHHhHhCCCCCCEEEE
Confidence 4788877653111 1113447863 24455568999999964
No 206
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=22.60 E-value=41 Score=16.90 Aligned_cols=19 Identities=16% Similarity=0.109 Sum_probs=15.3
Q ss_pred ECCCChhhhcCCCCCCEEE
Q psy795 54 VYDESPASKSGLRMHDKIL 72 (109)
Q Consensus 54 v~~gs~a~~~Gl~~gD~i~ 72 (109)
+.|.....+.||.+||.+.
T Consensus 25 tIPkeiR~~Lgi~~Gd~l~ 43 (59)
T 1yfb_A 25 VIPIELRRTLGIAEKDALE 43 (59)
T ss_dssp ECCHHHHHHTTCCTTCEEE
T ss_pred EeCHHHHHHcCCCCCCEEE
Confidence 3676777888999999985
No 207
>3jxo_A TRKA-N domain protein; TRKA K+ channel component, structural genomics, PSI-2-2, Pro structure initiative, joint center for structural genomics; 1.55A {Thermotoga SP}
Probab=21.68 E-value=96 Score=15.98 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=16.6
Q ss_pred CEEEEEECCCC----hhhhcCCCCCCEEEEE
Q psy795 48 GIYVTEVYDES----PASKSGLRMHDKILQC 74 (109)
Q Consensus 48 gi~V~~v~~gs----~a~~~Gl~~gD~i~~v 74 (109)
++.|..+..++ |....-|++||.++-+
T Consensus 40 ~~~i~~I~R~~~~~~p~~~~~l~~GD~l~v~ 70 (86)
T 3jxo_A 40 DSIIAAIVRGGVLVVPRGDTEILSGDKLYVI 70 (86)
T ss_dssp SEEEEEEEETTEEECCCTTCBCCTTCEEEEE
T ss_pred CCEEEEEEECCEEECCCCCCEECCCCEEEEE
Confidence 56666665443 2223339999999765
No 208
>3m7a_A Uncharacterized protein; structural genomics, unknown function, joint center for structural genomics, JCSG; HET: MSE; 1.22A {Novosphingobium aromaticivorans}
Probab=20.30 E-value=47 Score=19.88 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=16.6
Q ss_pred EEEEECCCChhhhcCCCCCCEEE
Q psy795 50 YVTEVYDESPASKSGLRMHDKIL 72 (109)
Q Consensus 50 ~V~~v~~gs~a~~~Gl~~gD~i~ 72 (109)
+|.++- .+-+++.||++||+|.
T Consensus 118 ~VLEl~-aG~~~~~gi~~Gd~v~ 139 (140)
T 3m7a_A 118 AVLEIN-GGLAARLGIKPGDKVE 139 (140)
T ss_dssp EEEEEE-TTHHHHHTCCTTCEEE
T ss_pred EEEEeC-cChHHHcCCCCCCEEe
Confidence 677764 4567778999999974
Done!