BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7952
(444 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328713283|ref|XP_001944776.2| PREDICTED: ATP-dependent DNA helicase Q5-like [Acyrthosiphon pisum]
Length = 1075
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/423 (45%), Positives = 256/423 (60%), Gaps = 48/423 (11%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L KLK F +FK +LQK AI IL R D+FVSMPTG+ + + A V P
Sbjct: 20 LLEKLKHFFHHPTFKSDLQKNAIIAILKRKFDVFVSMPTGSGKSLCYQLPA---VLHSPK 76
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ SP+++ ++ + D + + R+ E I S ++E K ++
Sbjct: 77 VTIVF-----------SPLIA--LMKDQVDHLTRLKIRA-----ETINSKMPESERKRVI 118
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L + LLYVTPE+A T+ F LL +LVR NKLAYIVVDEAHCVS+WGHDFRP Y
Sbjct: 119 NDLYATQVSTSLLYVTPEQAATDFFKGLLSYLVRKNKLAYIVVDEAHCVSQWGHDFRPDY 178
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG LR+ + IP IALTATA V +DI++ L P F T FRSNLFYDVIFD
Sbjct: 179 LKLGMLRELYLH-IPWIALTATASADVVKDIMTALCLKTPVSKFTTPCFRSNLFYDVIFD 237
Query: 276 DLLKDSYAHVKEFIEKCLGKDNK-----------ANNCGIIYCRTREHTTDLADALRRK- 323
D + +SY H+K+FI++CL D CGIIYCRTRE T ++A L RK
Sbjct: 238 DSITNSYQHLKDFIDQCLCDDLNCLEGTPNINPLTQPCGIIYCRTRELTEEIATVLSRKG 297
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ ER VQE+FM G I VITAT+SFGMGID+ VRFV+HWG+PSSIPAY
Sbjct: 298 ISIAPYHAGLKDKERLAVQEAFMSGHIQVITATVSFGMGIDKATVRFVIHWGIPSSIPAY 357
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT-----DTSTKREQLELKFKNYLSMLE 429
YQESGRAGRDG + CRIYHS+ +K SL++++K+ T K+++ + + +L M++
Sbjct: 358 YQESGRAGRDGKLARCRIYHSKQAKNSLDFILKSAITQAKTQDKQKKAKGSYSMFLKMIQ 417
Query: 430 YCE 432
+CE
Sbjct: 418 FCE 420
>gi|157110525|ref|XP_001651140.1| DNA helicase recq5 [Aedes aegypti]
gi|108878672|gb|EAT42897.1| AAEL005597-PA [Aedes aegypti]
Length = 846
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/426 (41%), Positives = 253/426 (59%), Gaps = 42/426 (9%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
G SE L KLK FG + FK LQK+AI+ I+ RT D++VSMPTG S +S
Sbjct: 231 GASSEGILQEKLKQYFGHNDFKSSLQKEAIQTIITRTRDVYVSMPTG---------SGKS 281
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
PG ++ N ++ + S +D ++ + + I S +
Sbjct: 282 LCFQLPG---VMQDNK------VTIVFSPLLALIKDQLDTLAKLK---IPADSINSKMSN 329
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +L +L+ ++ I+ LY+TPE+A T +F L++ LV++ K+AY+VVDEAHCVSEWG
Sbjct: 330 KDRDRVLNDLKSIRTDIRFLYITPEQANTSTFKELMKMLVKHKKVAYVVVDEAHCVSEWG 389
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y +LG LR SIP IALTATA V DI L+ +P FKT FR NL
Sbjct: 390 HDFRPDYLKLGYLRS-EYPSIPWIALTATASKKVVDDIFKNLRLKEPIAKFKTPCFRKNL 448
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNK-----ANNCGIIYCRTREHTTDLADALRR- 322
+YDV+F + ++D Y H++++IE L KD K CGIIYCRTRE T +A++L +
Sbjct: 449 YYDVVFKNSIQDDYIHLRDYIESILDKDEKDIKPSKKACGIIYCRTRETTERVANSLTKL 508
Query: 323 ---------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ + ER VQE +M G+ I+ATISFGMG+D+ +VRFV+HW +P S+ +
Sbjct: 509 GLKTAAYHAGLKQSERVAVQEDWMDGKYAAISATISFGMGVDKGSVRFVIHWDIPQSVAS 568
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVI-----KTDTSTKREQLELKFKNYLSML 428
YYQESGRAGRDG +S+CR+YH KS+++++ KT S K E+ +L KN+ ++
Sbjct: 569 YYQESGRAGRDGKKSFCRVYHCRDQCKSIDFLLQQDLQKTKGSAKEEKAKLAVKNFEKIV 628
Query: 429 EYCEQG 434
+YCE
Sbjct: 629 QYCESA 634
>gi|312373020|gb|EFR20851.1| hypothetical protein AND_18377 [Anopheles darlingi]
Length = 1482
Score = 320 bits (821), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 188/439 (42%), Positives = 250/439 (56%), Gaps = 42/439 (9%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
+G S G K K E L KL FG FK LQK+AI I+ RT D++VSM
Sbjct: 131 IGDSPDHLGRHALEKDTKADEL-LLEKLWKYFGHRDFKSHLQKEAIETIIARTRDVYVSM 189
Query: 73 PTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTG 132
PTGA G + F L G ++ + ++ + S +D ++
Sbjct: 190 PTGA----GKSLC------------FQLPGVMQ--DNKVTIVFSPLLALIKDQLDTLARI 231
Query: 133 RSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK 192
+ + I S + + +L +L+ VK I+ LY+TPE+A T F ++QHLV++ K
Sbjct: 232 K---IPADSINSKMGSRDRERVLNDLKAVKTDIRFLYITPEQAQTAIFKEIIQHLVKHRK 288
Query: 193 LAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKF 252
+AYIVVDEAHCVSEWGHDFRP Y +LG LR SIP IALTATA V DI L+
Sbjct: 289 VAYIVVDEAHCVSEWGHDFRPDYLKLGALRS-EYPSIPWIALTATASKQVVADIFKNLRL 347
Query: 253 NKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANN----CGIIYCR 308
+P FKT FR NL+YDV+F + ++D Y H+KE+IE LGK ++ CGIIYCR
Sbjct: 348 KEPVAKFKTQCFRHNLYYDVVFKNSIQDDYLHLKEYIESILGKQDEVKPSKRACGIIYCR 407
Query: 309 TREHTTDLADALR----RKVNKH------ERSRVQESFMRGEINVITATISFGMGIDRQN 358
TRE T +A +L R V H ER VQE +M G+ I ATISFGMG+D+ +
Sbjct: 408 TRETTERVAMSLTKLGLRTVPYHAGLKQSERETVQEDWMEGKYVAIAATISFGMGVDKGS 467
Query: 359 VRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD-----TSTK 413
VRFVVHW P ++ AYYQESGRAGRDG +SYCRIYH KS+++++K D + K
Sbjct: 468 VRFVVHWDNPQNVAAYYQESGRAGRDGKKSYCRIYHCRDQCKSIDFLLKQDLQKSKDTGK 527
Query: 414 REQLELKFKNYLSMLEYCE 432
+ KN+ M+E+CE
Sbjct: 528 EAAAKQAIKNFEKMIEFCE 546
>gi|347965591|ref|XP_001238556.3| AGAP001255-PA [Anopheles gambiae str. PEST]
gi|333470440|gb|EAU75726.3| AGAP001255-PA [Anopheles gambiae str. PEST]
Length = 1523
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 254/422 (60%), Gaps = 45/422 (10%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S++ L KL FG FK +LQK+AI I+ RT D++VSMPTGA +
Sbjct: 174 SDELLQEKLWQYFGHRDFKSQLQKEAIETIIARTRDVYVSMPTGAGKSLC---------- 223
Query: 92 IPPGADFILNGNVRSRNGWI--SPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
F L G ++ I SP+L+ ++ + D + + +D ++ V + +
Sbjct: 224 ------FQLPGVMQDNKVTIVFSPLLA--LIKDQLDTLARIKIPADSINSKMGVRDRER- 274
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
++ +L+ VK I+ LY+TPE+A T +F ++QHLV++ K+AY+VVDEAHCVSEWGH
Sbjct: 275 ----VINDLKSVKTDIRFLYITPEQANTATFKDIMQHLVKFRKVAYVVVDEAHCVSEWGH 330
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y +LG LR S+P IALTATA V +DI L+ +P FKT FR NL+
Sbjct: 331 DFRPDYLKLGNLRA-EYPSVPWIALTATASKQVVEDIFRNLRLKEPVAKFKTPCFRHNLY 389
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANN----CGIIYCRTREHTTDLADALR---- 321
YDV+F + ++D + H+K++IE LGK ++ CGIIYCRTRE+T +A L
Sbjct: 390 YDVVFKNSIQDDFLHLKDYIEGILGKQDEVKPSKRACGIIYCRTRENTERVATNLTKLGL 449
Query: 322 RKVNKH------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
R V H ER +VQE +M G+ I ATISFGMG+D+ +VRFV+HW P ++ AYY
Sbjct: 450 RTVPYHAGLKQSERDQVQEDWMEGKYVAIAATISFGMGVDKGSVRFVIHWDNPQNVAAYY 509
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD-----TSTKREQLELKFKNYLSMLEY 430
QESGRAGRDG +S+CRIYH KS+E++++ D + K E + KN+ M+E+
Sbjct: 510 QESGRAGRDGKKSFCRIYHCRDGCKSIEFLLRQDLQKSKDTPKEESAKQAVKNFEKMVEF 569
Query: 431 CE 432
CE
Sbjct: 570 CE 571
>gi|170039315|ref|XP_001847485.1| ATP-dependent DNA helicase recQ [Culex quinquefasciatus]
gi|167862886|gb|EDS26269.1| ATP-dependent DNA helicase recQ [Culex quinquefasciatus]
Length = 859
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 172/424 (40%), Positives = 251/424 (59%), Gaps = 46/424 (10%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L KLK FG + FK LQK+AI+ I+ RT D++VSMPTG S +S PG
Sbjct: 242 LQEKLKQYFGHNDFKSPLQKEAIQTIISRTRDVYVSMPTG---------SGKSLCFQLPG 292
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
++ N ++ + S +D ++ + + I S + + +L
Sbjct: 293 ---VMQDN------RVTIVFSPLLALIKDQLDTLAKLK---IPADSINSKMSNKDRDRVL 340
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L+ ++ I+ LY+TPE+A T +F L++ LV++ K+AY+VVDEAHCVSEWGHDFRP Y
Sbjct: 341 NDLKSIRTDIRFLYITPEQANTATFKELMKLLVKHKKVAYVVVDEAHCVSEWGHDFRPDY 400
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG LR SIP IALTATA V DI L+ +P FKT FR NLFYDV+F
Sbjct: 401 LKLGYLRT-EYPSIPWIALTATASKQVVSDIFKNLRLKEPVAKFKTPCFRKNLFYDVVFK 459
Query: 276 DLLKDSYAHVKEFIEKCLGKDN-----KANNCGIIYCRTREHTTDLADALRR-------- 322
+ ++D Y H++++IE L K++ CGIIYCRTRE T +A++L +
Sbjct: 460 NSIQDDYIHLRDYIESILEKEDVDVKPSKKACGIIYCRTRETTERVANSLSKLGLKAAAY 519
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ + ER VQE +M G+ VI+ATISFGMG+D+ +VRFV+HW +P ++ +YYQESGR
Sbjct: 520 HAGLKQSERVAVQEDWMDGKYPVISATISFGMGVDKGSVRFVIHWDIPQNVASYYQESGR 579
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD---------TSTKREQLELKFKNYLSMLEYC 431
AGRDG +SYCRIYH KS++++++ D K ++ +L KN+ ++++C
Sbjct: 580 AGRDGKKSYCRIYHCREQCKSIDFLLRQDLGKSKDKDGKEDKHDKAKLAVKNFEKIVDFC 639
Query: 432 EQGY 435
E Y
Sbjct: 640 ESAY 643
>gi|270009277|gb|EFA05725.1| homolog of RecQ [Tribolium castaneum]
Length = 1715
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/433 (39%), Positives = 259/433 (59%), Gaps = 44/433 (10%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVS 85
+K ++ E + A LK+ F FDSFK ELQ+ A+ I R HD+ VSMPTG+ G +
Sbjct: 903 KKPSEMDESTIKAALKSAFKFDSFKSELQQAAVTEICQRQHDVLVSMPTGS----GKSLC 958
Query: 86 ARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG 145
+ + P I+ SP+L+ ++ + D + + R+ + + S
Sbjct: 959 YQLPAVLRPNQTTIV----------FSPLLA--LIKDQIDHLNALKIRA-----KSLNSK 1001
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+K++ A++ +L+ +P +LLY+TPE+A T++F L +LV+++K+A++VVDEAHCVS
Sbjct: 1002 TSKSDRDALIADLKSTQPLTRLLYITPEQAATKTFKSLYDNLVKFDKVAFVVVDEAHCVS 1061
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
+WGHDFRP Y +LGELR IP +ALTATA V +DII+ LK K+FKTS FR
Sbjct: 1062 QWGHDFRPDYLKLGELR---AKKIPFVALTATAGAEVTKDIITSLKL-ADLKLFKTSCFR 1117
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL--------- 316
+NL+YDV+F +L+++ + H+K+FI CL + +CGI+YCRTRE T +
Sbjct: 1118 ANLYYDVLFQNLIENEFLHLKKFIVGCL---EDSQDCGIVYCRTREQTEAVTFKLNSLGL 1174
Query: 317 -ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
A A + ER + QE + RG+ VI ATISFGMG+D+ VRFVVHWG+P ++Y
Sbjct: 1175 KARAYHAGLKNTERLQCQEEWQRGDSQVICATISFGMGVDKATVRFVVHWGVPKDPASFY 1234
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK------TDTSTKREQLELKFKNYLSMLE 429
QESGRAGRDG + CRIY++ +++ + + D +++ + E K++ M+E
Sbjct: 1235 QESGRAGRDGKPAKCRIYYNRGDSRAILFHLNHDLGKAKDKQSRKIKAENALKSFKKMVE 1294
Query: 430 YCEQGYFLVILVF 442
+CE + +F
Sbjct: 1295 FCENSDYCRHKLF 1307
>gi|334322907|ref|XP_001377617.2| PREDICTED: ATP-dependent DNA helicase Q5 [Monodelphis domestica]
Length = 996
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/420 (41%), Positives = 244/420 (58%), Gaps = 42/420 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 14 EQRVRRTLKKIFGFDSFKTNLQENATMAVVKGEKDVFVCMPTGA----GKSLCYQLPALL 69
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ +D ++ + + L +S Q E K
Sbjct: 70 AAGITIV-----------ISPLIA----LIQDQVDHLLALKVHVCSLNSKLSAQ---ERK 111
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL +L KP+ K+LY+TPE A + SF +L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 112 KILMDLEKEKPQTKILYITPEMAASASFQPILNSLVSRHLLSYLVVDEAHCVSQWGHDFR 171
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA V++D+++ LK +P +FKTS FR+NLFYDV
Sbjct: 172 PDYLRLGALRNRIPDA-PCVALTATATQKVQEDVVTALKLRQPVAIFKTSCFRANLFYDV 230
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDLADALRRK------ 323
F DLL D Y ++K+F K LG+ N ++CGIIYCRTRE LA L +
Sbjct: 231 QFKDLLGDPYGNLKDFCLKALGQKNDKGAFSSCGIIYCRTREACEQLATELSSRGVKAKA 290
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ +R VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 291 YHAGLKAEDRMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 350
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSM------LEYCEQ 433
RAGRDGL S+CR+Y+S + + ++IK + S +E+ K + SM +++CE+
Sbjct: 351 RAGRDGLPSWCRLYYSRKDRDQVSFLIKKEISKLQEKRGNKDSDKASMAAFEAVVDFCEK 410
>gi|242008765|ref|XP_002425170.1| DNA helicase recq5, putative [Pediculus humanus corporis]
gi|212508872|gb|EEB12432.1| DNA helicase recq5, putative [Pediculus humanus corporis]
Length = 853
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/420 (41%), Positives = 246/420 (58%), Gaps = 44/420 (10%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L KLK FG D F+ E+Q+ AI+ +L D+++SMPTG S +S P
Sbjct: 3 KLLEKLKTYFGHDRFRSEIQENAIKTVLKGNQDVYISMPTG---------SGKSLCFQLP 53
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
+L N + SP++S K I + + + S + + A
Sbjct: 54 A---VLQENKVAI--VFSPLISLM-------KDQIDHLKKLNIKAVTLNSKMNEKDRTAT 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ L+ VK I L YV PE+ + +F LL +L ++Y VVDEAHC+S+WGHDFR
Sbjct: 102 INGLKAVKCDISLFYVAPEQIKSATFLSLLTYLYSKKMISYFVVDEAHCISQWGHDFRSE 161
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y +LG LR +F G IP IALTATA V++DII+ LK N+P+ FK FR NL+YDV+
Sbjct: 162 YLKLGSLRIKFPG--IPYIALTATASCEVEKDIINNLKLNRPFGKFKVPCFRKNLYYDVV 219
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANN-----CGIIYCRTREHTTDLADALRRK----- 323
F D+L D H+K FI+KCL + +K GIIYCRTRE T D+ L +K
Sbjct: 220 FRDILDDDVEHLKTFIDKCLAQTSKTEKKSMLPSGIIYCRTRESTEDIVKLLLKKGLTIQ 279
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R +VQ +M G+ VI+AT+SFGMGID+ VRFVVHWGMP S+ AYYQES
Sbjct: 280 AYHAGLSDKQRIQVQNDWMSGKCPVISATVSFGMGIDKAAVRFVVHWGMPQSVAAYYQES 339
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD-----TSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDGL S CRIY+S+ + +++++KT+ T K E+ +L +K+Y M+ YCE+
Sbjct: 340 GRAGRDGLPSLCRIYYSKIERDRVDFILKTEARKAKTEDKVEKAKLAYKSYERMVRYCEE 399
>gi|357627528|gb|EHJ77194.1| DNA helicase recq5 [Danaus plexippus]
Length = 1133
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 246/418 (58%), Gaps = 43/418 (10%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+T KL FG FK ELQ++A+R I HD+FVSMPTG+ G
Sbjct: 4 VTEKLLQCFGHRRFKSELQERAVRAIARGVHDVFVSMPTGS------------------G 45
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ++ + S +D + + E I S T+ + + +L
Sbjct: 46 KSLCFQLPAMLQENKVAVVFSPLLALIKDQVDHLTKLK---IAAESINSKMTQKDRERVL 102
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+LR +KP + LYVTPE+A T +F L++HLV+Y K++Y+VVDEAHCVSEWGHDFRP Y
Sbjct: 103 NDLRSMKPNTRFLYVTPEQAATGTFKALMEHLVKYKKVSYVVVDEAHCVSEWGHDFRPDY 162
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG LR+ SIP +ALTATA V +DI+ LK P +KT +FR NL+YDV++
Sbjct: 163 LKLGNLRE-KFKSIPWVALTATASAEVTKDILENLKLLNPVAQYKTPSFRRNLYYDVVYQ 221
Query: 276 DLLKDSYAHVKEFIEKCLGKDN-----KANNCGIIYCRTREHTTDLADALRRK------- 323
+ ++D + EF++K L KD K + I+YCRTRE T D+A L ++
Sbjct: 222 NCIQDEIGDLVEFLKKNL-KDEISVKPKDKSAAIVYCRTREQTEDIASMLTKRGLNCLAY 280
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER VQ+ + GE+ ++AT+SFGMG+D+ +VR VVHWG+P ++ AYYQESGR
Sbjct: 281 HGGLKSSERVSVQDRWSNGEVPCVSATVSFGMGVDKASVRAVVHWGLPQNVAAYYQESGR 340
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD-----TSTKREQLELKFKNYLSMLEYCEQ 433
AGRDG ++CRIY+ + ++++++K++ T ++++ + +K++ M++YCE+
Sbjct: 341 AGRDGKPAFCRIYYCRSERNAVDFLLKSEIARSKTPEQKQRCKNAYKSFEVMVKYCEE 398
>gi|193786741|dbj|BAG52064.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 245/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S Q E K
Sbjct: 69 AKGNTIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|51242947|ref|NP_001003715.1| ATP-dependent DNA helicase Q5 isoform 2 [Homo sapiens]
gi|5410448|gb|AAD43061.1|AF135183_1 Recq helicase 5 [Homo sapiens]
gi|7959115|dbj|BAA95954.1| DNA helicase recQ5 gamma [Homo sapiens]
gi|16877308|gb|AAH16911.1| RECQL5 protein [Homo sapiens]
gi|119609699|gb|EAW89293.1| RecQ protein-like 5, isoform CRA_d [Homo sapiens]
Length = 435
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 245/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S Q E K
Sbjct: 69 AKGITIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|426346802|ref|XP_004041060.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 3 [Gorilla gorilla
gorilla]
gi|426346804|ref|XP_004041061.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Gorilla gorilla
gorilla]
Length = 435
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 245/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S Q E K
Sbjct: 69 AKGITIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|51242943|ref|NP_001003716.1| ATP-dependent DNA helicase Q5 isoform 3 [Homo sapiens]
gi|5410449|gb|AAD43062.1|AF135183_2 Recq helicase 5 [Homo sapiens]
gi|4191812|dbj|BAA74454.1| DNA helicase [Homo sapiens]
gi|7959111|dbj|BAA95952.1| DNA helicase recQ5 alpha [Homo sapiens]
gi|119609700|gb|EAW89294.1| RecQ protein-like 5, isoform CRA_e [Homo sapiens]
gi|119609701|gb|EAW89295.1| RecQ protein-like 5, isoform CRA_e [Homo sapiens]
Length = 410
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 245/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S Q E K
Sbjct: 69 AKGITIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|340377955|ref|XP_003387494.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Amphimedon
queenslandica]
Length = 906
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/428 (39%), Positives = 246/428 (57%), Gaps = 45/428 (10%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
G S ++L LK FG+ FK LQ++A+ + D+F+SMPTG S +S
Sbjct: 4 GTSSSKDLRKSLKEHFGYSEFKTSLQREAVECVFEGKKDVFISMPTG---------SGKS 54
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
P + ++ G ++ +LS D +S+ +S + S +
Sbjct: 55 LCYQLPA--------LLAKKG-LALVLSPLIALIEDQVSSL---QSKGLPAVALNSKTSA 102
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
++ I +L+L P IKLLYVTPE T +F L L R + +I +DEAHCVSEWG
Sbjct: 103 SDRSKIASQLKLKSPPIKLLYVTPEMVATSNFRETLTRLHRNGGVVFIAIDEAHCVSEWG 162
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y +LGELR +PIIALTATA P V++D++ LK +P VFK+S FR NL
Sbjct: 163 HDFRPDYLKLGELRGVVPG-VPIIALTATATPRVQEDVVRSLKMREPVSVFKSSCFRPNL 221
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
FY+V F + LKD + ++I + L + CGIIYCRTRE +LA + K
Sbjct: 222 FYNVSFKETLKDPLKDLCDYITEAL-TSSTTEGCGIIYCRTREGCGELAGRITSKGILAK 280
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ +ERS+VQE +M+G + +I ATISFGMG+D+ NVRFVVHW +P I AYYQES
Sbjct: 281 PYHAGLKSNERSQVQEQWMKGVVPIIVATISFGMGVDKANVRFVVHWTLPKGIEAYYQES 340
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS---TKREQLELKF---------KNYLS 426
GRAGRDGL++YCRIY+S + L ++++ + S TK+ + + K K++ +
Sbjct: 341 GRAGRDGLKAYCRIYYSRFDRDQLLFLLQKEISEKETKKGKSQFKSASRSKEATEKSFET 400
Query: 427 MLEYCEQG 434
+++YCE+
Sbjct: 401 LVKYCEEA 408
>gi|426346798|ref|XP_004041058.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Gorilla gorilla
gorilla]
Length = 1006
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 243/419 (57%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|300796980|ref|NP_001179255.1| ATP-dependent DNA helicase Q5 [Bos taurus]
gi|296476023|tpg|DAA18138.1| TPA: RecQ protein-like 5-like [Bos taurus]
Length = 987
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/410 (40%), Positives = 237/410 (57%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+KAI ++ D+FV MPTGA + + A
Sbjct: 12 ERRVRSTLKKVFGFDSFKTPLQEKAIMAVVKGDKDVFVCMPTGAGKSLCYQLPA------ 65
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 66 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSVQ---ERK 109
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 110 ELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 169
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 170 PDYLRLGALRSRLADA-PCVALTATATPQVREDVFAALHLKQPVATFKTPCFRANLFYDV 228
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D Y ++++F K LG+ D + CGIIYCRTRE LA L R VN
Sbjct: 229 QFKELLPDPYGNLRDFCLKALGQKADKGLSGCGIIYCRTREACEQLATELSYRGVNAKAY 288
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 289 HAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 348
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + ++I+ + + +E+ K + ++L +
Sbjct: 349 AGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKASDKAAVLAF 398
>gi|148612816|ref|NP_004250.4| ATP-dependent DNA helicase Q5 isoform 1 [Homo sapiens]
gi|22654276|sp|O94762.2|RECQ5_HUMAN RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA
helicase, RecQ-like type 5; Short=RecQ5; AltName:
Full=RecQ protein-like 5
gi|7959113|dbj|BAA95953.1| DNA helicase recQ5 beta [Homo sapiens]
gi|119609695|gb|EAW89289.1| RecQ protein-like 5, isoform CRA_a [Homo sapiens]
gi|119609697|gb|EAW89291.1| RecQ protein-like 5, isoform CRA_a [Homo sapiens]
Length = 991
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 243/419 (57%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|148342513|gb|ABQ59039.1| RECQL5 protein [Homo sapiens]
Length = 991
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 243/419 (57%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|332260119|ref|XP_003279133.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Nomascus
leucogenys]
gi|332260121|ref|XP_003279134.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Nomascus
leucogenys]
Length = 435
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 245/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S Q E K
Sbjct: 69 ARGITIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRTRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVN---- 325
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 326 -----KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKSSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|197102262|ref|NP_001126651.1| ATP-dependent DNA helicase Q5 [Pongo abelii]
gi|55732243|emb|CAH92825.1| hypothetical protein [Pongo abelii]
Length = 990
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 244/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNTLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQETDKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ ++M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNNWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKPSDKATVMAFDALVTFCEE 408
>gi|221044892|dbj|BAH14123.1| unnamed protein product [Homo sapiens]
Length = 1018
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 243/419 (57%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 408
>gi|338711535|ref|XP_001492159.3| PREDICTED: ATP-dependent DNA helicase Q5, partial [Equus caballus]
Length = 955
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 166/412 (40%), Positives = 237/412 (57%), Gaps = 41/412 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A +
Sbjct: 19 LKKVFGFDSFKTPLQESATMAVVKGDKDVFVCMPTGAGKSLCYQLPA-----------LL 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
G I+ ++S +D ++ + + L +S Q E K +L +L
Sbjct: 68 AKG--------ITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSAQ---EKKELLSDLE 116
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KPR KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFRP Y RLG
Sbjct: 117 QEKPRTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLG 176
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR ++ P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV F +LL
Sbjct: 177 ALRSRLAHA-PCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANLFYDVQFKELLS 235
Query: 280 DSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH--------- 327
D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 236 DPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSYRGVNAKAYHAGLKAS 295
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 296 ERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKP 355
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 356 SWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKAAVVAFDALVSFCEE 407
>gi|335297361|ref|XP_003358019.1| PREDICTED: ATP-dependent DNA helicase Q5 [Sus scrofa]
Length = 451
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 244/419 (58%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ AI ++ D+FV MPTGA G + + +
Sbjct: 9 ERRVRSTLKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGA----GKSLCYQLPALL 64
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ +D ++ + + L +S Q E K
Sbjct: 65 AKGITIV-----------ISPLIA----LIQDQVDHLLALKIHVCSLNSKLSAQ---ERK 106
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L+ L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 107 ELLSDLEQEKPRTKLLYITPEMAASASFQPTLKSLLARHLLSYLVVDEAHCVSQWGHDFR 166
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA V++D+ + L +P FKT FR+NLFYDV
Sbjct: 167 PDYLRLGALRSRLAHA-PCVALTATATLQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 225
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 226 QFKELLSDPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSARGVNAKAY 285
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M G++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 286 HAGLKAAERTLVQNEWMEGKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 345
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 346 AGRDGRPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKAALSAFDALVAFCEE 404
>gi|440895196|gb|ELR47457.1| ATP-dependent DNA helicase Q5 [Bos grunniens mutus]
Length = 987
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/403 (41%), Positives = 233/403 (57%), Gaps = 35/403 (8%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGFDSFK LQ+KAI ++ D+FV MPTGA + + A +
Sbjct: 19 LKKVFGFDSFKTPLQEKAIMAVVKGDKDVFVCMPTGAGKSLCYQLPA-----------LL 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
G I+ ++S +D ++ + + L +S Q E K +L +L
Sbjct: 68 AKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSVQ---ERKELLSDLE 116
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFRP Y RLG
Sbjct: 117 QEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFRPDYLRLG 176
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV F +LL
Sbjct: 177 ALRSRLADA-PCVALTATATPQVREDVFAALHLKQPVATFKTPCFRANLFYDVQFKELLP 235
Query: 280 DSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH--------- 327
D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 236 DPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLATELSYRGVNAKAYHAGLKAP 295
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 296 ERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKP 355
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
S+CR+Y+S + + ++I+ + + +E+ K + ++L +
Sbjct: 356 SWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKASDKAAVLAF 398
>gi|189238078|ref|XP_971743.2| PREDICTED: similar to DNA helicase recq5 [Tribolium castaneum]
Length = 1707
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 258/433 (59%), Gaps = 46/433 (10%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVS 85
+K ++ E + A LK+ F FDSFK ELQ+ A +L HD+ VSMPTG+ G +
Sbjct: 897 KKPSEMDESTIKAALKSAFKFDSFKSELQQAA--GAVLGQHDVLVSMPTGS----GKSLC 950
Query: 86 ARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG 145
+ + P I+ SP+L+ ++ + D + + R+ + + S
Sbjct: 951 YQLPAVLRPNQTTIV----------FSPLLA--LIKDQIDHLNALKIRA-----KSLNSK 993
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+K++ A++ +L+ +P +LLY+TPE+A T++F L +LV+++K+A++VVDEAHCVS
Sbjct: 994 TSKSDRDALIADLKSTQPLTRLLYITPEQAATKTFKSLYDNLVKFDKVAFVVVDEAHCVS 1053
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
+WGHDFRP Y +LGELR IP +ALTATA V +DII+ LK K+FKTS FR
Sbjct: 1054 QWGHDFRPDYLKLGELR---AKKIPFVALTATAGAEVTKDIITSLKL-ADLKLFKTSCFR 1109
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL--------- 316
+NL+YDV+F +L+++ + H+K+FI CL + +CGI+YCRTRE T +
Sbjct: 1110 ANLYYDVLFQNLIENEFLHLKKFIVGCL---EDSQDCGIVYCRTREQTEAVTFKLNSLGL 1166
Query: 317 -ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
A A + ER + QE + RG+ VI ATISFGMG+D+ VRFVVHWG+P ++Y
Sbjct: 1167 KARAYHAGLKNTERLQCQEEWQRGDSQVICATISFGMGVDKATVRFVVHWGVPKDPASFY 1226
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK------TDTSTKREQLELKFKNYLSMLE 429
QESGRAGRDG + CRIY++ +++ + + D +++ + E K++ M+E
Sbjct: 1227 QESGRAGRDGKPAKCRIYYNRGDSRAILFHLNHDLGKAKDKQSRKIKAENALKSFKKMVE 1286
Query: 430 YCEQGYFLVILVF 442
+CE + +F
Sbjct: 1287 FCENSDYCRHKLF 1299
>gi|355754382|gb|EHH58347.1| hypothetical protein EGM_08175 [Macaca fascicularis]
Length = 991
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 239/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 DLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKASDKATILAF 399
>gi|444727835|gb|ELW68313.1| ATP-dependent DNA helicase Q5 [Tupaia chinensis]
Length = 973
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 163/410 (39%), Positives = 236/410 (57%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+++ + LK +FGFDSFK LQ++A ++ D+FV MPTGA + + A
Sbjct: 13 ERQVRSTLKKVFGFDSFKTPLQERATMAVVRGDKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVPVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLCDLEQDKPRTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGVLRSRLGHT-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLA----------DAL 320
F +L+ D Y ++++F K LG+ D + CGI+YCRTRE LA A
Sbjct: 230 QFKELISDPYGNLRDFCLKALGQKADEGGSGCGIVYCRTREACEQLAIELSCRGVSAKAY 289
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER+ VQ +M + VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKAAERTLVQSEWMEERVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++IK + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIKKEIAKLQEKRGNKASDKATLLAF 399
>gi|355568922|gb|EHH25203.1| hypothetical protein EGK_08985 [Macaca mulatta]
Length = 991
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 239/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQENATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 DLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 399
>gi|380790165|gb|AFE66958.1| ATP-dependent DNA helicase Q5 isoform 1 [Macaca mulatta]
gi|383412321|gb|AFH29374.1| ATP-dependent DNA helicase Q5 isoform 1 [Macaca mulatta]
Length = 991
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 239/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQENATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 DLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 399
>gi|403280534|ref|XP_003931772.1| PREDICTED: ATP-dependent DNA helicase Q5 [Saimiri boliviensis
boliviensis]
Length = 990
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 237/410 (57%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G + P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGRA-PCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQKADKRLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + S++ +
Sbjct: 350 AGRDGNPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKASIMAF 399
>gi|332849065|ref|XP_003339348.1| PREDICTED: ATP-dependent DNA helicase Q5 [Pan troglodytes]
gi|332849067|ref|XP_003315779.1| PREDICTED: ATP-dependent DNA helicase Q5 [Pan troglodytes]
Length = 435
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/423 (39%), Positives = 246/423 (58%), Gaps = 49/423 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++T + + L +S + E K
Sbjct: 69 AKGITIV-----------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAR---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN----------YLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +L++K N + +++ +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA----KLQVKRGNKASDKATIMAFDALVTF 405
Query: 431 CEQ 433
CE+
Sbjct: 406 CEE 408
>gi|114670488|ref|XP_001144082.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Pan
troglodytes]
gi|410207584|gb|JAA01011.1| RecQ protein-like 5 [Pan troglodytes]
gi|410261024|gb|JAA18478.1| RecQ protein-like 5 [Pan troglodytes]
gi|410299660|gb|JAA28430.1| RecQ protein-like 5 [Pan troglodytes]
gi|410336147|gb|JAA37020.1| RecQ protein-like 5 [Pan troglodytes]
Length = 991
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 243/423 (57%), Gaps = 49/423 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S + E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAR---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS----------MLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +L++K N S ++ +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA----KLQVKRGNKASDKATIMAFDALVTF 405
Query: 431 CEQ 433
CE+
Sbjct: 406 CEE 408
>gi|397484324|ref|XP_003813327.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Pan paniscus]
Length = 991
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 243/423 (57%), Gaps = 49/423 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++T + + L +S + E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLTLKVRVSSLNSKLSAR---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS----------MLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +L++K N S ++ +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA----KLQVKRGNKASDKATIMAFDALVTF 405
Query: 431 CEQ 433
CE+
Sbjct: 406 CEE 408
>gi|402901083|ref|XP_003913486.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Papio anubis]
Length = 991
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 239/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 DLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRCRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 399
>gi|109118218|ref|XP_001098200.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Macaca mulatta]
Length = 991
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 239/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQENATMAVVKGNKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L +P+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 DLLADLEREEPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 290 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 399
>gi|431908771|gb|ELK12363.1| ATP-dependent DNA helicase Q5 [Pteropus alecto]
Length = 991
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 238/419 (56%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 12 EHRVQSTLKKVFGFDSFKTPLQESATMAVVKGDKDVFVCMPTGAGKSLCYQLPA------ 65
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 66 -----LLTKG--------ITVVVSPLIALIQDQVDHLLALKVQVSSLNSKLSAQ---EKK 109
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A SF L LV L+Y+VVDEAHCVS+WGHDFR
Sbjct: 110 ELLSDLEQEKPRTKLLYITPEMAAAASFQPTLNSLVSRRLLSYLVVDEAHCVSQWGHDFR 169
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 170 PDYLRLGALRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVAAFKTPCFRANLFYDV 228
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D + ++++F K LG+ D + + CGI+YCRTRE LA L R VN
Sbjct: 229 QFKELLFDPFGNLRDFCIKALGQKADKRLSGCGIVYCRTREACEQLAIELSYRGVNAKAY 288
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 289 HAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 348
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK------FKNYLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K F + +++ +CE+
Sbjct: 349 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKSAFLAFDALVTFCEE 407
>gi|296203193|ref|XP_002748783.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Callithrix
jacchus]
Length = 990
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 165/410 (40%), Positives = 236/410 (57%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 EPRVRSTLKKVFGFDSFKTPLQESATMAVVKGNTDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAEG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L+ KP+ K+LY+TPE A + SF L LV L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLADLKQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLKDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKVSERMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + S++ +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKASIMAF 399
>gi|18485510|ref|NP_569721.1| ATP-dependent DNA helicase Q5 [Mus musculus]
gi|17511226|dbj|BAB79232.1| RecQ helicase protein-like 5 beta [Mus musculus]
gi|148702584|gb|EDL34531.1| RecQ protein-like 5, isoform CRA_b [Mus musculus]
gi|162317946|gb|AAI56759.1| RecQ protein-like 5 [synthetic construct]
Length = 982
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 239/411 (58%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGAEDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ +G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLASG--------ITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L LV N L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLVSRNLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVASFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLADAL-RRKVNKH- 327
F +L+ D Y ++++F K LG+ + ++ CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYCRTREACEQLAIELSSRGVNAKA 289
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+R++VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 290 YHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 349
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKLQEKRGNKPSDKATLLAF 400
>gi|395825932|ref|XP_003786174.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Otolemur
garnettii]
Length = 987
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 237/411 (57%), Gaps = 35/411 (8%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E+ + + LK +FGFDSFK LQK A ++ D+FV MPTGA + + A
Sbjct: 12 TERRVQSTLKKVFGFDSFKTPLQKSATMAVVKGDKDVFVCMPTGAGKSLCYQLPA----- 66
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G I+ ++S +D ++T + + L +S Q E
Sbjct: 67 ------LLTKG--------ITLVVSPLIALIQDQVDHLLTLKVQVSSLNSKLSAQ---ER 109
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
K +L +L KP+ +LLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDF
Sbjct: 110 KELLSDLEREKPQTRLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDF 169
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP Y RLG LR G + P +ALTATA P V++D+ + L +P FKT FR+NLFYD
Sbjct: 170 RPDYLRLGTLRSRLGRT-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYD 228
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH- 327
V F +L+ D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 229 VQFKELISDLYGNLRDFCLKALGQKTDKGLSGCGIVYCRTREACEQLAVELSCRGVNAKA 288
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ Y QESG
Sbjct: 289 YHAGLKASERTLVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYCQESG 348
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 349 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATLLAF 399
>gi|426238466|ref|XP_004013174.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Ovis aries]
Length = 985
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 237/410 (57%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ++AI ++ D+FV MPTGA + + A
Sbjct: 12 ERRVRSMLKKVFGFDSFKTPLQERAIMAVVKGDQDVFVCMPTGAGKSLCYQLPA------ 65
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 66 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSVQ---ERK 109
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 110 ELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 169
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV
Sbjct: 170 PDYLRLGALRSRLADA-PCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANLFYDV 228
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D Y ++++F K LG+ D + GIIYCRTRE LA L R VN
Sbjct: 229 QFKELLPDPYGNLRDFCLKALGQKADKGLSGGGIIYCRTREACEQLAIELSYRGVNAKAY 288
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 289 HAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 348
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + ++IK + + +E+ K + ++L +
Sbjct: 349 AGRDGKPSWCRLYYSRSDRDQVSFLIKKEVAKLQEKRGNKASDKAAVLAF 398
>gi|395533035|ref|XP_003768569.1| PREDICTED: ATP-dependent DNA helicase Q5 [Sarcophilus harrisii]
Length = 995
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/420 (40%), Positives = 241/420 (57%), Gaps = 42/420 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 14 EQRVRRTLKKIFGFDSFKTNLQESATLAVVKGEKDVFVCMPTGA----GKSLCYQLPALL 69
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ +D ++ + + L +S Q E K
Sbjct: 70 AAGITIV-----------ISPLIA----LIQDQVDHLLALKVCVCSLNSKLSAQ---EKK 111
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL +L KP+ KLLY+TPE A + SF +L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 112 KILMDLENEKPQTKLLYITPEMAASASFQPILNSLVSRHLLSYLVVDEAHCVSQWGHDFR 171
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR+ ++ P +ALTATA V++D+++ LK +P +FKT FR+NLFYDV
Sbjct: 172 PDYLRLGALRKRIPHA-PCVALTATATQQVQEDVVTALKLRQPIAIFKTPCFRANLFYDV 230
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKAN---NCGIIYCRTREHTTDLADALRRK------ 323
F DLL D Y ++K+F K LG+ N CGI+YCR RE +A L +
Sbjct: 231 QFKDLLGDPYGNLKDFCLKALGQKNDKGAFPGCGIVYCRMREACEQVAKELSSRGIKAKA 290
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ +R VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 291 YHAGLKTEDRMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 350
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK------FKNYLSMLEYCEQ 433
RAGRDG S+CR+Y+S + + + ++IK + S +E+ K + S++++CE+
Sbjct: 351 RAGRDGQPSWCRLYYSRNDRDQVCFLIKKEISKLQEKRGNKDCDKASMAAFESLVDFCEK 410
>gi|410981698|ref|XP_003997203.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Felis catus]
Length = 987
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 235/411 (57%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 10 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGDKDVFVCMPTGAGKSLCYQLPA------ 63
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 64 -----VLAKG--------ITIVISPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---EKK 107
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 108 ELLSDLEQEKPQTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 167
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 168 PDYLRLGTLRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 226
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN---CGIIYCRTREHTTDLADALR-RKVN--- 325
F +LL D Y ++K+F K LG+ + CGI+YCRTRE LA L R VN
Sbjct: 227 QFKELLSDPYGNLKDFCLKALGQKTAKGSLSGCGIVYCRTREACEQLATELSYRGVNAKA 286
Query: 326 ------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 287 YHAGLKPSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 346
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 347 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKASDKAAVLAF 397
>gi|432104137|gb|ELK30964.1| ATP-dependent DNA helicase Q5 [Myotis davidii]
Length = 410
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/420 (39%), Positives = 238/420 (56%), Gaps = 42/420 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 12 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGDKDVFVCMPTGA----GKSLCYQLPALL 67
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ +D ++ + + L + Q E K
Sbjct: 68 AKGITIV-----------ISPLIA----LIQDQVDHLLALKVQVRSLNSKLPAQ---EKK 109
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 110 ELLSDLEQEKPRTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 169
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 170 PDYLRLGALRSRLAHA-PCVALTATATPQVREDVFAALHLKQPVAAFKTPCFRANLFYDV 228
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDL----------ADA 319
F +LL D Y ++++F K LG K K + CGIIYCRTRE L A A
Sbjct: 229 QFKELLSDPYGNLRDFCLKALGQKAGKGVLSGCGIIYCRTREACEQLAIELGYRGLSAKA 288
Query: 320 LRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 289 YHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 348
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK------FKNYLSMLEYCEQ 433
RAGRDG S+CR+Y+S + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 349 RAGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKASDKAALQAFEALVTFCEE 408
>gi|301768981|ref|XP_002919891.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Ailuropoda
melanoleuca]
Length = 985
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 236/411 (57%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 10 ERRVRSTLKKVFGFDSFKTPLQESATMAVVRGDKDVFVCMPTGAGKSLCYQLPA------ 63
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 64 -----LLAKG--------ITIVISPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---EKK 107
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 108 ELLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 167
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 168 PDYLRLGTLRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 226
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDLADALRRK------ 323
F +LL D Y ++++F K LG K +K + CGI+YCRTRE LA L +
Sbjct: 227 QFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSHRGVSAKA 286
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 287 YHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 346
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 347 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKAAVLAF 397
>gi|281350039|gb|EFB25623.1| hypothetical protein PANDA_008576 [Ailuropoda melanoleuca]
Length = 979
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 236/411 (57%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 4 ERRVRSTLKKVFGFDSFKTPLQESATMAVVRGDKDVFVCMPTGAGKSLCYQLPA------ 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 58 -----LLAKG--------ITIVISPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---EKK 101
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 102 ELLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 161
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 162 PDYLRLGTLRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 220
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDLADALRRK------ 323
F +LL D Y ++++F K LG K +K + CGI+YCRTRE LA L +
Sbjct: 221 QFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSHRGVSAKA 280
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 281 YHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 340
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 341 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKAAVLAF 391
>gi|351707850|gb|EHB10769.1| ATP-dependent DNA helicase Q5 [Heterocephalus glaber]
Length = 989
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 238/410 (58%), Gaps = 35/410 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ++A ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQERATMAVVKGDKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSMQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF +L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLSDLEQEKPQTKLLYITPEMAASTSFQPILSSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA V++D+ + L +P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLAHA-PCVALTATATRQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADAL-RRKVNKH-- 327
F +L+ D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELISDPYGNLRDFCLKALGQKTDKGLSGCGIVYCRTRESCEQLAIELSSRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+R++VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKASDRTQVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++IK + + +E+ K + ++L +
Sbjct: 350 AGRDGKPSWCRLYYSRNDRDQVSFLIKKEVAKLQEKRGNKSSDKATLLAF 399
>gi|348551294|ref|XP_003461465.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Cavia porcellus]
Length = 989
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 234/396 (59%), Gaps = 35/396 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ++A ++ D+FV MPTGA G + + +
Sbjct: 12 ERRVRSTLKKVFGFDSFKTPLQERATMAVVKGDKDVFVCMPTGA----GKSLCYQLPALL 67
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+L+ +D ++ + Q+ + S + E K
Sbjct: 68 AKGITIV-----------ISPLLA----LIQDQVDHLLALK---VQVSSLSSKTSVQEKK 109
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF +L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 110 ELLSDLEREKPQTKLLYITPEMAASTSFQPILSSLVSRHLLSYLVVDEAHCVSQWGHDFR 169
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 170 PDYLRLGALRSRLVHA-PCLALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 228
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADAL-RRKVNKH-- 327
F +L+ D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 229 QFKELISDPYGNLRDFCRKALGQKTDKMLSGCGIVYCRTREACEQLAIELSSRGVNAKAY 288
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+R++VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 289 HAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 348
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
AGRDG S+CR+Y+S + + ++I+ + + +E+
Sbjct: 349 AGRDGKPSWCRLYYSRIDRDQVSFLIRKEVAKLQEK 384
>gi|344291164|ref|XP_003417306.1| PREDICTED: ATP-dependent DNA helicase Q5 [Loxodonta africana]
Length = 410
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 239/419 (57%), Gaps = 41/419 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ AI ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVQSTLKKIFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ +D ++ + + L +S Q E K
Sbjct: 69 AKGITIV-----------ISPLIA----LIQDQVDHLLALKVHVASLNSKLSAQ---EKK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 EVLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA V++D+ + L P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLSHA-PCVALTATATLQVQEDVFAALHLKPPVATFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELLSDPYGNLRDFCLKALGEKADKGPSGCGIVYCRTREACEQLAIELSYRGVNAKAY 289
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+R VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 290 HAGLKAPDRMLVQSEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 349
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 350 AGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKASDKAAISAFDALVTFCEE 408
>gi|427788647|gb|JAA59775.1| Putative atp-dependent dna helicase [Rhipicephalus pulchellus]
Length = 924
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/417 (39%), Positives = 239/417 (57%), Gaps = 41/417 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L L +FG S++ LQKKAI + D+FVSMPTGA + + A V +P
Sbjct: 25 LADALTRVFGHKSYRSGLQKKAIEAVAQCGQDVFVSMPTGAGKSLCFQLPA---VVVPKD 81
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ++ +SP+++ + + K+ V + E I S + E + +
Sbjct: 82 SVTVV----------VSPLIALMTDQLQKLKSLNV-------RAETINSTMSSLERQRVR 124
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L + P +LLYVTPE+ +E F +L L + KL+ VVDEAHCVSEWGHDFRP Y
Sbjct: 125 RDLMSMSPETRLLYVTPEQVASEKFQAVLSALYKIGKLSRFVVDEAHCVSEWGHDFRPDY 184
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG++R + +P++ALTATA V DI+ L+ +P +FKTS+FR+NL+YDV F
Sbjct: 185 LKLGKVRDMFPD-VPMVALTATASAKVFDDILVQLRLRQPVAIFKTSSFRANLYYDVEFK 243
Query: 276 DLLKDSYAHVKEFIEKCLGK-----DNKANNCGIIYCRTREHTTDLADALRR-------- 322
+ L + + ++K F + LG+ D K GI+YCRTR+ +++ L
Sbjct: 244 EALDEPFENLKNFSIRALGEGWEEEDPKKRGSGIVYCRTRDACEEVSMKLTSLGLLTKPY 303
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER Q+ + RG++ +I AT+SFGMG+DR VRFV HW +P SIPAYYQESGR
Sbjct: 304 HGGMKAAERKENQDEWTRGQVPIIAATVSFGMGVDRAMVRFVAHWSVPQSIPAYYQESGR 363
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD---TSTKREQL--ELKFKNYLSMLEYCE 432
AGRDG SYCRIY+S +KS+ Y++K D TKR ++ E+ K + M YCE
Sbjct: 364 AGRDGRPSYCRIYYSRKDRKSITYLLKRDEQGAKTKRAKIVAEMATKAFEKMASYCE 420
>gi|195378226|ref|XP_002047885.1| GJ11681 [Drosophila virilis]
gi|194155043|gb|EDW70227.1| GJ11681 [Drosophila virilis]
Length = 1026
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 239/417 (57%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG SFK ELQ++A+ + + D++VSMPTG S +S PG I
Sbjct: 11 LEKFFGHKSFKSELQERAVTCAVKKKQDVYVSMPTG---------SGKSLCFQLPG--LI 59
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + S +D + + Q + + S + E + ++ +LR
Sbjct: 60 CEDQ-------LTIVFSPLLALIKDQIDHLAKLK---VQADSLNSKMSSKERERVIMDLR 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK +IK LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTKIKFLYITPEQAATKFFQELLHSLYKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + + +ALTATA V++DI L+ +P F T +FRSNL+YD+++ + ++
Sbjct: 170 ELRSKYPDVV-WLALTATASLEVREDIHKQLRLRQPVAHFSTPSFRSNLYYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNK-------ANNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ F + CLG + K CGIIYCRTR+ +A + ++
Sbjct: 229 DDFQHLAAFAQHCLGDEAKFKAEPKPKRGCGIIYCRTRDQVERVAVGVSKQGVGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTAERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E + + ++++CEQ
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAQRARGRGDRELLTERALRQFERIVDFCEQ 405
>gi|321476989|gb|EFX87948.1| DNA helicase RecQ5 [Daphnia pulex]
Length = 997
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/415 (40%), Positives = 234/415 (56%), Gaps = 44/415 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG FK LQK A+ ++ + D+FVSMPTG S +S +
Sbjct: 13 LEDKFGHTDFKSTLQKDAVLAVVQGSGDVFVSMPTG---------SGKSLC-------YQ 56
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L ++ R I+ S L D+ + R + E I S + + + +L+
Sbjct: 57 LPAVIKER---CVAIVVSPLLALITDQIEHLLKRKIV--AETINSKMLVEDKRRVCNDLK 111
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
P +LLY+TPE+A T +F +L HL ++ +++Y VVDEAHCVS+WGHDFRP Y +LG
Sbjct: 112 TKCPNTQLLYITPEQAATSTFQEILAHLHKHKQISYFVVDEAHCVSQWGHDFRPDYLKLG 171
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LR+ + IP IALTATA V++DI L P FKTS FRSNLFYD+ F +
Sbjct: 172 KLREKYMD-IPCIALTATATAQVEKDIYEQLSLKSPVARFKTSCFRSNLFYDIAFQNTSA 230
Query: 280 DSYAHVKEFIEKCLGKDN-----KANNCGIIYCRTREHTTDLADALRRK----------V 324
D + + + LG D K CGIIYCRTRE T LA+ L +K +
Sbjct: 231 DPETDLSLYASEWLGDDWDTQPLKTRPCGIIYCRTRESTGTLAEILTKKGIHTKAYHAGL 290
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ER+ VQ+ +M G+I VITATISFGMG+D+ +VRFV HW MP S+ YYQESGRAGRD
Sbjct: 291 KDRERAEVQDEWMTGKIPVITATISFGMGVDKASVRFVAHWCMPQSVAGYYQESGRAGRD 350
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTK-------REQLELKFKNYLSMLEYCE 432
G S CRI++S + ++E+++K D S K +Q + K+Y +M+ YCE
Sbjct: 351 GQPSGCRIFYSRKERNAVEFLLKQDVSKKTKKGAKYEKQAKQMMKSYEAMVRYCE 405
>gi|73965025|ref|XP_540436.2| PREDICTED: ATP-dependent DNA helicase Q5 [Canis lupus familiaris]
Length = 989
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 236/411 (57%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA + + A
Sbjct: 9 ERRVRSTLKKVFGFDSFKTPLQESATMAVVRGDKDVFVCMPTGAGKSLCYQLPA------ 62
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 63 -----LLAKG--------ITIVVSPLIALIQDQVDHLLALKVRVSSLNSKLSAQ---EKK 106
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 107 ELLSDLEREKPQTKLLYITPEMAASPSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 166
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P IALTATA V++D+ + L +P FKT FR+NLFYDV
Sbjct: 167 PDYLRLGTLRSRLAHA-PCIALTATATLQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 225
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDLADALR-RKVNKH- 327
F +LL D Y ++++F K LG K +K + CGI+YCRTRE LA L R VN
Sbjct: 226 QFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSYRGVNAKA 285
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 286 YHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 345
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 346 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKAAILAF 396
>gi|326930778|ref|XP_003211518.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Meleagris gallopavo]
Length = 1055
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 167/414 (40%), Positives = 231/414 (55%), Gaps = 43/414 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FGF+SFK LQ+ A ++ D+FV MPTGA G + + + G +
Sbjct: 25 LGKVFGFESFKTSLQESATMAVVRGEKDVFVCMPTGA----GKSLCYQLPAVLAVGITIV 80
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ +D ++ + L VS Q E K IL +L
Sbjct: 81 -----------ISPLIA----LIQDQVDHLLALKIKACSLNSKVSAQ---EKKTILADLA 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+IKLLY+TPE A SF L LV N L+Y+++DEAHCVS+WGHDFRP Y RLG
Sbjct: 123 NEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWGHDFRPDYLRLG 182
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR N+ P +ALTATA V++DI++ LK +P FKT FRSNLFYDV F +LL
Sbjct: 183 TLRSRIPNT-PCVALTATATKQVQEDIVTALKLKQPLATFKTPCFRSNLFYDVQFKELLT 241
Query: 280 DSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDLA----------DALRRKVNK 326
D YA++K+F K L N + CGI+YCR R+ LA A +
Sbjct: 242 DPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVKAKAYHAGLKA 301
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 302 ADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGK 361
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTS-------TKREQLELKFKNYLSMLEYCEQ 433
S CR+Y+S + + + ++IK + S T +E + + +++ +CE+
Sbjct: 362 PSCCRLYYSRNDRDQVSFLIKKELSKIQEKKGTLKESDKAAMTAFDAIVSFCEE 415
>gi|198465617|ref|XP_001353701.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
gi|198150241|gb|EAL29434.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
Length = 1034
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/416 (39%), Positives = 239/416 (57%), Gaps = 45/416 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG FK ELQ+KAI+ + + D++VSMPTG S +S PG +
Sbjct: 11 LRKHFGHSKFKSELQEKAIKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+ N ++ + S +D + + L S T E ++ +LR
Sbjct: 59 MCEN------QLTIVFSPLLALIKDQIDHLTKLKVPADSLN---SKMTLKERDRVIMDLR 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK +K LY+TPE+A T+ F LLQ L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR I +ALTATA V++DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRS-KYPEIVWLALTATASREVREDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLG--KDNKA-----NNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F + CLG K+ KA CGIIYCRTRE+ +A + ++
Sbjct: 229 DDFQHLADFAQHCLGDAKEFKAMPKPQRGCGIIYCRTRENVERVAVGVSKRGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTAERTGVQEAWMRGDQPIICATNSFGMGVDKASVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCE 432
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDIHRARGRGDKELLTERALKQFEKISEFCE 404
>gi|195454807|ref|XP_002074414.1| GK10589 [Drosophila willistoni]
gi|194170499|gb|EDW85400.1| GK10589 [Drosophila willistoni]
Length = 983
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/413 (38%), Positives = 231/413 (55%), Gaps = 45/413 (10%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG FK +LQ+KA+ + R D++VSMPTG S +S PG
Sbjct: 15 FGHTKFKSQLQEKAVNAAVKRKQDVYVSMPTG---------SGKSLCFQLPGL------- 58
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKP 163
R ++ + S +D + + Q + + S T E ++ +L+ VK
Sbjct: 59 --MRENQLTIVFSPLLALIKDQIDHLTKLK---IQADSLNSKMTVKERDRVIMDLKAVKT 113
Query: 164 RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ 223
IK LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFRP Y +LG+LR
Sbjct: 114 NIKFLYITPEQAATKFFQDLLQLLYKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLGDLR- 172
Query: 224 FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYA 283
+ +ALTATA V++DI L+ P F T +FR NLFYD+++ + ++D +
Sbjct: 173 IKYKDVVWLALTATASKEVREDIYKQLRLQTPVAQFSTPSFRRNLFYDIVYKNSIEDDFQ 232
Query: 284 HVKEFIEKCLGKDNK-------ANNCGIIYCRTREHTTDLADALRRK----------VNK 326
H+ EF CLG + CGIIYCRTR+ +A + ++ +
Sbjct: 233 HLAEFAHHCLGDPKEFKGTPKSQRGCGIIYCRTRDQVERVAVGVSKQGVGAVAYHAGLKT 292
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
ER++VQES+M G +I AT SFGMG+D+ +VRFV+HW P +I AYYQESGRAGRDGL
Sbjct: 293 AERTQVQESWMEGVHPIICATNSFGMGVDKPSVRFVIHWDCPQNIAAYYQESGRAGRDGL 352
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
QSYCR+Y+ KS+ ++++ D+ R + E K + ++++CE+
Sbjct: 353 QSYCRLYYGREDVKSIRFLLQQDSQRARGRGDRELLTERALKQFEKIVDFCER 405
>gi|354489423|ref|XP_003506862.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Cricetulus griseus]
Length = 411
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/411 (39%), Positives = 238/411 (57%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVKGDKDVFVCMPTGA----GKSLCYQLPALL 68
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++ + + L +S Q E K
Sbjct: 69 AKGITIV-----------VSPLIA----LIQDQVDHLLALKVQVSSLNSKLSVQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L L+ N L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 QLLSDLERDKPRTKLLYITPEMAASASFQPTLNSLMSRNLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLAHA-PCVALTATATPQVQEDVFASLHLKQPVASFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDLADAL-RRKVNKH- 327
F +L+ D Y ++++F K LG K +K + CGI+YCRTRE +A L R VN
Sbjct: 230 QFKELIPDLYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQVAVELSSRGVNAKA 289
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+R++VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 290 YHAGLKAPDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 349
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + ++I+ + +E+ K + ++L +
Sbjct: 350 RAGRDGKPSWCRLYYSRSDRDQVSFLIRKEIDKLQEKRGSKPSDKATLLAF 400
>gi|23503567|dbj|BAC20378.1| RECQL5 protein [Gallus gallus]
Length = 446
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 220/390 (56%), Gaps = 36/390 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FGF+SFK LQ+ A ++ D+FV MPTGA G + + + G +
Sbjct: 25 LGKVFGFESFKTSLQESATMAVVRGEKDVFVCMPTGA----GKSLCYQLPAVLAVGITIV 80
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ +D T ++ + L +S Q E K IL +L
Sbjct: 81 -----------ISPLIA----LIQDQGTHLLALKIKACSLNSKLSAQ---EKKTILADLA 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+IKLLY+TPE A SF L LV N L+Y+++DEAHCVS+WGHDFRP Y RLG
Sbjct: 123 SEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWGHDFRPDYLRLG 182
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR N+ P +ALTATA + DI++ LK +P FKT FRSNLFYDV F +LL
Sbjct: 183 TLRTRIPNT-PCVALTATATKQDQDDIVTALKLKQPLATFKTPCFRSNLFYDVQFKELLT 241
Query: 280 DSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDLA----------DALRRKVNK 326
D YAH+K+F K L N + CGI+YCR R+ LA A +
Sbjct: 242 DPYAHLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVKAKAYHAGLKA 301
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 302 ADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGK 361
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
CR+Y+S + + + ++IK + S +E+
Sbjct: 362 PPCCRLYYSRNDRDQVSFLIKKELSKIQEK 391
>gi|195172475|ref|XP_002027023.1| GL20982 [Drosophila persimilis]
gi|194112795|gb|EDW34838.1| GL20982 [Drosophila persimilis]
Length = 1017
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 164/416 (39%), Positives = 239/416 (57%), Gaps = 45/416 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG FK ELQ+KAI+ + + D++VSMPTG S +S PG +
Sbjct: 11 LRKHFGHSKFKSELQEKAIKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+ N ++ + S +D + + L S T E ++ +LR
Sbjct: 59 MCEN------QLTIVFSPLLALIKDQIDHLTKLKVPADSLN---SKMTLKERDRVIMDLR 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK +K LY+TPE+A T+ F LLQ L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR I +ALTATA V++DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRS-KYPEIVWLALTATASREVREDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLG--KDNKA-----NNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F + CLG K+ KA CGIIYCRTRE+ +A + ++
Sbjct: 229 DDFQHLADFAQHCLGDAKEFKAMPKPQRGCGIIYCRTRENVERVAVGVSKRGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTAERTGVQEAWMRGDQPIICATNSFGMGVDKASVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCE 432
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDIHRARGRGDKELLTERALKQFEKISEFCE 404
>gi|363740670|ref|XP_001233565.2| PREDICTED: ATP-dependent DNA helicase Q5 [Gallus gallus]
Length = 1052
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 221/390 (56%), Gaps = 36/390 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FGF+SFK LQ+ A ++ D+FV MPTGA G + + + G +
Sbjct: 25 LGKVFGFESFKTSLQESATMAVVRGEKDVFVCMPTGA----GKSLCYQLPAVLAVGITIV 80
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ +D ++ + L +S Q E K IL +L
Sbjct: 81 -----------ISPLIA----LIQDQVDHLLALKIKACSLNSKLSAQ---EKKTILADLA 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+IKLLY+TPE A SF L LV N L+Y+++DEAHCVS+WGHDFRP Y RLG
Sbjct: 123 SEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWGHDFRPDYLRLG 182
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR N+ P +ALTATA V+ DI++ LK +P FKT FRSNLFYDV F +LL
Sbjct: 183 TLRTRIPNT-PCVALTATATKQVQDDIVTALKLKQPLATFKTPCFRSNLFYDVQFKELLT 241
Query: 280 DSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDL----------ADALRRKVNK 326
D YA++K+F K L N + CGI+YCR R+ L A A +
Sbjct: 242 DPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVKAKAYHAGLKA 301
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 302 ADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGK 361
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
S CR+Y+S + + + ++IK + S +E+
Sbjct: 362 PSCCRLYYSRNDRDQVSFLIKKELSKIQEK 391
>gi|156363725|ref|XP_001626191.1| predicted protein [Nematostella vectensis]
gi|156213059|gb|EDO34091.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 237/417 (56%), Gaps = 41/417 (9%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L L+ +F F FK ELQ++A + D+FVSMPTG+ G + + + P
Sbjct: 4 DLKKTLRNVFKFREFKSELQQRACETVSKGLQDVFVSMPTGS----GKSLCYQLPAVVAP 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G I+ + S +D T + T + +E + S ++E K +
Sbjct: 60 G---------------ITIVFSPLIALIQDQVTYLRTLK---ITVETLNSKLPESERKRV 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+++L VKP +KLLY+TPE A T F +L L + L+ VDEAHCVS+WGHDFRP
Sbjct: 102 MKDLYFVKPTVKLLYITPELAATPGFQKVLDSLYKRKLLSLFAVDEAHCVSQWGHDFRPD 161
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y RLG+LR + +ALTATA VK+DI++ L VFK+ +R NL+YD+ F
Sbjct: 162 YLRLGKLRN-KYKDVAWVALTATATSRVKEDILTALHMQSNVAVFKSQCYRPNLYYDISF 220
Query: 275 DDLLKDSYAHVKEFIEKCLGKDN--KANNCGIIYCRTREHTTDLADALRRK--------- 323
+LL+D YA +K+F + L ++ +A GIIYCRTR+ ++A L RK
Sbjct: 221 KELLEDPYADLKQFADAALEDEDSGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKPYHA 280
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ +R +VQ+ +M G++ VI ATISFGMG+D+ +VRFV HW +P S+ YYQESGRAG
Sbjct: 281 GLKSDKRDKVQQEWMEGKVAVICATISFGMGVDKGDVRFVAHWSLPQSMEGYYQESGRAG 340
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
RDG SYCR+Y+S + + ++IK D + ++ KN + +++EYCE+
Sbjct: 341 RDGQPSYCRLYYSRAERDQVLFLIKNDMKKRLKKANAAQKNKAVQVSFQAVVEYCEE 397
>gi|290490730|dbj|BAI79325.1| RecQ5 helicase [Gallus gallus]
Length = 1052
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/390 (41%), Positives = 221/390 (56%), Gaps = 36/390 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FGF+SFK LQ+ A ++ D+FV MPTGA G + + + G +
Sbjct: 25 LGKVFGFESFKTSLQESATMAVVRGERDVFVCMPTGA----GKSLCYQLPAVLAVGITIV 80
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ +D ++ + L +S Q E K IL +L
Sbjct: 81 -----------ISPLIA----LIQDQVDHLLALKIKACSLNSKLSAQ---EKKTILADLA 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+IKLLY+TPE A SF L LV N L+Y+++DEAHCVS+WGHDFRP Y RLG
Sbjct: 123 SEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWGHDFRPDYLRLG 182
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR N+ P +ALTATA V+ DI++ LK +P FKT FRSNLFYDV F +LL
Sbjct: 183 TLRTRIPNT-PCVALTATATKQVQDDIVTALKLKQPLATFKTPCFRSNLFYDVQFKELLT 241
Query: 280 DSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDL----------ADALRRKVNK 326
D YA++K+F K L N + CGI+YCR R+ L A A +
Sbjct: 242 DPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVKAKAYHAGLKA 301
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 302 ADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGK 361
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
S CR+Y+S + + + ++IK + S +E+
Sbjct: 362 PSCCRLYYSRNDRDQVSFLIKKELSKIQEK 391
>gi|224075156|ref|XP_002190226.1| PREDICTED: ATP-dependent DNA helicase Q5 [Taeniopygia guttata]
Length = 1087
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 162/390 (41%), Positives = 223/390 (57%), Gaps = 36/390 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FGF+SFK LQ+ A ++ D+FV MPTGA G + + + G +
Sbjct: 63 LQKVFGFESFKTSLQESATMAVVRGEKDVFVCMPTGA----GKSLCYQLPAVLAVGITIV 118
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ +D ++ + L +S Q E K IL +L
Sbjct: 119 -----------ISPLIA----LIQDQVDHLLALKIKACSLNSKLSAQ---EKKTILADLA 160
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP++KLLY+TPE A SF L LV N L+Y+V+DEAHCVS+WGHDFRP Y RLG
Sbjct: 161 SEKPQVKLLYITPEMAAASSFQPTLNSLVSRNLLSYLVIDEAHCVSQWGHDFRPDYLRLG 220
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR ++ P +ALTATA V++D+++ LK +P FKT FRSNLFYDV F +LL
Sbjct: 221 SLRSRIPHT-PCVALTATATKQVQEDVVAALKLKQPLSTFKTPCFRSNLFYDVQFKELLT 279
Query: 280 DSYAHVKEFIEKCL---GKDNKANNCGIIYCRTREHTTDL----------ADALRRKVNK 326
D YA++K+F K L G + CGI+YCR R+ L A A +
Sbjct: 280 DPYANLKDFCLKALEVKGATGVYSGCGIVYCRMRDVCDQLAIELSYRGLKAKAYHAGLKA 339
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
ER+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 340 AERTSVQNEWMEEKIPVIVATISFGMGVDKGNVRFVAHWNIAKSMAGYYQESGRAGRDGK 399
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
S CR+Y+S + + + ++IK + S +E+
Sbjct: 400 PSCCRLYYSRNDRDQVSFLIKKELSNIQEK 429
>gi|195129147|ref|XP_002009020.1| GI13816 [Drosophila mojavensis]
gi|193920629|gb|EDW19496.1| GI13816 [Drosophila mojavensis]
Length = 1052
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/417 (37%), Positives = 241/417 (57%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG FK ELQ++AI + + D++VSMPTG S +S PG +
Sbjct: 11 LEKFFGHKGFKSELQQRAITCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+ N ++ + S +D + + Q + + S + E + ++ +LR
Sbjct: 59 MCEN------QLTIVFSPLLALIKDQIDHLAKLK---VQADSLNSKMSTKERERVIMDLR 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+K IK LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AIKTNIKFLYITPEQAATKFFQDLLHSLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LR + + +ALTATA V++DI L+ +P F T +FRSNL+YD+++ + ++
Sbjct: 170 DLRAKYPDVV-WLALTATASKEVREDIYKQLRLRQPVAQFSTPSFRSNLYYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNK-------ANNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ F + CLG +++ CGIIYCRTR+ +A + ++
Sbjct: 229 DDFHHLATFAQHCLGDESEFKATPKAKRGCGIIYCRTRDQVERVAVGVSKQGVGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTAERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTST-----KREQL-ELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D RE L E + + ++++CEQ
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAQRARGRGDREMLTERALRQFERIVDFCEQ 405
>gi|328787553|ref|XP_624695.3| PREDICTED: ATP-dependent DNA helicase Q5 [Apis mellifera]
Length = 849
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 233/422 (55%), Gaps = 39/422 (9%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVS 85
+K + ++ L+ LK++FG+D FK ++QK+A I D+FV MPTG+
Sbjct: 6 KKSNLLEDKMLSTVLKSVFGYDDFKSDIQKQATSAIYKGKQDVFVCMPTGS--------- 56
Query: 86 ARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG 145
G + I+ + S ++ +++ + + L S
Sbjct: 57 ---------GKSLCFQLPALMKKDKITIVFSPLLALMKNQIDFLISKKINASSLN---SN 104
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+ E AI+++L P+IKLLYVTPE + F ++ L + L+Y V+DEAHC+S
Sbjct: 105 TSSKERNAIIKDLTSNSPKIKLLYVTPEMGAQQHFQDIIIKLNKKKTLSYFVIDEAHCLS 164
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
+WGHDFRP+YR+LG ++ N IPIIALTATA VK DI+ L P +F FR
Sbjct: 165 QWGHDFRPSYRQLGIFKKLCPN-IPIIALTATAAKEVKDDILQCLNMKNP-AIFSVPVFR 222
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADAL 320
SNL+YDV F ++L + H+K FI + LG +K+ CGIIYCR +E T +A L
Sbjct: 223 SNLYYDVWFLEILDKPFEHLKNFIIESLGCQDKSIPKVKKGCGIIYCRKKEATEIIAHKL 282
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ ER+ VQ + GE+ VI AT SFGMG+D+ +VRFVVHW +P +
Sbjct: 283 SNSGISTLAYHAGLKNQERNEVQNKWTSGEVPVIAATCSFGMGVDKGSVRFVVHWTVPQN 342
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-ELKFKNYLSMLE 429
I AYYQESGRAGRDG ++CRIY S + ++IK + + K +L +L++KN+ +
Sbjct: 343 IAAYYQESGRAGRDGKPAFCRIYFSNEEYAPIAFLIKEEITKKNSELVKLRWKNFEKTVS 402
Query: 430 YC 431
YC
Sbjct: 403 YC 404
>gi|348533151|ref|XP_003454069.1| PREDICTED: ATP-dependent DNA helicase Q5 [Oreochromis niloticus]
Length = 1040
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 236/422 (55%), Gaps = 53/422 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FGFDSF+ +LQ+ ++ + D+FV MPTGA G + + + G
Sbjct: 5 LKQALKTHFGFDSFRSKLQEDVVKAVHRGDRDVFVCMPTGA----GKSLCYQLPAVLAEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSD-LYQLEL----IVSGQTKTE 150
+ ISP+++ ++ + D L +L + I S E
Sbjct: 61 ITLV-----------ISPLIA------------LIQDQVDHLKELNIPACSINSKLLANE 97
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ IL +L P++KLLY+TPE + SFH L L L+Y+ VDEAHCVS+WGHD
Sbjct: 98 RRLILADLGSSNPKLKLLYITPEMVASPSFHPCLMDLCSRGLLSYLAVDEAHCVSQWGHD 157
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y +LGELR +P +ALTATA +V++DII LK + P F T FRSNL Y
Sbjct: 158 FRPDYLKLGELRARL-QGVPCLALTATAPKNVQEDIIQSLKLSSPLS-FLTPVFRSNLHY 215
Query: 271 DVIFDDLLKDSYAHVKEFIEKCL--GKDNKANNCGIIYCRTREHTTDLADALRR------ 322
DVIF +LL + Y H+ FI+K L G + CGI+YCRTRE +A L +
Sbjct: 216 DVIFRELLPNPYVHLHAFIKKTLSLGAGSNGQGCGIVYCRTREGCETVAHQLTKLGVVAK 275
Query: 323 ----KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ +R+ VQ +M+G++ VI ATISFGMG+D+ NVRFV HW + S+ +YYQES
Sbjct: 276 PYHAGLKPTDRTGVQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLASYYQES 335
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-------ELKFKNYLSMLEYC 431
GRAGRDGL S CR Y+S K+ + ++I+ + + K+E+ + ++ +M+ +C
Sbjct: 336 GRAGRDGLPSACRTYYSPRDKEQINFLIRQEVARKQEKRGFAKDSDKTAMTDFEAMVSFC 395
Query: 432 EQ 433
EQ
Sbjct: 396 EQ 397
>gi|327265015|ref|XP_003217304.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Anolis carolinensis]
Length = 1026
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 164/390 (42%), Positives = 227/390 (58%), Gaps = 36/390 (9%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGFDSFK LQK A ++ D+F+ MPTGA G + + + G +
Sbjct: 16 LKNVFGFDSFKTPLQKNATLTVVKGDKDVFICMPTGA----GKSLCYQLPAVLAAGITIV 71
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D +++ + + L +S Q E KAI+ +L
Sbjct: 72 -----------VSPLIA----LIQDQVDHLLSLKVRVSSLNSKISVQ---ERKAIITDLM 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
P+ KLLY+TPE A + SF L+ LV + L+Y++VDEAHCVS+WGHDFRP Y RLG
Sbjct: 114 SDTPKTKLLYITPEMASSSSFQPTLEVLVSRSLLSYLIVDEAHCVSQWGHDFRPDYLRLG 173
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR N+ P IALTATA V+ DII+ LK P FKT FRSNLFYDV + +LL
Sbjct: 174 SLRCRIPNT-PCIALTATATKRVQDDIIASLKLKLPVTTFKTPCFRSNLFYDVQYKELLT 232
Query: 280 DSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDLA-----DALRRK-----VNK 326
D Y ++K+F LGK + + + CGIIYCR RE +A LR K +
Sbjct: 233 DPYENLKDFCLNSLGKHDISGAYSGCGIIYCRMREVCEQVAIELNYRGLRAKAYHAGLKA 292
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
ER+ VQ +M ++ +I ATISFGMG+D+ NVRFV HW +P S+ YYQESGRAGRDG
Sbjct: 293 AERTSVQSEWMEEKVQIIVATISFGMGVDKANVRFVAHWNIPKSMAGYYQESGRAGRDGK 352
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
S CR+Y+S + + ++IK + + +E+
Sbjct: 353 PSSCRLYYSRADRDQVSFLIKKEIAKLQEK 382
>gi|340723100|ref|XP_003399935.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Bombus terrestris]
Length = 1011
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/412 (37%), Positives = 228/412 (55%), Gaps = 39/412 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ LK++FG+D FK ++QK+A + D+FV MPTG+ G
Sbjct: 2 LSVVLKSIFGYDDFKSDIQKQATTAVYKAKQDVFVCMPTGS------------------G 43
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ I+ + S ++ +++ + + L S + +T AI+
Sbjct: 44 KSLCFQLPALMKEDKITIVFSPLLALIKNQVDFLISKKVNANSLNSTTSTKERT---AIM 100
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++L P+IKLLYVTPE + F + L + L+Y VVDEAHC+S+WGHDFRP+Y
Sbjct: 101 KDLASNSPKIKLLYVTPEMGAQQHFQATITRLNKIKALSYFVVDEAHCLSQWGHDFRPSY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R LG+ ++ N IPIIALTATA VK DI+ L P +F FR NL+YDV F
Sbjct: 161 RELGKFKKLCPN-IPIIALTATAAKEVKDDILQCLNMKNPA-IFSVPVFRPNLYYDVWFL 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADALRRK------- 323
++L + H++ F+ + L +++ NCGIIYCR +E T +A L
Sbjct: 219 EILDKPFEHLRNFVIEALNSQDRSIPKAKKNCGIIYCRKKEATEIIAHKLSSSGIPALAY 278
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER+ VQ + GE+ VI AT SFGMG+D+ +VRFVVHW +P +I AYYQESGR
Sbjct: 279 HAGLKNQERNEVQNKWTSGEVPVIAATCSFGMGVDKGSVRFVVHWTVPQNIAAYYQESGR 338
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-ELKFKNYLSMLEYC 431
AGRDG ++CRIY S ++ ++IK + + K+ +L +L +KN+ + YC
Sbjct: 339 AGRDGKPAFCRIYFSNKEYSAIAFLIKEEVTRKKSELVKLNWKNFEKTVSYC 390
>gi|449283029|gb|EMC89732.1| ATP-dependent DNA helicase Q5 [Columba livia]
Length = 1016
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 161/403 (39%), Positives = 227/403 (56%), Gaps = 36/403 (8%)
Query: 27 KGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+G + E + L+ +FGF++FK LQ+ A + D+FV MPTGA G +
Sbjct: 4 EGAQGLEGRVRKTLRRVFGFETFKTSLQESATMTVARGEKDVFVCMPTGA----GKSLCY 59
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ + G + ISP+++ +D ++ + L +S Q
Sbjct: 60 QLPAVLAVGITIV-----------ISPLIA----LIQDQVDHLLALKIKACSLNSKLSAQ 104
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
E K IL +L KP++KLLY+TPE A SF L LV N L+Y+++DEAHCVS+
Sbjct: 105 ---EKKTILADLASEKPQVKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQ 161
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP Y RLG LR N+ P +ALTATA V++DI++ LK +P FKT FRS
Sbjct: 162 WGHDFRPDYLRLGTLRTRIPNT-PCVALTATATKQVQEDIVAALKLKQPLSTFKTPCFRS 220
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA---NNCGIIYCRTREHTTDL------- 316
NLFYDV F +LL D Y ++K+F K L N + + CGI+YCR R+ L
Sbjct: 221 NLFYDVQFKELLTDPYTNLKDFCLKALEVKNSSGVYSGCGIVYCRMRDVCDQLAIELSYR 280
Query: 317 ---ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
A A + +R+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+
Sbjct: 281 GVKAKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAG 340
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
YYQESGRAGRDG S CR+Y+S + + + ++IK + + +E+
Sbjct: 341 YYQESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELANIQEK 383
>gi|350425370|ref|XP_003494100.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Bombus impatiens]
Length = 1010
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/412 (37%), Positives = 227/412 (55%), Gaps = 39/412 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ LK++FG+D FK ++QK+A + D+FV MPTG+ G
Sbjct: 2 LSVVLKSVFGYDDFKSDIQKQATTAVYKAKQDVFVCMPTGS------------------G 43
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ I+ + S ++ +++ + + L S + E AI+
Sbjct: 44 KSLCFQLPALMKEDKITIVFSPLLALIKNQVDFLISKKVNANSLN---SNTSTKERNAIM 100
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++L P+IKLLYVTPE + F + L + L+Y VVDEAHC+S+WGHDFRP+Y
Sbjct: 101 KDLASNSPKIKLLYVTPEMGAQQHFQATITRLNKIKALSYFVVDEAHCLSQWGHDFRPSY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R LG+ ++ N IPIIALTATA VK DI+ L P +F FR NL+YDV F
Sbjct: 161 RELGKFKKLCPN-IPIIALTATAAKEVKDDILQCLNMKNPA-IFSVPVFRPNLYYDVWFL 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADALRRK------- 323
++L + H++ F+ + L +K+ NCGIIYCR +E T +A L
Sbjct: 219 EILDKPFEHLRNFVIEALDSQDKSIPKAKKNCGIIYCRKKEATEIIAHKLSSSGIPALAY 278
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER+ VQ + GE+ +I AT SFGMG+D+ +VRFVVHW +P +I AYYQESGR
Sbjct: 279 HAGLKNQERNEVQNKWTSGEVPIIAATCSFGMGVDKGSVRFVVHWTVPQNIAAYYQESGR 338
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-ELKFKNYLSMLEYC 431
AGRDG ++CRIY S ++ ++IK + + K+ +L +L +KN+ + YC
Sbjct: 339 AGRDGKPAFCRIYFSNKEYSAIAFLIKEEITRKKSELVKLNWKNFEKTVSYC 390
>gi|195494335|ref|XP_002094796.1| GE20014 [Drosophila yakuba]
gi|194180897|gb|EDW94508.1| GE20014 [Drosophila yakuba]
Length = 1069
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 242/417 (58%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK ELQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSELQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK +K LY+TPE+A T+ F LLQ L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTSLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYPDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLG-----KDNKANN--CGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG KD + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGDPKEFKDTPKSQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ KS+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVKSIRFLLQNDAHRARGRGDKELLTERAVKQFEKITEFCER 405
>gi|260806927|ref|XP_002598335.1| hypothetical protein BRAFLDRAFT_119181 [Branchiostoma floridae]
gi|229283607|gb|EEN54347.1| hypothetical protein BRAFLDRAFT_119181 [Branchiostoma floridae]
Length = 425
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/393 (40%), Positives = 225/393 (57%), Gaps = 44/393 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHIL-LRT----HDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
LK +F D F+ E Q+ A R ++ RT D+++SMPTGA G + + + P
Sbjct: 11 LKDVFKHDEFRSEAQENATRAVVRARTCSGRKDVYISMPTGA----GKSLCYQLPAVMAP 66
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ + + + S + S + + K +
Sbjct: 67 GITMV-----------VSPLIALMQDQLEHLRKLNICAES-------LNSKLSAKDRKRV 108
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L +LR KP+ KLLY+TPE A T F LL+ L LA++ VDEAHCVS+WGHDFRP
Sbjct: 109 LADLRSSKPKTKLLYITPELAATPGFQQLLETLKSRKLLAHLAVDEAHCVSQWGHDFRPD 168
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y +LG LR+ +P IALTATA +V++DII+ L +P + FKTS FR NLFYDV +
Sbjct: 169 YLKLGSLREKL-EDVPCIALTATATSAVQKDIINSLHLQEPVQKFKTSVFRPNLFYDVKY 227
Query: 275 DDLLKDSYAHVKEFIEKCLGKDN------KANNCGIIYCRTREHTTDLADALRRK----- 323
++L D Y +K+F K LG++ CGI+YCRTR+ T++A L +K
Sbjct: 228 KEVLDDPYEDLKDFAVKALGEEGVEPVKGPHKGCGIVYCRTRDGCTEVAARLTKKGLLSK 287
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ R VQ +M G++ VI ATISFGMG+D+ VRFV HW +P S+ YYQES
Sbjct: 288 AYHAGLKDSTREEVQMDWMEGKVPVIVATISFGMGVDKATVRFVAHWNIPKSMAGYYQES 347
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS 411
GRAGRDG Q++CR+Y+S H + + ++IK D S
Sbjct: 348 GRAGRDGKQAFCRLYYSRHERDQVCFLIKQDIS 380
>gi|157786722|ref|NP_001099323.1| ATP-dependent DNA helicase Q5 [Rattus norvegicus]
gi|149054808|gb|EDM06625.1| RecQ protein-like 5 (predicted) [Rattus norvegicus]
Length = 973
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 167/411 (40%), Positives = 240/411 (58%), Gaps = 36/411 (8%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ AI ++ D+FV MPTGA + + A
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESAIMAVVKGDKDVFVCMPTGAGKSLCYQLPA------ 66
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G I+ ++S +D ++ + + L +S Q E K
Sbjct: 67 -----VLAKG--------ITIVVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQ---ERK 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KPR KLLY+TPE A + SF L L+ N L+Y+VVDEAHCVS+WGHDFR
Sbjct: 111 ELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHCVSQWGHDFR 170
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 171 PDYLRLGALRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVASFKTPCFRANLFYDV 229
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DN-KANNCGIIYCRTREHTTDLADAL-RRKVNKH- 327
F +L+ D Y ++++F K LG+ DN ++ CGI+YCRTRE LA L R VN
Sbjct: 230 QFKELIPDVYGNLRDFCLKALGQKADNGSSSGCGIVYCRTREACEQLAIELSSRGVNAKA 289
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER++VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 290 YHAGLKASERTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 349
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 350 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKLQEKRGNKPSDKATLLAF 400
>gi|194870876|ref|XP_001972738.1| GG13718 [Drosophila erecta]
gi|190654521|gb|EDV51764.1| GG13718 [Drosophila erecta]
Length = 1068
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/417 (38%), Positives = 240/417 (57%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK ELQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSELQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK +K LY+TPE+A T+ F LLQ L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYTDVI-WLALTATASSEVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNK-------ANNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGDPKEFKEAPKSQRGCGIVYCRTRDQVERMAIGVTKQGVGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|24664226|ref|NP_729983.1| homolog of RecQ, isoform B [Drosophila melanogaster]
gi|6573299|dbj|BAA88313.1| DNA helicase RECQE [Drosophila melanogaster]
gi|23093483|gb|AAN11801.1| homolog of RecQ, isoform B [Drosophila melanogaster]
Length = 1058
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 242/417 (58%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK +LQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|432870056|ref|XP_004071785.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Oryzias latipes]
Length = 989
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 236/418 (56%), Gaps = 45/418 (10%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FGF++F+ +LQ+ I+ +L D+FV MPTGA G + + + G
Sbjct: 4 LKQALKTHFGFNNFRSKLQEDVIKAVLKGDRDVFVCMPTGA----GKSLCYQLPAMLAEG 59
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + K + S I S E + IL
Sbjct: 60 ITLV-----------ISPLIALIQDQVNHLKELNIPACS-------INSKLNVGERRLIL 101
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L P++KLLY+TPE + SF L L + L+Y+ VDEAHCVS+WGHDFRP Y
Sbjct: 102 ADLGSSSPKLKLLYITPEMVASPSFQPCLTDLCSRSLLSYVAVDEAHCVSQWGHDFRPDY 161
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
+LGELR + G +P +ALTATA +V++DI+ L+ + P F T FRSNL+YDVIF
Sbjct: 162 LKLGELRARMPG--VPCLALTATAPKNVQEDIVKSLRLSSPLS-FVTPVFRSNLYYDVIF 218
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANN--CGIIYCRTREHTTDLADALRR---------- 322
DLL + Y H+ FI K L +N +N CGI+YCRTRE +A L +
Sbjct: 219 RDLLPNPYVHLHAFIRKALEMENGSNGQGCGIVYCRTREGCETVAYQLTKLGVLAKPYHA 278
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ +R+ Q +M+G++ VI ATISFGMG+D+ NVRFV HW + S+ +YYQESGRAG
Sbjct: 279 GLKAGDRTEAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAG 338
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-------ELKFKNYLSMLEYCEQ 433
RDGL S CR Y+S K+ + ++I+ + + ++E+ + ++ +M+ +CEQ
Sbjct: 339 RDGLPSSCRTYYSPKDKEQINFLIRQEVNRRQEKRGSAKESDKSAITDFEAMVLFCEQ 396
>gi|5410427|gb|AAD43051.1|AF134239_1 Recq helicase 5 [Drosophila melanogaster]
Length = 1057
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 242/417 (58%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK +LQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|6567200|dbj|BAA88312.1| DNA helicase RECQE [Drosophila melanogaster]
Length = 1058
Score = 287 bits (734), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 242/417 (58%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK +LQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|189182194|gb|ACD81873.1| RE21659p [Drosophila melanogaster]
Length = 1058
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 242/417 (58%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK +LQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|194747940|ref|XP_001956407.1| GF25191 [Drosophila ananassae]
gi|190623689|gb|EDV39213.1| GF25191 [Drosophila ananassae]
Length = 1091
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/416 (38%), Positives = 233/416 (56%), Gaps = 45/416 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK ELQ+KA+ + + D++VSMPTG S +S PG +
Sbjct: 11 LKEHFGHSKFKSELQQKAVECAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+ N I+ + S +D + + L +S TK ++ I++ LR
Sbjct: 59 MCEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LR 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
VK ++ LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVKTTLRFLYITPEQAATKFFQELLHTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA V++DI L+ +P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYPD-ITWLALTATASKEVREDIYKQLRLKQPVAQFTTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLG-------KDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F C G + CGI+YCRTRE +A + ++
Sbjct: 229 DDFQHLADFARHCFGDPKEFKEQSKPQRGCGIVYCRTREQVERMAIGVTKQGIAAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTAERTEVQEAWMRGDKPIICATNSFGMGVDKATVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR-----EQL-ELKFKNYLSMLEYCE 432
RDGL S+CR+Y+ +S+ ++++ D R E L E K + + E+CE
Sbjct: 349 RDGLPSFCRLYYGREDVRSIRFLLQNDAQRARGRGDKEMLTERALKQFEKITEFCE 404
>gi|196005803|ref|XP_002112768.1| hypothetical protein TRIADDRAFT_25695 [Trichoplax adhaerens]
gi|190584809|gb|EDV24878.1| hypothetical protein TRIADDRAFT_25695 [Trichoplax adhaerens]
Length = 388
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/394 (40%), Positives = 235/394 (59%), Gaps = 40/394 (10%)
Query: 39 KLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADF 98
KLK +FG+DSFK +Q+KA+ I R D+FVSMPTG G + + + PG
Sbjct: 14 KLKTVFGYDSFKSPVQEKAVIEIAARKTDVFVSMPTGG----GKSLCYQLPAILHPGVTV 69
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL 158
+ SP+++ Y + + + ++ I S +T+ A++++L
Sbjct: 70 VF-----------SPLIALIYDQIDHLQNVGICSKT-------INSKMAETDRNAVIKDL 111
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+P I+LLYVTPE A T F LL+HL ++L Y +DEAHCVS WGHDFRP YR+L
Sbjct: 112 HDPEPTIRLLYVTPELAATSDFKRLLKHLFDRSRLNYFTIDEAHCVSHWGHDFRPDYRKL 171
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G LR++ S+PIIALTATA +V++D+I L F ++ F++S FRSNL+YDVIF DLL
Sbjct: 172 GNLREYF-PSVPIIALTATANKTVQEDVIKSLHFRSSFQSFRSSCFRSNLYYDVIFKDLL 230
Query: 279 KDSYAHVKEFIEKCLG-----KDNKANNCGIIYCRTREHTTDLADAL----------RRK 323
D+ +++ F+ + + CGIIYCRTR+ +++D L
Sbjct: 231 TDALDNLRNFVLSSISGSIALNSTSSQGCGIIYCRTRDDCDNISDKLAGYGISCKSYHAG 290
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R ++Q +M G + VI ATISFGMG+D+ +VRFV HW +P S+ +YYQESGRAGR
Sbjct: 291 LSGKIREQIQREWMDGIVKVIVATISFGMGVDKASVRFVAHWCLPKSMESYYQESGRAGR 350
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
DG ++CR+Y+S + ++Y++K + KR+ L
Sbjct: 351 DGKLAFCRLYYSREERNVVQYLLKKE--VKRQSL 382
>gi|5410428|gb|AAD43052.1|AF134239_2 Recq helicase 5 [Drosophila melanogaster]
Length = 468
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 244/424 (57%), Gaps = 45/424 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + LK FG FK +LQ+KA++ + + D++VSMPTG S +S
Sbjct: 4 ESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQ 54
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG +++ N I+ + S +D + + L +S TK ++
Sbjct: 55 LPG---LMSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I++ L+ V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFR
Sbjct: 104 VIMD-LKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFR 162
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LGELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+
Sbjct: 163 PDYLKLGELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDI 221
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK-- 323
++ + ++D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 222 VYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGI 281
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYY
Sbjct: 282 GAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYY 341
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLE 429
QESGRAGRDGLQSYCR+Y+ +S+ ++++ D R + E K + + E
Sbjct: 342 QESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITE 401
Query: 430 YCEQ 433
+CE+
Sbjct: 402 FCER 405
>gi|5410429|gb|AAD43053.1|AF134239_3 Recq helicase 5 [Drosophila melanogaster]
Length = 470
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 244/424 (57%), Gaps = 45/424 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + LK FG FK +LQ+KA++ + + D++VSMPTG S +S
Sbjct: 4 ESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQ 54
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG +++ N I+ + S +D + + L +S TK ++
Sbjct: 55 LPG---LMSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I++ L+ V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFR
Sbjct: 104 VIMD-LKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFR 162
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LGELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+
Sbjct: 163 PDYLKLGELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDI 221
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK-- 323
++ + ++D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 222 VYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGI 281
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYY
Sbjct: 282 GAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYY 341
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLE 429
QESGRAGRDGLQSYCR+Y+ +S+ ++++ D R + E K + + E
Sbjct: 342 QESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITE 401
Query: 430 YCEQ 433
+CE+
Sbjct: 402 FCER 405
>gi|62472181|ref|NP_001014584.1| homolog of RecQ, isoform C [Drosophila melanogaster]
gi|61678462|gb|AAX52745.1| homolog of RecQ, isoform C [Drosophila melanogaster]
Length = 468
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/424 (37%), Positives = 244/424 (57%), Gaps = 45/424 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + LK FG FK +LQ+KA++ + + D++VSMPTG S +S
Sbjct: 4 ESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQ 54
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG +++ N I+ + S +D + + L +S TK ++
Sbjct: 55 LPG---LMSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I++ L+ V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFR
Sbjct: 104 VIMD-LKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFR 162
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LGELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+
Sbjct: 163 PDYLKLGELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDI 221
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK-- 323
++ + ++D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 222 VYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGI 281
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYY
Sbjct: 282 GAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYY 341
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLE 429
QESGRAGRDGLQSYCR+Y+ +S+ ++++ D R + E K + + E
Sbjct: 342 QESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITE 401
Query: 430 YCEQ 433
+CE+
Sbjct: 402 FCER 405
>gi|24664230|ref|NP_524070.2| homolog of RecQ, isoform A [Drosophila melanogaster]
gi|23093484|gb|AAF49724.2| homolog of RecQ, isoform A [Drosophila melanogaster]
Length = 470
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 162/424 (38%), Positives = 243/424 (57%), Gaps = 45/424 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + LK FG FK +LQ+KA++ + + D++VSMPTG S +S
Sbjct: 4 ESAVHEALKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQ 54
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + S N I+ + S +D + + L +S TK ++
Sbjct: 55 LPG--------LMSENQ-ITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I++ L+ V+ +K LY+TPE+A T+ F LLQ L ++NKLAY VDEAHCVS+WGHDFR
Sbjct: 104 VIMD-LKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHDFR 162
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LGELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+
Sbjct: 163 PDYLKLGELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDI 221
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN-------CGIIYCRTREHTTDLADALRRK-- 323
++ + ++D + H+ +F CLG + + CGI+YCRTR+ +A + ++
Sbjct: 222 VYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGI 281
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYY
Sbjct: 282 GAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYY 341
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLE 429
QESGRAGRDGLQSYCR+Y+ +S+ ++++ D R + E K + + E
Sbjct: 342 QESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITE 401
Query: 430 YCEQ 433
+CE+
Sbjct: 402 FCER 405
>gi|240960494|ref|XP_002400557.1| DNA helicase, putative [Ixodes scapularis]
gi|215490700|gb|EEC00343.1| DNA helicase, putative [Ixodes scapularis]
Length = 981
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/424 (39%), Positives = 232/424 (54%), Gaps = 55/424 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARSRVR 91
L L+ +FG +F+ LQ+KA+ + D+FVSMPTGA SL + +VV+ S V
Sbjct: 10 LREALETVFGHTAFRSGLQEKAVEAVAQCAQDVFVSMPTGAGKSLCYQLPAVVTPDSSVT 69
Query: 92 IPPGADFILNGNVRSRNGWISPI---LSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ +SP+ +S + RD G E I S K
Sbjct: 70 V-----------------VVSPLIALMSDQLQKLRD------LG----IDAETINSTMKK 102
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+E + +L + P +LLYVTPE+ TE F +L+ L R KLA +DEAHCVSEWG
Sbjct: 103 SERDRVRSDLLSMSPETRLLYVTPEQVATEGFQGILKALHRIGKLARFAIDEAHCVSEWG 162
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y +LG +R + +P++ALTATA V DI+ L+ +P +FKTS+FR+NL
Sbjct: 163 HDFRPDYLKLGRVRDMFPD-VPVVALTATASAKVFDDILVQLRLRQPVAIFKTSSFRANL 221
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNC-----GIIYCRTREHTTD-------- 315
+YDV F + L++ + ++K F K LG D + +C GI+YCRTR+ +
Sbjct: 222 YYDVEFKEALEEPFENLKGFALKALGADWDSEDCKRRGSGIVYCRTRDACEEVSLKLTSL 281
Query: 316 --LADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
L + ER Q + G + VI AT+SFGMG+DR VRFV HW +P S+PA
Sbjct: 282 GLLTKPYHGGMKPSEREENQAEWTEGRLPVIAATVSFGMGVDRAMVRFVAHWSVPQSVPA 341
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ-----LELKFKNYLSML 428
YYQESGRAGRDG SYCRIY+S +K++ ++I+ D R E K + M+
Sbjct: 342 YYQESGRAGRDGRPSYCRIYYSRRDRKAITFLIQQDGKRARNNRGKVVAEAAAKAFEKMV 401
Query: 429 EYCE 432
E+CE
Sbjct: 402 EFCE 405
>gi|345317380|ref|XP_001519897.2| PREDICTED: ATP-dependent DNA helicase Q5 [Ornithorhynchus anatinus]
Length = 412
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/420 (38%), Positives = 234/420 (55%), Gaps = 42/420 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+++ + LK +FGFDSFK LQ+ A ++ D+FV MPTGA G + + +
Sbjct: 6 ERQVQSTLKKVFGFDSFKTALQESATMAVVKGEKDVFVCMPTGA----GKSLCYQLPALL 61
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ +D ++ + L S E +
Sbjct: 62 AAGITIV-----------VSPLIA----LIQDQVDHLLALKVQAASLN---SKLPAAERR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
A+ EL +PR+KLLYVTPE SF +L LV LAY+VVDEAHCVS+WGHDFR
Sbjct: 104 ALEAELGRPEPRLKLLYVTPEMVAAPSFQPILNSLVSRRLLAYLVVDEAHCVSQWGHDFR 163
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LG LR ++ P +ALTATA V+ D+++ L +P F+T FR+NLFYDV
Sbjct: 164 PDYLQLGALRARLPHT-PCVALTATAPRQVRDDVVAALGLRQPIATFQTPCFRANLFYDV 222
Query: 273 IFDDLLKDSYAHVKEFIEKCLG-KDNKA--NNCGIIYCRTREHTTDLADALRRK------ 323
F DLL D +A + +F + LG +D + + CGI+YCRTRE LA L +
Sbjct: 223 CFKDLLSDPFADLWDFCLQALGERDARGAFSGCGIVYCRTREACDQLARELSYRGLEAKA 282
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER VQ +M ++ VI ATISFGMG+D+ NVR V HW + S+ YYQESG
Sbjct: 283 YHAGLKAAERVLVQNEWMEEKVPVIVATISFGMGVDKANVRCVAHWHIAKSMAGYYQESG 342
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS---TKR---EQLELKFKNYLSMLEYCEQ 433
RAGRDG S+CR+Y+S + + ++IK + + +KR + + K + ++ +CE+
Sbjct: 343 RAGRDGKASWCRLYYSRKDRDQISFLIKKEIARLQSKRGHKDSDKAALKAFDVLVAFCEE 402
>gi|195019459|ref|XP_001984985.1| GH16802 [Drosophila grimshawi]
gi|193898467|gb|EDV97333.1| GH16802 [Drosophila grimshawi]
Length = 1110
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 242/419 (57%), Gaps = 49/419 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG SFK ELQ++AI+ + + D++VSMPTG+ G + F
Sbjct: 18 LQRHFGHKSFKSELQQQAIKCAVKKKQDVYVSMPTGS----GKSLC------------FQ 61
Query: 100 LNGNVRSRNGWI--SPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
L G + I SP+L+ ++ + D + + +D + S + E + ++ +
Sbjct: 62 LPGLMCKDQLTIVFSPLLA--LIKDQIDHLAKLKVPADS-----LNSKMSSKERERVITD 114
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
LR +K I+ LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+WGHDFRP Y +
Sbjct: 115 LRAIKTNIRFLYITPEQAATKFFQDLLHSLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLK 174
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LGELR + + +ALTATA V++DI LK +P F T +FRSNL+YD+++ +
Sbjct: 175 LGELRAKYPDVV-WLALTATASREVREDIYKQLKLRQPVAQFSTPSFRSNLYYDIVYKNS 233
Query: 278 LKDSYAHVKEFIEKCLGKDNK-------ANNCGIIYCRTREHTTDLADALRRK------- 323
++D + H+ F + CLG + + CGIIYCRTR+ +A + ++
Sbjct: 234 IEDDFQHLAAFAQHCLGDEEQFKALPKPKRGCGIIYCRTRDQVERVAVGVSKQGIAAIAY 293
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +R VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGR
Sbjct: 294 HAGLKTADRVEVQEAWMRGDKAIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGR 353
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTST-----KREQL-ELKFKNYLSMLEYCEQ 433
AGRD L SYCR+Y+ +S+ ++++ D RE L E + + ++++CEQ
Sbjct: 354 AGRDNLPSYCRLYYGREDVRSIRFLLQHDAQRARGRGDREMLTERALRQFERIVDFCEQ 412
>gi|195327576|ref|XP_002030494.1| GM24539 [Drosophila sechellia]
gi|194119437|gb|EDW41480.1| GM24539 [Drosophila sechellia]
Length = 1059
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 240/417 (57%), Gaps = 45/417 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG FK +LQ+KA++ + + D++VSMPTG S +S PG +
Sbjct: 11 LKKHFGHSKFKSDLQEKAVKCAVKKKQDVYVSMPTG---------SGKSLCFQLPG---L 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ N I+ + S +D + + L +S TK ++ I++ L+
Sbjct: 59 MSEN------QITIVFSPLLALIKDQIDHLTKLKVPADSLNSKMS--TKERDRVIMD-LK 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ +K LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+WGHDFRP Y +LG
Sbjct: 110 AVRTNLKFLYITPEQAATKFFQDLLHTLHKHKKLAYFAVDEAHCVSQWGHDFRPDYLKLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR + I +ALTATA VK+DI L+ ++P F T +FR NLFYD+++ + ++
Sbjct: 170 ELRSKYSDVI-WLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYDIVYKNSIE 228
Query: 280 DSYAHVKEFIEKCLG-----KD--NKANNCGIIYCRTREHTTDLADALRRK--------- 323
D + H+ +F CLG KD CGI+YCRTR+ +A + ++
Sbjct: 229 DDFQHLADFARHCLGDPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQGIGAVAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P ++ AYYQESGRAG
Sbjct: 289 GLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKNYLSMLEYCEQ 433
RDGLQSYCR+Y+ +S+ ++++ D R + E K + + E+CE+
Sbjct: 349 RDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQFEKITEFCER 405
>gi|345485326|ref|XP_001600102.2| PREDICTED: ATP-dependent DNA helicase Q5 [Nasonia vitripennis]
Length = 1040
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/386 (42%), Positives = 218/386 (56%), Gaps = 55/386 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E L AKLK+ FG D++K +LQ+KA + D+++ MPTG S +S
Sbjct: 8 EARLRAKLKSQFGHDNYKSDLQRKAAEAVYKGEKDVYICMPTG---------SGKSLCFQ 58
Query: 93 PPGADFILNGNVRSRNGW---ISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-----S 144
P V N + ISP+++ +V + D + IV S
Sbjct: 59 LPA--------VTKENSYAIVISPLIA------------LVKNQLDYLNSKNIVAHTLNS 98
Query: 145 GQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
TK AI ++ KP++KLLYVTPE T +F +L ++ N L+Y V+DEAHC+
Sbjct: 99 KTTKNMRLAIKTDMLSSKPKMKLLYVTPELCDTSTFQLMLSQ-IKPNVLSYFVIDEAHCL 157
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
S+WGHDFRP+YR+L ELR+ +PIIALTATA VK+DI LK P +F T F
Sbjct: 158 SQWGHDFRPSYRKLIELRK-KRPEVPIIALTATAAKEVKEDIFKTLKMESPM-IFSTPVF 215
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADA 319
R+NLFYDV F D + D + H+K+FI LG ++ + NCGIIYCR +E T LA
Sbjct: 216 RTNLFYDVWFIDAIPDPFEHLKKFINDSLGPNDDSVPKEKKNCGIIYCRKKETTETLARK 275
Query: 320 LRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
L + ER VQ+S+ G + VI AT SFGMG+D+ +VRFV HW +P
Sbjct: 276 LSSMGIPTLSYHAGLKSKERMEVQDSWTNGVVPVIAATCSFGMGVDKGSVRFVAHWTVPQ 335
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHS 395
+I +YYQESGRAGRDG QSYCR+Y S
Sbjct: 336 TIASYYQESGRAGRDGKQSYCRVYFS 361
>gi|39645296|gb|AAH63440.1| RecQ protein-like 5 [Homo sapiens]
gi|119609698|gb|EAW89292.1| RecQ protein-like 5, isoform CRA_c [Homo sapiens]
Length = 964
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 234/419 (55%), Gaps = 68/419 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIV------------ 48
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+SP+++ +D ++T + + L +S Q E K
Sbjct: 49 ------------------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 381
>gi|426346800|ref|XP_004041059.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Gorilla gorilla
gorilla]
Length = 979
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/419 (37%), Positives = 234/419 (55%), Gaps = 68/419 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVVK------------GITIV------------ 48
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+SP+++ +D ++T + + L +S Q E K
Sbjct: 49 ------------------VSPLIA----LIQDQVDHLLTLKVRVSSLNSKLSAQ---ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN------YLSMLEYCEQ 433
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + + +++ +CE+
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATIMAFDALVTFCEE 381
>gi|390349584|ref|XP_795300.3| PREDICTED: ATP-dependent DNA helicase Q5-like [Strongylocentrotus
purpuratus]
Length = 1223
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/385 (39%), Positives = 218/385 (56%), Gaps = 38/385 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L KL+ LFG+ SFK ELQKK + D+F+ MPTGA G + + G
Sbjct: 59 LQDKLEDLFGYASFKSELQKKGTEEVFKAKKDVFILMPTGA----GKSLCYQLPATCKKG 114
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRD-DKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
+ ISP+++ + D+ I + E + S + K +
Sbjct: 115 VTLV-----------ISPLIALIEDQLTHLDELGI--------RAESLNSKIPAAKRKMV 155
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ +L KP+IK+LY+TPE A T +F +L++L IVVDEAHCVS+WGHDFRP
Sbjct: 156 MSDLYSKKPKIKMLYITPETAATSTFMTILKNLNNRGLFNGIVVDEAHCVSQWGHDFRPC 215
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y +LG L + S+ +ALTATA +V++DII L P F+ FR NLFYDV++
Sbjct: 216 YLKLGALHKEY-PSVACVALTATATDNVRKDIIQQLHMRAPVTEFRAGCFRENLFYDVVY 274
Query: 275 DDLLKDSYAHVKEFIEKCLGKD---NKANNCGIIYCRTREHTTDLADALRRK-------- 323
D+L+D H+K+F K L KD A+ CGI+YCRTR+ +A +L R+
Sbjct: 275 KDVLEDPLGHLKDFGLKLLQKDEALGNASGCGIVYCRTRDACVTVAGSLSRQGLISRAYH 334
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ +R+ VQE +M G++ VI ATISFGMG+D+ VRFV H+ +P S+ YYQESGRA
Sbjct: 335 GGMKAADRTSVQEQWMNGQVKVIVATISFGMGVDKATVRFVAHYNIPKSMAGYYQESGRA 394
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVI 406
GRDG+ S CR+Y+S + + ++I
Sbjct: 395 GRDGIPSRCRLYYSRQERNQVAFLI 419
>gi|443725010|gb|ELU12752.1| hypothetical protein CAPTEDRAFT_102278, partial [Capitella teleta]
Length = 622
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 227/402 (56%), Gaps = 47/402 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARS 88
++S+Q + LK++FG D F+ +LQ+ A+ + DIFVSMPTGA SL + +
Sbjct: 4 RISDQ-CSELLKSVFGHDEFRSDLQRNAVEAAVRGGVDIFVSMPTGAGKSLCYQLPAVAK 62
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
R G F+ ISP+++ + + + + + S +
Sbjct: 63 R-----GITFV-----------ISPLIALMQDQLEHLQALNIPANT-------LNSKMSA 99
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E KA++ +L +P KLLY+TPE+A T F + + L++ + + VVDEAHCVS+WG
Sbjct: 100 EERKAVMYDLNRERPHTKLLYITPEQAATSGFISITEMLMKKKLVEFFVVDEAHCVSQWG 159
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y +LG R+ G +P IALTATA P V DI + LK P FK + FR N
Sbjct: 160 HDFRPDYLKLGTYRKKLLG--VPCIALTATATPHVVGDIKNSLKLKAPVASFKATCFRPN 217
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN---------NCGIIYCRTREHTTDLAD 318
LFYDV+F DLL D Y ++ F K L D KA+ CGI+YCRTRE ++A
Sbjct: 218 LFYDVVFKDLLNDPYEDLRRFSLKSLDVDLKADLKEVDWNTKGCGIVYCRTRESCGEVAS 277
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L K +N R+ Q +M G + VI ATISFGMG+D+ NVRFV HW +P
Sbjct: 278 RLTSKGVPAKPYHAGLNASLRTETQTDWMEGRVAVIAATISFGMGVDKANVRFVAHWTLP 337
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDT 410
S+ YYQESGRAGRDG +S+CR+Y+++ + ++ ++++ +
Sbjct: 338 KSMAGYYQESGRAGRDGRRSFCRLYYTKDDRNTVAFLLRKEN 379
>gi|307175264|gb|EFN65310.1| ATP-dependent DNA helicase Q5 [Camponotus floridanus]
Length = 613
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 155/412 (37%), Positives = 224/412 (54%), Gaps = 39/412 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L + LK+ FG+DSFK ++QK+A I D+FV MPTG+ G
Sbjct: 2 LQSVLKSKFGYDSFKNDIQKQATTAIYKGKRDVFVCMPTGS------------------G 43
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
R ++ + S ++ +++ + + L S + E I+
Sbjct: 44 KSLCFQLPAIMREQKVAIVFSPLLALMKNQIDFLISKKINACSLNSTTSSK---ERNTIM 100
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E+L P+IKLLYVTPE + F ++ L + L+Y V+DEAHC+SEWGHDFRPTY
Sbjct: 101 EDLMSNSPKIKLLYVTPEMGAQKHFQEIVTKLCKKKALSYFVIDEAHCLSEWGHDFRPTY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+LG ++ IP+IALTATA VK DI+ L K +F FR NL+YDV F
Sbjct: 161 RQLGTFKKLCP-KIPMIALTATAAKQVKDDILQSLHM-KDALIFSQPVFRPNLYYDVWFL 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADAL---------- 320
+ L + H+K FI LG + + NCGIIYCR +E T +A L
Sbjct: 219 ETLDKPFVHLKNFILDALGPSDNSIPMHKRNCGIIYCRKKETTEIVAHKLTLAGITTLAY 278
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER+ VQ + GE+ VITAT SFGMG+D+ +VRFV+HW +P +I AYYQESGR
Sbjct: 279 HGSLKAQERNEVQNKWTTGEVPVITATCSFGMGVDKGSVRFVIHWTVPKNIAAYYQESGR 338
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-ELKFKNYLSMLEYC 431
AGRDG ++CR+Y S + ++IK + + K +L ++K++++ + YC
Sbjct: 339 AGRDGNPAFCRVYFSNEEYGPISFLIKEEIAHKNSELAKIKWQDFEKSVAYC 390
>gi|332849063|ref|XP_001143872.2| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Pan
troglodytes]
Length = 964
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 233/423 (55%), Gaps = 76/423 (17%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V S + A + ++
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIVVSPLIALIQDQV 60
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
D +L VR +S + S R E K
Sbjct: 61 ----DHLLTLKVR-----VSSLNSKLSAR----------------------------ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS----------MLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +L++K N S ++ +
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA----KLQVKRGNKASDKATIMAFDALVTF 378
Query: 431 CEQ 433
CE+
Sbjct: 379 CEE 381
>gi|397484326|ref|XP_003813328.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Pan paniscus]
Length = 964
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/423 (38%), Positives = 233/423 (55%), Gaps = 76/423 (17%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V S + A + ++
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIVVSPLIALIQDQV 60
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
D +L VR +S + S R E K
Sbjct: 61 ----DHLLTLKVR-----VSSLNSKLSAR----------------------------ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 ELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS----------MLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +L++K N S ++ +
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA----KLQVKRGNKASDKATIMAFDALVTF 378
Query: 431 CEQ 433
CE+
Sbjct: 379 CEE 381
>gi|395825934|ref|XP_003786175.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Otolemur
garnettii]
Length = 960
Score = 277 bits (708), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 158/411 (38%), Positives = 228/411 (55%), Gaps = 62/411 (15%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E+ + + LK +FGFDSFK LQK A ++ ++LV
Sbjct: 12 TERRVQSTLKKVFGFDSFKTPLQKSATMAVV------------KGITLV----------- 48
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+SP+++ +D ++T + + L +S Q E
Sbjct: 49 -------------------VSPLIA----LIQDQVDHLLTLKVQVSSLNSKLSAQ---ER 82
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
K +L +L KP+ +LLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDF
Sbjct: 83 KELLSDLEREKPQTRLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDF 142
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP Y RLG LR G + P +ALTATA P V++D+ + L +P FKT FR+NLFYD
Sbjct: 143 RPDYLRLGTLRSRLGRT-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYD 201
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH- 327
V F +L+ D Y ++++F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 202 VQFKELISDLYGNLRDFCLKALGQKTDKGLSGCGIVYCRTREACEQLAVELSCRGVNAKA 261
Query: 328 --------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER+ VQ +M +I VI ATISFGMG+D+ NVRFV HW + S+ Y QESG
Sbjct: 262 YHAGLKASERTLVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYCQESG 321
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 322 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATLLAF 372
>gi|402901085|ref|XP_003913487.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Papio anubis]
Length = 964
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 230/410 (56%), Gaps = 62/410 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIV------------ 48
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+SP+++ +D ++ + + L +S Q E K
Sbjct: 49 ------------------VSPLIA----LIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 DLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRCRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 372
>gi|426238468|ref|XP_004013175.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Ovis aries]
Length = 958
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 229/410 (55%), Gaps = 62/410 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ++AI ++ + I VS ++L+ V
Sbjct: 12 ERRVRSMLKKVFGFDSFKTPLQERAIMAVV-KGITIVVSP---LIALIQDQV-------- 59
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
D +L VR +SS + K S+ E K
Sbjct: 60 ----DHLLALKVR---------VSSL-----NSKLSV-------------------QERK 82
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L LV + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 83 ELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHDFR 142
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV
Sbjct: 143 PDYLRLGALRSRLADA-PCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANLFYDV 201
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +LL D Y ++++F K LG+ D + GIIYCRTRE LA L R VN
Sbjct: 202 QFKELLPDPYGNLRDFCLKALGQKADKGLSGGGIIYCRTREACEQLAIELSYRGVNAKAY 261
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 262 HAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 321
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + ++IK + + +E+ K + ++L +
Sbjct: 322 AGRDGKPSWCRLYYSRSDRDQVSFLIKKEVAKLQEKRGNKASDKAAVLAF 371
>gi|296203191|ref|XP_002748782.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Callithrix
jacchus]
Length = 963
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 227/410 (55%), Gaps = 62/410 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 13 EPRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIV------------ 48
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+SP+++ +D ++ + + L +S Q E K
Sbjct: 49 ------------------VSPLIA----LIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L+ KP+ K+LY+TPE A + SF L LV L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 ELLADLKQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L +P +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGR
Sbjct: 263 HAGLKVSERMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + S++ +
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKASIMAF 372
>gi|109118220|ref|XP_001097819.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Macaca mulatta]
Length = 964
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 230/410 (56%), Gaps = 62/410 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 13 ERRVRSTLKKVFGFDSFKTPLQENATMAVV------------KGITIV------------ 48
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+SP+++ +D ++ + + L +S Q E K
Sbjct: 49 ------------------VSPLIA----LIQDQVDHLLALKVRVSSLNSKLSAQ---ERK 83
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L +P+ K+LY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 84 DLLADLEREEPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 143
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR G++ P +ALTATA P V++D+ + L KP +FKT FR+NLFYDV
Sbjct: 144 PDYLRLGALRSRLGHA-PCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYDV 202
Query: 273 IFDDLLKDSYAHVKEFIEKCLGK--DNKANNCGIIYCRTREHTTDLADALR-RKVNKH-- 327
F +L+ D Y ++K+F K LG+ D + CGI+YCRTRE LA L R VN
Sbjct: 203 QFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKAY 262
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV+HW + S+ YYQESGR
Sbjct: 263 HAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQESGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
AGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 323 AGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKASDKATILAF 372
>gi|292612098|ref|XP_694922.4| PREDICTED: ATP-dependent DNA helicase Q5-like [Danio rerio]
Length = 936
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/414 (39%), Positives = 225/414 (54%), Gaps = 44/414 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FGF+ F+ Q++A+ +L D+FV MPTGA G + + + G +
Sbjct: 8 LKTHFGFEKFRSRQQEEAVNALLQGDRDVFVCMPTGA----GKSLCYQLPALMASGVTLV 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ + K V RS +L L E + IL +L
Sbjct: 64 -----------ISPLIALIQDQVEHLKALNVPARSINSKLPL-------AERRQILADLE 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
PR+KLLY+TPE + SF +L L L Y+ VDEAHCVS+WGHDFRP Y +LG
Sbjct: 106 SETPRLKLLYITPEMVASPSFQPVLSSLSSRGLLGYLAVDEAHCVSQWGHDFRPDYLKLG 165
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LR I IALTATA VK+DI L+ P VF T FR NL YDVIF DLL
Sbjct: 166 DLRSRL-QGIRCIALTATAPKRVKEDIERSLRLRSPL-VFSTPVFRKNLKYDVIFRDLLP 223
Query: 280 DSYAHVKEFIEKCLGKDNKANN---CGIIYCRTREHTTDLADALRR----------KVNK 326
+ Y H+ F ++ LG + CGI+YCRTRE ++A L + +
Sbjct: 224 EPYVHLLAFAKEALGGNTAEKGFAGCGIVYCRTRESCEEVAHKLTKLGIAAKPYHAGLKS 283
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+RS Q +M ++ +I ATISFGMG+D+ NVRFVVHW + S+ +YYQESGRAGRDGL
Sbjct: 284 GDRSENQADWMADKVPIIVATISFGMGVDKANVRFVVHWNLAKSLASYYQESGRAGRDGL 343
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTK-------REQLELKFKNYLSMLEYCEQ 433
S CRIY+S + L ++I+ + S K +EQ + ++ +M+ +CEQ
Sbjct: 344 PSSCRIYYSPKDRDQLNFLIRKEISRKQEKRGSEKEQDKAPILDFEAMVAFCEQ 397
>gi|307211690|gb|EFN87705.1| ATP-dependent DNA helicase Q5 [Harpegnathos saltator]
Length = 956
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/412 (38%), Positives = 225/412 (54%), Gaps = 40/412 (9%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L + LK FG+D+FK ++QK+A I D+FV MPTG S +S
Sbjct: 2 LRSVLKLKFGYDNFKSDIQKQATIAIDRGKQDVFVCMPTG---------SGKSLC----- 47
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
F L ++ + ++ + S ++ +V + + L S + E I+
Sbjct: 48 --FQLPAIMKEQ---VTIVFSPLLALMKNQIDFLVNKKINACSLNSTTSSK---ERSMIM 99
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++L P+I+LLYVTPE F ++ HL + L+Y V+DEAHC+SEWGHDFRP+Y
Sbjct: 100 KDLMSNAPKIRLLYVTPEMGAQPHFQEIITHLRKAKALSYFVIDEAHCLSEWGHDFRPSY 159
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+LG ++ + IP+IALTATA VK DI+ L P VF FR NLFYDV F
Sbjct: 160 RQLGVFKKLCPD-IPVIALTATAAKQVKDDILQNLHMKDPL-VFSQPVFRPNLFYDVWFL 217
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKA-----NNCGIIYCRTREHTTDLADAL---------- 320
+ L + H+K FI LG + + NCGIIYCR +E T +A L
Sbjct: 218 ETLDKPFVHLKNFILDALGPSDSSIPMDKRNCGIIYCRKKEATEIVAHKLSLSGIATLAY 277
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER+ VQ + GE+ VI AT SFGMG+D+ VRFVVHW +P +I AYYQESGR
Sbjct: 278 HGSLKAQERNEVQNKWTSGEVPVIAATCSFGMGVDKGPVRFVVHWTVPQNIAAYYQESGR 337
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD-TSTKREQLELKFKNYLSMLEYC 431
AGRDG ++CR+Y S + ++IK + T K E +++K+ N+ + YC
Sbjct: 338 AGRDGNSAFCRVYFSNEEFGPISFLIKEEITGKKTELVKIKWANFEKSVAYC 389
>gi|410981700|ref|XP_003997204.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Felis catus]
Length = 960
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 226/411 (54%), Gaps = 63/411 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ + + LK +FGFDSFK LQ+ A ++ +++V
Sbjct: 10 ERRVRSTLKKVFGFDSFKTPLQESATMAVV------------KGITIV------------ 45
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
ISP+++ +D ++ + + L +S Q E K
Sbjct: 46 ------------------ISPLIA----LIQDQVDHLLALKVRVSSLNSKLSAQ---EKK 80
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+L +L KP+ KLLY+TPE A + SF L L+ + L+Y+VVDEAHCVS+WGHDFR
Sbjct: 81 ELLSDLEQEKPQTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWGHDFR 140
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y RLG LR ++ P +ALTATA P V++D+ + L +P FKT FR+NLFYDV
Sbjct: 141 PDYLRLGTLRSRLAHA-PCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLFYDV 199
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANN---CGIIYCRTREHTTDLADALR-RKVN--- 325
F +LL D Y ++K+F K LG+ + CGI+YCRTRE LA L R VN
Sbjct: 200 QFKELLSDPYGNLKDFCLKALGQKTAKGSLSGCGIVYCRTREACEQLATELSYRGVNAKA 259
Query: 326 ------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
ER+ VQ +M ++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESG
Sbjct: 260 YHAGLKPSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 319
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
RAGRDG S+CR+Y+S + + + ++I+ + + +E+ K + ++L +
Sbjct: 320 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKASDKAAVLAF 370
>gi|344248551|gb|EGW04655.1| ATP-dependent DNA helicase Q5 [Cricetulus griseus]
Length = 409
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/391 (39%), Positives = 225/391 (57%), Gaps = 36/391 (9%)
Query: 53 LQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWIS 112
L++K I+ + D+FV MPTGA G + + + G + +S
Sbjct: 16 LERKPIKTAMSGDKDVFVCMPTGA----GKSLCYQLPALLAKGITIV-----------VS 60
Query: 113 PILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTP 172
P+++ +D ++ + + L +S Q E K +L +L KPR KLLY+TP
Sbjct: 61 PLIA----LIQDQVDHLLALKVQVSSLNSKLSVQ---ERKQLLSDLERDKPRTKLLYITP 113
Query: 173 ERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPII 232
E A + SF L L+ N L+Y+VVDEAHCVS+WGHDFRP Y RLG LR ++ P +
Sbjct: 114 EMAASASFQPTLNSLMSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHA-PCV 172
Query: 233 ALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKC 292
ALTATA P V++D+ + L +P FKT FR+NLFYDV F +L+ D Y ++++F K
Sbjct: 173 ALTATATPQVQEDVFASLHLKQPVASFKTPCFRANLFYDVQFKELIPDLYGNLRDFCLKA 232
Query: 293 LG-KDNKA--NNCGIIYCRTREHTTDLADAL-RRKVNKH---------ERSRVQESFMRG 339
LG K +K + CGI+YCRTRE +A L R VN +R++VQ +M
Sbjct: 233 LGQKADKGLLSGCGIVYCRTREACEQVAVELSSRGVNAKAYHAGLKAPDRTQVQNEWMEE 292
Query: 340 EINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSK 399
++ VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG S+CR+Y+S +
Sbjct: 293 KVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRSDR 352
Query: 400 KSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
+ ++I+ + +E+ K + ++L +
Sbjct: 353 DQVSFLIRKEIDKLQEKRGSKPSDKATLLAF 383
>gi|213982753|ref|NP_001135548.1| RecQ protein-like 5 [Xenopus (Silurana) tropicalis]
gi|195539645|gb|AAI68026.1| Unknown (protein for MGC:185094) [Xenopus (Silurana) tropicalis]
Length = 1050
Score = 274 bits (701), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/413 (38%), Positives = 229/413 (55%), Gaps = 43/413 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGF+SF+ +LQ+ A R ++ D+FV MPTGA + + A V
Sbjct: 21 LKNVFGFNSFRSDLQENATRAVVKGETDVFVVMPTGAGKSLCYQLPAVLSV--------- 71
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
I+ ++S +D +V + L S E K I+++L
Sbjct: 72 ----------GITVVISPLIALIQDQVDHLVALKIKACSLN---SKLPLPERKKIIQDLE 118
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
P+IKLLY+TPE A + SF +L L+ + L+Y+++DEAHCVSEWGHDFRP Y RLG
Sbjct: 119 SEAPQIKLLYITPEMAASASFQPILAQLLSRSLLSYLIIDEAHCVSEWGHDFRPDYLRLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR ++ P +ALTATA V+ DII+ LK +P +FKT FRSNLFYDV DL+
Sbjct: 179 SLRSRIPHT-PCVALTATATKQVQDDIIASLKLRQPVSMFKTPCFRSNLFYDVQLKDLVG 237
Query: 280 DSYAHVKEFIEKCLGKDNKANN---CGIIYCRTREHTTDLADALRRK----------VNK 326
D Y +KEF K LG CGI+YCRTR+ ++A L ++ +
Sbjct: 238 DPYGDLKEFCLKALGTKTPQGGFPGCGIVYCRTRDACEEVAVQLSQRGVLSKPYHAGLKA 297
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R +Q +M G + VI ATISFGMG+D+ NVRFV HW + S+ YYQESGRAGRDG
Sbjct: 298 GDRVTIQNDWMDGTVPVIVATISFGMGVDKANVRFVAHWNIAKSLAGYYQESGRAGRDGK 357
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQL-------ELKFKNYLSMLEYCE 432
Q++CR+Y+S + + ++I+ + + + + + + +M+ +CE
Sbjct: 358 QAFCRLYYSRTDRDQVGFLIRKEIAQAQAKRGDNKASDKAGMAGFDAMVSFCE 410
>gi|405951075|gb|EKC19019.1| ATP-dependent DNA helicase Q5 [Crassostrea gigas]
Length = 1138
Score = 271 bits (694), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 234/422 (55%), Gaps = 52/422 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +F D FK +LQK+A++ ++ +D+F+SMPTGA G + + PG +
Sbjct: 9 LKKIFKHDDFKSDLQKRAVKCVVEGKNDVFISMPTGA----GKSLCYQLPAVASPGITVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ + + + E I S T + ++E+L
Sbjct: 65 -----------VSPLIALMQDQLEHLEILKIPA-------ETINSKMTTKQRAKVVEDLN 106
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP+ KLLY+TPE+A +E L++ LV+ L Y VVDEAHCVS+WGHDFRP Y +LG
Sbjct: 107 RAKPKTKLLYITPEQAASEGCRTLIEGLVKRQMLTYFVVDEAHCVSQWGHDFRPDYLKLG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
R+ N +P +ALTATA +DI+ LK FKTS FRSN++YD++ D++
Sbjct: 167 SFRKIMPN-VPCVALTATATAQTVEDIVQQLKLKNQLTKFKTSCFRSNIYYDIVMKDVVH 225
Query: 280 DSYAHVKEFIEKCLGKD--NKANN----------CGIIYCRTREHTTDLADALRRK---- 323
D Y + +F LG++ K +N CGI+YCRTR+ ++A L RK
Sbjct: 226 DPYEDLMKFGLTSLGREMFTKEDNSLIENWSEFGCGIVYCRTRDACAEVASHLTRKGILT 285
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ R VQ +M G VI ATISFGMG+D+ NVRFV HW +P S+ YYQE
Sbjct: 286 KPYHAGLKADVRETVQSDWMEGRFPVIAATISFGMGVDKPNVRFVAHWTIPKSMSGYYQE 345
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS-----TKREQLELKF--KNYLSMLEY 430
SGRAGRDG QS+CR+Y+S+ ++ ++I + S T+ +++ K + ++++Y
Sbjct: 346 SGRAGRDGAQSFCRLYYSKREMDTVAFLINKENSKFTKNTEAQKIRKKAAESGFDAIVKY 405
Query: 431 CE 432
CE
Sbjct: 406 CE 407
>gi|410902085|ref|XP_003964525.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Takifugu rubripes]
Length = 954
Score = 270 bits (691), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 231/420 (55%), Gaps = 47/420 (11%)
Query: 37 TAKLKAL----FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
TA+LK + FGF++F+ ++Q+ ++ ++ D+FV MPTGA G + + +
Sbjct: 3 TARLKQVLHTHFGFENFRSKIQEDIVKAVVKGDRDVFVCMPTGA----GKSLCYQLPAVL 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ + K+ + S I S E +
Sbjct: 59 AQGITMV-----------VSPLIALIQDQVDRLKSLNIPACS-------INSKLPAGERR 100
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL +L P++KLLY+TPE + SF L L L+Y+ VDEAHCVS+WGHDFR
Sbjct: 101 LILADLGSSSPKLKLLYITPEMVASPSFQPCLTDLCSRGLLSYLAVDEAHCVSQWGHDFR 160
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y +LG LR +P +ALTATA +V++DI+ L P F T FRSNL YDV
Sbjct: 161 PDYLKLGSLRARM-PGVPCLALTATAPKNVQEDIVKSLNMCSPLS-FLTPVFRSNLHYDV 218
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKAN--NCGIIYCRTREHTTD----------LADAL 320
IF +++ + Y H+ FI+K L ++ +N CGI+YCRTRE LA A
Sbjct: 219 IFREIVPNPYVHLYAFIKKALEQEKNSNPQGCGIVYCRTREACETVAYQLTKLGVLAKAY 278
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +R+ VQ +M+G++ VI ATISFGMG+D+ VRFV HW + S+ +YYQESGR
Sbjct: 279 HAGLKAGDRTEVQNEWMQGKVLVIVATISFGMGVDKATVRFVAHWNLAKSLASYYQESGR 338
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK-------FKNYLSMLEYCEQ 433
AGRDGL S CRIY+S K+ + ++I + K+E+ + ++ +M+ +C Q
Sbjct: 339 AGRDGLPSSCRIYYSPRDKEQINFLIHQEVKRKQEKRGFEKDTDKAAITDFEAMVSFCVQ 398
>gi|195590258|ref|XP_002084863.1| GD12613 [Drosophila simulans]
gi|194196872|gb|EDX10448.1| GD12613 [Drosophila simulans]
Length = 1009
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 196/310 (63%), Gaps = 25/310 (8%)
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK ++ I++ L+ V+ +K LY+TPE+A T+ F LL L ++ KLAY VDEAHCVS+
Sbjct: 48 TKERDRVIMD-LKAVRTNLKFLYITPEQAATKFFQDLLHTLHKHKKLAYFAVDEAHCVSQ 106
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP Y +LGELR T + + +ALTATA VK+DI L+ ++P F T +FR
Sbjct: 107 WGHDFRPDYLKLGELRS-TYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRK 165
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLG-----KDNK--ANNCGIIYCRTREHTTDLADA 319
NLFYD+++ + ++D + H+ +F CLG KD CGI+YCRTR+ +A
Sbjct: 166 NLFYDIVYKNSIEDDFQHLADFARHCLGDPKEFKDTPKPQRGCGIVYCRTRDQVERMAIG 225
Query: 320 LRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
+ ++ + ER+ VQE++MRG+ +I AT SFGMG+D+ +VRFV+HW +P
Sbjct: 226 VTKQGIGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQ 285
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ------LELKFKN 423
++ AYYQESGRAGRDGLQSYCR+Y+ +S+ ++++ D R + E K
Sbjct: 286 NVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLLQNDAHRARGRGDKELLTERAIKQ 345
Query: 424 YLSMLEYCEQ 433
+ + E+CE+
Sbjct: 346 FEKITEFCER 355
>gi|391330518|ref|XP_003739707.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Metaseiulus
occidentalis]
Length = 876
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 160/415 (38%), Positives = 232/415 (55%), Gaps = 46/415 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+++F+C+ Q+KA + I D+FVSMPTGA G + ++P AD
Sbjct: 9 LKKSFGYENFRCDEQRKAAQEIYDGKRDVFVSMPTGA----GKSLC----FQLPCAADSA 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
V ++P+L+ + I+ RS E I S + + + + +L
Sbjct: 61 GVTVV------VTPLLALM-------ENQIIHARSFKIVTETINSTMSAVDKRRVRGDLM 107
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ P+ +LLYVTPE+ TE F + + L R L VVDEAHCV EWGHDFRP Y +LG
Sbjct: 108 SMSPKTQLLYVTPEQIATEGFLEIARALDRLKLLKRFVVDEAHCVLEWGHDFRPDYMKLG 167
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
R +F +P ALTATA ++ II LK +K+ +TS+FR NLFYDV + + L
Sbjct: 168 RARTEFP--QVPWAALTATASKKDEEGIIDALKLRNVFKI-RTSSFRKNLFYDVYYRETL 224
Query: 279 K-DSYAHVKEFIEKCLGK---DNKANN--CGIIYCRTREHTTDLADALRR---------- 322
+ +AH+ FI LGK D K CGI+YCRTR+ D+A L++
Sbjct: 225 HGEEFAHLAGFISDALGKGWEDEKPEKRGCGIVYCRTRQDCHDVASELQKLGVTSGAYHA 284
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER+ VQE +M+G+ + I ATISFGMGID+ VRFV HW S+ ++YQESGRAG
Sbjct: 285 GLRPAERTEVQEGWMKGKYSTIAATISFGMGIDKATVRFVAHWSPSKSLKSFYQESGRAG 344
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI-----KTDTSTKREQLELKFKNYLSMLEYCE 432
RDG + CR+Y+S K+S+ ++I K+ + K++ E+ K + S++ E
Sbjct: 345 RDGKPARCRVYYSLKDKRSISFLIQMEANKSKSERKKKHSEIAMKEFDSVVSMFE 399
>gi|198433869|ref|XP_002126337.1| PREDICTED: similar to RecQ protein-like 5 [Ciona intestinalis]
Length = 1114
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/421 (36%), Positives = 228/421 (54%), Gaps = 46/421 (10%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++T L F FK ++QK+AI I R D FVSMPTGA +S P
Sbjct: 12 KITHILHNTFKHKQFKSQVQKEAILKICQRKKDAFVSMPTGA---------GKSLCYQLP 62
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
F G V + ISP+++ + K + R+ + S QT +E +
Sbjct: 63 AVFF---GGV---SLVISPLIALMCDQLNHLKRFNIVART-------LNSKQTVSERNEV 109
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L +L +LLY+TPE+ T +F L+ L +K++ +++DEAHCVS+WGHDFRP
Sbjct: 110 LADLFSPDSSCRLLYITPEQTATAAFMELVMKLHARSKISMLIIDEAHCVSQWGHDFRPD 169
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y +LG LRQ N + IALTATA V++DI ++L +F T FR NL+YDV
Sbjct: 170 YMKLGSLRQKLVN-VQCIALTATATAEVQKDIFNLLHLPTSTAIFNTGVFRPNLYYDVKV 228
Query: 275 DDLLKDSYAHVKEFIEKCLG---KDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
+L+ D Y +++F +K L +K GI+YC RE ++ L ++
Sbjct: 229 KELVGDCYLDLQKFCQKALKISIAKSKPEGAGIVYCHKREDCMTISAELLKRGLLAKPYH 288
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ ER VQ + G++ +I AT+SFGMG+D+ NVRFV HW +P S+ YYQESGRA
Sbjct: 289 AGLSNKERESVQTDWTSGKVPIIVATVSFGMGVDKSNVRFVAHWTIPKSMAGYYQESGRA 348
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR--EQLELKFK--------NYLSMLEYC 431
GRDG QS CR+Y+S + ++ ++I+ D KR + E +FK N+ S++ YC
Sbjct: 349 GRDGEQSLCRLYYSRTDRNNINFLIRKDFDRKRAKSKSETQFKKHVQAITENFSSLVNYC 408
Query: 432 E 432
E
Sbjct: 409 E 409
>gi|313223438|emb|CBY40419.1| unnamed protein product [Oikopleura dioica]
Length = 636
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 143/434 (32%), Positives = 235/434 (54%), Gaps = 47/434 (10%)
Query: 22 NQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVG 81
+Q K ++E+++ A L+ FG F+ ++Q++A++ + L D F+ +PTG G
Sbjct: 76 SQPPSKATNITEEDIYAALREKFGHSGFRSQIQEEAVKELCLGDRDAFICLPTGG----G 131
Query: 82 SVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + + PG + ISP+++ D+ + + + E
Sbjct: 132 KSLIYQLPALLYPGISIV-----------ISPLIALI-----QDQLKALLDKD--IRAES 173
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
I S + E +AI+++L P+ ++LYVTPE+ T+ F L + + + + +DEA
Sbjct: 174 INSKLSTEERRAIMDDLYSGVPKTRILYVTPEQVQTQRFIKLARWMNSRCLIHLVAIDEA 233
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
HCVS+WGHDFRP Y +LG LR+ N+ +A TATA +++D+ +LK K VF+T
Sbjct: 234 HCVSQWGHDFRPDYLKLGLLREIIPNAR-FVACTATATKKIEEDVCRILKMKK-CAVFRT 291
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLAD 318
R NL+YDV D+L + + H+ F +C+GK D GI+YC R+ ++A
Sbjct: 292 GITRENLYYDVKMKDILPNPHKHLANFARECIGKQRPDGSYEGAGIVYCFRRDDCEEMAV 351
Query: 319 ALRR----------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
+L R + R+RVQE + G + VI ATISFGMG+D++NVRFV HW +P
Sbjct: 352 SLTRLGVEAEPYHAGLKPETRTRVQEDWTEGRVPVICATISFGMGVDKENVRFVAHWTLP 411
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT----------DTSTKREQLE 418
S+ Y QESGRAGRD S CR+Y+S ++SL ++IK + ++++
Sbjct: 412 KSLAGYLQESGRAGRDNKPSKCRLYYSREEQRSLIFIIKKPLMWKKKDIGNAEQNKKKVM 471
Query: 419 LKFKNYLSMLEYCE 432
++ + + S+ +YCE
Sbjct: 472 IQLRQFESVTKYCE 485
>gi|360043064|emb|CCD78476.1| putative dna helicase recq5 [Schistosoma mansoni]
Length = 1046
Score = 251 bits (641), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 221/416 (53%), Gaps = 58/416 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S+ + L +F ++FK +LQ++A + D+F+SMPTG+ G + +
Sbjct: 9 SQDGVYTALNDIFKLETFKSKLQEQATLSVFKGKSDVFISMPTGS----GKSLCFQLPSV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLY-QLELIVSGQTKTE 150
+ PG + +SP+L+ + +T L+ + E I S T+
Sbjct: 65 VHPGIALV-----------VSPLLALI--------SDQLTHLKKLHIRAETINSRTADTQ 105
Query: 151 NKAILEELRLV----KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
+ + +L K KLLY+TPE+ T L+ L + L+Y VVDEAHCVSE
Sbjct: 106 RRKLFHQLMSTPLGSKSYPKLLYITPEQLQTPFSSTLICQLYEKSCLSYFVVDEAHCVSE 165
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDII--------------SVLKF 252
WGHDFRP Y LG++R+ ++P IALTATA P V++DII S L F
Sbjct: 166 WGHDFRPAYLALGKIRRKLFPTVPCIALTATATPRVREDIIKCLGLGELSNHSSISSLGF 225
Query: 253 NKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN------NCGIIY 306
+ FK S FR NL+YDV+F DLL D YA V +F + +G D CGI+Y
Sbjct: 226 IGNLEEFKCSVFRPNLYYDVVFGDLLDDIYADVLQFAAESIGWDKSQKCDWTKLGCGIVY 285
Query: 307 CRTREHTTDLADAL----------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDR 356
CRTR LA+ L ++K ER VQ + G ++ ATISFGMG+D+
Sbjct: 286 CRTRTDCEGLAEKLTSLGLSSRAYHAGLSKSEREDVQMGWSSGLYPIVVATISFGMGVDK 345
Query: 357 QNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTST 412
NVRFV+HW +P S+ AYYQESGRAGRDGLQ+ CRIY+ + + ++ ++ + ++
Sbjct: 346 PNVRFVLHWTLPKSLAAYYQESGRAGRDGLQASCRIYYFKKERDTVVFLTNQEPNS 401
>gi|256072893|ref|XP_002572768.1| DNA helicase recq5 [Schistosoma mansoni]
Length = 1047
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 153/416 (36%), Positives = 221/416 (53%), Gaps = 58/416 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S+ + L +F ++FK +LQ++A + D+F+SMPTG+ G + +
Sbjct: 9 SQDGVYTALNDIFKLETFKSKLQEQATLSVFKGKSDVFISMPTGS----GKSLCFQLPSV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLY-QLELIVSGQTKTE 150
+ PG + +SP+L+ + +T L+ + E I S T+
Sbjct: 65 VHPGIALV-----------VSPLLALI--------SDQLTHLKKLHIRAETINSRTADTQ 105
Query: 151 NKAILEELRLV----KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
+ + +L K KLLY+TPE+ T L+ L + L+Y VVDEAHCVSE
Sbjct: 106 RRKLFHQLMSTPLGSKSYPKLLYITPEQLQTPFSSTLICQLYEKSCLSYFVVDEAHCVSE 165
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDII--------------SVLKF 252
WGHDFRP Y LG++R+ ++P IALTATA P V++DII S L F
Sbjct: 166 WGHDFRPGYLALGKIRRKLFPTVPCIALTATATPRVREDIIKCLGLGELSNHSSISSLGF 225
Query: 253 NKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN------NCGIIY 306
+ FK S FR NL+YDV+F DLL D YA V +F + +G D CGI+Y
Sbjct: 226 IGNLEEFKCSVFRPNLYYDVVFGDLLDDIYADVLQFAAESIGWDKSQKCDWTKLGCGIVY 285
Query: 307 CRTREHTTDLADAL----------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDR 356
CRTR LA+ L ++K ER VQ + G ++ ATISFGMG+D+
Sbjct: 286 CRTRTDCEGLAEKLTSLGLSSRAYHAGLSKSEREDVQMGWSSGLYPIVVATISFGMGVDK 345
Query: 357 QNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTST 412
NVRFV+HW +P S+ AYYQESGRAGRDGLQ+ CRIY+ + + ++ ++ + ++
Sbjct: 346 PNVRFVLHWTLPKSLAAYYQESGRAGRDGLQASCRIYYFKKERDTVVFLTNQEPNS 401
>gi|341889852|gb|EGT45787.1| hypothetical protein CAEBREN_01169 [Caenorhabditis brenneri]
Length = 831
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 159/438 (36%), Positives = 220/438 (50%), Gaps = 73/438 (16%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILN 101
LF ++ LQ +AI IL R D++VS+PTGA SL + S I++
Sbjct: 176 LFQHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPS-------------IVH 222
Query: 102 GNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLV 161
G V +SP+++ K I + R E + S T E I EL
Sbjct: 223 GGVTV---VVSPLIALM-------KDQIASLRRKGIPCETLNSTLTTQERSRIWAELGRD 272
Query: 162 KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
KP I++LY+T E TE LL L + L YIVVDEAHCV++WGHDFRP Y LG L
Sbjct: 273 KPTIRMLYITAEGCATEGIKKLLGGLTKREVLRYIVVDEAHCVTQWGHDFRPDYLTLGSL 332
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
R +P +ALTATA + DI LK P + FK T+R NLFYDV D L +
Sbjct: 333 RDVCP-GVPWVALTATANAKAQDDIAFQLKLRNP-ESFKAGTYRDNLFYDVCMRDHLPTA 390
Query: 282 YA-HVKEFIEKCLGKDNKANN----------------------CGIIYCRTREHTTDLA- 317
H+ FI KCL D K N I+YCR+R +A
Sbjct: 391 PENHMASFINKCLTIDAKTNGISSNQTKNEKSGRANHKRTFTGSAIVYCRSRNECEQVAK 450
Query: 318 ---------DALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
+A + K +R+ VQE +M EI V+ AT++FGMGID+ +VR V+HW
Sbjct: 451 MLVIAGIPAEAYHAGLGKKDRNDVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPS 510
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE---------- 418
++ YYQE+GRAGRDG +SYCRIY+S+ K +L +++ + + RE+ +
Sbjct: 511 QNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNADGEKAA 570
Query: 419 LKFKNYLS----MLEYCE 432
++ K+ + ML+YCE
Sbjct: 571 MQIKSIQTGLQKMLDYCE 588
>gi|308490679|ref|XP_003107531.1| CRE-RCQ-5 protein [Caenorhabditis remanei]
gi|308250400|gb|EFO94352.1| CRE-RCQ-5 protein [Caenorhabditis remanei]
Length = 821
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 159/436 (36%), Positives = 221/436 (50%), Gaps = 71/436 (16%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILN 101
LF ++ LQ +AI IL R D++VS+PTGA SL + S I++
Sbjct: 165 LFLHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPS-------------IVH 211
Query: 102 GNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLV 161
G V +SP+++ K I + R E + S T E I EL
Sbjct: 212 GGV---TVVVSPLIALM-------KDQISSLRRKGIPCETLNSTLTTVERSRIWRELGKE 261
Query: 162 KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
KP I++LY+T E TE LL L + + L YIVVDEAHCV++WGHDFRP Y LG L
Sbjct: 262 KPTIRMLYITAEGCATEGIKKLLGDLTKRDVLRYIVVDEAHCVTQWGHDFRPDYLTLGSL 321
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
R +P +ALTATA + DI LK P + FK T+R NLFYDV D L +
Sbjct: 322 RDVCP-GVPWVALTATANAKAQDDIAFQLKLRNP-ESFKAGTYRDNLFYDVCMRDHLPSA 379
Query: 282 YA-HVKEFIEKCLG--------------KDNKANN------CGIIYCRTREHTTDLADAL 320
H+ FI KCL K +A N I+YCR+R +A L
Sbjct: 380 PENHMASFITKCLTVDIKTSTPSLTKNEKSGRAQNKKTFVGSAIVYCRSRNECEQVAKML 439
Query: 321 ----------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ K +R+ VQE +M EI V+ AT++FGMGID+ +VR V+HW +
Sbjct: 440 VIAGIPAMAYHAGLGKKDRNDVQEQWMSNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQN 499
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE----------LK 420
+ YYQE+GRAGRDG +SYCRIY+S+ K +L +++ + + RE+ + ++
Sbjct: 500 LAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNAEGEKAAMQ 559
Query: 421 FKNYLS----MLEYCE 432
K+ + ML+YCE
Sbjct: 560 IKSIQTGLQKMLDYCE 575
>gi|268575162|ref|XP_002642560.1| C. briggsae CBR-RCQ-5 protein [Caenorhabditis briggsae]
Length = 813
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 218/436 (50%), Gaps = 79/436 (18%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+F ++ LQ +AI IL R D++VS+PTGA + + A +++G
Sbjct: 173 VFRHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPA------------VVHG 220
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
V +SP+++ K ++ R E + S T E IL EL +
Sbjct: 221 GV---TIVVSPLIALM-------KDQVMALRKKGIPCETLNSTLTPVERTRILGELAKMN 270
Query: 163 PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
P I+LLY+T E T+S LL L R L YIVVDEAHCV++WGHDFRP Y LG LR
Sbjct: 271 PTIRLLYITAEGCATDSMKALLGSLTRREVLRYIVVDEAHCVTQWGHDFRPDYLNLGALR 330
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSY 282
+ +P +ALTATA + DI S L+ P + FK T+R NL+YD
Sbjct: 331 DVCPD-VPWVALTATANEKAQNDISSQLRLRNP-EAFKAGTYRDNLYYD----------- 377
Query: 283 AHVKEFIEKCLGKD------NKANN--------------CGIIYCRTREHTTDLADALR- 321
H+ FI KCL D N N I+YCR+R +A+ LR
Sbjct: 378 NHMASFITKCLTIDQAKTTSNLTKNEKSARTQAKKSFTGSAIVYCRSRSECEQIANVLRI 437
Query: 322 ---------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ K ER+ VQE +M EI V+ AT++FGMGID+ +VR VVHW ++
Sbjct: 438 AGIPAMAYHAGLPKKERNEVQEKWMSNEIPVVAATVAFGMGIDKPDVRAVVHWSPTQNLA 497
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVI-------KTDTSTKR---EQLELKFK 422
YYQE+GRAGRDG +SYCRIY+++ K +L +++ KT K E+ ++ K
Sbjct: 498 GYYQEAGRAGRDGKRSYCRIYYAKSDKNALNFLVSGELAKLKTKAEKKNAEGEKAAMQIK 557
Query: 423 N----YLSMLEYCEQG 434
+ MLEYCE
Sbjct: 558 SIQVGLAKMLEYCESA 573
>gi|17552866|ref|NP_497810.1| Protein RCQ-5 [Caenorhabditis elegans]
gi|3875424|emb|CAA86232.1| Protein RCQ-5 [Caenorhabditis elegans]
Length = 809
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/434 (34%), Positives = 217/434 (50%), Gaps = 79/434 (18%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
LF ++ LQ +AI IL R D++VS+PTGA + + A +++G
Sbjct: 172 LFCHKKYRSRLQMQAINCILKRKCDVYVSLPTGAGKSLCYQLPA------------VVHG 219
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
I+ ++S +D +S+ + E + S T E I+ EL K
Sbjct: 220 G-------ITVVISPLIALMKDQISSL---KRKGIPCETLNSTLTTVERSRIMGELAKEK 269
Query: 163 PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
P I++LY+T E T+ LL L + L YIVVDEAHCV++WGHDFRP Y LG LR
Sbjct: 270 PTIRMLYLTAEGVATDGTKKLLNGLANRDVLRYIVVDEAHCVTQWGHDFRPDYLTLGSLR 329
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSY 282
+P +ALTATA + DI LK P + FK+ T+R NLFYD
Sbjct: 330 DVCP-GVPWVALTATANAKAQDDIAFQLKLRNP-ESFKSGTYRDNLFYD----------- 376
Query: 283 AHVKEFIEKCLGKDNKANNC--------------------GIIYCRTREHTTDLADALR- 321
H+ FI KCL D K ++ I+YCR+R +A L
Sbjct: 377 NHMASFITKCLTVDAKTSSSNLTKHEKAERSQNKKTFTGSAIVYCRSRNECGQVAKMLEI 436
Query: 322 ---------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ K +R+ VQE +M EI V+ AT++FGMGID+ +VR V+HW ++
Sbjct: 437 AGIPAMAYHAGLGKKDRNEVQEKWMNNEIPVVAATVAFGMGIDKPDVRAVIHWSPSQNLA 496
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR----------EQLELKFK 422
YYQE+GRAGRDG +SYCRIY+S+ K +L +++ + + R E+ E++ K
Sbjct: 497 GYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKAKKNNAEGEKAEMQIK 556
Query: 423 NYLS----MLEYCE 432
+ + MLEYCE
Sbjct: 557 SIQTGLAKMLEYCE 570
>gi|313244395|emb|CBY15192.1| unnamed protein product [Oikopleura dioica]
Length = 601
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/424 (31%), Positives = 221/424 (52%), Gaps = 62/424 (14%)
Query: 22 NQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVG 81
+Q K ++E+++ A L+ FG F+ ++Q++A++ + LR D F+ +PTG G
Sbjct: 76 SQPPSKATNITEEDIYAALREKFGHSGFRSQIQEEAVKELCLRDRDAFICLPTGG----G 131
Query: 82 SVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + + PG + ISP+++ D+ + + + E
Sbjct: 132 KSLIYQLPALLYPGISIV-----------ISPLIALI-----QDQLKALLDKD--IRAES 173
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
I S + E +AI+++L P+ ++LYVTPE+ T+ F L + + + + +DEA
Sbjct: 174 INSKLSTEERRAIMDDLYSGVPKTRILYVTPEQVQTQRFIKLARWMNSRCLIHLVAIDEA 233
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
HCVS+WGHDFRP Y +LG LR+ N+ +A TATA V++D+
Sbjct: 234 HCVSQWGHDFRPDYLKLGLLREIIPNAR-FVACTATATKKVEEDVWIT------------ 280
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLAD 318
R NL+YDV D+L + + H+ F +C+GK D GI+YC R+ ++A
Sbjct: 281 ---RENLYYDVKMKDILPNPHKHLANFARECIGKQRPDGSYEGAGIVYCFRRDDCEEMAV 337
Query: 319 ALRR----------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
+L R + R+RVQE + G + VI ATISFGMG+D++NVRFV HW +P
Sbjct: 338 SLTRLGVEAEPYHAGLKPETRTRVQEDWTEGRVPVICATISFGMGVDKENVRFVAHWTLP 397
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSML 428
S+ Y QESGRAGRD S CR+Y+S ++ ++++ ++ + + S+
Sbjct: 398 KSLAGYLQESGRAGRDNKPSKCRLYYSREEQQQ-----------NKKKVMIQLRQFESVT 446
Query: 429 EYCE 432
+YCE
Sbjct: 447 KYCE 450
>gi|339239889|ref|XP_003375870.1| ATP-dependent DNA helicase RecQ [Trichinella spiralis]
gi|316975445|gb|EFV58885.1| ATP-dependent DNA helicase RecQ [Trichinella spiralis]
Length = 440
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 198/390 (50%), Gaps = 54/390 (13%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
L D+FVSMPTG+ G R+G ++ + S
Sbjct: 10 LGDRDVFVSMPTGS------------------GKSLCYQLPALLRSG-VTVVFSPLIALI 50
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK---PRIKLLYVTPERAVTES 179
D + + G + S T E +++L +L P KLLY+TPE+A T +
Sbjct: 51 SDQLSHLEPGS--------LHSKLTNAERQSLLNDLLGAGSKVPNTKLLYITPEQAETAT 102
Query: 180 FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAE 239
+L L + L Y+ VDEAHCVS+WGHDFRP Y LG LRQ + +P IALTATA
Sbjct: 103 CRSVLDSLHQRQLLNYVAVDEAHCVSQWGHDFRPKYLNLGALRQRY-DDVPWIALTATAT 161
Query: 240 PSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA 299
V DI+ +LK P FK +R NLFYDV F D + D HV +F+++ +
Sbjct: 162 GKVVGDILRLLKLKPPVAEFKHPCYRPNLFYDVQFKDTIADGEKHVADFLKQIF---TEQ 218
Query: 300 NNCGIIYCRTREHTTDLAD----------ALRRKVNKHERSRVQESFMRGEINVITATIS 349
GI+YCRTRE A A ++ R +V +M G+++VI ATIS
Sbjct: 219 GGSGIVYCRTRERCESFAADISGYGIRCAAYHAGLSNKVREKVYNDWMVGKVHVIVATIS 278
Query: 350 FGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD 409
FGMG+D+ +VR VVHW +P ++ YYQESGRAGRDG +SYCRIY+ ++ EY K
Sbjct: 279 FGMGVDKSDVRCVVHWDLPKTLTGYYQESGRAGRDGNRSYCRIYYCREERRVGEYFTKQS 338
Query: 410 TSTKR----------EQLELKFKNYLSMLE 429
K+ + ++++F+ +S E
Sbjct: 339 ILNKKMSKDFSPHAEKAMKMEFEEIVSFCE 368
>gi|302820099|ref|XP_002991718.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
gi|300140567|gb|EFJ07289.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
Length = 594
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 151/416 (36%), Positives = 223/416 (53%), Gaps = 55/416 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG SF+ LQ AI +L D F MPTGA + + A ++ PG +
Sbjct: 5 LQRYFGHSSFR-GLQLDAIEAVLA-GKDCFCMMPTGAGKSLCYQIPALAK----PGIVLV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D+ + + R ++ L S K NK I EEL+
Sbjct: 59 -----------VSPLIA-----LMEDQVAALKSR-QIFAEYLSSSQPVKMRNK-IFEELQ 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP +KLLYVTPE T L+ L + L+ I +DEAHC+S WGHDFRP+YR+L
Sbjct: 101 SGKPNLKLLYVTPESVATNHLMQKLRKLHERSLLSLIAIDEAHCISSWGHDFRPSYRKLS 160
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR + IPI+ALTATA V++DII L K V +S R+N+FY+V F DL+K
Sbjct: 161 ALRTSLPD-IPILALTATASKKVQEDIIKSLSLQKA-AVLISSFNRANIFYEVRFKDLMK 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+Y ++ I C IIYC R ++ L+ +N R
Sbjct: 219 SAYEDLRNII------TTAPTRCMIIYCHARAMCDEIGSRLKSDGISCRVYHAGINVKAR 272
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S+ + ++ GE+++I ATI+FG GIDR++VR V H+ MP S+ ++YQESGRAGRDG +
Sbjct: 273 SQALQDWVLGEVHIIVATIAFGYGIDRKDVRMVCHFNMPKSLESFYQESGRAGRDGKPAK 332
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQL--------ELKFKN---YLSMLEYCEQG 434
+Y+S K+++EYVI+ +S++R+Q EL KN + ++ YCE+
Sbjct: 333 SILYYSVDDKRTMEYVIR--SSSQRQQAGISENGENELLKKNIEAFEKVVAYCEEA 386
>gi|302818699|ref|XP_002991022.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
gi|300141116|gb|EFJ07830.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
Length = 600
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 222/416 (53%), Gaps = 55/416 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG SF+ LQ AI +L D F MPTGA + + A ++ PG +
Sbjct: 5 LQRYFGHSSFR-GLQLDAIEAVLA-GKDCFCMMPTGAGKSLCYQIPALAK----PGIVLV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D+ + + R ++ L S K NK I EEL+
Sbjct: 59 -----------VSPLIA-----LMEDQVAALKSR-QIFAEYLSSSQPVKMRNK-IFEELQ 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KP +KLLYVTPE T L+ L + L+ I +DEAHC+S WGHDFRP+YR+L
Sbjct: 101 SGKPNLKLLYVTPESVATNHLMQKLRKLHERSLLSLIAIDEAHCISSWGHDFRPSYRKLS 160
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR + IPI+ALTATA V++DII L K V +S R+N+FY+V F DL+
Sbjct: 161 ALRTSLPD-IPILALTATASKKVQEDIIKSLSLQKA-AVLISSFNRANIFYEVRFKDLMT 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+Y ++ I K C IIYC R ++ L+ +N R
Sbjct: 219 SAYEDLRNIITK------APTRCMIIYCHARAMCDEIGSRLKSDGISCRVYHAGINVKAR 272
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S+ + ++ GE+++I ATI+FG GIDR++VR V H+ MP S+ ++YQESGRAGRDG +
Sbjct: 273 SQALQDWVLGEVHIIVATIAFGYGIDRKDVRMVCHFNMPKSLESFYQESGRAGRDGKPAK 332
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQ-----------LELKFKNYLSMLEYCEQG 434
+Y+S K+++EYVI+ +S++R+Q L+ + + ++ YCE+
Sbjct: 333 SILYYSVDDKRTMEYVIR--SSSQRQQGGISENGENELLKKNIEAFEKVVAYCEEA 386
>gi|358253428|dbj|GAA53032.1| ATP-dependent DNA helicase Q5 [Clonorchis sinensis]
Length = 1222
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/278 (43%), Positives = 158/278 (56%), Gaps = 29/278 (10%)
Query: 166 KLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFT 225
KLLYVTPE+ T SF L L + ++Y VVDEAHCVSEWGHDFRP Y LG+ RQ
Sbjct: 77 KLLYVTPEQIQTASFSVLANSLSNKDAISYFVVDEAHCVSEWGHDFRPAYLGLGKARQTF 136
Query: 226 GNSIPIIALTATAEPSVKQDIISVLKF----------NKP---YKVFKTSTFRSNLFYDV 272
++P IALTATA V+ DII LK + P ++ FK FR NLFYDV
Sbjct: 137 FPNVPCIALTATATARVQDDIIKSLKLGLSSPGKGCLSSPSLGFRTFKCGVFRPNLFYDV 196
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKAN------NCGIIYCRTREHTTDLADALRRK--- 323
F DL + + V + CL D GI+YCRTR +A L +
Sbjct: 197 TFSDLCEAPHEDVFSYASACLSWDGSVTKSWDHIGSGIVYCRTRSDCELMASRLNGRGLP 256
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ K +R VQ + G V+ ATISFGMG+DR NVRFV HW +P S+ +YYQ
Sbjct: 257 TRAYHAGLTKTDRETVQNDWSAGVFPVVAATISFGMGVDRANVRFVFHWTLPKSVASYYQ 316
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR 414
ESGRAGRDG Q++CRIY+S+ + ++ ++ T+ ++
Sbjct: 317 ESGRAGRDGKQAFCRIYYSKQERNTVMFLTNQHTNHRK 354
>gi|167518966|ref|XP_001743823.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777785|gb|EDQ91401.1| predicted protein [Monosiga brevicollis MX1]
Length = 453
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 216/411 (52%), Gaps = 45/411 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+A FGF FK Q+ A+R +L D+FV PTG G ++ + + G +
Sbjct: 15 LEATFGFAGFKSAEQEAAVRAVLHGGQDVFVCFPTGG----GKSLTYQLPAVVLGGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+L+ D T++ +S I S + E +L++LR
Sbjct: 71 -----------ISPLLALI----EDQVTAL---QSLGVHAATINSRTPRAERFDLLQQLR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++LLY+TPE T+ L+Q L + L + VDEAHCVSEWGHDFRP +RRL
Sbjct: 113 ARPCPLRLLYLTPETLQTDEMQQLIQALYDDSVLRLMAVDEAHCVSEWGHDFRPAFRRLA 172
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ + P++ALTATA+ V+ DII+ LK P V + ST+R NL +V D+
Sbjct: 173 VLRRLCPTT-PVMALTATAQAQVQSDIITTLKLRNP-AVVRRSTYRDNLTLEVRMKDMYP 230
Query: 280 DSYAHVKEFIEK----CLGKDNKANNCGIIYCRTREHTTDLADALRRKV----------- 324
+ + FIE + A+ GIIY RE +A A++R +
Sbjct: 231 NLMGDITTFIEAQHEAATARGQAAS--GIIYAFRREDCEAVAGAVQRHLTRAGIRCAAYH 288
Query: 325 ---NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
N ER+R+Q + G I+V+ ATI+FGMGID+ NVR+VVH M S+ AYYQE+GRA
Sbjct: 289 AGLNAEERNRIQHEWTVGHIHVVAATIAFGMGIDKANVRYVVHATMSKSLEAYYQEAGRA 348
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL-SMLEYC 431
GRDG + CR+Y+++ +Y+ + + +++ + + ++L M YC
Sbjct: 349 GRDGQPAVCRLYYAQSDMSLFQYLQQKEAKSRQNKEQPDRGDHLRHMQHYC 399
>gi|326514896|dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 219/436 (50%), Gaps = 51/436 (11%)
Query: 15 KSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPT 74
K+ L G + G S +EL + LK FG+ F+ Q +AI +L D F MPT
Sbjct: 3 KALPLKGGSAGSRHGTKSPKELESVLKQYFGYSEFRGR-QLEAIEAVL-SGRDCFCLMPT 60
Query: 75 GAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS 134
G G + + + G + ISP+++ + + + +S
Sbjct: 61 GG----GKSMCYQIPALVKTGVVLV-----------ISPLIALM-------ENQVSSLKS 98
Query: 135 DLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLA 194
E + S QT I E+L +P +KLLYVTPE T F L L L
Sbjct: 99 KGIPAEFLSSTQTTANKNKIHEDLDSGRPSLKLLYVTPELVATSGFKAKLTKLHNRGLLG 158
Query: 195 YIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFN 253
+ +DEAHC+S WGHDFRP+YR++ LR QF IPI+ALTATA P V++D+IS L
Sbjct: 159 LVAIDEAHCISTWGHDFRPSYRKISSLRKQFP--DIPILALTATAVPKVQKDVISSLSLQ 216
Query: 254 KPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHT 313
P + K S R N+FY+V + DLL D ++ + ++ + N C IIYC R
Sbjct: 217 NPV-ILKASFNRPNIFYEVRYKDLLDDVFSDISNLLK------SSGNVCSIIYCLERAAC 269
Query: 314 TDLADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVV 363
DL L ++ +N R+ V + ++ V+ AT++FGMGIDR +VR V
Sbjct: 270 DDLTMHLSQQGISSAAYHAGLNSKVRTTVLDDWLSSRTQVVVATVAFGMGIDRHDVRIVC 329
Query: 364 HWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR-------EQ 416
H+ +P S+ ++YQESGRAGRD S +Y+ ++ +E++++ +S K+ E
Sbjct: 330 HFNLPKSMESFYQESGRAGRDQQPSRSVLYYGLEDRRRMEFILRNSSSRKQQPPSSSTEL 389
Query: 417 LELKFKNYLSMLEYCE 432
E ++ +++YCE
Sbjct: 390 SEKTLADFSQIVDYCE 405
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 214/409 (52%), Gaps = 59/409 (14%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + D F+ MPTG G + + + PG +
Sbjct: 195 IFGNKAFR-PLQHEACKAAASK-QDCFILMPTGG----GKSLCYQLPATVQPGVTVV--- 245
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
ISP+LS + L+F T + S QT ++ +L
Sbjct: 246 --------ISPLLSLIQDQIVTLNLKFGIPST-------------FLNSQQTSSQAAVVL 284
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+ELR KP KLLYVTPER T+SF +L+ + +LA VVDEAHCVS+WGHDFRP Y
Sbjct: 285 QELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLASFVVDEAHCVSQWGHDFRPDY 344
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIF 274
R LG L+Q +P++ALTATA SV++D++ L+ P+ + +F R NL Y+V+
Sbjct: 345 RNLGCLKQ-NFPDVPVMALTATATHSVREDVLKALRI--PHALILERSFDRPNLKYEVVC 401
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
K+ + +FI K+ N CGI+YC ++ ++++ L +K
Sbjct: 402 K--TKEPLVQLGQFI-----KERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAG 454
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R VQ+ + G+I ++ ATI+FGMGID+ +VRFV+H M SI +YYQESGRAGR
Sbjct: 455 LAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGR 514
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG + C + + + + +++ K E ++ M ++CE
Sbjct: 515 DGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCE 563
>gi|357137820|ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Brachypodium
distachyon]
Length = 777
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 44/391 (11%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
G +S +EL LK FG+ F+ Q +AI +L D F MPTG G + +
Sbjct: 17 GTISPKELENVLKQYFGYSGFRGR-QLEAIEAVL-SGRDCFCLMPTGG----GKSMCYQI 70
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + ISP+++ + + + +S E + S QT
Sbjct: 71 PALVKAGIVLV-----------ISPLIALM-------ENQVTSLKSKGVPAEFLSSTQTA 112
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
I E+L P +KLLYVTPE T F L L L + +DEAHC+S WG
Sbjct: 113 KNKNEIYEDLDSGNPSLKLLYVTPELVATFGFKAKLTKLYSRGLLGLVAIDEAHCISTWG 172
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP+YR++ LR QF IPI+ALTATA P V++D+IS L P + + S R N
Sbjct: 173 HDFRPSYRKISSLRKQFP--DIPILALTATAVPKVQKDVISSLCLQNPV-ILRASFNRPN 229
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
+FY+V + DLL D Y+ + ++ + N C IIYC R DL L ++
Sbjct: 230 IFYEVRYKDLLDDVYSDISNLLK------SSGNVCSIIYCLERAACDDLNMHLSQQGISS 283
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+N RS V + ++ V+ AT++FGMGIDRQ+VR V H+ +P S+ ++YQE
Sbjct: 284 AVYHAGLNSKVRSAVLDDWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQE 343
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT 408
SGRAGRD S +Y+ ++ +E++++
Sbjct: 344 SGRAGRDQQPSRSVLYYGLDDRRRMEFILRN 374
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 214/409 (52%), Gaps = 59/409 (14%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + D F+ MPTG G + + + PG +
Sbjct: 195 IFGNKAFR-PLQHEACKAAASK-QDCFILMPTGG----GKSLCYQLPATVQPGVTVV--- 245
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
ISP+LS + L+F T + S QT ++ +L
Sbjct: 246 --------ISPLLSLIQDQIVTLNLKFGIPST-------------FLNSQQTSSQAAVVL 284
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+ELR KP KLLYVTPER T+SF +L+ + +LA VVDEAHCVS+WGHDFRP Y
Sbjct: 285 QELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPDY 344
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIF 274
R LG L+Q +P++ALTATA SV++D++ L+ P+ + +F R NL Y+V+
Sbjct: 345 RNLGCLKQ-NFPDVPVMALTATATHSVREDVLKALRI--PHALILERSFDRPNLKYEVVC 401
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
K+ + +FI K+ N CGI+YC ++ ++++ L +K
Sbjct: 402 K--TKEPLVQLGQFI-----KERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAG 454
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R VQ+ + G+I ++ ATI+FGMGID+ +VRFV+H M SI +YYQESGRAGR
Sbjct: 455 LAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGR 514
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG + C + + + + +++ K E ++ M ++CE
Sbjct: 515 DGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCE 563
>gi|402471219|gb|EJW05076.1| RecQ family ATP-dependent DNA helicase [Edhazardia aedis USNM 41457]
Length = 1768
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 223/411 (54%), Gaps = 58/411 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F +F+ Q+K + L D+FV MPTG G + + I G +
Sbjct: 1060 LRHVFKLQNFRS--QQKEVIEAALSHDDVFVLMPTGG----GKSICFQLPAIITDGITLV 1113
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDD-KTSIVTGRSDLYQLELIVSGQ-TKTENKAILEE 157
+SP+LS + ++ K +I+ L +S Q T+TE + + E
Sbjct: 1114 -----------VSPLLSLIQDQIKNLLKKNIIA---------LAISSQLTETERRFVFEI 1153
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
L+ P K+ YVTPE V S L Q ++R K+A IV+DEAHCVS+WGHDFRP Y+R
Sbjct: 1154 LKQPDPICKIFYVTPELIVNSS---LFQDIIRKTKVARIVIDEAHCVSQWGHDFRPDYKR 1210
Query: 218 LGE-LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+G + + IP++ALTATA P V++DII+ L+ + K+F S R NL Y +
Sbjct: 1211 VGTVIEDLFEHKIPLMALTATASPRVREDIINALRM-RNIKIFAMSFNRPNLVY-FVRKK 1268
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VN 325
+ KD + FI + GIIYC +++ +++ K ++
Sbjct: 1269 MSKDVDTEIVSFISTHYPES-----SGIIYCLSQKDCEMISERYNDKYGLKTRFYHAGLS 1323
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
K+ER Q ++ + +I ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGRDG
Sbjct: 1324 KNERIETQNAWNENKFLIIVATIAFGMGIDKKDVRFVIHYSLPKSLEGYYQETGRAGRDG 1383
Query: 386 LQSYCRIYHSEHSKKSLEYVI---KTDTSTKREQLELKFKNYLSMLEYCEQ 433
L S C +++S KK LE++I KT ++ K ++LEL+ +++YCE
Sbjct: 1384 LNSTCILFYSFKDKKILEFMIDHSKTGSNKKLQRLELQ-----KVIDYCEN 1429
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/407 (36%), Positives = 210/407 (51%), Gaps = 47/407 (11%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K FGF+ F+ E Q++ I +L + D FV MPTG G + + G +
Sbjct: 2 KKTFGFNQFR-ENQREIINSVL-DSKDTFVLMPTGG----GKSLCYQIPGLYQQGVTIV- 54
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
+SP++S +D+ + Y + SG T + K + +LR
Sbjct: 55 ----------VSPLIS-----LIEDQVKFLLALD--YPAAALCSGITSDDAKKVFRDLRS 97
Query: 161 VKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
P+ +LLYVTPER A E+F +L L + K IV+DEAHCVS+WGHDFRP Y+ L
Sbjct: 98 NSPKTRLLYVTPERVASNETFMDILGDLYQKGKFMRIVIDEAHCVSQWGHDFRPDYKELS 157
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ S+PI+ALTATA V+ DII L KP FK S R NL+Y V+ K
Sbjct: 158 ILRK-NFPSVPILALTATATEKVRNDIILNLNMKKPV-CFKQSFNRPNLYYHVMKKP--K 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHE 328
D + EFI+K + GIIYC ++ ++ L + + H
Sbjct: 214 DVSKQMAEFIKK-----QYPDKSGIIYCLSKYDCEKISGDLNTEYGIKSAYYHAGMEIHS 268
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R++VQ+ + +G I VI ATI+FGMGI++ +VRFV H +P S+ YYQESGRAGRDGL+S
Sbjct: 269 RNQVQDRWQKGRIKVIVATIAFGMGINKPDVRFVFHHSIPKSLEGYYQESGRAGRDGLKS 328
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFK--NYLSMLEYCEQ 433
+C +Y+ K +E +I + LK N M+ YCE
Sbjct: 329 HCILYYKWADKLRIETLIMLSSKENGTHYNLKESKTNLNKMVSYCEN 375
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/412 (33%), Positives = 217/412 (52%), Gaps = 49/412 (11%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
++ L LK FG+DSF+ +K I L+ D+ + MPTG G + +
Sbjct: 10 NQPSLEQHLKNYFGYDSFRP--GQKQIIQTALQQKDLLIIMPTGG----GKSLCFQMPAL 63
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ PG + +SP++S + K + + L+L + + T+
Sbjct: 64 LKPGLTIV-----------VSPLISLMQDQVESLKDNGIAATFLNSTLDLTETRRRSTD- 111
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
++ +IKLLYV PER ++E F L+ + ++ +DEAHCVSEWGHDF
Sbjct: 112 --------IILGKIKLLYVAPERLLSEKFLEFLELISSQQGISTFAIDEAHCVSEWGHDF 163
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR+L LR+ T +PI+ALTATA V++DI + L KPY + S FRSNL+Y+
Sbjct: 164 RPEYRQLKLLRE-TYPDVPIMALTATATKRVREDITTQLNLQKPY-IHIASFFRSNLYYE 221
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K+++A + + I G GI+YC +R+ ++A LR+
Sbjct: 222 VRQKTSAKNTFAEILQIIRTIGG-------SGIVYCNSRKRVDEIAYKLRQNNVSALAYH 274
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ ER+ Q F+R +++VI AT++FGMGID+ +VRFV+H+ + +I YYQE+GR+
Sbjct: 275 AGMTDEERTTNQTKFIRDDVDVIVATVAFGMGIDKPDVRFVIHYDLSKNIEGYYQETGRS 334
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR--EQLELKFKNYLSMLE 429
GRDG + C ++ S K+S+EY+I K D +R EQ + NY E
Sbjct: 335 GRDGEPAQCILFFSYGDKRSIEYLIGQKVDEQEQRIAEQQLRRIINYAEATE 386
>gi|225444694|ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
vinifera]
Length = 730
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 213/422 (50%), Gaps = 59/422 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
++ L L+ FG F+ Q +AI IL D F MPTG + + A ++
Sbjct: 21 KEALVKLLRWHFGHAEFRGR-QLEAIEAIL-SGRDCFCLMPTGGGKSMCYQIPALAK--- 75
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + + P+++ + ++ + E + S QT
Sbjct: 76 -PGIVLV-----------VCPLIALM-------ENQVMALKEKGIAAEFLSSTQTTKVRD 116
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I E+L+ KP ++LLYVTPE T F L + L I +DEAHC+S WGHDFR
Sbjct: 117 KIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWGHDFR 176
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+YR+L LR + +PI+ALTATA P V++D+I L P V K+S R N++Y+V
Sbjct: 177 PSYRKLSSLRNHLPD-VPILALTATAVPKVQKDVIESLCLQNPL-VLKSSFNRPNIYYEV 234
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ DLL D YA + + ++ C N CGI+YC R +L+ L +
Sbjct: 235 RYKDLLDDVYADLSKLLKSC------GNVCGIVYCLERTTCDELSAHLSKNGISSAAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+N RS V + ++ +I V+ AT++FGMGIDR++VR V H+ +P S+ A+YQESGRAG
Sbjct: 289 GLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAG 348
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKT------------DTSTKREQLELKFKNYLSMLEY 430
RD L S +Y+ +K +E+++ D +K+ ++ M+EY
Sbjct: 349 RDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKS-----LADFSHMVEY 403
Query: 431 CE 432
CE
Sbjct: 404 CE 405
>gi|260062261|ref|YP_003195341.1| ATP-dependent DNA helicase [Robiginitalea biformata HTCC2501]
gi|88783823|gb|EAR14994.1| putative ATP-dependent DNA helicase [Robiginitalea biformata
HTCC2501]
Length = 733
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 209/384 (54%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++E +L A LK FGF FK LQ+ I++I+ + D FV MPTG G + +
Sbjct: 3 LNETDLKASLKKYFGFSQFKG-LQEDVIKNIV-QGRDTFVIMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKT 149
I G + +SP+++ ++ + G SD + ++ S TK
Sbjct: 57 LIGEGTAIV-----------VSPLIA-----LMKNQVDAIRGVSDNDGVAHVLNSSLTKG 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E KA+ E++ KLLYV PE E + LQ + L+++ +DEAHC+SEWGH
Sbjct: 101 EVKAVKEDI--TSGVTKLLYVAPESLTKEEYVDFLQGVT----LSFVAIDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + G+ IPIIALTATA P V++DI+ L + +VFK S R NL+
Sbjct: 155 DFRPEYRNLRSIIDRLGDDIPIIALTATATPKVQEDILKNLGIPEA-EVFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-------- 321
Y+V K+ A + F++K GK GIIYC +R+ +LA L+
Sbjct: 214 YEV--QPKTKNVDADIIRFVKKNAGK------SGIIYCLSRKRVEELAQVLQVNGVSAVP 265
Query: 322 --RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ RSR Q+ F+ E++V+ ATI+FGMGID+ +VR+V+H +P SI +YYQE+G
Sbjct: 266 YHAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRYVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 210/411 (51%), Gaps = 62/411 (15%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG SF+ LQ +A R + D F+ MPTG G + + + PG +
Sbjct: 219 IFGNKSFR-PLQYEACR-AAMNNQDCFILMPTGG----GKSLCYQLPATLHPGVTVV--- 269
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
+SP+LS D+ +T + + + S QT + A+++ELR
Sbjct: 270 --------VSPLLS-----LIQDQIVALTYKFAI-PAAFLNSQQTPAQASAVIQELRYGT 315
Query: 163 PRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P KLLYVTPER A SF +L+ L + LA V+DEAHCVS+WGHDFRP YR LG L
Sbjct: 316 PSFKLLYVTPERIAANYSFMEMLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCL 375
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI-------- 273
+Q +PI+ALTATA SV++D++S L+ + K S R NL Y+VI
Sbjct: 376 KQ-NFPRVPIMALTATATESVRKDVLSALRIPNAV-ILKRSFDRLNLNYEVIGKTKTPQK 433
Query: 274 -FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
DLLK+ + N GI+YC ++ D A LR K
Sbjct: 434 QLGDLLKERFM----------------NKSGIVYCLSKNECADTAKFLREKYKIKCAHYH 477
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ +R+ VQE + GE+ VI ATI+FGMGID+ +VRFV+H M SI +YYQESGRA
Sbjct: 478 AGLAARQRTSVQEKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRA 537
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRD L ++C + + + + +++ + K E ++ + M YCE
Sbjct: 538 GRDDLPAHCIVLYQKKDFSRIVCMLRNADNFKSESFKVAMEQAKKMQTYCE 588
>gi|344201636|ref|YP_004786779.1| RecQ familyATP-dependent DNA helicase [Muricauda ruestringensis DSM
13258]
gi|343953558|gb|AEM69357.1| ATP-dependent DNA helicase, RecQ family [Muricauda ruestringensis
DSM 13258]
Length = 733
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/380 (37%), Positives = 208/380 (54%), Gaps = 48/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L + LK FGF FK LQ+ I++IL +D FV MPTG G + + +
Sbjct: 7 DLHSSLKKYFGFSKFKG-LQEDVIQNIL-SGNDTFVIMPTGG----GKSLCYQLPAIMEE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + +SP+++ ++ + G S+ + + ++ S TKTE +
Sbjct: 61 GTAIV-----------VSPLIA-----LMKNQVDAIRGISEQHGIAHVLNSSLTKTEVRQ 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ E++ K KLLYV PE E L+++ KL+++ VDEAHC+SEWGHDFRP
Sbjct: 105 VKEDI--TKGVTKLLYVAPESLTKEENVDFLKNV----KLSFVAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR L + G++IPII LTATA P V++DII L KVFK S R NLFY+V
Sbjct: 159 EYRNLRGIINRLGDNIPIIGLTATATPKVQEDIIKNLGMTDA-KVFKASFNRPNLFYEV- 216
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
KD A + F+++ GK GIIYC +R+ +LA L+
Sbjct: 217 -RPKTKDVDADIIRFVKQNQGK------SGIIYCLSRKRVEELAQVLQVNGVSAVPYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ RS+ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAGR
Sbjct: 270 FDAKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + +C Y++ + LE
Sbjct: 330 DGGEGHCLAYYAYKDVEKLE 349
>gi|449681040|ref|XP_002164474.2| PREDICTED: ATP-dependent DNA helicase Q5-like [Hydra
magnipapillata]
Length = 461
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 188/341 (55%), Gaps = 37/341 (10%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q+ L+ F F +K LQ +AI+ I D+FV PTG S +S
Sbjct: 6 QDCLKVLRETFKFQDYKSGLQAQAIKKIAGGEKDVFVCFPTG---------SGKSLCYQL 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
P +LN V N SP+L+ + R S+ D L V+ + +
Sbjct: 57 PA---VLNKKV---NLVFSPLLALINDQLR----SLEEFGIDAKTLNSQVAPRARD---I 103
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
IL +L+ P+IKLLYVTPE A T +F+ +L L R NKL + VDEAHCVS+WGHDFRP
Sbjct: 104 ILNDLKCKNPKIKLLYVTPELASTSNFYEILCSLRRRNKLGFFAVDEAHCVSQWGHDFRP 163
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
+Y +LG LR+ S IALTATA VK+DII L P +F+T++FRSNLFYDV
Sbjct: 164 SYLKLGRLRRDFPES-QWIALTATATKKVKEDIIKSLCLVPPVAIFRTNSFRSNLFYDVR 222
Query: 274 FDDLLKDSYAHVKEFIEKCLG-KDN---KANNCGIIYCRTREHTTDLADALRRK------ 323
F D L + + F+E CL KDN K CGIIYCRTRE ++A+ + +K
Sbjct: 223 FKDFLDNPIDDLYNFLEGCLKLKDNIPLKERGCGIIYCRTREECHNIAEKITKKGLLAKA 282
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVR 360
+ K ++ VQ +M G + +I ATISFGMG+D+Q+VR
Sbjct: 283 YHSALTKDKKLEVQNQWMDGFVPIICATISFGMGVDKQSVR 323
>gi|30690461|ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName:
Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis thaliana]
gi|332661156|gb|AEE86556.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 713
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 215/428 (50%), Gaps = 42/428 (9%)
Query: 15 KSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPT 74
KS N Q ++ L L+ FG F+ + Q +AI+ ++ D F MPT
Sbjct: 3 KSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGK-QLEAIQAVV-SGRDCFCLMPT 60
Query: 75 GAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS 134
G + + A ++ PG + +SP+++ + ++ +
Sbjct: 61 GGGKSICYQIPALAK----PGIVLV-----------VSPLIALM-------ENQVMALKE 98
Query: 135 DLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLA 194
E + S Q I E+L KP ++LLYVTPE T+ F L+ L L
Sbjct: 99 KGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLN 158
Query: 195 YIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNK 254
I +DEAHC+S WGHDFRP+YR+L LR + +P++ALTATA P V++D+I L
Sbjct: 159 LIAIDEAHCISSWGHDFRPSYRQLSTLRDSLAD-VPVLALTATAAPKVQKDVIDSLNLRN 217
Query: 255 PYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTT 314
P V K+S R N+FY+V + DLL ++Y + ++ C N C IIYC R
Sbjct: 218 PL-VLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSC------GNICAIIYCLERTTCD 270
Query: 315 DLA----------DALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
DL+ A +N RS V + ++ + +I AT++FGMGID+++VR V H
Sbjct: 271 DLSVHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCH 330
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNY 424
+ +P S+ ++YQESGRAGRD L S +Y+ +K +EY+++ + K + ++
Sbjct: 331 FNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDF 390
Query: 425 LSMLEYCE 432
++ YCE
Sbjct: 391 EQIVTYCE 398
>gi|307107282|gb|EFN55525.1| hypothetical protein CHLNCDRAFT_133956 [Chlorella variabilis]
Length = 817
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 134/399 (33%), Positives = 212/399 (53%), Gaps = 29/399 (7%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
A LK +FG SF+ E ++ I L D FV MPTG G ++ + + PG
Sbjct: 278 ANLK-VFGNSSFRSE--QRQIIEAALSGRDCFVLMPTGG----GKSLTYQLPAVLTPGVT 330
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
+ ++P+LS +D ++ S + S QT E +A+ E
Sbjct: 331 VV-----------VTPLLS----LMQDQVQALTLLPSGGVPTTYLSSQQTVAETRAVFLE 375
Query: 158 LRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
L +P IKLLYVTPE+ V E L+ L + LA +VVDEAHCVS WGHDFRP Y+
Sbjct: 376 LGKARPTIKLLYVTPEQLVRGERLKGALRALHSHGLLARLVVDEAHCVSAWGHDFRPDYK 435
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+LG ++ +P++ALTATA P V+QDI+S L P + F+ S FR NL + D
Sbjct: 436 QLGAVKSSCLRGVPMMALTATATPKVRQDIMSTLHMAAP-RQFQVSFFRPNLCFR---KD 491
Query: 277 LLKDSYAHVKEFIEKCLGK-DNKANNCGIIYCRTREHTTDLADALRRKVNKHERSRVQES 335
+ + ++ ++E+ + N GI+YC +R++T + + A+ + +R +VQ
Sbjct: 492 YTRSEDSGLEGYMEEMMVYIQNHREGSGIVYCLSRDNT-ETSAAVHAGMTPKQRMQVQND 550
Query: 336 FMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHS 395
+ G + V+ ATI+FGMG+D+ +VR+V+H+ + S+ YYQE+GRAGRDG + C +Y++
Sbjct: 551 WRTGRVQVVVATIAFGMGVDKADVRYVIHFTLSKSMEGYYQEAGRAGRDGGPAECLLYYA 610
Query: 396 EHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
+ + ++ ++ + + M YCE G
Sbjct: 611 KRDVPRIVQLLHKGAKRAKQSFQRELDLLKQMQAYCEDG 649
>gi|291001553|ref|XP_002683343.1| predicted protein [Naegleria gruberi]
gi|284096972|gb|EFC50599.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 216/412 (52%), Gaps = 51/412 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F + F+ Q + I +++ D V +PTG G + + I PG +
Sbjct: 5 LKKYFKLEEFRPN-QFEIIFNLVKNKQDTLVILPTGG----GKSLCYQLPSLILPGVTLV 59
Query: 100 LNGNVRSRNGWISPILSSFYLRFRD-DKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP++S + + + D SI + + S Q K+E + I +L
Sbjct: 60 -----------VSPLISLMHNQVQALDHLSIPSNYWN--------SSQKKSEIQKIQSDL 100
Query: 159 RLVKPRIKLLYVTPERAVT-ESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
P KLLYVTPE + ++F +++ L ++L+ I +DE+HC+S WGHDFR ++R+
Sbjct: 101 ESGNPNYKLLYVTPELLTSNQTFQSIMRLLASRDQLSLIAIDESHCISSWGHDFRKSFRQ 160
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L L+ T +PIIALTATA V+ DI+ LK P K F TS R N+ Y++ + D+
Sbjct: 161 LNFLKD-TFPQVPIIALTATATEKVRSDIVESLKMRNP-KCFITSFNRPNISYEIRYKDI 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK----------- 326
L + Y ++ F+ + A CGIIYCRTR +L L + +K
Sbjct: 219 LHNPYEDLRNFL------NEHAQECGIIYCRTRNQVDELVLQLSMEKDKGGKDLFSCKSY 272
Query: 327 ------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER VQ ++ G+ +I TI++GMGID+++VRFVVH+GMP S+ +YQESGR
Sbjct: 273 HAGLKLSERKTVQTDWLEGKTKIIVGTIAYGMGIDKKDVRFVVHYGMPKSLEGFYQESGR 332
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG ++ +Y+ K S++++I + ++++ + + + E CE
Sbjct: 333 AGRDGKKAKSLLYYCSREKNSIQFLISREEKLTQDRILAVEQGFNKVCEMCE 384
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 210/405 (51%), Gaps = 50/405 (12%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG F+ LQ +A R + D F+ MPTG G + + + PG +
Sbjct: 213 IFGNKGFR-PLQYEACR-AAMDNQDCFILMPTGG----GKSLCYQLPATLHPGVTVV--- 263
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
+SP+LS D+ +T R + + S QT + A+++ELR K
Sbjct: 264 --------VSPLLSLI-----QDQIVALTYRFAV-PAAFLNSQQTSAQASAVIQELRCGK 309
Query: 163 PRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P KLLYVTPER VT SF L+ L + LA V+DEAHCVS+WGHDFRP YR LG L
Sbjct: 310 PAFKLLYVTPERIVTNYSFMETLRGLDQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCL 369
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
+Q +PI+ALTATA SV++D++ L+ V K S R NL Y+VI
Sbjct: 370 KQ-NFPRVPIMALTATATESVRKDVLGALRIPNAV-VLKRSFDRLNLNYEVI-------- 419
Query: 282 YAHVKEFIEKCLG---KDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K F +K LG K+ N GI+YC ++ D A LR K +
Sbjct: 420 -GKTKTF-QKQLGDLLKERFMNESGIVYCLSKNECADTAKFLREKYKIKCAHYHASLAAR 477
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
+R+ VQE + GE+ VI ATI+FGMGID+ +VRFV+H + SI +YYQESGRAGRD L
Sbjct: 478 QRTSVQEKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDELP 537
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
++C + + + + +++ + + E + + M YCE
Sbjct: 538 AHCIVLYQKKDFSRIVCMLRNGENFRSESFRVAMEQAKKMQAYCE 582
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 220/404 (54%), Gaps = 44/404 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +F D F+ QKK I LR D+FV MPTG G + + I G +
Sbjct: 269 LKTIFRLDEFRSN-QKKIIE-ASLRGDDVFVLMPTGG----GKSLCYQLPALINVGLTIV 322
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+LS +D +S++ L S T E I + +R
Sbjct: 323 -----------ISPLLS----LIQDQISSLLNKNIPAAALN---SNCTVGERDLIYKCIR 364
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
I+LLYVTPE ++ F +L+ L NK+ V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 365 DTN-LIRLLYVTPELLNNSDRFKGILKSLYCENKVCRFVIDEAHCVSQWGHDFRPDYKEL 423
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
+LRQ + ++PIIALTATA V+ DII+VL + K+FK+S R NL Y V+
Sbjct: 424 SKLRQ-SYPTVPIIALTATATKKVEVDIINVLNI-QNCKIFKSSFNRPNLIYRVL--PKT 479
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------NKHER 329
+ + FI + A++ GIIYC +++ +A+ L R + +K++R
Sbjct: 480 ATTILDIVSFINS-----HYADSPGIIYCTSKKECEKMAEELSRDLKITYYHGGLSKYDR 534
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
R+QE + N+I AT++FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRDGL+S
Sbjct: 535 IRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGLESI 594
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
C +Y+S K + ++I +T EQ + + + ++++YCE
Sbjct: 595 CILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVKYCEN 638
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/394 (35%), Positives = 213/394 (54%), Gaps = 55/394 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FG+D F+ ++AI +L+ D+ V MPTG + + A R+ G
Sbjct: 13 LEAALKHFFGYDDFRH--YQRAIIEQVLKNQDVLVIMPTGGGKSLCYQLPALLRL----G 66
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFR---DDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ +SP+++ + R D+ + S L T N+
Sbjct: 67 VTIV-----------VSPLIALMQDQVRSLEDNGIAATFLNSSL------------TFNE 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
E L++ IKLLY+ PER + SF LL+ + + L+ +DEAHCVSEWGHDFR
Sbjct: 104 VRDREQALLRGDIKLLYLAPERLMNPSFWPLLEQIQQTVGLSAFAIDEAHCVSEWGHDFR 163
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR+L +L+Q +P++ALTATA V+QDII L+ N P +VF + R NL+Y+V
Sbjct: 164 PEYRQLFQLKQ-QFPQVPVMALTATATERVRQDIIQQLRLNDP-QVFVSGFNRQNLYYEV 221
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K SY H+ + +++ G GIIYC +R+ ++A L++
Sbjct: 222 T--PKTKQSYDHLLKLVKQQSG-------AGIIYCLSRKRVNEIAFRLKQDGISALPYHA 272
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ER QE F+R ++ +I ATI+FGMGI++ +VRFV+H+ +P +I +YYQESGRAG
Sbjct: 273 GLSAKERQGNQEQFIRDDVRIIVATIAFGMGINKPDVRFVIHYDLPRTIESYYQESGRAG 332
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
RDG + C ++ S ++EY+I K D +R
Sbjct: 333 RDGDPANCTVFFSYADVATVEYLISQKPDEQEQR 366
>gi|38230500|gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
Length = 772
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 221/430 (51%), Gaps = 55/430 (12%)
Query: 20 TGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSL 79
TG++ +++ K + L L+ FG+ F+ + Q +AI +L D F MPTG
Sbjct: 12 TGSKDEKRTRK---ETLVKLLRWHFGYQDFRGK-QLEAIEAVL-SGRDCFCLMPTGGGKS 66
Query: 80 VGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL 139
+ + A ++ I +L +SP++ + + ++ +
Sbjct: 67 MCYQIPALAKHGI------VL---------VVSPLIENQVIALKEKGIAA---------- 101
Query: 140 ELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVD 199
E + S Q + I E+L KP ++LLYVTPE T F L + L I +D
Sbjct: 102 EFLSSTQHQVVRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAID 161
Query: 200 EAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVF 259
EAHC+S WGHDFRP+YR+L LR + +P++ALTATA P V+ D+I L P V
Sbjct: 162 EAHCISSWGHDFRPSYRKLSSLRNHLPD-VPVLALTATAAPKVQNDVIESLCLQDPL-VL 219
Query: 260 KTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADA 319
K+S R N++Y+V + DLL D+YA + ++ C + C I+YC R L+
Sbjct: 220 KSSFNRPNIYYEVRYKDLLDDAYADLPSVLKSC------GDVCAIVYCLERATCDGLSAH 273
Query: 320 LRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
L + +N RS V + ++ +I V+ AT++FGMGIDR++VR V H+ +P
Sbjct: 274 LSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPK 333
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT-------DTSTKREQLELKFK 422
S+ ++YQESGRAGRD L S +Y+ +K +E++++ +S+ E +
Sbjct: 334 SMESFYQESGRAGRDQLPSKSLLYYGVDDRKKMEFILRNAENKKLQSSSSGGELSKKSLT 393
Query: 423 NYLSMLEYCE 432
++ M+EYCE
Sbjct: 394 DFNLMIEYCE 403
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 219/423 (51%), Gaps = 46/423 (10%)
Query: 22 NQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVG 81
N+ D G ++E EL + LK+ FGF+ F+ QK+ I L+ HD FV MPTGA G
Sbjct: 213 NEVDLLGADMNE-ELYSTLKSKFGFNQFR-HRQKQCILSTLM-GHDTFVLMPTGA----G 265
Query: 82 SVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + I PG + +SP+ S D K + + E
Sbjct: 266 KSLCYQLPAVILPGVTVV-----------VSPLRS----LIEDQKMKM---KELGIGCEA 307
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDE 200
+ + T + ++ I +L P IKLLYVTPE+ + + + L R LA V+DE
Sbjct: 308 LTADLTASAHEEIYSDLSSENPTIKLLYVTPEKISASGRLSSVFYTLHRRGLLARFVIDE 367
Query: 201 AHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVF 259
AHCVS+WGHDFRP Y +L LR+ + +PIIALTATA P + D LK + K+F
Sbjct: 368 AHCVSQWGHDFRPDYTKLNTLREKYNNPPVPIIALTATATPKIVTDARDHLKM-QDSKLF 426
Query: 260 KTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL--- 316
+S R NL YD L+ + + +EK K GI+YC +R+ +
Sbjct: 427 ISSFVRDNLKYD-----LIPKAAKSLVNVVEKM--KQLYPGKSGIVYCLSRKECETVQMM 479
Query: 317 -------ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
A+ +N + R VQ+S++ + +VI ATI+FGMGID+ +VRFV+H+ +P
Sbjct: 480 LTKAGLSAEVYHAGLNDNLRVSVQKSWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPK 539
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE 429
SI YYQE+GRAGRDG+ SYC + +S H L +I+ +T + + N L ++
Sbjct: 540 SIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVR-SMHLNNVLQVVA 598
Query: 430 YCE 432
YCE
Sbjct: 599 YCE 601
>gi|255542856|ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative [Ricinus communis]
Length = 586
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 230/459 (50%), Gaps = 70/459 (15%)
Query: 5 ESKDASSAVGKSSSLTGNQQDRKGGKVSEQELTA--KLKAL----------FGFDSFKCE 52
E K + SA S+S N++ G + + + + +L+AL FG SF+
Sbjct: 150 EGKSSLSATSGSASSICNKKKHPGIQKDGRPMLSYEELQALDDFELANVVIFGNMSFR-P 208
Query: 53 LQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWIS 112
LQ +A + + + D FV MPTG G + + + PG + +S
Sbjct: 209 LQHQACKASVAK-RDCFVLMPTGG----GKSLCYQLPATLKPGVTVV-----------VS 252
Query: 113 PILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRI 165
P+LS + L+F T + S QT ++ A+L+ELR KP
Sbjct: 253 PLLSLIQDQIITLNLKFGIPAT-------------FLNSQQTASQAAAVLQELRKDKPSC 299
Query: 166 KLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQF 224
KLLYVTPER A F +L+ L +LA VVDEAHCVS+WGHDFRP YR LG L+Q
Sbjct: 300 KLLYVTPERIAGNLGFLEILKCLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGCLKQ- 358
Query: 225 TGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAH 284
+P++ALTATA SV++DI+ L+ V +TS R NL Y+VI K+S
Sbjct: 359 NFRDVPLVALTATATHSVREDILKALRIPNAL-VLETSFDRPNLKYEVIGK--TKESLKQ 415
Query: 285 VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVN-----------KHERSRVQ 333
V + + KD N CGI+YC ++ ++++ L K +R VQ
Sbjct: 416 VGQLL-----KDRFKNQCGIVYCLSKNECIEVSNFLNDKCKIKTVYYHAGLATRQRVEVQ 470
Query: 334 ESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIY 393
+ GE +++ ATI+FGMGID+ +VRFV+H + SI +YYQESGRAGRD L + C
Sbjct: 471 RKWHMGEAHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDNLPAACIAL 530
Query: 394 HSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ + + ++++ KRE + M +YCE
Sbjct: 531 YQKKDFSRVVCMLRSGQGYKRESFKTAMAQAQKMQQYCE 569
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 220/404 (54%), Gaps = 44/404 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +F D F+ QKK I LR D+FV MPTG G + + I G +
Sbjct: 269 LKTIFRLDEFRSN-QKKIIE-ASLRGDDVFVLMPTGG----GKSLCYQLPALINVGLTIV 322
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+LS +D +S++ L S T E I + +R
Sbjct: 323 -----------ISPLLS----LIQDQISSLLNKNIPAAALN---SNCTVGERDLIYKCIR 364
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
I+LLYVTPE ++ F +L+ L NK+ V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 365 DTN-LIRLLYVTPELLNNSDRFKGILKSLYCENKVCRFVIDEAHCVSQWGHDFRPDYKEL 423
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
+L+Q + ++PIIALTATA V+ DII+VL + K+FK+S R NL Y V+
Sbjct: 424 SKLKQ-SYPTVPIIALTATATKKVEVDIINVLNI-QNCKIFKSSFNRPNLIYRVL--PKT 479
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------NKHER 329
+ + FI + A++ GIIYC +++ +A+ L R + +K++R
Sbjct: 480 ATTILDIVSFINS-----HYADSPGIIYCTSKKECEKMAEELSRDLKITYYHGGLSKYDR 534
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
R+QE + N+I AT++FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRDGL+S
Sbjct: 535 IRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGLESI 594
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
C +Y+S K + ++I +T EQ + + + ++++YCE
Sbjct: 595 CILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVKYCEN 638
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 152/424 (35%), Positives = 220/424 (51%), Gaps = 57/424 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ +L +F F+ E Q +AI + L D+FV MPTG + + A
Sbjct: 608 QEVADRLTKVFKMKGFR-ENQFQAI-NATLSGKDVFVLMPTGGGKSLTYQLPA------- 658
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL---IVSGQTKTE 150
I G R +SP+LS + + L QL + +++G+T E
Sbjct: 659 ----LIQTGKTRGVTVVVSPLLSLMQDQVQH-----------LKQLGIQAFLINGETTPE 703
Query: 151 NKAILEELRLVKPRI----KLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+K + + L KP + +LLYVTPE +E+ + L R K A +V+DEAHCVS
Sbjct: 704 DKRRVMDA-LWKPNVEQFVQLLYVTPEMLGKSENMLRAFEGLHRRGKFARLVIDEAHCVS 762
Query: 206 EWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKF--NKPYK--VFK 260
+WGHDFRP Y+ LGE+RQ F G +P++ALTATA V++D + L N P K VF
Sbjct: 763 QWGHDFRPDYKNLGEIRQRFPG--VPLMALTATATTRVREDTMHNLGMEKNNPDKCQVFT 820
Query: 261 TSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
S R NL+Y+V K+ + + + I KD+ GIIYC +R + D+A AL
Sbjct: 821 QSFNRENLYYEVRPKPKGKEGISAMADII-----KDSHPRETGIIYCLSRANCEDIAKAL 875
Query: 321 RRK-----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
++ + E+S VQE + G I VI ATI+FGMGID+ NVRFV+H +P
Sbjct: 876 QKTHKIRAQHYHAGLKGSEKSMVQEEWQAGRIKVIVATIAFGMGIDKSNVRFVIHHTIPK 935
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTST-KREQLELKFKNYLSML 428
S+ YYQE+GRAGRDG S C + + L +I + RE +++ + M+
Sbjct: 936 SLEGYYQETGRAGRDGNPSRCYLLYGYGDAGKLRRMIDDPKNEGSREVKDMQHQMLRKMI 995
Query: 429 EYCE 432
+YCE
Sbjct: 996 QYCE 999
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 208/402 (51%), Gaps = 44/402 (10%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG SF+ LQ +A L D F+ MPTG G + + + PG +
Sbjct: 192 IFGNKSFR-PLQYEAC-SAALNNRDCFILMPTGG----GKSLCYQLPATLHPGVTVV--- 242
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
+ P+LS D+ +T + + Q + S QT ++ +++ELR
Sbjct: 243 --------VCPLLS-----LIQDQVVALTFKFGI-QASFLNSQQTSSQASVVMQELRNGT 288
Query: 163 PRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P KLLYVTPER V SF +L+ L + LA V+DEAHCVS+WGHDFRP YR LG L
Sbjct: 289 PSFKLLYVTPERMVGNYSFMEILRGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRALGCL 348
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
+Q +PI+ALTATA +V++DI+S L+ V K S R NL Y VI K
Sbjct: 349 KQ-NFPRVPIMALTATATEAVRKDILSTLRVPNAL-VLKRSFDRLNLNYMVIGK--TKTP 404
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHERS 330
+ E + K+ N GI+YC ++ D A LR K + +R+
Sbjct: 405 QMQLGELL-----KERFMNMSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRT 459
Query: 331 RVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYC 390
VQE + RGE+ VI ATI+FGMGID+ +VRFV+H + SI +YYQESGRAGRD L ++C
Sbjct: 460 SVQEKWHRGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDDLPAHC 519
Query: 391 RIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ + + + +++ + K E ++ M YCE
Sbjct: 520 VVLYQKKDFSRIVCMLRNGDNFKSETFKVAMDQAKKMQAYCE 561
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/411 (36%), Positives = 211/411 (51%), Gaps = 62/411 (15%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG SF+ LQ +A R + D FV MPTG G + + + PG +
Sbjct: 181 IFGNKSFR-PLQYEACR-AAVSNMDTFVLMPTGG----GKSLCYQLPATLHPGVTVV--- 231
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
+ P+LS +D+ + + + + S QT +++ A+++ELR K
Sbjct: 232 --------VCPLLS-----LIEDQIVALNFKFAI-PAAFLNSQQTPSQSSAVIQELRSGK 277
Query: 163 PRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P KLLYVTPER A SF +L L + LA V+DEAHCVS+WGHDFRP YR LG L
Sbjct: 278 PSFKLLYVTPERMAGNSSFIGILIGLHQRGLLARFVIDEAHCVSQWGHDFRPDYRGLGCL 337
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI-------- 273
+Q +PI+ALTATA SV +DI+S L+ V K S R+NL Y+VI
Sbjct: 338 KQ-NFPRVPIMALTATATASVCKDILSTLRIPNA-TVLKRSFDRTNLNYEVIGKTKTPQK 395
Query: 274 -FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
DLLK+ + ++ GI+YC ++ D A LR K
Sbjct: 396 QLGDLLKERFMNMS----------------GIVYCLSKNECADTAKFLREKYKIKCAHYH 439
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ +RS VQ + GE+ VI ATI+FGMGID+ +VRFV+H M SI +YYQESGRA
Sbjct: 440 AGLAARQRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRA 499
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRD L ++C + + + + +++ + K E ++ + M YCE
Sbjct: 500 GRDNLPAHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAMEQAKKMQTYCE 550
>gi|302782143|ref|XP_002972845.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
gi|300159446|gb|EFJ26066.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
Length = 602
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 174/293 (59%), Gaps = 22/293 (7%)
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+++ELR +P KLLYVTPE+ A + SF +L L R+ LA V+DEAHCVS+WGHDFR
Sbjct: 283 VMQELRKQRPSCKLLYVTPEKLAKSASFQDVLHGLDRHRLLARFVIDEAHCVSQWGHDFR 342
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK-VFKTSTFRSNLFYD 271
P Y+ LG L+Q +P++ALTATA SV++DI+S+L+ P+ V +TS R NL Y
Sbjct: 343 PDYKALGILKQ-QFPRVPLMALTATATHSVRKDILSILRI--PHATVIETSFDRPNLKYK 399
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V+ D KD + + I KD+ A CGI+YC ++ D+ D L K
Sbjct: 400 VVIKDP-KDPLEQLGKII-----KDDFARQCGIVYCLSKNECRDVCDYLSNKCKIKTAFY 453
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ ER VQ + + E+ VI ATI+FGMGID+ +VRFV+H M +I YYQESGR
Sbjct: 454 HAGLSNRERVLVQNKWQKNEVQVICATIAFGMGIDKADVRFVIHNTMSKAIEGYYQESGR 513
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
AGRDGL S C + + + + ++++ ++ + + M EYCE+
Sbjct: 514 AGRDGLSSTCLVLYQKKDFSRIACMLRSGYGRSKDSFKRGVEQGRKMQEYCEE 566
>gi|302805332|ref|XP_002984417.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
gi|300147805|gb|EFJ14467.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
Length = 605
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 121/293 (41%), Positives = 174/293 (59%), Gaps = 22/293 (7%)
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+++ELR +P KLLYVTPE+ A + SF +L L R+ LA V+DEAHCVS+WGHDFR
Sbjct: 285 VMQELRKQRPSCKLLYVTPEKLAKSASFQDVLHGLDRHRLLARFVIDEAHCVSQWGHDFR 344
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK-VFKTSTFRSNLFYD 271
P Y+ LG L+Q +P++ALTATA SV++DI+S+L+ P+ V +TS R NL Y
Sbjct: 345 PDYKALGILKQ-QFPRVPLMALTATATHSVRKDILSILRI--PHATVIETSFDRPNLKYK 401
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V+ D KD + + I KD+ A CGI+YC ++ D+ D L K
Sbjct: 402 VVIKDP-KDPLEQLGKII-----KDDFARQCGIVYCLSKNECKDVCDYLSNKCKIKTAFY 455
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ ER VQ + + E+ VI ATI+FGMGID+ +VRFV+H M +I YYQESGR
Sbjct: 456 HAGLSNRERVLVQNKWQKNEVQVICATIAFGMGIDKADVRFVIHNTMSKAIEGYYQESGR 515
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
AGRDGL S C + + + + ++++ ++ + + M EYCE+
Sbjct: 516 AGRDGLSSTCLVLYQKKDFSRIACMLRSGYGRSKDSFKRGVEQGRKMQEYCEE 568
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 153/422 (36%), Positives = 218/422 (51%), Gaps = 57/422 (13%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSAR 87
GK ++ LK FGF+ F+ QK AI LL +D FV MPTGA SL + S
Sbjct: 298 GKERRDQMYDVLKKKFGFNQFR-HRQKTAIIAALL-GYDCFVLMPTGAGKSLCYQLPS-- 353
Query: 88 SRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IV 143
+L+G V ISP+ K+ I ++ + QLE+ +
Sbjct: 354 -----------VLSGGV---TVVISPL-----------KSLIEDQKTKMKQLEINCCALT 388
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAH 202
S ++ E+ I L P+I LLYVTPE+ A +E + + L R L V+DEAH
Sbjct: 389 SDLSQAESDRIYAALSETNPKINLLYVTPEKIAASEKLNNVFASLHRRGLLTRFVIDEAH 448
Query: 203 CVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
C+S+WGHDFRP Y +L LR+ + +PI+ALTATA P + D L K+F +
Sbjct: 449 CISQWGHDFRPDYTKLHSLRKVYINPRVPIMALTATATPKIATDARDHLSMPNS-KLFIS 507
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCL-GKDNKANNCGIIYCRTREHTTDLADAL 320
S RSNL YDVI S + V E ++ GK GI+YC +R+ ++ +L
Sbjct: 508 SFVRSNLKYDVIAKR--PKSLSAVMERMKALYPGKS------GIVYCLSRKECETVSKSL 559
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + +R VQ ++ INVI ATI+FGMGID+ +VRFV+H+ MP S
Sbjct: 560 QNQGISADVYHAGLPDKQRQNVQAKWINNHINVICATIAFGMGIDKPDVRFVIHFSMPKS 619
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I YYQE+GRAGRDGL SYC + + + +I+ D ST + + N + ++ Y
Sbjct: 620 IEGYYQETGRAGRDGLTSYCALLYCYNDSIRARKMIEGDNSTVGVR-SMHLNNLMQVVAY 678
Query: 431 CE 432
CE
Sbjct: 679 CE 680
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 217/412 (52%), Gaps = 56/412 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FGFD F+ LQ++ I ++L D FV MPTG G + + PG +
Sbjct: 5 LKKYFGFDEFR-PLQREIIENVL-NKRDTFVLMPTGG----GKSLCYQLPALKFPGITLV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ + K S V E + S + E + I +E++
Sbjct: 59 -----------ISPLIALMKDQVDFLKASGVAA-------EFLNSSLSGDEIQRIQKEIK 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++K+LY+ PER + F LQ+L K + I VDEAHC+SEWGHDFRP YR L
Sbjct: 101 --EGKVKILYIAPERMASNGFENFLQNL----KPSLIAVDEAHCISEWGHDFRPDYRNLR 154
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L+ F G +PI+ALTATA V+QDI++ L F P +F +S R NLF+ VI
Sbjct: 155 RLKDIFPG--VPIMALTATATEKVRQDILNQLNFENP-NIFISSFNRDNLFFRVIEK--- 208
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+S+ + + +E N+ IIYC +R+ T +LA LR + ++ +
Sbjct: 209 KNSFEKLLKLLE------NRRKESVIIYCFSRKDTENLALNLRSEGFSALAYHAGLDSAK 262
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + QE F++ +IN+I ATI+FGMGID+ +VR VVH+ P S+ YYQE GRAGRDGL +
Sbjct: 263 RKKTQEDFIQDKINIIVATIAFGMGIDKPDVRMVVHYTFPKSLEGYYQEVGRAGRDGLPA 322
Query: 389 YCRIYHSEHSKKSLEYVIKT-DTSTKREQLELKFKNYLSM--LEYCEQGYFL 437
C ++++ + Y I D + Q E K + + L C + + L
Sbjct: 323 ECVMFYTFADARKHRYFINVMDDENLKRQTERKLQEVMDYADLNSCRRRHIL 374
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 219/406 (53%), Gaps = 48/406 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ + ++ + L D+FV MPTG G + + + G +
Sbjct: 228 LREVFKMKEFR--MNQREVIQACLSGKDVFVLMPTGG----GKSICYQLPALVYEGITIV 281
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+LS + R+ + D+ L I S ++ E + E LR
Sbjct: 282 -----------VSPLLSLVQDQIRN------LLQKDILALP-INSNLSRNERSLVFEALR 323
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ K+ YVTPE A + FH ++ LVR +L V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 324 SDELICKIFYVTPELIAKSGHFHDVVSELVRRGRLKRFVIDEAHCVSQWGHDFRPDYKEL 383
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--IFDD 276
G +R S+PIIALTATA V+ DI+ L + + FK S RSNL Y+V
Sbjct: 384 GSIR-IRYPSVPIIALTATATKKVELDILENLGI-RGCETFKMSFNRSNLRYEVRAKTST 441
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------KVNKH 327
+ D + V+ C CGIIYC +++ ++D L++ ++K+
Sbjct: 442 VELDIVSFVQTHFPDC---------CGIIYCTSKKECEMISDKLKKYMKTAFYHAGLSKN 492
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER+ VQE + +GE VI ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGRDGL+
Sbjct: 493 ERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLE 552
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
S C ++++ KK + ++I+ EQ + + ++ +++++CE
Sbjct: 553 SVCVLFYTYGDKKKISFMIEKGDGG-YEQKQRQREDLEAVIQFCEN 597
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI L D F+ MPTG G + + I PG +
Sbjct: 615 FGLHRFRTN-QLEAINACLC-GEDCFILMPTGG----GKSLCYQLPGCISPGVTIV---- 664
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T E +I +L
Sbjct: 665 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDAEAASIYLQLS 706
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + +++L LA V+DEAHCVS+WGHDFRP Y+RL
Sbjct: 707 KKDPIIKLLYVTPEKVCASTRLISTMENLYERQLLARFVIDEAHCVSQWGHDFRPDYKRL 766
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P VK+DI++ LK KP ++F S R NL Y+V+
Sbjct: 767 NVLRQ-KFQSVPMMALTATANPRVKKDILNQLKMTKP-QIFTMSFNRDNLKYEVLPKKPK 824
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ + V E+I+K + N+ GIIYC +R +AD L+++ +
Sbjct: 825 RVALDCV-EWIKK-----HHPNDSGIIYCLSRHECDTMADTLQKEGLAALAYHAGLADSN 878
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + + VI ATI+FGMGID+ +VR+V+H +P S+ YYQESGRAGRDG
Sbjct: 879 RDYVQHKWINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGET 938
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S H + +I+ + + F N SM+ YCE
Sbjct: 939 SHCLLFYSYHDVTRIRRLIQMEKDGNSHTKQTHFNNLYSMVHYCE 983
>gi|297802358|ref|XP_002869063.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
gi|297314899|gb|EFH45322.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 220/427 (51%), Gaps = 38/427 (8%)
Query: 30 KVSEQELTAKL-KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
KV+ +E KL + FG F+ + Q +AI+ ++ D F MPTG + + A +
Sbjct: 17 KVAGKEALVKLLRWHFGHADFRGK-QLEAIQAVV-SGRDCFCLMPTGGGKSICYQIPALA 74
Query: 89 RVRIPPGADFILNGNVRSRNGWISP--------ILSSFYLRFRD-DKTSIVTGRSDLYQL 139
+ PG +++ + S +S +LS F+ F + ++ +
Sbjct: 75 K----PGIVLVVSPLIESLFLLVSLTMCFVSTLMLSCFFFNFSALMENQVMALKEKGIAA 130
Query: 140 ELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVD 199
E + S Q I E+L KP ++LLYVTPE T+ F L+ L L I +D
Sbjct: 131 EYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAID 190
Query: 200 EAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVF 259
EAHC+S WGHDFRP+YR+L LR + +P++ALTATA P V++D+I L P V
Sbjct: 191 EAHCISSWGHDFRPSYRQLSTLRDSLAD-VPVLALTATAAPKVQKDVIDSLNLQNPL-VL 248
Query: 260 KTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL--- 316
K+S R N+FY+V + DLL ++Y + ++ C N C IIYC R DL
Sbjct: 249 KSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSC------GNICAIIYCLERTTCDDLSVH 302
Query: 317 -------ADALRRKVNKHERSRVQESFMRGEINVITATISFG----MGIDRQNVRFVVHW 365
+ A +N RS V + ++ + +I AT++FG +GID+++VR V H+
Sbjct: 303 LSSIGISSSAYHAGLNSKLRSTVLDDWLSSKKQIIVATVAFGSMGHVGIDKKDVRMVCHF 362
Query: 366 GMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL 425
+P S+ ++YQESGRAGRD L S +Y+ +K +EY+++ + K + ++
Sbjct: 363 NIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSPSSKKPTSDFE 422
Query: 426 SMLEYCE 432
++ YCE
Sbjct: 423 QIVTYCE 429
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 205/395 (51%), Gaps = 55/395 (13%)
Query: 34 QELTAKLKALFGFDSFKC-ELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
Q+L FG SF+ +LQ + + L HD FV MPTG + ++VS
Sbjct: 393 QDLIKMFHLKFGLKSFRTNQLQ---VMNAALLGHDCFVLMPTGGGKSLCYQLPAIVSQGV 449
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
V I P IL D T +VT D+ L SG K
Sbjct: 450 TVVISPLRSLIL-----------------------DQVTKLVT--LDIKACHL--SGDVK 482
Query: 149 -TENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
+E I +L + +P IKLLYVTPE+ + S + L N LA V+DEAHCVS+
Sbjct: 483 ESEVVDIYRKLNMPEPEIKLLYVTPEKVGASTSLRNIFSRLYNRNMLARFVIDEAHCVSQ 542
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP Y++L ELR+ N + I+ALTATA P V+ DI+ LK P K F +S RS
Sbjct: 543 WGHDFRPDYKKLRELRENYPN-VNIMALTATATPRVRIDILHQLKVKSP-KWFLSSFNRS 600
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----- 321
NL Y + + K + + I++ +D GIIYC +R+ D+A L+
Sbjct: 601 NLCY-AVKEKKGKSTLKDIAALIQQEFSRDT-----GIIYCFSRKECEDVARDLKVHGIG 654
Query: 322 -----RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+N ER++ Q +M G++ V+ ATI+FGMGID+ +VR+V H+ +P SI YYQ
Sbjct: 655 AIPYHAGLNDTERTKAQNLWMNGKVKVVCATIAFGMGIDKLDVRYVFHYSLPKSIEGYYQ 714
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS 411
ESGRAGRDG ++ C +Y+S K + +I D S
Sbjct: 715 ESGRAGRDGEKATCILYYSYRDKHRMLKLINMDQS 749
>gi|30690466|ref|NP_849500.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|332661157|gb|AEE86557.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 620
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 170/303 (56%), Gaps = 18/303 (5%)
Query: 140 ELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVD 199
E + S Q I E+L KP ++LLYVTPE T+ F L+ L L I +D
Sbjct: 11 EYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAID 70
Query: 200 EAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVF 259
EAHC+S WGHDFRP+YR+L LR + +P++ALTATA P V++D+I L P V
Sbjct: 71 EAHCISSWGHDFRPSYRQLSTLRDSLAD-VPVLALTATAAPKVQKDVIDSLNLRNPL-VL 128
Query: 260 KTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA-- 317
K+S R N+FY+V + DLL ++Y + ++ C N C IIYC R DL+
Sbjct: 129 KSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSC------GNICAIIYCLERTTCDDLSVH 182
Query: 318 --------DALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
A +N RS V + ++ + +I AT++FGMGID+++VR V H+ +P
Sbjct: 183 LSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPK 242
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE 429
S+ ++YQESGRAGRD L S +Y+ +K +EY+++ + K + ++ ++
Sbjct: 243 SMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTSDFEQIVT 302
Query: 430 YCE 432
YCE
Sbjct: 303 YCE 305
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 215/413 (52%), Gaps = 66/413 (15%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + L + D F+ MPTG G + + + PG +
Sbjct: 205 IFGNRTFR-PLQHQACKAALAK-QDSFILMPTGG----GKSLCYQLPATLQPGVTVV--- 255
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+SP+LS + L+F T + S QT ++ A+L
Sbjct: 256 --------VSPLLSLIQDQIITLNLKFGIPST-------------FLNSQQTASQVTAVL 294
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR KP KLLYVTPER A +SF +L+ + + +LA VVDEAHCVS+WGHDFRP
Sbjct: 295 QELRKDKPSCKLLYVTPERIAGNQSFLEILKFMHQKGQLAGFVVDEAHCVSQWGHDFRPD 354
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI 273
YR LG L+ + +P++ALTATA +V++DI+ L+ P+ + +F R NL Y+VI
Sbjct: 355 YRGLGSLKLHFPD-VPVMALTATATHAVREDILKALRI--PHALVLERSFDRPNLKYEVI 411
Query: 274 FDDLLKDSYAHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLADALRRKVN----- 325
A KE +++ LG+ D N CGI+YC ++ +++ L K
Sbjct: 412 ---------AKTKEPLKQ-LGQLLIDRFRNQCGIVYCLSKSECVEVSKFLNEKCKIKTVY 461
Query: 326 ------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+R VQ+ + GE++++ ATI+FGMGID+ +VRFV+H M SI +YYQESG
Sbjct: 462 YHAGLAARQRVAVQKKWYDGEVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESG 521
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRD S C + + + +I+ K+E + M EYCE
Sbjct: 522 RAGRDNFPSVCIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKKMQEYCE 574
>gi|295133000|ref|YP_003583676.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981015|gb|ADF51480.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 731
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 210/384 (54%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++E +L +LK FGF FK LQ+ + I+ + +D FV MPTG G + +
Sbjct: 3 LTEIDLHKQLKKYFGFSQFKG-LQEDVVASIVHK-NDTFVIMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKT 149
I G + +SP+++ ++ + G S Y + ++ S KT
Sbjct: 57 LIEEGTAIV-----------VSPLIA-----LMKNQVDAIRGISSEYGVAHVLNSSLNKT 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E K + E++ + KLLYV PE E + L+ K++++ +DEAHC+SEWGH
Sbjct: 101 EVKQVKEDI--INGVTKLLYVAPESLTKEDYVDFLKE----QKISFLAIDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L ++ + G +IPIIALTATA P V++DI+ L K K FK S R NL+
Sbjct: 155 DFRPEYRNLRQIIKRIGENIPIIALTATATPKVQEDILKNLGIPKA-KTFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ GK GIIYC +R+ +LA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQNNGK------SGIIYCLSRKKVEELAQTLQVNGINAIP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ RS+ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRSKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C +++ + LE
Sbjct: 326 RAGRDGGEGHCLAFYAYKDIEKLE 349
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/403 (35%), Positives = 210/403 (52%), Gaps = 46/403 (11%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + + D FV MPTG G + + + PG +
Sbjct: 210 IFGNKTFR-PLQHQACKATVAK-QDCFVLMPTGG----GKSLCYQLPATLKPGVTVV--- 260
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL-YQLELIVSGQTKTENKAILEELRLV 161
ISP+LS + I+T + + S QT + AIL+ELR
Sbjct: 261 --------ISPLLSLI-------QDQIITLNLKFGIRATFLNSQQTSAQAAAILQELRKD 305
Query: 162 KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
KP KLLYVTPER A +F +L+ L +LA VVDEAHCVS+WGHDFRP Y+RLG
Sbjct: 306 KPSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPDYKRLGC 365
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
L+Q +P++ALTATA SV++DI+ L+ V +TS R NL Y+VI K+
Sbjct: 366 LKQ-NFPVVPVMALTATATHSVREDILKTLRIPGAL-VLETSFDRPNLKYEVIGK--TKE 421
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHER 329
S + + + +D N CGI+YC ++ +++ L K + +R
Sbjct: 422 SLKQLGDLL-----RDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQR 476
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ + GE++++ ATI+FGMGID+ +VRFV+H + SI +YYQESGRAGRD +
Sbjct: 477 VDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPAT 536
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C + + + ++++ KRE + M YCE
Sbjct: 537 CIALYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCE 579
>gi|345866766|ref|ZP_08818787.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
gi|344048686|gb|EGV44289.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
Length = 733
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 209/384 (54%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
V+E++L + LK FGF +FK LQ+ ++ IL D FV MPTG G + +
Sbjct: 3 VNEKDLHSALKTYFGFSAFKG-LQEPVVKSIL-SGKDTFVIMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKT 149
+ G + +SP+++ ++ + G SD + ++ S KT
Sbjct: 57 LMQEGTAIV-----------VSPLIA-----LMKNQVDAIRGISDHDGVAHVLNSSLNKT 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + + E++ KLLYV PE E L+ + K++++ VDEAHC+SEWGH
Sbjct: 101 EIRQVKEDI--TSGITKLLYVAPESLTKEENVEFLRSV----KISFMAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + + G++IPII LTATA P V++DI+ L N K FK S R NL+
Sbjct: 155 DFRPEYRNLKSIIERIGDNIPIIGLTATATPKVQEDILKNLNINDA-KTFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
Y+V K A + F++K GK GI+YC +R+ +LA L+ + V
Sbjct: 214 YEV--RPKTKHVDADIIRFVKKYEGK------SGIVYCLSRKRVEELAQTLQVNGIKAVP 265
Query: 326 KH------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H R+R Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKSRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + YC +++ + LE
Sbjct: 326 RAGRDGGEGYCLAFYAYKDIEKLE 349
>gi|305664748|ref|YP_003861035.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
gi|88707870|gb|EAR00109.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
Length = 736
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 209/389 (53%), Gaps = 48/389 (12%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVS 85
+ G ++E +L A LK FGF FK LQ++ +++I+ + + FV MPTG G +
Sbjct: 3 KHGMGLNEIDLHASLKKYFGFSQFKG-LQEEVVKNIV-QGKNTFVIMPTGG----GKSLC 56
Query: 86 ARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-S 144
+ + G I +SP+++ ++ + G S Y + ++ S
Sbjct: 57 YQLPALMQNGTAII-----------VSPLIA-----LMKNQVDAIRGISSEYGIAHVLNS 100
Query: 145 GQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
KTE K + E++ KLLYV PE E + L + ++++ VDEAHC+
Sbjct: 101 SLNKTEVKQVKEDI--TNGITKLLYVAPESLTKEVYIEFL----KSAGISFVAVDEAHCI 154
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
SEWGHDFRP YR L + G+SIPII LTATA P V++DII L KVFK S
Sbjct: 155 SEWGHDFRPEYRNLRTIVARLGDSIPIIGLTATATPKVQEDIIKNLGITDA-KVFKASFN 213
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR--- 321
R+NLFY+V DS + F+++ GK GI+YC +R+ +LA L+
Sbjct: 214 RANLFYEVRTKTANVDS--DIIRFVKQNSGK------SGIVYCLSRKRVEELAQVLQVNG 265
Query: 322 -------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ RS+ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +Y
Sbjct: 266 VSAVPYHAGFDAKTRSKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESY 325
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
YQE+GRAGRDG + +C ++S + LE
Sbjct: 326 YQETGRAGRDGGEGHCLAFYSYKDIEKLE 354
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 211/406 (51%), Gaps = 55/406 (13%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
+ L+ FG+ F LQ+ IR +L D+FV MPTG +S P
Sbjct: 61 SALQKYFGYSKFY-PLQEDIIRWVL-EQKDLFVLMPTGG---------GKSLCYQLPA-- 107
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILE 156
+ +G I+ ++S +D + G S + + + + + +LE
Sbjct: 108 LLFDG--------ITVVISPLIALMKDQVDGLTENGISATFINSSVHAREVAARKRDLLE 159
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
+IK+LY+ PER F LQ L K++ +DE+HC+SEWGHDFRP YR
Sbjct: 160 ------GKIKILYIAPERLAMREFLQFLQEL----KVSLFAIDESHCISEWGHDFRPEYR 209
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+L LR+ + P +ALTATA PSV++DI++ LK YKVF S R NLFY +I D
Sbjct: 210 QLKMLREKFPKT-PFMALTATATPSVQKDIVTQLKLTD-YKVFNASFNRKNLFYQIIPKD 267
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE---- 328
+ Y + C+ K+ K + GIIYC+ R+ LA +L+ R + H
Sbjct: 268 ---NPYHQIL-----CVLKERKKES-GIIYCQGRKTVESLAGSLQGEGYRALPYHAGLSA 318
Query: 329 --RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R+ QE F+R +I +I ATI+FGMGID+ NVR+V+H+ +P SI YYQE+GRAGRDGL
Sbjct: 319 EMRTENQERFIREDIEIIVATIAFGMGIDKPNVRYVIHYDLPKSIEGYYQETGRAGRDGL 378
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+S C + S K +EY I +Q ++ +++ YCE
Sbjct: 379 KSDCILLFSYADKIKIEYFIHQKEDENEKQ--AAYQQLKALVSYCE 422
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 210/409 (51%), Gaps = 58/409 (14%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + + D FV MPTG G + + + PG +
Sbjct: 181 IFGNKTFR-PLQHQACKATVAK-QDCFVLMPTGG----GKSLCYQLPATLKPGVTVV--- 231
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
ISP+LS + L+F T + S QT + AIL
Sbjct: 232 --------ISPLLSLIQDQIITLNLKFGIPAT-------------FLNSQQTSAQAAAIL 270
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR KP KLLYVTPER A +F +L+ L +LA VVDEAHCVS+WGHDFRP
Sbjct: 271 QELRHDKPSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFRPD 330
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y+RLG L+Q +P++ALTATA SV++DI+ L+ V +TS R NL Y+VI
Sbjct: 331 YKRLGCLKQ-NFPVVPVMALTATATHSVREDILKTLRIPGAL-VLETSFDRPNLKYEVIG 388
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
K+S + + + +D N CGI+YC ++ +++ L K
Sbjct: 389 K--TKESLKQLGDLL-----RDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAG 441
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R VQ + GE++++ ATI+FGMGID+ +VRFV+H + SI +YYQESGRAGR
Sbjct: 442 LGARQRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGR 501
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
D + C + + + ++++ KRE + M YCE
Sbjct: 502 DSHPATCIALYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCE 550
>gi|402492603|ref|ZP_10839363.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 728
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 215/396 (54%), Gaps = 72/396 (18%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSA 86
+++ EL LK FGF F+ LQ++ I+ LL+ D FV MPTG SL + +++S
Sbjct: 1 MNQSELQKALKKYFGFSQFRG-LQEQVIKS-LLKKEDTFVIMPTGGGKSLCYQLPALMSE 58
Query: 87 RSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + + P + N ++ S NG I+ +L+S +KT + T ++D
Sbjct: 59 GTAIVVSPLIALMKNQVDAIRSISSENG-IAHVLNSSL-----NKTDVATVKAD------ 106
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
I +G TK LLYV PE V E + L ++++ VDEA
Sbjct: 107 ISNGITK------------------LLYVAPESLVKEEYAEFLAS----QTISFLAVDEA 144
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
HC+SEWGHDFRP YR L + Q G++IPII LTATA P V++DI+ L + FK
Sbjct: 145 HCISEWGHDFRPEYRNLRRIIQSIGDNIPIIGLTATATPKVQEDILKNLGISGA-NTFKA 203
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVK----EFIEKCLGKDNKANNCGIIYCRTREHTTDLA 317
S R NLFY+V + A+V+ F+++ GK GIIYC +R+ +LA
Sbjct: 204 SFNRPNLFYEV------RPKTANVETDIIRFVKQNTGK------SGIIYCLSRKRVEELA 251
Query: 318 DALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGM 367
AL+ ++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFVVH+ +
Sbjct: 252 QALQVNGINAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVVHYDI 311
Query: 368 PSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
P SI +YYQE+GRAGRDG + +C Y++ + LE
Sbjct: 312 PKSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLE 347
>gi|325284946|ref|YP_004260736.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
gi|324320400|gb|ADY27865.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
Length = 733
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 209/383 (54%), Gaps = 48/383 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S +L A LK FGF FK LQ+ I + LL+ ++ FV MPTG G + +
Sbjct: 4 SNIDLHASLKKHFGFTKFKG-LQESVINN-LLKGNNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTE 150
+ G + +SP+++ ++ + G S + + ++ S TKT+
Sbjct: 58 MQEGTAIV-----------VSPLIA-----LMKNQVDAIRGISSEHGIAHVLNSSLTKTQ 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K + E++ V KLLYV PE + E + L R K++++ VDEAHC+SEWGHD
Sbjct: 102 VKEVKEDI--VNGVTKLLYVAPESLIKEEYVEFL----RSVKISFVAVDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR L + G++IP+I LTATA P V++DI+ L K+FK S R NLFY
Sbjct: 156 FRPEYRNLKTIVGKLGDNIPMIGLTATATPKVQEDIVKNLGIADA-KLFKASFNRPNLFY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR--------- 321
+V ++ A + F+++ +GK GI+YC +R+ +LA L+
Sbjct: 215 EV--RPKTQNIEADIIRFVKQNVGK------SGIVYCLSRKKVEELAQVLQVNGISAVPY 266
Query: 322 -RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ RSR Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GR
Sbjct: 267 HAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 327 AGRDGGEGHCLAFYSYKDIEKLE 349
>gi|254425231|ref|ZP_05038949.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
gi|196192720|gb|EDX87684.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
Length = 738
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 209/394 (53%), Gaps = 45/394 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E L + LK FG D F+ E +++I +L+ D+ V MPTG G + + +
Sbjct: 5 EPALESALKHFFGHDQFRFE--QRSIVEQVLKNKDVLVIMPTGG----GKSLCYQLPALL 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + ISP+++ + +V + + + + S + E +
Sbjct: 59 RPGTTIV-----------ISPLIALM-------QDQVVALKDNGIEATFLNSTLSFEEVR 100
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ ++L + K IK+LY+ PER T SFH L+ L + ++ +DEAHCVSEWGHDFR
Sbjct: 101 SRQKDLLMGK--IKILYIAPERLFTSSFHDFLKQLSQKVGISTFAIDEAHCVSEWGHDFR 158
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR+L +++Q IPIIALTATA V+ DI+ L+ N P V+ +S R NL+Y+V
Sbjct: 159 PEYRQLFQIKQLYPQ-IPIIALTATATQRVRTDIVQQLRLNDP-TVYISSFNRQNLYYEV 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
I + S ++ + K K GIIYC +R+H ++++ L +
Sbjct: 217 I-----QKSRKPYQQLLAKIQQHQGKEKGAGIIYCLSRKHVDEVSNNLTKDGISALPYHA 271
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ +R Q F+R ++ +I AT++FGMGI++ +VRFV+H+ +P ++ +YYQESGRAG
Sbjct: 272 GLTNTQRENNQTKFIRDDVQIIVATVAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAG 331
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
RD + C I ++ Y+I K D +R
Sbjct: 332 RDSEAASCTILFGWGDVHTVRYLIGQKADPGEQR 365
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 219/415 (52%), Gaps = 51/415 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL ++ FG +F+ Q + I LL HD FV MPTG G + + I
Sbjct: 440 RELFTVFRSTFGLHNFRPN-QLETINAALL-GHDCFVLMPTGG----GKSLCYQLPAVIS 493
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVS---GQTKTE 150
G + ISP+ K+ ++ L L++ + G K E
Sbjct: 494 KGVTLV-----------ISPL-----------KSLVIDQTEKLKSLDIPTAHLLGNMKPE 531
Query: 151 NKAIL-EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I+ +L + +P +K+LYVTPE+ A + +L +L KLA +V+DEAHCVS WG
Sbjct: 532 EENIIFTKLCMSEPGLKMLYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWG 591
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y+RLGE R+ + +PI+ALTATA V++D++ L+ + K+F +S R NL
Sbjct: 592 HDFRPDYKRLGEFRKKYPD-VPIMALTATATTRVREDVLHQLQISGT-KLFLSSFNRPNL 649
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y V+ K + A + I K+ N GI+YC +R+ + A + +
Sbjct: 650 LYKVV-PKKGKSAMAEIANLI-----KEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAI 703
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R+ VQ ++ ++N++ ATI+FGMGID+ +VR+V H+ +P SI YYQES
Sbjct: 704 SYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQES 763
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDG S+C +Y+S + +I+ D S E ++ +N ++ YCE
Sbjct: 764 GRAGRDGKTSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVHMQNLFRIVSYCEN 818
>gi|384247288|gb|EIE20775.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 455
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 202/367 (55%), Gaps = 37/367 (10%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ E Q++ I +L + D FV MPTG G + + I G +
Sbjct: 11 VFGNSAFR-EQQRRVIETVL-KDRDAFVLMPTGG----GKSLCYQLPAVISRGLTVV--- 61
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
ISP+LS +D ++VT S + S QT+ E +A+ EL+ +
Sbjct: 62 --------ISPLLS----LMQDQVRALVTTASGGVPATYLNSQQTEREKRAVFSELQKEQ 109
Query: 163 PRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLY+TPE+ V + + L+ L R LA VVDEAHCVS+WGHDFRP Y+++GE+
Sbjct: 110 PTVKLLYITPEQLVASAALASTLESLQRRGLLARFVVDEAHCVSQWGHDFRPDYKKIGEV 169
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
+ + IPI+ALTATA VK D++S+L + VF S FRSNL V+ +
Sbjct: 170 KASKFSRIPILALTATATDKVKTDVLSILGMSS-CPVFTVSFFRSNLVLSVVKKPTGRTP 228
Query: 282 YAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRR--KVNKH---------E 328
E +E + K N GIIY +R++T +A L+ +++ H +
Sbjct: 229 EGKPAE-LEALVNYIKAQGKNASGIIYVISRDNTATVAAYLKEEGEISAHSYHAGMTPKQ 287
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R +VQ + GE+ V+ ATI+FGMGID+ +VRFVVH+ + SI YYQE+GRAGRDG S
Sbjct: 288 RVKVQNDWRSGELQVVVATIAFGMGIDKPDVRFVVHYSLSKSIEGYYQEAGRAGRDGKHS 347
Query: 389 YCRIYHS 395
C + ++
Sbjct: 348 ECVLLYA 354
>gi|379729697|ref|YP_005321893.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
gi|378575308|gb|AFC24309.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
Length = 737
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 203/399 (50%), Gaps = 51/399 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSA 86
V ++ LT LK FGF+ FK Q++ I +L D FV MPTG SL + +++S
Sbjct: 3 VKDRSLTTALKKYFGFEQFKG--QQEEIIQSILSGQDTFVIMPTGGGKSLCYQLPALLSE 60
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ + + P + N V + + + +L + + + D IVSG
Sbjct: 61 GTAIVVSPLIALMKN-QVDAVRSYAESDQVAHFLNSSLSRAKVKEVKQD------IVSGA 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLY+ PE E L + K++++ VDEAHC+SE
Sbjct: 114 TK------------------LLYIAPETLTKEDTLRFLSQI----KVSFVAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + + IPIIALTATA P V+ DI+ L+ +P + F S R
Sbjct: 152 WGHDFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMDIVKTLRLEEP-REFMDSFNRD 210
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL------ 320
NLFY+V +D + +FI KD N GIIY + R+ T ++A L
Sbjct: 211 NLFYEVQPKGKKEDVLRRIVQFI-----KDKAPNESGIIYVQNRKTTEEVAKVLSVNDIK 265
Query: 321 ----RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ RS Q++F+ +++VI ATI+FGMGID+ +VRFV+H+ +P SI YYQ
Sbjct: 266 AAPYHAGLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQ 325
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG ++C ++S LE ++ +RE
Sbjct: 326 ETGRAGRDGQHAHCLTFYSYKDILRLEKFLRDKPVAERE 364
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 213/413 (51%), Gaps = 66/413 (15%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG S + LQ +A + L + D F+ MPTG G + + + PG +
Sbjct: 196 IFGNKSLR-PLQHQACKAALAK-QDSFILMPTGG----GKSLCYQLPATLQPGVTVV--- 246
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+SP+LS + L+F T + S Q ++ A+L
Sbjct: 247 --------VSPLLSLIQDQIITLNLKFGIPAT-------------FLNSQQNASQAAAVL 285
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR KP KLLYVTPER A +SF +L+ + + +LA VVDEAHCVS+WGHDFRP
Sbjct: 286 QELRKDKPSCKLLYVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFRPD 345
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI 273
YR LG L+Q +P++ALTATA V++DI++ L+ P+ + +F R NL Y+VI
Sbjct: 346 YRGLGSLKQ-NFPRVPVMALTATATHPVREDILNALRI--PHAIVLERSFDRPNLKYEVI 402
Query: 274 FDDLLKDSYAHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLADALRRKVN----- 325
KE +++ LG+ D + CGI+YC ++ D++ L K
Sbjct: 403 ---------VKTKEPLKQ-LGQLLMDRFKSQCGIVYCLSKSECVDVSKFLNEKCKIKAAY 452
Query: 326 ------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+R VQ+ + GE++++ ATI+FGMGID+ +VRFV+H M SI +YYQESG
Sbjct: 453 YHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESG 512
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRD L + C + + + +I+ K+E + M +YCE
Sbjct: 513 RAGRDNLPAVCIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKKMQQYCE 565
>gi|373957711|ref|ZP_09617671.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373894311|gb|EHQ30208.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 731
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 214/395 (54%), Gaps = 49/395 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+++ L L+ FGFD+FK E ++AI +L +D FV MPTG G + +
Sbjct: 4 TKKSLFDNLQNFFGFDNFKGE--QEAIITNILSGNDTFVIMPTGG----GKSMCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G + ISP+++ ++ + D+ G + + S TK+E
Sbjct: 58 MTDGMAIV-----------ISPLIA--LMKNQVDQLRAFGGSDSIAHF--LNSSLTKSEI 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ E++ + + KLLYV PE E+ +L R N ++++ VDEAHC+SEWGHD
Sbjct: 103 TKVKEDV--LSGKTKLLYVAPESLTKQENIDFL-----RLNSVSFVAVDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR++ ++ G +IPIIALTATA P V+QDI L+ N ++K+S R NLFY
Sbjct: 156 FRPEYRKIRQVISNIGENIPIIALTATATPKVQQDIQKNLQMNNA-TIYKSSFNRGNLFY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---------- 320
+V ++ + F+++ GK GIIYC +R+ ++A+AL
Sbjct: 215 EV---RAKRNVLKEIVRFVKQHTGK------SGIIYCLSRKKVEEVAEALSLNGVKALPY 265
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R+ Q+ F+ +++VI ATI+FGMGID+ +VR+V+H +P S+ YYQE+GR
Sbjct: 266 HAGLDAKVRADTQDRFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGR 325
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
AGRDG + C ++SE L+ +K +RE
Sbjct: 326 AGRDGGEGVCLAFYSEKDIDKLQKFMKDKPVAERE 360
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/415 (33%), Positives = 219/415 (52%), Gaps = 51/415 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL ++ FG +F+ Q + I LL HD FV MPTG G + + I
Sbjct: 440 RELFTVFRSTFGLHNFRPN-QLETINAALL-GHDCFVLMPTGG----GKSLCYQLPAVIS 493
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVS---GQTKTE 150
G + ISP+ K+ ++ L L++ + G K E
Sbjct: 494 KGVTLV-----------ISPL-----------KSLVIDQTEKLKSLDIPTAHLLGNMKPE 531
Query: 151 NKAIL-EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I+ +L + +P +K+LYVTPE+ A + +L +L KLA +V+DEAHCVS WG
Sbjct: 532 EENIIFTKLCMSEPGLKMLYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWG 591
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y+RLGE R+ + +PI+ALTATA V++D++ L+ + K+F +S R NL
Sbjct: 592 HDFRPDYKRLGEFRKKYPD-VPIMALTATATTRVREDVLHQLQISGT-KLFLSSFNRPNL 649
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y V+ K + A + I K+ N GI+YC +R+ + A + +
Sbjct: 650 LYKVV-PKKGKSAMAEIANLI-----KEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAI 703
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R+ VQ ++ ++N++ ATI+FGMGID+ +VR+V H+ +P SI YYQES
Sbjct: 704 SYHAGLSDPKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQES 763
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDG S+C +Y+S + +I+ D S E ++ +N ++ YCE
Sbjct: 764 GRAGRDGKTSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVHMQNLFRIVSYCEN 818
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 212/411 (51%), Gaps = 50/411 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ + Q +AI + L D+FV MPTG + + A +
Sbjct: 698 LRHVFKLKGFR-KNQLEAI-NATLEGQDVFVLMPTGGGKSLTYQLPA-----------LV 744
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
G + ISP+LS + + R Q LI S ++ E I++ L
Sbjct: 745 PTGKTQGVTIVISPLLSLM-------QDQVEHLRKLGVQATLINSETSREERDLIMDALW 797
Query: 160 LVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
+P ++LLYVTPE +E + L R KLA IV+DEAHCVS+WGHDFRP Y+
Sbjct: 798 DREPERMVQLLYVTPEMLGKSEKMLRTFEGLHRKRKLARIVIDEAHCVSQWGHDFRPDYK 857
Query: 217 RLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
LGE+RQ F G +P++ALTATA VK D I L + VF +S R+NL Y V+
Sbjct: 858 NLGEVRQRFPG--VPVMALTATATEIVKSDTIHNLSMDG-CAVFTSSFNRTNLSYSVLPK 914
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE------- 328
K + E I+K KD GIIYC +R++ D+A AL VN+H
Sbjct: 915 PKGKQDVQSMAEVIKKDHAKD-----TGIIYCLSRKNCEDIAAAL---VNEHRIKAKHYH 966
Query: 329 -------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ VQ+ + G ++VI ATI+FGMGID+ NVRFV+H +P S+ YYQE+GRA
Sbjct: 967 AGMDSIAKADVQKEWQAGHVHVIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYYQETGRA 1026
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRDG S C +Y+ L +I D +Q + + + M++YCE
Sbjct: 1027 GRDGKPSACYLYYGYGDAGKLRKMID-DGEGNWDQKDRQHQMLSKMVQYCE 1076
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 220/427 (51%), Gaps = 63/427 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL A K +FG SF+ ++ + + + +D+FV MPTG G ++ + I
Sbjct: 503 KELEANNKKVFGNHSFR--PNQREVINATMSGYDVFVLMPTGG----GKSLTYQLPALIC 556
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ + + +E +
Sbjct: 557 PGVTLV-----------ISPLVS----LIQDQIMHLIQAN---ISAAYLSANMEWSEQQE 598
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHD 210
I +L + KLLYVTPE+ LL+HL N LA IV+DEAHCVS+WGHD
Sbjct: 599 IFRDLSSDCSKYKLLYVTPEKVAKSDV--LLRHLESLNARHLLARIVIDEAHCVSQWGHD 656
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q IP++ALTATA SVK+D++ L +F+ S R NL+Y
Sbjct: 657 FRPDYQGLGILKQ-KFPKIPVLALTATATASVKEDVVQALGLINCI-IFRQSFNRPNLWY 714
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
VI K + +FI K+N + CGI+YC +R +A+ L+
Sbjct: 715 SVI--PKTKKCVDDIDKFI-----KENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFY 767
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +RS +Q+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 768 HGSMDPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 827
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVI---------------KTDTSTKREQLELKFKNYL 425
AGRDGL+S C +Y+S ++++I +T+ + LE +N L
Sbjct: 828 AGRDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLL 887
Query: 426 SMLEYCE 432
M+ YCE
Sbjct: 888 RMVSYCE 894
>gi|325103763|ref|YP_004273417.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
gi|324972611|gb|ADY51595.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
Length = 728
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 209/398 (52%), Gaps = 57/398 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
++ L L+ FGFD+FK + ++AI +L D FV MPTG G + + +
Sbjct: 4 KKSLIDNLQTFFGFDNFKGD--QEAIITSILNKEDTFVIMPTGG----GKSICYQLPALM 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ G + + S TKTE
Sbjct: 58 SEGTALV-----------ISPLIA--LMKNQVDQLRAFGGYDSIAHF--LNSSLTKTETN 102
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E++ + + KLLYV PE + + L+ + ++++ VDEAHC+SEWGHDFR
Sbjct: 103 RVKEDV--ISGKTKLLYVAPESLIKQENIDFLKSVT----VSFVAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ ++ IPIIALTATA P V+ DI L VFK+S R NLFY+V
Sbjct: 157 PEYRKIRQVVNNIREDIPIIALTATATPKVQTDIQKNLGMMNA-NVFKSSFNRGNLFYEV 215
Query: 273 -----IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RK 323
+F D++K ++K N GI+YC +R+ ++A+AL R
Sbjct: 216 RPKGNVFKDIIK----YIK----------NNPGKSGIVYCLSRKKVEEVANALEINGIRS 261
Query: 324 VNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ H R+ Q+ F+ E++VI ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 262 LPYHAGLDAKVRADTQDKFLMEEVDVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQE 321
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+GRAGRDG + YC ++SE L +K ++RE
Sbjct: 322 TGRAGRDGGEGYCIAFYSEKDVDKLAKFMKDKPVSERE 359
>gi|431796165|ref|YP_007223069.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786930|gb|AGA77059.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 708
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 135/403 (33%), Positives = 213/403 (52%), Gaps = 51/403 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+DSF+ Q++AI +L+ D V MPTG G V + + G +
Sbjct: 8 LKNFYGYDSFRG--QQEAIIQSILKQQDTIVLMPTGG----GKSVCYQIPAMVNDGLTLV 61
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ D+ + G + S Q+ +E + + EE+R
Sbjct: 62 -----------ISPLIA-----LMKDQVDALNGMG--IPAAYLNSSQSASEQRFVSEEIR 103
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++KLLYV PER +F L ++ ++L+ + +DEAHCVS+WGHDFRP Y +G
Sbjct: 104 --SGKLKLLYVAPERLFGGAFP--LTETLKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIG 159
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LRQ + +P +ALTATA+ + DI L KP K F +S R N+ Y ++ +
Sbjct: 160 RLRQELPD-VPFVALTATADKQTRADIADKLGLRKP-KWFISSFDRPNITYRIVPK---R 214
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+S+ + +F+E N GIIYC +R++ D+A L+ +++ R
Sbjct: 215 NSFEKLLDFLE------YHQKNSGIIYCLSRKNVEDMAGRLQAAGLSALPYHAGLDRQTR 268
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE F++ ++ ++ ATI+FGMGID+ NVRFVVH MP +I YYQE+GRAGRDGL S
Sbjct: 269 ASHQEKFIKDKVKIMVATIAFGMGIDKSNVRFVVHMNMPQNIEGYYQETGRAGRDGLPSD 328
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S +L+ +I DT + E+ M ++C+
Sbjct: 329 ALLFYSYADVMTLQRMI--DTPDNPDYSEVMLAKLEKMKQFCQ 369
>gi|424842508|ref|ZP_18267133.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
gi|395320706|gb|EJF53627.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
Length = 737
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 202/399 (50%), Gaps = 51/399 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSA 86
V ++ LT LK FGF+ FK Q++ I +L D FV MPTG SL + +++S
Sbjct: 3 VKDRSLTTALKKYFGFEQFKG--QQEEIIQSILGGQDTFVIMPTGGGKSLCYQLPALLSE 60
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ + + P + N V + + + +L + + + D IVSG
Sbjct: 61 GTAIVVSPLIALMKN-QVDAVRSYAESDQVAHFLNSSLSRAKVKEVKQD------IVSGA 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLY+ PE E L + K++++ VDEAHC+SE
Sbjct: 114 TK------------------LLYIAPETLTKEDTLRFLSQI----KVSFVAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + + IPIIALTATA P V+ DI+ L+ P + F S R
Sbjct: 152 WGHDFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMDIVKTLRLEAP-REFMDSFNRD 210
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL------ 320
NLFY+V +D + +FI KD N GIIY + R+ T ++A L
Sbjct: 211 NLFYEVQPKGKKEDVLRRIVQFI-----KDKAPNESGIIYVQNRKTTEEVAKVLSVNDIK 265
Query: 321 ----RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ RS Q++F+ +++VI ATI+FGMGID+ +VRFV+H+ +P SI YYQ
Sbjct: 266 AAPYHAGLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQ 325
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG ++C ++S LE ++ +RE
Sbjct: 326 ETGRAGRDGQHAHCLTFYSYKDILRLEKFLRDKPVAERE 364
>gi|170593171|ref|XP_001901338.1| Bloom's syndrome protein homolog [Brugia malayi]
gi|158591405|gb|EDP30018.1| Bloom's syndrome protein homolog, putative [Brugia malayi]
Length = 1054
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 151/416 (36%), Positives = 217/416 (52%), Gaps = 53/416 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
E+ LK+ FGF+ F+ QK AI LL +D F+ MPTGA G + + +
Sbjct: 283 NEMYHILKSRFGFNQFR-HRQKHAIIAALL-GYDCFILMPTGA----GKSLCYQLPAILS 336
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP+ K+ I + + +LE+ T N+A
Sbjct: 337 KGITVV-----------ISPL-----------KSLIEDQKMKMKELEICCYALTSELNQA 374
Query: 154 ----ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
I L P+IKLLYVTPE+ A +E + + L R + L VVDEAHCVS+WG
Sbjct: 375 ESDRIYSMLNESSPKIKLLYVTPEKIAASEKLNNMFFSLHRRDLLTRFVVDEAHCVSQWG 434
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y +L LR+ FT +P++ALTATA P + DI L + K+F +S R+N
Sbjct: 435 HDFRPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDIRVHLAIQQS-KLFISSFVRTN 493
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L YDVI S V + + K L D GI+YC +R ++ L
Sbjct: 494 LKYDVIAKG--PRSLVRVMDRM-KILYPDKS----GIVYCLSRRDCELVSKMLENHAISS 546
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +R VQ ++ ++NVI ATI+FGMGID+ +VRFV+H+ MP SI AYYQE
Sbjct: 547 EVYHAGLSDKKRLEVQTKWISNQVNVICATIAFGMGIDKPDVRFVIHFSMPKSIEAYYQE 606
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
+GRAGRDGL SYC I +S + + +I+ + +T+ + + + L ++ YCE
Sbjct: 607 TGRAGRDGLNSYCAILYSYNDSVRIRKMIEGENNTQGVR-TMHLNSVLQIVAYCEN 661
>gi|340618927|ref|YP_004737380.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
gi|339733724|emb|CAZ97101.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
Length = 736
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 204/384 (53%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ E +L A LK FGF FK LQ+ I +IL R ++ F MPTG G + +
Sbjct: 8 LKETDLHASLKKHFGFSEFKG-LQQAVITNILER-NNTFAIMPTGG----GKSLCYQLPA 61
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKT 149
+ G + +SP+++ ++ + G SD + + ++ S TKT
Sbjct: 62 LMQDGTAIV-----------VSPLIA-----LMKNQVDAIRGVSDQFGIAHVLNSSLTKT 105
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + + E++ KLLYV PE E + LQ + KL++I VDEAHC+SEWGH
Sbjct: 106 EVRQVKEDI--TNGITKLLYVAPESLTKEDYIDFLQSV----KLSFIAVDEAHCISEWGH 159
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + + IPIIALTATA P V++DII L + +K S R NLF
Sbjct: 160 DFRPEYRNLRTIVNRLDDDIPIIALTATATPKVQEDIIKNLGITDA-QTYKASFNRPNLF 218
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V DS + F++K GK GIIYC +R+ +LA L+
Sbjct: 219 YEVRPKTANVDS--DIIRFVKKNAGK------SGIIYCLSRKRVEELAQVLQVNGVSAVP 270
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ RS+ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 271 YHAGFDAKTRSKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 330
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRD + +C ++S + LE
Sbjct: 331 RAGRDDGEGHCLAFYSYKDIEKLE 354
>gi|325954269|ref|YP_004237929.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
gi|323436887|gb|ADX67351.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
Length = 731
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 209/395 (52%), Gaps = 55/395 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L++ LK FG+D FK Q++ I LL D+FV MPTG G + + +
Sbjct: 7 KDLSSYLKKYFGYDQFKG--QQEEIIKTLLNNQDVFVLMPTGG----GKSMCYQLPALMS 60
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G I +SP+++ ++ + G S ++ S K+E K
Sbjct: 61 EGVAII-----------VSPLIA-----LMKNQVDALRGISTNEVAHVLNSSLNKSETKI 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+++++R K K+LYV PE E + + + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 VMDDIRAGK--TKMLYVAPESLTKEEYIDFFKTV----KISFFAIDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV- 272
YR L + Q GN+ PIIALTATA P V++DI L +VFK S R NLFY+V
Sbjct: 159 EYRNLKSIIQKIGNA-PIIALTATATPKVQEDIQKTLGMQDA-RVFKDSFNRPNLFYEVR 216
Query: 273 --IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
I D + +FI+K GK G++YC +R+ +L L+
Sbjct: 217 PKINQD------KEIVKFIKKRQGK------SGVVYCLSRKKVEELTQLLQVNGIKAIPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ RS+ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H+ +P S+ +YYQE+GR
Sbjct: 265 HAGLDAKTRSKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
AGRDG + C ++ + LE + + +RE
Sbjct: 325 AGRDGGEGECVAFYDYKDIEKLEKFLASKPVAERE 359
>gi|298251484|ref|ZP_06975287.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
gi|297546076|gb|EFH79944.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
Length = 739
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 212/384 (55%), Gaps = 48/384 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L LK FG+++F Q++ I L D F MPTGA SL+ +
Sbjct: 2 QDLEQHLKHYFGYEAF-LPGQREVIEQAL-SGRDAFALMPTGAGKSLIYQL--------- 50
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ +LNG +S I+S +D + T L +S +++
Sbjct: 51 ---SGLLLNG--------VSIIISPLIALMQDQVDRLKTNGIPATFLNSALSASERSQR- 98
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
E +++ ++KL+YV PER +T++F L + L I VDEAHCVSEWGHDFR
Sbjct: 99 ----EREILQGKLKLVYVAPERLLTQTFLTFLDEVQERVGLGLIAVDEAHCVSEWGHDFR 154
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR+LG LR +P +ALTATA V++DI++ LK N PY V S R NL+Y+V
Sbjct: 155 PEYRQLGRLR-VRYPQVPAMALTATATERVQEDILTQLKLNDPY-VEVASYNRPNLYYEV 212
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH- 327
+++Y+ + +F+ + +++ IIYC++R++ +AD+L+ R + H
Sbjct: 213 --RQKHQNTYSELVQFLRE------QSDAPVIIYCQSRKNVDTIADSLQHHGIRALPYHA 264
Query: 328 -----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
ER+R Q+SF+ ++ V+ ATI+FGMGI + +VR V+H+ MP S+ YYQESGRAG
Sbjct: 265 GLSTDERTRNQDSFIHDDVPVLVATIAFGMGIAKPDVRAVIHYDMPKSLEGYYQESGRAG 324
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI 406
RDGL++ C +++ + E+++
Sbjct: 325 RDGLEARCILFYQHGDRMKYEFIL 348
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 200/383 (52%), Gaps = 62/383 (16%)
Query: 63 LRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLR 121
L D+FV MPTG SL + + R + G F+ +SP+LS
Sbjct: 177 LNGDDVFVLMPTGGGKSLCYQLPAIIQRYKTQ-GVTFV-----------VSPLLS----L 220
Query: 122 FRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPE-RAVTESF 180
+D +V GR ++ S T + K I L P ++LLY+TPE + ++
Sbjct: 221 MQDQVEQLVKGRG--IAAGMLNSSVTAEQKKWIYNNLYQDTPTLQLLYITPELMSKSDQL 278
Query: 181 HYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEP 240
++ L R NKLA V+DEAHCVS+WGHDFRP Y++LG LR N +PI+ALTATA
Sbjct: 279 RNVMDSLHRRNKLARFVIDEAHCVSQWGHDFRPDYKQLGSLRNIYPN-VPIMALTATAND 337
Query: 241 SVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN 300
+V++D+I LK ++ A + EFI++
Sbjct: 338 AVQKDVIHNLKRKGK-----------------------RNHLADINEFIKQ------HYT 368
Query: 301 NCGIIYCRTREHTTDLADALRR-----------KVNKHERSRVQESFMRGEINVITATIS 349
GIIYC +R+ +A+ALR K+ ERS VQ + G+I VI ATI+
Sbjct: 369 ESGIIYCISRKDCEQVAEALRTTYGVSTKHYHGKMTSSERSEVQSEWQTGKIRVIVATIA 428
Query: 350 FGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD 409
FGMGID+ +VR+VVH+ MPSS+ YYQE+GRAGRDGL + CR+Y+S ++ ++I
Sbjct: 429 FGMGIDKPDVRYVVHFSMPSSLEGYYQETGRAGRDGLPAICRLYYSFSDMRTHNFLIDQG 488
Query: 410 TSTKREQLELKFKNYLSMLEYCE 432
+ +Q + + N +M+ YC+
Sbjct: 489 EGS-WQQKQRQRDNLNTMMRYCD 510
>gi|326428091|gb|EGD73661.1| hypothetical protein PTSG_12303 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 199/392 (50%), Gaps = 58/392 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+ A +K++FGFDSF+ Q+KA++ ++ G SL + + + PG
Sbjct: 35 VKASMKSVFGFDSFRGLHQEKAVKCLVQ----------GGGKSLCYQLPAI-----VLPG 79
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
F+ +SP+++ D+ + GR + + S K + AIL
Sbjct: 80 VSFV-----------VSPLIALI-----QDQVDTLQGRG--IKCAALNSSIPKQQQGAIL 121
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L P +KL+Y+TPE + L+ L N L VDEAHCVS+WGHDFRP +
Sbjct: 122 SDLESAAPTLKLVYITPESLLHPEMQRRLRRLDHLNLLGIFAVDEAHCVSQWGHDFRPAF 181
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
RLG+L+ QF IP++A TATA+ V +D+IS+L +P V + + R NLFY
Sbjct: 182 TRLGDLKAQFP--HIPLLAATATAKRDVVRDVISILHMTQP-TVIRGTVDRPNLFYQGTH 238
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKAN-----NCGIIYCRTREHTTDLADAL--------- 320
+ E + L ++ CGI+Y RE LA AL
Sbjct: 239 ------AMEAWLELMPPRLSSRHRCCPVGPLPCGIVYVHKREDCDSLAGALAGCKLRTAA 292
Query: 321 -RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
V+ +R+ +Q+ + I +I ATI+FGMGID+ +VRFVVHW M S+ AYYQE+G
Sbjct: 293 YHAGVSPKQRADLQQQWTDNRIQIIVATIAFGMGIDKPDVRFVVHWNMSKSMEAYYQEAG 352
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS 411
RAGRDG QSYCR+Y S K E+ K + +
Sbjct: 353 RAGRDGKQSYCRLYFSLEDKSLHEFFFKKEVA 384
>gi|443316688|ref|ZP_21046123.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
gi|442783715|gb|ELR93620.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
Length = 720
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 218/429 (50%), Gaps = 60/429 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FG+D F+ LQ++A +L D V MPTG + + A R+ G
Sbjct: 12 LEAALKHFFGYDQFR--LQQRAAIEAVLNQQDALVVMPTGGGKSLCYQLPALLRL----G 65
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ + + + L+L+ +A
Sbjct: 66 VTIV-----------VSPLIALMQDQVEALNNNGIAATFLNSSLDLM---------EARS 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E L++ R KLLYV PER ++E+F L L + LA +DEAHCVSEWGHDFRP Y
Sbjct: 106 REYDLLQGRTKLLYVAPERLLSENFWPFLTRLQQQVGLAGFAIDEAHCVSEWGHDFRPEY 165
Query: 216 RRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
R+L LR F G IP++ALTATA V+QDI+ L+ KP +V S R NL+Y+V
Sbjct: 166 RQLHRLRSAFAG--IPMLALTATATERVRQDIVQQLQLQKP-EVLVASFNRPNLYYEVRP 222
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
D + +Y H+ + ++ N GIIYC +R+ ++A L+ +
Sbjct: 223 KD--RQTYGHLLQQVQSI-------NGAGIIYCLSRKRVDEIALRLQNDGIAALPYHAGL 273
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R+ Q F+R ++ V+ ATI+FGMGI++ +VRFVVH+ +P ++ +YYQESGRAGRD
Sbjct: 274 PDLTRAENQRRFIRDDVRVMVATIAFGMGINKPDVRFVVHYDLPRTLESYYQESGRAGRD 333
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------GY 435
G ++C +Y ++ Y+I +REQ + + +++Y E GY
Sbjct: 334 GEPAHCTVYFGYADVSTVNYLIDQKPD-EREQ-NIARQQLRQVIDYAESTVCRRQIQLGY 391
Query: 436 FLVILVFPC 444
F L C
Sbjct: 392 FGEFLSESC 400
>gi|256419821|ref|YP_003120474.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
gi|256034729|gb|ACU58273.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
Length = 733
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 213/392 (54%), Gaps = 48/392 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L L+ FGFDSFK Q+ I+ I L D FV MPTG G + + + G
Sbjct: 8 LIDALREHFGFDSFKGN-QEIIIKSI-LAGKDTFVIMPTGG----GKSLCYQLPALMSSG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I +SP+++ ++ +V S + ++ T +KA +
Sbjct: 62 CALI-----------VSPLIA-----LMKNQVDLVRSYSSKDNVAHFLNS---TLSKAQI 102
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+++R L+ + K+LYV PE + + L ++++I VDEAHC+SEWGHDFRP
Sbjct: 103 KKVRTDLLSGKTKMLYVAPETLTKQENLDFFREL----EISFIAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRRL E+ + +S+PIIALTATA P V+ DI+ L+ P +VF +S RSNL+Y++
Sbjct: 159 EYRRLKEMIEQINDSLPIIALTATATPKVQSDIVKNLELRDP-QVFLSSFNRSNLYYEIR 217
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRK 323
+ + +FI + GK GIIY R+ T +LAD L
Sbjct: 218 PKRKKDQTIREIVKFIHQHKGK------SGIIYTLNRKTTEELADMLVANNIKAVAYHAG 271
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGR
Sbjct: 272 LDAGTRAQRQDMFLHEDVDVIVATIAFGMGIDKPDVRFVIHYNIPKSLENYYQETGRAGR 331
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DGL+ C ++S + LE++++ ++RE
Sbjct: 332 DGLEGICVCFYSYKDVQKLEHLMRDKPLSERE 363
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ + ++ + L D+FV MPTG G + + + G +
Sbjct: 229 LREVFKMKEFR--MNQREVIQACLSGKDVFVLMPTGG----GKSICYQLPALVYEGITIV 282
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+LS + R+ D+ L I S ++TE + E L
Sbjct: 283 -----------VSPLLSLVQDQIRN------LLEKDILALP-INSNLSRTERSLVFEVLG 324
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ K+ YVTPE A + FH ++ LVR +L V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 325 SEELICKIFYVTPELIAKSGHFHDVVSGLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKEL 384
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--IFDD 276
G +R S+PIIALTATA V+ DI+ L + + FK S RSNL Y+V
Sbjct: 385 GSIRARY-PSVPIIALTATATKKVELDILENLGI-RGCETFKMSFNRSNLRYEVRAKTST 442
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------KVNKH 327
+ D + V+ C CGIIYC +++ ++D L++ ++K+
Sbjct: 443 VELDIVSFVQTHFPDC---------CGIIYCTSKKECEMISDRLKKYMKTAFYHAGLSKN 493
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER+ VQE + +GE VI ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGRDGL+
Sbjct: 494 ERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLE 553
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
S C ++++ KK + ++I+ EQ + + ++ +++++CE
Sbjct: 554 SVCVLFYTYGDKKKISFMIEKGDGG-YEQKQRQREDLEAVIQFCEN 598
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 156/451 (34%), Positives = 223/451 (49%), Gaps = 59/451 (13%)
Query: 4 GESKDASSAVGKSSSLTGN-QQDRKGGKVS------EQELTAKLKALFGFDSFKCELQKK 56
E K A +S + TGN + D G+ +E+ + FG SF+ Q +
Sbjct: 590 NEQKKAFKPNIESGNFTGNYKNDGVSGEFDGLSYTHSREMLKIFRQKFGLYSFRPN-QLQ 648
Query: 57 AIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILS 116
AI +L D FV MPTG G + + + PG + ISP+
Sbjct: 649 AINAAML-GFDCFVLMPTGG----GKSLCYQLPALLLPGVTIV-----------ISPL-- 690
Query: 117 SFYLRFRDDKTSIVTGRSDLYQLELI---VSGQ-TKTENKAILEELRLVKPRIKLLYVTP 172
K+ I+ L L++ +SG T + AI EL P +KLLYVTP
Sbjct: 691 ---------KSLILDQVQKLTSLDIPAAHLSGTITDAQADAIYRELSKKDPALKLLYVTP 741
Query: 173 ER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPI 231
E+ + ++ F LL L LA V+DEAHCVS+WGHDFRP Y+RL LR+ + +
Sbjct: 742 EKISASQKFCNLLSSLYERGLLAKFVIDEAHCVSQWGHDFRPDYKRLKMLRE-NYTKVGM 800
Query: 232 IALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEK 291
IALTATA P V+ DI+ L +P K F +S R NL Y +I K E I
Sbjct: 801 IALTATATPRVRTDILHQLGLTRP-KWFMSSFNRPNLRYSII----TKKGKNCSDEVI-- 853
Query: 292 CLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSRVQESFMRGEI 341
+ K N+CGI+YC +R+ D A +R+ + + RS +Q ++ EI
Sbjct: 854 AMIKTKYKNDCGIVYCLSRKECDDYAVQMRKNGIKALGYHAGLTDNNRSNIQGRWISEEI 913
Query: 342 NVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKS 401
V+ ATI+FGMGID+ NVRFV+H +P SI YYQESGRAGRDG + C ++++
Sbjct: 914 KVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENADCILFYNYADMHR 973
Query: 402 LEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ +I+ D S + ++ N M+ +CE
Sbjct: 974 IRKMIEMDNSNP-DAIKTNIDNLFKMVSFCE 1003
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 229/437 (52%), Gaps = 55/437 (12%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
VG+ SS+ G+ R ++ + ++ F F+ Q +AI + L D FV M
Sbjct: 678 VGQISSVEGHPWSR--------DVKSAMRETFKLRGFRPN-QLEAI-NSTLSGKDTFVLM 727
Query: 73 PTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT 131
PTG SL + S I G + ISP+LS + V
Sbjct: 728 PTGGGKSLCYQLPS------------IIRTGKTKGVTIVISPLLSLMQDQ--------VA 767
Query: 132 GRSDLYQLELIVSGQ-TKTENKAILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHL 187
L +++G +K E I+ LR ++ I+LLYVTPE A + + +L L
Sbjct: 768 HLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQL 827
Query: 188 VRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDI 246
+KLA IV+DEAHCVS+WGHDFRP Y LG +R+ ++G +P++ALTATA P+V+ D+
Sbjct: 828 HSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSG--VPVMALTATATPNVQVDV 885
Query: 247 ISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIY 306
I L+ K +VF S R NL Y+V +D+ + + I ++ + CGIIY
Sbjct: 886 IHNLRM-KGCEVFTQSFNRPNLTYEVRKKGRAQDALKDIADLI-----TNDYPDKCGIIY 939
Query: 307 CRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGID 355
C +R+ +A L K ++ +R VQ + G+ NVI ATI+FGMGID
Sbjct: 940 CLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGID 999
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ + S+ Y+IK + T E
Sbjct: 1000 KADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTHE 1059
Query: 416 QLELKFKNYLSMLEYCE 432
Q + + + + ++CE
Sbjct: 1060 QKQRQRQMLRHVTQFCE 1076
>gi|386820490|ref|ZP_10107706.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386425596|gb|EIJ39426.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 733
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 208/382 (54%), Gaps = 46/382 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E +L A LK FGF FK LQ+K I++I+ + FV MPTG G + +
Sbjct: 4 AEIDLQAALKQYFGFSQFKG-LQEKVIKNII-NDQNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G + ISP+++ ++ + D ++ + + + S KTE
Sbjct: 58 VKDGTAIV-----------ISPLIA--LMKNQVDAIRGISSNKGIAHV--LNSSLNKTEV 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ + E++ KLLYV PE E + R K++++ VDEAHC+SEWGHDF
Sbjct: 103 RQVKEDI--TNGVTKLLYVAPESLTKEEY----VEFFRTVKISFVAVDEAHCISEWGHDF 156
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR + + Q G+ IPIIALTATA P V++DI+ L N +V+K S R NL+Y+
Sbjct: 157 RPEYRNIRTIIQRLGDDIPIIALTATATPKVQEDILKNLGVNSA-EVYKASFNRPNLYYE 215
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH 327
V K+ A + F+++ GK GIIYC +R+ +LA L+ + V H
Sbjct: 216 V--RPKTKNVDADIIRFVKQNEGK------SGIIYCLSRKRVEELAQTLQVNGLKAVPYH 267
Query: 328 E------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
R+R Q+ F+ + +++ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRA
Sbjct: 268 AGLDAKTRARHQDMFLMEDTDIVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRA 327
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + +C ++S + LE
Sbjct: 328 GRDGGEGHCLAFYSYKDIEKLE 349
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 210/413 (50%), Gaps = 52/413 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
L K FG +F+ +Q + I LL +D FV MPTG + +V++ +
Sbjct: 641 LQVAFKETFGLRTFR-PIQLQVINATLL-GNDCFVLMPTGGGKSLCYQLPAVLTVGLTIV 698
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ P IL+ V+ N P ++G +++ ++
Sbjct: 699 VSPLKSLILD-QVQKLNSLDIP-------------AGHLSGEANMADVQ----------- 733
Query: 152 KAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
I ++L P +KLLYVTPE+ + + F LL L R + L IV+DEAHCVS WGHD
Sbjct: 734 -RIYDDLYSSCPELKLLYVTPEKISSSAKFQNLLSALYRRSLLGRIVIDEAHCVSAWGHD 792
Query: 211 FRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
FRP Y++L LR QF ++PIIALTATA P V+ DI++ LK + + F S R NL
Sbjct: 793 FRPDYKKLSALREQFP--TVPIIALTATANPRVRMDILAQLKLARDTRWFLCSFNRPNLK 850
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE- 328
Y V+ + + A + E I K +D GI+YC +++ LAD RR K +
Sbjct: 851 YLVLPKKGVS-TKAEMIELIRKRFPRDT-----GIVYCLSKKECDQLADEFRRAGIKAKS 904
Query: 329 ---------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
R Q+ ++ I V+ ATI+FGMGID+ +VR+V+H+ MP SI YYQESG
Sbjct: 905 YHAGLSDGVREATQKEWIGDRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESG 964
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG + C +Y++ ++ DTS E ++ N M+ YCE
Sbjct: 965 RAGRDGEIATCVLYYNYSDMLRYRKMMDNDTSISLEAKQIHMNNLFRMVNYCE 1017
>gi|375149593|ref|YP_005012034.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
gi|361063639|gb|AEW02631.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
Length = 763
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 209/411 (50%), Gaps = 44/411 (10%)
Query: 15 KSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPT 74
K +++ + +S L L+ FGFD FK ++AI LL D FV PT
Sbjct: 17 KDTTVAKKKASNSSTTISSASLHQALQEQFGFDHFKG--NQEAIIKTLLAGKDTFVIKPT 74
Query: 75 GAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS 134
G G + + + G I ISP+++ ++ + D + +
Sbjct: 75 GG----GKSLCYQLPAIMSEGVAII-----------ISPLIA--LMKNQVDLVRSYSSKD 117
Query: 135 DLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLA 194
D+ + S TK E + + ++ L+ R K+LYV PE + L KL+
Sbjct: 118 DVAH--FLNSTLTKKEIREVHDD--LLSGRTKMLYVAPETLTKQENLEFFSDL----KLS 169
Query: 195 YIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNK 254
+ VDEAHC+SEWGHDFRP YRRL E+ IP+IALTATA P V+ DII L
Sbjct: 170 FFAVDEAHCISEWGHDFRPEYRRLREMMTQINPDIPVIALTATATPKVQSDIIKNLALKD 229
Query: 255 PYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTT 314
P +++ +S R NL+Y++ + ++ FI GK GIIY R+ T
Sbjct: 230 P-EIYISSFNRPNLYYEIQPKIKKDQTIKNIVRFIVSMKGK------SGIIYTLNRKTTE 282
Query: 315 DLADALR----RKVNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+LAD L + V H R+ Q+ F+ ++ VI ATI+FGMGID+ ++RFV+H
Sbjct: 283 ELADMLMANGIKAVAYHAGLDSKLRAERQDLFLNEDVQVIVATIAFGMGIDKPDIRFVIH 342
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ +P SI YYQE+GRAGRDGL+ C +Y+S LE++++ ++RE
Sbjct: 343 FNIPKSIENYYQETGRAGRDGLEGKCILYYSHKDVSKLEHLMRDKPLSERE 393
>gi|336171234|ref|YP_004578372.1| RecQ family ATP-dependent DNA helicase [Lacinutrix sp. 5H-3-7-4]
gi|334725806|gb|AEG99943.1| ATP-dependent DNA helicase, RecQ family [Lacinutrix sp. 5H-3-7-4]
Length = 730
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 205/380 (53%), Gaps = 48/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ A LK FGF FK LQ+K I IL + + FV MPTG G + + +
Sbjct: 4 EIQAALKKHFGFSEFKG-LQEKVIESILDKK-NTFVIMPTGG----GKSLCYQLPALMQE 57
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + +SP+++ ++ + G SD + + ++ S KTE K
Sbjct: 58 GTAIV-----------VSPLIA-----LMKNQVDAIRGVSDEHGIAHVLNSSLNKTEVKQ 101
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ E++ KLLYV PE E L R K++++ VDEAHC+SEWGHDFRP
Sbjct: 102 VKEDI--TNGITKLLYVAPESLTKEENVEFL----RGVKISFMAVDEAHCISEWGHDFRP 155
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR L + Q G++IPII LTATA P V++DI+ L+ K FK S R NL+Y+V
Sbjct: 156 EYRNLRTIIQRIGDNIPIIGLTATATPKVQEDILKNLRMTDA-KTFKASFNRPNLYYEVR 214
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE- 328
DS + F+++ GK GI+YC +R+ +LA L+ + V H
Sbjct: 215 PKTKTVDS--DIIRFVKQNSGK------TGIVYCLSRKRVEELAQVLQVNGIKAVPYHAG 266
Query: 329 -----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
R++ Q+ F+ +I+V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAGR
Sbjct: 267 LDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGR 326
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + +C Y+S + LE
Sbjct: 327 DGGEGHCLAYYSYKDIEKLE 346
>gi|242066738|ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
gi|241934489|gb|EES07634.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
Length = 714
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 194/391 (49%), Gaps = 62/391 (15%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K + +EL + L FG+ F+ + Q +AI +L D F MPTG + V A
Sbjct: 15 KKAPKELESVLNQYFGYSGFRGK-QLEAIEAVL-SGRDCFCLMPTGGGKSMCYQVPA--- 69
Query: 90 VRIPPGADFILNGNVRS-RNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
L V S +N I E + S Q
Sbjct: 70 ----------LENQVASLKNKGIP--------------------------AEFLSSTQAS 93
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I E+L P +KLLYVTPE T F L+ L L + +DEAHC+S WG
Sbjct: 94 HTKQRIHEDLDTGNPSLKLLYVTPELVATSGFMAKLKKLYNRGLLGLVAIDEAHCISTWG 153
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP+YR+L LR QF IP++ALTATA P V++D+IS L P + + S R N
Sbjct: 154 HDFRPSYRKLSSLRKQFP--DIPLLALTATAVPKVQKDVISSLCLQNPV-ILRASFNRPN 210
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
+FY+V + DLL D Y+ + ++ + N C IIYC R DL+ L ++
Sbjct: 211 IFYEVRYKDLLDDVYSDISNLLK------SSGNACSIIYCLERAACDDLSMHLSQQGVSS 264
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+N RS V + ++ V+ AT++FGMGIDRQ+VR V H+ +P S+ ++YQE
Sbjct: 265 AAYHAGLNSKVRSSVLDDWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQE 324
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT 408
SGRAGRD S +Y+ ++ +E++++
Sbjct: 325 SGRAGRDQRPSRSVLYYGLDDRRRMEFILRN 355
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 209/416 (50%), Gaps = 45/416 (10%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
G +EL LK+ FGF+ F+ QK+ I L+ HD FV MPTGA G + +
Sbjct: 228 GADMNKELYDTLKSKFGFNQFR-HRQKQCILSTLM-GHDTFVLMPTGA----GKSLCYQL 281
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
I PG + +SP+ S D K + + E + +
Sbjct: 282 PAVILPGVTVV-----------VSPLRS----LIEDQKMKM---KELGIGCEALTADLGA 323
Query: 149 TENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
+ I EL P IKLLYVTPE+ + + + + L R LA V+DEAHCVS+W
Sbjct: 324 PAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFDLHRRGLLARFVIDEAHCVSQW 383
Query: 208 GHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y +L LR+ + +PIIALTATA P + D LK K+F +S R
Sbjct: 384 GHDFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTDARDHLKMQN-SKLFISSFVRD 442
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL---------- 316
NL YD L+ + + +EK K GI+YC +R+ +
Sbjct: 443 NLKYD-----LIPKAARSLINVVEKM--KQLYPGKSGIVYCLSRKECETVQMMLTKAGLS 495
Query: 317 ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
A+ +N + R VQ S++ + +VI ATI+FGMGID+ +VRFV+H+ +P SI YYQ
Sbjct: 496 AEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 555
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG+ SYC + +S H L +I+ +T + + N L ++ YCE
Sbjct: 556 ETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVR-SMHLNNVLQVVAYCE 610
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ +G VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQGGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|389613321|dbj|BAM20019.1| homolog of RecQ, partial [Papilio xuthus]
Length = 291
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 168/292 (57%), Gaps = 26/292 (8%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+T KL FG FK ELQ++A+R I HD++VSMPTG+ G
Sbjct: 4 VTEKLLECFGHRKFKSELQERAVRAIARGVHDVYVSMPTGS------------------G 45
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
++ ++ + S +D + + Q E I S + + + ++
Sbjct: 46 KSLCFQLPAMLQDNKVAIVFSPLLALIKDQIDHLTKFK---IQAESINSKMSTKDRERVI 102
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+LR ++P + LYVTPE+A T +F L++HLV+Y K++Y+VVDEAHCVSEWGHDFRP Y
Sbjct: 103 NDLRSMRPNTRFLYVTPEQAATGTFKSLMEHLVKYKKVSYVVVDEAHCVSEWGHDFRPDY 162
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG+LR+ SIP +ALTATA V +DI+S LK +P +KT +FR NL+YDVI+
Sbjct: 163 LKLGDLRELY-RSIPWVALTATASAEVAKDILSNLKLLQPVAQYKTPSFRKNLYYDVIYQ 221
Query: 276 DLLKDSYAHVKEFIEKCLGKDN----KANNCGIIYCRTREHTTDLADALRRK 323
+ ++D + EF++K L +D K + I+YCRTRE T +LA L ++
Sbjct: 222 NCIEDEIGDLCEFLKKSLKEDENVKPKDKSAVIVYCRTREQTEELAHMLNKR 273
>gi|299743122|ref|XP_001835556.2| hypothetical protein CC1G_03338 [Coprinopsis cinerea okayama7#130]
gi|298405510|gb|EAU86127.2| hypothetical protein CC1G_03338 [Coprinopsis cinerea okayama7#130]
Length = 787
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 207/394 (52%), Gaps = 41/394 (10%)
Query: 17 SSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA 76
SS + + + G V E+ L A LK FG+ S+K ++K I + D+ V PTG
Sbjct: 2 SSEASSSKLKDQGSVEERCLNA-LKRTFGYSSYKG--KQKEIVEAAVSGQDVLVVAPTGM 58
Query: 77 VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL 136
+ + A + PG + +SP+L+ K + T R
Sbjct: 59 GKSLCFQIPA---IADKPGVSLV-----------VSPLLALM-------KNQVETLRGRG 97
Query: 137 YQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYI 196
S +K E + I E+L P+++LLYVTPE+ T+ F L+ HL +L +
Sbjct: 98 VPTASFSSETSKEERQEITEDLESDTPQLRLLYVTPEKLSTQEFLRLMDHLHDVGQLNRL 157
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VVDEAHC+SEWGHDFR YRR+G R + +PI+ALTATA P V+ DII LK +
Sbjct: 158 VVDEAHCISEWGHDFRAEYRRIGSFRNRYPD-VPIMALTATATPDVQSDIIHNLKLSSDN 216
Query: 257 KVFKTSTF-RSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHT 313
F R+NL+Y+V + D K + ++I+ + K +CGIIYCRT+
Sbjct: 217 LFRALHPFNRANLYYEVRYLSDRNPKTRMEDIHKYIKTLYTRRGKV-SCGIIYCRTKAAC 275
Query: 314 TDLADALRRK-VNKHE------RSRVQESFMR-----GEINVITATISFGMGIDRQNVRF 361
+L LR+ +N +++ + R GEI+V+ ATI+FGMGID+ +VR+
Sbjct: 276 EELTQFLRKNGINAGSYYRGIPPTKLDATLRRWLDGSGEIDVVVATIAFGMGIDKGDVRY 335
Query: 362 VVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHS 395
++H+ +P S +YQE+GRAGRDGL + C +Y S
Sbjct: 336 IIHFDLPKSFEGFYQETGRAGRDGLPAKCVLYFS 369
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 215/404 (53%), Gaps = 55/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG++ F+ LQK+ I IL D F MPTG G + + + G +
Sbjct: 5 LQKYFGYNDFR-PLQKEIISDIL-EGKDTFALMPTGG----GKSLCYQLPALMMDGVTVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +S+ E + S ++ K + E +
Sbjct: 59 -----------ISPLISLM-------KDQVDNLKSNGIAAEYLNSTLGYSQIKQVHE--K 98
Query: 160 LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
L+ RIK+LYV PER + +++F YL + K++ VDEAHC+SEWGHDFRP YRRL
Sbjct: 99 LIDNRIKILYVAPERLIMSDTFSYL-----KKGKVSMFAVDEAHCISEWGHDFRPEYRRL 153
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L++ N +PI+ALTATA P V++DI+ L + + ++ S R NLFY V
Sbjct: 154 NILKKRFRN-VPIVALTATASPKVEKDIVKQLSL-EDCRTYRASFNRKNLFYHV---KTK 208
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD+Y +K +++K G+ GIIYC++R L+ L + ++ +
Sbjct: 209 KDTYRQLKAYLKKHRGES------GIIYCQSRSMVETLSKRLNKDGFKTLAYHAGLSDFK 262
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q SF++ ++I AT++FGMGID+ +VRFV+H+ +P ++ +YYQE+GR GRDGL
Sbjct: 263 REYNQNSFIQDNTDIIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQETGRGGRDGLPC 322
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C ++ S K +EY I+ + +E+ + M+ YCE
Sbjct: 323 ECVLFFSYADKYKIEYFIEQKKT--KEERDAALMQLRQMINYCE 364
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 214/410 (52%), Gaps = 45/410 (10%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L + LK +FG SF+ LQ +AI + L D+F+ MPTG + + A V G
Sbjct: 9 LRSTLKDVFGIPSFR-TLQLEAI-NATLSGRDVFIIMPTGGGKSLCYQLPAIIDVGSSGG 66
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+LS +D S++ D+ + + S Q K I
Sbjct: 67 VTIV-----------ISPLLS----LIQDQVMSLIN--LDIPAV-FLTSEQDSETTKDIY 108
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
EL P +LLYVTPE+ + +E+F +L+ L +VVDEAHCVS WGHDFRP
Sbjct: 109 RELGSRNPSFRLLYVTPEKISRSETFLNILRRLHERGLFKRVVVDEAHCVSNWGHDFRPD 168
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR+LG + +F +P+IALTATA V++DII LK K K S R+NL+Y+V
Sbjct: 169 YRKLGIFKDEFP--DVPLIALTATATGIVQEDIIHQLKI-KNCVSLKGSFNRTNLYYEVR 225
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRK 323
L+ + + EFI K N GIIYC +++ +A+ L
Sbjct: 226 KKQTLEKTAKEISEFINK-----KYPNQSGIIYCLSKKDCEKMAEELTTLGHDVGVYNSD 280
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ ++ V E + R E+ +I ATI+FGMGI++ +VRFV+H +P SI YYQESGRAGR
Sbjct: 281 IKAADKQEVHEKWSRDELKIIVATIAFGMGINKPDVRFVIHHSLPKSIEDYYQESGRAGR 340
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
DGL S+C +++S K + ++ + + K ++N ++ YCE
Sbjct: 341 DGLPSHCILFYSYADKARQQKFLENENTNKS-----GYENINKIVSYCEN 385
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 202/387 (52%), Gaps = 45/387 (11%)
Query: 63 LRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLR 121
L D FV MPTG SL + S I G + ISP+LS +
Sbjct: 714 LSGRDTFVLMPTGGGKSLCYQLPS------------IIKTGQTKGVTIVISPLLSLMQDQ 761
Query: 122 FRDDKTSIVTGRSDLYQLELIVSGQ-TKTENKAILEELRLVKP--RIKLLYVTPER-AVT 177
V L+ +++G +K E +I+ LR ++ I+LLYVTPE A +
Sbjct: 762 --------VAHLQKLHVKAFLINGDVSKDERTSIMSNLRSLRADSHIQLLYVTPEMLAKS 813
Query: 178 ESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTA 236
+ L L KLA IV+DEAHCVS+WGHDFRP Y LG++R+ +TG +P++ALTA
Sbjct: 814 RAMESALLQLHSNKKLARIVIDEAHCVSQWGHDFRPDYTALGKMRERYTG--VPVMALTA 871
Query: 237 TAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKD 296
TA P+V+ D+I L K VF S R NL Y+V +D+ + + I
Sbjct: 872 TATPNVQVDVIHNLHM-KGCDVFTQSFNRPNLTYEVRKKGRAQDALKDIADLITT----- 925
Query: 297 NKANNCGIIYCRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVIT 345
+ + CGIIYC +R+ +A L K ++ ER VQ + G VI
Sbjct: 926 DYSGKCGIIYCLSRKTCERVAMQLSSKFGVKTAHYHAGLSSKERFAVQRDWQSGRHTVIV 985
Query: 346 ATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYV 405
ATI+FGMGID+ NVRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ H S+ Y+
Sbjct: 986 ATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYHDSVSINYM 1045
Query: 406 IKTDTSTKREQLELKFKNYLSMLEYCE 432
I + T +EQ + + + ++CE
Sbjct: 1046 INKNKDTTQEQKHRQRQMLRHVTQFCE 1072
>gi|428184941|gb|EKX53795.1| hypothetical protein GUITHDRAFT_52059, partial [Guillardia theta
CCMP2712]
Length = 340
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 198/371 (53%), Gaps = 47/371 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG F+ LQK+AI H +L D+ V + TG G + + + PG +
Sbjct: 1 LKQAFGLSDFR-PLQKEAI-HNVLGGKDVIVCLATGG----GKSLCYQLPALVLPGVTVV 54
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ + + + R L+ S + TE + IL L
Sbjct: 55 -----------ISPLIALM-------QDQVFSLREKGIDAVLLNSTLSPTETRNILHRLW 96
Query: 160 LVK-PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+K IKLLYVTPE + L L NKL+ +DEAHC+S WGHDFRP +R+L
Sbjct: 97 AIKHSPIKLLYVTPEALSGSTLFPYLNRLNEQNKLSLFAIDEAHCISSWGHDFRPAFRKL 156
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
L++F + +P+IALTATA V+ DI S L N P F +TF R N+ Y+V F +
Sbjct: 157 SILKRFY-SKVPVIALTATATKRVRDDIASTLMLNNPE--FLIATFNRPNITYEVRFKEQ 213
Query: 278 LKDS--YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ DS + F+ K G+ CGIIYC R +++A L+ K +
Sbjct: 214 VPDSDVQGDIARFLSKMKGQ------CGIIYCFKRTECSEIAMYLKGKGFSIEAYHAGLK 267
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS + +++ G+I+++ AT++FGMGID+ +VRFV+H MP S+ ++YQESGRAGRDG
Sbjct: 268 NDERSEILQNWTEGKIHIVAATVAFGMGIDKADVRFVIHQTMPKSMESFYQESGRAGRDG 327
Query: 386 LQSYCRIYHSE 396
S +Y+SE
Sbjct: 328 KPSVSVLYYSE 338
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 218/403 (54%), Gaps = 55/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ LQK I+ +L D FV MPTG + + A +
Sbjct: 5 LQKYFGYSEFR-PLQKDIIQDVL-DGKDTFVLMPTGGGKSLCYQLPA-----------LL 51
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++G ISP++S K + + R++ + S Q TE++ I +++
Sbjct: 52 MDG----LTVVISPLISLM-------KDQVDSLRANGVNAAFLNSTQNYTESRKICDDI- 99
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
IK+LY+ PER A++ + ++ K++ +DE+HC+SEWGHDFRP YR+L
Sbjct: 100 -ATNDIKILYMAPERLAMSGTLS-----MITKAKVSLFAIDESHCISEWGHDFRPEYRKL 153
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L++ +PIIALTATA P V++D ++ L P K + S RSNL Y++
Sbjct: 154 SMLKK-KFPKVPIIALTATATPKVREDTLNQLGLTNP-KTYIASFNRSNLLYEIRPK--- 208
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K++Y + +++ + GK GIIYC++R++ + LR+ ++ +
Sbjct: 209 KETYDQILQYLRRNKGKG------GIIYCQSRKNVDTVTAKLRKAGFNALPYHAGLSDTQ 262
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R R QE+F++ + ++I ATI+FGMGID+ NVRFV+H+ +P ++ YYQE+GR GRDGL+
Sbjct: 263 RGRNQEAFIKDKADIIVATIAFGMGIDKPNVRFVIHYDLPKNLEGYYQETGRGGRDGLEC 322
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
C ++ S + +EY +K ++E+ ++ K M+ YC
Sbjct: 323 ECILFFSHGDRYRIEYFVK--QKGRKEERDIALKQLQDMVNYC 363
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 211/405 (52%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 676 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 725
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 726 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 767
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 768 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRM 827
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 828 NILRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 885
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +A+ L+ ++
Sbjct: 886 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1044
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 204/384 (53%), Gaps = 47/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ E L KLK FGFD+FK E Q+ I H LL +DIFV MPTG G + +
Sbjct: 2 IKEVNLIEKLKHFFGFDNFKGE-QESIILH-LLAGNDIFVLMPTGG----GKSLCYQLPS 55
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKT 149
I G + +SP+++ ++ +V G S+ + + S K
Sbjct: 56 LIMEGTAIV-----------VSPLIA-----LMKNQVDVVNGISETDGVAHFLNSSLKKA 99
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E ++ ++R+ K KLLYV PE E L+ + K+++ +DEAHC+SEWGH
Sbjct: 100 EIDSVRNDIRVGKT--KLLYVAPESLNKEDNIAFLKTI----KVSFYAIDEAHCISEWGH 153
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR++ G + PIIALTATA V+ DI+ L + FK+S R NL+
Sbjct: 154 DFRPEYRKIRTAIDEIGKA-PIIALTATATDKVRTDIVRSLGIEGCLE-FKSSFNRPNLY 211
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL--------- 320
Y+V F D+ + FI++ GK GIIYC +R+ +LA L
Sbjct: 212 YEVRFKKNEDDTNKQIIRFIKQHSGK------SGIIYCLSRKKVEELAAILIANDIKAAA 265
Query: 321 -RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ RS+ Q+ F+ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+G
Sbjct: 266 YHAGLDSETRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + C ++S + K LE
Sbjct: 326 RAGRDGEEGICIAFYSRNDLKKLE 349
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 211/405 (52%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 676 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 725
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 726 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 767
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 768 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRM 827
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 828 NILRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 885
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +A+ L+ ++
Sbjct: 886 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1044
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 675 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 724
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 725 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 766
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 767 KKDPIIKLLYVTPEKVCASNRLISTLENLYERGLLARFVIDEAHCVSQWGHDFRPDYKRM 826
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 827 NILRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 884
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +A+ L+ ++
Sbjct: 885 KVAFDCL-EWIRKYHPHDS-----GIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 938
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 939 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 999 SHCILFYAYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1043
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 665 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 714
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 715 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 756
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 757 KKDPIIKLLYVTPEKVCASNRLLSTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 816
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 817 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILQP-QVFSMSFNRHNLKYYVLPKKPK 874
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L++ ++
Sbjct: 875 KVAFDCL-EWIRKYHPHDS-----GIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 928
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 929 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 988
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 989 SHCLLFYTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1033
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 211/405 (52%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 674 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 723
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 724 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 765
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 766 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 825
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 826 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILQP-QVFSMSFNRHNLKYYVLPKKPK 883
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 884 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 937
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 938 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 997
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 998 SHCLLFYTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1042
>gi|340351994|ref|ZP_08674884.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
gi|339615729|gb|EGQ20399.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
Length = 727
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 203/387 (52%), Gaps = 53/387 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSA 86
V+E LT KLK FGFD FK ++AI +L +D FV MPTG + S++
Sbjct: 2 VTEVNLTEKLKYFFGFDKFKG--AQEAIIQNVLAGNDTFVLMPTGGGKSLCYQLPSLIMD 59
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ + I P + N V NG + YL KT I ++D I++G+
Sbjct: 60 GTAIVISPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKTEIDHVKAD------ILNGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E + + K+++ +DEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLNKEESIEFFKTV----KVSFYAIDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YR++ + G + PIIALTATA V+ DI+ L + FK+S R
Sbjct: 151 WGHDFRPEYRKIRQAVDLIGKA-PIIALTATATDKVRTDIVKSLGIEDCAE-FKSSFNRP 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK 326
NL+Y+V +D+ + +FI++ GK GIIYC +R+ +LA L+ K
Sbjct: 209 NLYYEVRSKKNEEDTNRQIIKFIKQNPGK------SGIIYCLSRKKVEELAAVLQANDIK 262
Query: 327 HE----------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
E RSR Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQ
Sbjct: 263 AEPYHAGLDSETRSRTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLE 403
E+GRAGRDG + C +++S++ K LE
Sbjct: 323 ETGRAGRDGEEGQCIVFYSKNDLKKLE 349
>gi|406883341|gb|EKD30951.1| hypothetical protein ACD_77C00439G0002 [uncultured bacterium]
Length = 733
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 210/392 (53%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGFDSFK + Q++ I+H L+ +D FV MPTG G + + + PG
Sbjct: 8 LHTQLKEFFGFDSFKGQ-QEEVIKH-LIDGNDSFVLMPTGG----GKSLCYQLPALVMPG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I ISP+++ K + R + + E I + NKA +
Sbjct: 62 VAII-----------ISPLIALM-------KNQVDAIRGFVEEREGIAHFLNSSLNKAQI 103
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+E++ L+ + KLLYV PE E L+ L +++ VDEAHC+SEWGHDFRP
Sbjct: 104 QEVKEDLMSGQTKLLYVAPESLTKEENIAFLKQLT----ISFYAVDEAHCISEWGHDFRP 159
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + Q G + P+IALTATA P V+ DI L + VFKTS R NL+Y++
Sbjct: 160 EYRRIYPIVQEIGKA-PVIALTATATPKVQNDIQKNLGMSDAM-VFKTSFNRPNLYYEIR 217
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRK 323
++ + FI+ GK GIIYC +R+ D+A L
Sbjct: 218 HK---ANTEREIIRFIKANEGK------SGIIYCLSRKKVEDVAQLLVVNGIKALPYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ + R+ Q+SF+ ++VI ATI+FGMGID+ +VRFV+H+ +P S+ +YYQE+GR+GR
Sbjct: 269 LDAYTRASNQDSFLMEGVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRSGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C ++S + LE ++ +++E
Sbjct: 329 DGGEGQCIAFYSYKDIQKLEKFMQGKPISEQE 360
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 211/405 (52%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 676 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 725
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 726 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 767
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 768 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRM 827
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 828 NILRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 885
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +A+ L+ ++
Sbjct: 886 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCE 1044
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 213/406 (52%), Gaps = 52/406 (12%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + + D FV MPTG G + + + PG +
Sbjct: 197 IFGNRTFR-PLQHQACKASVTK-RDCFVLMPTGG----GKSLCYQLPATLQPGVTVV--- 247
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL-YQLELIVSGQTKTENKAILEELRLV 161
+ P+LS + I+T + + S QT ++ A+L+ELR
Sbjct: 248 --------VCPLLSLI-------QDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKD 292
Query: 162 KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
KP KLLYVTPER A +F +L+ L +LA VVDEAHCVS+WGHDFRP YR LG
Sbjct: 293 KPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGC 352
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK-VFKTSTFRSNLFYDVIFDDLLK 279
L+Q +P++ALTATA V++DI++ L+ P+ V +TS RSNL Y+VI
Sbjct: 353 LKQ-NFPDVPVMALTATATQPVRKDILNSLRI--PHALVLETSFDRSNLKYEVI------ 403
Query: 280 DSYAHVKEFIEKC--LGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNK 326
KE +++ L KD N CGI+YC ++ +++ L K ++
Sbjct: 404 ---GKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSA 460
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R VQ+ + G++++I ATI+FGMGI++ NVRFV+H M SI YYQESGRAGRD L
Sbjct: 461 RQRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDL 520
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C + + + +++ K E + M +YCE
Sbjct: 521 PAVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKMQQYCE 566
>gi|260591259|ref|ZP_05856717.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
gi|260537124|gb|EEX19741.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
Length = 727
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 202/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGF+ FK + Q+ IR+ LL HD FV MPTG + S++ +
Sbjct: 4 ELNLTEKLKHYFGFEKFKGD-QEAIIRN-LLAGHDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG+TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEIDKVRAD------IVSGRTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENMAFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ G + P+IALTATA V+ DII L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRYAIDTIG-AAPVIALTATATDKVRTDIIRSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRAKRSDDDTSKQIIKFIKQHTGK------SGIIYCLSRKKVEELAAILQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S++ K LE
Sbjct: 325 GRAGRDGKEGICIVFYSKNDLKKLE 349
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 229/437 (52%), Gaps = 55/437 (12%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
VG+ SS+ G+ + ++ + ++ F F+ Q +AI + L D FV M
Sbjct: 649 VGQISSVEGHPWSK--------DVKSAMRETFKLRGFRPN-QLEAI-NSTLSGKDTFVLM 698
Query: 73 PTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT 131
PTG SL + S I G + ISP+LS + V
Sbjct: 699 PTGGGKSLCYQLPS------------IIRTGKTKGVTIVISPLLSLMQDQ--------VA 738
Query: 132 GRSDLYQLELIVSGQ-TKTENKAILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHL 187
L +++G +K E I+ LR ++ I+LLYVTPE A + + +L L
Sbjct: 739 HLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQL 798
Query: 188 VRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDI 246
+KLA IV+DEAHCVS+WGHDFRP Y LG +R+ ++G +P++ALTATA P+V+ D+
Sbjct: 799 HSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSG--VPVMALTATATPNVQVDV 856
Query: 247 ISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIY 306
I L+ K +VF S R NL Y+V +D+ + + I ++ + CGIIY
Sbjct: 857 IHNLRM-KGCEVFTQSFNRPNLTYEVRKKGRAQDALKDIADLI-----TNDYPDKCGIIY 910
Query: 307 CRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGID 355
C +R+ +A L K ++ +R VQ + G+ NVI ATI+FGMGID
Sbjct: 911 CLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGID 970
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ + S+ Y+IK + T E
Sbjct: 971 KADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTHE 1030
Query: 416 QLELKFKNYLSMLEYCE 432
Q + + + + ++CE
Sbjct: 1031 QKQRQRQMLRHVTQFCE 1047
>gi|408674061|ref|YP_006873809.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387855685|gb|AFK03782.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 207/394 (52%), Gaps = 50/394 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+Q L KLK +FGFD+F+ E ++ I H ++ + FV MPTGA +S
Sbjct: 7 QQTLKEKLKEIFGFDAFRGE--QEPIIHNIVSGKNTFVIMPTGA---------GKSLCYQ 55
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L+G ISP+++ ++ + D+ S + L S T+ +N
Sbjct: 56 LPA--MVLDGTAI----VISPLIA--LMKNQVDQMSAFGINAQFLNSTLNKSEMTRVKND 107
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++ KLLY+ PE E L+ KL++I VDEAHC+SEWGHDFR
Sbjct: 108 -------VMSGDCKLLYIAPESLTKEDNLTFLKKA----KLSFIAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + ++PIIALTATA P V+QDI L + + +FK+S R NL+Y++
Sbjct: 157 PEYRRIRGIIDDIDPNLPIIALTATATPKVQQDIQKNLSMEQSH-IFKSSFNRKNLYYEI 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
DS + ++I GK GIIYC +R+ ++A L
Sbjct: 216 ---RPKIDSKKQLIKYIANNKGK------SGIIYCLSRKKVEEIAGLLNVNGIKALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R + Q++F+ E ++I ATI+FGMGID+ +VRFV+H+ P S+ YYQE+GRAG
Sbjct: 267 GLDADTRMKNQDAFLNEECDIIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
RDGL+ C ++++ LE K T T+R+
Sbjct: 327 RDGLEGNCLMFYAYDDILKLEKFNKDKTVTERDN 360
>gi|387132182|ref|YP_006298154.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
gi|386375030|gb|AFJ09244.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
Length = 727
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 202/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK Q+ IR++L +D FV MPTG + S++ +
Sbjct: 4 EVNLTEKLKHFFGFDKFKG-AQETIIRNVL-EGNDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N V NG + YL KT I ++D I SG+TK
Sbjct: 62 AIVISPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKTEIDNVKAD------IQSGKTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E + + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEDSIEFFKTV----KVSFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + PIIALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRQAVDQIGKA-PIIALTATATDKVRTDIVKSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE 328
+Y+V +D+ + +FI++ LGK GIIYC +R+ +LA L+ K E
Sbjct: 211 YYEVRPKKNEEDTNRQIIKFIKQNLGK------SGIIYCLSRKKVEELAAVLQANEIKAE 264
Query: 329 ----------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S++ K LE
Sbjct: 325 GRAGRDGEEGKCIVFYSKNDLKKLE 349
>gi|383810866|ref|ZP_09966350.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356505|gb|EID34005.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
Length = 727
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 202/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGF+ FK + Q+ IR+ LL HD FV MPTG + S++ +
Sbjct: 4 ELNLTEKLKYYFGFEKFKGD-QEAIIRN-LLAGHDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG+TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEIDKVRAD------IVSGRTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENMAFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ G + P+IALTATA V+ DII L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRYAIDTIG-AAPVIALTATATDKVRTDIIRSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRAKRSDDDTSKQIIKFIKQHTGK------SGIIYCLSRKKVEELAAILQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S++ K LE
Sbjct: 325 GRAGRDGEEGICIVFYSKNDLKKLE 349
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 228/437 (52%), Gaps = 55/437 (12%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
VG+ SS+ G+ + ++ + ++ F F+ Q +AI + L D FV M
Sbjct: 678 VGQISSVEGHPWSK--------DVKSAMRETFKLRGFRPN-QLEAI-NSTLSGKDTFVLM 727
Query: 73 PTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT 131
PTG SL + S I G + ISP+LS + V
Sbjct: 728 PTGGGKSLCYQLPS------------IIRTGKTKGVTIVISPLLSLMQDQ--------VA 767
Query: 132 GRSDLYQLELIVSGQ-TKTENKAILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHL 187
L +++G +K E I+ LR ++ I+LLYVTPE A + + +L L
Sbjct: 768 HLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQL 827
Query: 188 VRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDI 246
+KLA IV+DEAHCVS+WGHDFRP Y LG +R+ + G +P++ALTATA P+V+ D+
Sbjct: 828 HSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYPG--VPVMALTATATPNVQVDV 885
Query: 247 ISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIY 306
I L+ K +VF S R NL Y+V +D+ + + I ++ + CGIIY
Sbjct: 886 IHNLRM-KGCEVFTQSFNRPNLTYEVRKKGRAQDALKDIADLI-----TNDYPDKCGIIY 939
Query: 307 CRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGID 355
C +R+ +A L K ++ +R VQ + G+ NVI ATI+FGMGID
Sbjct: 940 CLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGID 999
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ NVRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ + S+ Y+IK + T E
Sbjct: 1000 KANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTYE 1059
Query: 416 QLELKFKNYLSMLEYCE 432
Q + + + + ++CE
Sbjct: 1060 QKQRQRQMLRHVTQFCE 1076
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 151/437 (34%), Positives = 228/437 (52%), Gaps = 55/437 (12%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
VG+ SS+ G+ + ++ + ++ F F+ Q +AI + L D FV M
Sbjct: 647 VGQISSVEGHPWSK--------DVKSAMRETFKLRGFRPN-QLEAI-NSTLSGKDTFVLM 696
Query: 73 PTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT 131
PTG SL + S I G + ISP+LS + V
Sbjct: 697 PTGGGKSLCYQLPS------------IIRTGKTKGVTIVISPLLSLMQDQ--------VA 736
Query: 132 GRSDLYQLELIVSGQ-TKTENKAILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHL 187
L +++G +K E I+ LR ++ I+LLYVTPE A + + +L L
Sbjct: 737 HLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQL 796
Query: 188 VRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDI 246
+KLA IV+DEAHCVS+WGHDFRP Y LG +R+ + G +P++ALTATA P+V+ D+
Sbjct: 797 HSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYPG--VPVMALTATATPNVQVDV 854
Query: 247 ISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIY 306
I L+ K +VF S R NL Y+V +D+ + + I ++ + CGIIY
Sbjct: 855 IHNLRM-KGCEVFTQSFNRPNLTYEVRKKGRAQDALKDIADLI-----TNDYPDKCGIIY 908
Query: 307 CRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGID 355
C +R+ +A L K ++ +R VQ + G+ NVI ATI+FGMGID
Sbjct: 909 CLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGID 968
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ NVRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ + S+ Y+IK + T E
Sbjct: 969 KANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTYE 1028
Query: 416 QLELKFKNYLSMLEYCE 432
Q + + + + ++CE
Sbjct: 1029 QKQRQRQMLRHVTQFCE 1045
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 222/406 (54%), Gaps = 48/406 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ ++ + L D+FV MPTG G + + + G +
Sbjct: 225 LREVFKMKEFR--TNQREVIQACLSGKDVFVLMPTGG----GKSICYQLPALVYEGVTIV 278
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+LS +D +++ + D+ L I S ++TE + + E L
Sbjct: 279 -----------VSPLLS----LVQDQILNLL--QKDILALP-INSNLSRTERRLVFEALG 320
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ K+ YVTPE A + FH ++ LVR +L V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 321 SDELICKIFYVTPELIAKSGHFHEVVSGLVRRGRLKRFVIDEAHCVSQWGHDFRPDYKEL 380
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--IFDD 276
G +R+ S+PIIALTATA V+ DI+ L + + FK S R+NL Y+V
Sbjct: 381 GSIRRRY-PSVPIIALTATATKKVELDILENLGI-RGCETFKMSFNRANLRYEVRAKTST 438
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------NKH 327
+ D + V+ C CGIIYC +++ +++ L++ + +K+
Sbjct: 439 VELDIVSFVQTHFPDC---------CGIIYCTSKKECEMISEKLKKHMKTAFYHAGLSKN 489
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER+ VQE + +GE VI ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGRDGL+
Sbjct: 490 ERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLE 549
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
S C ++++ KK + ++I+ EQ + + ++ +++++CE
Sbjct: 550 SVCVLFYTYGDKKKISFMIEKGDGG-YEQKQRQKEDLEAVIQFCEN 594
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 288 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 337
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 338 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 379
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 380 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 439
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 440 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 497
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 498 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 551
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 552 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 611
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 612 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 656
>gi|363580415|ref|ZP_09313225.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium HQM9]
Length = 728
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 214/392 (54%), Gaps = 64/392 (16%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSA 86
+++ EL LK FGF F+ LQ++ I+ LL+ D FV MPTG SL + +++S
Sbjct: 1 MNQSELQKALKKYFGFSQFRG-LQEQVIKS-LLKKEDTFVIMPTGGGKSLCYQLPALMSE 58
Query: 87 RSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + + P + N ++ S NG I+ +L+S +KT + + D
Sbjct: 59 GTAIVVSPLIALMKNQVDAIRSISSENG-IAHVLNSSL-----NKTDVANVKMD------ 106
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
I +G TK LLYV PE V E + L ++++ VDEA
Sbjct: 107 ISNGVTK------------------LLYVAPESLVKEEYAEFLAS----QTISFLAVDEA 144
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
HC+SEWGHDFRP YR L + + G++IPII LTATA P V++DI+ L + FK
Sbjct: 145 HCISEWGHDFRPEYRNLRRIIKGIGDNIPIIGLTATATPKVQEDILKNLGISGA-NTFKA 203
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR 321
S R NLFY+V + A+V+ I + + ++++ GIIYC +R+ +LA AL+
Sbjct: 204 SFNRPNLFYEV------RPKTANVETDIIRFVKQNSE--KSGIIYCLSRKKVEELAQALQ 255
Query: 322 ----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSI 371
++ R++ Q+ F+ +I+V+ ATI+FGMGID+ +VRFVVH+ +P SI
Sbjct: 256 VNGIIAVPYHAGLDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHYDIPKSI 315
Query: 372 PAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+YYQE+GRAGRDG + +C Y++ + LE
Sbjct: 316 ESYYQETGRAGRDGGEGHCLAYYAYKDIEKLE 347
>gi|30679600|ref|NP_187225.2| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
gi|75334309|sp|Q9FT74.1|RQL1_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName:
Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1
gi|10944747|emb|CAC14163.1| DNA Helicase [Arabidopsis thaliana]
gi|332640767|gb|AEE74288.1| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
Length = 606
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 206/409 (50%), Gaps = 58/409 (14%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG F+ LQ +A R + R D FV MPTG G + + + G +
Sbjct: 201 IFGNKVFR-PLQHQACRASMER-KDCFVLMPTGG----GKSLCYQLPATLKAGVTIV--- 251
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
ISP+LS + L+F T + S QT ++ A+L
Sbjct: 252 --------ISPLLSLIQDQIVALNLKFGIPAT-------------FLNSQQTSSQAAAVL 290
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR P KLLYVTPE+ A + SF L+ L R LA VVDEAHCVS+WGHDFRP
Sbjct: 291 QELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPD 350
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR LG L+Q +P++ALTATA SV QD++ L+ + V K S R NL Y+VI
Sbjct: 351 YRELGCLKQ-NFPRVPVMALTATATESVCQDVLKSLRIPRA-PVLKMSFDRINLKYEVIV 408
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
K+ ++E + +D + GI+YC ++ D+A L K
Sbjct: 409 K--TKEPLKQLQELL-----RDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAG 461
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
V +R VQ + GE+ ++ ATI+FGMGID+ +VRFV+H + ++ +YYQESGRAGR
Sbjct: 462 VPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGR 521
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DGLQ+ C + + + +++ ++ + M +YCE
Sbjct: 522 DGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCE 570
>gi|147783250|emb|CAN73069.1| hypothetical protein VITISV_005845 [Vitis vinifera]
Length = 1640
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 214/406 (52%), Gaps = 52/406 (12%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + + D FV MPTG G + + + PG +
Sbjct: 314 IFGNRTFR-PLQHQACKASVTK-RDCFVLMPTGG----GKSLCYQLPATLQPGVTVV--- 364
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL-YQLELIVSGQTKTENKAILEELRLV 161
+ P+LS + I+T + + S QT ++ A+L+ELR
Sbjct: 365 --------VCPLLSLI-------QDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRKD 409
Query: 162 KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
KP KLLYVTPER A +F +L+ L +LA VVDEAHCVS+WGHDFRP YR LG
Sbjct: 410 KPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGC 469
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK-VFKTSTFRSNLFYDVIFDDLLK 279
L+Q + +P++ALTATA V++DI++ L+ P+ V +TS RSNL Y+VI
Sbjct: 470 LKQNFPD-VPVMALTATATQPVRKDILNSLRI--PHALVLETSFDRSNLKYEVI------ 520
Query: 280 DSYAHVKEFIEKC--LGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNK 326
KE +++ L KD N CGI+YC ++ +++ L K ++
Sbjct: 521 ---GKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSA 577
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R VQ+ + G++++I ATI+FGMGI++ NVRFV+H M SI YYQESGRAGRD L
Sbjct: 578 RQRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDL 637
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C + + + +++ K E + M +YCE
Sbjct: 638 PAVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKMQQYCE 683
>gi|326336566|ref|ZP_08202735.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691231|gb|EGD33201.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 730
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 48/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK++FGF++FK + Q++ I I+ H FV MPTG G + + +
Sbjct: 8 DLQKALKSIFGFNAFKGK-QEEIITSIM-DNHHTFVLMPTGG----GKSLCYQLPALLKE 61
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + ISP+++ ++ +V G S ++ ++ S TK E +
Sbjct: 62 GTAIV-----------ISPLIA-----LMKNQVDVVRGISGTDKIAHVLNSSLTKGEIRT 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++E++R KLLYV PE + + L+ + ++++ VDEAHC+SEWGHDFRP
Sbjct: 106 VMEDIR--NGETKLLYVAPESLTKDEYADFLKTI----NISFVAVDEAHCISEWGHDFRP 159
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR + + GN+IPIIALTATA V++DI+ L + VFK+S R NL+Y+V
Sbjct: 160 EYRNIKAIIDRLGNNIPIIALTATATTKVQEDILKNLGIPEAL-VFKSSFNRPNLYYEV- 217
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + + F+++ G+ GIIYC +R+ +LA L+
Sbjct: 218 -RPKTKNINSDIIRFVKQHPGQ------SGIIYCLSRKSVEELAQTLQVNGITAIPYHAG 270
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ E+ V+ ATI+FGMGID+ +VRFV+H+ +P SI +YYQE+GRAGR
Sbjct: 271 LDAKTRAKHQDMFLMEEVEVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGR 330
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + YC ++ + LE
Sbjct: 331 DGGEGYCLAFYCYKDIEKLE 350
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 653 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 702
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 703 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 744
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 745 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 804
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 805 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 862
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +A LR+ ++ E
Sbjct: 863 KVAFDCL-EWIRKYHPYDS-----GIIYCLSRRECDTMAGTLRKDGLAALAYHAGLSDSE 916
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI AT++FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 917 RDEVQHKWINQDGCQVICATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEM 976
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 977 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTKETHFNNLYSMVHYCE 1021
>gi|6714387|gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
Length = 624
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 206/409 (50%), Gaps = 58/409 (14%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG F+ LQ +A R + R D FV MPTG G + + + G +
Sbjct: 219 IFGNKVFR-PLQHQACRASMER-KDCFVLMPTGG----GKSLCYQLPATLKAGVTIV--- 269
Query: 103 NVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
ISP+LS + L+F T + S QT ++ A+L
Sbjct: 270 --------ISPLLSLIQDQIVALNLKFGIPAT-------------FLNSQQTSSQAAAVL 308
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR P KLLYVTPE+ A + SF L+ L R LA VVDEAHCVS+WGHDFRP
Sbjct: 309 QELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWGHDFRPD 368
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR LG L+Q +P++ALTATA SV QD++ L+ + V K S R NL Y+VI
Sbjct: 369 YRELGCLKQ-NFPRVPVMALTATATESVCQDVLKSLRIPRA-PVLKMSFDRINLKYEVIV 426
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
K+ ++E + +D + GI+YC ++ D+A L K
Sbjct: 427 K--TKEPLKQLQELL-----RDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAG 479
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
V +R VQ + GE+ ++ ATI+FGMGID+ +VRFV+H + ++ +YYQESGRAGR
Sbjct: 480 VPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGR 539
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DGLQ+ C + + + +++ ++ + M +YCE
Sbjct: 540 DGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCE 588
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 209/406 (51%), Gaps = 52/406 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 288 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 337
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 338 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 379
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 380 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 439
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 440 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 497
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 498 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 551
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 552 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 611
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 612 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCEN 657
>gi|302345889|ref|YP_003814242.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
gi|302148973|gb|ADK95235.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
Length = 727
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 201/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK + Q+ IR+ LL HD FV MPTG + S++ +
Sbjct: 4 EVNLTEKLKHYFGFDKFKGD-QEAIIRN-LLDGHDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG+TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEIDQVRAD------IVSGRTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENMEFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + P+IALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRCAIETIGTA-PVIALTATATDKVRTDIVRSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRPKKSDDDTNKQIIKFIKQHTGK------SGIIYCLSRKKVEELAAILQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ E+++I ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S+ LE
Sbjct: 325 GRAGRDGEEGICVVFYSKKDLNKLE 349
>gi|228470561|ref|ZP_04055418.1| ATP-dependent DNA helicase RecQ [Porphyromonas uenonis 60-3]
gi|228307688|gb|EEK16664.1| ATP-dependent DNA helicase RecQ [Porphyromonas uenonis 60-3]
Length = 734
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 217/421 (51%), Gaps = 63/421 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT L +FGF+ FK +K I LL HD FV MPTG+ G + + I G
Sbjct: 5 LTELLSKIFGFEEFKG--NQKEIIQSLLEGHDTFVLMPTGS----GKSLCYQLPALIMEG 58
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I +SP+++ ++ + D TG +D+ + + NKA L
Sbjct: 59 TAII-----------VSPLIA--LMKNQVDALRETTGSNDIAHV------LNSSLNKAQL 99
Query: 156 EEL--RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+++ + KLLYV PE E+ + R K+++ +DEAHC+SEWGHDFR
Sbjct: 100 DQVYQDVSAGATKLLYVAPESLGKAENIEFF-----RKIKISFFAIDEAHCISEWGHDFR 154
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDI---ISVLKFNKPYKVFKTSTFRSNLF 269
P YR++ + G PIIALTATA P V+ DI + +L N +FK+S R NL+
Sbjct: 155 PEYRKIRPVVDEIGRR-PIIALTATATPKVEHDIRKNLGILDGN----IFKSSFNRPNLY 209
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y V + +D A + FI K + N GIIYC +RE +L+ L+
Sbjct: 210 YSV--EPKGEDVNARIIRFIRK------RPNKSGIIYCMSREKVMNLSKLLQMNGIKALP 261
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ ERS Q++F+ E VI ATI+FGMGID+ +VR+V+H+ MP S+ YYQE+G
Sbjct: 262 YHAGLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETG 321
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE---QLELKFKNYLSMLEYCEQGYF 436
RAGRDG + YC +++E + LE ++ ++E QL K + ++ C + Y
Sbjct: 322 RAGRDGGEGYCLAFYNEKDIQKLENFMQGKPIAEQEIGRQLLAKTSTF-ALTPMCRRAYL 380
Query: 437 L 437
L
Sbjct: 381 L 381
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 228/437 (52%), Gaps = 55/437 (12%)
Query: 13 VGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSM 72
VG+ SS+ G+ + ++ + ++ F F+ Q +AI + L D FV M
Sbjct: 678 VGQISSVEGHPWSK--------DVKSAMRETFKLRGFRPN-QLEAI-NSTLSGKDTFVLM 727
Query: 73 PTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT 131
PTG SL + S I G + ISP+LS + V
Sbjct: 728 PTGGGKSLCYQLPS------------IIRTGKTKGVTIVISPLLSLMQDQ--------VA 767
Query: 132 GRSDLYQLELIVSGQ-TKTENKAILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHL 187
L +++G +K E I+ LR ++ I+LLYVTPE A + + +L L
Sbjct: 768 HLQKLNVKAFLINGDVSKDERATIMNNLRSLRADSLIQLLYVTPEMLAKSRAMESVLLQL 827
Query: 188 VRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDI 246
+KLA IV+DEAHCVS+WGHDFRP Y LG +R+ ++G +P++ALTATA P+V+ D+
Sbjct: 828 HSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMREKYSG--VPVMALTATATPNVQVDV 885
Query: 247 ISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIY 306
I L+ K +VF S R NL Y+V +D+ + + I ++ CGIIY
Sbjct: 886 IHNLRM-KGCEVFTQSFNRPNLTYEVRKKGRAQDALKDIADLI-----TNDYPEKCGIIY 939
Query: 307 CRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGID 355
C +R+ +A L K ++ +R VQ + G+ NVI ATI+FGMGID
Sbjct: 940 CLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMGID 999
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y++ + S+ Y+IK + T E
Sbjct: 1000 KADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETTHE 1059
Query: 416 QLELKFKNYLSMLEYCE 432
Q + + + + ++CE
Sbjct: 1060 QKQRQRQMLRHVTQFCE 1076
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 662 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 753
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 754 KKDPIIKLLYVTPEKICASNRLVSTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 813
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 814 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 871
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 872 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 986 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1030
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 650 FGLHNFRTN-QLEAINATLL-GEDCFILMPTGG----GKSLCYQLPACVLPGVTIV---- 699
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 700 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLS 741
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + +L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 742 KKDPIIKLLYVTPEKVCASNRLISILENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRM 801
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA V+ DI++ LK +P +VF S R NL Y V+
Sbjct: 802 NMLRQ-KFPSVPVMALTATANSRVQTDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 859
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L++ ++
Sbjct: 860 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRWECDTMADTLQKDGLAALAYHAGLSDAA 913
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 914 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 973
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + R E F N SM+ YCE
Sbjct: 974 SHCLLFYTYHDVTRLKRLIMMEKDGNRHTKETHFNNLYSMVHYCE 1018
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|21227319|ref|NP_633241.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
gi|20905673|gb|AAM30913.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
Length = 896
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 227/429 (52%), Gaps = 66/429 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ +F+ LQ++ IR +L R D+FV MPTG G + ++P +
Sbjct: 29 LRQYFGYTAFR-PLQEEIIRDVLDR-KDVFVLMPTGG----GKSIC----YQLP---SLL 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G +SP++S K + ++ + S Q+ EN+ +
Sbjct: 76 LDGVTV----VVSPLISLM-------KDQVDGLEANGIAAACMNSTQSPRENRDVKNAF- 123
Query: 160 LVKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
++ R+K+LY+ PER + +F +L + K++ +DEAHC+SEWGHDFRP YR+L
Sbjct: 124 -LENRLKVLYIAPERLMMPGTFAFL-----KKGKVSLFAIDEAHCISEWGHDFRPEYRKL 177
Query: 219 GELRQFTGN--SIPIIALTATAEPSVKQDIISVLKFN-KPYKVFKTSTF-RSNLFYDVIF 274
LR +P+IALTATA VK+DI+S L N P K ++F RSNL+Y+V
Sbjct: 178 KLLRDPKNGFPDVPVIALTATATERVKKDIVSQLGLNIDPEKGPYVASFNRSNLYYEV-- 235
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH--- 327
KD+++ + +++ + G+ GIIYC++R + L L R + H
Sbjct: 236 -RPKKDTFSEITDYLLRHRGE------AGIIYCQSRNNVETLTRKLNLAGFRALPYHAGL 288
Query: 328 ---ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ERSR QE F+R ++++I ATI+FGMGI++ NVRFV+H+ +P ++ +YYQE+GR GRD
Sbjct: 289 SDSERSRNQEMFIRDDVDIIVATIAFGMGINKSNVRFVIHYDLPRNLESYYQETGRGGRD 348
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG---------Y 435
G C ++ S + +EY I T+ K + + L M+ YCE Y
Sbjct: 349 GSPCECILFFSRGDRFKIEYFIAQKTNEKEKDISL--VQLRQMVAYCEGNKCRRQTLMEY 406
Query: 436 FLVILVFPC 444
F L PC
Sbjct: 407 FGEELSTPC 415
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 32 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 81
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 82 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 123
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 124 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 183
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 184 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 241
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 242 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 295
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 296 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 355
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 356 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCE 400
>gi|374853612|dbj|BAL56515.1| ATP-dependent DNA helicase RecQ [uncultured Bacteroidetes
bacterium]
Length = 717
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 225/414 (54%), Gaps = 59/414 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L L+ FG+ SF+ + Q++ IR LL ++ V MPTGA G + + + P
Sbjct: 3 DLKEALERYFGYKSFR-QPQEEIIR-TLLEGKNVMVIMPTGA----GKSLCYQLPALLLP 56
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ-LELIVSGQTKTENKA 153
G + +SP+++ ++ + D Q ++ + + ++
Sbjct: 57 GTALV-----------VSPLIA------------LMKNQVDQMQAYDIPAAFLNSSLSRR 93
Query: 154 ILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
EE++ ++ ++KLLYV PE ++ESF +L L +++++ VDEAHC+SEWGHDF
Sbjct: 94 EYEEVKRACLQGKVKLLYVAPETLLSESFAEVLAQL----QISFVAVDEAHCISEWGHDF 149
Query: 212 RPTYRRLGE-LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
RP YRR+ LR +PIIALTATA P V++DI+ L+ VF+TS R NL+Y
Sbjct: 150 RPEYRRIRHALRDLP--PMPIIALTATATPRVQRDILENLEILDAV-VFRTSFNRPNLYY 206
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+ + A +KE ++ + +A GI+YC +R D+A+ L+
Sbjct: 207 QITPK---RSHQATLKEIVQYIRSRPGQA---GIVYCHSRRRVEDVANILQANGIKALPY 260
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R+R Q++F+ EI VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GR
Sbjct: 261 HAGMDAATRTRNQDAFLNEEIQVIVATIAFGMGIDKPDVRFVIHFDVPKSIENYYQETGR 320
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
AGRDGL + C +Y+ + L+ +K +++RE + + M +CE G
Sbjct: 321 AGRDGLPADCILYYDYNDILKLDRFLKDKPASEREAIVFLLQ---EMAYFCETG 371
>gi|357043893|ref|ZP_09105579.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
gi|355367947|gb|EHG15373.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
Length = 727
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 201/386 (52%), Gaps = 55/386 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-----VSLVGSVVSAR 87
E LT KLK FGFD FK + Q+ IR+ LL D FV MPTG L ++
Sbjct: 4 EVNLTEKLKHYFGFDKFKGD-QESIIRN-LLAGRDTFVLMPTGGGKSLCYQLPSLIMDGT 61
Query: 88 SRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ V P A ++ V NG + YL K I R+D I+SG+T
Sbjct: 62 AIVVSPLIA--LMKNQVDVINGISEEDGVAHYLNSSLKKAEIDNVRAD------ILSGRT 113
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
K LLYV PE E L+ + K+++ +DEAHC+SEW
Sbjct: 114 K------------------LLYVAPESLNKEENMEFLKSV----KISFYAIDEAHCISEW 151
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP YR++ + G + P+IALTATA V+ DII L + FK+S R N
Sbjct: 152 GHDFRPEYRKIRHAIETIGLA-PVIALTATATDKVRTDIIRSLGIEDCAE-FKSSFNRPN 209
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 210 LYYEVRPKKNDDDTNKQIIKFIKQHAGK------SGIIYCLSRKKVEELAAILQANDIKA 263
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ RS+ Q+ F+ EI+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE
Sbjct: 264 APYHAGLDSETRSKTQDDFLMEEIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQE 323
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLE 403
+GRAGRDG + C +++S++ K LE
Sbjct: 324 TGRAGRDGEEGICVVFYSKNDLKKLE 349
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo abelii]
Length = 1398
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 207/401 (51%), Gaps = 52/401 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 652 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 701
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKP 163
ISP+ ++ IV D + +T +E I +L P
Sbjct: 702 -------ISPL-----------RSLIV----DQIPATYLTGDKTDSEATNIYLQLSKKDP 739
Query: 164 RIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+ LR
Sbjct: 740 IIKLLYVTPEKICASNRLVSTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLR 799
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSY 282
Q S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+ K ++
Sbjct: 800 Q-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPKKVAF 857
Query: 283 AHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSRV 332
+ E+I K D+ GIIYC +R +AD L+R ++ R V
Sbjct: 858 DCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEV 911
Query: 333 QESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
Q+ ++ + + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG S+C
Sbjct: 912 QQKWINQDDCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEMSHCL 971
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
++++ H L+ +I + E F N SM+ YCE
Sbjct: 972 LFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1012
>gi|228473728|ref|ZP_04058475.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
gi|228274840|gb|EEK13658.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
Length = 729
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 48/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL LK++FGF +FK + Q++ IR I+ H FV MPTG G + + +
Sbjct: 7 ELQKALKSIFGFSAFKGK-QEEIIRSIM-DNHHTFVLMPTGG----GKSLCYQLPALLKE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + ISP+++ ++ ++ G S ++ ++ S TK E +
Sbjct: 61 GTAIV-----------ISPLIA-----LMKNQVDVIRGISGTDKIAHVLNSSLTKGEIRN 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++E++R KLLYV PE + + L+ + ++++ VDEAHC+SEWGHDFRP
Sbjct: 105 VMEDIR--NGDTKLLYVAPESLTKDEYADFLKTI----NISFVAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR + + + G IPIIALTATA V++DI+ L + VFK+S R NL+Y+V
Sbjct: 159 EYRNIKTIIERLGEGIPIIALTATATTKVQEDILKNLGVPEA-NVFKSSFNRPNLYYEV- 216
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + + F+++ G+ GIIYC +R+ +LA L+
Sbjct: 217 -RPKTKNINSDIIRFVKQRPGQ------SGIIYCLSRKSVEELAQTLQVNGITAIPYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H+ +P SI +YYQE+GRAGR
Sbjct: 270 LDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + YC ++ + LE
Sbjct: 330 DGGEGYCLAFYCYKDIEKLE 349
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 662 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 753
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 754 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 813
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 814 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 871
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 872 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCE 1030
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|327312566|ref|YP_004328003.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
gi|326944958|gb|AEA20843.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
Length = 727
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 197/382 (51%), Gaps = 53/382 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT KLK FGFD FK + Q+ IR+ LL HD FV MPTG + S++ + +
Sbjct: 7 LTGKLKHYFGFDKFKGD-QEAIIRN-LLAGHDTFVLMPTGGGKSLCYQLPSLIMEGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ P + N V NG + YL K + R+D IVSG TK
Sbjct: 65 VSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEVDQVRAD------IVSGHTK--- 114
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
LLYV PE E L R K+++ +DEAHC+SEWGHDF
Sbjct: 115 ---------------LLYVAPESLNKEENIAFL----RSVKISFYAIDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ G + P+IALTATA V+ DI+ L + FK+S R NL+Y+
Sbjct: 156 RPEYRKIRHAIDAIGVA-PVIALTATATDKVRTDIVRSLGIEDCVE-FKSSFNRPNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 214 VRAKKSDDDTDRQIIKFIKQHAGK------SGIIYCLSRKKVEELAAVLQANDIKAAPYH 267
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RSR Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 268 AGLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 327
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C +++S+ LE
Sbjct: 328 GRDGEEGLCIVFYSKKDLNKLE 349
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 662 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 753
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 754 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 813
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 814 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 871
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 872 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCE 1030
>gi|288803880|ref|ZP_06409305.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
gi|288333645|gb|EFC72095.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
Length = 727
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 201/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK + Q+ IR+ LL HD FV MPTG + S++ +
Sbjct: 4 EVNLTEKLKHYFGFDKFKGD-QEAIIRN-LLDGHDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG+TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEIDQVRAD------IVSGRTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENMEFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + P+IALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRCAIETIGTA-PVIALTATATDKVRTDIVRSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRPKKSDDDTNKQIIKFIKQHTGK------SGIIYCLSRKKVEELAAILQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ E+++I ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S+ LE
Sbjct: 325 GRAGRDGEEGICIVFYSKKDLNKLE 349
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 148/413 (35%), Positives = 213/413 (51%), Gaps = 51/413 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL A K FG F+ Q +AI LL H+ F+ MPTG G + + I
Sbjct: 385 ELLAVFKKTFGLRHFRPN-QFEAINAALL-GHNCFILMPTGG----GKSLCYQLPAVILK 438
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTE 150
G + ISP+ K+ I+ L L++ ++S T E
Sbjct: 439 GITVV-----------ISPL-----------KSLIIDQTQKLKSLDIPAAHLLSSITPDE 476
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I EL P +KLLYVTPE+ A + +L +L N LA IV+DEAHCVS+WGH
Sbjct: 477 ENTIYSELWGADPGLKLLYVTPEKVAASNKLIQVLNNLHCRNLLARIVIDEAHCVSQWGH 536
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y+RLG +Q N +PI+ALTATA V++D++ L + K F +S R NL
Sbjct: 537 DFRPDYKRLGVFKQNYQN-VPIMALTATATQRVRKDVLHQLNIEET-KWFVSSFNRPNLV 594
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
Y+VI K S + + I K A GIIYC T++ + A + + V+
Sbjct: 595 YEVI-PKKGKSSLLEIAKLI-----KSKFARQSGIIYCMTKKECDNTAIFMSGEGIKAVS 648
Query: 326 KH------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H +R+ VQ + + NV+ ATI+FGMGID+ +VR+V+H+ +P SI +YQESG
Sbjct: 649 YHAGLTDKKRNDVQMQWTSNKSNVVCATIAFGMGIDKPDVRYVIHYSLPQSIEGFYQESG 708
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG +YC IY++ ++ +I+ E +++F N ++ YCE
Sbjct: 709 RAGRDGDVAYCLIYYNYSDMHRIKKLIEIGGGATYETKKVRFHNLCRIVSYCE 761
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 216/406 (53%), Gaps = 45/406 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
+ +F ++F+ + Q++AI L D+FV MPTG G V +IP D
Sbjct: 365 MHDMFKLNAFR-KNQREAI-DATLDAKDVFVLMPTGG----GKSVC----YQIPACVDL- 413
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
G + ISP+LS +D +V+ Y G + +AI ++LR
Sbjct: 414 --GKTHGVSIVISPLLS----LIQDQVQQLVSKDVPSYAYS---GGTALADKRAIQDDLR 464
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
KP +LLYVTPE + +F +L+ L ++LA VVDEAHCVS+WGHDFRP Y L
Sbjct: 465 RPKPITRLLYVTPEMLGQSNAFKDILKQLHAKDQLARFVVDEAHCVSQWGHDFRPDYTNL 524
Query: 219 GELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
G+LR F G +P +ALTATA VK DI + L+ K K+S R NLFY++ +
Sbjct: 525 GQLRDDFPG--VPFMALTATANERVKSDIKNSLRM-KGCVELKSSFNRKNLFYEIKPKNG 581
Query: 278 LKDSYAHVKEFIEKCLGKDNK-ANNCGIIYCRTREHTTDLADALRRK-----------VN 325
K YA ++ I +NK GIIYC ++ D+A LR + ++
Sbjct: 582 -KTVYADIQNLI------NNKFRGQTGIIYCSSKRACEDVASKLRHEYGLPAQHYHAGLS 634
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+ +R+++Q ++ + +I AT++FGMGID+ +VRFV+H+ MP S+ YYQE+GRAGRDG
Sbjct: 635 RDDRTKIQINWQKNRFLIICATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQETGRAGRDG 694
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
S C +Y + ++ Y+I T EQ + N ++++C
Sbjct: 695 EHSNCILYFAYKDTITINYLIDNGEGT-HEQKATQRSNLRQVVQFC 739
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 662 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 753
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 754 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 813
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 814 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 871
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 872 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCE 1030
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 662 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 753
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 754 KKDPIIKLLYVTPEKICASNRLISTLENLYERRLLARFVIDEAHCVSQWGHDFRQDYKRM 813
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 814 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 871
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 872 KVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMADTLQRDGLSALAYHAGLSDSA 925
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R +Q+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 926 RDEIQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 986 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1030
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 712
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 713 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 207/381 (54%), Gaps = 46/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L LK FGF FK LQ+ I+ I+ + FV MPTG G + + +
Sbjct: 5 ENDLQLALKHYFGFGKFKG-LQEDVIKSII-NNQNTFVIMPTGG----GKSLCYQLPALV 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D ++ + + + + S TKTE K
Sbjct: 59 KDGTAIV-----------ISPLIA--LMKNQVDAIRGISSNNGIAHV--LNSSLTKTEVK 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++++ KLLYV PE E + L+ + +++++ VDEAHC+SEWGHDFR
Sbjct: 104 QVMQDIK--SGITKLLYVAPESLTKEDYIEFLRTI----QISFVAVDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR + + + G+ IPII LTATA P V++DI+ L K FK S R NL+Y+V
Sbjct: 158 PEYRNIRAIIKRLGDDIPIIGLTATATPKVQEDILKNLGMTDA-KTFKASFNRPNLYYEV 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K+ A + FI++ GK GIIYC +R+ +LA L+
Sbjct: 217 --RPKTKNVDADIIRFIKQNPGK------SGIIYCLSRKRVEELAQVLQVNGISAVPYHA 268
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAG
Sbjct: 269 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 328
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C ++S + LE
Sbjct: 329 RDGGEGHCLAFYSYKDVEKLE 349
>gi|146165477|ref|XP_001015163.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila]
gi|146145471|gb|EAR94918.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila SB210]
Length = 1198
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 216/413 (52%), Gaps = 47/413 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+Q++ L ++G+ +F+ ++AI + +L D+F MPTG +S
Sbjct: 391 DQKVNDILANVYGYKNFRNN--QRAIINCVLENKDVFAMMPTGG---------GKSLTFQ 439
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKTEN 151
PG + +G IS I + R + I V G YQ EL
Sbjct: 440 IPG--LVQDGVYIVIMPLISLISDQYNHMLRLNIPVIRVQGARKNYQREL---------- 487
Query: 152 KAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+IL K + K++ +TPE+ + E F+ L + NKL V+DEAHCVS+WGH+
Sbjct: 488 DSILYS---DKNQSKIVLITPEKISSDEDFNQFLSQIYEKNKLRRFVIDEAHCVSQWGHE 544
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FR Y LG+L+ N IP +ALTATA K DII +L K F++S R+NL+Y
Sbjct: 545 FRKDYLSLGQLKIKYPN-IPTLALTATATEKCKIDIIQLLNM-KGTLYFQSSFNRTNLYY 602
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
DV+ K + H+ FI++ K GIIYC T++ + +LA L +
Sbjct: 603 DVVRIPQ-KVTIEHMVNFIKEKFNKQ-----SGIIYCCTKKDSEELASKLNIQYKINAAY 656
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+N E+ +VQ+ +M +I VI ATI+FGMGID+ +VRFV+H+ SI YYQE+G
Sbjct: 657 YHGSMNDKEKEQVQQLWMSNDIQVICATIAFGMGIDKHDVRFVIHYTFSKSIENYYQEAG 716
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG S+CRIY+S K SL ++I + + +++ E + M+ YCE
Sbjct: 717 RAGRDGKISHCRIYYSPKDKNSLVFLITNNEGSNKQKKEECMAHLSKMIRYCE 769
>gi|452209801|ref|YP_007489915.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
gi|452099703|gb|AGF96643.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
Length = 876
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 146/429 (34%), Positives = 227/429 (52%), Gaps = 66/429 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ +F+ LQ++ IR +L R D+FV MPTG G + ++P +
Sbjct: 9 LRQYFGYTAFR-PLQEEIIRDVLDR-KDVFVLMPTGG----GKSIC----YQLP---SLL 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G +SP++S K + ++ + S Q+ EN+ +
Sbjct: 56 LDGVTV----VVSPLISLM-------KDQVDGLEANGIAAACMNSTQSPRENRDVKNAF- 103
Query: 160 LVKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
++ R+K+LY+ PER + +F +L + K++ +DEAHC+SEWGHDFRP YR+L
Sbjct: 104 -LENRLKVLYIAPERLMMPGTFAFL-----KKGKVSLFAIDEAHCISEWGHDFRPEYRKL 157
Query: 219 GELRQFTGN--SIPIIALTATAEPSVKQDIISVLKFN-KPYKVFKTSTF-RSNLFYDVIF 274
LR +P+IALTATA VK+DI+S L N P K ++F RSNL+Y+V
Sbjct: 158 KLLRDPKNGFPDVPVIALTATATERVKKDIVSQLGLNIDPEKGPYVASFNRSNLYYEV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH--- 327
KD+++ + +++ + G+ GIIYC++R + L L R + H
Sbjct: 216 -RPKKDTFSEITDYLLRHRGE------AGIIYCQSRNNVETLTRKLNLAGFRALPYHAGL 268
Query: 328 ---ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ERSR QE F+R ++++I ATI+FGMGI++ NVRFV+H+ +P ++ +YYQE+GR GRD
Sbjct: 269 SDSERSRNQEMFIRDDVDIIVATIAFGMGINKSNVRFVIHYDLPRNLESYYQETGRGGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG---------Y 435
G C ++ S + +EY I T+ K + + L M+ YCE Y
Sbjct: 329 GSPCECILFFSRGDRFKIEYFIAQKTNEKEKDISL--VQLRQMVAYCEGNKCRRQTLMEY 386
Query: 436 FLVILVFPC 444
F L PC
Sbjct: 387 FGEELSTPC 395
>gi|313885824|ref|ZP_07819567.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924728|gb|EFR35494.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica
PR426713P-I]
Length = 733
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 216/418 (51%), Gaps = 57/418 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT L +FGF+ FK +K I LL HD FV MPTG+ G + + I G
Sbjct: 5 LTELLSKIFGFEEFKG--NQKEIIQSLLEGHDTFVLMPTGS----GKSLCYQLPALIMEG 58
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I +SP+++ ++ + D TG +D+ + + NKA L
Sbjct: 59 TAII-----------VSPLIA--LMKNQVDALRETTGSNDIAHV------LNSSLNKAQL 99
Query: 156 EEL--RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+++ + KLLYV PE E+ + R K+++ +DEAHC+SEWGHDFR
Sbjct: 100 DQVYHDVSSGDTKLLYVAPESLGKAENIEFF-----RQVKISFFAIDEAHCISEWGHDFR 154
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ + G PIIALTATA P V+ DI L + ++FK+S R NL+Y V
Sbjct: 155 PEYRKIRPVVDEIGRR-PIIALTATATPKVEHDIRKNLGILEG-RIFKSSFNRPNLYYSV 212
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +D A + FI K + N GIIYC +RE +L+ L+
Sbjct: 213 --EKKGEDVNARIIRFIRK------RPNKSGIIYCMSREKVMNLSKLLQMNGIKALPYHA 264
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ERS Q++F+ E VI ATI+FGMGID+ +VR+V+H+ MP S+ YYQE+GRAG
Sbjct: 265 GLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAG 324
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE---QLELKFKNYLSMLEYCEQGYFL 437
RDG + YC +++E + LE ++ ++E QL K + ++ C + Y L
Sbjct: 325 RDGGEGYCLAFYNEKDIQKLENFMQGKPIAEQEIGRQLLAKTSTF-ALTPMCRRAYLL 381
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 205/391 (52%), Gaps = 48/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ Q K I+ L + D+ V MPTG G + + + PG
Sbjct: 7 LEQSLKYFFGYDSFRPG-QAKIIQEAL-QNRDLLVIMPTGG----GKSLCFQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ L T + G + + S + ++ +AI
Sbjct: 61 LTVV-----------VSPLIA---LMQDQVDTLLDNGIGATFLNSSLKSEEVRSREQAI- 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+K +IKLLYV PER + + F L L +++ +DEAHCVSEWGHDFRP Y
Sbjct: 106 -----IKGKIKLLYVAPERLLNDKFTPFLDFLAEKIGVSFFAIDEAHCVSEWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+L +LRQ +P++ALTATA V++DII L +P + TS R NL YDV F
Sbjct: 161 RQLKQLRQ-RYPQVPMLALTATATKRVREDIIHQLALKQP-GIHITSFNRPNLDYDVQFK 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ + SY + +I + G GI+YC +R D+A L+ +
Sbjct: 219 E--RRSYNKLLSYIRQQKG-------SGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMA 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG
Sbjct: 270 DEARALNQNRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S K +EY+I ST +EQ
Sbjct: 330 EPAECTLFFSLSDLKKIEYLI-DQKSTPQEQ 359
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI +LL D FV MPTG G + + + PG +
Sbjct: 647 FGLHHFRTN-QLEAINAVLL-GEDCFVLMPTGG----GKSLCYQLPACVSPGVTIV---- 696
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 697 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEAANIYLQLS 738
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 739 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 798
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK KP +VF S R NL Y V+
Sbjct: 799 NMLRQ-KFPSVPMMALTATANPRVQKDILTQLKILKP-QVFSMSFNRHNLKYSVLPKKPK 856
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 857 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALSYHAGLSDSA 910
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ YYQESGRAGRDG
Sbjct: 911 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGEM 970
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + + F N SM+ YCE
Sbjct: 971 SHCLLFYNYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCE 1015
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 222/421 (52%), Gaps = 67/421 (15%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG SF+ ++ I + + D+FV MPTG G ++ + + G +
Sbjct: 462 KLVFGNHSFR--PNQREIINATMSGCDVFVLMPTGG----GKSLTYQLPALLCAGITLV- 514
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
ISP++S + + + ++ S + +G E IL+EL
Sbjct: 515 ----------ISPLVSLIQDQIMNLLQTNISAAS-------LSAGMEWAEQLEILQELSS 557
Query: 161 VKPRIKLLYVTPER-AVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHDFRPTYR 216
K + KLLYVTPE+ A +ES LL+HL N LA V+DEAHCVS+WGHDFRP Y+
Sbjct: 558 EKSKYKLLYVTPEKVAKSES---LLRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQ 614
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI--F 274
LG L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y V+
Sbjct: 615 GLGVLKQKFPN-IPMLALTATATTSVKEDVVQALGLVNCV-VFRQSFNRPNLWYSVVPKT 672
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKV 324
+ L+D + +FI ++N + CGIIYC +R + +ALR +
Sbjct: 673 NKCLED----IDKFI-----RENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSM 723
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ +R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRAGRD
Sbjct: 724 DPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRD 783
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTD-------------TSTKREQLELKFKNYLSMLEYC 431
G +S C +Y+S ++++I ++ LE +N L M+ YC
Sbjct: 784 GQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYC 843
Query: 432 E 432
E
Sbjct: 844 E 844
>gi|325268722|ref|ZP_08135351.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
gi|324988966|gb|EGC20920.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
Length = 727
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 200/385 (51%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK + Q+ IR+ LL HD FV MPTG + S++ +
Sbjct: 4 EVNLTGKLKHYFGFDKFKGD-QEAIIRN-LLSGHDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKAEIDQVRAD------IVSGHTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENIAFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + P+IALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRHAIEAIGVA-PVIALTATATDKVRTDIVRSLGIEDCVE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRAKKSDDDTDRQIIKFIKQHAGK------SGIIYCLSRKKVEELAAVLQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMEDLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S+ LE
Sbjct: 325 GRAGRDGEEGICIVFYSKKDLNKLE 349
>gi|303236792|ref|ZP_07323371.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
gi|302482960|gb|EFL45976.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
Length = 750
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 204/386 (52%), Gaps = 55/386 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK Q+ IR++L +D FV MPTG + S++ +
Sbjct: 27 EVNLTEKLKHFFGFDKFKG-AQEAIIRNVLA-GNDTFVLMPTGGGKSLCYQLPSLIMEGT 84
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N V NG + + YL KT I + D++ SG+TK
Sbjct: 85 AIVISPLIALMKN-QVDVINGISAEDGVAHYLNSSLKKTEIDQVKVDIH------SGKTK 137
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
LLYV PE E S + R K+++ +DEAHC+SEW
Sbjct: 138 ------------------LLYVAPESLNKEDSIEFF-----RTVKVSFYAIDEAHCISEW 174
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP YR++ + G + PIIALTATA V+ DI+ L + FK+S R+N
Sbjct: 175 GHDFRPEYRKIRQAVDQIGKA-PIIALTATATDKVRSDIVKSLGIEGCSE-FKSSFNRAN 232
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKH 327
L+Y+V +D+ + +FI++ GK GIIYC +R+ +LA L+ K
Sbjct: 233 LYYEVRPKKNEEDTNRQIIKFIKQNQGK------SGIIYCLSRKKVEELAAVLQANEIKA 286
Query: 328 E----------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
E RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE
Sbjct: 287 EPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQE 346
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLE 403
+GRAGRDG + C +++S++ K LE
Sbjct: 347 TGRAGRDGEEGKCIVFYSKNDLKKLE 372
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 218/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ I++IL++ D V MPTG G + + + G +
Sbjct: 5 LKNYFGYDSFR-PLQQDIIQNILVQ-KDTLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +TEN + E
Sbjct: 59 -----------VSPLISLMKDQVESLQANGIAARA-------LNSSNNETENINLRREC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PER + E+ ++LL+ + +++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 100 -LQGKIKLLYISPERLLIET-NFLLKDI----QISLFAIDEAHCISQWGHDFRPEYTQLK 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PI+ALTATA+ ++DI+ L P K+F +S R NL +V
Sbjct: 154 VLRNQFP--KVPIVALTATADKITRKDIVQQLALKDP-KIFISSFDRPNLSLEVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD + EFIEK N CGIIYC +R T ++A L ++ ++
Sbjct: 211 KDKMRTILEFIEK------HKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDM 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG++S
Sbjct: 265 RDKAQNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMES 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V+ + +T+ Q E+ + M +Y E
Sbjct: 325 DTLLFYSLG-----DLVMLSKFATESSQQEINLEKLHRMQQYAE 363
>gi|332300231|ref|YP_004442152.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica DSM
20707]
gi|332177294|gb|AEE12984.1| ATP-dependent DNA helicase RecQ [Porphyromonas asaccharolytica DSM
20707]
Length = 733
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 145/418 (34%), Positives = 215/418 (51%), Gaps = 57/418 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT L +FGF+ FK +K I LL HD FV MPTG+ G + + I G
Sbjct: 5 LTELLSKIFGFEEFKG--NQKEIIQSLLEGHDTFVLMPTGS----GKSLCYQLPALIMEG 58
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I +SP+++ ++ + D TG +D+ + + NKA L
Sbjct: 59 TAII-----------VSPLIA--LMKNQVDALRETTGSNDIAHV------LNSSLNKAQL 99
Query: 156 EEL--RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+++ + KLLYV PE E+ + R K+++ +DEAHC+SEWGHDFR
Sbjct: 100 DQVYHDVSSGDTKLLYVAPESLGKAENIEFF-----RQVKISFFAIDEAHCISEWGHDFR 154
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ + G PIIALTATA P V+ DI L ++FK+S R NL+Y V
Sbjct: 155 PEYRKIRPVVDEIGRR-PIIALTATATPKVEHDIRKNLGILDG-RIFKSSFNRPNLYYSV 212
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +D A + FI K + N GIIYC +RE +L+ L+
Sbjct: 213 --EKKGEDVNARIIRFIRK------RPNKSGIIYCMSREKVMNLSKLLQMNGIKALPYHA 264
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ERS Q++F+ E VI ATI+FGMGID+ +VR+V+H+ MP S+ YYQE+GRAG
Sbjct: 265 GLDAKERSANQDAFLSEECRVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAG 324
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE---QLELKFKNYLSMLEYCEQGYFL 437
RDG + YC +++E + LE ++ ++E QL K + ++ C + Y L
Sbjct: 325 RDGGEGYCLAFYNEKDIQKLENFMQGKPIAEQEIGRQLLAKTSTF-ALTPMCRRAYLL 381
>gi|325855159|ref|ZP_08171782.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
gi|325483896|gb|EGC86840.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
Length = 727
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 194/383 (50%), Gaps = 55/383 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-----VSLVGSVVSARSRV 90
LT KLK FGFD FK ++AI LL HD FV MPTG L ++ + V
Sbjct: 7 LTGKLKHYFGFDKFKG--NQEAIIRNLLAGHDTFVLMPTGGGKSLCYQLPALIMEGTAIV 64
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P A ++ V NG + YL K + R+D IVSG TK
Sbjct: 65 ISPLIA--LMKNQVDVINGISEEDGVAHYLNSSLKKAEVDQVRAD------IVSGHTK-- 114
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
LLYV PE E L R K+++ +DEAHC+SEWGHD
Sbjct: 115 ----------------LLYVAPESLNKEENIAFL----RSVKISFYAIDEAHCISEWGHD 154
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR++ G + P+IALTATA V+ DI+ L + FK+S R NL+Y
Sbjct: 155 FRPEYRKIRHAIDAIGVA-PVIALTATATDKVRTDIVRSLGIEDCVE-FKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 213 EVRAKKSDDDTDRQIIKFIKQHAGK------SGIIYCLSRKKVEELAAVLQANDIKAAPY 266
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ RSR Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GR
Sbjct: 267 HAGLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + C +++S+ LE
Sbjct: 327 AGRDGEEGLCIVFYSKKDLNKLE 349
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 206/391 (52%), Gaps = 48/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ Q K I+ L + D+ V MPTG G + + + PG
Sbjct: 7 LEQSLKYFFGYDSFRPG-QAKIIQEAL-QNRDLLVIMPTGG----GKSLCFQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ L T + G + + S + ++ +AI
Sbjct: 61 LTVV-----------VSPLIA---LMQDQVDTLLDNGIGATFLNSSLKSEEVRSREQAI- 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+K +IKLLYV PER + + F L + +++ +DEAHCVSEWGHDFRP Y
Sbjct: 106 -----IKGKIKLLYVAPERLLNDKFTPFLDFIAEKIGVSFFAIDEAHCVSEWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+L +LRQ +P++ALTATA V++DII L+ +P + TS R NL YDV F
Sbjct: 161 RQLKQLRQ-RYPQVPMLALTATATKRVREDIIHQLELKQP-GIHITSFNRPNLDYDVQFK 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ + SY + +I + G GI+YC +R D+A L+ +
Sbjct: 219 E--RRSYNKLLSYIRQQKG-------SGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMA 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG
Sbjct: 270 DEARALNQNRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S K +EY+I ST +EQ
Sbjct: 330 EPAECTLFFSLSDLKKIEYLI-DQKSTPQEQ 359
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 208/414 (50%), Gaps = 52/414 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG SF+ Q +AI +L D F+ MPTG G + + +
Sbjct: 471 REMLKIFRQKFGLYSFRPN-QLQAINAAIL-GFDCFILMPTGG----GKSLCYQLPALLL 524
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ K+ I+ L L++ + G T +
Sbjct: 525 PGVTIV-----------ISPL-----------KSLILDQVQKLTSLDIPATHMSGGITDS 562
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I EL P +KLLYVTPE+ + + F +L L LA V+DEAHCVS+WG
Sbjct: 563 QALGIYRELSKKDPALKLLYVTPEKISASPKFCNILSSLYNRRLLARFVIDEAHCVSQWG 622
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L LR+ +P+I LTATA P V+ DI+ L+ P K F +S R NL
Sbjct: 623 HDFRPDYKKLNCLRE-NYPKVPVIVLTATATPRVRSDILHQLRITTP-KWFMSSFNRPNL 680
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y +I K S E I + K N+CGI+YC +R+ D A +R+
Sbjct: 681 RYSII----AKKSKNCSDEVI--AMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNSIKAL 734
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ + RS +Q ++ EI V+ ATI+FGMGID+ NVRFV+H +P SI YYQES
Sbjct: 735 SYHAGLTDNNRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQES 794
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG + C ++++ + +I+ D S ++ N M+ +CE
Sbjct: 795 GRAGRDGENADCILFYNYTDMHRIRKMIELDNSNP-TIIKTHIDNLFKMVSFCE 847
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + I PG +
Sbjct: 665 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACISPGVTIV---- 714
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 715 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLS 756
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 757 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 816
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 817 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKIVRP-QVFSMSFNRHNLKYYVLPKKPK 874
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + + GIIYC +R +AD L++ ++
Sbjct: 875 KVAFDCL-EWIRK-----HHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 928
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 929 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 988
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + + E F N SM+ YCE
Sbjct: 989 SHCVLFYTYHDVTRLKRLILMEKDGNQHTRETHFNNLYSMVHYCE 1033
>gi|91772141|ref|YP_564833.1| ATP-dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
gi|91711156|gb|ABE51083.1| ATP dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
Length = 647
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 212/404 (52%), Gaps = 55/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ LQ+ I +L + D+FV MPTG + + A I
Sbjct: 5 LQKYFGYSEFR-PLQEDIINDVLNK-KDVFVLMPTGGGKSICYQIPA-----------LI 51
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENKAILEEL 158
++G ++ ++S +D +V+ G S Y + + + +AI+E
Sbjct: 52 MDG--------LAVVVSPLISLMKDQVDGLVSNGISAAYLNSTLSYNEVQKITRAIVEG- 102
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ +LYV PER +S LL H+ ++ +DEAHC+SEWGHDFRP YRR+
Sbjct: 103 -----NVDILYVAPERLCMKSTQELLSHV----NVSLFAIDEAHCISEWGHDFRPEYRRM 153
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G L++ + +P+IALTATA VK++ I L P V+ S R+NL Y++ +
Sbjct: 154 GFLKKKYPD-VPVIALTATATAKVKENTIKQLDLVSP-SVYVASFDRANLSYEIRPKN-- 209
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
++Y + +++ G N GIIYC +R+ ++ L R+ +N +
Sbjct: 210 -NTYGDMVSYLKGQRG------NSGIIYCNSRKSVESVSTKLNREGFHALPYHAGLNDAK 262
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R QE F+R ++++I AT++FGMGID+ NVRFV+H+ +P ++ YYQE+GR GRDGL+
Sbjct: 263 RQDNQERFIRDDVDIIVATVAFGMGIDKPNVRFVIHYDLPKNLEGYYQETGRGGRDGLEC 322
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C +Y S ++Y+I D K+ + ++ M++YCE
Sbjct: 323 DCILYFSRADWYKIKYLI--DQKPKKSERDIAMTKLQEMIDYCE 364
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 218/416 (52%), Gaps = 59/416 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ +K ++FG F+ Q +AI LL D F+ MPTG G + + +
Sbjct: 17 EMRSKFGSVFGLKQFRLN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPAVVSE 70
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFR-----DDKTSIVTGRSDLYQLELIVSGQTKT 149
G + ISP+ S Y + + D + ++G SD +
Sbjct: 71 GVTVV-----------ISPLKSLIYDQVQKLGSLDVPANHLSGDSDDF------------ 107
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEW 207
++ +LR +PR++LLYVTPE+ V+ S L L L +L+ V+DEAHCVS+W
Sbjct: 108 ---SVYSDLRSTQPRLRLLYVTPEK-VSASGRLLDALSRLHANGRLSRFVIDEAHCVSQW 163
Query: 208 GHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y++L LR+ F+G +P++ALTATA P V+ DI+ L P K F S R
Sbjct: 164 GHDFRPDYKKLSVLREKFSG--VPMMALTATATPRVRTDILHQLGMRDP-KWFLQSFNRP 220
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL Y++ L +E +E GK A GIIYC +R+ DLA+ L +
Sbjct: 221 NLRYEI---RLKSGKVGTAREVLEVVEGK--FARQSGIIYCFSRKECDDLAEELSKNGVP 275
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ +R+ VQ+ ++ ++ V+ ATI+FGMG+D+ +VRFVVH+ +P S+ +YQ
Sbjct: 276 AVAYHAGLDDPKRNAVQQRWIDDKVRVVCATIAFGMGVDKPDVRFVVHYTLPKSMEGFYQ 335
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
ESGRAGRDG + C +++S + + +++ D ++ + N M+ +CE
Sbjct: 336 ESGRAGRDGRPASCLLFYSFADVQRIRRMVEMDKASNYAAKQTHLSNLWHMVNFCE 391
>gi|120434956|ref|YP_860642.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
gi|117577106|emb|CAL65575.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
Length = 732
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 208/383 (54%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++E +L +LK FGF FK LQ++ I I+ D FV MPTG G + +
Sbjct: 3 LTEIDLHKELKRYFGFSQFKG-LQEEVITSIV-NGKDTFVVMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
I G + +SP+++ ++ +I + S+ ++ S KTE
Sbjct: 57 LISDGTAIV-----------VSPLIA----LMKNQVDAIRSISSEHGVAHVLNSSLNKTE 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K + +++ KLLYV PE E + L++ +A++ VDEAHC+SEWGHD
Sbjct: 102 VKQVKDDIS--NGICKLLYVAPESLTKEDYVDFLKN----QTIAFLAVDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR L + + G++IP+I LTATA P V++DI+ L K FK S R NL+Y
Sbjct: 156 FRPEYRNLRNILKRIGDNIPVIGLTATATPKVQEDILKNLGITDA-KTFKASFNRPNLYY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNK 326
+V K+ A + F+++ GK GIIYC +R+ +LA L+ + V
Sbjct: 215 EV--RPKTKNIEADITRFVKQNDGK------SGIIYCLSRKKVEELAQTLQVNGIKAVPY 266
Query: 327 H------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
H +RS+ Q+ F+ +I+V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GR
Sbjct: 267 HAGLDAKKRSKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 327 AGRDGGEGHCLAFYSYKDIEKLE 349
>gi|402830902|ref|ZP_10879596.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
gi|402283336|gb|EJU31854.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
Length = 729
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 207/380 (54%), Gaps = 48/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK++FGF +FK + Q+ IR I+ H FV MPTG G + + +
Sbjct: 7 DLQKALKSIFGFSAFKGK-QEDIIRSIMEGNH-TFVLMPTGG----GKSLCYQLPALLKE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + ISP+++ ++ +V G S ++ ++ S TK E +
Sbjct: 61 GTAIV-----------ISPLIA-----LMKNQVDVVRGISGTDKIAHVLNSSLTKGEIRT 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++E++R KLLYV PE + + L+ + ++++ VDEAHC+SEWGHDFRP
Sbjct: 105 VMEDIR--NGDTKLLYVAPESLTKDEYADFLRTI----NISFVAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR + + + G IPIIALTATA V++DI+ L + VFK+S R NL+Y+V
Sbjct: 159 EYRNIKTIIERLGEGIPIIALTATATTKVQEDILKNLGIPQA-NVFKSSFNRPNLYYEV- 216
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + + F+++ G+ GIIYC +R+ +LA L+
Sbjct: 217 -RPKTKNINSDIIRFVKQRPGQ------SGIIYCLSRKSVEELAQTLQVNGITAIPYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ E+ V+ ATI+FGMGID+ +VRFV+H+ +P SI +YYQE+GRAGR
Sbjct: 270 LDAKTRAKHQDMFLMEEVEVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + YC ++ + LE
Sbjct: 330 DGGEGYCLAFYCYKDIEKLE 349
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 153/437 (35%), Positives = 223/437 (51%), Gaps = 49/437 (11%)
Query: 11 SAVGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFV 70
S V SS + D + +++ L+ +F F+ + Q ++I + L + D F+
Sbjct: 7 STVALSSKIPNTIYDTRQTFPWTKQVFKVLQEVFHLTDFR-QNQLESI-NATLNSIDCFI 64
Query: 71 SMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV 130
MPTG +S P G ISP+LS +D + +V
Sbjct: 65 LMPTGG---------GKSLCYQLPAC--CTTGKTTGLTVVISPLLS----LIQDQVSRLV 109
Query: 131 TGRSDLYQLELIVSGQTKTENKA-ILEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLV 188
L L + +S E+K +ELR K++YVTPE + + F L L
Sbjct: 110 ----QLNILAIAISSDMSAEDKRWAYDELRKEPLPPKMIYVTPELVMRSGQFKTALNDLF 165
Query: 189 RYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDII 247
R +LA VVDEAHCVS+WGHDFRP Y+ L LR Q+ ++PIIALTATA VK DII
Sbjct: 166 RRGRLARFVVDEAHCVSQWGHDFRPDYKELSTLRVQYP--TVPIIALTATANDKVKMDII 223
Query: 248 SVLKFNKPYKVFKTSTFRSNLFYDVIFDD--LLKDSYAHVKEFIEKCLGKDNKANNCGII 305
VL + K F+ S RSNL YDV D L D A +K F N GII
Sbjct: 224 KVLNIPQCAK-FQQSFNRSNLRYDVRKKDKGLDADITAFIKTFY---------PNASGII 273
Query: 306 YCRTREHTTDLADALRR----------KVNKHERSRVQESFMRGEINVITATISFGMGID 355
YC +R+ + L + ++K +RSR+Q ++ +++I ATI+FGMGID
Sbjct: 274 YCSSRKACEATSAKLCKLGIKAAFYHAGLDKEDRSRIQTAWATNSVHIIVATIAFGMGID 333
Query: 356 RQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ +VRFV+H+ +P S+ YYQE+GRAGRDG S C +Y++ K +++++I+ + E
Sbjct: 334 KGDVRFVIHYSIPQSLEGYYQETGRAGRDGKDSMCILYYAYKDKSTIDFLIE-NGEGNYE 392
Query: 416 QLELKFKNYLSMLEYCE 432
Q E + N ++ YCE
Sbjct: 393 QKERQRNNLRQIISYCE 409
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 211/412 (51%), Gaps = 58/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FG+D+F+ +KA+ L DI MPTGA G + + + PG
Sbjct: 7 LEAALKHFFGYDNFR--HGQKAVITAALENRDILALMPTGA----GKSLCFQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT--GRSDLYQLELIVSGQTKTENKA 153
+ ISP+++ D+ +T G + + Q ++ +A
Sbjct: 61 LTVV-----------ISPLIA-----LMQDQVDALTDNGIGATFLNSTLNLDQARSRIQA 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I IKLLYV PER E F LL + + L VVDEAHCVSEWGHDFRP
Sbjct: 105 IF------NGNIKLLYVAPERLFNEGFQQLLTDVDQTIGLTGFVVDEAHCVSEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDV 272
YR+L +R+ + P A TATA V++DII L P F ++F R NL+Y+V
Sbjct: 159 EYRQLSRIRRRYPRT-PCQAFTATATQRVREDIIDQLALQNP--SFHCTSFNRPNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ ++ SY + ++ + G+ GIIYC +R+ +LAD L++
Sbjct: 216 L--PKVRKSYTQLLCYVRQRRGQP------GIIYCSSRKKVDELADRLKQDGVKALPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ R+ QE F+R ++ V+ AT++FGMGI++ +VRFVVH+ +P+++ YYQESGRAG
Sbjct: 268 GLADRLRADYQEQFIRDDVPVMVATVAFGMGINKPDVRFVVHYDLPTNLERYYQESGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKREQLELKFKNYLSMLEYCE 432
RDG ++C +++ K EY I K D KR + ++ M++Y E
Sbjct: 328 RDGEPAHCTLFYRAGDIKRAEYFIELKEDEQEKR----IAYQQLQKMIDYAE 375
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 211/405 (52%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + I PG +
Sbjct: 675 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACIAPGVTIV---- 724
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 725 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 766
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L + LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 767 KKDPIIKLLYVTPEKVCASNRLISTLENLYQRTLLARFVIDEAHCVSQWGHDFRQDYKRM 826
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ +P++ALTATA P V++DI++ LK KP +VF S R NL Y V+
Sbjct: 827 NMLRQ-KFPLVPVMALTATANPRVQKDILTQLKILKP-QVFSMSFNRHNLKYYVLPKKPK 884
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +A+ L++ ++
Sbjct: 885 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMAETLKKNGLAALAYHAGLSDCA 938
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI AT++FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 939 RDEVQHKWINQDGCQVICATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I T+ + E F N SM+ YCE
Sbjct: 999 SHCLLFYTYHDVTRLKRLILTEKDGNQHTKETHFNNLYSMVHYCE 1043
>gi|221040662|dbj|BAH12008.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 142/394 (36%), Positives = 203/394 (51%), Gaps = 53/394 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 316 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTVV---- 365
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 366 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLS 407
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 408 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 467
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 468 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 525
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHERSRVQESFMR 338
K ++ + E+I K D+ GIIYC +R +AD L++ +N+
Sbjct: 526 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQKWINQ------------ 567
Query: 339 GEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHS 398
VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG S+C ++++ H
Sbjct: 568 DGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHD 627
Query: 399 KKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
L+ +I + E F N SM+ YCE
Sbjct: 628 VTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 661
>gi|110636721|ref|YP_676928.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
Length = 725
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 216/395 (54%), Gaps = 50/395 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
++ E+ KLK++FG+D F+ E Q++ I ++ L D FV MPTGA + + A S
Sbjct: 5 TDVEVINKLKSVFGYDRFRGE-QEEIINNV-LSGKDTFVIMPTGAGKSLCYQLPAISL-- 60
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
PG + ISP+++ ++ + D+ + + + + S TK E
Sbjct: 61 --PGVAIV-----------ISPLIA--LMKNQVDQLNAFGVNA-----QFLNSTLTKAEI 100
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +E + IKLLYV PE E L+ ++++ +DEAHC+SEWGHDF
Sbjct: 101 NRVKKE--TLNGEIKLLYVAPESLTKEDNILFLKKAA----ISFVAIDEAHCISEWGHDF 154
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ + + N+IPIIALTATA P V+ DI L+ + +FK+S R NLFY+
Sbjct: 155 RPEYRKIHSIIESINNNIPIIALTATATPKVQLDIQKNLQMDDAV-LFKSSFNRENLFYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH 327
V D+ + +FI+ G+ GIIYC +R+ ++A+ LR + + H
Sbjct: 214 V---RPKGDTKKKLIKFIKARKGQ------SGIIYCLSRKKVEEIAELLRVNDVKALPYH 264
Query: 328 E------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
R Q++F+ + +VI ATI+FGMGID+ +VRFVVH+ P S+ YYQE+GRA
Sbjct: 265 AGLEPAVRMGNQDAFLNEDADVIVATIAFGMGIDKPDVRFVVHYDTPKSLEGYYQETGRA 324
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
GRDG + +C +++S + LE K T T+RE
Sbjct: 325 GRDGNEGHCLMFYSMNDIIKLEKFNKDKTVTEREN 359
>gi|225010696|ref|ZP_03701166.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
gi|225005249|gb|EEG43201.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
Length = 647
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 206/384 (53%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++++ +L A LK FGF FK Q+ I+++L + H FV MPTG G + +
Sbjct: 2 EMNDYDLRAALKQYFGFSEFKGR-QEAVIKNVLAKKHS-FVIMPTGG----GKSMCYQLP 55
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + +SP+++ ++ + D V+ + ++ S TKT
Sbjct: 56 ALLQEGTAIV-----------VSPLIA--LMKNQVDAIRGVSANPGVAH--VLNSSLTKT 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E K + + +V KLLYV PE E L + ++++ VDEAHC+SEWGH
Sbjct: 101 EIKQVKSD--VVNGITKLLYVAPESLTKEENVAFLNTVT----VSFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + G +IPII LTATA P V++DII L VFK+S R NLF
Sbjct: 155 DFRPEYRNLQRIIDRVGANIPIIGLTATATPKVQEDIIKNLGITDA-TVFKSSFNRPNLF 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-------- 321
Y+V ++ A + F+++ +GK GIIYC +R+ +LA L+
Sbjct: 214 YEV--RPKTQNVEADIIRFVKQHVGK------SGIIYCLSRKKVEELAQILQVNGVSAVP 265
Query: 322 --RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ RS+ Q+ F+ E++V+ ATI+FGMGID+ +VR+V+H +P SI +YYQE+G
Sbjct: 266 YHAGFDTKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPDVRYVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 217/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ I++IL + D V MPTG G + + + G +
Sbjct: 5 LKNYFGYDSFR-PLQQDIIQNILAQ-KDTLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +TEN + E
Sbjct: 59 -----------VSPLISLMKDQVESLQANGIAARA-------LNSSNNETENINLRREC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PER + E+ ++LL+ + +++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 100 -LQGKIKLLYISPERLLIET-NFLLKDI----QISLFAIDEAHCISQWGHDFRPEYTQLK 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PI+ALTATA+ ++DI+ L P K+F +S R NL +V
Sbjct: 154 VLRNQFP--KVPIVALTATADKITRKDIVQQLALKDP-KIFISSFDRPNLSLEVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD + EFIEK N CGIIYC +R T ++A L ++ ++
Sbjct: 211 KDKMRTILEFIEK------HKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDM 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG++S
Sbjct: 265 RDKAQNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMES 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V+ + +T+ Q E+ + M +Y E
Sbjct: 325 DTLLFYSLG-----DLVMLSKFATESSQQEINLEKLHRMQQYAE 363
>gi|312091032|ref|XP_003146836.1| RecQ helicase [Loa loa]
Length = 970
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 216/415 (52%), Gaps = 53/415 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ LK+ FGF+ F+ QK AI LL +D F+ MPTGA G + + +
Sbjct: 278 EMYRVLKSRFGFNQFR-HRQKHAIIAALL-GYDCFILMPTGA----GKSLCYQLPAVLSE 331
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTE 150
G + ISP+ K+ I + + +LE+ + S ++ E
Sbjct: 332 GVTVV-----------ISPL-----------KSLIEDQKMKMKELEICCYALTSELSQAE 369
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ I L P+IKLLYVTPE+ A +E + + L R L VVDEAHCVS+WGH
Sbjct: 370 SDRIYGMLNENSPKIKLLYVTPEKIAASEKLNNVFHSLHRRGLLTRFVVDEAHCVSQWGH 429
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y +L LR+ FT +P++ALTATA P + D L + K+F +S R+NL
Sbjct: 430 DFRPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDTRVHLAIQQS-KLFISSFVRTNL 488
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
YDVI K + +K + K+ GI+YC +R+ +A L
Sbjct: 489 KYDVI----AKGPRSLLKVMDRMKILYPGKS---GIVYCLSRKDCESVAKMLESHSMSSE 541
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R VQ ++ +NVI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+
Sbjct: 542 VYHAGLSDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVRFVIHFSIPKSIEGYYQET 601
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDGL SYC I +S + + +I+ + +T+ + + + L ++ YCE
Sbjct: 602 GRAGRDGLNSYCAILYSYNDSVRIRKMIEGENNTQGVRT-MHLSSVLEIVAYCEN 655
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 210/412 (50%), Gaps = 52/412 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
+++ K FG F+ QK+AI LL +D FV MPTG SL + + S+
Sbjct: 556 KDMHEKFHNFFGLTEFRHN-QKQAINAALL-NNDCFVLMPTGGGKSLCYQLPAICSK--- 610
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+ S Y + K+ + + + ++ ++
Sbjct: 611 --GVTVV-----------VSPLKSLIYDQVTKLKSMGIPATAMMSEVS----------DR 647
Query: 153 AILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ E+LR +P +KLLYVTPE+ A + + L R N+LA V+DEAHCVS+WGHDF
Sbjct: 648 EVYEDLRRAEPLLKLLYVTPEKLAASNLLKNTFEKLHRRNQLARFVIDEAHCVSQWGHDF 707
Query: 212 RPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
R Y +LG+LRQ F G +PI+ALTATA PSV++DI+ L +P K F S R NL Y
Sbjct: 708 RVDYHKLGQLRQTFPG--VPIMALTATASPSVRKDILKQLLMKEP-KWFLQSFNRPNLRY 764
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKA-NNCGIIYCRTREHTTDLADALRRK------ 323
++ H+ + I NK GI+YC +R+ A L
Sbjct: 765 QIV-KYFSGSPVTHIIKLIS------NKYFEKSGIVYCLSRKDCDQTAAKLESAGISAVS 817
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+N ERS +Q+ ++ G +V+ ATI+FGMGID+ NVRFV H G+P S+ YYQE+G
Sbjct: 818 YHAGMNDAERSSIQDMWINGRKHVVCATIAFGMGIDKANVRFVFHTGLPKSVEGYYQETG 877
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
RAGRDGL S C +++ + +I T ++ N M+ +C
Sbjct: 878 RAGRDGLPSDCVLFYRFADYIRWQKLITGGAETTASSRKIHLANLWHMVRFC 929
>gi|428771662|ref|YP_007163452.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
gi|428685941|gb|AFZ55408.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
Length = 707
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 219/424 (51%), Gaps = 66/424 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARSRVR 91
L LK FG+DSF+ E Q++ I++ L D+ + MPTG SL + +++ +
Sbjct: 4 LRQSLKKYFGYDSFR-EGQEEIIQNAL-NNRDLLIIMPTGGGKSLCFQLPALLKKGVTIV 61
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + + + + I + L F++ K ++ +LI+SG
Sbjct: 62 ISPLISLMQDQVMSLHDNGIGATFINSTLDFQEIK----------HREQLILSG------ 105
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+IKLLY+ PER ++E F L + + N +A +DEAHC+SEWGHDF
Sbjct: 106 ------------KIKLLYLAPERLISEKFQSFLNTVAKTNAIASFAIDEAHCISEWGHDF 153
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
R YR+L +LRQ IPI ALTATA P V+QDII L+ P + + S R NL+Y+
Sbjct: 154 RLEYRQLRQLRQ-RFPQIPITALTATATPRVQQDIIQQLRLRNPI-IRRFSFNRPNLYYE 211
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V + K +Y + + I N GIIYC R+ T DLA LR+
Sbjct: 212 VRPRE--KRNYHQILQLI-------NSLEGSGIIYCLARKTTEDLAYRLRQDNISALPYH 262
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ RS Q+ F+R + ++ AT++FGMGI++ +VRFV+H +P +I +YYQESGRA
Sbjct: 263 GGLTDEMRSHHQDCFIRDDARIMVATVAFGMGINKPDVRFVIHHDLPRNIESYYQESGRA 322
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIK-----TDTSTKREQLELKFKNYLSMLEYCEQ--- 433
GRDG + C + ++ + + Y IK + REQL+ K + Y + YC +
Sbjct: 323 GRDGEPAKCILLYNPSDEYKINYFIKQKENINEQKQAREQLK-KVQEY-AETNYCRRIVQ 380
Query: 434 -GYF 436
GYF
Sbjct: 381 LGYF 384
>gi|340348782|ref|ZP_08671813.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
gi|339613206|gb|EGQ17991.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
Length = 727
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 202/385 (52%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK Q+ IR++L +D FV MPTG + S++ +
Sbjct: 4 EVNLTEKLKHFFGFDKFKG-AQEAIIRNVL-AGNDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N V NG + YL KT I ++D I +G+TK
Sbjct: 62 AIVISPLIALMKN-QVDVINGISEEDGVAHYLNSSLKKTEIDNVKAD------IQNGKTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E + + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEESIEFFKTV----KVSFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + PIIALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRQAIDQIGKA-PIIALTATATDKVRTDIVKSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V +D+ + +FI++ LGK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRPKKNEEDTNRQIIKFIKQNLGK------SGIIYCLSRKKVEELAAVLQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S++ K LE
Sbjct: 325 GRAGRDGEEGKCIVFYSKNDLKKLE 349
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 144/409 (35%), Positives = 211/409 (51%), Gaps = 56/409 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 85 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 134
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 135 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 176
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 177 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 236
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 237 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILQP-QVFSMSFNRHNLKYYVLPKKPK 294
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 295 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 348
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIP----AYYQESGRAGR 383
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+P YYQESGRAGR
Sbjct: 349 RDEVQHKWVNQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVPKSVEGYYQESGRAGR 408
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 409 DGETSHCLLFYTYHDVTRLKRLILMEKDGNHHTRETHFNNLYSMVHYCE 457
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/405 (36%), Positives = 210/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG D I
Sbjct: 663 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPG-DTI---- 711
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E I +L
Sbjct: 712 ------EISPL-----------RSLIVDPVQKLTSLDIPATYLTGDKTDSETTNIYLQLS 754
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 755 KKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 814
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 815 NILRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 872
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R ++
Sbjct: 873 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCE 1031
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 211/417 (50%), Gaps = 57/417 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ K FG F+ Q AI ++L HD FV MPTG G + + +
Sbjct: 513 QEMLHVFKTRFGLHQFRPN-QLPAINAVIL-GHDCFVLMPTGG----GKSLCYQLPALLA 566
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLE---LIVSGQTKTE 150
PG + ISP+ ++ IV L L+ L ++G E
Sbjct: 567 PGVTIV-----------ISPL-----------RSLIVDQTQKLLSLDISALYLTGDLSNE 604
Query: 151 N-KAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +L + +KLLYVTPE+ + + F L L R KLA V+DE HCVS+WG
Sbjct: 605 QMNGVYRKLYNTESNLKLLYVTPEKISKSTKFCDSLLRLYRDGKLARFVIDEVHCVSQWG 664
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y++L LR+ F G +PIIALTATA V+ DI+ L P K F +S R N
Sbjct: 665 HDFRPDYKKLSMLRERFPG--VPIIALTATATQRVRSDILHQLHLQSP-KWFISSFNRPN 721
Query: 268 LFYDVIFDDLLKDSYAH--VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
L Y V L K Y + V + I K N+CGIIYC +R +LA+AL+++
Sbjct: 722 LRYTVT---LRKSKYPYQLVLDLI-----KTKFPNDCGIIYCFSRNDCDNLAEALKKEGI 773
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R+ Q ++ ++ VI ATI+FGMGID+ NVR+V+H MP SI YY
Sbjct: 774 QALSYHAGLDDKVRTDRQIQWVSEKVKVICATIAFGMGIDKPNVRYVIHATMPKSIEGYY 833
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QESGRAGRDG + C + ++ +++++ +E L+ N ++ +CE
Sbjct: 834 QESGRAGRDGEPADCILLYNYSDMHRYRTMMESNEYANKEALKTHLDNLFKIVHFCE 890
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/396 (34%), Positives = 206/396 (52%), Gaps = 50/396 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG++SF+ ++ H+ R D MPTG G + + + G
Sbjct: 34 LQQALKQYFGYESFRAGQREIIDAHLAGR--DTLAIMPTGG----GKSICFQLPALLKTG 87
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG-QTKTENKAI 154
+ +SP+++ +D T++ L +SG +T ++AI
Sbjct: 88 VTIV-----------VSPLIALM----QDQVTALKENGIGATFLNSTLSGRETNQRSQAI 132
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L IKL+YV PER E F L + +A +DEAHCVSEWGHDFRP
Sbjct: 133 L------NGAIKLIYVAPERLFAEQFIEFLNIVKNKIGIAGFAIDEAHCVSEWGHDFRPE 186
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L LRQF + +P+I LTATA V++DII L +PY V S R NL+Y+V+
Sbjct: 187 YRQLSRLRQFYPD-VPVIGLTATATERVREDIIQQLDLQQPY-VHVASFNRDNLYYEVVP 244
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ SY ++ + I++ G GI+YC +R+ ++A+ LR +
Sbjct: 245 KQGTEQSYVNLLQQIKRMQG-------SGIVYCLSRKRVNEIAERLREDGIAAIPYHAGL 297
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ ER Q ++R ++ V+ ATI+FGMGI++ +VRFV+H+ +P +I YYQESGRAGRD
Sbjct: 298 SAKEREENQTRWIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPKNIEGYYQESGRAGRD 357
Query: 385 GLQSYCRIYHSEHSKKSLEYVI--KTDTSTKREQLE 418
G S+C ++ ++++Y+I K D T E LE
Sbjct: 358 GEDSHCTLFLGYQDLETIKYLIAQKVDPHTN-EPLE 392
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 208/416 (50%), Gaps = 56/416 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG SF+ Q +AI +L D F+ MPTG G + + +
Sbjct: 600 REMLKIFRQKFGLYSFRPN-QLQAINAAIL-GFDCFILMPTGG----GKSLCYQLPALLL 653
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ K+ I+ L L++ + G T +
Sbjct: 654 PGVTIV-----------ISPL-----------KSLILDQVQKLTSLDIPATHMSGGITDS 691
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I EL P +KLLYVTPE+ + + F +L L LA V+DEAHCVS+WG
Sbjct: 692 QALGIYRELSKKDPALKLLYVTPEKISASPKFCNILSSLYNRRLLARFVIDEAHCVSQWG 751
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y+RL LR+ +P+I LTATA P V+ DI+ L+ P K F +S R NL
Sbjct: 752 HDFRPDYKRLNCLRE-NYPKVPVIVLTATATPRVRSDILHQLRITTP-KWFMSSFNRPNL 809
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK--- 323
Y +I K ++ +G K N+CGI+YC +R+ D A +R+
Sbjct: 810 RYSII--------AKKGKNCSDEVIGMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNSIK 861
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ + RS +Q ++ EI V+ ATI+FGMGID+ NVRFV+H +P SI YYQ
Sbjct: 862 ALSYHAGLTDNNRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQ 921
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
ESGRAGRDG + C ++++ + +I+ D S ++ N M+ +CE
Sbjct: 922 ESGRAGRDGENADCILFYNYTDMHRIRKMIELDNSNPT-IIKTHIDNLFKMVSFCE 976
>gi|158338684|ref|YP_001519861.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
gi|158308925|gb|ABW30542.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
Length = 736
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 201/395 (50%), Gaps = 60/395 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ + ++ + L+ D+ V MPTG G
Sbjct: 15 LEEALKHYFGYDQFR--VGQRPVIEAALQRQDLMVVMPTG-------------------G 53
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ++ ++S +D T++ +D+ L S T + I
Sbjct: 54 GKSLCFQLPGLLLPGLTVVISPLIALMQDQVTTLQV--NDIPATFLNSSIDAATARQRIS 111
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E + +IKLLYV PER + ESF LL + LA VDEAHCVSEWGHDFRP Y
Sbjct: 112 E---IYSGKIKLLYVAPERLLNESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEY 168
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--- 272
RRL E+RQ +P+ ALTATA V+QDII L+ +P+ V S R NL+Y+V
Sbjct: 169 RRLAEVRQ-RYTQVPVYALTATATERVRQDIIQQLQLRQPF-VHVASFNRPNLYYEVRPK 226
Query: 273 ---IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
++ DL ++ H G+D+ GI+YC +R +++ L+
Sbjct: 227 SRQVYADLYREIRQH---------GQDS-----GIVYCLSRREVNEISARLQADGISALP 272
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R+ QE F+R ++ V+ AT++FGMGID+ +VRFV+H+ +P +I YYQESG
Sbjct: 273 YHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRNIEGYYQESG 332
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVI--KTDTST 412
RAGRDG S C ++ S ++E++I K D T
Sbjct: 333 RAGRDGEPSKCLLFFSTKDIHTIEWLIERKADPET 367
>gi|420149707|ref|ZP_14656877.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753188|gb|EJF36768.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 732
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K+++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 5 KMTKDDLHNALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSL 53
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G ISP+++ ++ + D ++ + + + S TK
Sbjct: 54 CYQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKN 103
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGH
Sbjct: 104 EIREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGH 157
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+
Sbjct: 158 DFRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEA-NVFKSSFNRPNLY 216
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 217 YEV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVP 268
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 269 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 328
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 329 RAGRDGGEGHCLAFYSYKDVEKLE 352
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 213/412 (51%), Gaps = 48/412 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL + FG F+ E Q +AI LL D F+ MPTG +S
Sbjct: 767 RELHKVFRKTFGLHQFR-ENQLEAINAALL-GEDCFILMPTGG---------GKSLTYQL 815
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ-TKTENK 152
PG +L V ISP+ S +D +V+ L E +SG+
Sbjct: 816 PG---VLTKGVTI---VISPLKS----LIQDQVQRLVS----LEIQETHLSGEMAGAAAD 861
Query: 153 AILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
I +L + P +K+LYVTPE+ + ++ ++HL L+ V+DEAHCVS+WGHDF
Sbjct: 862 GIYRQLCMRDPVVKMLYVTPEKISASQKLLSTMEHLYTRGLLSRFVIDEAHCVSQWGHDF 921
Query: 212 RPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
RP Y+RL +LR+ F G +P++ALTATA P VK DI+ LK KP +V +S RSNL +
Sbjct: 922 RPDYKRLCKLREKFPG--VPMMALTATATPRVKTDILHALKMKKP-QVLTSSFDRSNLMF 978
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK---- 326
V K + + E I K + K + GI+YC +R +AD L K
Sbjct: 979 RV-----EKKQPSKMIENITKLINSQFKGKS-GIVYCLSRNECEKVADDLSNAGIKASPY 1032
Query: 327 ------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ERS VQ ++ G+ V+ ATI+FGMGID+ +VRFV+H+ MP SI YYQE+GR
Sbjct: 1033 HAGQSDKERSTVQTRWINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEGYYQEAGR 1092
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG ++C +Y S L +I+ + ++ N M++YC+
Sbjct: 1093 AGRDGGLAHCVLYFSYQDVTRLRRMIEKN-GDNYNATKVHVDNLYGMVQYCD 1143
>gi|340621987|ref|YP_004740439.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
gi|339902253|gb|AEK23332.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
Length = 729
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 209/384 (54%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K S+ +L + LK FGFD+FK + Q++ +R ++ R + FV MPTG G + +
Sbjct: 2 KTSKNDLQSALKHYFGFDTFKGQ-QEEIVRSVINR-QNTFVIMPTGG----GKSLCYQLP 55
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + ISP+++ ++ + D ++ + + + S K
Sbjct: 56 AMVSKGTAIV-----------ISPLIA--LMKNQVDAMRGISSTDSVAHV--LNSSLNKG 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++R + KLLYV PE + + L+ + ++++ VDEAHC+SEWGH
Sbjct: 101 EIREVMEDIR--SKKTKLLYVAPESLTKDEYANFLKTI----DISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + G IP++ALTATA P V+ DI+ L + VFK S R NL+
Sbjct: 155 DFRPEYRNIKTIIDRLGEGIPVVALTATATPKVQDDILKNLGMAEA-NVFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ + GIIYC +R+ +L+ L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQ------HSKKSGIIYCLSRKKVEELSQTLQVNGITAVP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|315223920|ref|ZP_07865765.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
gi|314946092|gb|EFS98096.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
Length = 729
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 212/384 (55%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++++ +L + LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 2 EMTKDDLHSALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G ISP+++ ++ + D ++ + + + S TK
Sbjct: 51 CYQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKN 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGH
Sbjct: 101 EIREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+
Sbjct: 155 DFRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEA-NVFKSSFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 209/416 (50%), Gaps = 45/416 (10%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
G +EL + LK+ FGF+ F+ QK+ I L+ +D FV MPTGA G + +
Sbjct: 262 GADMNEELYSTLKSKFGFNQFR-HRQKQCILSTLM-GNDTFVLMPTGA----GKSLCYQL 315
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
I PG + +SP+ S D K + + E + + +
Sbjct: 316 PAVILPGVTVV-----------VSPLRS----LIEDQKMKM---KELGIGCEALTADLSA 357
Query: 149 TENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
+ I +L P IKLLYVTPE+ + + + L R LA V+DEAHCVS+W
Sbjct: 358 GAQEDIYSDLTSENPTIKLLYVTPEKISASGRLISVFYTLHRRGLLARFVIDEAHCVSQW 417
Query: 208 GHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y +L LR+ F +PIIALTATA P + D LK K+F +S R
Sbjct: 418 GHDFRPDYTKLSTLREKFHNPPVPIIALTATATPKIVTDARYNLKMQNS-KLFISSFVRD 476
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL---------- 316
NL YD L+ + + +EK K GI+YC +R+ +
Sbjct: 477 NLKYD-----LIPKAAKSLINVVEKM--KQLYPGKSGIVYCLSRKECETVQMMLTKAGLS 529
Query: 317 ADALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
A+ +N R VQ+ ++ + +VI ATI+FGMGID+ +VRFV+H+ +P SI YYQ
Sbjct: 530 AEVYHAGLNDGLRVSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 589
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG+ SYC + +S H L +I+ +T + + N L ++ YCE
Sbjct: 590 ETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVR-SMHLNNVLQVVAYCE 644
>gi|229496706|ref|ZP_04390420.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
gi|229316603|gb|EEN82522.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
Length = 724
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 211/402 (52%), Gaps = 50/402 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FGF++FK ++ I LL D FV MPTG G + + I G
Sbjct: 5 LLAHLKEHFGFETFKN--HQEEIICALLEGKDCFVLMPTGG----GKSMCYQLPALISEG 58
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I ISP+++ ++ ++ + +D + S K++ +
Sbjct: 59 TAII-----------ISPLIA----LMKNQVDALRSYCNDDCVVHFFNSSLRKSQMDLVR 103
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ + R KLLYVTPE E LQ + +++ +DEAHC+SEWGHDFRP Y
Sbjct: 104 QDT--LAGRTKLLYVTPECLTKEENQAFLQSI----SISFFAIDEAHCISEWGHDFRPEY 157
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ + G PIIALTATA P V+ DI+ L+ + + +F++S R NLFY ++
Sbjct: 158 RKIRPMIDVIGRR-PIIALTATATPKVEHDILRTLQIPQAH-IFRSSFNRPNLFYSILPK 215
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKVN 325
+ +D ++ F+ L K+ GI+YC +R T A LR ++
Sbjct: 216 N--EDVDRNIVRFV---LSNPQKS---GIVYCMSRSKVTTFAKILRINGIRALPYHAGLD 267
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ER+ Q++F+ E VI ATI+FGMGID+ +VRFV+H+ MP S+ YYQE+GRAGRDG
Sbjct: 268 AQERAANQDAFLSEECQVIVATIAFGMGIDKPDVRFVIHYDMPKSLEGYYQETGRAGRDG 327
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKRE---QLELKFKNY 424
+ C Y+S+ + LE ++ ++++RE QL + NY
Sbjct: 328 GEGVCIAYYSQSDMQRLEKFMQDKSNSEREIGKQLLAETSNY 369
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + G +
Sbjct: 675 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSSGVTIV---- 724
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 725 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 766
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFRP Y+R+
Sbjct: 767 KKDPIIKLLYVTPEKVCASNRLISTLENLYNRKLLARFVIDEAHCVSQWGHDFRPDYKRM 826
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 827 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFTMSFNRHNLKYYVLPKKPK 884
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 885 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 938
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 939 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 999 SQCLLFYTYHDVTRLKRLILMEKDGNHHTKETHFNNLYSMVHYCE 1043
>gi|393911582|gb|EJD76373.1| CBR-HIM-6 protein [Loa loa]
Length = 1044
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 216/415 (52%), Gaps = 53/415 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ LK+ FGF+ F+ QK AI LL +D F+ MPTGA G + + +
Sbjct: 278 EMYRVLKSRFGFNQFR-HRQKHAIIAALL-GYDCFILMPTGA----GKSLCYQLPAVLSE 331
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTE 150
G + ISP+ K+ I + + +LE+ + S ++ E
Sbjct: 332 GVTVV-----------ISPL-----------KSLIEDQKMKMKELEICCYALTSELSQAE 369
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ I L P+IKLLYVTPE+ A +E + + L R L VVDEAHCVS+WGH
Sbjct: 370 SDRIYGMLNENSPKIKLLYVTPEKIAASEKLNNVFHSLHRRGLLTRFVVDEAHCVSQWGH 429
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y +L LR+ FT +P++ALTATA P + D L + K+F +S R+NL
Sbjct: 430 DFRPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDTRVHLAIQQS-KLFISSFVRTNL 488
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
YDVI K + +K + K+ GI+YC +R+ +A L
Sbjct: 489 KYDVI----AKGPRSLLKVMDRMKILYPGKS---GIVYCLSRKDCESVAKMLESHSMSSE 541
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R VQ ++ +NVI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+
Sbjct: 542 VYHAGLSDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVRFVIHFSIPKSIEGYYQET 601
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDGL SYC I +S + + +I+ + +T+ + + + L ++ YCE
Sbjct: 602 GRAGRDGLNSYCAILYSYNDSVRIRKMIEGENNTQGVRT-MHLSSVLEIVAYCEN 655
>gi|386320424|ref|YP_006016586.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|416111385|ref|ZP_11592598.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|442315223|ref|YP_007356526.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
gi|315022665|gb|EFT35690.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|325334967|gb|ADZ11241.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|441484146|gb|AGC40832.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
Length = 734
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 204/391 (52%), Gaps = 50/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGF +FK Q++AI LL DIFV MPTG G + + I G
Sbjct: 8 LAEELKKYFGFSTFKG--QQEAIISTLLGGKDIFVLMPTGG----GKSLCYQLPALISEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ V G S + ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSEEGVAHVLNSSLNKTQIKQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ R KLLYV PE + E + L L + N ++++ +DEAHC+SEWGHDFRP
Sbjct: 106 FSDIN--SGRTKLLYVAPESLIKEDY---LDFLKQAN-ISFVAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L + N +P+IALTATA P V+ DI L + VFK S R NLFY+V
Sbjct: 160 YRNLKGIIDKIAN-VPVIALTATATPKVQDDIQKTLGMSDAV-VFKESFNRPNLFYEV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRKVNK 326
D + +FI K GK GI+YC +R+ + A +AL
Sbjct: 216 -RPKVDVEKEIVKFINKNKGK------SGIVYCLSRKKVEEFAQTLQVNGINALPYHAGL 268
Query: 327 HERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+GRAGRD
Sbjct: 269 DQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
G + +C ++ + LE + + +++E
Sbjct: 329 GGEGHCLAFYDPKDIEKLEKFLAQKSVSEKE 359
>gi|440748399|ref|ZP_20927652.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
gi|436483223|gb|ELP39291.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
Length = 725
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 216/397 (54%), Gaps = 56/397 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLV----GSVVSARS 88
+Q + KLK +FGF++F+ Q+ + ++L+ + FV MPTGA + +VVS +
Sbjct: 2 DQNIKEKLKKIFGFNNFRGN-QEPIVGNVLI-GRNTFVIMPTGAGKSLCYQFPAVVSEGT 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N V N + +++++L +K+ I + + ++SG+TK
Sbjct: 60 AIVISPLIALMKN-QVDQLNAFG---VNAYFLNSTLNKSEITKVKKE------VLSGKTK 109
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE + L+ KL+++ +DEAHC+SEWG
Sbjct: 110 ------------------LLYVAPESLTKDENIAFLKEA----KLSFVAIDEAHCISEWG 147
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G +PI+ALTATA P V+QDI L+ + +FK+S R NL
Sbjct: 148 HDFRPEYRKIKSIIGQIGPELPIVALTATATPKVQQDIQRNLQMEEA-DIFKSSFNRPNL 206
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
FY+V + ++ + ++I+ GK GIIYC +R+ ++A+ L+
Sbjct: 207 FYEV-RPKVKNETKKAIIKYIKSQKGK------SGIIYCLSRKKVEEIAELLKVNGISAA 259
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+++ R + Q+ F+ EI+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+
Sbjct: 260 PYHAGLDQAVRIKNQDDFLNEEIDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQET 319
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRAGRDGL+ +C +++ LE K T+RE
Sbjct: 320 GRAGRDGLEGHCLMFYRYDDIIKLEKFNKDKPVTERE 356
>gi|404449892|ref|ZP_11014879.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
gi|403764371|gb|EJZ25272.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
Length = 726
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 219/417 (52%), Gaps = 50/417 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+Q + LK +FGF F+ ++ I +LR ++ FV MPTGA G + + I
Sbjct: 2 DQTVKENLKRIFGFSQFRG--NQEPIVDNVLRGNNTFVIMPTGA----GKSLCYQLPAVI 55
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ K + + + S KTE
Sbjct: 56 QDGTAIV-----------ISPLIALM-------KNQVDQLNAFGINAHFLNSTLNKTETN 97
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ +E+ + + KLLYV PE E L+ KL+++ +DEAHC+SEWGHDFR
Sbjct: 98 KVKKEV--LSGKTKLLYVAPESLTKEENVLFLKDA----KLSFVAIDEAHCISEWGHDFR 151
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ + G+++PI+ALTATA P V+QDI L+ + +FK+S R+NL+Y+V
Sbjct: 152 PEYRKIKTIIAQIGSNLPIVALTATATPKVQQDIQRNLQMEEA-DLFKSSFNRTNLYYEV 210
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ ++ + ++I+ GK GIIYC +R+ ++A+ L+
Sbjct: 211 -RPKVKNETKKQIIKYIKSQKGK------SGIIYCLSRKKVEEIANLLKVNGIKAAPYHA 263
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ++ R + Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 264 GLEQNVRVKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE--YCEQGYFL 437
RDGL+ +C +++ LE K T+RE ++ + + E C + + L
Sbjct: 324 RDGLEGHCLMFYKYDDIVKLEKFNKDKPVTERENAKILLQEMAAYAESSICRRKFLL 380
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 206/407 (50%), Gaps = 56/407 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI LL D F+ MPTG G + + I PG +
Sbjct: 83 FGLHHFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACISPGVSIV---- 132
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 133 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEAASIYLQLS 174
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 175 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 234
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK KP +VF S R NL YDV+
Sbjct: 235 NVLRQ-KFPSVPVMALTATANPRVQKDILTQLKILKP-QVFSMSFNRHNLKYDVLPKKPK 292
Query: 279 KDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K ++ CL + + + GIIYC +R +A LR+ ++
Sbjct: 293 KVAF--------DCLSWIRKHHPYDSGIIYCLSRRECDTMALTLRKDGLAALAYHAGLSD 344
Query: 327 HERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ YYQESGRAGRDG
Sbjct: 345 SARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDG 404
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S H L+ +I + + F N SM+ YCE
Sbjct: 405 EISHCLLFYSYHDVIRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCE 451
>gi|297570067|ref|YP_003691411.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
gi|296925982|gb|ADH86792.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
Length = 609
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/365 (37%), Positives = 194/365 (53%), Gaps = 53/365 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK +FGF SF+ Q++ I LL D FV MPTG + + A R P
Sbjct: 4 QIEQTLKDVFGFASFRP--QQREIIEDLLAGRDAFVLMPTGGGKSLCYQLPALHR----P 57
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP++S K + ++ + S E + +
Sbjct: 58 GVAIV-----------VSPLISLM-------KDQVDALKAQGIKAACYNSALEAQEARQV 99
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L RL + LLYV PER ++E F L+ L ++A +DEAHCVS+WGHDFRP
Sbjct: 100 LA--RLHGGELDLLYVAPERLMSEDFLGRLREL----QIALFAIDEAHCVSQWGHDFRPE 153
Query: 215 YRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y +LG LRQ F G IP+IALTATAEP ++DII+ L K + + TS R N+ Y V+
Sbjct: 154 YIQLGRLRQKFPG--IPLIALTATAEPHTRKDIIARLNLEKA-RCYLTSFDRPNIRYTVL 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + +F+ D + GIIYC +R+ L L+
Sbjct: 211 EK---KRPFNQLLDFL------DGRREEAGIIYCLSRKRVEQLTAKLQEAGFAAASYHAG 261
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ ERSRVQE+F+R ++ +I AT++FGMGID+ N+R+VVH +P +I YYQE+GRAGR
Sbjct: 262 LSGEERSRVQEAFLRDDLPLIVATVAFGMGIDKSNIRYVVHHDVPKNIEGYYQETGRAGR 321
Query: 384 DGLQS 388
DGL S
Sbjct: 322 DGLNS 326
>gi|420158748|ref|ZP_14665562.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
gi|394763235|gb|EJF45355.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
Length = 727
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 211/383 (55%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+++ +L + LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 1 MTKDDLHSALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSLC 49
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P +L G ISP+++ ++ + D ++ + + + S TK E
Sbjct: 50 YQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKNE 99
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGHD
Sbjct: 100 IREVMEDISAGK--TKLLYVAPESLIKEKYANFLKTV----PISFVAVDEAHCISEWGHD 153
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+Y
Sbjct: 154 FRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEA-NVFKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 213 EV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GR
Sbjct: 265 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 325 AGRDGGEGHCLAFYSYKDVEKLE 347
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/404 (34%), Positives = 216/404 (53%), Gaps = 55/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+D+F+ LQ+ I+ ++ D+FV MPTG + + A +
Sbjct: 5 LRKYFGYDTFR-PLQEDIIKDVIA-GKDVFVLMPTGGGKSICYQLPA-----------LL 51
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+NG +SP++S K + T R++ + + S + E+ I +EL
Sbjct: 52 MNGVTVV----VSPLISLM-------KDQVDTLRANGVEAAYLNSTLSYKESNQIKQELE 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
IKLLYV PER S LL + K+ +DE+HC+SEWGHDFRP YR+L
Sbjct: 101 --NNIIKLLYVAPERLTLSSTLTLLDRI----KVNLFAIDESHCISEWGHDFRPEYRKLS 154
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L++ + IPIIALTATA P V++D IS L + + S R NL Y V K
Sbjct: 155 ILKRKYPH-IPIIALTATATPKVRKDTISQLHI-EDCNTYVASFNRKNLLYQVRPK---K 209
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
++Y + EF+ K + + GIIYC++R+ +L LR+ ++ R
Sbjct: 210 ETYEQIVEFLRK------RKDKSGIIYCQSRKTVDELTGKLRKSGFNALPYHAGLSDAAR 263
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
SR Q+ F++ + +I ATI+FGMGID+ NVRFV+H+ +P ++ +YYQE+GR GRDGL+
Sbjct: 264 SRNQDIFIKDDAEIIVATIAFGMGIDKPNVRFVIHYDLPRNLESYYQETGRGGRDGLECE 323
Query: 390 CRIYHSEHSKKSLEYVI-KTDTSTKREQLELKFKNYLSMLEYCE 432
C ++ S K ++Y I + S +RE LK K +++YC+
Sbjct: 324 CILFFSRGDKYKIDYFIDQIAKSEEREAARLKLK---EVMDYCQ 364
>gi|345429420|ref|YP_004822538.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
gi|301155481|emb|CBW14947.1| ATP-dependent DNA helicase [Haemophilus parainfluenzae T3T1]
Length = 621
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 212/389 (54%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+++FG+ SF+ + Q++ I H L D V M TG G + + PG +
Sbjct: 22 LRSVFGYQSFR-KGQEEVI-HAALSGQDALVVMATGN----GKSLCYQIPALCFPGLTLV 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + E +
Sbjct: 76 -----------ISPLISLM-------KDQVDQLQANGIEADFLNSSQTPEQQQQV--ENK 115
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y ++++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 116 LISGQLKLLYVSPEKVMTNSFF----QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLG 171
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ N+ PI+ALTATA+ + +QDI++ LK + P+K + S R N+ Y L+
Sbjct: 172 GLKAAFPNA-PIMALTATADYATRQDILTHLKLDHPHK-YIGSFDRPNIRYT------LE 223
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ L + K+ GI+YC +R +A+ LR K + R
Sbjct: 224 EKFKPMEQLTRFVLAQKGKS---GIVYCNSRSKVERIAETLRNKGVSAAAYHAGMETALR 280
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R I V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 281 ERVQQDFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 340
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ + T + Q+E
Sbjct: 341 AVLFYELADYAWLQKILLEKSETPQRQIE 369
>gi|429753766|ref|ZP_19286544.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429171815|gb|EKY13407.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 729
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K+++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 2 KMTKNDLHNALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G ISP+++ ++ + D ++ + + + S TK
Sbjct: 51 CYQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKN 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGH
Sbjct: 101 EIREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+
Sbjct: 155 DFRPEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEA-NVFKSSFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|332882718|ref|ZP_08450329.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679220|gb|EGJ52206.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 729
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K+++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 2 KMTKNDLHDALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G ISP+++ ++ + D ++ + + + S TK
Sbjct: 51 CYQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKN 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++ + KLLYV PE + E + L+ + ++++ VDEAHC+SEWGH
Sbjct: 101 EIREVMEDIS--NGKTKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+
Sbjct: 155 DFRPEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEA-NVFKSSFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ K GIIYC +R+ DLA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQNTKK------SGIIYCLSRKKVEDLAQTLQVNGISAVP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|430812018|emb|CCJ30545.1| unnamed protein product [Pneumocystis jirovecii]
Length = 704
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 147/441 (33%), Positives = 220/441 (49%), Gaps = 64/441 (14%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S +++ L+ +FG F+ QK+AI LR DIF+ PTG + S+ +
Sbjct: 9 SSVDISFTLRKVFGKPDFR-GCQKEAI-ECALRGEDIFIIAPTG---MGKSLCYQLPAIV 63
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G + +SP+L+ +++ I+ ++ ++ T EN
Sbjct: 64 VDHGVTIV-----------VSPLLA-----LMNNQVDILCAKN---LPAATLNSTTSIEN 104
Query: 152 -KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K ILE+L P+++LLYVTPE TE+F L ++ ++ +L V+DEAHCVSEWGHD
Sbjct: 105 RKRILEDLACGHPQVRLLYVTPELLSTENFRNKLLNVYQHGELHRFVIDEAHCVSEWGHD 164
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKP--YKVFKTSTFRSNL 268
FR Y+ L LR+ IPI+ALTATA V+ DI +L P KVF R NL
Sbjct: 165 FRKDYKLLSFLRK-KYPKIPIMALTATATEKVRLDIAKILGLPAPPTLKVFIEPFSRKNL 223
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGK-------------DNKANN-------CGIIYCR 308
++V F KD Y ++FI + D N CGIIY +
Sbjct: 224 HFEVRFKSDGKDHYEDFRKFILSVYARKKKRLFLENKNFIDQNGGNYDIPVSICGIIYAK 283
Query: 309 TREHTTDLADALRRK-VNKHE---------RSRVQESFMRGEINVITATISFGMGIDRQN 358
R ++A+ L+ +N R + + + G+I++I ATI+FGMG+D+++
Sbjct: 284 KRGTCEEVAERLKNDGINAQSYHAGLSSTMRDKTMKLWYEGKIDIIVATIAFGMGVDKED 343
Query: 359 VRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
VRFVVHW M S+ AYYQE+GRAGRD S C +Y+S + Y++ + K+ + E
Sbjct: 344 VRFVVHWDMSKSMEAYYQEAGRAGRDNKTSRCILYYSREDRDKTRYILHQEKEQKKRKRE 403
Query: 419 -----LKFKNYLSML-EYCEQ 433
L N ML +YCE
Sbjct: 404 SEGNDLSNINSFEMLVKYCEN 424
>gi|313205605|ref|YP_004044782.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383484930|ref|YP_005393842.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312444921|gb|ADQ81276.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459615|gb|AFD55299.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 734
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 204/391 (52%), Gaps = 50/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGF +FK Q++AI LL D+FV MPTG G + + I G
Sbjct: 8 LAEELKKYFGFSTFKG--QQEAIISTLLGGKDVFVLMPTGG----GKSLCYQLPALISEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ V G S + ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSEEGVAHVLNSSLNKTQIKQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ R KLLYV PE + E + L L + N ++++ +DEAHC+SEWGHDFRP
Sbjct: 106 FNDIN--SGRTKLLYVAPESLIKEDY---LDFLKQAN-ISFVAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L + N +P+IALTATA P V+ DI L + VFK S R NLFY+V
Sbjct: 160 YRNLKGIIDKIAN-VPVIALTATATPKVQDDIQKTLGMSDAV-VFKESFNRPNLFYEV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRKVNK 326
D + +FI K GK GI+YC +R+ + A +AL
Sbjct: 216 -RPKVDVEKEIVKFINKNKGK------SGIVYCLSRKKVEEFAQTLQVNGINALPYHAGL 268
Query: 327 HERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+GRAGRD
Sbjct: 269 DQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
G + +C ++ + LE + + +++E
Sbjct: 329 GGEGHCLAFYDPKDIEKLEKFLAQKSVSEKE 359
>gi|407452782|ref|YP_006724507.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
gi|403313766|gb|AFR36607.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
Length = 734
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 204/391 (52%), Gaps = 50/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGF +FK Q++AI LL D+FV MPTG G + + I G
Sbjct: 8 LAEELKKYFGFSTFKG--QQEAIISTLLGGKDVFVLMPTGG----GKSLCYQLPALISEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ V G S + ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSEEGVAHVLNSSLNKTQIKQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ R KLLYV PE + E + L L + N ++++ +DEAHC+SEWGHDFRP
Sbjct: 106 FSDIN--SGRTKLLYVAPESLIKEDY---LDFLKQAN-ISFVAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L + N +P+IALTATA P V+ DI L + VFK S R NLFY+V
Sbjct: 160 YRNLKGIIDKIAN-VPVIALTATATPKVQDDIQKTLGMSDAV-VFKESFNRPNLFYEV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRKVNK 326
D + +FI K GK GI+YC +R+ + A +AL
Sbjct: 216 -RPKVDVEKEIVKFINKNKGK------SGIVYCLSRKKVEEFAQTLQVNGINALPYHAGL 268
Query: 327 HERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+GRAGRD
Sbjct: 269 DQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
G + +C ++ + LE + + +++E
Sbjct: 329 GGEGHCLAFYDPKDIEKLEKFLAQKSVSEKE 359
>gi|406659948|ref|ZP_11068084.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
gi|405556351|gb|EKB51290.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
Length = 726
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 217/417 (52%), Gaps = 50/417 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+Q + KLK +FGF F+ ++ I +L+ + FV MPTGA G + + I
Sbjct: 2 DQFVKEKLKKIFGFSQFRG--NQEPIVDNILKGKNTFVIMPTGA----GKSLCYQLPAVI 55
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ K + + + S K+E
Sbjct: 56 QDGTAIV-----------ISPLIALM-------KNQVDQLNAFGINAHFLNSTLNKSETN 97
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ +E ++ + KLLYV PE E L+ KL+++ +DEAHC+SEWGHDFR
Sbjct: 98 KVKKE--VLSGKTKLLYVAPESLTKEENILFLKDA----KLSFVAIDEAHCISEWGHDFR 151
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ + G S+PIIALTATA P V+QDI L + ++K+S R+NL+Y+V
Sbjct: 152 PEYRKIKSIIAQVGESLPIIALTATATPKVQQDIQRNLHMEEA-DLYKSSFNRTNLYYEV 210
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ ++ + ++I+ GK GIIYC +R+ ++AD L+
Sbjct: 211 -RPKIKNETKKQIIKYIKSHKGK------SGIIYCLSRKKVEEIADLLKVNGIKAAPYHA 263
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+++ R + Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 264 GLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE--YCEQGYFL 437
RDGL+ +C +++ LE K T+RE ++ + + E C + + L
Sbjct: 324 RDGLEGHCLMFYRYEDIIKLEKFNKDKPVTERENAKVLLQEMAAYAESSICRRKFLL 380
>gi|441500281|ref|ZP_20982448.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441435974|gb|ELR69351.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 723
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 219/417 (52%), Gaps = 57/417 (13%)
Query: 37 TAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGA 96
T LK FG+DSF+ Q+K I H +L D V MPTG G + + I G
Sbjct: 10 TDILKKHFGYDSFRH--QQKEIIHHILEGRDALVLMPTGG----GKSLCYQVPALIFEGV 63
Query: 97 DFILNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ +D ++ + G S Y + S ++ E ++
Sbjct: 64 TIV-----------ISPLIA----LMKDQVDALRLNGISAAY----LNSSLSQQEQAEVM 104
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
LR R+KLLY+ PER V+ ++ L KL+ I +DEAHC+S+WGHDFRP Y
Sbjct: 105 RLLR--DNRLKLLYLAPERLVSGDKGFI-NFLKDQAKLSMIAIDEAHCISQWGHDFRPEY 161
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+L L+ +P++ALTATA+ + DI+ LK + P K F +S R N++Y F
Sbjct: 162 TQLATLKSVFP-EVPVVALTATADKLTQDDILQQLKLHNPKK-FVSSFNRENIYY---FV 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVN 325
+ SY + +F+ K ++ GIIY +R LA+ L ++
Sbjct: 217 SPKRRSYDQLLQFLNK------HKDDTGIIYTLSRASAESLAEQLIADGYDARPYHAGLD 270
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+ R + Q+ F++ +I +ITATI+FGMGID+ NVRFVVH +P +I YYQE+GRAGRDG
Sbjct: 271 RDVRDKHQDLFIKDQIKIITATIAFGMGIDKSNVRFVVHMDLPKNIEGYYQETGRAGRDG 330
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY-----CEQGYFL 437
L+S +++S K L+ ++ + +T++ ++ LK N M EY C + Y L
Sbjct: 331 LKSEALLFYSYADVKKLKSFVEVEGNTQQSEIMLKKLN--EMAEYGELRTCRRKYLL 385
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 204/393 (51%), Gaps = 59/393 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L + LK FG+DSF+ ++ I L+ D+ V MPTG G + + + PG
Sbjct: 14 LESALKHYFGYDSFRP--GQRQIIEKALQNQDLLVVMPTGG----GKSLCYQLPALLKPG 67
Query: 96 ADFILNGNVRSRNGWISPILSSFYLR---FRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ +SP+++ + +D+ S L EL + +
Sbjct: 68 LTVV-----------VSPLIALMQDQVQALQDNGIPATFLNSSLSGTEL------RERER 110
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
AIL+ +KL+Y+ PER + E L + +A I +DEAHCVSEWGHDFR
Sbjct: 111 AILDG------EMKLVYIAPERLLNEG---RLAGWLSQVYVAAIAIDEAHCVSEWGHDFR 161
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYD 271
P YR+L +LRQ+ N +PI+ALTATA V+ DII L P V STF R NL+Y+
Sbjct: 162 PEYRQLSQLRQWFAN-VPIMALTATATERVRYDIIEQLNLQDP--VLHVSTFNRPNLYYE 218
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K SY + + I + +A GIIYC +R+ +L L+R
Sbjct: 219 VRPKH--KQSYRELLQLIRQ------QAGASGIIYCLSRKRVDELTTKLQRDGISALPYH 270
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS Q F+R + V+ ATI+FGMGI++ +VRFVVH+ +P +I YYQESGRA
Sbjct: 271 AGMDNQLRSENQSRFIRDNVQVMVATIAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRA 330
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVI--KTDTST 412
GRDG + C ++ S K++E++I K D +T
Sbjct: 331 GRDGEPARCTLFFSMGDVKTVEFLISQKVDPNT 363
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 218/421 (51%), Gaps = 56/421 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L A + FG SF+ + I + + HD+FV MPTG G ++ + P
Sbjct: 23 DLKANNRRYFGNKSFR--PNQHEIINATMSGHDVFVLMPTGG----GKSLTYQLPAICCP 76
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + + P++S D+ ++ S + E + S E + I
Sbjct: 77 GVTLV-----------VCPLVSLIM-----DQIMHLSQAS--IRAEHLSSNLEYEEQRQI 118
Query: 155 LEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
L++L +LLYVTPE+ A +++ L++L R LA IV+DEAHCVS+WGHDFRP
Sbjct: 119 LQQLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRP 178
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y+ LG L+Q + +P++ALTATA VK+D++ L K +F+ + R NL Y V+
Sbjct: 179 DYQNLGILKQKFPD-VPLMALTATATMRVKEDVVQALGLCKCI-IFRQTFNRPNLRYSVV 236
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------K 323
K Y + FI K+N + GIIYC ++ + + LR+
Sbjct: 237 --PKTKKVYEEIDAFI-----KENYPHESGIIYCFSKMDCERVCEQLRKTGHKIGFYHAS 289
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ ER+RVQ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QESGRAGR
Sbjct: 290 MDPQERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGR 349
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKT----DTSTKR--------EQLELKFKNYLSMLEYC 431
D L + C +Y+S +++++ TST R QL+ F N M YC
Sbjct: 350 DNLPASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQLKTNFDNLQRMGAYC 409
Query: 432 E 432
E
Sbjct: 410 E 410
>gi|294499016|ref|YP_003562716.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium QM B1551]
gi|294348953|gb|ADE69282.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium QM B1551]
Length = 711
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 222/420 (52%), Gaps = 57/420 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ LT L++ FG+DSF+ + Q+++IR++L H+ MPTG G + +I
Sbjct: 4 EQALT-HLQSYFGYDSFR-KGQEESIRYVL-EGHNTACIMPTGG----GKSLC----YQI 52
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L G ISP++S K + T + I S T TE +
Sbjct: 53 P---SLLLEGTTL----VISPLISLM-------KDQVDTLNAAGIPATYINSSLTHTEVQ 98
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
LEE+ L KLLYV PER + F LQ L + + VDEAHC+S+WGHDFR
Sbjct: 99 QRLEEVAL--GEYKLLYVAPERLESPQFLEQLQML----PIPLVAVDEAHCISQWGHDFR 152
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+Y R+ EL N+ ++ LTATA P V++DI L N+ Y V T R NL + V
Sbjct: 153 PSYLRINELISKLSNAPIVMGLTATATPQVREDICRALHINEEYTVM-TGFERENLSFAV 211
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +D ++++++I K D +A GIIY TR+ +L L++
Sbjct: 212 VKG---QDRISYIEQYIRK---NDQEA---GIIYAATRKDVEELHARLQKSGVNVSKYHA 262
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+N + R Q F++ ++ V+ AT +FGMGID+ N+RFV+H+ +P ++ +YYQE+GRAG
Sbjct: 263 GMNGNSRDEEQNRFLQDDVQVMVATSAFGMGIDKSNIRFVLHYQLPKNMESYYQEAGRAG 322
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE-----QGYFL 437
RDGL S C + +S + ++I+ TS ++Q++ + +M+ YC Q Y L
Sbjct: 323 RDGLPSECIVLYSPQDIRVQRFLIEQSTSNPKKQIQ-DLEKLQNMVNYCHTEGCLQAYIL 381
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 669 FGLHHFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 718
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 719 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 760
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 761 KKDPIIKLLYVTPEKVCASNRLITTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 820
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK P +VF S R NL Y V+
Sbjct: 821 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILSP-QVFSMSFNRHNLKYYVLPKKPK 878
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L++ ++
Sbjct: 879 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 932
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 933 RDAVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 992
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E F N SM+ YCE
Sbjct: 993 SHCLLFYTYHDVTRLKRLILMEKDGNHHTKETHFNNLYSMVHYCE 1037
>gi|436838278|ref|YP_007323494.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384069691|emb|CCH02901.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 735
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 146/425 (34%), Positives = 218/425 (51%), Gaps = 65/425 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+D F+ +Q+ IR IL D V MPTG G V + + PG +
Sbjct: 27 LKRYYGYDRFR-PMQEAVIRSIL-SGRDTVVLMPTGG----GKSVCFQIPALMQPGLCVV 80
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D ++ + G + Y I S Q E +A+ E
Sbjct: 81 -----------VSPLIA----LMKDQVEAMHLNGIAAAY----INSSQGAKEIRAVEENC 121
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
R K +IKLLYV+PE+ ++ESF+ L L KL+ +DEAHC+S WGHDFRP Y +L
Sbjct: 122 R--KGQIKLLYVSPEKLLSESFYTFLNSL----KLSMFAIDEAHCISSWGHDFRPEYTQL 175
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR++ N +PIIALTATA+ +QDI L + P VF S R+NL V+
Sbjct: 176 NTLRRWFPN-VPIIALTATADRLTRQDIADRLAMHDP-AVFIDSFNRTNLSLQVLPG--- 230
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ + + + K + GIIYC +R+ +A L K ++ +E
Sbjct: 231 TNRIGQIAKLLSL------KPDTSGIIYCLSRKSCESVAAKLIEKGYSAAYYHAGMDPNE 284
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+RVQE+F+R ++ ++ ATI+FGMGID+ NVR+V+H+ MP +I YYQE GRAGRDGL S
Sbjct: 285 RARVQEAFLRDDVRIMCATIAFGMGIDKSNVRWVMHYNMPKNIEGYYQEIGRAGRDGLPS 344
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG---------YFLVI 439
+++S + + ++ T L+++ M +Y E YF
Sbjct: 345 QTVLFYSFADVATYKDML---TENNPANLQVQLAKLERMQQYAEANTCRRQILLSYFSEQ 401
Query: 440 LVFPC 444
L PC
Sbjct: 402 LAEPC 406
>gi|256820777|ref|YP_003142056.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429746398|ref|ZP_19279750.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429756068|ref|ZP_19288682.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|256582360|gb|ACU93495.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429166284|gb|EKY08277.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429172170|gb|EKY13749.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 729
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 211/384 (54%), Gaps = 46/384 (11%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 2 EMTKDDLHNALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G ISP+++ ++ + D ++ + + + S TK
Sbjct: 51 CYQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKN 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGH
Sbjct: 101 EIREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+
Sbjct: 155 DFRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEA-NVFKSSFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDVEKLE 349
>gi|419801388|ref|ZP_14326616.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|419845355|ref|ZP_14368628.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
gi|385193739|gb|EIF41095.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK262]
gi|386415831|gb|EIJ30351.1| ATP-dependent DNA helicase RecQ [Haemophilus parainfluenzae HK2019]
Length = 618
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 211/389 (54%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+++FG+ SF+ + Q++ I H L D V M TG G + + PG +
Sbjct: 19 LRSVFGYQSFR-KGQEEVI-HAALSGQDALVVMATGN----GKSLCYQIPALCFPGLTLV 72
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + E +
Sbjct: 73 -----------ISPLISLM-------KDQVDQLQANGIEADFLNSSQTPEQQQQV--ENK 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y ++++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 113 LISGQLKLLYVSPEKVMTNSFF----QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLG 168
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ N+ PI+ALTATA+ + +QDI++ LK + P+K + S R N+ Y L+
Sbjct: 169 GLKAAFPNA-PIMALTATADYATRQDILTHLKLDNPHK-YIGSFDRPNIRYT------LE 220
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ L + K+ GI+YC +R +A+ LR K + R
Sbjct: 221 EKFKPMEQLTRFVLAQKGKS---GIVYCNSRSKVERIAEILRNKGVSAAAYHAGMETALR 277
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 278 ERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 337
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 338 AVLFYEPADYAWLQKILLEKPETPQRQIE 366
>gi|372223763|ref|ZP_09502184.1| RecQ familyATP-dependent DNA helicase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 733
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 205/384 (53%), Gaps = 50/384 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S EL LK FGF FK LQ++ I +I L +D FV MPTG G + +
Sbjct: 4 SAMELQEALKKYFGFSQFKG-LQEQVISNI-LGDNDTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G + +SP+++ ++ + D V+ + ++ S KTE
Sbjct: 58 MKEGTAIV-----------VSPLIA--LMKNQVDAIRGVSSEEGIAH--VLNSSLNKTEI 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN--KLAYIVVDEAHCVSEWGH 209
K + + + KLLYV PE E +++ +N ++++ VDEAHC+SEWGH
Sbjct: 103 KKVKSD--ITNGVTKLLYVAPESLTKE------ENIEFFNGVTISFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L ++ G++IPII LTATA P V++DII L KVFK S R NLF
Sbjct: 155 DFRPEYRNLRKIISRLGDNIPIIGLTATATPKVQEDIIKNLGMVDA-KVFKASFNRPNLF 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-------- 321
Y+V K+ A + F+++ GK GI+YC +R+ +LA L+
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQNSGK------SGIVYCLSRKKVEELAQVLQVNGISAVP 265
Query: 322 --RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGFDAKTRAKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C Y++ + LE
Sbjct: 326 RAGRDGGEGHCLAYYAYKDVEKLE 349
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 670 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 719
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 720 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 761
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 762 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 821
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 822 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILQP-QVFSMSFNRHNLKYYVLPKKPK 879
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 880 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 933
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 934 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 993
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 994 SHCLLFYTYHDVTRLKRLILMEKEGNHHTRETHINNLYSMVHYCE 1038
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 211/414 (50%), Gaps = 51/414 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG SF+ Q +AI + +D F+ MPTG G + + +
Sbjct: 664 REMMNVFRQKFGLYSFRPN-QLQAINAAIC-GYDCFILMPTGG----GKSLCYQLPALLT 717
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + +SP+ K+ I+ L L++ + S T
Sbjct: 718 PGVTIV-----------VSPL-----------KSLIIDQVQKLISLDISAAHLSSSVTDE 755
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +++ EL +P +KLLY+TPE+ + ++ L+ L LA V+DEAHCVS+WG
Sbjct: 756 QAQSVYRELAKKEPSLKLLYLTPEKISASQKIGDALRALYERGMLARFVIDEAHCVSQWG 815
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L LR+ +P +ALTATA P V+ DI+ L P K F +S R NL
Sbjct: 816 HDFRPDYKKLQLLRK-NYPKVPTMALTATATPRVRTDILHQLGMTNP-KWFMSSFNRPNL 873
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y V+ K+S + E I++ N+CGI+YC +R+ AD ++
Sbjct: 874 HY-VVTSKKGKNSTEEIIEMIKRDF-----RNDCGIVYCLSRKDCDSFADTMKSNGIKAL 927
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ H+R +Q ++ +I V+ ATI+FGMGID+ NVRFV+H +P SI YYQES
Sbjct: 928 SYHAGLSDHQRLEIQGRWISEQIKVVCATIAFGMGIDKPNVRFVIHATLPKSIEGYYQES 987
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG + C +++ +I+ D+++ E + N ++ +CE
Sbjct: 988 GRAGRDGENAECILFYHYGDMMRHRKMIEGDSTSNWEAQKTHMDNLFKIVAFCE 1041
>gi|255037353|ref|YP_003087974.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950109|gb|ACT94809.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 737
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 211/396 (53%), Gaps = 51/396 (12%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
KV L KLK +FG+ F+ + Q+ I++ILL + FV MPTGA G + +
Sbjct: 7 KVINDTLKGKLKEIFGYSQFRGD-QEVIIQNILL-GKNTFVIMPTGA----GKSLCYQLP 60
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + ISP+++ ++ + D+ + + L + T+
Sbjct: 61 ALVSDGLTIV-----------ISPLIA--LMKNQVDQLTAFGINAQFLNSTLTKAEMTRV 107
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ A+ +KLLY+ PE E L+ + K++++ +DEAHC+SEWGH
Sbjct: 108 KTDAL-------DGTLKLLYIAPESLTKEDNLDFLKRV----KISFVAIDEAHCISEWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YRR+ + + GN +PIIALTATA P V+QDI L+ + + FK+S R NL+
Sbjct: 157 DFRPEYRRIHGIIENIGN-LPIIALTATATPKVQQDIRKNLQMEEA-ETFKSSFNRKNLY 214
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y++ KD + +I GK GI+YC +R+ ++A+ L
Sbjct: 215 YEI---RPKKDVKKQLIRYIRNNKGK------SGIVYCLSRKTVEEVAELLNVNDVRALP 265
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ + R Q++F+ E +VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+G
Sbjct: 266 YHAGLDANTRMANQDAFLNEECDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RAGRDGL+ C +++S + LE K T T+R+
Sbjct: 326 RAGRDGLEGNCLMFYSYDDIQKLEKFNKDKTVTERD 361
>gi|393779596|ref|ZP_10367834.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609916|gb|EIW92711.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 727
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 210/383 (54%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 1 MTKDDLHNALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSLC 49
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P +L G ISP+++ ++ + D ++ + + + S TK E
Sbjct: 50 YQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKNE 99
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGHD
Sbjct: 100 IREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGHD 153
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+Y
Sbjct: 154 FRPEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEA-NVFKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 213 EV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GR
Sbjct: 265 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 325 AGRDGGEGHCLAFYSYKDVEKLE 347
>gi|224025973|ref|ZP_03644339.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
gi|224019209|gb|EEF77207.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
Length = 727
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 209/399 (52%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL D FV MPTG + S++ + +
Sbjct: 7 LTEQLKKYFGFDTFKG--NQEAIIRNLLEGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS K++I +SD I+SG+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSLT------KSAIDQVKSD------ILSGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+H+ K+++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVGFLKHV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P VK DI L + FK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVKMDIQKNLGMTDAVE-FKSSFNRP 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A+V I K + ++ + + GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEV------RAKTANVDRDIIKFIRQNEEKS--GIIYCLSRKKVEELAEVLQANGIK 260
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ RS Q++F++ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQ
Sbjct: 261 ARPYHAGMDSATRSANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C ++S + LE ++ +++E
Sbjct: 321 ETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVSEQE 359
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 200/395 (50%), Gaps = 53/395 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L + LK FG+ SF+ L ++ I L D+ V MPTG
Sbjct: 5 QPLESTLKKYFGYTSFR--LGQQQIIEQALNNQDLLVVMPTGG----------------- 45
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENK 152
G R G ++ ++S +D S+ G + + + Q ++ +
Sbjct: 46 -GKSLCFQLPALLRKG-LTVVVSPLIALMQDQVQSLRNNGIGATFLNSTLTTYQVRSREE 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
AIL ++KLLYV PER +++ F + + +A +DEAHCVSEWGHDFR
Sbjct: 104 AILSG------KVKLLYVAPERLLSDRFLPFIDLVQHQIGIASFAIDEAHCVSEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYD 271
P YR+L LRQ N +P IALTATA V+ DII L KP + ++F R NL+YD
Sbjct: 158 PDYRQLRALRQRYPN-VPTIALTATATDRVRSDIIQQLNLTKP--IIHVASFNRPNLYYD 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K +Y +K+ + K G GIIYC +R D+ L++
Sbjct: 215 V--QPKQKQAYNQLKQLVTKHEG-------AGIIYCLSRRKVDDITMKLQQDGISALPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ ER Q F+R + ++ AT++FGMGI++ +VRFV+H+ +P +I +YYQESGRA
Sbjct: 266 AGLSDAERESNQTRFIRDDARLMVATVAFGMGINKPDVRFVIHYDLPRNIESYYQESGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
GRDG + C I+ K++EY+I KTD +R
Sbjct: 326 GRDGGAARCTIFFGYGDVKTVEYLIDQKTDVQEQR 360
>gi|423239789|ref|ZP_17220905.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392645829|gb|EIY39552.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
Length = 605
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ I++IL + D V MPTG G + + + G +
Sbjct: 5 LKNYFGYDSFR-PLQQDIIQNILTQ-KDTLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +TEN + E
Sbjct: 59 -----------VSPLISLMKDQVESLQANGIAARA-------LNSSNNETENINLRREC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PER + E+ ++LL+ + +++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 100 -LQGKIKLLYISPERLLIET-NFLLKDI----QISLFAIDEAHCISQWGHDFRPEYTQLK 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PI+ALTATA+ ++DI L P K+F +S R NL +V
Sbjct: 154 VLRNQFP--KVPIVALTATADKITRKDIAQQLALKDP-KIFISSFDRPNLSLEVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD + EFIEK N CGIIYC +R T ++A L ++ ++
Sbjct: 211 KDKARTILEFIEK------HKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDM 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG++S
Sbjct: 265 RDKAQNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMES 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V+ + +T+ Q E+ + M +Y E
Sbjct: 325 DTLLFYSLG-----DLVMLSKFATESSQQEINLEKLHRMQQYAE 363
>gi|409098551|ref|ZP_11218575.1| ATP-dependent DNA helicase RecQ [Pedobacter agri PB92]
Length = 729
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 213/397 (53%), Gaps = 61/397 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLV----GSVVSARSRVR 91
L L+ FGFD+FK + Q+ I +IL ++ FV MPTG + +++S + +
Sbjct: 7 LFDNLQNFFGFDNFKGD-QESIITNIL-EGNNTFVIMPTGGGKSICYQLPALMSEGTAIV 64
Query: 92 IPPGADFILN--GNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
I P + N +R+ G S + +L +K+ I +SDL +SGQTK
Sbjct: 65 ISPLIALMKNQVDQLRAFGGNDS---IAHFLNSSLNKSEITQVKSDL------LSGQTK- 114
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE A ++ +L +L+ K++++ VDEAHC+SEWG
Sbjct: 115 -----------------LLYVAPESLAKQDNIEFL--NLI---KISFVAVDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ ++ GN+IPIIALTATA P V+QDI+ L + +FK+S R NL
Sbjct: 153 HDFRPEYRKIKQVIAGLGNNIPIIALTATATPKVQQDIMKNLGMTEA-TLFKSSFNRPNL 211
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
FY++ +D + ++I+ GK GIIYC +R+ ++A+AL
Sbjct: 212 FYEI---RPKRDITKEIIKYIKSNPGK------SGIIYCLSRKKVEEVAEALNLNGISAL 262
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ R+ Q+ F+ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 263 PYHAGLEPKVRAETQDKFLMEDAEVIVATIAFGMGIDKPDVRFVIHHDVPKSMEGYYQET 322
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRAGRDG + C ++++ L +K ++RE
Sbjct: 323 GRAGRDGGEGVCIAFYAQKDVDKLAKFMKDKPVSERE 359
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 216/410 (52%), Gaps = 55/410 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ ++ I L D+ + MPTG G + + + PG
Sbjct: 15 LEQALKHFFGYDSFRP--GQREIVEAALSKRDMLIVMPTGG----GKSLCFQLPALLKPG 68
Query: 96 ADFILNGNVRSRNGWISPILSSFYLR---FRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ +SP+++ + RD+ S L +E T++
Sbjct: 69 LTVV-----------VSPLIALMQDQVESLRDNGIGATFLNSTLSLME------TRSRET 111
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
AIL+ +IKLLYV PER ++E F L + ++ +DEAHCVSEWGHDFR
Sbjct: 112 AILDG------KIKLLYVAPERLLSERFLPFLDQVAASLGISAFAIDEAHCVSEWGHDFR 165
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ ++R + IPI+ALTATA V+ DI+ L +PY + S R NL+Y+V
Sbjct: 166 PDYRQILQVRDRYPH-IPIMALTATATDRVRLDIMQQLALREPY-IHVASFNRPNLYYEV 223
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------- 322
K S+A + + I+K G GIIYC +R++ +LA L++
Sbjct: 224 RAKT--KHSFAELLQIIDKNGGS-------GIIYCLSRKNVDELAYKLQQVGISALPYHA 274
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+N +R+ Q F+R ++ ++ AT++FGMGI++ +VRFVVH+ +P ++ YYQESGRAG
Sbjct: 275 GLNDSDRTSNQTRFIRDDVQIMVATVAFGMGINKPDVRFVVHYNLPRNLEGYYQESGRAG 334
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG + C ++ +K++EY+I+ + +++ + + +++Y E
Sbjct: 335 RDGEPAQCILFLGYGDRKTIEYLIEQKPDPQEQRIAT--QQFRRVIDYAE 382
>gi|408370738|ref|ZP_11168512.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
gi|407743730|gb|EKF55303.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
Length = 733
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 204/387 (52%), Gaps = 56/387 (14%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E +L LK FGF FK LQ+K I+ I + H+ FV MPTG G + +
Sbjct: 4 AEIDLQGSLKEYFGFSQFKG-LQEKVIKSI-VNDHNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ G + ISP+++ ++ + G S + +++ N
Sbjct: 58 VKEGTAIV-----------ISPLIA-----LMKNQVDAIRGISSNKGIAHVLNSSL---N 98
Query: 152 KAILEELRLVKPRI-----KLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
K+ E+R VK I KLLYV PE E + R K++++ VDEAHC+SE
Sbjct: 99 KS---EIRQVKEDITSGVTKLLYVAPESLTKEEY----IEFFRTVKISFVAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YR + + Q G+ IPIIALTATA V++DI+ L K VFK S R
Sbjct: 152 WGHDFRPEYRNIRTIIQRLGDDIPIIALTATATEKVQEDILKNLGIGKA-NVFKASFNRP 210
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----R 322
NL+Y+V K+ + F+++ GK GIIYC +R+ +LA L +
Sbjct: 211 NLYYEV--RPKTKNVDVDIIRFVKQNTGK------SGIIYCLSRKKVEELAQTLEVNGIK 262
Query: 323 KVNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
V H R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQ
Sbjct: 263 AVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLE 403
E+GRAGRDG + +C +++ + LE
Sbjct: 323 ETGRAGRDGGEGHCLAFYAYKDIEKLE 349
>gi|402307191|ref|ZP_10826218.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
gi|400379031|gb|EJP31880.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
Length = 740
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 209/397 (52%), Gaps = 66/397 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E LT +LK FGFD+FK + Q+ IR+ LL+ +D FV MPTG G + + I
Sbjct: 4 EVNLTQQLKHYFGFDAFKGD-QEAIIRN-LLKGNDTFVLMPTGG----GKSLCYQLPSLI 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ ++ G S + E + + NK
Sbjct: 58 MDGIAIV-----------VSPLIA-----LMKNQVDVINGMS---EEEGVAHYLNSSLNK 98
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTES--------------FHYLLQHLVRYNKLAYI 196
A +E ++ ++ R KLLYV PE + + F +L + K+++
Sbjct: 99 AEIERVKTDVLSGRTKLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEE-----VKISFY 153
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VDEAHC+SEWGHDFRP YR + + G + PIIALTATA V+ DI L +
Sbjct: 154 AVDEAHCISEWGHDFRPEYRNIRKAIDILGRA-PIIALTATATDKVRTDIKKTLGISDA- 211
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
K FK+S RSNL+Y+V D + +F+++ GK GIIYC +R+ +L
Sbjct: 212 KEFKSSFNRSNLYYEV--RQKSADIDTQIVKFVKQHAGK------SGIIYCLSRKKVEEL 263
Query: 317 ADALR----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A L+ ++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+
Sbjct: 264 AAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYD 323
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+P S+ YYQE+GRAGRDG + YC +++S K LE
Sbjct: 324 IPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLE 360
>gi|315607430|ref|ZP_07882426.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
gi|315250862|gb|EFU30855.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
Length = 740
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 209/397 (52%), Gaps = 66/397 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E LT +LK FGFD+FK + Q+ IR+ LL+ +D FV MPTG G + + I
Sbjct: 4 EVNLTQQLKHYFGFDAFKGD-QEAIIRN-LLKGNDTFVLMPTGG----GKSLCYQLPSLI 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ ++ G S + E + + NK
Sbjct: 58 MDGIAIV-----------VSPLIA-----LMKNQVDVINGMS---EEEGVAHYLNSSLNK 98
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTES--------------FHYLLQHLVRYNKLAYI 196
A +E ++ ++ R KLLYV PE + + F +L + K+++
Sbjct: 99 AEIERVKTDVLSGRTKLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEE-----VKISFY 153
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VDEAHC+SEWGHDFRP YR + + G + PIIALTATA V+ DI L +
Sbjct: 154 AVDEAHCISEWGHDFRPEYRNIRKAIDILGRA-PIIALTATATDKVRTDIKKTLGISDA- 211
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
K FK+S RSNL+Y+V D + +F+++ GK GIIYC +R+ +L
Sbjct: 212 KEFKSSFNRSNLYYEV--RQKSADIDTQIVKFVKQHAGK------SGIIYCLSRKKVEEL 263
Query: 317 ADALR----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A L+ ++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+
Sbjct: 264 AAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYD 323
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+P S+ YYQE+GRAGRDG + YC +++S K LE
Sbjct: 324 IPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLE 360
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 217/421 (51%), Gaps = 56/421 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L A + FG SF+ + I + + HD+FV MPTG G ++ + P
Sbjct: 23 DLKANNRRYFGNKSFR--PNQHEIINATMSGHDVFVLMPTGG----GKSLTYQLPAICCP 76
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + + P++S D+ ++ S + E + S E + I
Sbjct: 77 GVTLV-----------VCPLVSLIM-----DQIMHLSQAS--IRAEHLSSNLEYEEQRQI 118
Query: 155 LEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
L++L +LLYVTPE+ A +++ L++L R LA IV+DEAHCVS+WGHDFRP
Sbjct: 119 LQQLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGHDFRP 178
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y+ LG L+Q + +P++ALTATA VK+D++ L K +F+ + R NL Y V+
Sbjct: 179 DYQNLGILKQ-KFSDVPLMALTATATMRVKEDVVQALGLCKCI-IFRQTFNRPNLRYSVV 236
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------K 323
K Y + FI K+N GIIYC ++ + + LR+
Sbjct: 237 --PKTKKVYEEIDAFI-----KENYPRESGIIYCFSKMDCERVCEQLRKTGHKIGFYHAS 289
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ ER+RVQ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QESGRAGR
Sbjct: 290 MDPQERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGR 349
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKT----DTSTKR--------EQLELKFKNYLSMLEYC 431
D L + C +Y+S +++++ TST R Q++ F N M YC
Sbjct: 350 DNLPASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQMKTNFDNLQRMGAYC 409
Query: 432 E 432
E
Sbjct: 410 E 410
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 209/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 544 FGLHHFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 593
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L L++ + +T +E +I +L
Sbjct: 594 -------ISPL-----------RSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLS 635
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 636 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 695
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 696 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFTMSFNRHNLKYYVLPKKPK 753
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 754 KVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKNGLPALAYHAGLSDSA 807
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 808 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 867
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ + L+ +I + E F N SM+ YCE
Sbjct: 868 SHCLLFYTYYDVTRLKRLILMEKDGNHHTRETHFNNLYSMVHYCE 912
>gi|374598547|ref|ZP_09671549.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|423323213|ref|ZP_17301055.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
gi|373910017|gb|EHQ41866.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|404609764|gb|EKB09128.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
Length = 731
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 210/381 (55%), Gaps = 47/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L +LK FGF FK LQ+ ++ I+ H+ FV MPTG +S
Sbjct: 5 EIDLHKELKRFFGFSQFKG-LQEDVVKSII-SGHNTFVIMPTGG---------GKSLCYQ 53
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L+G +SP+++ ++ +I + ++ ++ S TKTE
Sbjct: 54 LPA--LVLDGTAIV----VSPLIA----LMKNQVDAIRSLSTEQGIAHVLNSSLTKTEVN 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E+++ + KLLYV PE E + LQ + KL+++ +DEAHC+SEWGHDFR
Sbjct: 104 QVKEDIK--QGITKLLYVAPESLTKEEYVNFLQEV----KLSFVAIDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR L + + G+ IPII LTATA P V++DI+ L+ VFK S R NL+Y++
Sbjct: 158 PEYRNLRNIIRQLGD-IPIIGLTATATPKVQEDILKNLEIPNA-NVFKASFNRPNLYYEI 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K+ + + FI++ GK G+IYC +R+ ++A+ L+
Sbjct: 216 --KPKTKNIESDIIRFIKQRKGK------SGVIYCLSRKKVEEIANVLQVNGISAVPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VR+V+H +P S+ +YYQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C Y+S + LE
Sbjct: 328 RDGGEGWCLAYYSYKDIEKLE 348
>gi|288924568|ref|ZP_06418505.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
gi|288338355|gb|EFC76704.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
Length = 740
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 209/397 (52%), Gaps = 66/397 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E LT +LK FGFD+FK + Q+ IR+ LL+ +D FV MPTG G + + I
Sbjct: 4 EVNLTQQLKHYFGFDAFKGD-QEAIIRN-LLKGNDTFVLMPTGG----GKSLCYQLPSLI 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ ++ G S + E + + NK
Sbjct: 58 MDGIAIV-----------VSPLIA-----LMKNQVDVINGMS---EEEGVAHYLNSSLNK 98
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTES--------------FHYLLQHLVRYNKLAYI 196
A +E ++ ++ R KLLYV PE + + F +L + K+++
Sbjct: 99 AEIERVKTDVLSGRTKLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEE-----VKISFY 153
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VDEAHC+SEWGHDFRP YR + + G + PIIALTATA V+ DI L +
Sbjct: 154 AVDEAHCISEWGHDFRPEYRNIRKAIDILGRA-PIIALTATATDKVRTDIKKTLGISDA- 211
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
K FK+S RSNL+Y+V D + +F+++ GK GIIYC +R+ +L
Sbjct: 212 KEFKSSFNRSNLYYEV--RQKSADIDTQIVKFVKQHAGK------SGIIYCLSRKKVEEL 263
Query: 317 ADALR----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A L+ ++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+
Sbjct: 264 AAVLKVNEIKAAPYHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYD 323
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+P S+ YYQE+GRAGRDG + YC +++S K LE
Sbjct: 324 IPKSLEGYYQETGRAGRDGGEGYCLVFYSPKDLKKLE 360
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 209/398 (52%), Gaps = 57/398 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
++ L L+ FGF+ FK E Q++ I IL +D FV MPTG + +++S +
Sbjct: 4 KKSLFDNLQNFFGFEKFKGE-QEEIITSIL-SGNDTFVIMPTGGGKSMCYQLPALMSDGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N V + S + +L +KT + D ++SG+TK
Sbjct: 62 AIVISPLIALMKN-QVDQLRAFGSTDSIAHFLNSSLNKTETAKVKQD------VLSGETK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
LLYV PE + E+ +L R ++++ VDEAHC+SEW
Sbjct: 115 ------------------LLYVAPESLSKQENIDFL-----RDIDISFVAVDEAHCISEW 151
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP YR++ ++ G +IPIIALTATA P V+QDI L+ +VFK+S R N
Sbjct: 152 GHDFRPEYRKIRQIIGQLGENIPIIALTATATPKVQQDIQKNLQMQNS-QVFKSSFNRPN 210
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
LFY++ + +KE I+ ++ KA GIIYC +R+ ++A+ L
Sbjct: 211 LFYEI------RPKKNELKEIIKYIKSQNGKA---GIIYCLSRKKVEEVAETLNVNGIKA 261
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ + R+ Q+ F+ ++ VI ATI+FGMGID+ +VRFV+H+ MP S+ YYQE
Sbjct: 262 LPYHAGLDANTRATTQDKFLMEDVQVIVATIAFGMGIDKPDVRFVIHYDMPKSMEGYYQE 321
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+GRAGRDG + C ++ + L +K ++RE
Sbjct: 322 TGRAGRDGGEGNCIAFYDQKDIDKLAKFMKDKPVSERE 359
>gi|295704335|ref|YP_003597410.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium DSM 319]
gi|294801994|gb|ADF39060.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium DSM 319]
Length = 711
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 223/420 (53%), Gaps = 57/420 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ LT L++ FG+DSF+ + Q+++IR++L H+ MPTG G + +I
Sbjct: 4 EQTLT-HLQSYFGYDSFR-KGQEESIRYVL-EGHNTACIMPTGG----GKSLC----YQI 52
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L G ISP++S K + T + I S T TE +
Sbjct: 53 P---SLLLEGTTL----VISPLISLM-------KDQVDTLNAAGIPATYINSSLTHTEVQ 98
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
LEE+ L KLLYV PER + F LQ L + + VDEAHC+S+WGHDFR
Sbjct: 99 QRLEEVAL--GEYKLLYVAPERLESPQFLEQLQML----PIPLVAVDEAHCISQWGHDFR 152
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+Y R+ EL N+ ++ LTATA P V++DI L+ N+ Y V T R NL + V
Sbjct: 153 PSYLRINELISKLSNAPIVMGLTATATPQVREDICRALRINEEYTVM-TGFERENLSFAV 211
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +D ++++++I K D +A GIIY TR+ +L L++
Sbjct: 212 VKG---QDRISYIEQYIRK---NDQEA---GIIYAATRKDVEELHARLQKSGVNVSKYHA 262
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ + R Q F++ ++ V+ AT +FGMGID+ N+RFV+H+ +P ++ +YYQE+GRAG
Sbjct: 263 GMSANSRDEEQNRFLQDDVQVMIATSAFGMGIDKSNIRFVLHYQLPKNMESYYQEAGRAG 322
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE-----QGYFL 437
RDGL S C + +S + ++I+ TS ++Q++ + +M+ YC Q Y L
Sbjct: 323 RDGLPSECIVLYSPQDIRVQRFLIEQSTSNPKKQIQ-DLEKLQNMVNYCHTEGCLQAYIL 381
>gi|167540323|ref|XP_001741831.1| ATP-dependent DNA helicase recQ [Entamoeba dispar SAW760]
gi|165893416|gb|EDR21673.1| ATP-dependent DNA helicase recQ, putative [Entamoeba dispar SAW760]
Length = 508
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 185/367 (50%), Gaps = 50/367 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
EQ + L F SF+ Q++ I L+ D V MPTG + V++ R
Sbjct: 21 EQRIDETLHKCFNIQSFR--PQQREIILSTLQHKDTVVIMPTGGGKSLCFQLQPVLTERI 78
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N +G ++SF L S +K
Sbjct: 79 TIVISPLIALMQN----QVDGLNKRGITSFILN----------------------STLSK 112
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+E +L L P + LLYVTPE+ T+ F +++ L KL VDEAHC+S+WG
Sbjct: 113 SEATKVLSLLNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSIKKLGMFAVDEAHCISQWG 172
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP+Y L L++ T IPIIALTATA P VK+DII L+ P K+F +S R N+
Sbjct: 173 HDFRPSYLELSYLKK-TYPDIPIIALTATATPKVKEDIIKSLELKNP-KIFTSSFDRPNI 230
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
++ VI+ DL Y + + + L + K GIIYC TR + +
Sbjct: 231 YFKVIYKDL----YETPIQILTQILHQHEKEG--GIIYCSTRMECELIEKYISTNGYPVA 284
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ ER +Q+ + GE+NV+ ATI+FGMGIDR +VRFV+HW +P +I + QE+
Sbjct: 285 KYHAGMKSEERETIQKKWENGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEA 344
Query: 379 GRAGRDG 385
GRAGRDG
Sbjct: 345 GRAGRDG 351
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 141/410 (34%), Positives = 218/410 (53%), Gaps = 56/410 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F ++F+ ++ I L DIFV MPTG G + + I G +
Sbjct: 163 LRNVFNLENFRG--NQEEIIKAALNKEDIFVLMPTGG----GKSLCYQLPAMIQDGLTVV 216
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+LS + D ++++ L S T +E I++ L+
Sbjct: 217 -----------ISPLLSLIH----DQVSNLLNKNIPAVALN---SNCTYSERTLIMKTLQ 258
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+K++YVTPE + F +L L R +L V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 259 ACHS-VKIVYVTPELLNKSTQFSNILHELDRRGRLCRFVIDEAHCVSQWGHDFRPDYKEL 317
Query: 219 GEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
G + R+F IP+IALTATA V+ D+++ L + KVF+ S R NL Y V+
Sbjct: 318 GIIKRKFP--RIPLIALTATATKKVELDVLNSLGI-EGCKVFRQSFNRPNLKYYVM--SK 372
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------NKHE 328
K S + F+ N+ GIIYC +++ ++++ L + +K E
Sbjct: 373 TKKSLTDIVSFVHTYY-----PNSPGIIYCTSKKDCEEMSEKLNEHLKTTFYHAGLSKRE 427
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R++VQE + G I +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRDGL+S
Sbjct: 428 RNKVQEMWNDGTIKIIVATIAFGMGIDKSDVRFVIHYSLPKSLEGYYQETGRAGRDGLES 487
Query: 389 YCRIYHSEHSKKSLEYVI-----KTDTSTKREQLELKFKNYLSMLEYCEQ 433
C +Y++ K++E++I T R++ ELK+ +++YCE
Sbjct: 488 VCILYYNYGDTKTIEFLIANNHNATSDQKNRQREELKY-----VVQYCEN 532
>gi|73668704|ref|YP_304719.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
gi|72395866|gb|AAZ70139.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
Length = 881
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/432 (33%), Positives = 222/432 (51%), Gaps = 64/432 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+ + L FG+ SF+ LQ++ I+ +L R D+FV MPTG G + + + G
Sbjct: 8 MYSALHQYFGYTSFR-PLQEEIIKDVLER-KDVFVLMPTGG----GKSMCYQLPALLMEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP++S K + ++ + S Q+ EN+ +
Sbjct: 62 VTVV-----------VSPLISLM-------KDQVDGLEANGIAAACMNSAQSARENRDV- 102
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+ ++ R+K+LYV PER + L+ K++ + +DEAHC+SEWGHDFRP Y
Sbjct: 103 -KTAFLENRLKVLYVAPERLMMPGTLAFLKK----GKVSLLAIDEAHCISEWGHDFRPEY 157
Query: 216 RRLGELRQF-TG-NSIPIIALTATAEPSVKQDIISVLKFNKPYK--VFKTSTFRSNLFYD 271
R+L LR TG IPIIALTATA V++DIIS L + P + + S R NL+Y+
Sbjct: 158 RKLKLLRDPKTGFPDIPIIALTATATERVREDIISQLNLHLPPEKGPYVASFNRKNLYYE 217
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH 327
V K++++ + +++ + G+ GIIYC++R L L R + H
Sbjct: 218 V---RPKKETFSEITDYLRRHRGE------AGIIYCQSRNSVEALTKKLNLAGFRALPYH 268
Query: 328 ------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
ER+R QE F++ ++ +I ATI+FGMGID+ NVRFV+H+ +P ++ +YYQE+GR
Sbjct: 269 AGLSDTERNRNQEMFIKDDVEIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETGRG 328
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG------- 434
GRDG C ++ S + +EY I T+ K + + L M+ YCE
Sbjct: 329 GRDGSPCECILFFSRGDRFKIEYFISQKTNEKEKDISL--VQLRQMVAYCEGNKCRRQTL 386
Query: 435 --YFLVILVFPC 444
YF L PC
Sbjct: 387 MEYFGEELSEPC 398
>gi|348679514|gb|EGZ19330.1| hypothetical protein PHYSODRAFT_491373 [Phytophthora sojae]
Length = 400
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 201/383 (52%), Gaps = 37/383 (9%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
+R D FV MPTG G + + + PG + +SP+LS
Sbjct: 1 MRGEDCFVLMPTGG----GKSLCYQLPAVLSPGVTIV-----------VSPLLS----LI 41
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAV-TESFH 181
+D T+++ + S T ++I ELR P +KLLY+TPE+ V +
Sbjct: 42 QDQVTALIQNPGCGIPAAFLTSQTALTLKRSITAELRRPVPSLKLLYLTPEKIVKSAEMA 101
Query: 182 YLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPS 241
LLQ L R LA V+DEAHCVS+WGHDFRP Y +LG L++ T ++P++ALTATA P
Sbjct: 102 DLLQTLYRNKMLARFVIDEAHCVSQWGHDFRPEYSQLGMLKK-TFPNVPLMALTATAPPK 160
Query: 242 VKQDIISVLKF-NKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN 300
V Q + LK N P VF S R NL ++V L D A E + + + K +
Sbjct: 161 VIQGVQRSLKISNGP--VFSMSFNRQNLTFEVRDKPLGSDVKAM--EALYELISKTYPRD 216
Query: 301 NCGIIYCRTREHTTDLADALRRK----------VNKHERSRVQESFMRGEINVITATISF 350
GI+YC T++ + D+A+ L + + +R VQE++ G+++++ ATI++
Sbjct: 217 AVGIVYCMTKQDSEDVANYLFDRGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAY 276
Query: 351 GMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVI-KTD 409
GMGI++ +VR+V+H+ + SI YYQE+GRAGRDG S C I++S + ++
Sbjct: 277 GMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCIIFYSARDISKMRSILFMPQ 336
Query: 410 TSTKREQLELKFKNYLSMLEYCE 432
++ + + +M EYCE
Sbjct: 337 KGMTKQTRAVHMEKLRAMAEYCE 359
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 220/418 (52%), Gaps = 61/418 (14%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG SF+ ++ I + + D+FV MPTG G ++ + + G +
Sbjct: 487 KIVFGNHSFR--PNQREIINATMSGCDVFVLMPTGG----GKSLTYQLPALLCAGITLV- 539
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
ISP++S + + + ++ S + +G E IL+EL
Sbjct: 540 ----------ISPLVSLIQDQIMNLLQTNISAAS-------LSAGMEWAEQLEILQELSS 582
Query: 161 VKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ KLLYVTPE+ A +ES L+ L + LA V+DEAHCVS+WGHDFRP Y+ LG
Sbjct: 583 ENSKYKLLYVTPEKVAKSESLIRHLEILNSRSLLARFVIDEAHCVSQWGHDFRPDYQGLG 642
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI--FDDL 277
L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y V+ +
Sbjct: 643 VLKQKFPN-IPMLALTATATTSVKEDVVQALGLVNCV-VFRQSFNRPNLWYSVVPKTNKC 700
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTR---EHTTDLADALRRK-------VNKH 327
L+D + +FI ++N + CGIIYC +R E T++ A K ++
Sbjct: 701 LED----IDKFI-----RENHFDECGIIYCLSRMDCEKVTEMLRAFGHKAAFYHGSMDPG 751
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
+R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRAGRDG +
Sbjct: 752 KRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 811
Query: 388 SYCRIYHSEHSKKSLEYVIKTD-------------TSTKREQLELKFKNYLSMLEYCE 432
S C +Y+S ++++I ++ LE +N L M+ YCE
Sbjct: 812 SSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCE 869
>gi|212693848|ref|ZP_03301976.1| hypothetical protein BACDOR_03370 [Bacteroides dorei DSM 17855]
gi|237708472|ref|ZP_04538953.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
gi|212663600|gb|EEB24174.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229457401|gb|EEO63122.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
Length = 605
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 216/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ I++IL + D V MPTG G + + + G +
Sbjct: 5 LKNYFGYDSFR-PLQQDIIQNILAQ-KDTLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +TEN + E
Sbjct: 59 -----------VSPLISLMKDQVESLQANGIAARA-------LNSSNNETENINLRREC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PER + E+ ++LL+ + +++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 100 -LQGKIKLLYISPERLLIET-NFLLKDI----QISLFAIDEAHCISQWGHDFRPEYTQLK 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PI+ALTATA+ ++DI L P K+F +S R NL +V
Sbjct: 154 VLRNQFP--KVPIVALTATADKITRKDIAQQLVLKDP-KIFISSFDRPNLSLEVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD + EFIEK N CGIIYC +R T ++A L ++ ++
Sbjct: 211 KDKARTILEFIEK------HKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDM 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG++S
Sbjct: 265 RDKAQNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMES 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V+ + +T+ Q E+ + M +Y E
Sbjct: 325 DTLLFYSLG-----DLVMLSKFATESSQQEINLEKLHRMQQYAE 363
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/409 (33%), Positives = 215/409 (52%), Gaps = 56/409 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ ++ + L D+FV MPTG G + + + G +
Sbjct: 229 LREVFKMKEFR--TNQREVIQACLSGKDVFVLMPTGG----GKSICYQLPALVYDGITIV 282
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV----SGQTKTENKAIL 155
+SP+LS + R+ L Q ++ S ++ E +
Sbjct: 283 -----------VSPLLSLVQDQIRN-----------LLQKGILALPINSNLSRAERDLVF 320
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ L + K+ YVTPE A + FH +L LV +L V+DEAHCVS+WGHDFRP
Sbjct: 321 QVLGGDELICKIFYVTPELIAKSGHFHDVLSGLVCRGRLKRFVIDEAHCVSQWGHDFRPD 380
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
Y+ LG +R S+PIIALTATA V+ DI+ L + + FK S RSNL Y+V
Sbjct: 381 YKELGSMRARY-PSVPIIALTATATQKVEMDILENLGI-RGCETFKMSFNRSNLRYEVRA 438
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------K 323
+ D + V+ C CGIIYC +++ +++ LR+
Sbjct: 439 KTSTVELDIASFVQTHFPDC---------CGIIYCTSKKECEMISEKLRKYMGTAFYHAG 489
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++K+ER+ VQE + RGE VI ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGR
Sbjct: 490 LSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 549
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DGL+S C ++++ KK + ++I+ EQ + + ++ +++++CE
Sbjct: 550 DGLESVCVLFYTYGDKKKISFMIEKGDGG-YEQKQRQREDLEAVIQFCE 597
>gi|399024201|ref|ZP_10726247.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
gi|398081075|gb|EJL71860.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
Length = 734
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 203/396 (51%), Gaps = 60/396 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ +LK FGF +FK Q++ I LL DIFV MPTG G + + I G
Sbjct: 8 LSGELKKYFGFSTFKG--QQEQIIENLLDGKDIFVLMPTGG----GKSLCYQLPALISEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTG-RSDLYQLELIVSGQTKTENKAI 154
+ +SP+++ ++ V G SD ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++ + KLLYV PE + E + L+ + +++ +DEAHC+SEWGHDFRP
Sbjct: 106 FDDIK--SGKTKLLYVAPESLIKEDYLDFLKEVT----ISFFAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR L + N +P+IALTATA P V+ DI L VFK S R NL+Y+V
Sbjct: 160 YRNLKLIIDKIAN-VPVIALTATATPKVQDDIQKTLGMANAL-VFKESFNRPNLYYEVRP 217
Query: 273 ---IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALR 321
+ +++K FI + GK GI+YC +R + A +AL
Sbjct: 218 KVNVDKEIVK--------FINQHKGK------SGIVYCLSRRKVEEFAQLLQVNGINALP 263
Query: 322 RKVNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ RV Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+G
Sbjct: 264 YHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETG 323
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RAGRDG + YC ++ + LE + ++RE
Sbjct: 324 RAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSERE 359
>gi|282896865|ref|ZP_06304871.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
gi|281198274|gb|EFA73164.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
Length = 719
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 215/411 (52%), Gaps = 55/411 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L +LK FG+D F+ ++ I L D+ V MPTG G + + + P
Sbjct: 5 DLEKELKKYFGYDQFRP--GQRQIIEDALENRDLMVVMPTGG----GKSLCFQLPALLKP 58
Query: 95 GADFILNGNVRSRNGWISPILSSFYLR---FRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
G + +SP+++ + R++ S S L + Q ++
Sbjct: 59 GLTVV-----------VSPLIALMQDQVEALRNNNISATLINSSL------TTYQVRSRE 101
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+AI+ ++KLLYV PER V+E F +L + LA V+DEAHCVSEWGHDF
Sbjct: 102 EAIM------NGKVKLLYVAPERLVSERFLPILDVVKEKFGLANFVIDEAHCVSEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR+L LR+ + +P IALTATA V+ DII L +P V S R NL+Y+
Sbjct: 156 RPEYRQLILLRKRFSH-VPTIALTATATDRVRADIIQQLGLKQP-AVHIASFNRQNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V + ++SY + E I+K G GIIYC TR++ +L L+
Sbjct: 214 VRPKN--RNSYGEILEIIKKNEGS-------GIIYCLTRKNVDELTLKLQNSQIAALPYH 264
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ ER++ Q F+R ++ ++ ATI+FGMGI++ +VRFV+H +P ++ +YYQESGRA
Sbjct: 265 AGLVDQERAKNQTRFIRDDVRIMVATIAFGMGINKPDVRFVIHCDLPRNLESYYQESGRA 324
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRDG S C ++ S K++E+ I T + EQL K + +++Y E
Sbjct: 325 GRDGEPSRCTLFFSFSDVKTIEWSIGKKTDPQ-EQLIAK-QQLRQVIDYAE 373
>gi|255535742|ref|YP_003096113.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
gi|255341938|gb|ACU08051.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
Length = 732
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/402 (34%), Positives = 206/402 (51%), Gaps = 60/402 (14%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K + +L LK FGF +FK Q+ I LL DIFV MPTG G + +
Sbjct: 2 KTNTADLPKLLKKYFGFSTFKGHQQE--IIQNLLEGQDIFVLMPTGG----GKSLCYQLP 55
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTG-RSDLYQLELIVSGQTK 148
+ G + +SP+++ ++ V G SD ++ S K
Sbjct: 56 ALMSEGTAIV-----------VSPLIA-----LMKNQVDAVNGLSSDQGVAHVLNSSLNK 99
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
T+ K + +++R R KLLYV PE + E + L+ + K++++ +DEAHC+SEWG
Sbjct: 100 TQIKQVFDDIR--AGRTKLLYVAPESLIKEDYLEFLKEV----KISFVAIDEAHCISEWG 153
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR L + + +P+IALTATA P V+ DI L + VFK S R NL
Sbjct: 154 HDFRPEYRNLKLIIDKIAD-VPVIALTATATPKVQDDIQKTLGMSNAL-VFKESFNRPNL 211
Query: 269 FYDV-----IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA------ 317
+Y+V I +++K FI GK GI+YC +R + A
Sbjct: 212 YYEVRPKVNIDREIVK--------FINARKGK------SGIVYCLSRRKVEEFAQLLQVN 257
Query: 318 --DALRRKVNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+AL +++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ +P S+ +
Sbjct: 258 GINALPYHAGLDQKTRVMNQDKFLMEEADVIVATIAFGMGIDKPDVRFVIHYDIPKSLES 317
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YYQE+GRAGRDG + YC ++ + LE + ++RE
Sbjct: 318 YYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSERE 359
>gi|408491728|ref|YP_006868097.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
gi|408469003|gb|AFU69347.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
Length = 728
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 207/382 (54%), Gaps = 54/382 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGF+ FK LQ++ I+ I+ D FV MPTG G + + I G
Sbjct: 6 LHQELKKYFGFNEFKG-LQEQVIKSII-SNKDTFVIMPTGG----GKSLCYQLPALIKEG 59
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ + S+ + + ++ S KT+ K +
Sbjct: 60 TAIV-----------VSPLIA-----LMKNQVDAIRNISEHHGVAHVLNSSLNKTQVKQV 103
Query: 155 LEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E++ KL+YV PE TE +L + ++++ +DEAHC+SEWGHDFRP
Sbjct: 104 KEDIS--SGITKLVYVAPESLTKTEYIEFL-----KGENISFLAIDEAHCISEWGHDFRP 156
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV- 272
YR L + + G +IPII LTATA P V++DI+ L+ K FK S R NL+Y++
Sbjct: 157 EYRNLKNIIERIGENIPIIGLTATATPKVQEDILKNLRIPNS-KTFKDSFNRPNLYYEIR 215
Query: 273 -IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH 327
DD+ D + +F++K GK GIIYC +R+ L+ AL+ + V H
Sbjct: 216 PKTDDVDSD----IIKFVKKNSGK------SGIIYCLSRKRVEQLSQALQVNGVKAVPYH 265
Query: 328 ------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
RSR Q+ F+ +I+V+ ATI+FGMGID+ +VRFVVH +P SI +YYQE+GRA
Sbjct: 266 AGLDAKSRSRHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHNDIPKSIESYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + +C Y++ + LE
Sbjct: 326 GRDGGEGHCVAYYNHKDIEKLE 347
>gi|383450034|ref|YP_005356755.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
gi|380501656|emb|CCG52698.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
Length = 731
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 206/381 (54%), Gaps = 47/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L +LK FGF+ FK LQ++ + I+ H+ FV MPTG +S
Sbjct: 5 EIDLYKELKKYFGFNQFKG-LQEQVVTSII-SGHNTFVIMPTGG---------GKSLCYQ 53
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L G +SP+++ ++ +I + S++ ++ S TKTE
Sbjct: 54 LPA--LVLEGTAIV----VSPLIA----LMKNQVDAIRSLGSEMGVAHVLNSSLTKTEIN 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ + +V + KLLYV PE E + L + KL+++ +DEAHC+SEWGHDFR
Sbjct: 104 QV--KADIVSGKTKLLYVAPESLTKEEYIQFLNEV----KLSFVAIDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR L + + G+ +PII LTATA P V++DI+ L VFK S R NL+Y+V
Sbjct: 158 PEYRNLRNIIRQLGD-VPIIGLTATATPKVQEDILKNLDMPDA-NVFKASFNRPNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K+ A + FI++ GK G+IYC +R+ ++A L+
Sbjct: 216 --RPKTKNVEADIIRFIKQHKGK------SGVIYCLSRKKVEEIAQVLQVNGISAVPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R++ Q+ F+ ++ V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C Y+S + LE
Sbjct: 328 RDGGEGHCLAYYSYKDIEKLE 348
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 205/396 (51%), Gaps = 60/396 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ +LK FGF +FK Q++ I LL DIFV MPTG G + + I G
Sbjct: 8 LSGELKKYFGFSTFKG--QQEQIIDNLLGGKDIFVLMPTGG----GKSLCYQLPALISEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTG-RSDLYQLELIVSGQTKTENKAI 154
+ +SP+++ ++ V G SD ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSDDGVAHVLNSSLNKTQTKQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++ + KLLYV PE + + + L+ + K+++ +DEAHC+SEWGHDFRP
Sbjct: 106 FDDIK--SGKTKLLYVAPESLIKDDYLDFLKEV----KISFFAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR L ++ N +P+IALTATA P V+ DI L VFK S R NL+Y+V
Sbjct: 160 YRNLKQIIDKIAN-VPVIALTATATPKVQDDIQKTLGMTNAL-VFKESFNRPNLYYEVRP 217
Query: 273 ---IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALR 321
+ +++K FI + GK GI+YC +R + A +AL
Sbjct: 218 KVNVDKEIVK--------FINQHKGK------SGIVYCLSRRKVEEFAQLLQVNGINALP 263
Query: 322 RKVNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ RV Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+G
Sbjct: 264 YHAGLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETG 323
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RAGRDG + +C ++ + LE + ++RE
Sbjct: 324 RAGRDGGEGHCLAFYDPKDIEKLEKFLAQKPVSERE 359
>gi|213962479|ref|ZP_03390741.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
gi|213954805|gb|EEB66125.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
Length = 727
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 210/383 (54%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+++ +L LK FGF++FK ++ I ++ + FV MPTG +S
Sbjct: 1 MTKNDLHNALKHYFGFEAFKG--HQEEIITSVINKENTFVIMPTGG---------GKSLC 49
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P +L G ISP+++ ++ + D ++ + + + S TK E
Sbjct: 50 YQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKNE 99
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ ++E++ K KLLYV PE + E + L+ + ++++ VDEAHC+SEWGHD
Sbjct: 100 IREVMEDISAGK--TKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGHD 153
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR + + + G++IPI+ALTATA P V++DI+ L + VFK+S R NL+Y
Sbjct: 154 FRPEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEA-NVFKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+ A + F+++ + GIIYC +R+ DLA L+
Sbjct: 213 EV--RPKTKNVDADIIRFVKQ------NSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GR
Sbjct: 265 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 325 AGRDGGEGHCLAFYSYKDVEKLE 347
>gi|443322394|ref|ZP_21051417.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
gi|442787869|gb|ELR97579.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
Length = 701
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 218/413 (52%), Gaps = 57/413 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q+L + LK FG D F+ LQ++ I +L D+ V MPTG G + + +
Sbjct: 2 QDLKSALKRFFGHDVFR-PLQEQIIAEVL-NNRDLLVIMPTGG----GKSLCYQLPALLK 55
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS--DLYQLELIVSGQTKTEN 151
PG + +SP++S D+ + + R + + S + ++ +
Sbjct: 56 PGLTLV-----------VSPLIS-----LMQDQVNALKDRGIGATFLNSSLNSQEIQSRS 99
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ IL+ IKLLYV PER ++E F L + + ++ + +DEAHCVSEWG DF
Sbjct: 100 REILQG------NIKLLYVAPERLLSEGFSVFLTQIQQDVGISALAIDEAHCVSEWGQDF 153
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ LRQ +P++ALTATA V+QDII L KP V+ S R NL+Y+
Sbjct: 154 RPEYRQIKGLRQRYPQ-VPMVALTATATTRVRQDIIQQLGLIKP-GVYVDSFNRPNLYYE 211
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V+ D K Y + ++I+ G GI+YC +R ++A L+
Sbjct: 212 VVSKD--KRDYPQLLKYIKLQQGS-------GIVYCLSRRRVEEVASRLQADGISSLPYH 262
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS Q F+ ++ V+ ATI+FGMGI++ +VRFV H+ +P ++ +YYQE GRA
Sbjct: 263 GGMDDTVRSVYQNRFIGDDVRVMVATIAFGMGINKPDVRFVFHYDLPRNLESYYQEVGRA 322
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKREQLELKFKNYLSMLEYCE 432
GRDG ++ C ++ S ++++Y+I K+D S +R L + SM++Y E
Sbjct: 323 GRDGERAICVLFFSRGDIRTIDYLIKQKSDPSAQR----LARQGLSSMVDYAE 371
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 215/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ I++IL + D V MPTG G + + + G +
Sbjct: 5 LKNYFGYDSFR-PLQQDIIQNILAQ-KDTLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +TEN + E
Sbjct: 59 -----------VSPLISLMKDQVESLQANGIAARA-------LNSSNNETENINLRREC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PER + E+ ++LL+ + +++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 100 -LQGKIKLLYISPERLLIET-NFLLKDI----QISLFAIDEAHCISQWGHDFRPEYTQLK 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PI+ALTATA+ ++DI L P K+F +S R NL +V
Sbjct: 154 VLRNQFP--KVPIVALTATADKITRKDIAQQLALKDP-KIFISSFDRPNLSLEVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD + EFIEK N CGIIYC +R T +A L ++ ++
Sbjct: 211 KDKARTILEFIEK------HKNECGIIYCMSRSKTESVAAMLMKQGIRATVYHAGLSSDM 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG++S
Sbjct: 265 RDKAQNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMES 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V+ + +T+ Q E+ + M +Y E
Sbjct: 325 DTLLFYSLG-----DLVMLSKFATESSQQEINLEKLHRMQQYAE 363
>gi|343083870|ref|YP_004773165.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342352404|gb|AEL24934.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 709
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/404 (33%), Positives = 215/404 (53%), Gaps = 53/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+DSF+ + Q+ IR ++ D MPTGA G V + + PG +
Sbjct: 7 LKKFYGYDSFRGQ-QESVIRQVI-EKKDCIALMPTGA----GKSVCYQVPAMVLPGLTLV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ ++ + D + + + + +S Q ++A+
Sbjct: 61 -----------ISPLIA--LMKDQVDALNEIGIPAAFLNSTMDISEQRYVSDQAM----- 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
K IKLLYV PER + + H L+ L N L+ + VDEAHCVS+WGHDFRP Y +LG
Sbjct: 103 --KGGIKLLYVAPERLFSGT-HPLVNALKEMN-LSLVAVDEAHCVSQWGHDFRPEYLKLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ ++ P +ALTATA+ ++DI + L NKP + F +S R N+ Y V L
Sbjct: 159 ALRKAFPDT-PFLALTATADKQTRKDISARLHLNKP-EWFISSFDRPNITYRVT---LRS 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
D + + +F++ ++ N+ GI+YC +R+ + A L ++K R
Sbjct: 214 DGFGKLVDFLQ------HRPNDAGIVYCLSRKSVENTAAKLNANGFSALPYHAGLSKENR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
QE F++ E+ +I ATI+FGMGID+ NVRFVVH MP +I +YYQE+GRAGRDGL
Sbjct: 268 QENQEKFIKDEVKIIVATIAFGMGIDKSNVRFVVHTNMPQNIESYYQETGRAGRDGLPGE 327
Query: 390 CRIYHSEHSKKSLEYVIKT-DTSTKREQLELKFKNYLSMLEYCE 432
+++S +L+ +I++ D ++ K +M+ +C+
Sbjct: 328 ALLFYSLGDSITLKRMIESADNEEYVRHMKAKMD---TMVAFCQ 368
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 219/416 (52%), Gaps = 60/416 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 624 LKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------------V 669
Query: 99 ILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G+ R ISP+LS +L + K ++ G + Q + I+S T + +
Sbjct: 670 VTSGSTRGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILS----TLSGS 725
Query: 154 ILEELRLVKPRIKLLYVTPE-----RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ EE I+LLY+TPE +A+T S L+ L R KLA IV+DEAHCVS+WG
Sbjct: 726 LAEE------DIELLYITPEMINKSQAITRS----LEKLNRSRKLARIVIDEAHCVSQWG 775
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y+ LGELR Q G +P++ALTATA +VK D+I LK +VF S R N
Sbjct: 776 HDFRPDYKELGELRNQLPG--VPMMALTATATENVKVDVIHNLKMEG-CEVFSQSFNRPN 832
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y+V + A + + I K + AN GI+YC +R+ +A LR
Sbjct: 833 LTYEVRIKKKGTELLASIADTI-----KTSYANKSGIVYCLSRKTCEKVASGLRDDYRIK 887
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ ER+++Q+ + G +VI ATI+FGMGID+ +VRFV+H +P S+ YYQ
Sbjct: 888 AEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 947
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG +S C +Y+ ++ +I +K +Q + + ++++YCE
Sbjct: 948 ETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSK-QQKNRQRQMLHNVVQYCE 1002
>gi|449446630|ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
gi|449488107|ref|XP_004157941.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
Length = 729
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 212/434 (48%), Gaps = 54/434 (12%)
Query: 19 LTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVS 78
L+ N+ ++ K S++ LT L+ FG F+ + Q + I +L D F MPTG
Sbjct: 9 LSNNRPEKH--KYSKESLTKLLRWHFGHSEFRGK-QLETIEAVL-SGKDCFCLMPTGG-- 62
Query: 79 LVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
G V +IP A NG V + P+++ + ++ +
Sbjct: 63 --GKSVC----YQIPALAS---NGMVLV----VCPLIALM-------ENQVMALKEKGIS 102
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
E + S Q+ I E+L KP ++LLYVTPE T F L + L I +
Sbjct: 103 AEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLIAI 162
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+S WGHDFRP+YR+L LR N IPI+ALTATA P V++D+I L P V
Sbjct: 163 DEAHCISTWGHDFRPSYRKLSSLRSQLPN-IPILALTATAVPKVQKDVIISLGLENPL-V 220
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA- 317
K+S R N++Y+V + + C + + C IIYC R L+
Sbjct: 221 LKSSFNRPNIYYEVRYK------DLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLSV 274
Query: 318 ---------DALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
A + R V E ++ I V+ AT++FGMGIDR++VR V H+ +P
Sbjct: 275 YLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNIP 334
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT----------DTSTKREQLE 418
S+ A+YQESGRAGRD L S +Y+ ++ +E++++ +S++ +Q E
Sbjct: 335 KSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPE 394
Query: 419 LKFKNYLSMLEYCE 432
++ M+EYCE
Sbjct: 395 KSLTDFTQMVEYCE 408
>gi|227540043|ref|ZP_03970092.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
gi|227240118|gb|EEI90133.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
Length = 729
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 206/393 (52%), Gaps = 47/393 (11%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ L L+ FGFD+FK + ++AI +L D FV MPTG G + + +
Sbjct: 4 EKSLFDNLQDFFGFDTFKGD--QEAIITNVLNKKDTFVIMPTGG----GKSICYQLPALM 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ G + + S K E
Sbjct: 58 SQGTAIV-----------ISPLIA--LMKNQVDQLRAFGGTDSIAHF--LNSSLNKGEIT 102
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ +++ + + KLLYV PE E L+H+ ++++ VDEAHC+SEWGHDFR
Sbjct: 103 KVKQDV--TQGKTKLLYVAPESLSKEENIEFLRHIT----VSFVAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ ++ G +IPIIALTATA P V+ DI L+ +FK+S R+NL+Y+V
Sbjct: 157 PEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMTDA-TLFKSSFNRTNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------R 322
K+ + FI+ N + GI+YC +R+ ++A+ L
Sbjct: 216 ---RTKKNVVKEIVRFIK------NNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYHA 266
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R+ Q+ F+ ++ VI ATI+FGMGID+ +VR+V+H +P S+ YYQE+GRAG
Sbjct: 267 GLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C ++SE + L +K ++RE
Sbjct: 327 RDGGEGVCVTFYSEKDVEKLTKFMKDKPVSERE 359
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 204/393 (51%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ Q+ I L+ D+ + MPTG G + + + PG
Sbjct: 15 LEQALKHFFGYDSFRPGQQE--IVEAALQKRDMMIVMPTGG----GKSLCFQLPALLKPG 68
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENKA 153
+ +SP+++ D+ + G + + + +T++ A
Sbjct: 69 LTVV-----------VSPLIA-----LMQDQVEALQDNGIGATFLNSTLSTQETRSRETA 112
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
ILE +IKLLYV PER + E F L + ++ +DEAHCVSEWGHDFRP
Sbjct: 113 ILEG------KIKLLYVAPERLLGERFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRP 166
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ +R + IPI+ALTATA V+QDII L PY + S R NL+Y+V
Sbjct: 167 EYRQMQRVRDRYPD-IPIMALTATATERVRQDIIQQLTLRNPY-IHVASFNRPNLYYEV- 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K S+A V + I+K G GIIYC +R+ ++A L++
Sbjct: 224 -RPKTKHSFAEVLQIIQKKGGS-------GIIYCLSRKKVEEVAYKLQQSGIAALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+N +R+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGR
Sbjct: 276 MNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
D ++C ++ K ++Y+I K D +R
Sbjct: 336 DNEPAHCSLFFGYGDVKMIDYIIEQKPDPQEQR 368
>gi|345885011|ref|ZP_08836404.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
gi|345042066|gb|EGW46174.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
Length = 727
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 200/385 (51%), Gaps = 53/385 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT KLK FGFD FK + Q+ IR+ LL D FV MPTG + S++ +
Sbjct: 4 EVNLTEKLKHYFGFDKFKGD-QEAIIRN-LLDGKDTFVLMPTGGGKSLCYQLPSLIMEGT 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ + P + N V NG + YL K I R+D IVSG+TK
Sbjct: 62 AIVVSPLIALMKN-QVDVINGISEEDGIAHYLNSSLKKGEIDQVRAD------IVSGRTK 114
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LLYV PE E L+ + K+++ +DEAHC+SEWG
Sbjct: 115 ------------------LLYVAPESLNKEENVEFLKSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + P+IALTATA V+ DI+ L + FK+S R NL
Sbjct: 153 HDFRPEYRKIRCAIESIGTA-PVIALTATATDKVRTDIVRSLGIEDCAE-FKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V D+ + +FI++ GK GIIYC +R+ +LA L+
Sbjct: 211 YYEVRPKKSDDDTNKQIIKFIKQHAGK------SGIIYCLSRKKVEELAAILKANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ E+++I ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKAQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C +++S+ LE
Sbjct: 325 GRAGRDGEEGICIVFYSKKDLNKLE 349
>gi|319954189|ref|YP_004165456.1| ATP-dependent DNA helicase recq [Cellulophaga algicola DSM 14237]
gi|319422849|gb|ADV49958.1| ATP-dependent DNA helicase RecQ [Cellulophaga algicola DSM 14237]
Length = 733
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 202/384 (52%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+SE +L + LK FGF FK LQ+ I IL + FV MPTG G + +
Sbjct: 3 LSEIDLHSSLKKYFGFSEFKG-LQESVITSIL-EGKNCFVVMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKT 149
+ G I +SP+++ ++ + G S + + ++ S TKT
Sbjct: 57 LMQEGTAII-----------VSPLIA-----LMKNQVDAIRGISSEHGIAHVLNSSLTKT 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E K + ++ KLLYV PE + + LQ + KL+++ VDEAHC+SEWGH
Sbjct: 101 EIKQVKSDI--TSGITKLLYVAPESLTKDEYVEFLQSV----KLSFVAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + ++IPII LTATA P V++DII L +FK S R NLF
Sbjct: 155 DFRPEYRNLRSIISRLDDTIPIIGLTATATPKVQEDIIKNLGITDA-DLFKASFNRPNLF 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-------- 321
Y+V ++ A + F+++ GK GIIYC +R+ +LA L+
Sbjct: 214 YEV--RPKTQNIEADIIRFVKQNTGK------SGIIYCLSRKKVEELAQILQVNGVSAVP 265
Query: 322 --RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ RS+ Q+ F+ ++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGFDTKTRSKYQDMFLMEGVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDIEKLE 349
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 217/427 (50%), Gaps = 65/427 (15%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L A K +FG SF+ ++ + + + D+FV MPTG G ++ + + P
Sbjct: 446 KLEAYNKKVFGNHSFR--PNQREVINATMSGFDVFVLMPTGG----GKSLTYQLPALVCP 499
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S +D ++ + + E + I
Sbjct: 500 GITLV-----------ISPLVS----LIQDQIMHLLQAN---ISAAYLSANMEWAEQQEI 541
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHDF 211
L EL + KLLYVTPE+ LL++L N LA IV+DEAHCVS+WGHDF
Sbjct: 542 LRELSSDYCKYKLLYVTPEKVAKSDV--LLRNLESLNARGLLARIVIDEAHCVSQWGHDF 599
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP Y+ LG L++ P++ALTATA SVK+D++ L +F+ S R NL+Y
Sbjct: 600 RPDYKELGILKK-KFEKTPVLALTATATASVKEDVVQALGLVDCI-IFRQSFNRPNLWYS 657
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR--------- 322
V+ K + +FI K+N + CGIIYC +R +A+ L+
Sbjct: 658 VV--PKTKKCLDDIDKFI-----KENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYH 710
Query: 323 -KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ +R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRA
Sbjct: 711 GNMDAAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRA 770
Query: 382 GRDGLQSYCRIYHS----------------EHSKKSLEYVIKTDTSTKREQLELKFKNYL 425
GRDGL+S C +Y+S E S + Y +T++ R LE +N L
Sbjct: 771 GRDGLRSSCVLYYSYSDYIRVKHMIVQGQIEQSPWTPGYNRINNTNSDR-ILEKNTENLL 829
Query: 426 SMLEYCE 432
M+ YCE
Sbjct: 830 RMVSYCE 836
>gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
gi|19918649|gb|AAM07847.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
Length = 909
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 220/412 (53%), Gaps = 65/412 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ +F+ LQ++ IR +L R D+FV MPTG G + ++P +
Sbjct: 29 LRQYFGYTAFR-PLQEEIIRDVLDR-KDVFVLMPTGG----GKSIC----YQLP---SLL 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G +SP++S ++ + D + I + + A E+R
Sbjct: 76 LDGVTV----VVSPLIS------------LMKDQVDGLEANGIAAACMNSTQSA--REIR 117
Query: 160 LVKP-----RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
VK R+K+LY+ PER + L+ K++ +DEAHC+SEWGHDFRP
Sbjct: 118 DVKSAFLENRLKILYIAPERLMMPGTITFLKK----GKISLFAIDEAHCISEWGHDFRPE 173
Query: 215 YRRLGELRQF-TG-NSIPIIALTATAEPSVKQDIISVLKFN-KPYKVFKTSTF-RSNLFY 270
YR+L LR TG +P+IALTATA V++DII L + P K ++F RSNL+Y
Sbjct: 174 YRKLKLLRDPKTGFPDVPVIALTATATGRVRKDIIVQLGLDLDPEKGLYVASFNRSNLYY 233
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNK 326
+V KD+++ + +++ + G+ GIIYC++R + L L R +
Sbjct: 234 EVRPK---KDTFSEITDYLLRHRGE------AGIIYCQSRNNVETLTKKLNLAGFRALPY 284
Query: 327 H------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
H ERSR QE F++ ++++I ATI+FGMGID+ NVRFV+H+ +P ++ +YYQE+GR
Sbjct: 285 HAGLSDSERSRNQEMFIKDDVDIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETGR 344
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRDG C ++ S + +EY I T+ K + + L M+ YCE
Sbjct: 345 GGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEKDISL--VQLRQMVAYCE 394
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 220/416 (52%), Gaps = 60/416 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 618 LKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------------V 663
Query: 99 ILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G+ R ISP+LS +L + K ++ G + Q + I+S T + +
Sbjct: 664 VTSGSTRGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILS----TLSGS 719
Query: 154 ILEELRLVKPRIKLLYVTPE-----RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ EE I+LLY+TPE +A+T+S L+ L R KLA IV+DEAHCVS+WG
Sbjct: 720 MAEE------DIELLYITPEMVNKSQAITKS----LEKLNRSRKLARIVIDEAHCVSQWG 769
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y+ LGELR Q G +P++ALTATA +VK D+I L+ +VF S R N
Sbjct: 770 HDFRPDYKELGELRNQLPG--VPMMALTATATENVKVDVIHNLRMEG-CEVFSQSFNRPN 826
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y+V + A + + I K + AN GI+YC +R+ +A LR
Sbjct: 827 LTYEVRIKKKGTELLASIADTI-----KTSYANKSGIVYCLSRKTCEKVASGLRDDYRIK 881
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ ER+++Q+ + G +VI ATI+FGMGID+ +VRFV+H +P S+ YYQ
Sbjct: 882 AEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 941
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG +S C +Y+ ++ +I +K +Q + + ++++YCE
Sbjct: 942 ETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSK-QQKNRQRQMLHNVVQYCE 996
>gi|212213044|ref|YP_002303980.1| ATP-dependent DNA helicase [Coxiella burnetii CbuG_Q212]
gi|212011454|gb|ACJ18835.1| ATP-dependent DNA helicase [Coxiella burnetii CbuG_Q212]
Length = 601
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/397 (35%), Positives = 206/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG G + + + G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGG----GKSLCYQIPALVREGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE KA R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAKARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P IALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFIALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIRYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
SY + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KSYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADGYSALPYHAGLPAAQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|298209031|ref|YP_003717210.1| ATP-dependent DNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848958|gb|EAP86827.1| putative ATP-dependent DNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 734
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 206/383 (53%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++E L +LK FGF FK LQ++ I+ I+ D FV MPTG G + +
Sbjct: 3 LTEINLHEQLKKYFGFSQFKG-LQEQVIKSIV-SNEDTFVIMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
I G + +SP+++ ++ + D ++ + + + + S KTE
Sbjct: 57 LIKDGTAIV-----------VSPLIA--LMKNQVDALRSISSQEGIAHV--LNSSLNKTE 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ +L + KLLYV PE + + L+ ++++ +DEAHC+SEWGHD
Sbjct: 102 INQV--KLDITNGVTKLLYVAPESLTKDEYVDFLKE----QTISFLAIDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR L ++ + G+ IPII LTATA P V++DI+ L + FK S R NL+Y
Sbjct: 156 FRPEYRNLKKIIKRIGDDIPIIGLTATATPKVQEDILKNLNMSNA-NTFKASFNRPNLYY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+ ++ + FI+K GK GIIYC +R+ +LA L+
Sbjct: 215 EV--RPKTKEVFSDIIRFIKKRTGK------SGIIYCLSRKSVEELAQTLQVNGISAVPY 266
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GR
Sbjct: 267 HAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C +++ + LE
Sbjct: 327 AGRDGGEGHCLAFYAYKDIEKLE 349
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 145/410 (35%), Positives = 213/410 (51%), Gaps = 45/410 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ E Q AI + L D FV MPTG + + A +
Sbjct: 586 LKEKFRLKGFR-ENQIDAI-NATLAGKDTFVLMPTGGGKSLCYQLPA-----------LV 632
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL- 158
+G R ISP++S +D+ + + Q L+ S T+ + A+++ L
Sbjct: 633 RSGRTRGVTVVISPLVS-----LMEDQVQHLQKLN--IQAFLVNSETTQDQRSALMDSLY 685
Query: 159 -RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
V+ + LLYVTPE A + Q L R N+LA V+DEAHCVS+WGHDFRP Y+
Sbjct: 686 SADVENLVHLLYVTPEMLAKSTKMVSTFQWLHRKNRLARFVIDEAHCVSQWGHDFRPDYK 745
Query: 217 RLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
LGE R+ F G +P++ALTATA +V+ D I L +VF +S R NL+Y+V
Sbjct: 746 LLGEFRRHFMG--VPVMALTATATENVRADTIHNLSIEG-CEVFTSSFNRRNLYYEVRKK 802
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------V 324
K + I K++ GIIYC +R+ +A+ALR++ +
Sbjct: 803 AKGKGDIESIANLI-----KEDHHKQTGIIYCFSRKDCEGMAEALRKQHSIKAHHYHAGL 857
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
E+S+VQ+ + G +VI ATI+FGMGID+ NVRFV+H +P S+ YYQE+GRAGRD
Sbjct: 858 KSEEKSQVQKKWQAGTYHVIVATIAFGMGIDKGNVRFVIHHTIPKSLEGYYQETGRAGRD 917
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTD--TSTKREQLELKFKNYLSMLEYCE 432
GL S C +++ + +I D +T EQ + + + M+++CE
Sbjct: 918 GLDSACYLFYGYGDATKVRRMIDKDDENTTSWEQKQRQHHMFRLMIQFCE 967
>gi|326800755|ref|YP_004318574.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
gi|326551519|gb|ADZ79904.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
Length = 729
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 211/394 (53%), Gaps = 49/394 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ L L+ FGFD+FK + ++AI +L+ D FV MPTG G + + +
Sbjct: 4 EKTLFDNLQNFFGFDTFKGD--QEAIITNILQKKDTFVIMPTGG----GKSICYQLPALM 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ G + + S K+E
Sbjct: 58 SEGTAVV-----------ISPLIA--LMKNQVDQLRAFGGADSIAHF--LNSSLNKSEIT 102
Query: 153 AILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++ + + KLLYV PE A T++ +L + ++++ VDEAHC+SEWGHDF
Sbjct: 103 RVKQDV--LDGKTKLLYVAPESLAKTDNIEFL-----KLITVSFVAVDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ ++ G +IPIIALTATA P V+ DI L+ N +FK+S R NL+Y+
Sbjct: 156 RPEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMNDA-TLFKSSFNRPNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR---------- 321
V K+ + +FI+ N + GIIYC +R+ ++A+ L
Sbjct: 215 V---RPKKNVVKEIVKFIK------NNPSKSGIIYCLSRKKVEEIAEVLNINGISALPYH 265
Query: 322 RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R+ Q+ F+ ++ VI ATI+FGMGID+ +VR+V+H +P S+ YYQE+GRA
Sbjct: 266 AGLDAKTRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + C ++SE + L +K ++RE
Sbjct: 326 GRDGGEGVCIAFYSEKDIEKLTKFMKDKPVSERE 359
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 206/414 (49%), Gaps = 52/414 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG SF+ Q +AI +L D FV MPTG G + + +
Sbjct: 626 REMLKVFRQKFGLYSFRPN-QLQAINAAIL-GFDCFVLMPTGG----GKSLCYQLPALLL 679
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ K+ I+ L L++ + G T +
Sbjct: 680 PGVTIV-----------ISPL-----------KSLILDQVQKLTSLDIPAAHMSGGITDS 717
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ I EL +P +KLLYVTPE+ + ++ F LL L LA V+DEAHCVS+WG
Sbjct: 718 QASGIYRELSKKEPSLKLLYVTPEKISASQKFCNLLTTLYERGLLARFVIDEAHCVSQWG 777
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L LR+ +P+IALTATA P V+ DI+ L + P K F +S R NL
Sbjct: 778 HDFRPDYKKLNRLRE-NYPKVPVIALTATATPRVRTDILHQLGLSVP-KWFMSSFNRPNL 835
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK-- 326
Y +I K E I + K N CGI+YC +R+ D A +R+ K
Sbjct: 836 RYSII----AKKGKNCSDEVI--AMLKMKYKNECGIVYCLSRKDCDDYAMQMRKNGIKAL 889
Query: 327 --------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
R+ +Q ++ EI V+ ATI+FGMGID+ NVRFV+H +P SI YYQES
Sbjct: 890 SYHAGHTDSSRTDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQES 949
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG + C ++++ + +I+ D + N M+ +CE
Sbjct: 950 GRAGRDGENADCILFYNYADMHRIRKMIELDNPNP-TVTKTHIDNLYKMVSFCE 1002
>gi|359458485|ref|ZP_09247048.1| ATP-dependent DNA helicase RecQ [Acaryochloris sp. CCMEE 5410]
Length = 739
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/395 (34%), Positives = 200/395 (50%), Gaps = 60/395 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ + ++ + L+ D+ V MPTG G
Sbjct: 15 LEEALKHYFGYDQFR--VGQRPVIEAALQQQDLMVVMPTG-------------------G 53
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ++ ++S +D T++ +D+ L S T + I
Sbjct: 54 GKSLCFQLPGLLLPGLTVVISPLIALMQDQVTTLQV--NDIPATFLNSSIDAATARQRIS 111
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E + +IKLLYV PER + ESF LL + LA VDEAHCVSEWGHDFRP Y
Sbjct: 112 E---IYSGKIKLLYVAPERLLHESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEY 168
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--- 272
RRL E+RQ +P+ LTATA V+QDII L+ +P+ V S R NL+Y+V
Sbjct: 169 RRLAEVRQRYAQ-VPVYTLTATATERVRQDIIQQLQLRQPF-VHVASFNRPNLYYEVRPK 226
Query: 273 ---IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
+ DL ++ H G+D+ GI+YC +R +++ L+ R +
Sbjct: 227 SRQAYADLYREIRQH---------GQDS-----GIVYCLSRREVNEISARLQGDGIRALP 272
Query: 326 KHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H R+ QE F+R ++ V+ AT++FGMGID+ +VRFV+H+ +P +I YYQE+G
Sbjct: 273 YHAGMSDSARTLNQERFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRNIEGYYQEAG 332
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVI--KTDTST 412
RAGRDG S C ++ S +LE++I K D T
Sbjct: 333 RAGRDGEPSKCLLFFSTKDIHTLEWLIERKVDPET 367
>gi|114778864|ref|ZP_01453663.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
gi|114550899|gb|EAU53464.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Mariprofundus ferrooxydans PV-1]
Length = 724
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 146/424 (34%), Positives = 216/424 (50%), Gaps = 62/424 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D F+ +Q++ I + LL D FV MPTG + + A R G +
Sbjct: 16 LKDIFGYDMFR-PMQEEIICN-LLDGKDAFVLMPTGGGKSICYQIPAIMR----EGTGIV 69
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S ++ + D + ++ Y S E K +LE R
Sbjct: 70 -----------VSPLIS--LMKDQVDALTACGVKAAYYN-----SSLKAAEAKDVLE--R 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ LLYV PER +++SF L+ L KL+ +DEAHCVS+WGHDFRP Y RLG
Sbjct: 110 FEAGELDLLYVAPERLLSKSFLTKLEKL----KLSMFAIDEAHCVSQWGHDFRPEYVRLG 165
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR+ + +P++ALTATA+ ++DI L+ K K F S R N+ Y V +
Sbjct: 166 ELREIFPD-VPMLALTATADEHTREDISDRLQLGKA-KRFVASFDRPNIRYLVAEK---R 220
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ +F+ D N G+IYC +R+ DLA L+R + R
Sbjct: 221 QPLTQILQFL------DGWPNASGVIYCLSRKRVEDLAVNLQRHGIRAAAYHAGIPGRSR 274
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F+R + VI ATI+FGMG+D+ NVRFV+H +P SI +YYQE+GRAGRDGL+S
Sbjct: 275 ERVQDDFLRDRVKVIVATIAFGMGVDKPNVRFVIHHDLPKSIESYYQETGRAGRDGLESE 334
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------GYFLVIL 440
+ + + +I+ + + ++E+ N SM+ + E GYF L
Sbjct: 335 ALMLYGSGDVNLVRRLIENVDNIDQRRVEVHKLN--SMVAFSEALTCRRRVLLGYFGESL 392
Query: 441 VFPC 444
PC
Sbjct: 393 DEPC 396
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 220/416 (52%), Gaps = 60/416 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 706 LKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------------V 751
Query: 99 ILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G+ R ISP+LS +L + K ++ G + Q + I+S T + +
Sbjct: 752 VTSGSTRGVTIVISPLLSLMQDQVSHLNRLNIKAYLLNGETPKEQRQWILS----TLSGS 807
Query: 154 ILEELRLVKPRIKLLYVTPE-----RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ EE I+LLY+TPE +A+T+S L+ L R KLA IV+DEAHCVS+WG
Sbjct: 808 MAEE------DIELLYITPEMVNKSQAITKS----LEKLNRSRKLARIVIDEAHCVSQWG 857
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y+ LGELR Q G +P++ALTATA +VK D+I L+ +VF S R N
Sbjct: 858 HDFRPDYKELGELRNQLPG--VPMMALTATATENVKVDVIHNLRMEG-CEVFSQSFNRPN 914
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y+V + A + + I K + AN GI+YC +R+ +A LR
Sbjct: 915 LTYEVRIKKKGTELLASIADTI-----KTSYANKSGIVYCLSRKTCEKVASGLRDDYRIK 969
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ ER+++Q+ + G +VI ATI+FGMGID+ +VRFV+H +P S+ YYQ
Sbjct: 970 AEHYHAGMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1029
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG +S C +Y+ ++ +I +K +Q + + ++++YCE
Sbjct: 1030 ETGRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSK-QQKNRQRQMLHNVVQYCE 1084
>gi|313677434|ref|YP_004055430.1| ATP-dependent DNA helicase recQ [Marivirga tractuosa DSM 4126]
gi|312944132|gb|ADR23322.1| ATP-dependent DNA helicase RecQ [Marivirga tractuosa DSM 4126]
Length = 725
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 209/401 (52%), Gaps = 53/401 (13%)
Query: 31 VSEQELT--AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
+ EQE T KLK +FG++ F+ ++ I L+ + FV MPTGA + + A S
Sbjct: 2 IEEQEATLKEKLKEVFGYNQFRG--NQELIMQNLINGKNTFVIMPTGAGKSLCYQLPAIS 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
R G + +SP+++ L T + G + + + S TK
Sbjct: 60 R----EGTALV-----------VSPLIA---LMKNQVDTLVALGVNAAF----LNSTLTK 97
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
TE K + +E+ + +KLLYV PE E L+ +++ +DEAHC+SEWG
Sbjct: 98 TETKRVKKEV--MSGNLKLLYVAPESLTKEENVEFLKQA----NISFAAIDEAHCISEWG 151
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YRR+ + Q N IPIIALTATA P V+ DI L + VFK+S R NL
Sbjct: 152 HDFRPEYRRIKSILQQISN-IPIIALTATATPKVQLDIQKNLNMEEA-NVFKSSFNRENL 209
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V + K + F+ + GK CG+IYC +R+ ++A+ L
Sbjct: 210 YYEVRPKNQAK---KQLIRFLNERKGK------CGVIYCLSRKKVEEIAEFLNVNGFNAA 260
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ R + Q+ F+ ++++I ATI+FGMGID+ +VRFV+H+ P S+ YYQE+
Sbjct: 261 PYHAGLEGATRMKNQDDFLNEDVDIIVATIAFGMGIDKPDVRFVIHYDTPKSVEGYYQET 320
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLEL 419
GRAGRDGL C +++S + LE K T++E +L
Sbjct: 321 GRAGRDGLVGDCLMFYSYNDILKLEKFNKDKPVTEKENAKL 361
>gi|373111502|ref|ZP_09525757.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|423131855|ref|ZP_17119530.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|423135590|ref|ZP_17123236.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|423330145|ref|ZP_17307945.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
gi|371640169|gb|EHO05774.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|371640694|gb|EHO06290.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|371640856|gb|EHO06450.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|404602617|gb|EKB02313.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
Length = 731
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 207/384 (53%), Gaps = 47/384 (12%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K +E +L +LK FGF FK LQ+ ++ I+ H+ FV MPTG +S
Sbjct: 2 KSTEIDLHKELKRFFGFSQFKG-LQEDVVKSII-SGHNTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G +SP+++ ++ +I + S+ ++ S TKT
Sbjct: 51 CYQLPA--LVLEGTAIV----VSPLIA----LMKNQVDAIRSLSSEHGVAHVLNSSLTKT 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + E+++ KLLYV PE E + LQ KL+++ +DEAHC+SEWGH
Sbjct: 101 EIAQVKEDIK--SGITKLLYVAPESLTKEEYVSFLQG----EKLSFVAIDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + + G+ IPII LTATA P V++DI+ L+ FK S R NLF
Sbjct: 155 DFRPEYRNLRNIIRSLGD-IPIIGLTATATPKVQEDILKNLEIPNA-NTFKASFNRPNLF 212
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y++ K+ + FI++ GK G+IYC +R+ ++A+ L+
Sbjct: 213 YEI--RPKTKNVETDIIRFIKQHQGK------SGVIYCLSRKKVEEIANVLQVNGISAVP 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VR+V+H +P S+ +YYQE+G
Sbjct: 265 YHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C Y+S + LE
Sbjct: 325 RAGRDGGEGHCLAYYSYKDIEKLE 348
>gi|258513377|ref|YP_003189599.1| RecQ familyATP-dependent DNA helicase [Desulfotomaculum acetoxidans
DSM 771]
gi|257777082|gb|ACV60976.1| ATP-dependent DNA helicase, RecQ family [Desulfotomaculum
acetoxidans DSM 771]
Length = 793
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 219/418 (52%), Gaps = 66/418 (15%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL A LK F F+ F+ Q++ I ++L D+ MPTG +S P
Sbjct: 2 ELKAALKKYFNFEQFRAG-QREVIEYVL-NKQDVLAVMPTG---------QGKSLCYQLP 50
Query: 95 GADFILNGNVRSRNGWISPILS-------SFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
F+L+G ISP+++ S + + D+ +++ + D + ++G
Sbjct: 51 A--FMLSGTTLV----ISPLVALMKDQVDSLWAK-NLDQVTLINSQIDFIDYQERMTG-- 101
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
+ + KL+Y+ PER F ++ L R KL +V+DEAHC+S+W
Sbjct: 102 ------------ISQGNYKLVYIAPERLRNSRF---IEQLSRI-KLDLLVIDEAHCLSQW 145
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP Y + + Q I+ALTATA P V+QDI+ L + K+ + + R N
Sbjct: 146 GHDFRPDYLNIKDFYQNLNYRPTILALTATATPMVQQDILHYLDIPRA-KLINSGSDRPN 204
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV--- 324
L+ ++I D KD ++E ++ N+ +N GIIY TR+ + L+ L R +
Sbjct: 205 LYMEIIRVDKEKDKLPALRETLK------NQRDN-GIIYAATRKDSEWLSVWLARHLGIK 257
Query: 325 --------NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
NK ERSRVQE F+ G+IN + AT +FGMGID+ N+RFV+H+ +P+S+ AYYQ
Sbjct: 258 TACYHAGLNKDERSRVQEDFLGGKINTVVATNAFGMGIDKPNIRFVIHYCLPASLEAYYQ 317
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
E GRAGRD L S C + ++ K+ E++I D KR+ L + ++ ++ EY + G
Sbjct: 318 EIGRAGRDNLPSRCTLIYAAKDKQLQEWIIDNDV-IKRDDLVVFWR---ALKEYMQNG 371
>gi|311746386|ref|ZP_07720171.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
gi|126575272|gb|EAZ79604.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
Length = 725
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 214/412 (51%), Gaps = 51/412 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+++ LK +FGF F+ ++ I LL + FV MPTGA G + + +
Sbjct: 2 EEKVKEDLKKIFGFSQFRG--NQEPIVDNLLGHRNTFVIMPTGA----GKSLCYQLPAVV 55
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ + + L S TK +N+
Sbjct: 56 SNGTAIV-----------ISPLIA--LMKNQVDQLKAIGINAHFLNSTLNKSESTKVKNE 102
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++ + KLLYV PE E L+ +L+++ +DEAHC+SEWGHDFR
Sbjct: 103 -------VLSKKTKLLYVAPESLTKEENIAFLKSA----ELSFVAIDEAHCISEWGHDFR 151
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ + ++PIIALTATA P V+QDI L+ + +FK+S R+NLFY+V
Sbjct: 152 PEYRKIKTIVAQIAPNLPIIALTATATPKVQQDIQRNLQMEEA-DLFKSSFNRTNLFYEV 210
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-RKVNKHE--- 328
+ +S + +FI+ GK GIIYC +R+ ++A L+ ++N
Sbjct: 211 -RPKMKNESKKQLIKFIKNHKGK------SGIIYCLSRKKVEEIAQLLQVNQINAAPYHA 263
Query: 329 ------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
R + Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 264 GLDSAIRIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
RDGL+ +C +++ LE K T+RE + M Y E G
Sbjct: 324 RDGLEGHCLMFYRYEDIVKLEKFNKDKPVTERENARVLLH---EMAAYAETG 372
>gi|393784306|ref|ZP_10372471.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392666082|gb|EIY59599.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 601
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 211/403 (52%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG++SF+ LQ++ I+++L R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYESFR-PLQEEIIQNLLDR-KDSLVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T R++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVETLRANGIAAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ +TE + +L+R L+ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGKLKLLYISPEKLITE-----IDYLLRDMHLSLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q + IPIIALTATA+ ++DII L P KVF +S R NL V K
Sbjct: 154 ILHQVFPH-IPIIALTATADKITREDIIRQLHLTDP-KVFISSFDRPNLSLAVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + EFI D A CGIIYC +R T +A L++ ++ +R
Sbjct: 212 EKSRTILEFI------DRHAGECGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSTQQR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DATQDDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 TLLFYSLG-----DLILLTKFATESNQQSINLEKLQRMQQYAE 363
>gi|296089753|emb|CBI39572.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/425 (34%), Positives = 215/425 (50%), Gaps = 71/425 (16%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +F+ LQ +A + + + D FV MPTG G + + + PG +
Sbjct: 167 IFGNRTFR-PLQHQACKASVTK-RDCFVLMPTGG----GKSLCYQLPATLQPGVTVV--- 217
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL-YQLELIVSGQTKTENKAILEELRLV 161
+ P+LS + I+T + + S QT ++ A+L+ELRL+
Sbjct: 218 --------VCPLLSLI-------QDQIITLNLNFGIPATFLSSQQTASQAAAVLKELRLL 262
Query: 162 -------------------KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEA 201
KP KLLYVTPER A +F +L+ L +LA VVDEA
Sbjct: 263 FPGICFQNCYLLLSFEVKDKPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEA 322
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK-VFK 260
HCVS+WGHDFRP YR LG L+Q +P++ALTATA V++DI++ L+ P+ V +
Sbjct: 323 HCVSQWGHDFRPDYRELGCLKQ-NFPDVPVMALTATATQPVRKDILNSLRI--PHALVLE 379
Query: 261 TSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKC--LGKDNKANNCGIIYCRTREHTTDLAD 318
TS RSNL Y+VI KE +++ L KD N CGI+YC ++ +++
Sbjct: 380 TSFDRSNLKYEVI---------GKTKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSK 430
Query: 319 ALRRK-----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGM 367
L K ++ +R VQ+ + G++++I ATI+FGMGI++ NVRFV+H M
Sbjct: 431 FLNGKCKIKTVYYHAGLSARQRIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTM 490
Query: 368 PSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSM 427
SI YYQESGRAGRD L + C + + + +++ K E + M
Sbjct: 491 SKSIENYYQESGRAGRDDLPAVCMALYQKKDFSRVVCMLRNGHGCKSETFKEAMTQARKM 550
Query: 428 LEYCE 432
+YCE
Sbjct: 551 QQYCE 555
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/411 (32%), Positives = 213/411 (51%), Gaps = 50/411 (12%)
Query: 39 KLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADF 98
KLK +FGF F+ ++ I +L + FV MPTGA G + + I G
Sbjct: 8 KLKKIFGFSQFRG--NQEPIVDNILGQKNTFVIMPTGA----GKSLCYQLPAVIQEGTAI 61
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL 158
+ ISP+++ K + + + S K+E + +E
Sbjct: 62 V-----------ISPLIALM-------KNQVDQLNAFGINAHFLNSTLNKSETNKVKKE- 102
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
++ + KLLYV PE E L+ KL+++ +DEAHC+SEWGHDFRP YR++
Sbjct: 103 -VLSGKTKLLYVAPESLTKEENILFLKDA----KLSFVAIDEAHCISEWGHDFRPEYRKI 157
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
+ G +PIIALTATA P V+QDI L+ + +FK+S R+NL+Y+ I L
Sbjct: 158 KSIIAQLGKELPIIALTATATPKVQQDIQRNLQMEEA-DLFKSSFNRTNLYYE-IRPKLK 215
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
++ + ++I+ GK GIIYC +R+ ++A+ L+ +++
Sbjct: 216 NETKKQIIKYIKSQKGK------SGIIYCLSRKKVEEIAELLKVNGIKAAPYHAGLDQSV 269
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGRDGL+
Sbjct: 270 RIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE--YCEQGYFL 437
+C +++ LE K T+RE ++ + + E C + + L
Sbjct: 330 HCLMFYRYEDIIKLEKFNKDKPVTERENAKILLQEMAAYAESSICRRKFLL 380
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 211/417 (50%), Gaps = 56/417 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ FG F+ Q +AI LL D FV MPTG G + + +
Sbjct: 632 QEMMKIFHKRFGLHQFRFN-QLEAINAALL-GEDAFVLMPTGG----GKSLCYQLPACVS 685
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG----QTKT 149
PG + +SP+ K+ IV L L++ + ++ +
Sbjct: 686 PGVTVV-----------VSPL-----------KSLIVDQIQKLTTLDIPATSLSGDKSDS 723
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L P IKLLYVTPE+ + + LQ+L LA ++DEAHCVS+WG
Sbjct: 724 EAGRIYMQLSRKDPLIKLLYVTPEKVSASGRLISALQNLYERGLLARFIIDEAHCVSQWG 783
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP ++RL ELRQ S+ ++ALTATA P V++DI++ L +P +VF S RSNL
Sbjct: 784 HDFRPDFKRLHELRQ-KFPSVRMMALTATATPRVQKDILNQLNMMRP-QVFTMSFNRSNL 841
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK--- 323
Y V+ K+ E C+G K + + GI+YC +R +A++L+R
Sbjct: 842 KYSVL--------PKKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDAMAESLKRAGIQ 893
Query: 324 -------VNKHERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ +R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ YY
Sbjct: 894 ALSYHAGLSDGDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYY 953
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QESGRAGRDG S+C +++S ++ +I D F N SM+ +CE
Sbjct: 954 QESGRAGRDGEISHCILFYSYTDVHRIKRIISMDREGDSHTKATHFNNLHSMVHFCE 1010
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 206/399 (51%), Gaps = 61/399 (15%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L A LK FG+DSF+ +K I L+ D + MPTG G + + +
Sbjct: 5 QSLEAALKHYFGYDSFRPG--QKQIVEQALQNRDQLIVMPTGG----GKSLCFQLPALLQ 58
Query: 94 PGADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
PG + +SP+++ LR + + +L+Q+ +
Sbjct: 59 PGLTVV-----------VSPLIALMQDQVEALRDNGIGATFLNSSLNLHQV--------R 99
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +AIL + KLLYV PER + E F L + +A +DEAHCVSEWG
Sbjct: 100 SREQAIL------SGKTKLLYVAPERLLNEKFLPFLDLIREKIGIAAFAIDEAHCVSEWG 153
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP YR+L +LRQ + G +P +ALTATA V+QDII L ++P + S R N
Sbjct: 154 HDFRPEYRQLKQLRQRYPG--VPTLALTATATDRVRQDIIQQLGLSQP-SIHIASFNRPN 210
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L+Y+V K SY+ + + I + G GI+YC +R ++A L++
Sbjct: 211 LYYEV--QPKQKQSYSQLLQIIRQSEGS-------GIVYCLSRRKVDEIAFKLQQDKIAA 261
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ ER+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H +P +I YYQE
Sbjct: 262 LPYHAGLSDTERAENQTRFIRDDVRVMVATIAFGMGINKPDVRFVIHHDLPRNIEGYYQE 321
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
SGRAGRDG + C ++ K++EY+I KTD +R
Sbjct: 322 SGRAGRDGETARCTLFLGYGDIKTIEYLIDQKTDLQGQR 360
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 203/393 (51%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ Q+ I L+ D+ + MPTG G + + + PG
Sbjct: 15 LEQALKHFFGYDSFRPGQQE--IVEAALQKRDMMIVMPTGG----GKSLCFQLPALLKPG 68
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENKA 153
+ +SP+++ D+ + G + + S +T++ A
Sbjct: 69 LTVV-----------VSPLIA-----LMQDQVEALQDNGIGATFLNSTLSSQETRSRETA 112
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
ILE +IKLLYV PER + E F L + ++ +DEAHCVSEWGHDFRP
Sbjct: 113 ILEG------KIKLLYVAPERLLGERFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRP 166
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ +R + IPI+ LTATA V+QDII L PY + S R NL+Y+V
Sbjct: 167 EYRQMQRVRDRYPD-IPIMGLTATATERVRQDIIQQLTLRNPY-IHVASFNRPNLYYEV- 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K S+A V + I+K G GIIYC +R+ ++A L++
Sbjct: 224 -RPKTKHSFAEVLQIIKKKGGS-------GIIYCLSRKKVDEVAYKLQQSGIQALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+N +R+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGR
Sbjct: 276 MNDVDRATNQTRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
D ++C ++ K ++Y+I K D +R
Sbjct: 336 DNEPAHCSLFFGYGDVKMIDYIIEQKPDPQEQR 368
>gi|86140388|ref|ZP_01058947.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85832330|gb|EAQ50779.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 733
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 203/381 (53%), Gaps = 46/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L A LK FGF FK LQ+ I+ I+ H FV MPTG G + + I
Sbjct: 5 EIDLHASLKKYFGFSQFKG-LQEDVIKSIIEGKH-TFVIMPTGG----GKSLCYQLPALI 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ + D ++ + + + + S K E K
Sbjct: 59 KEGTAIV-----------VSPLIA--LMKNQVDALRGISKENGIAHV--LNSSLNKGEIK 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E++ KLLYV PE E L R K++++ +DEAHC+SEWGHDFR
Sbjct: 104 QVKEDI--ANGITKLLYVAPESLTKEENVEFL----RSQKISFVAIDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR L ++ + G+ IPIIA+TATA P V++DI+ L + FK S R NL+Y++
Sbjct: 158 PEYRNLRQIIKRIGDDIPIIAVTATATPKVQEDIMKNLGMSGA-NAFKASFNRPNLYYEI 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------R 322
K+ A + F+++ GK GIIYC +R+ +LA L+
Sbjct: 217 --RPKTKNVDADIIRFVKQNQGK------SGIIYCLSRKRVEELAQVLQVNGISAVPYHA 268
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R + Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAG
Sbjct: 269 GLDAKSRVKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 328
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C Y+S + LE
Sbjct: 329 RDGGEGHCLAYYSYKDIEKLE 349
>gi|427722202|ref|YP_007069479.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
gi|427353922|gb|AFY36645.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
Length = 715
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 208/412 (50%), Gaps = 58/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FG++SF+ +K + L+ D+ MPTGA G + + + G
Sbjct: 7 LEAALKHFFGYESFRP--GQKTVIEAALQNRDVLALMPTGA----GKSICFQLPALLKSG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT--GRSDLYQLELIVSGQTKTENKA 153
+ ISP+++ D+ +T G + + Q ++ +A
Sbjct: 61 LTVV-----------ISPLIA-----LMQDQVDSLTDNGIGATFLNSTLNLNQARSRIQA 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
IL +IKLLYV PER E F L + L+ VVDEAHCVSEWGHDFRP
Sbjct: 105 IL------NGKIKLLYVAPERLFNEGFQEFLNDVTDSVGLSGFVVDEAHCVSEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDV 272
YR+L LR+ +P A TATA V+QDII+ L + P F ++F R NL+Y+V
Sbjct: 159 EYRQLARLRR-NYPQVPCHAFTATATERVRQDIITQLALHTP--SFHCTSFNRPNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
I SY V ++ K GK GIIYC +R+ +++D L+
Sbjct: 216 IPKS--SRSYDQVLKYTRKHRGKS------GIIYCSSRKKVDEISDRLKNDGINALPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R+ Q+ F+R ++ VI ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAG
Sbjct: 268 GMSDKARASHQDQFIRDDVPVIVATIAFGMGINKPDVRFVLHYDLPGNLERYYQESGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKREQLELKFKNYLSMLEYCE 432
RD + C + +S K EY I K D KR + ++ M++Y E
Sbjct: 328 RDNEPADCALLYSVGDIKKAEYFIELKDDEQEKR----VAYQQLQKMIDYAE 375
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 212/416 (50%), Gaps = 54/416 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG +F+ Q +AI LL D F+ MPTG G + + +
Sbjct: 644 KEMMKIFRKKFGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVS 697
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ ++ IV L ++ + +T +
Sbjct: 698 PGVTIV-----------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDS 735
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L P IKLLYVTPE+ + L++L LA V+DEAHCVS+WG
Sbjct: 736 EAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWG 795
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFR Y+R+ LRQ F S+P++ALTATA P V++DI++ LK +P +VF S R N
Sbjct: 796 HDFRQDYKRMNMLRQRFP--SVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHN 852
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y V+ K + + E+I K D+ GIIYC +R+ +AD L+R+
Sbjct: 853 LKYYVLPKKPKKVALDCL-EWIRKHHPYDS-----GIIYCLSRKECDTMADTLQREGLAA 906
Query: 324 ------VNKHERSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R VQ ++ + VI ATI+FGMGID+ +VRFVVH +P S+ YYQ
Sbjct: 907 LAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQ 966
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
ESGRAGRDG S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 967 ESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTRETHVNNLYSMVHYCE 1022
>gi|357445423|ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 1156
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 214/417 (51%), Gaps = 52/417 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL K +FG SF+ ++ + + + D+FV MPTG G ++ + I
Sbjct: 394 KELEVNNKKVFGNHSFR--PNQREVINATMSGCDVFVLMPTGG----GKSLTYQLPALIN 447
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S + + + LE E +
Sbjct: 448 PGITLV-----------ISPLVSLIQDQIMHLLQANIPAAYLSANLEW-------AEQQE 489
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL EL + KLLYVTPE+ A ++ L+ L L+ IV+DEAHCVS+WGHDFR
Sbjct: 490 ILRELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFR 549
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ LG L+Q N+ P++ALTATA SVK+D++ L VF+ S R NL+Y V
Sbjct: 550 PDYQGLGVLKQKFPNT-PVLALTATATASVKEDVVQALGLVNCV-VFRQSFNRPNLWYSV 607
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------- 322
+ K + +FI ++N + CGIIYC +R +A+ L+
Sbjct: 608 V--PKTKKCLEDIDKFI-----RENHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHG 660
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +R+ VQ + + EIN+I AT++FGMGI++ +VRFV+H +P S+ Y+QE GRAG
Sbjct: 661 SMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQECGRAG 720
Query: 383 RDGLQSYC-RIYHS------EHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG +S C R+ H E S + Y T++ R LE +N L M+ YCE
Sbjct: 721 RDGQRSSCIRVKHMLSVGAVEQSNMTSGYSRFNATNSGR-LLETNTENLLRMVSYCE 776
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 212/416 (50%), Gaps = 54/416 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG +F+ Q +AI LL D F+ MPTG G + + +
Sbjct: 644 KEMMKIFRKKFGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVS 697
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ ++ IV L ++ + +T +
Sbjct: 698 PGVTIV-----------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDS 735
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L P IKLLYVTPE+ + L++L LA V+DEAHCVS+WG
Sbjct: 736 EAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWG 795
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFR Y+R+ LRQ F S+P++ALTATA P V++DI++ LK +P +VF S R N
Sbjct: 796 HDFRQDYKRMNMLRQRFP--SVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHN 852
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y V+ K + + E+I K D+ GIIYC +R+ +AD L+R+
Sbjct: 853 LKYYVLPKKPKKVALDCL-EWIRKHHPYDS-----GIIYCLSRKECDTMADTLQREGLAA 906
Query: 324 ------VNKHERSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R VQ ++ + VI ATI+FGMGID+ +VRFVVH +P S+ YYQ
Sbjct: 907 LAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQ 966
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
ESGRAGRDG S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 967 ESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTRETHVNNLYSMVHYCE 1022
>gi|333029342|ref|ZP_08457403.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332739939|gb|EGJ70421.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 727
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A+LK FGFD FK ++AI LL +D FV MPTG +S P
Sbjct: 7 LKAELKEYFGFDKFKG--NQEAIIKNLLAGNDTFVLMPTGG---------GKSLCYQLPS 55
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+L G +SP+++ K + RS +++ + + NK+ +
Sbjct: 56 --ILLEGTAIV----VSPLIALM-------KNQVDAMRS-FSEIDGVAHYINSSLNKSEI 101
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E+++ LV + KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 102 EQVKEDLVSGKTKLLYVAPESLTKEDNVDFLKSI----KISFYAVDEAHCISEWGHDFRP 157
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + G + P+IALTATA P V+ DI L KVFK+S R NL+Y+V
Sbjct: 158 EYRRIRPIIDEIGKA-PLIALTATATPKVQHDIQKNLGIVDA-KVFKSSFNRPNLYYEVK 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
KD V FI+ N N GIIYC +R+ +L L+
Sbjct: 216 AK--TKDVDKDVILFIK------NNPNKSGIIYCLSRKKVEELTKILQANGINARSYHAG 267
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ ++VI ATI+FGMGID+ +VRFV+H+ MP S+ YYQE+GRAGR
Sbjct: 268 MDAATRNQNQDDFLMERVDVIVATIAFGMGIDKPDVRFVLHYDMPKSLEGYYQETGRAGR 327
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C ++S + LE ++ ++E
Sbjct: 328 DGGEGKCVTFYSNKDLQKLEKFMQGKPVAEQE 359
>gi|429750375|ref|ZP_19283426.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429165304|gb|EKY07364.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 727
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 208/383 (54%), Gaps = 46/383 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+++ +L + LK FGF+SFK ++ I ++ + FV MPTG +S
Sbjct: 1 MTKDDLHSALKHYFGFESFKG--HQEEIITSVINKENTFVIMPTGG---------GKSLC 49
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P +L G ISP+++ ++ + D ++ + + + S TK E
Sbjct: 50 YQLPA--LVLEGTAIV----ISPLIA--LMKNQVDAMRGISSTDSIAHV--LNSSLTKNE 99
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ ++E++ + KLLYV PE + E + L+ + ++++ VDEAHC+SEWGHD
Sbjct: 100 IREVMEDIS--NGKTKLLYVAPESLIKEEYANFLKTV----PISFVAVDEAHCISEWGHD 153
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR + + + G +IPI+ALTATA P V++DI+ L VFK+S R NL+Y
Sbjct: 154 FRPEYRNIKTIIERLGTNIPIVALTATATPKVQEDILKNLAMTDA-NVFKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+ A + F+++ K GIIYC +R+ +L L+
Sbjct: 213 EV--RPKTKNVDADIIRFVKQNPKK------SGIIYCLSRKKVEELTQTLQVNGISAVPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GR
Sbjct: 265 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C ++S + LE
Sbjct: 325 AGRDGGEGHCLAFYSYKDVEKLE 347
>gi|325300153|ref|YP_004260070.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324319706|gb|ADY37597.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 727
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/401 (35%), Positives = 207/401 (51%), Gaps = 69/401 (17%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
L A+LK FGFD+FK ++AI LL D FV MPTG + S++ + +
Sbjct: 7 LAAQLKKYFGFDTFKG--NQEAIIRNLLAGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS K++I ++D I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNYSEEDGVAHFINSSLT------KSAIDQVKAD------ILAGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+H+ K+++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVEFLKHV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P VK DI L + FK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVKMDIQKNLGMTDAVE-FKSSFNRP 208
Query: 267 NLFYDVIFD--DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
NL+Y+V ++ KD +K+ EK GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEVRSKTVNIDKDIIRFIKQNPEKS----------GIIYCLSRKKVEELAEILQANG 258
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ R+ Q++F++ +I+VI ATI+FGMGID+ +VRFV+H+ MP S+ Y
Sbjct: 259 IKARPYHAGMDSATRNANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDMPKSLEGY 318
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YQE+GRAGRDG + C ++S + LE ++ +++E
Sbjct: 319 YQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVSEQE 359
>gi|124004539|ref|ZP_01689384.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123990111|gb|EAY29625.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 728
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 220/414 (53%), Gaps = 54/414 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
VS+ +L KLK +FG+ F+ Q++ I+ IL + FV MPTGA G + +
Sbjct: 4 VSKLDLKEKLKEVFGYGQFRG-AQQEIIKSIL-GEKNTFVIMPTGA----GKSLCYQLPA 57
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ PG+ + ISP+++ ++ + D+ + + G + + + G+
Sbjct: 58 IVSPGSAIV-----------ISPLIA--LMKNQVDQLNAL-GINAQFLNSTLTKGEITRV 103
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K +L +KLLYV PE ES L+ +++++ +DEAHC+SEWGHD
Sbjct: 104 KKDVL------NGEVKLLYVAPESLTKESNVDFLKKA----QISFVAIDEAHCISEWGHD 153
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR++ ++ GN +PIIALTATA P V+QDI L+ VFK+S R NL+Y
Sbjct: 154 FRPEYRKIRQIIDNLGN-LPIIALTATATPKVQQDIQRNLQMEDA-SVFKSSFNRPNLYY 211
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V HVK+ + K L NK GIIYC +R+ ++ + L+
Sbjct: 212 EV-------RPKIHVKKQLIKYLK--NKKGESGIIYCLSRKKVEEIYEFLKVNDIKALPY 262
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R R Q++F+ + ++I ATI+FGMGID+ +VR V+H+ P S+ YYQE+GR
Sbjct: 263 HAGLDSSVRMRNQDAFLNEDADIIVATIAFGMGIDKPDVRCVIHYDAPKSLEGYYQETGR 322
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
AGRDGL + C +++S + + LE K T+R+ + M++Y G
Sbjct: 323 AGRDGLNADCIMFYSPNDIQKLEKFNKDKPVTERDNARHLLQ---EMMDYATSG 373
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 209/406 (51%), Gaps = 55/406 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
+ +FG + F+ Q +A+ LL HD F+ MPTG G + + + PG +
Sbjct: 5 FRTIFGLNEFR-HNQLQAVNAALL-GHDCFILMPTGG----GKSLCYQLPALVTPGVTLV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+ S +D + + L VS + +L +
Sbjct: 59 -----------ISPLRS----LIQDQVQRLCSLDVPATHLSSDVSPAQANQTFMLLHQ-- 101
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P +KLLY+TPE+ V + + +L++L R LA ++DEAHCVS+WGHDFRP Y++L
Sbjct: 102 -KIPPVKLLYLTPEKIVASAKLNSVLENLYRRKMLARFIIDEAHCVSQWGHDFRPDYKKL 160
Query: 219 GELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LR+ F G +P+IA+TATA P V++DI+ L N P K F S R NL Y+V L
Sbjct: 161 NGLRERFPG--VPMIAVTATATPRVRKDILHQLGMNSP-KWFMQSFNRVNLKYEV----L 213
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREH----TTDL------ADALRRKVNKH 327
K + + I + +N GI+YC +R +TDL A A +
Sbjct: 214 PKKPKSLTSDVIN--MIHSRFSNQSGIVYCLSRRECDTVSTDLTKAGIQAKAYHAGLTDA 271
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+RS VQ+ ++ + V+ ATI+FGMGID+ +VRFVVH+ +P SI YYQESGRAGRDG+
Sbjct: 272 QRSSVQQKWLNEDGCKVVCATIAFGMGIDKPDVRFVVHYSLPKSIEGYYQESGRAGRDGI 331
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C +++S L +I++ E+ N M+ YCE
Sbjct: 332 LATCVLFYSYSDVSRLRRMIES---------EVHLDNLFRMINYCE 368
>gi|336398037|ref|ZP_08578837.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
gi|336067773|gb|EGN56407.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
Length = 740
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 205/402 (50%), Gaps = 61/402 (15%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRV 90
+LT LK FGFD+FK + ++AI L+ +D FV MPTG + S++ + +
Sbjct: 4 DLTEALKKYFGFDTFKGD--QRAIITNLMEGNDTFVLMPTGGGKSLCYQLPSLLMEGTAI 61
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ P + N V NG+ + YL ++ +I SD+ +
Sbjct: 62 VVSPLIALMKN-QVDVINGYSEDDSVAHYLNSSLNRAAINHVESDVRE------------ 108
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
R KLLYV PE E Q K+++I VDEAHC+SEWGHD
Sbjct: 109 ------------GRTKLLYVAPESLNKEDNLSFFQSF----KISFIAVDEAHCISEWGHD 152
Query: 211 FRPTYR-------RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
FRP YR ++ + RQ IP+IALTATA V+ DI + L K FK+S
Sbjct: 153 FRPEYRNIKPTIDKIAKARQV--EHIPVIALTATATDKVRMDIKTNLGMADA-KEFKSSF 209
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL--- 320
R NL+Y+V +D+ + + +FI++ GK GIIYC +R+ +LA L
Sbjct: 210 NRPNLYYEVRQKVSDEDTDSQIIKFIKQHSGK------SGIIYCLSRKKVEELAKKLCLN 263
Query: 321 -------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ R+R Q+ F++ I++I ATI+FGMGID+ +VRFV+H+ +P S+
Sbjct: 264 GFRAAPYHAGLDNEVRARTQDDFLKENIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEG 323
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YYQE+GRAGRDG + C ++S K L + + + T++E
Sbjct: 324 YYQETGRAGRDGGEGICLAFYSPKDLKKLSKFMDSKSETEKE 365
>gi|304383399|ref|ZP_07365865.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
gi|304335567|gb|EFM01831.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
Length = 726
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 206/383 (53%), Gaps = 51/383 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E LT KLK FGFD FK + Q+ IR+ LL +D FV MPTG +S
Sbjct: 5 EMNLTGKLKQYFGFDKFKGD-QEAIIRN-LLDGNDTFVLMPTGG---------GKSLCYQ 53
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P I++G ISP+++ ++ ++ G S + E + + NK
Sbjct: 54 LPS--LIMDGMAI----VISPLIA-----LMKNQVDVINGIS---EEEGVAHYLNSSLNK 99
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
A ++ ++ ++ + KLLYV PE E + L+ + K+++ +DEAHC+SEWGHD
Sbjct: 100 ASIDHVKADILCGKTKLLYVAPESLTKEEYVSFLKGV----KISFYAIDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YRR+ L G + P+IALTATA V+ DI L K FK+S R NL+Y
Sbjct: 156 FRPEYRRIRPLINEIGIA-PVIALTATATDKVRTDIKKNLGIADA-KEFKSSFNRPNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---------- 320
+V +D + +FI + GK GI+YC +R+ +LA L
Sbjct: 214 EVRAK--TQDIDKQIIKFIRQHQGK------SGIVYCLSRKTVEELAAVLCANDIKAAPY 265
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +RS+ Q++F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GR
Sbjct: 266 HAGLDSAKRSQTQDAFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGR 325
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + C ++S + + LE
Sbjct: 326 AGRDGGEGLCITFYSNNDLRKLE 348
>gi|281425296|ref|ZP_06256209.1| hypothetical protein HMPREF0971_02268 [Prevotella oris F0302]
gi|281400589|gb|EFB31420.1| ATP-dependent DNA helicase RecQ [Prevotella oris F0302]
Length = 725
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 198/382 (51%), Gaps = 55/382 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGF+ FK + Q+ IR+ LL HD FV MPTG + S++ + +
Sbjct: 7 LTQQLKHYFGFNKFKGD-QEAIIRN-LLEGHDTFVLMPTGGGKSLCYQLPSLIMEGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + N V NG I + YL +K +I
Sbjct: 65 ISPLIALMKN-QVDVINGLSEEIGVAHYLNSSLNKAAI---------------------- 101
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++++R R KLLYV PE E LQ + K+++ +DEAHC+SEWGHDF
Sbjct: 102 QQVMDDVR--SGRTKLLYVAPESLNKEENVEFLQSV----KVSFYAIDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR + G + PIIALTATA V+ DI L K FK+S R+NL+Y+
Sbjct: 156 RPEYRNIRPTINKIGTA-PIIALTATATDKVRSDIKKSLGITDA-KEFKSSFNRANLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V D + +FI + GK GIIYC +R+ +LA+ L+
Sbjct: 214 V--RPKTNDVDKQIIKFIRQHEGK------SGIIYCLSRKKVEELAEVLKANEIKAAPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C ++++ K LE
Sbjct: 326 GRDGGEGLCIAFYAQKDLKKLE 347
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/392 (34%), Positives = 201/392 (51%), Gaps = 49/392 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK FG DSF+ ++ I L+ D+ + MPTG
Sbjct: 14 QLERSLKHFFGHDSFRP--GQREIVEAALQNRDLLIVMPTGG------------------ 53
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G R G I+ ++S +D S+ +++ + S + E+++
Sbjct: 54 GKSLCFQLPALLRKG-ITVVVSPLIALMQDQVESL---KNNGIACTFLNSTLSWEESRS- 108
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
E +++ IKLLYV PER ++E F + + ++ +DEAHCVSEWGHDFRP
Sbjct: 109 -RETAILQGEIKLLYVAPERLLSERFLPFMDLVRAQVGISGFAIDEAHCVSEWGHDFRPE 167
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR++ LRQ IP++ALTATA V+QDI L P K+ S R NL+Y+V
Sbjct: 168 YRQMQLLRQRY-PEIPMMALTATATDRVRQDITQQLALRDP-KIHIASFNRPNLYYEVRQ 225
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ K SY + + I + G GIIYC +R ++A L+R+ +
Sbjct: 226 KN--KQSYRELVKLIRESKGS-------GIIYCLSRRRVDEVAYKLQREGIDAIPYHAGM 276
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
N ERS Q F+R + VI ATI+FGMGI++ +VRFVVH+ +P +I YYQESGRAGRD
Sbjct: 277 NDQERSSNQTRFIRDDAQVIVATIAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRAGRD 336
Query: 385 GLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
G + C ++ K++EY+I KTD +R
Sbjct: 337 GEPANCTMFFGYGDIKTIEYIIDQKTDVDEQR 368
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 675 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 724
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L ++ + +T +E I +L
Sbjct: 725 -------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLS 766
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 767 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 826
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 827 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 884
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R+ ++
Sbjct: 885 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSA 938
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 939 RDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 998
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 999 SHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCE 1043
>gi|163787884|ref|ZP_02182330.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
gi|159876204|gb|EDP70262.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
Length = 733
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 209/384 (54%), Gaps = 48/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++E +L LK FGF +FK LQ++ I++++ ++ FV MPTG G + +
Sbjct: 3 IAEIDLHDSLKKYFGFSAFKG-LQEEVIKNVV-AGNNTFVIMPTGG----GKSLCYQLPA 56
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
I G + +SP+++ ++ + D V+ + + + S KTE
Sbjct: 57 LIKEGTAIV-----------VSPLIA--LMKNQVDAIRAVSDHDGVAHV--LNSSLNKTE 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K + +++ V KLLYV PE E + L R K++++ VDEAHC+SEWGHD
Sbjct: 102 VKRVKDDI--VNGITKLLYVAPESLTKEEYVEFL----RTVKISFMAVDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV-FKTSTFRSNLF 269
FRP YR L + + G+ IPI+ LTATA P V++DI+ L P V FK S R NL+
Sbjct: 156 FRPEYRNLKTIIKRIGDDIPIVGLTATATPKVQEDILKSLGM--PNAVTFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
Y+V K+ A + F+++ GK GI+YC +R+ +LA L+ + V
Sbjct: 214 YEV--RPKTKNVDADIIRFVKQNDGK------SGIVYCLSRKRVEELAQVLQVNGVKAVP 265
Query: 326 KHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H R + Q+ F+ + +V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+G
Sbjct: 266 YHAGLDAKTRVKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C Y++ + LE
Sbjct: 326 RAGRDGGEGHCLAYYAYKDIEKLE 349
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 674 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 723
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L ++ + +T +E I +L
Sbjct: 724 -------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLS 765
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 766 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 825
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 826 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 883
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R+ ++
Sbjct: 884 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSA 937
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 938 RDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 997
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 998 SHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCE 1042
>gi|332882051|ref|ZP_08449686.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357048209|ref|ZP_09109763.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332679975|gb|EGJ52937.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355528792|gb|EHG98270.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 608
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/403 (34%), Positives = 207/403 (51%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FGFDSF+ LQ+ I +IL HD+ V MPTG + V A R G +
Sbjct: 5 LKRYFGFDSFR-PLQEDIIGNILA-GHDVVVLMPTGGGKSLCYQVPALMR----EGTTVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + R++ + S + E+ +
Sbjct: 59 -----------ISPLISLM-------KDQVEGLRANGVPAAALNSMNDEAESARV--RAA 98
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +KLLY++PER + E L +L+R K++ VDEAHC+S+WGHDFRP Y +LG
Sbjct: 99 CLRGELKLLYISPERLMLE-----LPYLIRDMKVSLFAVDEAHCISQWGHDFRPEYAQLG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LRQ T +PI+ALTATA+ ++DI L + P VF +S R NL DV K
Sbjct: 154 LLRQ-TFPDVPIVALTATADRLTREDIQKQLALSDPV-VFISSFDRPNLSLDVKRGYQKK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKVNKHER 329
D + E I + ++CGIIYC +++ T +A+ LR + ER
Sbjct: 212 DKDRAILELIAR------HPDDCGIIYCLSKKTTESVAEMLRGHDIAAVAYHAGLPTEER 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
R Q+ F+ + V+ AT++FGMGID+ NVRFV+H+ +P SI +YQE GRAGRDGL +
Sbjct: 266 ERAQDDFIHDRVQVVCATVAFGMGIDKSNVRFVIHYNLPKSIEGFYQEIGRAGRDGLPAE 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + V + + + Q E+ + M EY E
Sbjct: 326 TVLFYSLG-----DLVQLSKFAQESGQREINMEKLRRMQEYAE 363
>gi|319902947|ref|YP_004162675.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
gi|319417978|gb|ADV45089.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
Length = 603
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 215/404 (53%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ IRH+L R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQETIIRHLLDR-KDALVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T ++ + S +TEN A L L
Sbjct: 59 -----------VSPLISLM-------KDQVETLCANGIAAGALNSNNDETEN-ASLRRL- 98
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 99 CMEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPIIALTATA+ ++DII L N+P K+F +S R NL V
Sbjct: 154 VLHQQFP--QIPIIALTATADKITREDIIKQLHLNQP-KIFISSFDRPNLSLTVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ CGIIYC +R T +A L+++ ++ +
Sbjct: 211 KEKGKAILDFINRHPGE------CGIIYCMSRSKTESVAQMLQKQGIKAAIYHAGLSAAK 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTLLFYS-----LADLILLTKFATESGQQSINIEKLQRMQQYAE 363
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 671 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 720
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L ++ + +T +E I +L
Sbjct: 721 -------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLS 762
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 763 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 822
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 823 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 880
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R+ ++
Sbjct: 881 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSA 934
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 935 RDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 994
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 995 SHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCE 1039
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 205/388 (52%), Gaps = 52/388 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGF+ F+ ++AI +L+ ++ FV MPTGA G + + G +
Sbjct: 9 LKKIFGFNQFRG--NQEAIVDNILQGNNTFVIMPTGA----GKSLCYQLPAVTKEGTAIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ K + + + S +KTE + +E+
Sbjct: 63 -----------ISPLIALM-------KNQVDQLNAFGINAHFLNSTLSKTETNKVKKEV- 103
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ KLLYV PE E L+ +L+++ +DEAHC+SEWGHDFRP YR++
Sbjct: 104 -LSGATKLLYVAPESLTKEENVEFLKSA----QLSFVAIDEAHCISEWGHDFRPEYRKIK 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+ G+++PIIALTATA P V+QDI L + +FK+S R+NLFY+V
Sbjct: 159 SIIAQIGDALPIIALTATATPKVQQDIQRNLNMEEA-DLFKSSFNRTNLFYEV-RPKAKS 216
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVN------------KH 327
D+ H+ ++++ GK GIIYC +R+ ++A+ L KVN
Sbjct: 217 DTKKHLIKYVKSQKGK------SGIIYCLSRKKVEEIAELL--KVNGINAAPYHAGLESA 268
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R + Q+ F+ E++V+ ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGRDGL+
Sbjct: 269 MRIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLE 328
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+C +++ LE K +RE
Sbjct: 329 GHCLMFYKYEDIVKLEKFNKDKPVNERE 356
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 205/406 (50%), Gaps = 46/406 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
K FG +F+ Q + I LL D FV MPTG G + + + G +
Sbjct: 595 FKETFGLRTFRPN-QLQVINATLL-GRDCFVLMPTGG----GKSLCYQLPALLTTGVTIV 648
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEEL 158
+SP+ S + + T + S +SG+ + + + I ++L
Sbjct: 649 -----------VSPLKSLILDQVQKLNTLDIPAGS--------LSGEAQMADVQRIYDDL 689
Query: 159 RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
P +KLLYVTPE+ + + F LL L R +L IV+DEAHCVS WGHDFRP Y+R
Sbjct: 690 YSSCPVLKLLYVTPEKISSSAKFQNLLSALHRRRQLGRIVIDEAHCVSAWGHDFRPDYKR 749
Query: 218 LGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
L LR QF +PIIALTATA V+ D+I+ LK + F +S R NL Y V
Sbjct: 750 LYMLREQFP--DVPIIALTATANTRVRMDVITQLKLQPDTRWFLSSFNRPNLKYLV---- 803
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE-------- 328
L K + E I L K A + GI+YC +++ LA R+ K +
Sbjct: 804 LPKKGASTKGEMIN--LIKAKFARDTGIVYCLSKKECDQLATDFRKAGIKAKSYHAGLTD 861
Query: 329 --RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R Q+ ++ I V+ ATI+FGMGID+ +VR+V+H+ MP SI YYQESGRAGRDG
Sbjct: 862 TIREATQKEWIGDRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGE 921
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C +Y++ + ++ DTS E ++ N L M+ YCE
Sbjct: 922 IATCILYYNYSDMQRYRKMMDNDTSISFEAKQIHMNNLLRMVNYCE 967
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 672 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 721
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L ++ + +T +E I +L
Sbjct: 722 -------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLS 763
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 764 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 823
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 824 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 881
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R+ ++
Sbjct: 882 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSA 935
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 936 RDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 995
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 996 SHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCE 1040
>gi|29653815|ref|NP_819507.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
gi|29541078|gb|AAO90021.1| ATP-dependent DNA helicase [Coxiella burnetii RSA 493]
Length = 601
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 206/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG G + + + G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGG----GKSLCYQIPALVREGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE +A R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAEARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P IALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFIALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIRYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
SY + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KSYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADGYSALPYHAGLPAAQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 205/383 (53%), Gaps = 49/383 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E L LK FGFD+FK E Q+ IRH LL +D FV MPTG +S
Sbjct: 4 EVNLIDNLKHYFGFDNFKGE-QEAIIRH-LLAGYDAFVLMPTGG---------GKSLCYQ 52
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P I+ G +SP+++ ++ ++ G S+ + ++ K K
Sbjct: 53 LPS--LIMEGTAV----VVSPLIA-----LMKNQVDVINGISEGDGVAHYLNSSLK---K 98
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
A ++++R + + + KLLYV PE E L+ + K+++ +DEAHC+SEWGHD
Sbjct: 99 AEVDKVRTDIREGKTKLLYVAPESLNKEDNIEFLKTV----KVSFYAIDEAHCISEWGHD 154
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR++ + G + PIIALTATA V+ DI+ L + F++S R NL+Y
Sbjct: 155 FRPEYRKIRNAIEVIGRA-PIIALTATATAKVRTDIVRSLGIEGCAE-FRSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---------- 320
+V D+ + FI++ GK GIIYC +R+ +LA L
Sbjct: 213 EVRPKKSEDDTNKQIIRFIKQHTGK------SGIIYCLSRKKVEELAAVLLANDIKAAPY 266
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ RS+ Q+ F+ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GR
Sbjct: 267 HAGLDSEVRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + C +++S + K LE
Sbjct: 327 AGRDGEEGICLVFYSRNDLKKLE 349
>gi|409992245|ref|ZP_11275447.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
gi|409936909|gb|EKN78371.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis str. Paraca]
Length = 739
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 203/393 (51%), Gaps = 48/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+DSF+ Q++ I +L + D+ MPTG G + + +
Sbjct: 12 QSLQQCLKQYFGYDSFRPG-QREIIEQVL-QKRDVLAIMPTGG----GKSLCFQLPALLK 65
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ D+ + +E T N+A
Sbjct: 66 PGLTVV-----------VSPLIA-----LMQDQVEALKNNG----IEATFLNSTVDLNQA 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E +++ +IKLLYV PER ++ F L + ++ +V+DEAHCVS+WGHDFRP
Sbjct: 106 RQREFAILQGKIKLLYVAPERLLSPQFLGFLDRIDAELGISTLVIDEAHCVSDWGHDFRP 165
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++R + +P IALTATA V+ DII + +PY V S +RSNL+Y VI
Sbjct: 166 EYRQIQQVRSRYPH-VPAIALTATATERVRFDIIRQIVLKQPY-VHVASFYRSNLYYQVI 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + + IE G GIIYC +R+ ++A L+
Sbjct: 224 PKQP-KKRFTQLLKAIESMSGS-------GIIYCSSRKRVEEVALQLQHNNIPALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R F+R ++ +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAGR
Sbjct: 276 MADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG + C ++ S K++EY+I K D +R
Sbjct: 336 DGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQR 368
>gi|161830707|ref|YP_001596401.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
gi|161762574|gb|ABX78216.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii RSA 331]
Length = 601
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 206/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG G + + + G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGG----GKSLCYQIPALVREGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE +A R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAEARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P IALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFIALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIRYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
SY + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KSYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADGYSALPYHAGLPAAQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 204/393 (51%), Gaps = 47/393 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+ L LK FG+D F+ ++ I L D+ V MPTG G + + I
Sbjct: 5 ESLEKALKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIK 58
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + +SP+++ +D T++ L ++ + E ++
Sbjct: 59 KGVTVV-----------VSPLIALM----QDQVTALADNGIGATFLNSTLNAKQVRERES 103
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++ ++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP
Sbjct: 104 LI-----LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 159 EYRQIKQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHTASFNRPNLYYEV- 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
SY + ++I+ G GI+YC +R+ +A+ L++
Sbjct: 216 -QPKTSKSYQQLYQYIKGQKG-------SGIVYCISRKTVDKVAEQLQKDGIDALPYHAG 267
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ ERS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGR
Sbjct: 268 MDDRERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGR 327
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
DG + C ++ S + +EY I T +Q
Sbjct: 328 DGEPAKCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 207/405 (51%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG +F+ Q +AI LL D F+ MPTG G + + + PG +
Sbjct: 671 FGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVSPGVTIV---- 720
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L ++ + +T +E I +L
Sbjct: 721 -------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDSEAANIYLQLS 762
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+R+
Sbjct: 763 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRM 822
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL Y V+
Sbjct: 823 NMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNLKYYVLPKKPK 880
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++ + E+I K D+ GIIYC +R +AD L+R+ ++
Sbjct: 881 KVAFDCL-EWIRKHHPYDS-----GIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSA 934
Query: 329 RSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ ++ + VI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 935 RDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 994
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + E N SM+ YCE
Sbjct: 995 SHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHVNNLYSMVHYCE 1039
>gi|420143909|ref|ZP_14651397.1| ATP-dependent DNA helicase RecQ [Lactococcus garvieae IPLA 31405]
gi|391855361|gb|EIT65910.1| ATP-dependent DNA helicase RecQ [Lactococcus garvieae IPLA 31405]
Length = 592
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 220/421 (52%), Gaps = 64/421 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L AKLK +FG++SF+ + QK+ I +L + D +PTGA G + + + G
Sbjct: 3 LEAKLKEIFGYESFR-QGQKQIIEQVL-QGKDTLGILPTGA----GKSICYQLPALLQEG 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP++S ++ + D+ +I + T E +A
Sbjct: 57 VTLV-----------VSPLIS--LMKDQVDQLNIAN-------IPATFINSTVDEQEAYF 96
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +K+L+V PER ESF+Y LQHL + + +DEAHC+S+WGHDFRP+Y
Sbjct: 97 RMQQIENGEVKILFVAPERFELESFNYFLQHL----PIDLVAIDEAHCISQWGHDFRPSY 152
Query: 216 ----RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
+RL +L S I+ALTATA P V DI +L+ ++ V KT R NL ++
Sbjct: 153 VTFAKRLADLP----TSPTILALTATATPRVSADIQDLLQISEDNTV-KTGFLRENLRFE 207
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V+ KD +K ++++ + GIIY TR+ ++ + L R
Sbjct: 208 VVKG---KDKRDFLKSYLKE------HTDESGIIYANTRKEVEEVTEWLNRNNFPAKRYH 258
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ + ER + QE F+ E+ ++ AT +FGMGI++ NVRFV+H+GMP++I AYYQE+GRA
Sbjct: 259 AGLAEGERQKNQEDFLYDEVPIMVATNAFGMGINKSNVRFVIHYGMPATIEAYYQEAGRA 318
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY-----CEQGYF 436
GRDGL S + S + + ++I+ +++ + E +++ M Y C QGY
Sbjct: 319 GRDGLDSDAILLFSPNDVRLRNFLIEQGEGSEQHK-EQEYEKLRQMQAYTSSETCLQGYI 377
Query: 437 L 437
L
Sbjct: 378 L 378
>gi|171688896|ref|XP_001909388.1| hypothetical protein [Podospora anserina S mat+]
gi|170944410|emb|CAP70520.1| unnamed protein product [Podospora anserina S mat+]
Length = 483
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 144/436 (33%), Positives = 214/436 (49%), Gaps = 60/436 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S Q++ L+ FG SF+ Q++ I + L D+FV A + G + +
Sbjct: 8 SMQDIDFTLRRQFGKKSFR--PQQREIINATLEGKDVFVQ----AATSFGKSLCFQLPAV 61
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G + ISP+LS + + + S + R+ + S E
Sbjct: 62 IDHGITIV-----------ISPLLSLMMDQVKALRNSNIDART-------LNSNTPFAER 103
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
I+++L P +LLYVTPE F L+ + R +LA I VDEAHC+SEWGHDF
Sbjct: 104 DHIMKDLGTGHPLTRLLYVTPELCSGPYFRERLELVHRQKELARIAVDEAHCISEWGHDF 163
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKP-YKVFKTSTFRSNLFY 270
R ++RL R+ + +PI+ LTATA V+ DI++ L N P K F S FR NL
Sbjct: 164 RKDFKRLSWFRERFPD-VPIMCLTATANEQVRNDILTTLGINGPNLKAFTMSAFRPNLHL 222
Query: 271 DVIF-----DDLLKDSYAHVKEFIEKCLGKDNKA----------NNCGIIYCRTREHTTD 315
+V F DD D + +K E+ D K N GIIY +R+
Sbjct: 223 EVRFTSDQTDDRYDDFVSWLKGVYERRGKPDRKPELDEMGERVENVSGIIYTTSRDECES 282
Query: 316 LADALRR----------KVNKHERSRVQESFMRGEI--NVITATISFGMGIDRQNVRFVV 363
LA +LR K+ ++ R + ++R E+ ++I AT +FGMGID+ +VRFVV
Sbjct: 283 LAASLRSHDIAARPFHAKLANQDKERTLQKWIRNEVGYDIIVATTAFGMGIDKDDVRFVV 342
Query: 364 HWGMPSSIPAYYQESGRAGRDGLQSYCRIYHS-EHSKKSLEYVIKTDTSTKRE------Q 416
HW +P S YYQE+GRAGRDG SYC +Y+S E + ++K +TS R
Sbjct: 343 HWRLPKSFEGYYQEAGRAGRDGKASYCFLYYSREDRDRVCGMIVKDNTSGDRRDKGGEAN 402
Query: 417 LELKFKNYLSMLEYCE 432
+ +++ +++ YCE
Sbjct: 403 KRARMESHEALVRYCE 418
>gi|365961574|ref|YP_004943141.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
gi|365738255|gb|AEW87348.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
Length = 731
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/380 (35%), Positives = 207/380 (54%), Gaps = 49/380 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L +LK FGF FK LQ++ ++ I+ R + FV MPTG G + + I
Sbjct: 7 DLHKELKKYFGFSQFKG-LQEQVVKSIVSR-ENTFVIMPTGG----GKSLCYQLPALIQE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ + D S+ +G + + L S KTE +
Sbjct: 61 GVAIV-----------VSPLIALMKNQV-DALRSLGSGDAIAHVLN---SSLNKTEINQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESF-HYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+++ KLLYV PE E + +L +H K++++ +DEAHC+SEWGHDFRP
Sbjct: 106 KKDI--ASGFTKLLYVAPESLTKEEYIDFLKEH-----KISFVAIDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR L + + G IPII LTATA P V++DI+ L+ + VFK S R NLFY+V
Sbjct: 159 EYRNLRNIIRALG-EIPIIGLTATATPKVQEDILKNLEMSDA-NVFKASFNRPNLFYEVR 216
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ A + FI++ GK G+IYC +R+ ++A+ L+
Sbjct: 217 TK--TKNVEADIIRFIKQHKGK------SGVIYCLSRKKVEEIAEVLKVNGISAVPYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ E++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRAGR
Sbjct: 269 LDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + +C Y+S + LE
Sbjct: 329 DGGEGHCLAYYSYKDVEKLE 348
>gi|291569161|dbj|BAI91433.1| ATP-dependent DNA helicase [Arthrospira platensis NIES-39]
Length = 739
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 203/393 (51%), Gaps = 48/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+DSF+ Q++ I +L + D+ MPTG G + + +
Sbjct: 12 QSLQQCLKQYFGYDSFRPG-QREIIEQVL-QKRDVLAIMPTGG----GKSLCFQLPALLK 65
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ D+ + +E T N+A
Sbjct: 66 PGLTVV-----------VSPLIA-----LMQDQVEALKNNG----IEATFLNSTVDLNQA 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E +++ +IKLLYV PER ++ F L + ++ +V+DEAHCVS+WGHDFRP
Sbjct: 106 RQREFAILQGKIKLLYVAPERLLSPQFLGFLDRIDAELGISTLVIDEAHCVSDWGHDFRP 165
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++R + +P IALTATA V+ DII + +PY V S +RSNL+Y VI
Sbjct: 166 EYRQIQQVRSRYPH-VPAIALTATATERVRFDIIRQIVLKQPY-VHVASFYRSNLYYQVI 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + + IE G GIIYC +R+ ++A L+
Sbjct: 224 PKQP-KKRFTQLLKAIESMSGS-------GIIYCSSRKRVEEVALQLQHNNIPALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R F+R ++ +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAGR
Sbjct: 276 MADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG + C ++ S K++EY+I K D +R
Sbjct: 336 DGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQR 368
>gi|374375555|ref|ZP_09633213.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
gi|373232395|gb|EHP52190.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
Length = 751
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 205/396 (51%), Gaps = 48/396 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S+ +L +L FGF FK ++AI LL D FV MPTG G + +
Sbjct: 22 SKLDLHGQLLKHFGFQKFKG--NQEAIIESLLSGKDTFVIMPTGG----GKSLCYQLPAV 75
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G I +SP+++ ++ +V G + ++ ++ T N
Sbjct: 76 IMEGVAII-----------VSPLIA-----LMKNQVDLVRGYNSNDEIAHFLNS---TLN 116
Query: 152 KAILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
K ++E+ L+ + KLLYV PE + L K+++ VDEAHC+SEWGH
Sbjct: 117 KKEIKEVHDDLLTGKTKLLYVAPETLTKQENLTFFSDL----KISFFAVDEAHCISEWGH 172
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YRRL E+ +IALTATA P V+ DI+ L K +F +S R NL+
Sbjct: 173 DFRPEYRRLREMMNQINPEAAVIALTATATPKVQSDIVKNLAL-KDANIFISSFNRDNLY 231
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
Y+++ K + + FI+ G NK+ GIIY R+ T +LAD L + V
Sbjct: 232 YEIVPKVSKKQTNESMVRFIK---GMKNKS---GIIYTLNRKTTEELADILMANGIKAVA 285
Query: 326 KHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H R+ Q+ F+ ++ VI ATI+FGMGID+ ++RFV+H+ + SI YYQE+G
Sbjct: 286 YHAGLDSKLRAERQDQFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNISKSIENYYQETG 345
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RAGRDGL+ C +Y+S LE++++ ++RE
Sbjct: 346 RAGRDGLEGKCLLYYSHKDVSKLEHLMRDKPLSERE 381
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 213/417 (51%), Gaps = 52/417 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ LK F F+ E Q +AI + L D FV MPTG + + A
Sbjct: 292 EVKRTLKESFKLKGFR-ENQCEAI-NATLGGKDAFVLMPTGGGKSLCYQLPA-------- 341
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
I G R ISP+LS +D+ + R+ Q LI S TK E +
Sbjct: 342 ---LIRGGKTRGVTVVISPLLS-----LMEDQVQHL--RNLNIQAFLINSETTKEERGFL 391
Query: 155 LEELRL--VKPRIKLLYVTPE-----RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
L+ L+ V+ I LLYVTPE A+ +F L Q + A +V+DEAHCVS+W
Sbjct: 392 LDSLKNPDVEKFITLLYVTPEMLSKSAAINNAFTRLHQS----RRFARLVIDEAHCVSQW 447
Query: 208 GHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y+ +GE+R + G +P++ALTATA +VK D I L K +VF S R
Sbjct: 448 GHDFRPDYKEIGEVRNRLPG--VPVMALTATATENVKLDTIHNLGI-KGCEVFTQSFNRP 504
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--V 324
NL+Y+V K+ A + I KD+ GIIYC +R+ ++A+AL+ + +
Sbjct: 505 NLYYEVRMKGKGKNDLASIASLI-----KDDHPKQTGIIYCFSRKDCENMANALQSQHGI 559
Query: 325 NKH---------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
H E++ VQ+ + G +VI ATI+FGMGID+ NVRFV+H +P S+ YY
Sbjct: 560 KAHHYHAGMEGPEKANVQKEWQAGRYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYY 619
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QE+GRAGRDG S C +++ + I D EQ E + + M +YC+
Sbjct: 620 QETGRAGRDGKPSSCYLFYGFGDASKQKRFID-DGEGSHEQKERQRQMLKKMTQYCD 675
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 204/405 (50%), Gaps = 48/405 (11%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
+ +FG S++ + I + + HD+FV MPTG + + A
Sbjct: 483 RTVFGNRSWR--KNQVEIINACMSGHDVFVLMPTGGGKSLCYQIPAMC------------ 528
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELR 159
N ++ I+S +D + T L ++G T +E+ I +LR
Sbjct: 529 -------NEGVTIIISPLISLIQDQVMLLQT----LAYPAAALTGTTSSEDVTQIYRDLR 577
Query: 160 LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P +KLLY+TPE+ V + + L ++L LA V+DEAHCVS+WGHDFRP Y+ L
Sbjct: 578 QTPPTLKLLYLTPEKVVQSPAIMDLFRNLNNNGLLARAVIDEAHCVSQWGHDFRPNYKEL 637
Query: 219 GELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L+ +F S+PI+ALTATA VK+D+I L P FK S R NL Y V+
Sbjct: 638 KLLKTEFP--SLPILALTATATERVKKDVIFNLHMKNPI-TFKQSFNRPNLQYAVVKKS- 693
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
K + EFI K GI+YC +R +A LR+K +
Sbjct: 694 -KKIVDDIAEFINKFY-----PGKSGIVYCISRNDCVTVASELRKKGLRANFYHANMEPD 747
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER R QES+ R I +I +TI+FGMGI++ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 748 ERQRTQESWTRDRIKIIVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGRDGNL 807
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +Y+S K E +IK T + + +N ++ YCE
Sbjct: 808 SHCILYYSFGDKFRQEVLIKNSTGSTHASIRENMENLNRIVGYCE 852
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 200/388 (51%), Gaps = 49/388 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNDQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D T++ G + + + Q + IL+
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRDRESLILQ-- 107
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 108 ----GKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQI 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 164 KQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDASIHIASFNRPNLYYEV--QPKT 219
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
SY + ++I+ G GI+YC +R+ +A+ L++ +N E
Sbjct: 220 SKSYQQLYQYIKGKKG-------SGIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQE 272
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 273 RSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPA 332
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 333 KCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|300728338|ref|ZP_07061703.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299774403|gb|EFI71030.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 726
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 203/383 (53%), Gaps = 51/383 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E L LK FGFD FK + Q+ IR++L +D FV MPTG G + + I
Sbjct: 4 EVNLIDALKRYFGFDKFKGD-QEAIIRNVL-DGNDTFVLMPTGG----GKSLCYQLPSLI 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + ISP+++ ++ ++ G S + + + + NK
Sbjct: 58 MPGTAIV-----------ISPLIA-----LMKNQVDVINGMS---EGDGVAHYLNSSLNK 98
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ +E+++ + + KLLYV PE E L+ + K+++ VDEAHC+SEWGHD
Sbjct: 99 SAVEQVKSDIRAGKTKLLYVAPESLTKEDNVEFLKTV----KISFYAVDEAHCISEWGHD 154
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YRR+ + GN+ P+IALTATA V+ DI L ++ FK+S R NL+Y
Sbjct: 155 FRPEYRRIRPIISQIGNA-PVIALTATATDKVRTDIKRSLGIADAHE-FKSSFNRPNLYY 212
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V KD + FI++ GK GIIYC R+ +LA+ L+
Sbjct: 213 EV--RPKTKDVDKQIIMFIKQHPGK------SGIIYCLARKKVEELAEILKANDIKAAAY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GR
Sbjct: 265 HAGLDSSTRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C ++++ K LE
Sbjct: 325 VGRDGGEGKCIAFYAKKDLKKLE 347
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 200/388 (51%), Gaps = 49/388 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNDQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D T++ G + + + Q + IL+
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRDRESLILQ-- 107
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 108 ----GKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQI 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 164 KQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDASIHIASFNRPNLYYEV--QPKT 219
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
SY + ++I+ G GI+YC +R+ +A+ L++ +N E
Sbjct: 220 SKSYQQLYQYIKGKKG-------SGIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQE 272
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 273 RSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPA 332
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 333 KCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|409124316|ref|ZP_11223711.1| ATP-dependent DNA helicase RecQ [Gillisia sp. CBA3202]
Length = 731
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 206/383 (53%), Gaps = 48/383 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E +L +LK FGF FK LQ++ I+ I+ H+ FV MPTG G + +
Sbjct: 4 TEIDLHQQLKKYFGFSQFKG-LQEQVIKSIV-NKHNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTE 150
I G + +SP+++ ++ + G S + + ++ S K+E
Sbjct: 58 IEEGTAIV-----------VSPLIA-----LMKNQVDAIRGISSEHGIAHVLNSSLNKSE 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
K + E++ KLLYV PE E L R +++++ VDEAHC+SEWGHD
Sbjct: 102 IKQVKEDI--TNGITKLLYVAPESLTKEENVEFL----RGVEISFMAVDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR L + + G++IPII LTATA P V++DI+ L K FK S R NL+Y
Sbjct: 156 FRPEYRNLKHIIKRIGDNIPIIGLTATATPKVQEDILKNLGITDA-KTFKASFNRPNLYY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNK 326
++ K+ + + F+++ GK GIIYC +R+ +LA L+ + V
Sbjct: 215 EI--RPKTKNVDSDIIRFVKQNEGK------SGIIYCLSRKRVEELAQVLQVNGIKAVPY 266
Query: 327 HE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
H R + Q+ F+ +I+V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GR
Sbjct: 267 HAGLDAKTRIKHQDMFIMEDIDVVVATIAFGMGIDKPDVRFVIHNDIPKSLESYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLE 403
AGRDG + +C Y++ + LE
Sbjct: 327 AGRDGGEGHCLAYYAYKDIEKLE 349
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 200/388 (51%), Gaps = 49/388 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKHHFGYDQFRPN--QRQIIEAALNDQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D T++ G + + + Q + IL+
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRDRESLILQ-- 107
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 108 ----GKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQI 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 164 KQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDASIHIASFNRPNLYYEVRAK--T 219
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
SY + ++I+ G GI+YC +R+ +A+ L++ +N E
Sbjct: 220 SKSYQQLYQYIKGQKG-------SGIVYCISRKTVDQVAEQLQKDGINALPYHAGMNDQE 272
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 273 RSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPA 332
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 333 KCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|430814293|emb|CCJ28450.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1066
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 199/360 (55%), Gaps = 45/360 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG F+ Q +AI + L D+F+ MPTG +S P I
Sbjct: 502 LKNVFGLKEFRNN-QLEAI-NTTLSGKDLFLLMPTGG---------GKSLCYQLPS--LI 548
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT-ENKAILEEL 158
+G + +SP++S +D ++ D+ ++G+T + + K I++ L
Sbjct: 549 DSGKTKGLTLVVSPLIS----LMQDQVEHLL----DININSASINGETSSSKRKEIVKML 600
Query: 159 RLVKPRIKLLYVTPE-RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
IKLLYVTPE A SF+ L H+ NK A +VVDEAHC+S+WGHDFRP Y++
Sbjct: 601 YSNDIYIKLLYVTPEFLAKNNSFNQALDHIYSKNKFARVVVDEAHCISQWGHDFRPDYKQ 660
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG+++Q ++P IALTATA VK+D+I L N V S R N++Y+V+ ++
Sbjct: 661 LGQIKQ-KYQTVPFIALTATANEIVKKDVIHNLNINNCV-VLSQSFNRPNIYYNVVVRNI 718
Query: 278 LKDSYAHVKEFI-EKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VN 325
Y+ +++ I K GK GIIYC +R++ D A R K +
Sbjct: 719 --SVYSDIRDIITSKYPGKS------GIIYCFSRKNCEDTARKFRDKYHMKIHHYHAGMT 770
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS+VQ+ + +G+ ++I ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG
Sbjct: 771 NKERSQVQKDWKKGKYHIIVATIAFGMGIDKSDVRFVIHLFLPKSLEGYYQETGRAGRDG 830
>gi|333378586|ref|ZP_08470317.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
gi|332883562|gb|EGK03845.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
Length = 731
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 204/397 (51%), Gaps = 55/397 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E LT LK FGFD+FK +KAI LL D FV MPTG G + + +
Sbjct: 5 EDILTCSLKKHFGFDNFKG--NQKAIIQNLLDGKDTFVLMPTGG----GKSLCYQLPALL 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G I ISP+++ + V + + + + + NK
Sbjct: 59 MEGTAVI-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFMNSSLNK 99
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
A +E+++ ++ + KLLYV PE E L+ + K+++ +DEAHC+SEWGHD
Sbjct: 100 AAIEQVKGDILSGKTKLLYVAPESLTKEENIDFLRQI----KISFYAIDEAHCISEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YRR+ + G PIIALTATA P V+ DI L + VFK+S R NL+Y
Sbjct: 156 FRPEYRRIRPIVNEIGKH-PIIALTATATPKVQMDIQKNLGMVEA-DVFKSSFNRENLYY 213
Query: 271 DV--IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+V D + KD ++K ++ GIIYC +R+ + A+ L+
Sbjct: 214 EVRSKTDKVDKDIIKYIK----------SQGTKSGIIYCLSRKKVEEFAEILQTNNINAL 263
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS Q++F+ ++NVI ATI+FGMGID+ +VR+V+H+ MP S+ YYQE+
Sbjct: 264 PYHAGLDPSTRSANQDAFLMEKVNVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQET 323
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRAGRDG + C ++S + LE ++ ++E
Sbjct: 324 GRAGRDGGEGRCIAFYSFKDLQKLEKFMQGKPVAEQE 360
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 203/391 (51%), Gaps = 47/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L D+ V MPTG G + + I G
Sbjct: 7 LEKALKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ +D T++ L ++ + E ++++
Sbjct: 61 VTVV-----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRERESLI 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP Y
Sbjct: 106 -----LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ ++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 161 RQIKQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--Q 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
SY + ++I+ G GI+YC +R+ +A+ L++ +
Sbjct: 217 PKTSKSYQQLYQYIKGQKG-------SGIVYCISRKTVDQVAEQLQKDGINALPYHAGME 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS+ Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG
Sbjct: 270 DRERSQNQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S + +EY I T +Q
Sbjct: 330 EPAKCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 136/410 (33%), Positives = 214/410 (52%), Gaps = 56/410 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F F+ ++ + L D+FV MPTG G + + + G +
Sbjct: 229 LREVFKMKEFR--TNQREVIQACLSGKDVFVLMPTGG----GKSICYQLPALVYDGITIV 282
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV----SGQTKTENKAIL 155
+SP+LS + R+ L Q ++ S ++ E +
Sbjct: 283 -----------VSPLLSLVQDQIRN-----------LLQKGILALPINSNLSRAERDLVF 320
Query: 156 EELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ L + K+ YVTPE A + FH +L LV +L V+DEAHCVS+WGHDFRP
Sbjct: 321 QVLGGDELICKIFYVTPELIAKSGHFHDVLSGLVCRGRLKRFVIDEAHCVSQWGHDFRPD 380
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
Y+ LG +R S+PIIALTATA V+ DI+ L + + FK S RSNL Y+V
Sbjct: 381 YKELGSMRARY-PSVPIIALTATATQKVEMDILENLGI-RGCETFKMSFNRSNLRYEVRA 438
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------K 323
+ D + V+ C CGIIYC +++ +++ L +
Sbjct: 439 KTSTVELDIASFVQTHFPDC---------CGIIYCTSKKECEMISEKLGKYMGTAFYHAG 489
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++K+ER+ VQE + RGE VI ATI+FGMGID+++VRFV+H+ +P S+ YYQE+GRAGR
Sbjct: 490 LSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 549
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
DGL+S C ++++ KK + ++I+ EQ + + ++ +++++CE
Sbjct: 550 DGLESVCVLFYTYGDKKKISFMIEKGDGG-YEQKQRQREDLEAVIQFCEN 598
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178 [Arabidopsis thaliana]
Length = 1031
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 182/318 (57%), Gaps = 43/318 (13%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNK---LAYIVVD 199
+G E IL+EL K + KLLYVTPE+ A +ES LL+HL N LA V+D
Sbjct: 478 AGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSES---LLRHLEILNSRSLLARFVID 534
Query: 200 EAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVF 259
EAHCVS+WGHDFRP Y+ LG L+Q N IP++ALTATA SVK+D++ L VF
Sbjct: 535 EAHCVSQWGHDFRPDYQGLGVLKQKFPN-IPMLALTATATTSVKEDVVQALGLVNCV-VF 592
Query: 260 KTSTFRSNLFYDVI--FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA 317
+ S R NL+Y V+ + L+D + +FI ++N + CGIIYC +R +
Sbjct: 593 RQSFNRPNLWYSVVPKTNKCLED----IDKFI-----RENHFDECGIIYCLSRMDCEKVT 643
Query: 318 DALR----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGM 367
+ALR ++ +R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +
Sbjct: 644 EALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSL 703
Query: 368 PSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD-------------TSTKR 414
P SI Y+QE GRAGRDG +S C +Y+S ++++I ++
Sbjct: 704 PKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSG 763
Query: 415 EQLELKFKNYLSMLEYCE 432
LE +N L M+ YCE
Sbjct: 764 RMLETNTENLLRMVSYCE 781
>gi|399927001|ref|ZP_10784359.1| ATP-dependent DNA helicase RecQ1 [Myroides injenensis M09-0166]
Length = 731
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 210/384 (54%), Gaps = 47/384 (12%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K +E +L +LK FGF FK LQ+ ++ I+ H+ FV MPTG +S
Sbjct: 2 KSTEIDLYKELKRFFGFSQFKG-LQEDVVKSII-SGHNTFVIMPTGG---------GKSL 50
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
P +L G +SP+++ ++ +I + ++ ++ S TK+
Sbjct: 51 CYQLPA--LVLEGTAIV----VSPLIA----LMKNQVDAIRSLSTEHGIAHVLNSSLTKS 100
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + E+++ KLLYV PE E + L+ + KL+++ +DEAHC+SEWGH
Sbjct: 101 EINQVKEDIK--SGVTKLLYVAPESLTKEEYVSFLKEV----KLSFVAIDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + + G+ IP+I LTATA P V++DI+ L+ VFK S R NLF
Sbjct: 155 DFRPEYRNLRNIIRQLGD-IPMIGLTATATPKVQEDILKNLEIPDA-NVFKASFNRPNLF 212
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y++ K+ + + FI++ GK G+IYC +R+ ++A+ L+
Sbjct: 213 YEI--RPKTKNIESDIIRFIKQNAGK------SGVIYCLSRKKVEEIANVLQVNGISAVP 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VR+V+H +P S+ +YYQE+G
Sbjct: 265 YHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C Y+S + LE
Sbjct: 325 RAGRDGGEGHCLAYYSYKDIEKLE 348
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 217/419 (51%), Gaps = 66/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI + L D FV MPTG + + A +
Sbjct: 822 LKKKFHLRGFRHN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA-----------VV 868
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+G+ R ISP+LS + K + Q +LI T K IL+ LR
Sbjct: 869 QSGHTRGVTIVISPLLSLMQDQVEHLKALNI-------QAQLINGETTVAHRKTILDHLR 921
Query: 160 LVKPR--IKLLYVTPERA-VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
P ++LLYVTPE ++F + L LA IV+DEAHCVS+WGHDFRP Y+
Sbjct: 922 GDSPHDFVQLLYVTPEMVNQNQTFVRAFEGLHSRCLLARIVIDEAHCVSQWGHDFRPDYK 981
Query: 217 RLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--- 272
LGE R +F N++P++ALTATA +VK D++ VL +VF S R NL Y+V
Sbjct: 982 ALGEFRSRF--NAVPVMALTATATENVKFDVMQVLGMEN-CEVFTQSFNRPNLTYEVRPK 1038
Query: 273 -----IFD---DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
+ D DL+K +Y D +A GI+YC +R++ +A LR++
Sbjct: 1039 GKGRAVLDSIADLIKSTY-------------DGQA---GIVYCLSRKNCESVATQLRKEY 1082
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R +Q+ + GE NVI ATI+FGMGID+ +VRFV+H +P S+
Sbjct: 1083 HIEAQHYHAGIPSGKRIEIQQKWQEGEFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEG 1142
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG QS C +Y+ SL+++I+ + +Q E + + +++++CE
Sbjct: 1143 YYQETGRAGRDGNQSGCYLYYGYGDTASLKHMIENGDGSP-QQKEHQKQLLRNVVQFCE 1200
>gi|443244229|ref|YP_007377454.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442801628|gb|AGC77433.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 730
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 200/379 (52%), Gaps = 48/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FGF+ F+ LQK+ I LL D FV MPTG G + + + G
Sbjct: 8 LEENLKKYFGFEQFRG-LQKQVITS-LLNKEDCFVIMPTGG----GKSLCYQLPALMQEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ + G SD + ++ S +KT+ + +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAIRGVSDHDGVAHVLNSSLSKTDVQQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+++ KLLYV PE E + L+ K++++ VDEAHC+SEWGHDFRP
Sbjct: 106 KDDIE--NGITKLLYVAPESLTKEEYVDFLKQ----QKISFLAVDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L ++ G+ IPII LTATA P V++DI+ L+ F+ S R NLFY+V
Sbjct: 160 YRNLRKIIDRIGSDIPIIGLTATATPKVQEDILKNLQITDA-TTFQASFNRPNLFYEVRP 218
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE-- 328
D A + FI++ GK GI+YC +R+ +LA L+ + V H
Sbjct: 219 KTANVD--ADITRFIKQNEGK------SGIVYCLSRKRVEELAQVLQVNGIKAVPYHAGL 270
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R + Q+ F+ + +V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAGRD
Sbjct: 271 DAKTRVKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRD 330
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + +C Y+S + LE
Sbjct: 331 GGEGHCLAYYSYKDIEKLE 349
>gi|333029863|ref|ZP_08457924.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332740460|gb|EGJ70942.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 605
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 215/403 (53%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG++ F+ LQ++ I +IL + D V MPTG G + + + G +
Sbjct: 10 LKTKFGYEGFR-PLQREIIENILDK-KDTLVLMPTGG----GKSICYQLPALLLKGITIV 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S +D +++ + L S + TEN+ I + R
Sbjct: 64 -----------ISPLIS----LMKDQVEALLANGINAGALN---SNNSDTENELIKQNCR 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +IKLLY++PE+ ++E YLL+ + ++ VDEAHC+S+WGHDFRP Y +LG
Sbjct: 106 --QGKIKLLYISPEKLLSE-IDYLLKDI----DISLFAVDEAHCISQWGHDFRPEYTQLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q+ S+P++ALTATA+ +QDII LK P K+F +S R NL V K
Sbjct: 159 ILHQYFP-SVPMVALTATADKITRQDIIRQLKLKNP-KIFISSFDRPNLSLKVEVGYQQK 216
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
D + ++ FI+ ++ GIIYC +R+ T + L +K + + R
Sbjct: 217 DKHKYIYNFIQ------DRPGEAGIIYCMSRKKTETICRYLEKKGISATIYHAGLAPNIR 270
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ MP SI +YYQE GRAGRDG+ S
Sbjct: 271 EKAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNMPKSIESYYQEIGRAGRDGVASD 330
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
++++ + ++ T + + +Q E+ + + +Y E
Sbjct: 331 TVLFYNVG-----DIILLTKFANESKQQEINLEKLDRIQQYAE 368
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 217/416 (52%), Gaps = 53/416 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL L+ F F+ + Q +AI L D+FV MPTG + + A
Sbjct: 465 RELMHTLRTKFQLKGFR-KNQIEAINGTLA-GKDVFVLMPTGGGKSLCYQLPA------- 515
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG-QTKTENK 152
+ GN R ISP+LS + + + L +SG Q E K
Sbjct: 516 ----VMETGNSRGVTLVISPLLSLMQDQLEHLRKLNIPA--------LPLSGEQPSDERK 563
Query: 153 AILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
++ L K ++KLLYVTPE A + +L+ L LA IV+DEAHCVS WGHDF
Sbjct: 564 QVISFLMAKKVQVKLLYVTPEGLASNGAISRVLESLYTRKLLARIVIDEAHCVSHWGHDF 623
Query: 212 RPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
RP Y++LG LR ++ G +P++ALTATA VK+D+I+ L+ ++ K+S R NL+Y
Sbjct: 624 RPDYKQLGILRDKYRG--VPVMALTATANEIVKKDVITTLRMENCIEM-KSSFNRPNLYY 680
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
++ KD +A + FI + + + GIIYC +R +A LR +
Sbjct: 681 EI---KPKKDVFAEMHRFI-----SNGRLDQSGIIYCLSRTSCEQVAAKLRNEYGLKAWH 732
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++K ER R+Q S+ G VI ATI+FGMG+D+ +VR+V+H P S+ YYQE+G
Sbjct: 733 YHAGLDKAERQRIQSSWQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFPKSLEGYYQETG 792
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKT---DTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG ++C +++S + + +I + D TK Q ++ ++++CE
Sbjct: 793 RAGRDGKPAHCIMFYSYKDSITFQKLITSGEGDAETKERQRQM----LRQVIQFCE 844
>gi|255579791|ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
gi|223529697|gb|EEF31639.1| DNA helicase, putative [Ricinus communis]
Length = 718
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 217/431 (50%), Gaps = 54/431 (12%)
Query: 19 LTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVS 78
++ N + RK ++ L L+ FG F+ + Q +AI+ +L D F MPTG
Sbjct: 11 ISSNDKQRKQMITGKEGLVKLLRWHFGHSDFRGK-QLEAIQSVL-SGRDCFCLMPTGGGK 68
Query: 79 LVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + A SR PG + +SP+++ + ++ +
Sbjct: 69 SMCYQIPALSR----PGIVLV-----------VSPLIALM-------ENQVMALKEKEIA 106
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
E + S QT I E+L KP I+LLYVTPE T F L + L I +
Sbjct: 107 AEFLSSTQTSQLKTKIHEDLDSGKPSIRLLYVTPELIATPGFMSKLTRIHARGLLNLIAI 166
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+S WGHDFR +YR+L LR + +PI+ALTATA P V++D+I L P +
Sbjct: 167 DEAHCISTWGHDFRASYRKLSSLRNLFPD-VPILALTATAVPKVQKDVIESLCLQDPL-I 224
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
K+S RSN++Y+V + DLL D+YA + ++ + + C IIYC R LA
Sbjct: 225 LKSSFNRSNIYYEVRYKDLLDDAYADLSSVLK------SSGDICAIIYCLQRTTCDGLAA 278
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L + +N RS V + ++ +I V+ AT++FG ++V+ V H+ +P
Sbjct: 279 HLSKNGISCAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFG-----KDVKLVCHFNIP 333
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT------DTSTKREQLELK-F 421
S+ A+YQESGRAGRD L +Y+ +K +E+++ + +S+ ++ L K
Sbjct: 334 KSMEAFYQESGRAGRDQLPCRSLLYYGVDDQKRMEFILSSAGSKKLQSSSSQDGLSKKSL 393
Query: 422 KNYLSMLEYCE 432
++ M+EYCE
Sbjct: 394 SDFKQMVEYCE 404
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 207/408 (50%), Gaps = 56/408 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI LL D FV MPTG G + + + G +
Sbjct: 674 FGLHQFRFN-QLEAINASLL-GEDTFVLMPTGG----GKSLCYQLPACVSAGVTVV---- 723
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI---VSGQTK-TENKAILEELR 159
ISP+ ++ IV L L++ +SG K +E I +L
Sbjct: 724 -------ISPL-----------RSLIVDQVQKLTTLDICATSLSGDKKDSEAARIYMQLS 765
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLY TPE+ LQ+L LA +V+DEAHCVS+WGHDFRP Y+RL
Sbjct: 766 RKDPAIKLLYATPEKVCASGRMISALQNLYERGLLARLVIDEAHCVSQWGHDFRPDYKRL 825
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
ELR+ N +PI+ALTATA P V++DI++ L +P +VF S R+NL Y V+
Sbjct: 826 HELRRMFPN-VPIMALTATATPRVQKDILNQLAMTRP-QVFTMSFNRNNLKYSVL----- 878
Query: 279 KDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K+ E+C+ K + GI+YC +R LAD+L+R ++
Sbjct: 879 ---PKKPKKVDEECIQWIKKYYPRDSGIVYCLSRNDCDTLADSLQRAGIAALAYHAGLSD 935
Query: 327 HERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ ++ + V+ ATI+FGMGID+ +VR+V+H +P S+ YYQESGRAGRDG
Sbjct: 936 SDREYVQNKWINQDGCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDG 995
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
S+C +++S ++ +I D ++ N SM+ +CE
Sbjct: 996 EISHCVLFYSYSDVIRIKRLIAMDKDGNQQSKATHINNLHSMVHFCEN 1043
>gi|282898834|ref|ZP_06306821.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
gi|281196361|gb|EFA71271.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
Length = 719
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/411 (34%), Positives = 217/411 (52%), Gaps = 55/411 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L + K FG+D F+ ++ I L D+ V MPTG G + + + P
Sbjct: 5 DLEKEFKKYFGYDQFRP--GQRQIIEDALENRDLMVVMPTGG----GKSLCFQLPALLKP 58
Query: 95 GADFILNGNVRSRNGWISPILSSFYLR---FRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
G + +SP+++ + R++ S S L + Q ++
Sbjct: 59 GLTVV-----------VSPLIALMQDQVEALRNNNISATLINSSL------TTYQVRSRE 101
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+AI+ ++KLLYV PER V+E F +L + LA V+DEAHCVSEWGHDF
Sbjct: 102 EAIM------NGKVKLLYVAPERLVSERFLPILDVVKEKFGLANFVIDEAHCVSEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR+L LR+ + +P IALTATA V+ DII L +P V S R NL+Y+
Sbjct: 156 RPEYRQLILLRKRFSH-VPTIALTATATDRVRADIIQQLGLKQP-AVHIASFNRQNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V + ++SY + E I K+N+ + GIIYC TR++ +L L+
Sbjct: 214 VRPKN--RNSYGEILEII-----KENEGS--GIIYCLTRKNVDELTLKLQNSQIAALPYH 264
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ +ER++ Q F+R ++ ++ ATI+FGMGI++ +VRFV+H +P ++ +YYQESGRA
Sbjct: 265 AGLVDYERAKNQTRFIRDDVRIMVATIAFGMGINKPDVRFVIHCDLPRNLESYYQESGRA 324
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRDG S C ++ S K++E+ I T + EQL K + +++Y E
Sbjct: 325 GRDGEPSRCTLFFSFGDVKTIEWSIGKKTDPQ-EQLIAK-QQLRQVIDYAE 373
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 209/418 (50%), Gaps = 61/418 (14%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG SF+ ++ I + + D+FV MPTG G ++ + I G +
Sbjct: 117 KKVFGNHSFR--PNQREIINATMSGSDVFVLMPTGG----GKSLTYQLPALICGGITLV- 169
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
ISP++S + + + + S + +G E I +EL
Sbjct: 170 ----------ISPLVSLIQDQIMNLLQANIPAAS-------LSAGMEWAEQLKIFQELNS 212
Query: 161 VKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHDFRPTYRR 217
+ KLLYVTPE+ LL+HL N LA V+DEAHCVS+WGHDFRP Y+
Sbjct: 213 EHSKYKLLYVTPEKVAKSD--SLLRHLENLNSRGLLARFVIDEAHCVSQWGHDFRPDYQS 270
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y V+
Sbjct: 271 LGILKQKFPN-IPVLALTATATASVKEDVVQALGLVNCV-VFRQSFNRPNLWYSVV--PK 326
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKH 327
K + +FI K+N + CGIIYC +R +++ L+ +
Sbjct: 327 TKKCLEDIDKFI-----KENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPE 381
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
+R+ +Q + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRAGRDG +
Sbjct: 382 QRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 441
Query: 388 SYCRIYHSEHSKKSLEYVIKTD-------------TSTKREQLELKFKNYLSMLEYCE 432
S C +Y+ ++++I ++ LE +N L M+ YCE
Sbjct: 442 SSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCE 499
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 200/388 (51%), Gaps = 49/388 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNDQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D T++ G + + + Q + IL+
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRDRESLILQ-- 107
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 108 ----GKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQI 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 164 KQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDASIHIASFNRPNLYYEVRAK--T 219
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
SY + ++I+ G GI+YC +R+ +A+ L++ +N E
Sbjct: 220 SKSYQQLYQYIKGKKG-------SGIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQE 272
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 273 RSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPA 332
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 333 KCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|325579297|ref|ZP_08149253.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
gi|325159532|gb|EGC71666.1| ATP-dependent helicase RecQ [Haemophilus parainfluenzae ATCC 33392]
Length = 621
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 210/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+++FG+ SF+ + Q++ I H L D V M TG G + + PG +
Sbjct: 22 LRSVFGYQSFR-KGQEEVI-HAALSGQDALVVMATGN----GKSLCYQIPALCFPGLTLV 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + E +
Sbjct: 76 -----------ISPLISLM-------KDQVDQLQANGIEADFLNSSQTPEQQQQV--ENK 115
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLY++PE+ +T SF L+ Y ++++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 116 LISGQLKLLYISPEKVMTNSFF----QLISYAQISFIAIDEAHCISQWGHDFRPEYTQLG 171
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ N+ PI+ALTATA+ + +QDI++ LK + P+K + S R N+ Y L+
Sbjct: 172 GLKAAFPNA-PIMALTATADYATRQDILTHLKLDHPHK-YIGSFDRPNIRYT------LE 223
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ L + K+ GI+YC +R +A+ LR K + R
Sbjct: 224 EKFKPMEQLTRFVLAQKGKS---GIVYCNSRSKVERIAEILRNKGVSAAAYHAGMETALR 280
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ+ F R I V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 281 ECVQQDFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 340
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 341 AVLFYEPADYAWLQKILLEKPETPQRQIE 369
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 200/388 (51%), Gaps = 49/388 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
+SP+++ +D T++ G + + + Q + IL+
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRDRESLILQ-- 107
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 108 ----GKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQI 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 164 KQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDASIHIASFNRPNLYYEVRAK--T 219
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
SY + ++I+ G GI+YC +R+ +A+ L++ +N E
Sbjct: 220 SKSYQQLYQYIKGKKGS-------GIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQE 272
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 273 RSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPA 332
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 333 KCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|85817623|gb|EAQ38797.1| ATP-dependent DNA helicase RecQ [Dokdonia donghaensis MED134]
Length = 731
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 204/385 (52%), Gaps = 48/385 (12%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K + +L +LK FGF FK LQ++ I+ I+ H FV MPTG G + +
Sbjct: 2 KTEQIDLHKELKKYFGFGQFKG-LQEEVIKSIVGGNH-TFVIMPTGG----GKSLCYQLP 55
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS-DLYQLELIVSGQTK 148
I G + +SP+++ ++ + G S D ++ S TK
Sbjct: 56 ALIAEGTAIV-----------VSPLIA-----LMKNQVDALRGISQDEGIAHVLNSSLTK 99
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E K + E++ + KLLYV PE E L R K++++ +DEAHC+SEWG
Sbjct: 100 GEIKTVKEDI--ARGVTKLLYVAPESLTKEENVEFL----REQKISFLAIDEAHCISEWG 153
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR L ++ G++IPIIA+TATA P V++DI+ L FK S R NL
Sbjct: 154 HDFRPEYRNLRKIIGRIGDNIPIIAVTATATPKVQEDILKNLGITNA-NTFKASFNRPNL 212
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKV 324
+Y+V D A + F+++ GK GIIYC R+ +LA L+ + V
Sbjct: 213 YYEVRPKTAQVD--ADIIRFVKQNEGK------SGIIYCLARKRVEELAQTLQVNGLKAV 264
Query: 325 NKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
H R+R Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+
Sbjct: 265 PYHAGLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + +C +++ + LE
Sbjct: 325 GRAGRDGGEGHCLAFYAYKDIEKLE 349
>gi|397779827|ref|YP_006544300.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396938329|emb|CCJ35584.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 780
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 212/408 (51%), Gaps = 53/408 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A L+ +G+ SF Q++ +R IL R D+ + TG + + A
Sbjct: 41 LYAALEHYYGYTSF-LPFQEEIVRDIL-RKRDVLAVLATGGGKSLCYQLPA--------- 89
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
++ G + +SP++S +D ++VT L + + A L
Sbjct: 90 ---LVTGGL---TVVVSPLISLM----KDQVDTLVTQGVPAATLNSTLPYDAMVKTLADL 139
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E RL +LLYV+PER V F L R + + + VDEAHC+SEWGH FRP Y
Sbjct: 140 EAGRL-----RLLYVSPERVVQPRFLAAL----RESGVTLVAVDEAHCISEWGHQFRPEY 190
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
R+L L+ QF +P+IALTATA P V+QDII L P V+ S+ R NL Y V
Sbjct: 191 RQLSVLKEQFP--EVPMIALTATAIPEVRQDIIRQLSLADP-AVYVGSSNRENLRYTVAG 247
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE-- 328
KD+Y + +++ + N GI+Y +++ T ++A+ LR R + H
Sbjct: 248 K---KDAYPQLIDYLR------SNPNRSGIVYFSSKKRTEEIAERLRNDGVRALPYHADL 298
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R RVQE F+R EI+V+ AT +FGMGID+ +VRFV+H+ MP S+ AY QE+GRAGRD
Sbjct: 299 PDNYRHRVQEQFIRDEIDVVCATNAFGMGIDKPDVRFVIHYDMPKSLEAYAQETGRAGRD 358
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
G S C +++S ++ + +++ D+ + + + + M +CE
Sbjct: 359 GEASDCILFYSPGDRRKNQVMLERDSLDRPDLYPVAVQKLNDMAAFCE 406
>gi|299141494|ref|ZP_07034630.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
gi|298576830|gb|EFI48700.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
Length = 725
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 200/379 (52%), Gaps = 49/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD FK + Q+ IR+ L+ HD FV MPTG G + + I G
Sbjct: 7 LTQQLKHYFGFDKFKGD-QEAIIRN-LMEGHDTFVLMPTGG----GKSLCYQLPSLIMEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ ISP+++ ++ ++ G S+ + + S K + +
Sbjct: 61 TAIV-----------ISPLIA-----LMKNQVDVINGLSEEVGVAHYLNSSLNKAAIQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE E LQ + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 MDDVR--SGRTKLLYVAPESLNKEENVEFLQSV----KVSFYAIDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR + G + PIIALTATA V+ +I L K FK+S R+NL+Y+V
Sbjct: 159 YRNIRPTINKIGTA-PIIALTATATDKVRSNIKKSLGITDA-KEFKSSFNRANLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
D + +FI + GK GIIYC +R+ +LA+ L+ +
Sbjct: 215 RPKTNDVDKQIIKFIRQHEGK------SGIIYCLSRKKVEELAEVLKANEIKAAPYHAGL 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRD
Sbjct: 269 DSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++++ K LE
Sbjct: 329 GGEGLCIAFYAQKDLKKLE 347
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 197/372 (52%), Gaps = 50/372 (13%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG DSF+ LQK+AI IL D F+S+PTG +S P L
Sbjct: 279 KMVFGNDSFR-RLQKEAINAIL-SNKDTFISLPTGG---------GKSLCFQLPA----L 323
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
G N ISP+L+ D+ S + +S +E + S + +E K + +EL
Sbjct: 324 IGKDAGVNIVISPLLA-----LMQDQLSKL--KSLGVPVETLNSQLSISERKRVFQELNN 376
Query: 161 VKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
+ IKLLYVTPER F +L ++ +L ++VDEAH +SEWGHDFRP+YRRL
Sbjct: 377 INCSIKLLYVTPERFSGSDFQEILVNIHDRGQLKRLIVDEAHSISEWGHDFRPSYRRLSL 436
Query: 221 LR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF----- 274
R QF G +PI+ALTATA V++DI S L+ + ++S RSNL Y V
Sbjct: 437 FRKQFPG--LPIVALTATATDRVEKDIKSSLQMRSIVNI-RSSFMRSNLIYQVRLKSQDS 493
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+L D YA++ + K GIIYC T + +++ L + +
Sbjct: 494 QSVLTDIYAYISKKYPK---------ESGIIYCATTKDCEIISEYLSSRGLDTCFYHASL 544
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+R ++Q + G V+ TI+FGMGID+ N RFV+H +P SI AYYQ++GRAGRD
Sbjct: 545 KPSQRIQLQNDWTEGRFKVVCTTIAFGMGIDKSNTRFVIHHTIPQSIEAYYQQTGRAGRD 604
Query: 385 GLQSYCRIYHSE 396
G S C +Y+S+
Sbjct: 605 GQTSDCILYYSK 616
>gi|428773638|ref|YP_007165426.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
gi|428687917|gb|AFZ47777.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
Length = 713
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 214/414 (51%), Gaps = 57/414 (13%)
Query: 36 LTAKLKALFGFDSFKCELQK---KAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
L+ LK FG+DSF+ +K AI H D+ V MPTG G + + +
Sbjct: 4 LSESLKKYFGYDSFRPGQEKIVQDAIAH-----KDLLVIMPTGG----GKSLCFQLPALL 54
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTEN 151
G + ISP++S +D T++ G Y + QTK
Sbjct: 55 KQGVTIV-----------ISPLISLM----QDQVTALQDNGIGATYLNSTLNYEQTKIRQ 99
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ IL +IKLLY+ PER V+++F L L + +A +DEAHC+SEWGHDF
Sbjct: 100 RDILA------GKIKLLYLAPERLVSDTFQPFLVTLAQKIGIAAFAIDEAHCISEWGHDF 153
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
R YR++ LRQ +PI ALTATA V++DII L P ++ + S R NL+Y+
Sbjct: 154 RQEYRQMRYLRQ-QFPQVPITALTATATVRVQRDIIEQLNLRNP-QIHRFSFNRQNLYYE 211
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V + + +Y + I G GI+YC +R+ T ++A+ L +
Sbjct: 212 V--QEKERRAYNQLLHIIRSHQG-------SGIVYCISRKSTEEIAERLVKDGVSALPYH 262
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS Q SF+R ++ ++ AT++FGMGI++ +VR VVH+ +P +I +YYQESGRA
Sbjct: 263 AGLSDKVRSHYQTSFIRDDVRIMVATVAFGMGINKPDVRLVVHYDLPRNIESYYQESGRA 322
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
GRDG ++ C + +S K+ + Y I+ T+ + +++ + ++EY + Y
Sbjct: 323 GRDGEKANCILLYSRGDKQKIHYFIRQKTNPQEQKIA--YAQLAKVIEYADTNY 374
>gi|397169212|ref|ZP_10492647.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
gi|396089292|gb|EJI86867.1| ATP-dependent DNA helicase [Alishewanella aestuarii B11]
Length = 605
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 218/410 (53%), Gaps = 55/410 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L A LK FG+ S++ Q+ I +L+ D FV +PTG G + +
Sbjct: 3 EQLLAVLKQSFGYSSWRSGQQE--IISAVLQGRDCFVLLPTGG----GKSLCYQLPALQL 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP++S K + + R++ + S ++
Sbjct: 57 PGVTLV-----------VSPLMSLM-------KDQVDSLRANGIAAAYVNSSLSREAVLD 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L +LR + +KLLYV PER + SF LQ + ++ +DEAHC+S+WGHDFRP
Sbjct: 99 VLNQLRYGE--LKLLYVAPERLLQPSFLERLQEV----GVSLFAIDEAHCISQWGHDFRP 152
Query: 214 TYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
Y L +L+Q F G +P IALTATA+P+ +QDI+ L + PY + + S R N+ Y V
Sbjct: 153 DYMALSQLKQRFPG--VPFIALTATADPATQQDILQQLGLSNPY-IHRGSFDRPNIRYTV 209
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK------ 326
++ + +++ + ++N++ GIIYC +R +L L+ + K
Sbjct: 210 ------QEKFRPLEQLLAYLKQQENQS---GIIYCSSRRKVDELTAQLQERGYKVAAYHA 260
Query: 327 ----HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
ER RVQ++F R +IN+I AT++FGMG+D+ N+RFVVH+ +P +I AYYQE+GRAG
Sbjct: 261 GHDSTERQRVQDAFKRDDINLIVATVAFGMGVDKPNIRFVVHFELPRTIEAYYQETGRAG 320
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG+ + + ++ ++ + + R E+ ++ +LSM + E
Sbjct: 321 RDGVAAEAVLLFDPADIGRMKRWLEAEENPGRA--EVVWQRFLSMAAFAE 368
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 208/406 (51%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q +AI +LL D FV MPTG G + + + PG +
Sbjct: 697 FGLHHFRTN-QLEAINAVLL-GEDCFVLMPTGG----GKSLCYQLPACVSPGVTIV---- 746
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ I+ L L++ + +T +E I +L
Sbjct: 747 -------ISPL-----------RSLIIDQVQKLTSLDIPATYLTGDKTDSEAANIYLQLS 788
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 789 KKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRL 848
Query: 219 GELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LR +F S+ ++ALTATA P V++DI++ LK P +VF S R NL Y V+
Sbjct: 849 NMLRHKFP--SVSMMALTATANPRVQKDILTQLKILNP-QVFSMSFNRHNLKYSVLPKKP 905
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
K ++ + E+I K + ++ GIIYC +R +AD L++ ++
Sbjct: 906 KKVAFDCL-EWIRK-----HHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDS 959
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ YYQESGRAGRDG
Sbjct: 960 ARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGE 1019
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C ++++ H L+ +I + + F N SM+ YCE
Sbjct: 1020 MSHCLLFYNYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCE 1065
>gi|300771774|ref|ZP_07081645.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
gi|300761160|gb|EFK57985.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
Length = 729
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 207/394 (52%), Gaps = 49/394 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E+ L L+ FGFD+FK + ++AI +L D FV MPTG G + + +
Sbjct: 4 EKSLFDNLQDFFGFDTFKGD--QEAIITNVLNKKDTFVIMPTGG----GKSICYQLPALM 57
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ G + + S K E
Sbjct: 58 SQGTAIV-----------ISPLIA--LMKNQVDQLRAFGGTDSIAHF--LNSSLNKGEIT 102
Query: 153 AILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++ + + KLLYV PE + E+ +L Q V +++ VDEAHC+SEWGHDF
Sbjct: 103 KVKQDV--TQGKTKLLYVAPESLSKDENIEFLRQITV-----SFVAVDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ ++ G +IPIIALTATA P V+ DI L+ +FK+S R+NL+Y+
Sbjct: 156 RPEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMTDA-TLFKSSFNRTNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR---------- 321
V K+ + FI+ N + GI+YC +R+ ++A+ L
Sbjct: 215 V---RTKKNVVKEIVRFIK------NNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYH 265
Query: 322 RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R+ Q+ F+ ++ VI ATI+FGMGID+ +VR+V+H +P S+ YYQE+GRA
Sbjct: 266 AGLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + C ++SE + L +K ++RE
Sbjct: 326 GRDGGEGVCVTFYSEKDVEKLTKFMKDKPVSERE 359
>gi|255531959|ref|YP_003092331.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
gi|255344943|gb|ACU04269.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
Length = 729
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/399 (33%), Positives = 211/399 (52%), Gaps = 59/399 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLV----GSVVSARS 88
++ L L+ FGFD+FK + Q+ I ++L + + FV MPTG + ++++ +
Sbjct: 4 KKSLFDNLQTFFGFDNFKGD-QESIITNVLEKKN-TFVIMPTGGGKSICYQLPALINEGT 61
Query: 89 RVRIPPGADFILN--GNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ I P + N +R+ G S + +L +KT I +SDL ++GQ
Sbjct: 62 AIVISPLIALMKNQVDQLRAFGGSDS---IAHFLNSSLNKTEITQVKSDL------LNGQ 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE + L+ + K++++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLSKQDNIDFLKLI----KISFVAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YR++ ++ G IPIIALTATA P V+QDII L + +FK+S R
Sbjct: 151 WGHDFRPEYRKIRQVISGLGEGIPIIALTATATPKVQQDIIKNLGMSDA-TLFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----R 322
NLFY++ +D + +I+ GK GIIYC +R+ ++A++L +
Sbjct: 210 NLFYEI---RPKRDVLKEIIRYIKYNTGK------SGIIYCLSRKKVEEVAESLNLNGIK 260
Query: 323 KVNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ H R+ Q+ F+ ++ VI ATI+FGMGID+ +VRFV+H +P S+ YYQ
Sbjct: 261 ALPYHAGLEPKVRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C ++++ L +K ++RE
Sbjct: 321 ETGRAGRDGGEGVCIAFYAQKDVDKLAKFMKDKPVSERE 359
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 212/425 (49%), Gaps = 61/425 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 433 RKLEVNNKKVFGNHSFR--PNQREIINATMSGSDVFVLMPTGG----GKSLTYQLPALIC 486
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP++S + + + + S + +G E
Sbjct: 487 GGITLV-----------ISPLVSLIQDQIMNLLQANIPAAS-------LSAGMEWAEQLK 528
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHD 210
I +EL + KLLYVTPE+ LL+HL N LA V+DEAHCVS+WGHD
Sbjct: 529 IFQELNSEHSKYKLLYVTPEKVAKSD--SLLRHLENLNSRGLLARFVIDEAHCVSQWGHD 586
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y
Sbjct: 587 FRPDYQSLGILKQKFPN-IPVLALTATATASVKEDVVQALGLVNCV-VFRQSFNRPNLWY 644
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
V+ K + +FI K+N + CGIIYC +R +++ L+
Sbjct: 645 SVV--PKTKKCLEDIDKFI-----KENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFY 697
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +R+ +Q + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 698 HGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 757
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD-------------TSTKREQLELKFKNYLSM 427
AGRDG +S C +Y+ ++++I ++ LE +N L M
Sbjct: 758 AGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRM 817
Query: 428 LEYCE 432
+ YCE
Sbjct: 818 VRYCE 822
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 212/425 (49%), Gaps = 61/425 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 439 RKLEVNNKKVFGNHSFR--PNQREIINATMSGSDVFVLMPTGG----GKSLTYQLPALIC 492
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP++S + + + + S + +G E
Sbjct: 493 GGITLV-----------ISPLVSLIQDQIMNLLQANIPAAS-------LSAGMEWAEQLK 534
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHD 210
I +EL + KLLYVTPE+ LL+HL N LA V+DEAHCVS+WGHD
Sbjct: 535 IFQELNSEHSKYKLLYVTPEKVAKSD--SLLRHLENLNSRGLLARFVIDEAHCVSQWGHD 592
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y
Sbjct: 593 FRPDYQSLGILKQKFPN-IPVLALTATATASVKEDVVQALGLVNCV-VFRQSFNRPNLWY 650
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
V+ K + +FI K+N + CGIIYC +R +++ L+
Sbjct: 651 SVV--PKTKKCLEDIDKFI-----KENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFY 703
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +R+ +Q + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 704 HGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 763
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTD-------------TSTKREQLELKFKNYLSM 427
AGRDG +S C +Y+ ++++I ++ LE +N L M
Sbjct: 764 AGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRM 823
Query: 428 LEYCE 432
+ YCE
Sbjct: 824 VRYCE 828
>gi|345882276|ref|ZP_08833781.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
gi|343918032|gb|EGV28804.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
Length = 725
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 199/379 (52%), Gaps = 49/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGFD FK + ++AI L+ +D FV MPTG G + + + G
Sbjct: 7 LAKQLKHYFGFDQFKGD--QEAIIQNLMAGNDTFVLMPTGG----GKSLCYQLPSLLMEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ +SP+++ ++ ++ SD L + S TKT + +
Sbjct: 61 TAIV-----------VSPLIA-----LMKNQVDVMNSLSDEPCLAHCLNSSLTKTAVQKV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE E LQ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 105 MDDIR--SGRTKLLYVAPESLTKEETVAFLQTI----KISFYAVDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR + + GN+ P+IALTATA V+ DI L K F++S R NL+Y+V
Sbjct: 159 YRNIRPIINRIGNA-PVIALTATATDKVRSDIKKSLGIADA-KEFRSSFNRPNLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE------ 328
D + +FI + GK GIIYC +R+ +LA+ LR K
Sbjct: 215 RPKTNDIDKQIIKFIRQNAGK------SGIIYCLSRKKVEELAEILRANDIKAAPYHAGL 268
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
RS+ Q+ F+ ++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRD
Sbjct: 269 ESGVRSQTQDDFLMERLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++++ K LE
Sbjct: 329 GGEGQCIAFYAQKDLKKLE 347
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 202/387 (52%), Gaps = 47/387 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D T++ L ++ + E ++++
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRERESLI---- 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 106 -LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIK 164
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 165 QVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--QPKTS 220
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
SY + ++I+ G GI+YC +R+ +A+ L++ ++ ER
Sbjct: 221 KSYQQLYQYIKGQKG-------SGIVYCISRKTVDKVAEQLQKDGIDALPYHAGMDDRER 273
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S Q F+R ++ ++ ATI+FGMGI++ +VRFVVH+ +P ++ YYQESGRAGRDG +
Sbjct: 274 SENQTRFIRDDVQIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAK 333
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 334 CTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|384047158|ref|YP_005495175.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium WSH-002]
gi|345444849|gb|AEN89866.1| ATP-dependent DNA helicase RecQ [Bacillus megaterium WSH-002]
Length = 711
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 143/420 (34%), Positives = 221/420 (52%), Gaps = 57/420 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ LT L++ FG+DSF+ + Q+++IR++L H+ MPTG G + +I
Sbjct: 4 EQALT-HLQSYFGYDSFR-KGQEESIRYVL-EGHNTACIMPTGG----GKSLC----YQI 52
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P +L G ISP++S K + T + I S T TE +
Sbjct: 53 P---SLLLEGTTL----VISPLISLM-------KDQVDTLNAAGIPATYINSSLTHTEVQ 98
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
LEE+ L KLLYV PER + F LQ L + + VDEAHC+S+WGHDFR
Sbjct: 99 QRLEEVAL--GEYKLLYVAPERLESPQFLEQLQML----PIPLVAVDEAHCISQWGHDFR 152
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+Y R+ +L N+ ++ LTATA P V++DI L N+ Y V T R NL + V
Sbjct: 153 PSYLRISDLITKLSNAPIVMGLTATATPQVREDICRALHINEEYTVM-TGFERENLSFAV 211
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +D +++ ++I K D +A GIIY TR+ +L L++
Sbjct: 212 VKG---QDRISYIDQYIRK---NDQEA---GIIYAATRKDVEELHARLQKSGVNVSKYHA 262
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ + R Q F++ ++ V+ AT +FGMGID+ N+RFV+H+ +P ++ +YYQE+GRAG
Sbjct: 263 GMSANSRDEEQNRFLQDDVQVMIATSAFGMGIDKSNIRFVLHYQLPKNMESYYQEAGRAG 322
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE-----QGYFL 437
RDGL S C + +S + ++I+ TS ++Q++ + +M+ YC Q Y L
Sbjct: 323 RDGLPSECIVLYSPQDIRVQRFLIEQSTSNPKKQIQ-DLEKLQNMVNYCHTEGCLQAYIL 381
>gi|145220257|ref|YP_001130966.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
gi|145206421|gb|ABP37464.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
Length = 622
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 200/400 (50%), Gaps = 53/400 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
VSE+ + L+ +FGF F+ Q++ +R LL D+F MPTG G + +
Sbjct: 12 VSEEAMHDALQKVFGFKGFRPN-QREVVR-ALLDGRDVFAVMPTGG----GKSLCYQLPA 65
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ PG + ISP+++ K + R++ + + S + +
Sbjct: 66 VLLPGTCMV-----------ISPLIALM-------KDQVDGARANGIRAAYLNSSLSLAD 107
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ +L+EL + LLYV PER +SF L+ + ++ V+DEAHC+SEWGHD
Sbjct: 108 RRKVLDELE--SGSLDLLYVAPERFALDSFRKLIGKV----PVSMAVIDEAHCISEWGHD 161
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y +L L +P+ TATA V+ D + L +P+ V + S R NL Y
Sbjct: 162 FRPDYLQLSSLVTMF-RDVPVAGFTATATQRVQLDTLRRLALREPFTV-RASFDRPNLTY 219
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
V+F D + A + + GK GIIY +R+ D A L+ K
Sbjct: 220 SVLFKDGVD---AQIVSLLRAHSGK------AGIIYRTSRKSVNDTAAMLQAKGFRALAY 270
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER R Q +F+R E++VI ATI+FGMGID+ N+RFV+H MP SI YYQE+GR
Sbjct: 271 HAGLGDEERERNQNAFIRDEVDVIVATIAFGMGIDKSNIRFVIHADMPKSIENYYQETGR 330
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKT--DTSTKREQLE 418
AGRDG ++C + S+ + L + I T D K LE
Sbjct: 331 AGRDGEPAHCTLLFSQGDQAKLRFFIDTMEDEGEKARALE 370
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 200/375 (53%), Gaps = 48/375 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L A K +FG SF+ ++ + + + +D+FV MPTG G ++ + +
Sbjct: 444 KKLEANNKKVFGNHSFR--PNQREVINATMSGYDVFVLMPTGG----GKSLTYQLPALVC 497
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ + + TE +
Sbjct: 498 PGITLV-----------ISPLVS----LIQDQIMHLLQAN---IPAAYLSANMEWTEQQE 539
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHD 210
IL EL + +LLYVTPE+ LL++L N LA IV+DEAHCVS+WGHD
Sbjct: 540 ILRELCSDYCKYRLLYVTPEKVAKSDV--LLRNLESLNGRGLLARIVIDEAHCVSQWGHD 597
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L++ P++ALTATA SVK+D++ L VF+ S R NL+Y
Sbjct: 598 FRPDYKELGILKK-KFEKTPVLALTATATASVKEDVVQALGLVDCI-VFRQSFNRPNLWY 655
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
VI K + +FI K+N + CGIIYC +R +A+ L+
Sbjct: 656 SVI--PKTKKCLEDIDKFI-----KENHFDECGIIYCLSRMDCEKVAEKLQECGHKTAFY 708
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +RS VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 709 HGNMDAAQRSFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 768
Query: 381 AGRDGLQSYCRIYHS 395
AGRDG +S C +Y+S
Sbjct: 769 AGRDGQRSSCVLYYS 783
>gi|355778305|gb|EHH63341.1| Bloom syndrome protein [Macaca fascicularis]
Length = 1338
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 175/305 (57%), Gaps = 21/305 (6%)
Query: 141 LIVSG-QTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVV 198
L+ +G +T +E I +L P IKLLYVTPE+ + L++L LA V+
Sbjct: 714 LMPTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVI 773
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHCVS+WGHDFR Y+R+ LRQ S+P++ALTATA P V++DI++ LK +P +V
Sbjct: 774 DEAHCVSQWGHDFRQDYKRMNMLRQ-KFPSVPVMALTATANPRVQKDILTQLKILRP-QV 831
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
F S R NL Y V+ K ++ + E+I K D+ GIIYC +R +AD
Sbjct: 832 FSMSFNRHNLKYYVLPKKPKKVAFDCL-EWIRKHYPYDS-----GIIYCLSRRECDTMAD 885
Query: 319 ALRRK----------VNKHERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGM 367
L+R ++ R VQ+ ++ + VI ATI+FGMGID+ +VRFV+H +
Sbjct: 886 TLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASL 945
Query: 368 PSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSM 427
P S+ YYQESGRAGRDG S+C ++++ H L+ +I + E F N SM
Sbjct: 946 PKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSM 1005
Query: 428 LEYCE 432
+ YCE
Sbjct: 1006 VHYCE 1010
>gi|67924781|ref|ZP_00518182.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|416405865|ref|ZP_11687987.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
gi|67853376|gb|EAM48734.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|357261215|gb|EHJ10512.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
Length = 710
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/393 (34%), Positives = 206/393 (52%), Gaps = 49/393 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ QK+ I L D+ V MPTG G + + + PG
Sbjct: 8 LENALKDHFGYDQFRPG-QKQIITEAL-NNKDLLVIMPTGG----GKSLCFQLPALLKPG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAI 154
+ +SP+++ +D S++ G + + Q K+ +I
Sbjct: 62 LCIV-----------VSPLIA----LMQDQVDSLLDNGIGATFLNSTLSREQLKSRENSI 106
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L +IKLLYV PER + +SF L L + L+ +DEAHCVS WGHDFRP
Sbjct: 107 L------NGKIKLLYVAPERLLNDSFLNFLDFLNQKIGLSSFAIDEAHCVSAWGHDFRPE 160
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L +LR F ++P++ALTATA V++DII L KP V S R NL+Y+V
Sbjct: 161 YRQLKQLR-FRYPTVPVVALTATATKRVREDIIEQLGLEKP-SVHLASFDRPNLYYEV-- 216
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ SYA + +I G GI+YC +R++ +A L++ +
Sbjct: 217 QQKSRRSYAQLLNYIRSQEGS-------GIVYCLSRKNVETVAFRLQQDGIEALPYHAGM 269
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ER+ Q F+R ++ +I AT++FGMGI++ +VRFVVH+ +P ++ +YYQESGRAGRD
Sbjct: 270 YDDERATNQTRFIRDDVRIIVATVAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRD 329
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
G + C ++ S K ++Y+I +S K +++
Sbjct: 330 GEPANCALFLSFGDLKKIDYLIDQKSSPKEQKI 362
>gi|375109707|ref|ZP_09755949.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
gi|374570229|gb|EHR41370.1| ATP-dependent DNA helicase [Alishewanella jeotgali KCTC 22429]
Length = 605
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 218/410 (53%), Gaps = 55/410 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L A LK FG+ S++ Q+ I +L+ D FV +PTG G + +
Sbjct: 3 EQLLAVLKQSFGYSSWRNGQQE--IISAVLQGRDCFVLLPTGG----GKSLCYQLPALQL 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP++S K + + R++ + S ++
Sbjct: 57 PGVTLV-----------VSPLMSLM-------KDQVDSLRANGIAAAYVNSSLSREAVLD 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L +LR + +KLLYV PER + SF LQ + ++ +DEAHC+S+WGHDFRP
Sbjct: 99 VLNQLRYGE--LKLLYVAPERLLQPSFLERLQEV----GVSLFAIDEAHCISQWGHDFRP 152
Query: 214 TYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
Y L +L+Q F G +P IALTATA+P+ +QDI+ L + PY + + S R N+ Y V
Sbjct: 153 DYMALSQLKQRFPG--VPFIALTATADPATQQDILQQLGLSNPY-IHRGSFDRPNIRYTV 209
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK------ 326
++ + +++ + ++N++ GIIYC +R +L L+ + K
Sbjct: 210 ------QEKFRPLEQLLAYLKQQENQS---GIIYCSSRRKVDELTAQLQERGYKVAAYHA 260
Query: 327 ----HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
ER RVQ++F R +IN+I AT++FGMG+D+ N+RFVVH+ +P +I AYYQE+GRAG
Sbjct: 261 GHDSTERQRVQDAFKRDDINLIVATVAFGMGVDKPNIRFVVHFELPRTIEAYYQETGRAG 320
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG+ + + ++ ++ + + R E+ ++ +LSM + E
Sbjct: 321 RDGVAAEAVLLFDPADIGRMKRWLEAEENPGRA--EVVWQRFLSMAAFAE 368
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 202/391 (51%), Gaps = 47/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L D+ V MPTG G + + I G
Sbjct: 7 LEKALKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ +D T++ L ++ + E ++++
Sbjct: 61 VTVV-----------VSPLIALM----QDQVTALADNGIGATFLNSTLNAKQVRERESLI 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP Y
Sbjct: 106 -----LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ ++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 161 RQIKQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--Q 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
SY + ++I+ G GI+YC +R+ +A+ L++ +
Sbjct: 217 PKTSKSYQQLYQYIKGQKG-------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGME 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS Q F+R ++ ++ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG
Sbjct: 270 DRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S + +EY I T +Q
Sbjct: 330 EPAKCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 211/389 (54%), Gaps = 52/389 (13%)
Query: 63 LRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLR 121
L D FV MPTG SL + S + +G+ R +SP+LS +
Sbjct: 745 LSGKDTFVLMPTGGGKSLCYQLPS------------IVTSGSTRGVTIVVSPLLSLMQDQ 792
Query: 122 FRDDKTSIVTGRSDLYQLEL---IVSGQTKTENKA-ILEELR--LVKPRIKLLYVTPERA 175
S L +L++ +++G+TK E + I++ L + +I+LLY+TPE
Sbjct: 793 V-----------SHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMV 841
Query: 176 -VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIA 233
+++ L+ L R +LA IV+DEAHCVS+WGHDFRP Y+ LGE+R Q G +P++A
Sbjct: 842 NKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG--VPMMA 899
Query: 234 LTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCL 293
LTATA +VK D+I LK ++F S R NL Y+V K A V E I +
Sbjct: 900 LTATATENVKVDVIHNLKMEG-CEIFTQSFNRPNLTYEV----RQKTKSAEVLENIADII 954
Query: 294 GKDNKANNCGIIYCRTREHTTDLADALRRKVN-----------KHERSRVQESFMRGEIN 342
K + N GIIYC +R+ +A+AL + N +R+ VQE + G ++
Sbjct: 955 -KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1013
Query: 343 VITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSL 402
VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y+S S+
Sbjct: 1014 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1073
Query: 403 EYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+I K +Q + + ++++YC
Sbjct: 1074 MSMIDKGEGGK-QQKNRQRQMLRNVMQYC 1101
>gi|323453683|gb|EGB09554.1| hypothetical protein AURANDRAFT_2515, partial [Aureococcus
anophagefferens]
Length = 415
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 203/409 (49%), Gaps = 46/409 (11%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q++AIR L D+ V +PTG G + + + PG +
Sbjct: 1 FGHGSFR-PGQQRAIRGAL-HGRDVVVVLPTGG----GKSLCYQLPALLTPGVTIV---- 50
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKP 163
+SP+LS D ++++ + SG + ++++L EL
Sbjct: 51 -------VSPLLSLI----EDQVSALLGAACGGIPAAHLTSGTKEAASRSVLHELHKAGE 99
Query: 164 R-----IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+KLLYVTPER A + +F L L R LA VVDEAHCVSEWGHDFRP YR+
Sbjct: 100 GRGELGLKLLYVTPERLAASPTFGECLAKLHRRRLLARFVVDEAHCVSEWGHDFRPDYRK 159
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG LR+ + +P +ALTATA P+ + D+ LK +TS+ R NL + V +D
Sbjct: 160 LGNLRR-SYPGVPFMALTATATPACEADLRKSLKIAPDALAHRTSSDRPNLHFAV--EDY 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE--------- 328
+ V+E + + + + CGI+YC T+ AD L + + +
Sbjct: 217 SEGDANDVREAVVDFVKR--RPGQCGIVYCMTQADAEACADLLSERCDDVKAAHYHAGLS 274
Query: 329 ---RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R Q ++ G+++V+ ATI++GMGID+ +VR+VVH + S+ YYQE+GRAGRDG
Sbjct: 275 PLNRRVTQAAWQAGQVHVVCATIAYGMGIDKADVRYVVHASLAKSLEGYYQEAGRAGRDG 334
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKRE--QLELKFKNYLSMLEYCE 432
S C +Y+ + ++ KR +L+ M+ YCE
Sbjct: 335 APSLCALYYRRQDVAKIRKLVTGFGRMKRRGPRLQRDLDKLDDMVRYCE 383
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 211/389 (54%), Gaps = 52/389 (13%)
Query: 63 LRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLR 121
L D FV MPTG SL + S + +G+ R +SP+LS +
Sbjct: 747 LSGKDTFVLMPTGGGKSLCYQLPS------------IVTSGSTRGVTIVVSPLLSLMQDQ 794
Query: 122 FRDDKTSIVTGRSDLYQLEL---IVSGQTKTENKA-ILEELR--LVKPRIKLLYVTPERA 175
S L +L++ +++G+TK E + I++ L + +I+LLY+TPE
Sbjct: 795 V-----------SHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMV 843
Query: 176 -VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIA 233
+++ L+ L R +LA IV+DEAHCVS+WGHDFRP Y+ LGE+R Q G +P++A
Sbjct: 844 NKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG--VPMMA 901
Query: 234 LTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCL 293
LTATA +VK D+I LK ++F S R NL Y+V K A V E I +
Sbjct: 902 LTATATENVKVDVIHNLKMEG-CEIFTQSFNRPNLTYEV----RQKTKSAEVLENIADII 956
Query: 294 GKDNKANNCGIIYCRTREHTTDLADALRRKVN-----------KHERSRVQESFMRGEIN 342
K + N GIIYC +R+ +A+AL + N +R+ VQE + G ++
Sbjct: 957 -KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1015
Query: 343 VITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSL 402
VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y+S S+
Sbjct: 1016 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1075
Query: 403 EYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+I K +Q + + ++++YC
Sbjct: 1076 MSMIDKGEGGK-QQKNRQRQMLRNVMQYC 1103
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 205/381 (53%), Gaps = 47/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E ++ +LK FGF+ FK LQ++ I+ I+ + H+ FV MPTG G + + +
Sbjct: 5 EIDIHKELKKYFGFNQFKG-LQEQVIKSIVAK-HNSFVIMPTGG----GKSLCYQLPALM 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ +I + S+ ++ S TKTE
Sbjct: 59 QGGTAIV-----------VSPLIA----LMKNQVDAIRSLSSEAGIAHVLNSSLTKTEIA 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ +++ KLLYV PE E + LQ K++++ +DEAHC+SEWGHDFR
Sbjct: 104 QVKKDIS--SGLTKLLYVAPESLTKEEYVTFLQK----EKISFVAIDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR L + + G+ +PII LTATA P V++DI+ L FK S R NL+Y+V
Sbjct: 158 PEYRNLKNIIKLLGD-VPIIGLTATATPKVQEDILKNLDMANA-NTFKASFNRPNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K+ + + FI++ GK GIIYC +R+ +A L+
Sbjct: 216 RTK--TKNVESDIIRFIKQHKGK------SGIIYCLSRKKVEAIAQVLQVNGISAVPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C Y+S + LE
Sbjct: 328 RDGGEGHCLAYYSYKDVEKLE 348
>gi|165920611|ref|ZP_02219582.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii Q321]
gi|165916813|gb|EDR35417.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii Q321]
Length = 601
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 205/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG + + A R G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGGGKSLCYQIPALVR----EGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE +A R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAEARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P IALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFIALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIRYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
Y + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KPYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADGYSALPYHAGLPAAQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 202/391 (51%), Gaps = 47/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L D+ V MPTG G + + I G
Sbjct: 7 LEKALKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ +D T++ L ++ + E ++++
Sbjct: 61 VTVV-----------VSPLIALM----QDQVTALADNGIGATFLNSTLNAKQVRERESLI 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP Y
Sbjct: 106 -----LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ ++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 161 RQIKQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--Q 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
SY + ++I+ G GI+YC +R+ +A+ L++ +
Sbjct: 217 PKTSKSYQQLYQYIKGQKG-------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGME 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS Q F+R ++ ++ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG
Sbjct: 270 DRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S + +EY I T +Q
Sbjct: 330 EPAKCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|326789234|ref|YP_004307055.1| ATP-dependent DNA helicase RecQ [Clostridium lentocellum DSM 5427]
gi|326539998|gb|ADZ81857.1| ATP-dependent DNA helicase RecQ [Clostridium lentocellum DSM 5427]
Length = 733
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 57/404 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+D+F+ Q++ I+ IL D MPTG + V A +
Sbjct: 7 LKKYYGYDAFRPG-QEELIQAIL-SGKDALGIMPTGGGKSICYQVPA-----------LL 53
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G ISP++S K + T + + ELI S + E + I R
Sbjct: 54 LDGVTI----VISPLISLM-------KDQVDTLKEYGIEAELINSTLSTKEFREIRANAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ KLLYV PER TESF L+R ++ + VDEAHCVS+WGHDFRP+YRR+
Sbjct: 103 M--GAYKLLYVAPERLETESF----MDLIREVPVSMVAVDEAHCVSQWGHDFRPSYRRVS 156
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDV-IFDDL 277
++ + A TATA P VK+DII +L+ NKP+++ TS+F R NL+++V ++
Sbjct: 157 QILYALPKRPIVAAFTATATPLVKEDIIKLLELNKPFEL--TSSFDRPNLYFEVRKPENK 214
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKH 327
L ++ +++E + G+IYC TR+ DL + L R +++
Sbjct: 215 LHETEMYLREHV----------GESGVIYCATRKGVDDLYERLLRLGLPCTKYHAGLSEA 264
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ERS Q+ F+ ++V+ AT +FGMGID+ NVRFV+H+ MP ++ YYQE+GRAGRDG +
Sbjct: 265 ERSSNQDDFLYDRVSVMIATNAFGMGIDKPNVRFVLHYNMPKNMEGYYQEAGRAGRDGEE 324
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+ C + + Y+I+ R ++++ SM++YC
Sbjct: 325 AQCILLFGTQDIMTNRYLIENANGLGR---QIEYDKLNSMVDYC 365
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 215/425 (50%), Gaps = 61/425 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 437 RKLEVNNKKVFGNHSFR--PNQREIINATMSGSDVFVLMPTGG----GKSLTYQLPALIC 490
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP++S + + + + S + +G E
Sbjct: 491 GGITLV-----------ISPLVSLIQDQIMNLLQANIPAAS-------LSAGMEWAEQLK 532
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNK---LAYIVVDEAHCVSEWGHD 210
I +EL + KLLYVTPE+ LL+HL N LA V+DEAHCVS+WGHD
Sbjct: 533 IFQELNSEHSKYKLLYVTPEKVAKSD--SLLRHLENLNSRGLLARFVIDEAHCVSQWGHD 590
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q N IP++ALTATA SVK+D++ L VF+ S R NL+Y
Sbjct: 591 FRPDYQSLGILKQKFPN-IPVLALTATATASVKEDVVQALGLVNCV-VFRQSFNRPNLWY 648
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
V+ K + +FI K+N + CGIIYC +R +++ L+
Sbjct: 649 SVV--PKTKKCLEDIDKFI-----KENHFDECGIIYCLSRMDCEKVSERLQEFGHKTAFY 701
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +R+ +Q + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 702 HGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 761
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVI------KTDTSTKREQ-------LELKFKNYLSM 427
AGRDG +S C +Y+ ++++I ++ +T + LE +N L M
Sbjct: 762 AGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASLGRILETNTENLLRM 821
Query: 428 LEYCE 432
+ YCE
Sbjct: 822 VSYCE 826
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 142/389 (36%), Positives = 211/389 (54%), Gaps = 52/389 (13%)
Query: 63 LRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLR 121
L D FV MPTG SL + S + +G+ R +SP+LS +
Sbjct: 745 LSGKDTFVLMPTGGGKSLCYQLPS------------IVTSGSTRGVTIVVSPLLSLMQDQ 792
Query: 122 FRDDKTSIVTGRSDLYQLEL---IVSGQTKTENKA-ILEELR--LVKPRIKLLYVTPERA 175
S L +L++ +++G+TK E + I++ L + +I+LLY+TPE
Sbjct: 793 V-----------SHLKRLKIKAFLLNGETKQEERQWIMQTLSGPAAEEQIELLYITPEMV 841
Query: 176 -VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIA 233
+++ L+ L R +LA IV+DEAHCVS+WGHDFRP Y+ LGE+R Q G +P++A
Sbjct: 842 NKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRDQLPG--VPMMA 899
Query: 234 LTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCL 293
LTATA +VK D+I LK ++F S R NL Y+V K A V E I +
Sbjct: 900 LTATATENVKVDVIHNLKMEG-CEIFTQSFNRPNLTYEV----RQKTKSAEVLENIADII 954
Query: 294 GKDNKANNCGIIYCRTREHTTDLADALRRKVN-----------KHERSRVQESFMRGEIN 342
K + N GIIYC +R+ +A+AL + N +R+ VQE + G ++
Sbjct: 955 -KTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSGRVH 1013
Query: 343 VITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSL 402
VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y+S S+
Sbjct: 1014 VIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDATSI 1073
Query: 403 EYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+I K +Q + + ++++YC
Sbjct: 1074 MSMIDKGEGGK-QQKNRQRQMLRNVMQYC 1101
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/391 (32%), Positives = 202/391 (51%), Gaps = 47/391 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L D+ V MPTG G + + I G
Sbjct: 7 LEKALKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ +D T++ L ++ + E ++++
Sbjct: 61 VTVV-----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRERESLI 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP Y
Sbjct: 106 -----LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ ++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 161 RQIKQVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--Q 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
SY + ++I+ G GI+YC +R+ +A+ L++ +
Sbjct: 217 PKTSKSYQQLYQYIKGQKG-------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGME 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS Q F+R ++ ++ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG
Sbjct: 270 DRERSNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+ C ++ S + +EY I T +Q
Sbjct: 330 EPAKCTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 207/393 (52%), Gaps = 49/393 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ ++ I L D+ V MPTG G + + + PG
Sbjct: 8 LETALKQYFGYDNFRP--GQREIIEEALENRDLLVIMPTGG----GKSLCFQLPALLKPG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAI 154
+ +SP++S +D +++ G + + + ++ AI
Sbjct: 62 VTVV-----------VSPLISLM----QDQVDALLDNGIGATFLNSSLDFSEIRSRETAI 106
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L + +IKLLYV PER ++E F L + + ++ +DEAHCVSEWGHDFRP
Sbjct: 107 L------RNKIKLLYVAPERLLSEKFTPFLDTIAQQVGISAFAIDEAHCVSEWGHDFRPE 160
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L +LR+ N +P+ ALTATA V+QDII L P + S R+NL+YD+
Sbjct: 161 YRQLRQLRKRYPN-VPMFALTATATKRVQQDIILQLDLKNP-GIHIASFNRTNLYYDIKP 218
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ K SY + ++I G GI+YC +R + ++A L+ +
Sbjct: 219 KE--KRSYNQLLKYIRAHQG-------SGIVYCMSRRNVDEIAFRLQNDGISALPYHAGL 269
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R+ Q F+R ++ V+ AT++FGMGI++ +VRFVVH+ +P ++ +YYQESGRAGRD
Sbjct: 270 TDEARTLNQTRFIRDDVRVMVATVAFGMGINKPDVRFVVHFDLPRNLESYYQESGRAGRD 329
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
G + C + +S K +EY+I+ T+ + +++
Sbjct: 330 GEPAKCLLLYSLGDLKKIEYIIEQKTNPQEQKI 362
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 219/407 (53%), Gaps = 56/407 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
F SF+ Q KAI + L D+F+ MPTG + + A + +G
Sbjct: 491 FRLSSFRPN-QLKAI-NATLAADDVFILMPTGGGKSLCYQLPA-----------VVQSGK 537
Query: 104 VRSRNGWISPILSSFYLRFRD--DKTSIVTG-RSDLYQLELIVSGQTKTENKAILEELRL 160
R + ISP+LS + + + DK I SDL K++ ++ ELR
Sbjct: 538 TRGVSIVISPLLSLIHDQCQALMDKDVIALAFNSDL----------KKSDRDFVINELRT 587
Query: 161 VK--PRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
R L+YVTPE A + F +L++L R +LA V+DEAHC+S WG DFRP Y+
Sbjct: 588 ADDDTRPCLIYVTPEMIAKSTLFKDVLRNLHRRQRLARFVIDEAHCISSWGFDFRPDYKE 647
Query: 218 LGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
LG + R++ G +PI+ALTATA VKQD+I+ L N V S R NL Y+V
Sbjct: 648 LGSIKREYPG--VPIMALTATANERVKQDVITSLGINDCL-VLSQSFNRPNLRYEVRPKG 704
Query: 277 --LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------- 323
++KD + + I++ + A CGIIYC +++ D+A+AL+ +
Sbjct: 705 KLIIKD----ISDLIKR-----DFAGLCGIIYCLSKKQCEDIAEALKTQHGVKAHHYHAG 755
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ K +R R+Q + RG+I+V+ ATI+FGMGID+ NVRFV+H+ + S+ AYYQE+GRAGR
Sbjct: 756 MAKDDRIRIQADWQRGKIHVVCATIAFGMGIDKANVRFVLHFTISGSLEAYYQETGRAGR 815
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
DG S C +Y + + + L +I T + EQ + + + M++Y
Sbjct: 816 DGGDSVCILYFNFNDTRLLYRLIDTGEGS-HEQKQRQRAHVQDMVKY 861
>gi|393212620|gb|EJC98120.1| ATP-dependent DNA helicase [Fomitiporia mediterranea MF3/22]
Length = 914
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/416 (32%), Positives = 218/416 (52%), Gaps = 52/416 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
SE + ++ +FG++ +K + QK+ I +L D+FV PTG + +
Sbjct: 38 ASEGPNSTRMNVVFGYEGYKGK-QKEIIETAILGV-DVFVVAPTG--------MGKSACF 87
Query: 91 RIPPGADFILNGNVRSRNG---WISPILSSFYLRFRDDKTSIV------TGRSDLYQLEL 141
+IP A+ +NG +SP+L + ++D T + S L L +
Sbjct: 88 QIPAAAE---------KNGVTLIVSPLLGVVCVIRQNDFTEVWFLALMKNQVSRLQDLNI 138
Query: 142 IVSGQTK----TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
+ T E K I+ +LR P +LLY+TPE + F+ +++ L R +L +V
Sbjct: 139 PAASYTSDTLGPEKKKIIADLRSSCPTTRLLYLTPEMLSSAEFNKVVEKLCRRGELNRLV 198
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHC+SEWGHDFR YR+LG R+ + +PI+ALTA+A +V++DI++ L+ ++
Sbjct: 199 VDEAHCISEWGHDFRSVYRKLGSFRENYPD-VPIMALTASATKTVQEDIVNSLRMDRDRM 257
Query: 258 VFKTSTF-RSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTT 314
+ T F R NLFY+V + D ++ V +FI L K + GI+YCR R
Sbjct: 258 LRVTHPFNRENLFYEVRYSTDMSQEERMVDVFQFI-SLLHKRRGRPSSGIVYCRLRATCD 316
Query: 315 DLADALR----------RKVNKHERSRVQESFM-----RGEINVITATISFGMGIDRQNV 359
+LA LR R + E R + + G +V+ ATI+FGMGID+ +V
Sbjct: 317 ELARYLRCNGLSARPYHRGLKSRELDRTLQEWQEGGNGEGGCDVVVATIAFGMGIDKADV 376
Query: 360 RFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
R++VH+ +P S+ YYQE+GRAGRDG + C +Y++ + + +K + ++E
Sbjct: 377 RYIVHYDLPKSLEGYYQETGRAGRDGDPAKCVLYYTREDALAANFFVKKSYNDRKE 432
>gi|312129258|ref|YP_003996598.1| ATP-dependent DNA helicase recq [Leadbetterella byssophila DSM
17132]
gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM
17132]
Length = 773
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 205/393 (52%), Gaps = 50/393 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
EQ L LK +FGFD+F+ E Q+K I+ + + + FV MPTGA G + + +
Sbjct: 7 EQRLKQNLKEIFGFDNFRGE-QEKIIKSV-ISGKNTFVIMPTGA----GKSLCYQLPATV 60
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + ISP+++ ++ + D+ + + L S + +N
Sbjct: 61 LEGTAIV-----------ISPLIA--LMKNQVDQLTAYGINAQFLNSTLNKSEMNRVKND 107
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I KLLY+ PE E L+ K++++ VDEAHC+SEWGHDFR
Sbjct: 108 VI-------SGVCKLLYIAPESLTKEDNLEFLKKA----KISFVAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR++ ++ + ++PI+ALTATA P V+ DI L + +FKTS R+NL+Y+V
Sbjct: 157 PEYRKIKDIIENIDTALPIVALTATATPKVQLDIKKSLNMDDSV-IFKTSFNRANLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+++ + +F+ + GK GI+YC +R+ ++A+ L
Sbjct: 216 ---RPKQNAKKQLIKFVSQNRGK------SGIVYCLSRKKVEEIAELLNVNGFKALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R + Q++F+ +++ ATI+FGMGID+ +VRFVVH+ P S+ YYQE+GRAG
Sbjct: 267 GLDPEVRMKNQDAFLNENCDIVVATIAFGMGIDKPDVRFVVHYDAPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG+ C ++++ LE K T+R+
Sbjct: 327 RDGIDGTCLMFYALDDITKLEKFNKDKNVTERD 359
>gi|149276388|ref|ZP_01882532.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232908|gb|EDM38283.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 729
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/399 (34%), Positives = 210/399 (52%), Gaps = 59/399 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLV----GSVVSARS 88
++ L L+ FGFD+FK + Q+ I ++L + FV MPTG + +++S +
Sbjct: 4 KKSLFDNLQTFFGFDNFKGD-QESIITNVL-EKKNTFVIMPTGGGKSICYQLPALMSEGT 61
Query: 89 RVRIPPGADFILN--GNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ I P + N +R+ G S + +L +K I +SDL +SGQ
Sbjct: 62 AIVISPLIALMKNQVDQLRAFGGSDS---IAHFLNSSLNKAEITQVKSDL------LSGQ 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE + L+ + K++++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLGKQDNIEFLKLI----KISFVAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YR++ ++ G IPIIALTATA P V+QDII L+ + +FK+S R
Sbjct: 151 WGHDFRPEYRKIRQVISGLGVGIPIIALTATATPKVQQDIIKNLQMSDA-TLFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----R 322
NLFY++ +D + +I+ GK GIIYC +R+ ++A++L +
Sbjct: 210 NLFYEI---RPKRDVIKEIIRYIKYNTGK------SGIIYCLSRKKVEEVAESLNLNGIK 260
Query: 323 KVNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ H R+ Q+ F+ ++ VI ATI+FGMGID+ +VRFV+H +P S+ YYQ
Sbjct: 261 ALPYHAGLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C ++++ L +K ++RE
Sbjct: 321 ETGRAGRDGGEGVCIAFYAQKDVDKLAKFMKDKPVSERE 359
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 201/387 (51%), Gaps = 47/387 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ ++ I L D+ V MPTG G + + I G +
Sbjct: 11 LKYHFGYDQFRPN--QRQIIEAALNNQDLLVIMPTGG----GKSLCFQLPALIKKGVTVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D T++ L ++ + E ++++
Sbjct: 65 -----------VSPLIA----LMQDQVTALADNGIGATFLNSTLNAKQVRERESLI---- 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLYV PER ++ SF L + Y LA + VDEAHCVS+WGHDFRP YR++
Sbjct: 106 -LQGKIKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIK 164
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
++RQ S+PI+ALTATA V++DII L + + S R NL+Y+V
Sbjct: 165 QVRQ-RFPSVPILALTATATQQVREDIIQQLGL-RDTSIHIASFNRPNLYYEV--QPKTS 220
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
SY + ++I+ G GI+YC +R+ +A+ L++ + ER
Sbjct: 221 KSYQQLYQYIKGQKG-------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRER 273
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S Q F+R ++ ++ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRDG +
Sbjct: 274 SNNQTRFIRDDVQIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAK 333
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C ++ S + +EY I T +Q
Sbjct: 334 CTLFFSFADARKIEYFINQKTEQNEQQ 360
>gi|319900082|ref|YP_004159810.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
gi|319415113|gb|ADV42224.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
Length = 727
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 206/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LTDQLKEYFGFDTFKG--NQEAIIQNLLDGNDTFVLMPTGGGKSLCYQLPSLLMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I +SD IVSG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVKSD------IVSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 TK------------------LLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-RVFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A+V I K + N + GIIYC +R+ +LA+ L+
Sbjct: 210 NLYYEV------RPKTANVDRDIIKFI--KNNSEKSGIIYCLSRKKVEELAEILQANGIN 261
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQ
Sbjct: 262 ARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 322 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|441498157|ref|ZP_20980358.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441438064|gb|ELR71407.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 728
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 209/392 (53%), Gaps = 55/392 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +KLK +FG++ F+ ++AI + +L + FV MPTGA G + + + G
Sbjct: 9 LKSKLKEVFGYNQFRG--NQEAIINNILNGRNTFVIMPTGA----GKSLCYQLPALVTDG 62
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ K + + + + S TK E +
Sbjct: 63 LAIV-----------ISPLIALM-------KNQVDQLNAFGVNAQFLNSTLTKAEMNRVK 104
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+E + IKLLYV PE E + L + N ++++ VDEAHC+SEWGHDFRP Y
Sbjct: 105 KET--LDGSIKLLYVAPESLTKEEN---IDFLKKAN-VSFVAVDEAHCISEWGHDFRPEY 158
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
RR+ E+ GN +PIIALTATA P V+ DI L VFK+S R+NLFY+V
Sbjct: 159 RRIKEIIGLLGN-LPIIALTATATPKVQLDIQKNLHMEGA-DVFKSSFNRTNLFYEV--- 213
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE------- 328
H K+ + + L +D+K + GI+YC +R+ ++A+ L VN +
Sbjct: 214 ----RQKKHAKKQLIQFL-RDHKGKS-GIVYCLSRKKVVEIAELLN--VNGFKAAPYHAG 265
Query: 329 -----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
R + Q+ F+ +++++ ATI+FGMGID+ +VRFVVH+ +P S+ YYQE+GR+GR
Sbjct: 266 LEPAVREKNQDDFLNEDVDIVVATIAFGMGIDKPDVRFVVHYDVPKSLEGYYQETGRSGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DGL+ C +++S + LE K +RE
Sbjct: 326 DGLEGKCLMFYSHNDINKLEKFNKDKPVQERE 357
>gi|393788520|ref|ZP_10376647.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392654200|gb|EIY47848.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 601
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 210/403 (52%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG++SF+ LQ++ IR++L R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYESFR-PLQEEIIRNLLNR-KDSLVLMPTGG----GKSICYQLPALLCEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVEALRANGIAAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +IKLLY++PE+ +TE + +L+R L+ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGKIKLLYISPEKLITE-----VDYLLRDMNLSLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q +PIIALTATA+ + DII L P K+F +S R NL V K
Sbjct: 154 ILHQMF-PKVPIIALTATADKITRGDIIRQLHLTDP-KIFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + EFI D A+ GIIYC +R T +A L++ ++ ++R
Sbjct: 212 EKSKAILEFI------DRHADESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSAYQR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DNTQDDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ +Q + + M +Y E
Sbjct: 326 TVLFYSLG-----DLILLTKFATESKQQTINLEKLQRMQQYAE 363
>gi|270295711|ref|ZP_06201911.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270273115|gb|EFA18977.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 727
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/399 (35%), Positives = 206/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LTDQLKKYFGFDTFKG--NQEAIIENLLAGNDTFVLMPTGGGKSLCYQLPSLLMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K++I RSD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKSAIDQVRSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T KLLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 T------------------KLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A+V I K + N GIIYC +R+ +LA+ L+
Sbjct: 210 NLYYEV------RPKTANVDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 261
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQ
Sbjct: 262 ARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 322 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|67475629|ref|XP_653505.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470462|gb|EAL48119.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|449702365|gb|EMD43019.1| ATP-dependent DNA helicase recQ, putative [Entamoeba histolytica
KU27]
Length = 509
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 184/367 (50%), Gaps = 50/367 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
EQ + L F SF+ Q++ I L+ D V MPTG + V++ R
Sbjct: 21 EQRIDETLHKCFNIQSFR--PQQREIILSTLQHKDTLVIMPTGGGKSLCFQLQPVLTERI 78
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N +G ++SF L S +K
Sbjct: 79 TIVISPLIALMQN----QVDGLNKRGITSFILN----------------------STLSK 112
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+E +L L P + LLYVTPE+ T+ F +++ L KL VDEAHC+S+WG
Sbjct: 113 SEATKVLSILNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSIKKLGMFAVDEAHCISQWG 172
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP+Y L L++ T IPIIALTATA VK+DII L+ P ++F +S R N+
Sbjct: 173 HDFRPSYLELSYLKK-TYPDIPIIALTATATSKVKEDIIKSLELKNP-QIFTSSFDRPNI 230
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
++ VI+ DL Y + + + L + K GIIYC TR + +
Sbjct: 231 YFKVIYKDL----YETPIQILTQILHQHEKEG--GIIYCSTRMECELIEKYISTNGYPVA 284
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ ER +Q+ + GE+NV+ ATI+FGMGIDR +VRFV+HW +P +I + QE+
Sbjct: 285 KYHAGMKSEERETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEA 344
Query: 379 GRAGRDG 385
GRAGRDG
Sbjct: 345 GRAGRDG 351
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 154/442 (34%), Positives = 227/442 (51%), Gaps = 57/442 (12%)
Query: 14 GKSSSLTGNQQDRKGGKVSEQELTAK-----LKALFGFDSFKCELQKKAIRHILLRTHDI 68
G S G Q+ + + Q +K LK F F+ Q +AI L D
Sbjct: 673 GNISRFAGTQKSQTHNPLWNQHPWSKDVKRVLKDKFHLRGFRMN-QLEAI-DATLSGKDT 730
Query: 69 FVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKT 127
FV MPTG SL + S + G+ R +SP+LS D+
Sbjct: 731 FVLMPTGGGKSLCYQLPS------------VVTTGSTRGVTIVVSPLLS-----LMQDQV 773
Query: 128 SIVTGRSDLYQLELIVSGQTKTENKA-ILEELR--LVKPRIKLLYVTPERAVTESFHYLL 184
S + + +++G+TK + + I++ L + + RI+LLY+TPE + L+
Sbjct: 774 SHLKA---INIKAFLLNGETKRDERTWIMQTLSGPVAEERIELLYITPE--MINKSQALI 828
Query: 185 QHLVRYNK---LAYIVVDEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEP 240
Q L + NK LA IV+DEAHCVS+WGHDFRP Y+ LGE+R + G +P+IALTATA
Sbjct: 829 QSLEKLNKRHRLARIVIDEAHCVSQWGHDFRPDYKELGEIRNRLPG--VPMIALTATATE 886
Query: 241 SVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKAN 300
+VK D I LK ++F S R NL Y+V K + V + I + K + N
Sbjct: 887 NVKVDTIHNLKMEG-CEIFTQSFNRPNLTYEV----RQKGKSSEVMDSIANTI-KTSYPN 940
Query: 301 NCGIIYCRTREHTTDLADALRRK-----------VNKHERSRVQESFMRGEINVITATIS 349
GI+YC +R+ +A+ L K V +R+ VQE + G ++VI ATI+
Sbjct: 941 KSGIVYCLSRKACESVAEILASKYKIKADFYHAGVASAKRAEVQERWQTGRVHVIVATIA 1000
Query: 350 FGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTD 409
FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG +S C +Y+S SL+ +I
Sbjct: 1001 FGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDYTSLQSMIDKG 1060
Query: 410 TSTKREQLELKFKNYLSMLEYC 431
+ EQ + + ++++YC
Sbjct: 1061 EGSN-EQKTRQRQMLRNVMQYC 1081
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 207/395 (52%), Gaps = 54/395 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ L ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LETTLKYYFGYDNFR--LGQREIIEEALQNKDLMVVMPTGG----GKSLCFQLPALMKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENKA 153
+ +SP+++ D+ + G + + + S Q ++ +A
Sbjct: 61 VTIV-----------VSPLIA-----LMQDQVETLRKNGIAATFLNSSLNSYQVRSREQA 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
ILE ++KL+YV PER V+E F L + +A +DEAHCVSEWGHDFRP
Sbjct: 105 ILE------GKVKLVYVAPERLVSERFLPFLDLVNHQVGIAGFAIDEAHCVSEWGHDFRP 158
Query: 214 TYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
YR+L LRQ ++G IP+ ALTATA V+ DII L +P + S R NL+Y+V
Sbjct: 159 EYRQLITLRQRYSG--IPLFALTATATDRVRADIIEQLGLQEP-SIHIASFNRQNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL----------ADALRR 322
K YA V E I ++++A+ IIYC TR+ +L A A
Sbjct: 216 --RPKTKTVYAEVLELI-----RESEAST--IIYCLTRKQVDELTFKLQHDKISALAYHA 266
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ER+ Q F+R ++ V+ AT++FGMGID+ +VR V+H+ +P +I YYQESGRAG
Sbjct: 267 GLSDEERTNNQTRFIRDDVRVMVATVAFGMGIDKPDVRLVIHYNLPRNIEGYYQESGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
RDG S C ++ K++E+ I T ++ EQL
Sbjct: 327 RDGEPSRCTMFFGVGDIKTIEWSINQKTDSQ-EQL 360
>gi|153208866|ref|ZP_01947088.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii 'MSU Goat Q177']
gi|212218922|ref|YP_002305709.1| ATP-dependent DNA helicase [Coxiella burnetii CbuK_Q154]
gi|120575655|gb|EAX32279.1| ATP-dependent DNA helicase RecQ [Coxiella burnetii 'MSU Goat Q177']
gi|212013184|gb|ACJ20564.1| ATP-dependent DNA helicase [Coxiella burnetii CbuK_Q154]
Length = 601
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 205/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG G + + + G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGG----GKSLCYQIPALVREGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE +A R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAEARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P IALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFIALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIRYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
Y + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KPYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADGYSALPYHAGLPAVQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|149372419|ref|ZP_01891607.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149354809|gb|EDM43372.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 730
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 200/379 (52%), Gaps = 46/379 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L A LK FGF FK LQ+ I+ IL R + FV MPTG G + + +
Sbjct: 5 DLYAALKQYFGFSKFKG-LQEVVIQSILNR-ENTFVIMPTGG----GKSLCYQLPALMNE 58
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ ++ + D ++ SD ++ S KTE K +
Sbjct: 59 GTAIV-----------VSPLIA--LMKNQVDALRAIS--SDEGIAHVLNSSLNKTEVKQV 103
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ KLLYV PE + + LQ+ ++++ +DEAHC+SEWGHDFRP
Sbjct: 104 KSDIE--SGITKLLYVAPESLTKDEYVDFLQN----QTISFLAIDEAHCISEWGHDFRPE 157
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L + + G +IPII LTATA V++DI+ L FK S R NL+Y+V
Sbjct: 158 YRNLKSIIERIGENIPIIGLTATATEKVQEDILKNLAMTSA-NTFKASFNRPNLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE-- 328
K+ + + F+++ GK GIIYC +R+ +LA L+ + V H
Sbjct: 215 RSKTKNIDSDITRFVKQNEGK------SGIIYCLSRKRVEELAQILQVNGIKAVPYHAGL 268
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R R Q+ F+ E +V+ ATI+FGMGID+ +VRFV+H MP SI +YYQE+GRAGRD
Sbjct: 269 DAKTRVRHQDMFLMEECDVVVATIAFGMGIDKPDVRFVIHNDMPKSIESYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + +C Y+S + LE
Sbjct: 329 GGEGHCLAYYSYKDIEKLE 347
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 219/425 (51%), Gaps = 61/425 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L A K +FG SF+ ++ + + + +D+FV MPTG G ++ + I
Sbjct: 413 KKLEANNKKVFGNHSFR--PNQREVINATMSGYDVFVLMPTGG----GKSLTYQLPALIS 466
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ L + E +
Sbjct: 467 PGITLV-----------ISPLVS----LIQDQIMHLLQANIPAAYLS---ASMEWNEQQE 508
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL EL K KLLY TPE+ A ++ L +L L+ IV+DEAHCVS+WGHDFR
Sbjct: 509 ILRELSSCK--YKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFR 566
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ LG L+Q N+ P++ALTATA SVK+D++ L +F+ S R NL+Y V
Sbjct: 567 PDYQGLGILKQKFPNT-PVLALTATATASVKEDVVQALGLVNCI-IFRQSFNRPNLWYSV 624
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------- 322
+ + + +FI ++N + CGIIYC +R +A+ L+
Sbjct: 625 L--PKTRKCLDDIDKFI-----RENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHG 677
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRAG
Sbjct: 678 SMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG 737
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI---------------KTDTSTKREQLELKFKNYLSM 427
RDG +S C +Y+S ++++I +++ ++ LE +N L M
Sbjct: 738 RDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRM 797
Query: 428 LEYCE 432
+ YCE
Sbjct: 798 VSYCE 802
>gi|150003035|ref|YP_001297779.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212690531|ref|ZP_03298659.1| hypothetical protein BACDOR_00013 [Bacteroides dorei DSM 17855]
gi|237708012|ref|ZP_04538493.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|265754201|ref|ZP_06089390.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294775659|ref|ZP_06741167.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|319642190|ref|ZP_07996850.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|345515920|ref|ZP_08795417.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|345518199|ref|ZP_08797654.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|423229918|ref|ZP_17216323.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423241571|ref|ZP_17222683.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|423247008|ref|ZP_17228059.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|423314860|ref|ZP_17292792.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149931459|gb|ABR38157.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212666880|gb|EEB27452.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229436550|gb|EEO46627.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|229457998|gb|EEO63719.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|254836466|gb|EET16775.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|263234910|gb|EEZ20465.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294450503|gb|EFG18995.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|317386176|gb|EFV67095.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|392632709|gb|EIY26667.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|392633769|gb|EIY27707.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392641157|gb|EIY34942.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392681042|gb|EIY74404.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 726
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 206/405 (50%), Gaps = 77/405 (19%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 7 LTDALKKYFGFDTFKG--NQEAIIRNLLAGNDTFVLMPTGGGKSLCYQLPSLIMDGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K++I +SD I+SG+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKSAIDQVKSD------ILSGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T KLLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 113 T------------------KLLYVAPESLTKEENVDFLKGV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L + FK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVRMDIQKNLGMQDAQE-FKSSFNRP 208
Query: 267 NLFYDV------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
NL+Y+V I D++K FI+ GK GIIYC +R+ +LA+ L
Sbjct: 209 NLYYEVRSKTNNIDRDIIK--------FIKANPGK------SGIIYCLSRKKVEELAEVL 254
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ ++ R+ Q+ F++ +I+VI ATI+FGMGID+ +VRFV+H+ +P S
Sbjct: 255 QANGINARAYHAGMDSATRTANQDGFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKS 314
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ YYQE+GRAGRDG + C ++S + LE ++ ++E
Sbjct: 315 LEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVAEQE 359
>gi|373501519|ref|ZP_09591870.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
gi|371948172|gb|EHO66059.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
Length = 727
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 143/397 (36%), Positives = 201/397 (50%), Gaps = 59/397 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT LK FGFD FK E Q AI LL ++ FV MPTG + S++ + +
Sbjct: 7 LTEYLKRYFGFDKFKGEQQ--AIIQNLLDGNNTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
+ P + N V NG + YL K I ++D I SG+TK
Sbjct: 65 VSPLIALMKN-QVDVINGISEEDGLAHYLNSSLKKLEIDRVKAD------ISSGKTK--- 114
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
LLYV PE E L+ + K+++ +DEAHC+SEWGHDF
Sbjct: 115 ---------------LLYVAPESLTKEENVEFLKTV----KISFYAIDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSI---PIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
RP YRR+ +F + I PIIALTATA V+ DII L + K FK+S R NL
Sbjct: 156 RPEYRRI----RFAIDEICKAPIIALTATATDKVRTDIIKSLCIDD-CKEFKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V +D+ + FI + GK GIIYC +R +LA L+
Sbjct: 211 YYEVRPKRSDEDTNRQLIRFIRQHAGK------SGIIYCLSRRKVEELAAVLQANDIKAA 264
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ EI+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 265 PYHAGLDSETRSKTQDGFLMEEIDVIVATIAFGMGIDKPDVRFVIHYNIPKSLEGYYQET 324
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRAGRDG + C ++S+ K L+ ++ ++E
Sbjct: 325 GRAGRDGEEGICITFYSQKDLKKLDKFMEGKPVAEQE 361
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 216/412 (52%), Gaps = 47/412 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 692 LKERFHLRGFRPN-QLEAIDSTL-SGKDTFVLMPTGGGKSLCYQLPS------------V 737
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA-ILEE 157
I +G+ R ISP+LS +D + + + Y +++G T +E + I+
Sbjct: 738 ISSGSTRGVTLVISPLLS----LMQDQVSHLRQNKIKAY----LINGDTPSEERQWIMST 789
Query: 158 LRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L P I+LLY+TPE + + + ++ L KLA +V+DEAHCVS+WGHDFRP
Sbjct: 790 LSSHNPETHIELLYITPEMISKSHALTDRIEKLCSIQKLARVVIDEAHCVSQWGHDFRPD 849
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y+++G R + G +P++ALTATA +VK D+I L+ +VF S R NL Y+V
Sbjct: 850 YKQIGAFRARIPG--VPLMALTATATENVKVDVIHNLRMQG-CEVFTQSFNRPNLTYEV- 905
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K +A + + I + K N CGI+YC +R +A+ALR
Sbjct: 906 ---RRKGKHAELLDSIADTI-KSTYRNKCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHA 961
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R+R Q+ + G+++VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAG
Sbjct: 962 GLDAETRARTQQRWQAGDVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1021
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
RDG +S C +Y S +++ +I+ + + Q + + +++YCE
Sbjct: 1022 RDGRRSGCYLYFSHRDVSTMQSMIEKNEDSDDVQKGRQTRMLNDVVKYCENA 1073
>gi|329957341|ref|ZP_08297861.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328523054|gb|EGF50157.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 727
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 209/392 (53%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI LL +D FV MPTG +S P
Sbjct: 8 LTDQLKNYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGG---------GKSLCYQLPS 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+++G ISP+++ + V + + + I + NK+ +
Sbjct: 57 --LLMDGTAI----VISPLIALM--------KNQVDAMRNFSEEDGIAHFINSSLNKSAI 102
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 103 DQVKSDILAGRTKLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + G + P+IALTATA P V+ DI L + +VFK+S R NL+Y+V
Sbjct: 159 EYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVEA-QVFKSSFNRPNLYYEV- 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ A+V + I K + N GIIYC +R+ +LA+ L+
Sbjct: 216 -----RPKTANVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGR
Sbjct: 269 MDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C +++ + LE ++ ++E
Sbjct: 329 DGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|407040860|gb|EKE40365.1| recQ family DNA helicase [Entamoeba nuttalli P19]
Length = 508
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 186/367 (50%), Gaps = 50/367 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARS 88
EQ + L F SF+ Q++ I L+ D V MPTG SL + V++ R
Sbjct: 21 EQRIDDTLHKCFNIQSFR--PQQREIILSTLQHKDTLVIMPTGGGKSLCFQLQPVLTERI 78
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ I P + N +G ++SF L S +K
Sbjct: 79 TIVISPLIALMQN----QVDGLNKRGITSFILN----------------------STLSK 112
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+E +L L P + LLYVTPE+ T+ F +++ L KL VDEAHC+S+WG
Sbjct: 113 SEATKVLSILNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSVKKLGMFAVDEAHCISQWG 172
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP+Y L L++ T IPIIALTATA VK+DII L+ P ++F +S R N+
Sbjct: 173 HDFRPSYLELSYLKK-TYPDIPIIALTATATSKVKEDIIKSLELKNP-QIFTSSFDRPNI 230
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
++ VI+ DL Y + + + L + K GIIYC TR + +
Sbjct: 231 YFKVIYKDL----YETPIQILTQILHQHEKEG--GIIYCSTRMECELIEKYISTNGYPVA 284
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ ER +Q+ + GE+NV+ ATI+FGMGIDR +VRFV+HW +P +I + QE+
Sbjct: 285 KYHAGMKSEERETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEA 344
Query: 379 GRAGRDG 385
GRAGRDG
Sbjct: 345 GRAGRDG 351
>gi|167765436|ref|ZP_02437549.1| hypothetical protein BACSTE_03826 [Bacteroides stercoris ATCC
43183]
gi|167697064|gb|EDS13643.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 727
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 209/392 (53%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI LL +D FV MPTG +S P
Sbjct: 8 LTDQLKNYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGG---------GKSLCYQLPS 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+++G ISP+++ + V + + + I + NK+ +
Sbjct: 57 --LLMDGTAI----VISPLIALM--------KNQVDAMRNFSEEDGIAHFINSSLNKSAI 102
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 103 DQVKSDILAGRTKLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + G + P+IALTATA P V+ DI L + +VFK+S R NL+Y+V
Sbjct: 159 EYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVEA-QVFKSSFNRPNLYYEV- 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ A+V + I K + N GIIYC +R+ +LA+ L+
Sbjct: 216 -----RPKTANVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGR
Sbjct: 269 MDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C +++ + LE ++ ++E
Sbjct: 329 DGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 195/378 (51%), Gaps = 45/378 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+++F+ + I + L D+ +PTG G + + + PG +
Sbjct: 7 LKHYFGYEAFRP--GQAEIINASLNQQDVLAILPTGG----GKSICFQLPALLKPGVTLV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ ++ + + + S E +A + +
Sbjct: 61 -----------VSPLIALML-------DQVLALQKNGIPATFLNSTLAAAEARARIHSI- 101
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +KLLYV PER V++SF LL ++ + +A VVDEAHCVSEWGHDFRP YR+L
Sbjct: 102 -LNGEVKLLYVAPERLVSDSFTALLANIHQTVGIASFVVDEAHCVSEWGHDFRPDYRQLS 160
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ SIP++ALTATA V+ DI L +P+ + S R NL+Y+VI K
Sbjct: 161 RLRELF-PSIPMMALTATATHCVRADITEQLSLKQPF-IHVASFNRPNLYYEVIEKSRGK 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
S + + +I+K G GIIYC +R++ LA L +N R
Sbjct: 219 VSLSELTRYIKKTEGS-------GIIYCMSRKNVEKLASELNENGISALPYHAGLNNDTR 271
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ Q F+R ++ ++ AT++FGMGI++ +VRFV+H+ +P +I YYQESGR GRDG +
Sbjct: 272 TDHQTRFIRDDVQIMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRGGRDGEPAR 331
Query: 390 CRIYHSEHSKKSLEYVIK 407
C ++ S K ++ I+
Sbjct: 332 CTLFFSPGDIKQADWFIQ 349
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 217/427 (50%), Gaps = 63/427 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 770 KELEVNNKKVFGNHSFR--PNQREIINASMSGCDVFVLMPTGG----GKSLTYQLPALIH 823
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ L + TE +
Sbjct: 824 PGITLV-----------ISPLVS----LIQDQIMHLLQANIPAAYLS---ANMEWTEQQD 865
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCVSEWGHD 210
IL EL + KLLYVTPE+ LL+HL + LA IV+DEAHCVS+WGHD
Sbjct: 866 ILRELNSDYCKYKLLYVTPEKVARSD--NLLRHLDNLHFRELLARIVIDEAHCVSQWGHD 923
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q N+ P++ALTATA SVK+D++ L +F+ S R NL Y
Sbjct: 924 FRPDYQGLGILKQKFPNT-PVLALTATATASVKEDVVQALGLVNCI-IFRQSFNRPNLRY 981
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
VI K + +FI ++N + CGI+YC +R +A+ L+
Sbjct: 982 SVI--PKTKKCLEDIDKFI-----RENHFDECGIVYCLSRMDCEKVAEKLQECGHKCAFY 1034
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 1035 HGSMDPVQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 1094
Query: 381 AGRDGLQSYCRIYHS-------EH--SKKSLEYVIKTDTSTKREQ------LELKFKNYL 425
AGRDG S C +Y++ +H S+ ++E T + LE +N +
Sbjct: 1095 AGRDGQHSSCVLYYTYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLV 1154
Query: 426 SMLEYCE 432
M+ YCE
Sbjct: 1155 RMVSYCE 1161
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 210/417 (50%), Gaps = 58/417 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-----VSLVGSVVSARS 88
+E+ + +FG F+ Q +AI LL + D F+ MPTG L GS+ +
Sbjct: 452 KEMLKVFRQIFGLHKFRTN-QLEAINAALL-SKDCFILMPTGGGKSLCYQLPGSISKGLT 509
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
V P + ++ V+ L RD ++ ++G + ++ELI
Sbjct: 510 LVVSPLKS--LIQDQVQK-------------LCLRDVPSAHLSGDASPNEVELI------ 548
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
EL P++KLLYVTPE+ + S L++L L+ V+DEAHCVS+W
Sbjct: 549 ------YRELSRRDPQLKLLYVTPEKISSSSKLVSTLENLYSRGMLSRFVIDEAHCVSQW 602
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP Y+RL +LR+ ++PI+ALTATA P V+ DI+ LK P F S RSN
Sbjct: 603 GHDFRPDYKRLNKLRELFP-TVPIMALTATATPRVRADIVKQLKIRSPI-WFIQSFNRSN 660
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK-- 323
L Y + K + C+ + A GIIYC +R +A L
Sbjct: 661 LKYSIYPKKPSK--------VTQDCINLIQARFAGESGIIYCLSRNECEKVAAELSSAGI 712
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ + R+ Q++++R E V+ ATI+FGMGID+ +VRFV+H +P SI +Y
Sbjct: 713 SAKAYHAGLESNSRTYTQQAWVRDEYKVVCATIAFGMGIDKPDVRFVIHHSLPKSIEGFY 772
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QESGRAGRDG ++C +++S L V++ + E + + +N M++YCE
Sbjct: 773 QESGRAGRDGNIAHCILFYSYQDMTRLRKVMERENDN-FEAIRVHIENLQRMVQYCE 828
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 213/409 (52%), Gaps = 46/409 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
L+ F F+ Q +AI + L D+FV MPTG SL + S
Sbjct: 685 LRHRFNLPGFRPN-QLEAI-NATLSGKDVFVLMPTGGGKSLCYQLPS------------V 730
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL 158
I +G + ISP+LS +D+ + + R Q ++ +K E I L
Sbjct: 731 IQSGKTKGVTVVISPLLS-----LMEDQVAHL--RDLKIQASVLNGDASKEEKMEIYGAL 783
Query: 159 RL--VKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
R V+ I+LLYVTPE + +L HL KLA IV+DEAHCVS+WGHDFRP Y
Sbjct: 784 RNANVEKLIQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDY 843
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
+ LG R +F G IP++ALTATA +VK D+I L + +VF S R NL Y+V
Sbjct: 844 KELGNTRTKFPG--IPLMALTATATENVKVDVIHNLGMHD-AEVFVQSFNRPNLIYEVRR 900
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-----RKVNKH-- 327
+ A + E I K + + GIIYC +R+ +A+ LR + V+ H
Sbjct: 901 KPKGTNVVASIAETI-----KGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAG 955
Query: 328 ----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+R +Q + RG+ NVI ATI+FGMGID+ +VRFV+H MP S+ YYQE+GRAGR
Sbjct: 956 LPSNDRISIQRDWQRGKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGR 1015
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG +S C +Y+ S+ ++I + EQ + + ++++CE
Sbjct: 1016 DGERSGCYLYYGFQDTASIRHMIDKGEGSS-EQKSRQHRMLRHVVQFCE 1063
>gi|223558023|gb|ACM91029.1| ATP-dependent DNA helicase RecQ [uncultured bacterium URE4]
Length = 731
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/400 (35%), Positives = 206/400 (51%), Gaps = 67/400 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTG----------AVSLVGSVVS 85
L +KLK FGFD+FK + Q++ IRH L+ + FV MPTG A+ + G+ +
Sbjct: 8 LQSKLKHFFGFDAFKGD-QERIIRH-LVDGGNAFVLMPTGGGKSLCYQLPALVMEGTAIV 65
Query: 86 ARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG 145
+ + + G V S +G I+ L+S R T + R DL +SG
Sbjct: 66 ISPLIALMKNQVDAIRGFVESGDG-IAHFLNSSLSR-----TQVAEVREDL------LSG 113
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
TK LLYV PE E LL+ + +++ VDEAHC+S
Sbjct: 114 VTK------------------LLYVAPESLTKEENIALLKEI----HISFYAVDEAHCIS 151
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
EWGHDFRP YR++ + + P+IALTATA P V+ DI+ L+ + VFK+S R
Sbjct: 152 EWGHDFRPEYRKIRSIIEDI-QPAPVIALTATATPKVQSDILKNLRISDA-TVFKSSFNR 209
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----- 320
NL+Y+V D + D+ + FI + GK GIIYC +R+ +LA L
Sbjct: 210 PNLYYEV-RDKV--DTEKDIIRFIRQNPGK------SGIIYCLSRKKVEELAQLLSINGI 260
Query: 321 -----RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R+ Q+ F+ +I VI ATI+FGMGID+ +VRFV+H+ +P SI YY
Sbjct: 261 QALPYHAGLDAKTRAENQDRFLMEDIQVIVATIAFGMGIDKPDVRFVIHYDIPKSIEGYY 320
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
QE+GRAGRDG + C Y+S + LE ++ ++E
Sbjct: 321 QETGRAGRDGQEGLCITYYSYKDIQKLEKFMQGKPVAEQE 360
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 213/409 (52%), Gaps = 46/409 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
L+ F F+ Q +AI + L D+FV MPTG SL + S
Sbjct: 685 LRHRFNLPGFRPN-QLEAI-NATLSGKDVFVLMPTGGGKSLCYQLPS------------V 730
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL 158
I +G + ISP+LS +D+ + + R Q ++ +K E I L
Sbjct: 731 IQSGKTKGVTVVISPLLS-----LMEDQVAHL--RDLKIQASVLNGDASKEEKMEIYGAL 783
Query: 159 RL--VKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
R V+ I+LLYVTPE + +L HL KLA IV+DEAHCVS+WGHDFRP Y
Sbjct: 784 RNANVEKLIQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDY 843
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
+ LG R +F G IP++ALTATA +VK D+I L + +VF S R NL Y+V
Sbjct: 844 KELGNTRTKFPG--IPLMALTATATENVKVDVIHNLGMHD-AEVFVQSFNRPNLIYEVRR 900
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-----RKVNKH-- 327
+ A + E I K + + GIIYC +R+ +A+ LR + V+ H
Sbjct: 901 KPKGTNVVASIAETI-----KGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAG 955
Query: 328 ----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+R +Q + RG+ NVI ATI+FGMGID+ +VRFV+H MP S+ YYQE+GRAGR
Sbjct: 956 LPSNDRISIQRDWQRGKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGR 1015
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG +S C +Y+ S+ ++I + EQ + + ++++CE
Sbjct: 1016 DGERSGCYLYYGFQDTASIRHMIDKGEGSS-EQKSRQHRMLRHVVQFCE 1063
>gi|91791699|ref|YP_561350.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
gi|91713701|gb|ABE53627.1| ATP-dependent DNA helicase RecQ [Shewanella denitrificans OS217]
Length = 613
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 223/412 (54%), Gaps = 56/412 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
SE EL+A+L+ +FG+ SF+ E Q++ + L D V MPTG G + +
Sbjct: 15 SEDELSARLQQVFGYRSFR-EGQREVMERTLA-GEDTLVIMPTGG----GKSICYQLPAL 68
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTE 150
+ G + +SP++S +D S++ TG Y + S Q +
Sbjct: 69 LFQGLTIV-----------VSPLIS----LMKDQVDSLIQTGVPAAY----LNSSQPREV 109
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ +L +L IKLLYV+PER + E F LQHL ++ VDEAHC+S+WGHD
Sbjct: 110 SMNVLRQLH--SGEIKLLYVSPERLLREDFIERLQHL----HVSLFAVDEAHCISQWGHD 163
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y LG L+Q + +P++ALTATA+ + ++ I L +P+ + +S R N+ Y
Sbjct: 164 FRPEYAELGRLKQLFPH-VPLMALTATADQATRKSICERLNI-EPFCLL-SSFDRPNIRY 220
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
V + L ++ + +K+FI +++ N GIIYC +R ++A+ LR +
Sbjct: 221 TVA-EKL--NAASQLKQFIA------SQSGNSGIIYCSSRRRVDEVAERLRLQGLKAEAY 271
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ ER VQ+ F++ +++++ AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GR
Sbjct: 272 HAGRSQEERGDVQDKFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKSVEAYYQETGR 331
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDGL + + + ++I+ ++Q+E F +M + E
Sbjct: 332 AGRDGLDAEAYMLFDPADIGRVRHLIEQSEPGPQQQVE--FHKLHTMAAFAE 381
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 206/403 (51%), Gaps = 43/403 (10%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNG 102
FG F+ QK+AI + D+FV MPTG SLV + + + P G +
Sbjct: 778 FGNQGFRAN-QKEAINAAMC-GRDVFVLMPTGGGKSLVYQLAAT---LTGPAGCGVTV-- 830
Query: 103 NVRSRNGWISPILSSFYLR-FRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLV 161
+SP+ S + R I G + ++TE++ ++ +LR +
Sbjct: 831 -------VVSPLKSLIMDQVMRLQALRIPCG--------ALCGATSETESRELMRDLRSL 875
Query: 162 KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
P+ ++LYVTPE+ +++E+F +L L LA V+DEAHCVS+WGHDFRP Y+RL
Sbjct: 876 HPKTRILYVTPEKISLSEAFRSILDWLASRKLLARFVIDEAHCVSQWGHDFRPDYKRLSL 935
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
+Q S+P++ALTATA V++D+ L + FK S R N+ Y+V
Sbjct: 936 CKQRY-PSVPLMALTATATREVREDVKVQLGIPR-CVTFKQSFNRPNISYEVYLKGPRSK 993
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHER 329
+ + EFI+ + + GIIYC +++ D+A ALRR+ + R
Sbjct: 994 TVEWIAEFIQNEMPR----GASGIIYCFSKQECEDVAKALRRQFRIAAEHYHAGLTDESR 1049
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ+ +MR VI ATI+FGMGID+ +VRFV+H+ MP ++ +YQESGRAGRDG +
Sbjct: 1050 IAVQQRWMRRATQVIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQESGRAGRDGQPAR 1109
Query: 390 CRIYHSEHSKKSLEYVI-KTDTSTKREQLELKFKNYLSMLEYC 431
+ S ++ L +I K R L L+ M +C
Sbjct: 1110 SIVLFSHADQRRLIGMIDKNSNGLTRAALSLQKDAVKRMAAWC 1152
>gi|429724940|ref|ZP_19259801.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
gi|429151402|gb|EKX94270.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
Length = 728
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 204/382 (53%), Gaps = 47/382 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
++ L LK FGF++F+ ++AI L+ HD+FV MPTG + + A
Sbjct: 3 NDTNLLEPLKLYFGFETFRN--NQEAIIRSLMAGHDVFVLMPTGGGKSICYQLPA----- 55
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
++ G ++ ++S ++ ++ R+D I + TK E
Sbjct: 56 ------LLMEG--------VAIVVSPLIALMKNQVDAVRQTRADNSVAHYIYAALTKHEI 101
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
I+ ++ K KLLYV+PE +SF L+ + ++++I VDEAHC+SEWGHDF
Sbjct: 102 LDIMNDVTTGK--TKLLYVSPELFNKDSFVDFLKTV----RVSFIAVDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR+L + G +PIIALTATA V+ DI L + + FK+S R NL+Y+
Sbjct: 156 RPEYRKLRPIINEIG-QVPIIALTATATDKVRMDIKKNLGIPEALE-FKSSFNRPNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K Y ++ FI+ N + GIIYC +R+ +L + LR
Sbjct: 214 V-RQKTAKVDYDVIR-FIK------NHPHVSGIIYCLSRKRVEELTEVLRTNDINACAYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS Q++F++ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGLDAQVRSNTQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C ++S + LE
Sbjct: 326 GRDGGEGLCIAFYSHKDLQKLE 347
>gi|317504966|ref|ZP_07962914.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
gi|315663848|gb|EFV03567.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
Length = 725
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 199/379 (52%), Gaps = 49/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGFD FK + ++AI L+ HD FV MPTG G + + I G
Sbjct: 7 LLQQLKHYFGFDKFKGD--QEAIILSLMEGHDTFVLMPTGG----GKSLCYQLPSLIMEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRS-DLYQLELIVSGQTKTENKAI 154
+ ISP+++ ++ ++ G S D + S K+ + +
Sbjct: 61 TAIV-----------ISPLIA-----LMKNQVDVINGMSEDGTVAHYLNSSLNKSAIQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ +R + KLLYV PE E + L+ + +++ +DEAHC+SEWGHDFRP
Sbjct: 105 MDNVR--SGKTKLLYVAPESLNKEEYVEFLKSI----HISFYAIDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR + GN+ P+IALTATA V+ DI L ++ FK+S R+NL+Y+V
Sbjct: 159 YRNIRPTINKIGNA-PVIALTATATDKVRTDIKKSLGIMDAHE-FKSSFNRANLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
D + +FI + GK GIIYC +R+ +LA+ L+ +
Sbjct: 215 RPKTNDVDKQIIKFIRQHEGK------SGIIYCLSRKKVEELAEVLKANNIKAAPYHAGL 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRD
Sbjct: 269 DSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++++ K LE
Sbjct: 329 GGEGLCIAFYAQKDLKKLE 347
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 219/425 (51%), Gaps = 61/425 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
++L A K +FG SF+ ++ + + + +D+FV MPTG G ++ + I
Sbjct: 424 KKLEANNKKVFGNHSFR--PNQREVINATMSGYDVFVLMPTGG----GKSLTYQLPALIS 477
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ L + E +
Sbjct: 478 PGITLV-----------ISPLVS----LIQDQIMHLLQANIPAAYLS---ASMEWNEQQE 519
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL EL K KLLY TPE+ A ++ L +L L+ IV+DEAHCVS+WGHDFR
Sbjct: 520 ILRELSSCK--YKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGHDFR 577
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ LG L+Q N+ P++ALTATA SVK+D++ L +F+ S R NL+Y V
Sbjct: 578 PDYQGLGILKQKFPNT-PVLALTATATASVKEDVVQALGLVNCI-IFRQSFNRPNLWYSV 635
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------- 322
+ + + +FI ++N + CGIIYC +R +A+ L+
Sbjct: 636 L--PKTRKCLDDIDKFI-----RENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHG 688
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GRAG
Sbjct: 689 SMDPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAG 748
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI---------------KTDTSTKREQLELKFKNYLSM 427
RDG +S C +Y+S ++++I +++ ++ LE +N L M
Sbjct: 749 RDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRM 808
Query: 428 LEYCE 432
+ YCE
Sbjct: 809 VSYCE 813
>gi|421766700|ref|ZP_16203469.1| ATP-dependent DNA helicase RecQ [Lactococcus garvieae DCC43]
gi|407624726|gb|EKF51459.1| ATP-dependent DNA helicase RecQ [Lactococcus garvieae DCC43]
Length = 594
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 214/416 (51%), Gaps = 54/416 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L KLK +FG+++F+ + QK+ I +L T D +PTGA G + + + G
Sbjct: 3 LEEKLKEIFGYENFR-QGQKQIIEQVLKGT-DTLGILPTGA----GKSICYQLPALLQEG 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP++S ++ + D+ +I + T + +
Sbjct: 57 VTLV-----------VSPLIS--LMKDQVDQLNIAN-------IPATFINSTVDDQETRF 96
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ +K+L+V PER ESF+Y LQHL + + +DEAHC+S+WGHDFRP+Y
Sbjct: 97 RMAQVESGEVKILFVAPERFELESFNYFLQHL----PIDLVAIDEAHCISQWGHDFRPSY 152
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
E + I+ALTATA P V +DI +L+ + P KT R NL ++V+
Sbjct: 153 VTFAERLADLPTAPTILALTATATPRVAKDIQDLLRIS-PENTVKTGFLRENLRFEVVKG 211
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
KD +K +++K + GIIY TR+ ++ + L R ++
Sbjct: 212 ---KDKRDFLKSYLKK------HPDESGIIYANTRKEVEEVTEWLNRNHFPAKRYHAGLS 262
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+ ER QE F+ ++ ++ AT +FGMGI++ NVRFV+H+GMP++I YYQE+GRAGRDG
Sbjct: 263 ERERQNNQEDFLYDDVQIMVATNAFGMGINKSNVRFVIHYGMPATIEGYYQEAGRAGRDG 322
Query: 386 LQSYCRIYHSEHSKKSLEYVIK----TDTSTKREQLELKFKNYLSMLEYCEQGYFL 437
L S + S + + ++I+ +D+ ++E +L+ + E C QGY L
Sbjct: 323 LDSDAILLFSPNDVRLRNFLIEQGEGSDSHKEQEYEKLRQMQAYTSSETCLQGYIL 378
>gi|419839751|ref|ZP_14363154.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
gi|386909096|gb|EIJ73776.1| ATP-dependent DNA helicase RecQ [Haemophilus haemolyticus HK386]
Length = 619
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 210/392 (53%), Gaps = 57/392 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGW---ISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
+G ISP++S ++ + D+ +D + Q + +NK
Sbjct: 68 --------DGLTLVISPLIS--LMKDQVDQLQANGIEADFLNSSQTLEQQQRVQNK---- 113
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y
Sbjct: 114 ---LISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYT 166
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+LG L+ ++ PI+ALTATA+ + +QDI++ L P++ + S R N+ Y
Sbjct: 167 QLGGLKASFPHA-PIMALTATADYATRQDILTHLNLENPHR-YIGSFDRPNIRYT----- 219
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
L++ Y +++ I L + K+ GIIYC +R +A++LR K +
Sbjct: 220 -LEEKYKPMEQLIRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMET 275
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L
Sbjct: 276 AFRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDL 335
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ +++ L+ ++ T + Q+E
Sbjct: 336 PAEAVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|332664724|ref|YP_004447512.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332333538|gb|AEE50639.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 732
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/401 (33%), Positives = 205/401 (51%), Gaps = 56/401 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
V+++ L L+ FGFD+FK ++AI LL D FV MPTG +S
Sbjct: 3 VTQETLQEALQKYFGFDAFKG--NQEAIIQNLLNRDDTFVIMPTGG---------GKSLC 51
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
P +L G ISP+++ ++ + G S Q + + +
Sbjct: 52 YQLPA--LMLEGTAI----VISPLIA-----LMKNQVDSIRGYS---QSDDVAHFLNSSL 97
Query: 151 NKAILEELRLVKPRI-----KLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCV 204
KA +++LVK I KLLY+ PE E+ + R ++++ VDEAHC+
Sbjct: 98 TKA---QMKLVKQAINDGNTKLLYIAPETLTKDENIEFF-----RTVNVSFVAVDEAHCI 149
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
SEWGHDFRP YRR+ + G +PIIALTATA P V+ DI+ L + F +S
Sbjct: 150 SEWGHDFRPEYRRIRSMLDGIGQEVPIIALTATATPKVQSDILKNLGLRSEH-AFMSSFN 208
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
R NL+Y+V + + + + I+ G+ GIIY ++R+ ++A L+
Sbjct: 209 RENLYYEVRPKGKPEQAVRQIIQVIKGMPGQ------SGIIYVQSRKAAEEIAKVLQVND 262
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ R+R Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ MP SI Y
Sbjct: 263 IKAAPYHAGLDAKTRTRTQDEFLMEDVDVIVATIAFGMGIDKPDVRFVIHFDMPKSIENY 322
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YQE+GRAGRDGL+ C +++ LE ++ +RE
Sbjct: 323 YQETGRAGRDGLEGRCIAFYAYKDMLKLEKFLRDKPVAERE 363
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 212/418 (50%), Gaps = 58/418 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ FG F+ Q +AI + L+ D FV MPTG G + + +
Sbjct: 629 QEMMKIFHKRFGLHQFRYN-QLEAI-NATLQGEDTFVLMPTGG----GKSLCYQLPACVS 682
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQT----KT 149
PG + ISP+ K+ IV L L++ + + +
Sbjct: 683 PGVTVV-----------ISPL-----------KSLIVDQIQKLTTLDIPATSLSGDLGER 720
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L +P +KLLYVTPE+ + + LQ+L LA V+DEAHCVS+WG
Sbjct: 721 EAGRIYMQLSRKEPIVKLLYVTPEKVSASNKLISALQNLYERGLLARFVIDEAHCVSQWG 780
Query: 209 HDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y++L ELR+ F +P++ALTATA P V++DI + L N+P +VF S R+N
Sbjct: 781 HDFRPDYKKLHELRKKFP--QVPMMALTATATPRVQKDIHNQLNMNRP-QVFTMSFNRTN 837
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK-- 323
L Y V+ K+ E C+ K + + GIIYC +R +A++L+R
Sbjct: 838 LKYAVL--------PKKPKKVDEDCISWIKKHYPRDSGIIYCLSRNDCDAMAESLQRAGL 889
Query: 324 --------VNKHERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ Y
Sbjct: 890 LALSYHAGLSDGNREYVQTKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGY 949
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YQESGRAGRDG S+C +++S ++ +I D + + N SM+ +CE
Sbjct: 950 YQESGRAGRDGEISHCILFYSYADVHRIKRIISMDREGDSQTKATHYNNLHSMVHFCE 1007
>gi|330841793|ref|XP_003292875.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
gi|325076832|gb|EGC30587.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
Length = 884
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 207/388 (53%), Gaps = 58/388 (14%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
+ +FG SF+ LQ++ I IL D FVS+PTG G + +IP D
Sbjct: 407 RMVFGNSSFR-PLQQQVINSIL-HGRDTFVSLPTGG----GKSLC----FQIPSLVD--- 453
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL-------IVSGQTKTENKA 153
+ IS +LS +D +++L+L I S T +N+
Sbjct: 454 -------SSGISIVLSPLLSLMQDQ----------VHKLKLLGVPACSINSSNTPLQNRK 496
Query: 154 ILEELRLVKPR--IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+E+L L K I ++YV+PER F +L L ++ ++VDEAHC+SEWGHDF
Sbjct: 497 TIEQL-LDKDNCNISIVYVSPERLSQTEFLEVLNTLNNQGRIKRLIVDEAHCISEWGHDF 555
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR++ R+ N +PI A TATA+PSV+ DI + LK + P + +S R+NL Y
Sbjct: 556 RPAYRKISLFRENFPN-VPIAAFTATAKPSVESDIKNELKLHNPVTI-ASSFLRTNLLYQ 613
Query: 272 VIFDDLLKD-SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-VNKH-- 327
+ + S+A + ++I K ++ +CGIIYC T L+ L + ++ H
Sbjct: 614 IRSKSPDQSRSFADIADYI-----KMRQSRSCGIIYCATTNDCELLSQYLNEENIDSHFY 668
Query: 328 -------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER +Q+++ +I T++FGMGID ++VRF++H+ MPSSI AYYQ++GR
Sbjct: 669 HGSLKNSERVEIQKAWTNKSFKIIVTTLAFGMGIDVKDVRFIIHYTMPSSIEAYYQQTGR 728
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKT 408
AGRDGL S C +Y++ + + +I+T
Sbjct: 729 AGRDGLPSECILYYTSNDYFKISRIIQT 756
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 144/411 (35%), Positives = 213/411 (51%), Gaps = 48/411 (11%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+T+ +FG F+ Q +A LL D F+ MPTG +S P
Sbjct: 12 MTSLFNKVFGLHRFRTN-QLEACNAALL-GKDCFILMPTGG---------GKSLCYQLPA 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE-NKAI 154
I++G V ISP+ S D+ S + G L +SG+ + +
Sbjct: 61 ---IVSGGV---TIVISPLKS-----LIQDQVSKLNG---LEVPAAHLSGELSQQVASGV 106
Query: 155 LEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L P+ KLLYVTPE+ + +E L+ L + L V+DEAHCVS+WGHDFRP
Sbjct: 107 YMDLARRTPQTKLLYVTPEKVSSSEKLLSTLKSLYQRGLLDRFVIDEAHCVSQWGHDFRP 166
Query: 214 TYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
Y++L LR+ F G +P++ALTATA P V++DI+ L P + F S R+NL Y V
Sbjct: 167 DYKKLCVLRKSFPG--VPMMALTATATPRVRRDILHQLGMTDP-RWFVQSFNRTNLHYSV 223
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ K + KE +E L + GI+YC +R+ ++D L R
Sbjct: 224 ----MPKKVKSATKEVLE--LINSRFRSKTGIVYCLSRKECETVSDELCRNGTSACAYHA 277
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ER+R+Q+ + VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAG
Sbjct: 278 GMSDKERARIQDLWPE-HYKVICATIAFGMGIDKPDVRFVIHYSLPKSVEGYYQESGRAG 336
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
RDG S C ++++ H K ++ +I D E ++ N L M++YCE
Sbjct: 337 RDGEASDCILFYNYHDKMRMQKLIHMDKEATYESRKVHMDNLLRMVQYCEN 387
>gi|294673710|ref|YP_003574326.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473219|gb|ADE82608.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 607
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/404 (34%), Positives = 214/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ SF+ + Q++ IRH++ +D V MPTG G + + PG +
Sbjct: 7 LRQYFGYSSFR-QNQEEIIRHVI-AGNDALVLMPTGG----GKSICYQIPALALPGITIV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T RS+ + E + SG T + I +
Sbjct: 61 -----------ISPLISLM-------KDQVETLRSNGIEAEALNSGNDPTLDTVIRR--K 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +IKLLY++PE+ + E Y +QHL +++ +DEAHC+S WGHDFRP Y +LG
Sbjct: 101 CLAGQIKLLYISPEKLLAE-MDYFMQHL----QISLFAIDEAHCISHWGHDFRPEYTQLG 155
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ N +P++ALTATA+ +QDI++ LK + F +S R NL V
Sbjct: 156 VLREKFPN-VPMMALTATADKITRQDILTQLKLRNA-REFVSSFDRPNLSLSVKRGYKSA 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + FI+ + N+ GIIYC +R+ T +A LR+K ++ ER
Sbjct: 214 EKMHFILNFIKA------RPNDAGIIYCLSRKTTEKVAADLRKKGINAAAYHAGLSSLER 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S+ QE F ++ V+ ATI+FGMGID+ NVR+V+H+ MP SI ++YQE GRAGRDG +
Sbjct: 268 SQTQEQFKNDQLLVVCATIAFGMGIDKSNVRWVIHYNMPKSIESFYQEIGRAGRDGAPAD 327
Query: 390 CRIYHSEHSKKSLEYVIK-TDTSTKREQLELKFKNYLSMLEYCE 432
+++ SL +I+ T+ + + Q ++ M EY E
Sbjct: 328 TVLFY------SLADIIQLTEFARQSGQQDVNMDKLKRMQEYAE 365
>gi|329962624|ref|ZP_08300572.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328529655|gb|EGF56553.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 727
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 207/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LTDQLKKYFGFDTFKG--NQEAIIQNLLDGNDTFVLMPTGGGKSLCYQLPSLLMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K++I +SD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEDDGIAHFINSSL------NKSAIDQVKSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T KLLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 T------------------KLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L + +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVEA-QVFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A+V I K + N GIIYC +R+ +LA+ L+
Sbjct: 210 NLYYEV------RPKTANVDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 261
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQ
Sbjct: 262 ARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 322 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|393241346|gb|EJD48868.1| ATP-dependent DNA helicase [Auricularia delicata TFB-10046 SS5]
Length = 852
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 213/427 (49%), Gaps = 63/427 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG++SF+ ++K I +R +D+ V MPTG +G + +IP AD
Sbjct: 52 LTKTFGYESFRG--KQKEIVQAAVRGNDVLVVMPTG----MGKSLC----FQIPAIAD-- 99
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV---SGQTKTE-NKAIL 155
+ +SP+L+ + + L QL++ V +G+T + I+
Sbjct: 100 ----THGVSLVVSPLLALMKNQVKR-----------LEQLQVPVQSWTGETPEHMRQEII 144
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L+ PR +LLY+TPE F +L+ + + N+L VVDEAHC+SEWGHDFR Y
Sbjct: 145 RDLQSGHPRTRLLYITPESMSRPQFRGVLKVVYQQNELNRFVVDEAHCISEWGHDFREEY 204
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIF 274
R+LG RQ + +PI+ALTA+A P V++DII L + F R NLFY++ +
Sbjct: 205 RKLGNFRQMFPD-VPIMALTASATPYVREDIIRSLGMENDQLLTVVHPFNRHNLFYEIRY 263
Query: 275 DDLLKDSYA---HVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
D A HV+E+I+K L + G+IYCR R+ +LA LR+K
Sbjct: 264 MPSTWDQEAQMKHVQEYIQK-LHDKRGCPSSGLIYCRKRDTCNELAAFLRKKGINAKPYH 322
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ + + G ++V T++FGMGID+ +VR+V+H+ +P S Y
Sbjct: 323 KGLGAATLDLTLRQWEETTDGQGAGAVDVAVCTVAFGMGIDKPDVRYVIHFDLPKSFEGY 382
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSL---------EYVIKTDTSTKREQLELKFKNYL 425
YQE+GRAGRDG + C +Y+S S+ E V K E E ++
Sbjct: 383 YQETGRAGRDGNSAKCILYYSRKDALSIRALQQRARNERVAKVSLEAAPESGERSAESLA 442
Query: 426 SMLEYCE 432
++L Y E
Sbjct: 443 ALLHYAE 449
>gi|317475725|ref|ZP_07934984.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316908108|gb|EFV29803.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 727
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 207/392 (52%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI LL +D FV MPTG G + + + G
Sbjct: 8 LTDQLKNYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGG----GKSLCYQLPSLLMEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + I + NK+ +
Sbjct: 62 TGIV-----------ISPLIALM--------KNQVDAMRNFSEEDGIAHFINSSLNKSAI 102
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 103 DQVKSDILAGRTKLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + G + P+IALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 159 EYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRPNLYYEV- 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ A+V + I K + N GIIYC +R+ +LA+ L+
Sbjct: 216 -----RPKTANVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGR
Sbjct: 269 MDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C +++ + LE ++ ++E
Sbjct: 329 DGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|218128449|ref|ZP_03457253.1| hypothetical protein BACEGG_00017 [Bacteroides eggerthii DSM 20697]
gi|217989340|gb|EEC55653.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 727
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 207/392 (52%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI LL +D FV MPTG G + + + G
Sbjct: 8 LTDQLKNYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGG----GKSLCYQLPSLLMEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + I + NK+ +
Sbjct: 62 TGIV-----------ISPLIALM--------KNQVDAMRNFSEEDGIAHFINSSLNKSAI 102
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 103 DQVKSDILAGRTKLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISEWGHDFRP 158
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YRR+ + G + P+IALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 159 EYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRPNLYYEV- 215
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ A+V + I K + N GIIYC +R+ +LA+ L+
Sbjct: 216 -----RPKTANVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAG 268
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAGR
Sbjct: 269 MDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C +++ + LE ++ ++E
Sbjct: 329 DGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|323701530|ref|ZP_08113203.1| ATP-dependent DNA helicase, RecQ family [Desulfotomaculum
nigrificans DSM 574]
gi|333924642|ref|YP_004498222.1| RecQ familyATP-dependent DNA helicase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323533539|gb|EGB23405.1| ATP-dependent DNA helicase, RecQ family [Desulfotomaculum
nigrificans DSM 574]
gi|333750203|gb|AEF95310.1| ATP-dependent DNA helicase, RecQ family [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 685
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 204/401 (50%), Gaps = 49/401 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L A L FGF F+ Q++ + ++ D+ MPTG +S P
Sbjct: 3 QLLAALNKYFGFTDFRPG-QREVVEQVMA-GQDVLAIMPTG---------QGKSLCYQLP 51
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G F+L G I+ ++S +D S+ T + L+Q + S T E++
Sbjct: 52 G--FMLPG--------ITLVISPLVALMKDQVDSLHTRK--LHQATFLNSQLTPEEHRQR 99
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L +R + + KL+YV PER T SF L+ + L +VVDEAHC+S+WGHDFRP
Sbjct: 100 LAGIR--QGKYKLIYVAPERLRTRSFSALISDM----PLDLLVVDEAHCISQWGHDFRPD 153
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y L E Q ++ALTATA P V+QDI+ L + KV S R NL+ +
Sbjct: 154 YLYLREFIQGLARRPRVLALTATATPRVQQDILQQLGIEQAVKVVAGSD-RPNLY---LA 209
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------- 324
L A ++ G + GIIY TR+ T ++A L ++
Sbjct: 210 ARRLASGQAKLQALTLVLAG----LSGSGIIYTATRKETEEVAAFLISQLKLPAAPYHAG 265
Query: 325 -NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+R+ VQESF+ GE V+ AT +FGMGID+Q++RFV+H+ MP+SI AYYQE GRAGR
Sbjct: 266 MTPEQRAAVQESFINGEYPVVVATNAFGMGIDKQDIRFVIHYSMPASIEAYYQEVGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNY 424
DG + C + ++ + +++I D T RE L + +K Y
Sbjct: 326 DGQPATCTLLYTPRDRALQDWMINNDALT-REHLVIFWKAY 365
>gi|89890375|ref|ZP_01201885.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89517290|gb|EAS19947.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 731
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 200/379 (52%), Gaps = 48/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGFD F+ LQKK I LL D+FV MPTG G + + + G
Sbjct: 8 LEEQLKKYFGFDQFRG-LQKKVITS-LLNKEDVFVIMPTGG----GKSLCYQLPALMQEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ + G SD + ++ S +KT+ + +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAIRGISDHDGVAHVLNSSLSKTDVQQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ KLLYV PE E + L + K++++ VDEAHC+SEWGHDFRP
Sbjct: 106 KNDIS--NGITKLLYVAPESLTKEEYVDFL----KGEKISFLAVDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L ++ IPII LTATA P V++DI+ L+ + ++ S R NLFY+V
Sbjct: 160 YRNLRKIIDRIDERIPIIGLTATATPKVQEDILKNLQISDA-TTYQASFNRPNLFYEVRP 218
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRKVNK 326
D A + FI++ GK GI+YC +R+ +LA DA+
Sbjct: 219 KTGQVD--ADITRFIKQHEGK------SGIVYCLSRKRVEELAQVLQVNGIDAVPYHAGL 270
Query: 327 HERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
++RV Q+ F+ + +V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAGRD
Sbjct: 271 DAKTRVLHQDKFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRD 330
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + +C Y+S + LE
Sbjct: 331 GGEGHCLAYYSYKDIEKLE 349
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 216/414 (52%), Gaps = 59/414 (14%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARS 88
+Q + LK +FGF F+ ++AI +L + FV MPTGA SL + +V+ +
Sbjct: 2 DQTVKENLKEIFGFSQFRG--NQEAIVDNILGGSNTFVIMPTGAGKSLCYQLPAVIKNGT 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
V I P + N V N + +++++L S K
Sbjct: 60 AVVISPLIALMKN-QVDQLNAFG---INAYFLN----------------------STLNK 93
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+E + +E+ + KLLYV PE E L+ ++++ +DEAHC+SEWG
Sbjct: 94 SETNKVKKEV--LAGNTKLLYVAPESLTKEENVKFLKEA----NISFVAIDEAHCISEWG 147
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YRR+ + G +PIIALTATA P V+QDI L+ + +FK+S R+NL
Sbjct: 148 HDFRPEYRRIKSIIAQIGEKLPIIALTATATPKVQQDIQRNLQMEEA-DLFKSSFNRTNL 206
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V + ++ + ++I+ GK GIIYC +R+ ++A L+
Sbjct: 207 YYEV-RPKIKNETKKQIIKYIKGQKGK------SGIIYCLSRKKVEEIASLLKVNGINAA 259
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++++ R + Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+
Sbjct: 260 PYHAGLDQNVRIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQET 319
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDGL+ +C +++ L+ K T+RE ++ + M Y E
Sbjct: 320 GRAGRDGLEGHCLMFYKYDDIIKLDKFNKDKPVTERENAKILLQ---EMAAYAE 370
>gi|374597031|ref|ZP_09670035.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
gi|373871670|gb|EHQ03668.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
Length = 732
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 203/384 (52%), Gaps = 56/384 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L +LK FGF FK LQ++ I I+ H+ FV MPTG G + + I
Sbjct: 7 DLHKQLKKYFGFSQFKG-LQEQVITSIV-NGHNTFVIMPTGG----GKSLCYQLPALIAE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ ++ + G S + + +++ NK+
Sbjct: 61 GTAIV-----------VSPLIA-----LMKNQVDAIRGISSEHGVAHVLNSSL---NKS- 100
Query: 155 LEELRLVKPRI-----KLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E+R VK I KLLYV PE E L R K++++ VDEAHC+SEWGH
Sbjct: 101 --EVRQVKEDITNGITKLLYVAPESLTKEENVEFL----RSVKISFMAVDEAHCISEWGH 154
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR L + + G++IPII LTATA P V++DI+ L K FK S R NL+
Sbjct: 155 DFRPEYRNLRTIIKRIGDNIPIIGLTATATPKVQEDILKNLGIPDA-KTFKASFNRPNLY 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVN 325
Y++ K+ A + F+++ GK GIIYC +R+ +LA L+ + V
Sbjct: 214 YEI--RPKTKNVDADIIRFVKQNEGK------SGIIYCLSRKRVEELAQTLQVNGIKAVP 265
Query: 326 KHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
H R R Q+ F+ + +V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+G
Sbjct: 266 YHAGLDPKTRIRHQDMFIMEDTDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETG 325
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + +C ++S + LE
Sbjct: 326 RAGRDGGEGHCLAFYSYKDIEKLE 349
>gi|417846212|ref|ZP_12492224.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
gi|341953231|gb|EGT79743.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21639]
Length = 627
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 207/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 28 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQVPALCF- 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S ++ + D+ +D + Q + +NK
Sbjct: 76 -----EGLTLVISPLIS--LMKDQVDQLQANGIEADFLNSSQTLEQQQRVQNK------- 121
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 122 LISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLG 177
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI++ L P++ + S R N+ Y L+
Sbjct: 178 GLKASFPHA-PIMALTATADHATRQDILTHLNLENPHR-YIGSFDRPNIRYT------LE 229
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y +++ L + K+ GIIYC +R +A++LR K + R
Sbjct: 230 EKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETALR 286
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R + V+ ATI+FGMGI++ NVRF+ H+ +P SI +YYQE+GRAGRD L +
Sbjct: 287 ERVQQDFQRDNVQVVVATIAFGMGINKSNVRFIAHFDLPRSIESYYQETGRAGRDDLPAE 346
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 347 AVLFYEPADYAWLQKILLEKPETSQRQIE 375
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 205/387 (52%), Gaps = 48/387 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FGF+ F+ Q I +L+ ++ FV MPTGA + + A S G +
Sbjct: 9 LKKIFGFNQFRGNQQ--LIVDNILKGNNTFVIMPTGAGKSLCYQLPAVSN----KGTAIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ K + S + S +KTE+ + E+
Sbjct: 63 -----------ISPLIALM-------KNQVDQLNSFGINAHFLNSTLSKTESNRVKGEVS 104
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
KLLYV PE E L+ ++++ +DEAHC+SEWGHDFRP YR++
Sbjct: 105 --AGLTKLLYVAPESLTKEENVKFLKSA----DISFVAIDEAHCISEWGHDFRPEYRKIK 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+ G+++P+IALTATA P V+QDI L+ + +FK+S R+NL+Y+V +
Sbjct: 159 SIIAQIGDNLPVIALTATATPKVQQDIQRNLQMEEA-DLFKSSFNRTNLYYEV-RPKVKS 216
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
++ + ++I+ GK GIIYC +R+ T++A+ L+ ++ H R
Sbjct: 217 ETKKEIIKYIKSQKGK------SGIIYCLSRKKVTEIAELLKVNGINAAPYHAGLDGHVR 270
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ Q+ F+ E++VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GR+GRDGL+ +
Sbjct: 271 VKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRSGRDGLEGH 330
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQ 416
C +++ LE K +RE
Sbjct: 331 CLMFYRYEDIIKLEKFNKDKPVNEREN 357
>gi|392396238|ref|YP_006432839.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390527316|gb|AFM03046.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 725
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 201/368 (54%), Gaps = 55/368 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ +F+ LQ+ I + + +D V MPTG G + +IP
Sbjct: 10 LQQYFGYSTFR-PLQEDIISSVYAK-NDTLVLMPTGG----GKSIC----FQIPA---IT 56
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENKAILEEL 158
L+G I ++S +D ++ T G S + + S Q E + I E+
Sbjct: 57 LDG--------ICIVISPLIALMKDQVNALQTNGISAAF----LNSSQDMAEQREIESEV 104
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ + +IKLLYV+PE+ +TESF Y LQ L ++ VDEAHC+S+WGHDFRP Y +L
Sbjct: 105 K--QGKIKLLYVSPEKLLTESFTYFLQSL----SISLFAVDEAHCISQWGHDFRPEYTQL 158
Query: 219 GELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L+ +F +P+IALTATA+ ++DIIS L P + F S R NL +V+
Sbjct: 159 KSLKDRFP--FVPMIALTATADKITRRDIISQLGLENPTE-FVASFNRPNLSLNVL---- 211
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
+Y + + L + N GIIYC +R++T ++A L++ +N H
Sbjct: 212 --PAYKRMDSIVSYIL---RRPNESGIIYCLSRKNTENVAARLQKAGMKADYYHAGLNAH 266
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ERSRVQ+ F+ +I AT++FGMGID+ NVR+V+H+ +P +I YYQE GRAGRDGL+
Sbjct: 267 ERSRVQDDFITDRTPIICATVAFGMGIDKPNVRWVMHYNIPKNIEGYYQEIGRAGRDGLK 326
Query: 388 SYCRIYHS 395
+++S
Sbjct: 327 GDTMLFYS 334
>gi|423316589|ref|ZP_17294494.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
gi|405583639|gb|EKB57579.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
Length = 733
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 210/394 (53%), Gaps = 56/394 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ +LK FGF +FK +++ + LL D+FV MPTG +S P
Sbjct: 8 LSQELKKYFGFSTFKG--RQEEVISSLLEGKDVFVLMPTGG---------GKSLCYQLPA 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+L G +SP+++ ++ V G S+ + ++ S +T+ + +
Sbjct: 57 --LLLEGTAI----VVSPLIA-----LMKNQVDAVNGLSNEDGVAHVLNSSLNRTQTQQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+++ K + KLLYV PE + + + L+ + K++++ +DEAHC+SEWGHDFRP
Sbjct: 106 FDDIE--KGKTKLLYVAPESLIKDEYSDFLKSV----KISFVAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR L + + + +PIIALTATA P V+ DI L + KV+K+S R NL+Y+V
Sbjct: 160 YRNLKNIIEKIAD-VPIIALTATATPKVQDDIQKTLGMSDA-KVYKSSFNRPNLYYEVRP 217
Query: 273 -IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRK 323
I D + +FI + GK GIIYC +R+ + A +AL
Sbjct: 218 KINVD------KEIVKFINQRKGK------SGIIYCLSRKKVEEFAQLLQVNGINALPYH 265
Query: 324 VNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+GRA
Sbjct: 266 AGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + +C ++ + LE + +++E
Sbjct: 326 GRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKE 359
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 214/414 (51%), Gaps = 46/414 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ LK F F+ Q + I + L D FV MPTG + + A
Sbjct: 853 EVKKTLKDQFHLRGFRPH-QLETI-NATLAGKDCFVLMPTGGGKSLCYQLPA-------- 902
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA- 153
+ +G R ISP+LS +D+ + + L+ ++G+ E +
Sbjct: 903 ---VVQSGKTRGVTVVISPLLS-----LMEDQVNHLRA---LHIQAFYINGELSYEQRRF 951
Query: 154 ILEELR--LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
I+ LR V+ I++LYVTPE + ++ LLQ L +LA IV+DEAHCVS+WGHD
Sbjct: 952 IMNALREPQVEKFIQVLYVTPEMLSKNQAMVNLLQDLHHRQRLARIVIDEAHCVSQWGHD 1011
Query: 211 FRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
FRP Y+ LGE R QF G +P++ALTATA +VK D I L ++F S R NL+
Sbjct: 1012 FRPDYKALGETRRQFIG--VPVMALTATATQNVKVDTIHNLGIQG-CEIFAQSFNRPNLY 1068
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVN---- 325
Y+V +D+ + + I K GI+YC +R+ +A LR K N
Sbjct: 1069 YEVRTKGKREDTLQKIADII-----KTQYRGQSGIVYCLSRKKCEVIAQQLREKHNISAH 1123
Query: 326 -------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
E+S Q+S+ G VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 1124 HYHAGMESAEKSETQKSWQAGGYKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQET 1183
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG +S C +++ L+ +IK + R+Q E ++ +++++CE
Sbjct: 1184 GRAGRDGKRSGCYLFYGYQDTTILKKMIKEGEGS-RQQKERQYAMLRNVVQFCE 1236
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 149/414 (35%), Positives = 218/414 (52%), Gaps = 56/414 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADF 98
LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 707 LKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------------V 752
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA-ILEE 157
+ +G+ R ISP+LS D+ S + + L +++G+T E + IL
Sbjct: 753 VTSGSTRGVTIVISPLLS-----LMQDQVSHL---NKLNIKAYLLNGETPKEQRQWILST 804
Query: 158 LR--LVKPRIKLLYVTPE-----RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
L + I+LLY+TPE +A+T+S L L KLA IV+DEAHCVS+WGHD
Sbjct: 805 LSGFSAEEDIELLYITPEMVNKSQAITKS----LDKLNCSRKLARIVIDEAHCVSQWGHD 860
Query: 211 FRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
FRP Y+ LGELR Q G +P++ALTATA +VK D+I LK +VF S R NL
Sbjct: 861 FRPDYKELGELRNQLPG--VPMMALTATATENVKVDVIHNLKMEG-CEVFSQSFNRPNLT 917
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V + A + + I K + AN GI+YC +R+ +A LR
Sbjct: 918 YEVRIKKKGTEVLASIADTI-----KTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAE 972
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ ER+++Q+++ G +VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 973 HYHAGMDSGERAKIQQAWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQET 1032
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG +S C +Y+ ++ +I +K +Q + + ++++YCE
Sbjct: 1033 GRAGRDGKRSGCYLYYCYKDTSTISSMIDKGEGSK-QQKNRQRQMLHNVVQYCE 1085
>gi|163756913|ref|ZP_02164021.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
gi|161323149|gb|EDP94490.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
Length = 732
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 203/381 (53%), Gaps = 46/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L +LK FGF FK LQ++ I+ I+ + FV MPTG G + + +
Sbjct: 5 EIDLYKELKKHFGFGQFKG-LQEEVIKSII-SNKNTFVIMPTGG----GKSLCYQLPALM 58
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ ++ + D ++ + + + + S TK E +
Sbjct: 59 KEGTAIV-----------VSPLIA--LMKNQVDALRGISSQDGIAHV--LNSSLTKAETR 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E++ KLLYV PE E L R +++++ VDEAHC+SEWGHDFR
Sbjct: 104 QVKEDI--TNGITKLLYVAPESLTKEENVAFL----RTVQISFMAVDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR L + G++IPII LTATA P V++DI+ L FK S R NL+Y+V
Sbjct: 158 PEYRNLKNIIGKIGDNIPIIGLTATATPKVQEDILKNLGMTDA-NTFKASFNRPNLYYEV 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------R 322
KD A + FI++ GK GI+YC +R+ +LA L+
Sbjct: 217 --RPKTKDVDADIIRFIKQNQGK------SGIVYCLSRKRVEELAQVLQVNGINAVPYHA 268
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +R++ Q+ F+ + +V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAG
Sbjct: 269 GLDPKKRAKHQDMFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 328
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + +C +++ + LE
Sbjct: 329 RDGGEGHCLAFYAYKDIEKLE 349
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 211/417 (50%), Gaps = 56/417 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ FG F+ Q +AI LL D FV MPTG G + + +
Sbjct: 644 QEMMKIFHKRFGLHQFRFN-QLEAINAALL-GEDAFVLMPTGG----GKSLCYQLPACVS 697
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG----QTKT 149
G + +SP+ K+ IV L L++ + ++ +
Sbjct: 698 LGVTVV-----------VSPL-----------KSLIVDQVQKLTTLDIPATSLSGDKSDS 735
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L P IKLLYVTPE+ + + LQ+L LA ++DEAHCVS+WG
Sbjct: 736 EASRIYMQLSRKDPIIKLLYVTPEKLSASNRLISALQNLYERGLLARFIIDEAHCVSQWG 795
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L ELRQ N + ++ALTATA P V++DI++ L ++P +VF S R+NL
Sbjct: 796 HDFRPDYKKLHELRQKFPN-VAMMALTATATPRVQKDILNQLNMSRP-QVFTMSFNRTNL 853
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK--- 323
Y V+ K+ E C K + + GI+YC +R +A++L+R
Sbjct: 854 KYAVL--------PKKPKKVDEDCTSWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAGLS 905
Query: 324 -------VNKHERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ +R VQ ++ + VI ATI+FGMGID+ +VR+V+H +P S+ YY
Sbjct: 906 ALSYHAGLSDSDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSMEGYY 965
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QESGRAGRDG S+C +++S + ++ +I D R + N SM+ +CE
Sbjct: 966 QESGRAGRDGEISHCILFYSYTDVQRIKRIISMDREGDRHTKATHYNNLHSMVHFCE 1022
>gi|412989281|emb|CCO15872.1| predicted protein [Bathycoccus prasinos]
Length = 857
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 208/427 (48%), Gaps = 58/427 (13%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG +SF+ ++ I + D+FV MPTG + + A G +
Sbjct: 358 IFGNESFRP--NQREICEACVANEDVFVLMPTGGGKTLCYALPA----VCSEGVTIVF-- 409
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
SP++S D+ + D+ + L+ S + E K++L EL
Sbjct: 410 ---------SPLVS-----LVQDQVKKLVYEFDIPSVALLGSA-GEGETKSVLRELYKEN 454
Query: 163 PRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P IKLLYVTPE+ + S Q L KLA VVDEAHCVS WGHDFRP Y++L EL
Sbjct: 455 PTIKLLYVTPEKFQASPSLRNAFQSLFEKGKLARFVVDEAHCVSSWGHDFRPDYKKLSEL 514
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
++ S+P+ LTATA + D++ +LK K K F TS R+N+ ++V L D
Sbjct: 515 KKLFP-SVPLTGLTATATDKARDDVLKILKITKTAKKFVTSFNRANIEFEVKAKGDLADD 573
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---RRK--------------V 324
K +I + GK N+ GI+YC +R+ +A AL +RK +
Sbjct: 574 DKFAK-WIARTFGK----NDNGIVYCLSRDDCVKVAQALNSEKRKNPETAPSAVPYHAGM 628
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ R Q+ + +G+++V ATI+FGMGID+ NVR+VVH P ++ YQE GRAGRD
Sbjct: 629 TEKARREAQDDWTKGKVSVCVATIAFGMGIDKANVRWVVHHSPPKTLEGLYQEIGRAGRD 688
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ-----------LELKFKNYLSMLEYCEQ 433
GL++ +S +E ++K +K Q L K K+Y+ + C +
Sbjct: 689 GLKARGVSLYSHQDLGRVERLLKMPQKSKGGQSKAARLEKALPLLQKVKDYMEDRQTCRR 748
Query: 434 GYFLVIL 440
L L
Sbjct: 749 VALLSYL 755
>gi|383125120|ref|ZP_09945776.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|382983453|gb|EIC72782.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 620
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 211/414 (50%), Gaps = 56/414 (13%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K + + LK+ FG+DSF+ LQ++ IRH LL D V MPTG G + +
Sbjct: 14 KFKQMLMKETLKSYFGYDSFR-PLQEEIIRH-LLNKQDSLVLMPTGG----GKSICYQLP 67
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + +SP++S K + T +++ + S +T
Sbjct: 68 ALLSEGTAVV-----------VSPLISLM-------KDQVETLQANGIAAGALNSSNDET 109
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EN + ++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGH
Sbjct: 110 ENANLRRAC--IEGRLKLLYISPEKLIAEK-----DYLLRDMSISLFAIDEAHCISQWGH 162
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y ++G L +QF +PIIALTATA+ ++DII L +P + F +S R N+
Sbjct: 163 DFRPEYTQMGMLHQQFP--QVPIIALTATADKITREDIIRQLHLIQP-RTFISSFDRPNI 219
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
DV K+ + EFI + GIIYC +R T +A L+++
Sbjct: 220 SLDVKRGFQAKEKNKAILEFIHR------HREESGIIYCMSRNKTETVAQMLQKQGIRCG 273
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE
Sbjct: 274 VYHAGLSPQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEI 333
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDGL S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 334 GRAGRDGLPSDTVLFYSLG-----DLILLTKFATESNQQTINLEKLQRMQQYAE 382
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 217/427 (50%), Gaps = 63/427 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 396 KELEVNNKKVFGNHSFR--PNQREIINASMSGCDVFVLMPTGG----GKSLTYQLPALIR 449
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S +D ++ L + E +
Sbjct: 450 PGITLV-----------ISPLVS----LIQDQIMHLLQANIPAAYLS---ANMEWAEQQE 491
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCVSEWGHD 210
IL EL + KLLYVTPE+ LL+HL + LA IV+DEAHCVS+WGHD
Sbjct: 492 ILRELNSDYCKYKLLYVTPEKVARSD--NLLRHLDNLHFRELLARIVIDEAHCVSQWGHD 549
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG L+Q N+ P++ALTATA SVK+D++ L +F+ S R NL+Y
Sbjct: 550 FRPDYQGLGILKQKFPNT-PVLALTATATASVKEDVVQALGLVNCI-IFRQSFNRPNLWY 607
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-------- 322
V+ K + +FI + N + CGIIYC +R +A+ L+
Sbjct: 608 SVV--PKTKKCLEDIDKFI-----RVNHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFY 660
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +R+ VQ+ + + EIN+I AT++FGMGI++ +VRFV+H +P SI Y+QE GR
Sbjct: 661 HGSMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGR 720
Query: 381 AGRDGLQSYCRIYHS-------EH--SKKSLEYVIKTDTSTKREQ------LELKFKNYL 425
AGRDG +S C +Y++ +H S+ ++E T + LE +N +
Sbjct: 721 AGRDGQRSSCILYYNYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLV 780
Query: 426 SMLEYCE 432
M+ YCE
Sbjct: 781 RMVSYCE 787
>gi|410627347|ref|ZP_11338088.1| ATP-dependent DNA helicase RecQ [Glaciecola mesophila KMM 241]
gi|410153093|dbj|GAC24857.1| ATP-dependent DNA helicase RecQ [Glaciecola mesophila KMM 241]
Length = 602
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 200/392 (51%), Gaps = 54/392 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D F+ + Q I IL + HD+ V MPTG + + A +
Sbjct: 15 LKTVFGYDEFR-DGQHDVIEKIL-QGHDVLVLMPTGGGKSLCYQIPA-----------LV 61
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
L G ++ ++S +D ++V +G S Y I S + E + +
Sbjct: 62 LEG--------LTIVVSPLIALMKDQVDALVASGVSAAY----INSNLSSEEMHNVYRGM 109
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ R KL+YV PER + F L L +LA VDEAHCVS WGHDFR YRRL
Sbjct: 110 Q--DGRYKLIYVAPERLMQFDFIQRLHSL----ELALFAVDEAHCVSHWGHDFRKEYRRL 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G+L+Q N +P++ LTATA+ + + DI+ L P+ +FK S R N+ Y+ +F
Sbjct: 164 GQLKQQFPN-VPVVGLTATADITTRSDILQQLALQDPF-IFKGSFDRPNIRYNQLF---- 217
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
Y + I+ + GIIYC +R+ DL+ AL R+ +
Sbjct: 218 --KYKATDQVIQYV----KQQEGSGIIYCNSRKKVDDLSIALARQGINCAGYHAGLEGPI 271
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R ++Q F++ I++I AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GRAGRDG+ +
Sbjct: 272 RDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHFDLPRSVEAYYQETGRAGRDGMPA 331
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ E + I + +R +EL+
Sbjct: 332 EALLLFDEKDAARIRQWIGMGDNPERLDIELQ 363
>gi|372209002|ref|ZP_09496804.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium S85]
Length = 734
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/399 (34%), Positives = 206/399 (51%), Gaps = 63/399 (15%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARSRV 90
+L LK FGF+ FK LQ+ IR + D FV MPTG SL + +++ + +
Sbjct: 7 DLYTPLKKYFGFNKFKG-LQEDVIRSVA-EGKDTFVIMPTGGGKSLCYQLPALMKEGTAI 64
Query: 91 RIPPGADFILN--GNVR--SRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ P + N +R S N I+ +L+S +KT + +SD IV+G
Sbjct: 65 VVSPLIALMKNQVDAIRGISDNPGIAHVLNSSL-----NKTEVAKVKSD------IVNGV 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE + + L+ K+++ +DEAHC+SE
Sbjct: 114 TK------------------LLYVAPESLTKDEYVDFLKK----QKISFFAIDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YR L + G+ +PII LTATA P V++DII L FK S R
Sbjct: 152 WGHDFRPEYRNLRRIITRIGD-VPIIGLTATATPKVQEDIIKTLGMTNA-NTFKASFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NLFY+V KD + + FI + LGK G+IYC +R+ ++A L+
Sbjct: 210 NLFYEV--RPKTKDVTSDIIRFIRQRLGK------SGVIYCLSRKKVEEIAQTLQVNGIS 261
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H +P S+ +YYQ
Sbjct: 262 ALPYHAGLDAKTRAKHQDMFLMEDVDVIVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRD + YC ++S + LE + +++E
Sbjct: 322 ETGRAGRDDGEGYCLAFYSYKDIEKLEKFMANKPVSEQE 360
>gi|258647142|ref|ZP_05734611.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260853106|gb|EEX72975.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 726
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 197/385 (51%), Gaps = 50/385 (12%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
GK++ QE KL + FGFDSFK ++AI LL D+FV MPTG +S
Sbjct: 3 GKLNLQE---KLLSYFGFDSFKS--NQEAIIRTLLNGEDVFVLMPTGG---------GKS 48
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
P +++G ++ I+S ++ +I D I S TK
Sbjct: 49 LCYQLPS--LLMDG--------VAIIISPLIALMKNQVDAIRHTSEDDGIAHFINSSLTK 98
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +++R K KLLYV PE LQ + K+++ +DEAHC+SEWG
Sbjct: 99 GAIDQVKDDIRTGK--TKLLYVAPESLTKREQVEFLQSV----KISFYAIDEAHCISEWG 152
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR++ + G + PIIALTATA V+ DI L K FK+S R NL
Sbjct: 153 HDFRPEYRKIRPIIDEIGRA-PIIALTATATDKVRLDIKKNLGILNA-KEFKSSFNRPNL 210
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+Y+V KD + +I GK GIIYC +R+ +LA+ LR
Sbjct: 211 YYEV--RSKTKDIDKDIITYIHHNKGK------SGIIYCLSRKKVEELAEVLRANNIKAA 262
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ RS+ Q+ F+ I++I ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+
Sbjct: 263 AYHAGMDPQTRSQTQDDFLMESIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQET 322
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLE 403
GRAGRDG + C ++S K LE
Sbjct: 323 GRAGRDGGEGVCLAFYSPDDLKKLE 347
>gi|223997914|ref|XP_002288630.1| probable DNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975738|gb|EED94066.1| probable DNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 518
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 210/395 (53%), Gaps = 53/395 (13%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
++ D+FV MPTG G + + PG I ISP+LS
Sbjct: 1 MKGRDVFVLMPTGG----GKSLCYQLPAWCCPGLSVI-----------ISPLLSLI---- 41
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL--VKPRIKLLYVTPER-AVTES 179
+D+ +T + + + L + + E + I++ELR + IKLLY+TPE+ A +
Sbjct: 42 -EDQVQSMT-KLGVRSVFLNSAQSWEDEQRNIVDELRRTPIHGGIKLLYITPEKLAHSNM 99
Query: 180 FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAE 239
+L +L +++ VVDEAHC+S+WGHDFRP Y +LG LR+ N +P++ALTATA
Sbjct: 100 IKGVLSNLANNGRISRFVVDEAHCLSDWGHDFRPDYNQLGCLRRDYPN-VPLMALTATAN 158
Query: 240 PSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA 299
V D I L Y +++S R NL Y+V D + + ++I + +
Sbjct: 159 KKVVSDAIRALGMRNEYS-YRSSFNRPNLHYEVRRKD--NKTVDTIADYIAE------RR 209
Query: 300 NNCGIIYCRTREHTTDLADALRRKV-----------------NKHERSRVQESFMRGEIN 342
N+ G+IYC +R+ L+D L K+ ++ ER + ++ G I+
Sbjct: 210 NDSGVIYCLSRKDCETLSDKLNNKLREKGFRDVRVSYYHAELDQRERHQRHHAWSLGHIS 269
Query: 343 VITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSL 402
V+ ATI+FGMGID+ +VR+V+H+ MP SI YYQESGRAGRDG + C ++++ KK+L
Sbjct: 270 VLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQESGRAGRDGGNADCILFYAYKDKKTL 329
Query: 403 EYVI-KTDTSTKREQLELKFKNYL-SMLEYCEQGY 435
E +I K +R Q L+ ++L + L YCE +
Sbjct: 330 EMMIRKAAGHNQRSQATLRKIDHLYTCLRYCENTF 364
>gi|29347258|ref|NP_810761.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339157|gb|AAO76955.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
Length = 620
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 211/414 (50%), Gaps = 56/414 (13%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K + + LK+ FG+DSF+ LQ++ IRH LL D V MPTG G + +
Sbjct: 14 KFKQMLMKETLKSYFGYDSFR-PLQEEIIRH-LLNKQDSLVLMPTGG----GKSICYQLP 67
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + +SP++S K + T +++ + S +T
Sbjct: 68 ALLSEGTAVV-----------VSPLISLM-------KDQVETLQANGIAAGALNSSNDET 109
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EN + ++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGH
Sbjct: 110 ENANLRRAC--IEGRLKLLYISPEKLIAEK-----DYLLRDMSISLFAIDEAHCISQWGH 162
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y ++G L +QF +PIIALTATA+ ++DII L +P + F +S R N+
Sbjct: 163 DFRPEYTQMGMLHQQFP--QVPIIALTATADKITREDIIRQLHLIQP-RTFISSFDRPNI 219
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
DV K+ + EFI + GIIYC +R T +A L+++
Sbjct: 220 SLDVKRGFQAKEKNKAILEFIHR------HREESGIIYCMSRNKTETVAQMLQKQGIRCG 273
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE
Sbjct: 274 VYHAGLSPQHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEI 333
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDGL S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 334 GRAGRDGLPSDTVLFYSLG-----DLILLTKFATESNQQTINLEKLQRMQQYAE 382
>gi|154706411|ref|YP_001424942.1| ATP-dependent DNA helicase [Coxiella burnetii Dugway 5J108-111]
gi|154355697|gb|ABS77159.1| ATP-dependent DNA helicase [Coxiella burnetii Dugway 5J108-111]
Length = 601
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 137/397 (34%), Positives = 204/397 (51%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+++F+ LQ+K I ++ D FV MPTG + + A R G +
Sbjct: 9 LRQTFGYENFR-PLQEKIINSVIA-GEDNFVLMPTGGGKSLCYQIPALVR----EGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S D+ + + T TE +A R
Sbjct: 63 -----------VSPLIS-----LMQDQVQALNANGAAAA----LYNSTLTEAEARKNLAR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLY+ PER +TESF L+ + KLA + +DEAHCVS+WGHDFRP Y RLG
Sbjct: 103 LHNNELDLLYIAPERLMTESFLSRLREV----KLALVAIDEAHCVSQWGHDFRPEYLRLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR++ +P ALTATA+ +QDI+ L+ K V S R N+ Y ++ +
Sbjct: 159 ELREYFP-KVPFNALTATADKQTRQDILQRLRLTKA-NVHIASFNRPNIHYTLLEK---Q 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
Y + F+ KD KA+ GI+YC +R ++A L+ + +R
Sbjct: 214 KPYNQLVNFL-----KDRKAD-FGIVYCLSRNRVEEVAAKLQADRYSALPYHAGLPAAQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE+F R ++N+I ATI+FGMGID+ NVRFVVH+ +P I YYQE+GRAGRDGL S
Sbjct: 268 GKTQEAFQRDDVNIIVATIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + ++ I+ + R+++EL N +S
Sbjct: 328 ALLLYGLRDIAVIKSFIENGNNEIRKRIELHKLNCMS 364
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 205/406 (50%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVRIPPGADFI 99
FG F+ Q +AI LL D F+ MPTG + + VSA + I P I
Sbjct: 391 FGLHCFRTN-QLEAINAALL-GEDCFILMPTGGGKSLCYQLPACVSAGVTIVISPLRSLI 448
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + L+ D + +TG +T + I +L
Sbjct: 449 IDQVQK--------------LKTLDIAATYLTG------------DRTDADASKIYMQLS 482
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 483 KKDPVIKLLYVTPEKVCASNRLMSTLENLYDRKLLARFVIDEAHCVSQWGHDFRQDYKRL 542
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ G S+P++ALTATA P V++DI++ L+ KP +VF S R NL YDV+
Sbjct: 543 NMLRRKFG-SVPMMALTATANPRVQKDILNQLEMLKP-QVFTMSFNRHNLKYDVLPKKPK 600
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K + + E+I+K D+ GIIYC +R H D A+ +K +
Sbjct: 601 KVALDCL-EWIKKYHPHDS-----GIIYCLSR-HECDTTAAILQKEGLAALAYHAGLTDS 653
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ+ ++ E VI ATI+FGMGID+ +VR+V+H +P SI YYQESGRAGRDG
Sbjct: 654 NRDLVQQKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGE 713
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 714 MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 759
>gi|78187521|ref|YP_375564.1| ATP-requiring DNA helicase RecQ [Chlorobium luteolum DSM 273]
gi|78167423|gb|ABB24521.1| ATP-dependent DNA helicase RecQ [Chlorobium luteolum DSM 273]
Length = 615
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 200/387 (51%), Gaps = 51/387 (13%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++S++ + L+ +FGF +F+ Q++ +R IL D+F MPTG G + +
Sbjct: 4 QISDEAVHEALQRVFGFQAFRPN-QREVVRAIL-EGRDVFAVMPTGG----GKSLCYQLP 57
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ PG + +SP+++ K + R++ + + S Q
Sbjct: 58 AVLLPGTCIV-----------VSPLIALM-------KDQVDGARANGIRAAFLNSSQLPE 99
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + + L+ ++LLYV PER +SF +L+ + +++ V+DEAHC+SEWGH
Sbjct: 100 ERQMVANALQ--SGELELLYVAPERFAVDSFRAMLRGI----RISMAVIDEAHCISEWGH 153
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y L L G + P+ A TATA V+ D + L P+ V + S R NL
Sbjct: 154 DFRPDYLSLSALVDLAGMA-PVAAFTATATERVQADTLLRLALRDPFLV-RASFDRPNLS 211
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V+F D + + + + GK GIIY +R+ D A LR K
Sbjct: 212 YEVLFKD---SADRQILSILRRFSGK------AGIIYRASRKSVNDTAAMLRAKGFRALP 262
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ ER + Q +F+R E++VI AT++FGMGID+ N+RFV+H +P SI YYQE+G
Sbjct: 263 YHAGLDDREREQNQNAFIRDEVDVIIATVAFGMGIDKSNIRFVIHADLPKSIENYYQETG 322
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVI 406
RAGRDG ++C + +S+ + + I
Sbjct: 323 RAGRDGEPAHCTLLYSQGDIAKVRFFI 349
>gi|298387431|ref|ZP_06996983.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
gi|298259638|gb|EFI02510.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_14]
Length = 601
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 208/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK+ FG+DSF+ LQ++ IRH LL D V MPTG G + + + G +
Sbjct: 5 LKSYFGYDSFR-PLQEEIIRH-LLNKQDSLVLMPTGG----GKSICYQLPALLSEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T +++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVETLQANGIAAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGRLKLLYISPEKLIAEK-----DYLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L +P + F +S R N+ DV
Sbjct: 154 MLHQQFP--QVPIIALTATADKITREDIIRQLHLIQP-RTFISSFDRPNISLDVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + GIIYC +R T +A L+++ ++
Sbjct: 211 KEKNKAILEFIHR------HREESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSPQH 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTVLFYSLG-----DLILLTKFATESNQQTINLEKLQRMQQYAE 363
>gi|409911451|ref|YP_006889916.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
gi|298505021|gb|ADI83744.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens KN400]
Length = 603
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 218/430 (50%), Gaps = 62/430 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
E A L+ +FG+ SF+ Q++ + + R D FV MPTG G + + +
Sbjct: 3 HETLAVLRTVFGYRSFR-PFQEEIVDRVA-RGGDTFVLMPTGG----GKSLCYQIPSLVR 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S K + R + S + E++
Sbjct: 57 PGVGIV-----------ISPLISLM-------KDQVDALRENGVAAACYNSTLGERESRQ 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L RL + LLYV PER +T++F L+ + +A +DEAHCVS+WGHDFRP
Sbjct: 99 VLA--RLHGGELDLLYVAPERLMTDAFLERLREI----PIALFAIDEAHCVSQWGHDFRP 152
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y LG LR ++P+IALTATA+ + DI++ L + ++F T R N+ Y V+
Sbjct: 153 EYVELGRLRGLF-PTVPMIALTATADAQTRGDIVTRLGL-RDAEMFVTGFDRPNIRYSVL 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ + ++EF+ + GI+YC +R+ ++A+ LR
Sbjct: 211 EK---QKPFRQLEEFLA------TRPREAGIVYCLSRKRVEEVAEKLRAAGVEAAAYHAG 261
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ ERSRVQE+F+R +I V+ AT++FGMGID+ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 262 LADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVVHYDLPKNIESYYQETGRAGR 321
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------G 434
DGL + + +I++ + ++ ++EL N +M+ + E G
Sbjct: 322 DGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKLN--AMVGFAEALVCRRRALLG 379
Query: 435 YFLVILVFPC 444
YF L PC
Sbjct: 380 YFGERLEEPC 389
>gi|189462225|ref|ZP_03011010.1| hypothetical protein BACCOP_02908 [Bacteroides coprocola DSM 17136]
gi|189431078|gb|EDV00063.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 727
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 206/401 (51%), Gaps = 69/401 (17%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
L +LK FGFD+FK ++AI LL D FV MPTG + S++ + +
Sbjct: 7 LAEQLKKYFGFDTFKG--NQEAIISNLLAGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS K++I +SD I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSLT------KSAIDQVKSD------ILAGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+H+ K+++ +DEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVDFLKHV----KISFYAIDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P VK DI L + FK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVKMDIQKNLGMVGATE-FKSSFNRP 208
Query: 267 NLFYDV--IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
NL+Y+V +++ KD +K+ EK GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEVRPKTNNVDKDIIRFIKQNPEKS----------GIIYCLSRKKVEELAEILQANG 258
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ R+ Q++F++ +I VI ATI+FGMGID+ +VRFV+H+ +P S+ Y
Sbjct: 259 IKARPYHAGMDSATRNANQDAFLKEDIEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGY 318
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YQE+GRAGRDG + C ++S + LE ++ +++E
Sbjct: 319 YQETGRAGRDGGEGMCITFYSNKDLQKLEKFMQGKPISEQE 359
>gi|75908908|ref|YP_323204.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
gi|75702633|gb|ABA22309.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
Length = 718
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 214/412 (51%), Gaps = 59/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LEQALKYHFGYDNFRP--GQRQIIEDALQNRDLMVVMPTGG----GKSLCFQLPALMKQG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ +SP+++ LR + + + + YQ+ ++
Sbjct: 61 LTVV-----------VSPLIALMQDQVEALRNNNISATFLNSSLNAYQV--------RSR 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+AIL +++LLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 102 EEAIL------NGKVRLLYVAPERLLSERFLPFLDLVNEKVGISIFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L LR+ N +P++ALTATA V+ DII L +P + S R NL+Y
Sbjct: 156 FRPEYRQLKSLRKRYPN-VPVLALTATATDRVRSDIIQQLGLKQP-SIHLASFNRQNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K +YA + E I +DN+ + IIYC TR+ +L L++
Sbjct: 214 EVRPKS--KQAYAELLELI-----RDNEGS--AIIYCLTRKKVEELTFKLQKDKISALSY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ERS+ Q F+R ++ V+ ATI+FGMGI++ +VR VVH+ +P ++ +YYQESGR
Sbjct: 265 HAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG S C I+ S K++E+ I+ T + EQL K + M++Y E
Sbjct: 325 AGRDGEPSRCTIFFSFGDIKTIEWSIEQKTDPQ-EQLIAK-QQLRQMIDYAE 374
>gi|160890574|ref|ZP_02071577.1| hypothetical protein BACUNI_03017 [Bacteroides uniformis ATCC 8492]
gi|317479884|ref|ZP_07939001.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|423304003|ref|ZP_17282002.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423307273|ref|ZP_17285263.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|156859573|gb|EDO53004.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
gi|316903958|gb|EFV25795.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|392685931|gb|EIY79239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392690525|gb|EIY83788.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 727
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/399 (34%), Positives = 205/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
L +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LIDQLKKYFGFDTFKG--NQEAIIENLLAGNDTFVLMPTGGGKSLCYQLPSLLMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K++I RSD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKSAIDQVRSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T KLLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 T------------------KLLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRP 209
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A+V I K + N GIIYC +R+ +LA+ L+
Sbjct: 210 NLYYEV------RPKTANVDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 261
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQ
Sbjct: 262 ARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 322 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|380696494|ref|ZP_09861353.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
Length = 601
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 207/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRH+L D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHVL-NKQDALVLMPTGG----GKSICYQLPALLSEGTTVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T +++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVETLQANGIAAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -VEGRLKLLYISPEKLIAEK-----DYLLRDMSISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPIIALTATA+ ++DII L +P + F +S R N+ DV
Sbjct: 154 MLHQQFP--QIPIIALTATADKITREDIIRQLHLVQP-RTFISSFDRPNISLDVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + GIIYC +R T +A L+++ ++
Sbjct: 211 KEKNKAILEFIHR------HREESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSSQH 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGI++ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQNDFINDRIQVVCATIAFGMGINKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLSS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTVLFYSLG-----DLILLTKFATESSQQTINLEKLQRMQQYAE 363
>gi|150866421|ref|XP_001386017.2| ATP-dependent DNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149387677|gb|ABN67988.2| ATP-dependent DNA helicase, partial [Scheffersomyces stipitis CBS
6054]
Length = 1148
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 214/409 (52%), Gaps = 42/409 (10%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ + L ++F SF+ Q +A+ L++ D+FV MPTG +S P
Sbjct: 456 EVYSVLNSVFKLQSFRSN-QLEAV-CASLQSKDVFVLMPTGG---------GKSLCYQLP 504
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
+ G ISP++S D+ + ++ + +I S T ENK
Sbjct: 505 A--LVKGGKTNGTTVVISPLIS-----LMQDQVQHLLDKN--VKAGMISSKATAEENKQT 555
Query: 155 LEELRLVKPRIKLLYVTPERAVTESF-HYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ R + + L+Y++PE+A T + ++ L N+LA +V+DEAHC+S WGHDFRP
Sbjct: 556 MHLFR--EGFLDLVYLSPEKANTSNVVQKIISKLYETNRLARVVIDEAHCLSSWGHDFRP 613
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y+ +G ++ N +PI+ALTATA V+ DI+ LK + K S R+NL+Y++
Sbjct: 614 DYQSMGLFKERYPN-VPIMALTATANEKVRLDIVHNLKMENAV-LLKQSFNRTNLYYEI- 670
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------K 323
K A+ E+I+ + K N+ N GIIYC +++ + L
Sbjct: 671 -----KWKAANYVEWIKDYILK-NQNNKTGIIYCHSKQSCEQTSAKLNSFGLHTAFYHAG 724
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R +Q + G I +I ATI+FGMGID+ +VR+V+H +P S+ YYQE+GRAGR
Sbjct: 725 MSPQDRFDIQSQWQTGRIQLICATIAFGMGIDKPDVRYVIHLFIPRSLEGYYQETGRAGR 784
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG QS C +++S +SL+ +I+ D +E E +++YCE
Sbjct: 785 DGKQSDCIMFYSYKDARSLQSMIQRDEELTKEGKENHLAKLRQVVQYCE 833
>gi|374385551|ref|ZP_09643054.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
gi|373225253|gb|EHP47587.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
Length = 735
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 204/381 (53%), Gaps = 48/381 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L KLK FGFD+FK Q+ IR++L + FV MPTG +S
Sbjct: 15 EIDLHEKLKEYFGFDNFKGN-QEAIIRNVL-AGKNTFVLMPTGG---------GKSLCYQ 63
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
P IL+G ISP+++ ++ + D + + + S TK E
Sbjct: 64 LPA--LILDGTAIV----ISPLIA--LMKNQVDAMRSFSAAEGVAHF--LNSSLTKNEIL 113
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E++ ++ + KLLYV PE +S L+ + K+++ VDEAHC+SEWGHDFR
Sbjct: 114 KVKEDI--LEGKTKLLYVAPESLTKDSNVEFLKKI----KISFFAVDEAHCISEWGHDFR 167
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
YR++ + + G + PIIALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 168 TEYRKIRPIVEQIGKA-PIIALTATATPKVQHDIQKNLDMLDA-EVFKSSFNRPNLYYEV 225
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RR 322
+ D + +FI+K GK GIIYC +R+ +LA+ L
Sbjct: 226 RPKN---DPTKDIIKFIKKHEGK------SGIIYCLSRKKVEELAEVLCINGIKAAPYHA 276
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ RS Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAG
Sbjct: 277 GMDATTRSANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 336
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + C Y+S + LE
Sbjct: 337 RDGGEGICITYYSYKDIQKLE 357
>gi|294055968|ref|YP_003549626.1| RecQ family ATP-dependent DNA helicase [Coraliomargarita
akajimensis DSM 45221]
gi|293615301|gb|ADE55456.1| ATP-dependent DNA helicase, RecQ family [Coraliomargarita
akajimensis DSM 45221]
Length = 709
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 203/414 (49%), Gaps = 60/414 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG F+ ++AI +L D V MPTG G + + + PG +
Sbjct: 7 LQTHFGLTEFR--EPQRAIVESVLAGKDTLVVMPTGG----GKSLCYQLPALLLPGVTLV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ K + + ++ L+ S Q+ E +A LE +R
Sbjct: 61 -----------VSPLIALM-------KDQVDSLQAKGLPAGLLNSSQSLDEQRASLEAIR 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++K++YV PER ++SF L ++ + +DEAHC+S+WGHDFRP Y+RLG
Sbjct: 103 --QGKLKMVYVAPERFRSQSFIRALP----AEAISLLAIDEAHCLSQWGHDFRPDYKRLG 156
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
++R G S P +ALTATA P V+ DI L P + F R NL + V +
Sbjct: 157 DVRTALG-SPPCVALTATATPDVQADICDTLAMQSPTE-FVAGFARDNLSFKVRKTNSDA 214
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHER 329
D V+ I + + GI+YC TR+ +A + ++ ER
Sbjct: 215 DKLEAVERLIRR--------HKTGIVYCATRKSVEAVAAKMEPFAAPLIRYHGGMSDQER 266
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
S Q+ FM G +V+ AT +FGMGIDR ++RFV H+ MP S+ AYYQE GRAGRDG +
Sbjct: 267 STAQDVFMSGRASVVVATNAFGMGIDRPDIRFVCHYEMPGSVEAYYQEGGRAGRDGKPAS 326
Query: 390 CRIYHSEHSKKSLEYVIKTD-------TSTKREQLELKFKNY---LSMLEYCEQ 433
C + S K+ E+ I+ T T + EL N+ LSM + CEQ
Sbjct: 327 CEMLFSYADKRVQEFFIEGANPGLPLITETFDQLKELADANHEVRLSMDDLCEQ 380
>gi|212556507|gb|ACJ28961.1| ATP-dependent DNA helicase RecQ [Shewanella piezotolerans WP3]
Length = 607
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 220/403 (54%), Gaps = 54/403 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L+A L+++FG+ +F+ + Q++ I I D V MPTG G + + P
Sbjct: 12 QLSASLQSVFGYRTFR-DGQREVIEQICA-GQDCLVIMPTGG----GKSLCYQLPALQLP 65
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKA 153
G + +SP++S +D S++ TG S Y + S Q + E+
Sbjct: 66 GLTVV-----------VSPLIS----LMKDQVDSLIQTGVSAAY----LNSSQPREESLK 106
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
IL+++R + +KLLYV+PER + SF L L ++ +DEAHC+S+WGHDFRP
Sbjct: 107 ILQQMRYGE--LKLLYVSPERLLQASFIDRLHEL----NISLFAIDEAHCISQWGHDFRP 160
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y LG LRQ +PI+ALTATA+ + + DI L +P+ + TS R N+ Y V
Sbjct: 161 EYAALGRLRQ-QFPLVPIMALTATADNATRVDICERLTI-EPFSLL-TSFDRPNIRYTVA 217
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK------- 326
+ L ++ +++FI D + N GI+YC +R ++A+ LR + ++
Sbjct: 218 -EKL--NAANQLRQFI------DAQNGNSGIVYCSSRRRVDEVAERLRMQGHQAEAYHAG 268
Query: 327 ---HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
ER+ VQ+ F++ +++++ AT++FGMGI++ NVR+VVH+ +P S+ AYYQE+GRAGR
Sbjct: 269 KTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKSVEAYYQETGRAGR 328
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
DGL S + + ++I+ ++Q+E N ++
Sbjct: 329 DGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/386 (33%), Positives = 200/386 (51%), Gaps = 50/386 (12%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
L D+FV MPTG + + A I +G R ISP++S
Sbjct: 753 LNGRDVFVLMPTGGGKSLCYQLPA-----------LISSGKTRGTTIVISPLIS-----L 796
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVT-ESFH 181
D+ + ++ + +I S + E K+ LE+ R ++L+Y++PE T +
Sbjct: 797 MQDQVQHLLHKN--IRAGMISSKGSAAERKSTLEQFR--NGELQLVYLSPEMVNTSQHIQ 852
Query: 182 YLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPS 241
++ L +LA +VVDEAHCVS WGHDFRP Y+ + +Q +P+IALTATA
Sbjct: 853 RIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQ-QFPQVPVIALTATANEK 911
Query: 242 VKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKD 296
V+ DI+ L+ + P + K S R+NLFY++ F D ++D Y K+
Sbjct: 912 VRMDIVHHLQMSDPV-LLKQSFNRTNLFYEIKWKAANFLDWIRD-YILTKQ--------- 960
Query: 297 NKANNCGIIYCRTREHTTDLADALRR----------KVNKHERSRVQESFMRGEINVITA 346
N GIIYC +++ AD L + ++ ER ++Q + + I VI A
Sbjct: 961 --QNKTGIIYCHSKQSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQTDWQQNRIQVICA 1018
Query: 347 TISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVI 406
TI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDGL S C +++S +SL+ +I
Sbjct: 1019 TIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSYKDARSLQNMI 1078
Query: 407 KTDTSTKREQLELKFKNYLSMLEYCE 432
+ D+ RE E +++YCE
Sbjct: 1079 QRDSELDREGKESHLAKLRQVVQYCE 1104
>gi|17227701|ref|NP_484249.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
gi|17135183|dbj|BAB77729.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
Length = 718
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 214/412 (51%), Gaps = 59/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LEQALKYHFGYDNFRP--GQRQIIEDALQNRDLMVVMPTGG----GKSLCFQLPALMKQG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ +SP+++ LR + + + + YQ+ ++
Sbjct: 61 LTVV-----------VSPLIALMQDQVEALRNNNISATFLNSSLNAYQV--------RSR 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+AIL +++LLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 102 EEAIL------NGKVRLLYVAPERLLSERFLPFLDLVKEKVGISIFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L LR+ N +P++ALTATA V+ DII L +P + S R NL+Y
Sbjct: 156 FRPEYRQLKSLRKRYPN-VPVLALTATATDRVRADIIQQLGLKQP-SIHLASFNRQNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K +YA + E I +DN+ + IIYC TR+ +L L++
Sbjct: 214 EVRPKS--KQAYAELLELI-----RDNEGST--IIYCLTRKKVEELTFKLQKDKISALSY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ERS+ Q F+R ++ V+ ATI+FGMGI++ +VR VVH+ +P ++ +YYQESGR
Sbjct: 265 HAGLPDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG S C I+ S K++E+ I+ T + EQL K + M++Y E
Sbjct: 325 AGRDGEASRCTIFFSFGDIKTIEWSIEQKTDPQ-EQLIAK-QQLRQMIDYAE 374
>gi|39996003|ref|NP_951954.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
gi|39982768|gb|AAR34227.1| ATP-dependent DNA helicase RecQ [Geobacter sulfurreducens PCA]
Length = 603
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/430 (32%), Positives = 218/430 (50%), Gaps = 62/430 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
E A L+ +FG+ SF+ Q++ + + R D FV MPTG G + + +
Sbjct: 3 HETLAVLRTVFGYRSFR-PFQEEIVDRVA-RGGDTFVLMPTGG----GKSLCYQIPSLVR 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP++S K + R + S + E++
Sbjct: 57 PGVGIV-----------ISPLISLM-------KDQVDALRENGVAAACYNSTLGERESRR 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L RL + LLYV PER +T++F L+ + +A +DEAHCVS+WGHDFRP
Sbjct: 99 VLA--RLHGGELDLLYVAPERLMTDAFLERLREI----PIALFAIDEAHCVSQWGHDFRP 152
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y LG LR ++P+IALTATA+ + DI++ L + ++F T R N+ Y V+
Sbjct: 153 EYVELGRLRGLF-PTVPMIALTATADAQTRGDIVTRLGL-RDAEMFVTGFDRPNIRYSVL 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ + ++EF+ + GI+YC +R+ ++A+ LR
Sbjct: 211 EK---QKPFRQLEEFLA------TRPREAGIVYCLSRKRVEEVAEKLRAAGVEAGAYHAG 261
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ ERSRVQE+F+R +I V+ AT++FGMGID+ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 262 LADAERSRVQEAFLRDDIRVVVATVAFGMGIDKPNVRFVVHYDLPKNIESYYQETGRAGR 321
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------G 434
DGL + + +I++ + ++ ++EL N +M+ + E G
Sbjct: 322 DGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKLN--AMVGFAEALVCRRRALLG 379
Query: 435 YFLVILVFPC 444
YF L PC
Sbjct: 380 YFGERLEEPC 389
>gi|260913220|ref|ZP_05919702.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
gi|260632807|gb|EEX50976.1| ATP-dependent helicase RecQ [Pasteurella dagmatis ATCC 43325]
Length = 631
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 169/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT E + + +++ +KLLYV+PE+ +T SF +L+ H K+++I +DEAHC
Sbjct: 110 SSQTFAEQQNV--HSKVMSGTLKLLYVSPEKVMTNSFFHLISHC----KVSFIAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ N+ PI+ALTATA+ + +QDI+ LK +PY ++ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKHAFPNA-PIMALTATADHATRQDILVHLKLEQPY-IYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y +I + Y +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLI------EKYKPMEQLCRFVLGQKGKS---GIIYCNSRNKVERVAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R VQ +F R ++ V+ ATI+FGMGI++ NVRFV H+ +P SI +
Sbjct: 273 GVKAQAYHAGMETTQREDVQRAFQRDDLQVVVATIAFGMGINKSNVRFVAHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ T + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILFEKPETPQRQIE 377
>gi|226326677|ref|ZP_03802195.1| hypothetical protein PROPEN_00530 [Proteus penneri ATCC 35198]
gi|225204898|gb|EEG87252.1| ATP-dependent DNA helicase RecQ [Proteus penneri ATCC 35198]
Length = 600
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 214/416 (51%), Gaps = 53/416 (12%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
A L+ FG+ F+ Q+ + H + D V MPTG + + A
Sbjct: 6 AILRETFGYQQFRPGQQE--VIHTITTGRDCLVVMPTGGGKSLCYQIPA----------- 52
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
+L+G ++ ++S +D + L+ +E T+T + + +
Sbjct: 53 LLLDG--------LTVVVSPLISLMKDQVDQLC-----LHGIEAAYLNSTQTREEQLDVQ 99
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+R K IKLLY+ PER + ESF L LV++ K + VDEAHC+S+WGHDFRP YR
Sbjct: 100 IRCQKGEIKLLYIAPERLMMESF---LHQLVQW-KPVLLAVDEAHCISQWGHDFRPEYRG 155
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDD 276
+G LRQ+ + +PIIALTATA+ + + DII+ L P + S+F R N+ Y ++
Sbjct: 156 IGLLRQYIAD-VPIIALTATADNTTRYDIINQLVLRDP--LIHISSFDRPNIRYTLV--- 209
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
+ Y + + G+ K+ GIIYC +R + A+ L ++ +
Sbjct: 210 ---EKYKPLDQLWLFIRGQKGKS---GIIYCNSRSKVEETAERLSKRGLSIAGYHAGMEI 263
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R++VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 264 AQRAKVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGL 323
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L + + ++ +E+ N + + LV+L +
Sbjct: 324 PAEAVLFYDPADMAWLRRCLDEKPESDQKAIEMHKLNAMGAFAEAQTCRRLVLLNY 379
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 210/409 (51%), Gaps = 45/409 (11%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+T L FG SF+ Q + I LL +D FV MPTG G + + + G
Sbjct: 685 MTQALSYSFGLKSFRPN-QLQVINAALL-GNDCFVLMPTGG----GKSLCYQLPAILTEG 738
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG-QTKTENKAI 154
+ ISP+ S + + + + +S +SG Q+ ++ I
Sbjct: 739 VTIV-----------ISPLKSLIFDQVNKLASLDICAKS--------MSGEQSMSDAMTI 779
Query: 155 LEELRLVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+L P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP
Sbjct: 780 YRDLESHPPLVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRP 839
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y++LG LR+ N +P +ALTATA P V+ DI+S L + K F +S RSNL Y V
Sbjct: 840 DYKKLGILRKRFPN-VPTMALTATATPRVRLDILSQLNLTQ-CKWFLSSFNRSNLRYKV- 896
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----RRKVNKH-- 327
L A E I + K AN+ GIIYC +R+ D++ + R V H
Sbjct: 897 ----LPKKGASTLEDISAFI-KSRPANSSGIIYCLSRKECDDVSQKMCKAGIRSVAYHAG 951
Query: 328 ----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
ER Q+ ++ ++ VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGR
Sbjct: 952 LSDTERESRQKDWILSKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGR 1011
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG + C +Y++ L+ ++ D + ++ N ++ YCE
Sbjct: 1012 DGDIAECILYYNYSDMLRLKKMLDGDRALNYNVKKMHIDNLYRIVGYCE 1060
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 206/413 (49%), Gaps = 61/413 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ ++ I L D+ + MPTG G + + + PG
Sbjct: 7 LEQALKHYFGYDNFRPG--QRQIVEEALEKRDLLILMPTGG----GKSLCFQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPIL-SSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
+++ + + +L + F + RS
Sbjct: 61 LTVVVSPLISLMQDQVEALLDNGIGATFLNSTVDWADVRS-------------------- 100
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
E+ ++ +IK+LYV PER +T+ F L+ + R ++ +DEAHCVS+WGHDFRP
Sbjct: 101 -REVGILNGKIKILYVAPERLLTDKFTLFLEQVQRQVGISAFAIDEAHCVSQWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L +LRQ +PI ALTATA V++DII L +P + +S R NL+Y+V
Sbjct: 160 YRQLKQLRQ-RYRDVPIFALTATATNRVREDIIQQLALRQP-SIHISSFNRPNLYYEVQL 217
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
K +Y + + I + G GI+YC +R H ++A L++ +
Sbjct: 218 KQ--KQAYLQLLKLIRQYEG-------SGIVYCLSRRHVDEVAFRLQKDGISALPYHAGM 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ER+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGRD
Sbjct: 269 TDEERAYNQTRFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTK-----REQLELKFKNYLSMLEYCE 432
G + C + +++ Y+I+ + + R+QL+ M++Y E
Sbjct: 329 GEPARCTLLFGTGDLRTINYLIEQKSDAQEQRVARQQLQ-------KMIDYAE 374
>gi|399026913|ref|ZP_10728551.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398075677|gb|EJL66783.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 731
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 204/382 (53%), Gaps = 47/382 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E E+ +LK FGF FK LQ++ I IL + FV MPTG G + +
Sbjct: 4 NEIEIHKELKKYFGFSQFKG-LQEQVITSIL-NKKNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G + +SP+++ ++ +I + S+ ++ S TKTE
Sbjct: 58 IQDGTAIV-----------VSPLIA----LMKNQVDAIRSLSSENGIAHVLNSSLTKTEI 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++ KLLYV PE E + LQ + ++++ +DEAHC+SEWGHDF
Sbjct: 103 AQVKKDI--TSGLTKLLYVAPESLTKEEYVAFLQSV----PISFVAIDEAHCISEWGHDF 156
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR L + + G S+PII LTATA P V++DI+ L + FK S R NL+Y+
Sbjct: 157 RPEYRNLKNIIKQLG-SVPIIGLTATATPKVQEDILKNLDMSDA-NTFKASFNRPNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K+ + + FI++ GK GIIYC +R+ +A+ L+
Sbjct: 215 V--RTKTKNIESDIIRFIKQHKGK------SGIIYCLSRKKVETIAEVLQVNGISAVPYH 266
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRA
Sbjct: 267 AGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRA 326
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + +C Y+S + LE
Sbjct: 327 GRDGGEGHCLAYYSYKDVEKLE 348
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/376 (35%), Positives = 198/376 (52%), Gaps = 55/376 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ E + LK FG+DSF+ LQ++ I IL +D V MPTG G + +
Sbjct: 2 IEETTILNTLKEYFGYDSFR-PLQREIIDTIL-NGNDCLVIMPTGG----GKSICYQLPA 55
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKT 149
+ G + ISP+++ +D + V G + + S Q+
Sbjct: 56 LLQDGLTIV-----------ISPLIA----LMKDQVDGLNVNGIPACF----LNSSQSTA 96
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E + I ++ K IKLLYV PE S YL +++ K++ I VDEAHC+S WGH
Sbjct: 97 EQEVIFNDIEAKK--IKLLYVAPE-----SLSYL-ENIFSSTKISLIAVDEAHCISSWGH 148
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y +LG L+ N+ P+IALTATA+ + ++DI + L + K F S R NL
Sbjct: 149 DFRPAYTQLGFLKNRFPNT-PLIALTATADKATREDIANQLNISNAKK-FVASFDRKNLS 206
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
+V D + +F+ K + N GI+YC +R+ T +A+ L++
Sbjct: 207 LEVRPG---TDRIKQIIQFLNK------RPNESGIVYCLSRKTTESIAEKLQQAGYNAEA 257
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
VN RS+VQE F+ + ++ AT++FGMGID+ NVR+V+H+ +P +I YYQE G
Sbjct: 258 YHAGVNHDGRSKVQEDFINDKTQIVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIG 317
Query: 380 RAGRDGLQSYCRIYHS 395
RAGRDGL SY ++HS
Sbjct: 318 RAGRDGLPSYTLLFHS 333
>gi|338212508|ref|YP_004656563.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
gi|336306329|gb|AEI49431.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
Length = 746
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 211/396 (53%), Gaps = 59/396 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK +FG+ F+ E ++AI + ++ ++ FV MPTGA G + + G
Sbjct: 12 LKERLKEIFGYSQFRGE--QEAIINSIMGGNNTFVIMPTGA----GKSLCYQLPAITTEG 65
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI-VSGQ--TKTENK 152
+ ISP+++ ++ + QL ++ Q T NK
Sbjct: 66 IAIV-----------ISPLIALM--------------KNQVDQLNAFGINAQFLNSTLNK 100
Query: 153 AILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
A + +++ + +KLLY+ PE E L L R N ++++ VDEAHC+SEWGHD
Sbjct: 101 AEINKVKKDALDGTLKLLYIAPESLTKEEN---LDFLQRAN-ISFVAVDEAHCISEWGHD 156
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YRR+ + +P+IALTATA P V+QDI+ L+ + +FKTS R NL+Y
Sbjct: 157 FRPEYRRIRGIIDNINPDLPLIALTATATPKVQQDIVKNLRMEEA-AMFKTSFNRKNLYY 215
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
++ + A V + + K + K+NK + GIIYC +R+ ++A+ L
Sbjct: 216 EI------RPKLADVNKQLIKYI-KNNKGKS-GIIYCLSRKTVEEVANLLNVNDVKALPY 267
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ R Q++F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ YYQE+GR
Sbjct: 268 HAGLDSSTRMHNQDAFLNEEADVIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGR 327
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
AGRDGL+ C +++ + LE K + T+R+
Sbjct: 328 AGRDGLEGNCVMFYCIDDIQKLEKFNKDKSVTERDN 363
>gi|209527293|ref|ZP_03275803.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
gi|209492281|gb|EDZ92626.1| ATP-dependent DNA helicase RecQ [Arthrospira maxima CS-328]
Length = 739
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 202/393 (51%), Gaps = 48/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+DSF+ Q++ I + L+ D+ MPTG G + + +
Sbjct: 12 QSLQQCLKQYFGYDSFRPG-QQEIIEQV-LQKRDVLAIMPTGG----GKSLCFQLPALLK 65
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ D+ + + T ++A
Sbjct: 66 PGLTLV-----------VSPLIA-----LMQDQVEALKDNG----IGATFLNSTVDIHEA 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E +++ +IKLLYV PER ++ F L L ++ +V+DEAHCVS+WGHDFRP
Sbjct: 106 RQRESAILQGQIKLLYVAPERLLSPQFLEFLDRLEAAFGISTLVIDEAHCVSDWGHDFRP 165
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++R + +P IALTATA V+ DII + +PY V S +RSNL+Y VI
Sbjct: 166 EYRQIQQVRSRYPH-VPAIALTATATERVRFDIIKQIVLKQPY-VHVASFYRSNLYYQVI 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + + IE G GIIYC +R+ ++A L+
Sbjct: 224 PKQ-PKKRFPQLLKVIESMSGS-------GIIYCSSRKRVEEVALKLQHNNIPALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R F+R ++ +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAGR
Sbjct: 276 MADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG + C ++ S K++EY+I K D +R
Sbjct: 336 DGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQR 368
>gi|294672822|ref|YP_003573438.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473845|gb|ADE83234.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 722
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 203/378 (53%), Gaps = 63/378 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LTA LK FGFD+FK + Q++ I++ L+ +D FV MPTG G + + + G
Sbjct: 3 LTAALKKYFGFDTFKGD-QERIIQN-LMDGNDTFVLMPTGG----GKSLCYQLPSLLMEG 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ ++ ++T S + E + NKA +
Sbjct: 57 TAIV-----------ISPLIA-----LMKNQVDVITSMS---ETEGTAHYLNSSLNKAAI 97
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ +DEAHC+SEWGHDFRP
Sbjct: 98 DQVKSDVMAGRTKLLYVAPESLTKEENVEFLRSV----KISFYAIDEAHCISEWGHDFRP 153
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV- 272
YR++ + G + PIIALTATA V+ DI L + FK+S R NL+Y+V
Sbjct: 154 EYRKIRPIVNEIGKA-PIIALTATATDKVRTDIKKNLGIVDAAE-FKSSFNRPNLYYEVR 211
Query: 273 -----IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
+ D++K FI++ GK GIIYC +R+ +LA+ LR
Sbjct: 212 PKTANVDKDIIK--------FIKQHPGK------SGIIYCLSRKKVEELAEILRVNGIKA 257
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ + RS Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE
Sbjct: 258 AAYHAGLDSNTRSNTQDEFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQE 317
Query: 378 SGRAGRDGLQSYCRIYHS 395
+GRAGRDG + C ++S
Sbjct: 318 TGRAGRDGGEGICLAFYS 335
>gi|329960081|ref|ZP_08298545.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328533033|gb|EGF59806.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 603
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 212/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRH+L R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHLLARK-DALVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D S+V L S +T N A+
Sbjct: 59 -----------VSPLIS----LMKDQVESLVANGIAAGALN---SNNDETANAALRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -TEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L +P K+F +S R NL V
Sbjct: 154 ILHQQFP--HVPIIALTATADKITREDIIKQLHLEQP-KIFISSFDRPNLSLAVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ G+IYC +R T +A L+++ ++ +
Sbjct: 211 KEKSKAILDFIGRHPGES------GVIYCMSRSKTESVAQMLQKQGIKAAVYHAGLSADK 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDRAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTLLFYS-----LADLILLTKFATESGQQSINIEKLQRMQQYAE 363
>gi|189463687|ref|ZP_03012472.1| hypothetical protein BACINT_00018 [Bacteroides intestinalis DSM
17393]
gi|189438637|gb|EDV07622.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 727
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 207/405 (51%), Gaps = 77/405 (19%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LTDQLKKYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGGGKSLCYQLPSLMMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I +SD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVKSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 TK------------------LLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVQHDIQKNLGMVDA-EVFKSSFNRP 209
Query: 267 NLFYDV------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
NL+Y+V I D++K FI+ N + GIIYC +R+ +LA+ L
Sbjct: 210 NLYYEVRPKTNNIDRDIIK--------FIK------NNSEKSGIIYCLSRKKVEELAEIL 255
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ ++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S
Sbjct: 256 QANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKS 315
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 316 LEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|440680362|ref|YP_007155157.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
gi|428677481|gb|AFZ56247.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
Length = 724
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 212/411 (51%), Gaps = 55/411 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL KLK FG+D F+ ++ I L+ D+ V MPTG G + + + P
Sbjct: 6 ELEKKLKYHFGYDQFRP--GQRQIIEDALQNRDLMVVMPTGG----GKSLCFQLPALLKP 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLR---FRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
G + +SP+++ + R++ S S L S + ++
Sbjct: 60 GLTVV-----------VSPLIALMQDQVEALRNNNISATFLNSSLN------SYKVRSRE 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+AI+ +++LLYV PER V++ F LL + ++ +DEAHCVSEWGHDF
Sbjct: 103 EAIMNG------KVRLLYVAPERLVSDRFLPLLDVVKEKIGISTFAIDEAHCVSEWGHDF 156
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR+L LR+ + +P IALTATA V+ DII L +P + S R NL+Y+
Sbjct: 157 RPEYRQLKLLRKRYPD-VPTIALTATATDRVRADIIEQLGLKQP-SIHIASFNRQNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K +YA + E + + G GIIYC TR+ +L L++
Sbjct: 215 VRAKS--KRAYAEILEIVRENEG-------SGIIYCLTRKKVDELTFKLQKDKVAALPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ ERS+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H +P +I YYQESGRA
Sbjct: 266 AGLSDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRFVIHSDLPRNIEGYYQESGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRD S C ++ S K++E+ I T + EQL K + +++Y E
Sbjct: 326 GRDDEPSRCTLFFSFADVKTIEWSINQKTDPQ-EQLIAK-QQLRQVIDYAE 374
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 208/415 (50%), Gaps = 52/415 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QEL + FG +F+ Q +AI L+ D FV MPTG G + + +
Sbjct: 395 QELLKIFRLKFGLYTFRPN-QLQAINATLV-GFDCFVLMPTGG----GKSLCYQLPALLS 448
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
G + ISP+ K+ I+ L L++ + S T
Sbjct: 449 TGLTVV-----------ISPL-----------KSLILDQVQKLISLDIPAAQLSSSVTDK 486
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +A+ EL +P +K+LYVTPE+ + ++ F + L + L V+DEAHCVS+WG
Sbjct: 487 QAEAVYRELCKKEPALKILYVTPEKISASQKFCNTMTTLYERDLLTRFVIDEAHCVSQWG 546
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L LR+ +P +ALTATA P V+ DI+ L KP K F +S R NL
Sbjct: 547 HDFRPDYKKLKCLRK-NYPKVPTMALTATATPRVRTDILHQLDMTKP-KWFMSSFNRPNL 604
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK-- 326
Y +I K+ V I K N CGI+YC +R+ D A L++ K
Sbjct: 605 RYSII-SKKGKNCSDEVVAMI-----KTKFKNVCGIVYCLSRKDCEDYAAHLKKNCIKAL 658
Query: 327 --------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++R+ Q ++ EI+VI ATI+FGMGID+ NVR+V+H +P SI YYQES
Sbjct: 659 SYHAGLTDNQRNNCQGKWILDEIHVICATIAFGMGIDKPNVRYVIHAALPKSIEGYYQES 718
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
GRAGRDG + C ++++ + +I+ D S + + N M+ +CE
Sbjct: 719 GRAGRDGEIADCILFYNYADMHRIRKMIEMDNSNP-QVIRTHMDNLFKMVAFCEN 772
>gi|333381389|ref|ZP_08473071.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
gi|332830359|gb|EGK02987.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
Length = 731
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 204/395 (51%), Gaps = 55/395 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+LT LK FGFD FK ++AI LL D FV MPTG G + + +
Sbjct: 7 KLTVALKKHFGFDKFKG--NQEAIIQNLLDEKDTFVLMPTGG----GKSLCYQLPALLME 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G I ISP+++ + V + + + + + NKA
Sbjct: 61 GTAVI-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKAA 101
Query: 155 LEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+E+++ ++ + KLLYV PE E L+ + K+++ +DEAHC+SEWGHDFR
Sbjct: 102 IEQVKGDILSGKTKLLYVAPESLTKEENIDFLRQI----KISFYAIDEAHCISEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G PIIALTATA P V+ DI L VFK S R NLFY+V
Sbjct: 158 PEYRRIRPIVTEIGKH-PIIALTATATPKVQLDIQKNLGMVDA-DVFKASFNRENLFYEV 215
Query: 273 --IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+++ KD ++K ++ + GIIYC +R+ + A+ L+
Sbjct: 216 RSKTNNVDKDIIKYIK----------SQGHKSGIIYCLSRKKVEEFAEILQTNNINALPY 265
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ + RS Q++F+ +++VI ATI+FGMGID+ +VR+V+H+ MP S+ YYQE+GR
Sbjct: 266 HAGLDANTRSANQDAFLMEQVDVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGR 325
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
AGRDG + C ++S + LE ++ ++E
Sbjct: 326 AGRDGGEGKCIAFYSFKDLQKLEKFMQGKPVAEQE 360
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/405 (36%), Positives = 207/405 (51%), Gaps = 48/405 (11%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
LFG SF+ Q +AI LL D FV MPTG G + + + G +
Sbjct: 212 LFGLKSFR-RNQLQAINAALLGL-DCFVIMPTGG----GKSLCYQLPAAVQDGLTLV--- 262
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ-TKTENKAILEELRLV 161
ISP L + L VT L + ++G+ T TE+ + L L
Sbjct: 263 --------ISP-LKALVL-------DQVTKMQSLGIVAAHLTGEATMTESDRVYASLHLA 306
Query: 162 KPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
R KLLYVTPE+ A ++ L+ L R N L V+DEAHCVS+WGHDFRP YR L
Sbjct: 307 TLRTKLLYVTPEKIAASDKLKGCLEQLYRRNLLQRFVIDEAHCVSQWGHDFRPDYRNLSI 366
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
LR +P++A+TATA P V++DI+ LK K K F S R+NL ++V L
Sbjct: 367 LRT-NFPKVPMMAMTATATPRVREDILHQLKM-KNTKWFIQSFNRTNLKFEVRPKKL--- 421
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERS 330
+ KE IE + GI+YC +R +A+ L R + +R
Sbjct: 422 -KSCTKEIIE--VIHSEFPRRSGIVYCLSRRECDLVAEELSRAGLAASAYHAGMTDAQRR 478
Query: 331 RVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
R+QE++++ + ++ ATI+FGMGID+ +VRFV+H +P SI YYQE+GR+GRDGL +
Sbjct: 479 RIQEAWIQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRSGRDGLPAT 538
Query: 390 CRIYHSEHSKKSLEYVIKTDT--STKREQLELKFKNYLSMLEYCE 432
C +Y+ H L +I+ DT S ++L + M+ YCE
Sbjct: 539 CILYYHWHDVVRLRKLIQGDTPGSNAFANVQLHEEALFRMVSYCE 583
>gi|423066192|ref|ZP_17054982.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
gi|406712234|gb|EKD07423.1| ATP-dependent DNA helicase RecQ [Arthrospira platensis C1]
Length = 739
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 202/393 (51%), Gaps = 48/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+DSF+ Q++ I + L+ D+ MPTG G + + +
Sbjct: 12 QSLQQCLKQYFGYDSFRPG-QQEIIEQV-LQKRDVLAIMPTGG----GKSLCFQLPALLK 65
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ D+ + + T ++A
Sbjct: 66 PGLTLV-----------VSPLIA-----LMQDQVEALKDNG----IGATFLNSTVDIHEA 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E +++ +IKLLYV PER ++ F L L ++ +V+DEAHCVS+WGHDFRP
Sbjct: 106 RQRESAILQGQIKLLYVAPERLLSPQFLDFLDRLEAAFGISTLVIDEAHCVSDWGHDFRP 165
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++R + +P IALTATA V+ DII + +PY V S +RSNL+Y VI
Sbjct: 166 EYRQIQQVRSRYPH-VPAIALTATATERVRFDIIKQIVLKQPY-VHVASFYRSNLYYQVI 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + + IE G GIIYC +R+ ++A L+
Sbjct: 224 PKQ-PKKRFPQLLKVIESMSGS-------GIIYCSSRKRVEEVALQLQHNNIPALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R F+R ++ +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAGR
Sbjct: 276 MADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG + C ++ S K++EY+I K D +R
Sbjct: 336 DGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQR 368
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 213/410 (51%), Gaps = 49/410 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI + L D FV MPTG + + A I
Sbjct: 838 LKDHFRMSGFRHN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA-----------VI 884
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQT-KTENKAILEEL 158
GN R +SP+LS ++ + D + L+ L SG K + IL+ L
Sbjct: 885 DTGNTRGVTIVVSPLLS--LMQDQIDHLKV------LHILARQFSGDVDKAQRDMILDAL 936
Query: 159 RLVK-PR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
R K P ++LLYVTPE +++F L + +KLA IV+DEAHCVS+WGHDFRP
Sbjct: 937 RSSKNPENMVRLLYVTPEMIGKSQAFLNALDKVYSNDKLARIVIDEAHCVSQWGHDFRPD 996
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY-KVFKTSTFRSNLFYDVI 273
Y+ LGE+R+ +P++ALTATA P V DI L + P ++F S R NLFYD+
Sbjct: 997 YKTLGEVRRRYPK-VPVMALTATATPHVIVDI--KLNLSIPQCEIFSQSFNRPNLFYDI- 1052
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-----------R 322
+ ++ + I + D++ GI+Y +R+ +A LR
Sbjct: 1053 -----RTKGKNIVQTIADLIQSDHEGE-TGIVYTLSRKSAETIAKKLRDQSGISAHHYHA 1106
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
K+ E++ VQ + G+I V+ ATI+FGMGID+ +VRFVVH +P S+ YYQE+GRAG
Sbjct: 1107 KMETEEKTDVQRKWQSGQIKVVVATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRAG 1166
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG QS+C +Y SL +I D +EQ + + + ++++CE
Sbjct: 1167 RDGGQSHCYLYFGYGDITSLRKMI-NDGEGNQEQRDRQSQMLNRVIDFCE 1215
>gi|365875470|ref|ZP_09414998.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442588734|ref|ZP_21007544.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
gi|365756729|gb|EHM98640.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442561492|gb|ELR78717.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
Length = 735
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 200/393 (50%), Gaps = 54/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+ LK FGF +FK ++ I LL D+FV MPTG G + + + G
Sbjct: 8 IAESLKKYFGFTTFKG--YQEQIISSLLEGSDVFVLMPTGG----GKSLCYQLPALMSEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+ +SP+++ ++ V G S + ++ S KT+ K +
Sbjct: 62 TAIV-----------VSPLIA-----LMKNQVDAVNGLSSEEGVAHVLNSSLNKTQTKTV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE + E + + + +++ +DEAHC+SEWGHDFRP
Sbjct: 106 MDDIR--NGRTKLLYVAPESLIKEEYIDFFKEV----PISFFAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L + + +P+IALTATA P V+ DI L V+K S R NLFY+V
Sbjct: 160 YRNLKSIIDKIAD-VPVIALTATATPKVQDDIQKTLGMTNAL-VYKESFNRPNLFYEV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANN--CGIIYCRTREHTTDLA--------DALRRKV 324
K I+K + K KA N GI+YC +R + A +AL
Sbjct: 216 ---------RPKVNIDKEIVKFIKAQNGKSGIVYCLSRRKVEEFAQLLQVNGLNALPYHA 266
Query: 325 NKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++RV Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ +YYQE+GRAG
Sbjct: 267 GLDAKTRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + +C ++ + LE + ++RE
Sbjct: 327 RDGGEGHCIAFYDPKDIEKLEKFLAQKPVSERE 359
>gi|376003245|ref|ZP_09781059.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
gi|375328405|emb|CCE16812.1| ATP-dependent DNA helicase [Arthrospira sp. PCC 8005]
Length = 739
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 202/393 (51%), Gaps = 48/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+DSF+ Q++ I + L+ D+ MPTG G + + +
Sbjct: 12 QSLQQCLKQYFGYDSFRPG-QQEIIEQV-LQKRDVLAIMPTGG----GKSLCFQLPALLK 65
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ D+ + + T ++A
Sbjct: 66 PGLTLV-----------VSPLIA-----LMQDQVEALKDNG----IGATFLNSTVDIHEA 105
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E +++ +IKLLYV PER ++ F L L ++ +V+DEAHCVS+WGHDFRP
Sbjct: 106 RQRESAILQGQIKLLYVAPERLLSPQFLEFLDRLEAAFGISTLVIDEAHCVSDWGHDFRP 165
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ ++R + +P IALTATA V+ DII + +PY V S +RSNL+Y VI
Sbjct: 166 EYRQIQQVRSRYPH-VPAIALTATATERVRFDIIKQIVLKQPY-VHVASFYRSNLYYQVI 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K + + + IE G GIIYC +R+ ++A L+
Sbjct: 224 PKQ-PKKRFTQLLKVIESMSGS-------GIIYCSSRKRVEEVALKLQHHNIQALPYHAG 275
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ +R F+R ++ +I ATI+FGMGID+ +VRFV+H+ +P S+ YYQESGRAGR
Sbjct: 276 MADSDRLESHTRFIRDDVRIIVATIAFGMGIDKPDVRFVIHYDLPKSLENYYQESGRAGR 335
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG + C ++ S K++EY+I K D +R
Sbjct: 336 DGQPAQCLLFFSYGDMKTIEYLIEQKPDVDEQR 368
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 211/410 (51%), Gaps = 54/410 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L LF SF+ Q +AI L D+FV MPTG + + A I
Sbjct: 741 LNRLFHLKSFRPN-QLEAIVSTL-NGRDVFVLMPTGGGKSLCYQLPA-----------LI 787
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+G R ISP++S D+ + ++ + +I S + E K+ LE+ R
Sbjct: 788 SSGKTRGTTIVISPLIS-----LMQDQVQHLLHKN--IRAGMISSKGSAAERKSTLEQFR 840
Query: 160 LVKPRIKLLYVTPERAVT-ESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
++L+Y++PE T + ++ L +LA +VVDEAHCVS WGHDFRP Y+ +
Sbjct: 841 --NGELQLVYLSPEMVNTSQHIQRIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGM 898
Query: 219 GELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI---- 273
+Q F +P++ALTATA V+ DI+ L+ + P + K S R+NLFY++
Sbjct: 899 SLFKQQFP--QVPVMALTATANEKVRMDIVHHLQMSDPV-LLKQSFNRTNLFYEIKWKAA 955
Query: 274 -FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR---------- 322
F D ++D Y K+ N GIIYC +++ +D L +
Sbjct: 956 NFLDWIRD-YILTKQ-----------QNKTGIIYCHSKQSCEVTSDRLNQWGVRCSYYHA 1003
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ ER ++Q + + I VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAG
Sbjct: 1004 GLSPTERFQIQTDWQQNRIQVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 1063
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDGL S C +++S +SL+ +I+ D+ RE E +++YCE
Sbjct: 1064 RDGLPSECIMFYSYKDARSLQNMIQRDSELDREGKESHLAKLRQVVQYCE 1113
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 210/414 (50%), Gaps = 58/414 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI + L D FV MPTG + + A +
Sbjct: 864 LKDHFRMSGFRHN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA-----------VV 910
Query: 100 LNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
NG R +SP+LS +LR + + + +G D KT I
Sbjct: 911 NNGATRGITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDID------------KTHKNMI 958
Query: 155 LEELRLVKPR--IKLLYVTPE---RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
L+ L P +KLLYVTPE ++VT F LQ R KLA V+DEAHCVS+WGH
Sbjct: 959 LDALNNKNPENFLKLLYVTPEMISKSVT--FTNALQRTYRNKKLARFVIDEAHCVSQWGH 1016
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y+ LGELR+ N +P++ALTATA +V D+ S L + +VF S R NL+
Sbjct: 1017 DFRPDYKALGELRRMFPN-VPVMALTATATKNVIVDVKSNLGIDG-CEVFSQSFNRPNLY 1074
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA-----------D 318
YDV K+ + E I+ + A+ GIIY R+ + ++A +
Sbjct: 1075 YDVRPKG--KNLLQSIAELIQ-----ERHADQTGIIYTLARKSSENIAKKLVQTYGISAE 1127
Query: 319 ALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
A + +++ +Q + RG I V+ ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 1128 AYHAGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQET 1187
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG +S C +Y +L +IK + +Q E + + ++EYCE
Sbjct: 1188 GRAGRDGEKSDCYLYFGYGDISTLRKMIKEGEGSD-QQKERQAEMLNRVIEYCE 1240
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 210/414 (50%), Gaps = 58/414 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI + L D FV MPTG + + A +
Sbjct: 864 LKDHFRMSGFRHN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA-----------VV 910
Query: 100 LNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
NG R +SP+LS +LR + + + +G D KT I
Sbjct: 911 NNGATRGITIVVSPLLSLMQDQVDHLRDINIQAAQFSGDID------------KTHKNMI 958
Query: 155 LEELRLVKPR--IKLLYVTPE---RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
L+ L P +KLLYVTPE ++VT F LQ R KLA V+DEAHCVS+WGH
Sbjct: 959 LDALNNKNPENFLKLLYVTPEMISKSVT--FTNALQRTYRNKKLARFVIDEAHCVSQWGH 1016
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y+ LGELR+ N +P++ALTATA +V D+ S L + +VF S R NL+
Sbjct: 1017 DFRPDYKALGELRRMFPN-VPVMALTATATKNVIVDVKSNLGIDG-CEVFSQSFNRPNLY 1074
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA-----------D 318
YDV K+ + E I+ + A+ GIIY R+ + ++A +
Sbjct: 1075 YDVRPKG--KNLLQSIAELIQ-----ERHADQTGIIYTLARKSSENIAKKLVQTYGISAE 1127
Query: 319 ALRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
A + +++ +Q + RG I V+ ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 1128 AYHAGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQET 1187
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG +S C +Y +L +IK + +Q E + + ++EYCE
Sbjct: 1188 GRAGRDGEKSDCYLYFGYGDISTLRKMIKEGEGSD-QQKERQAEMLNRVIEYCE 1240
>gi|297738545|emb|CBI27790.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/439 (30%), Positives = 208/439 (47%), Gaps = 76/439 (17%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
++ L L+ FG F+ Q +AI IL D F MPTG + + A ++
Sbjct: 21 KEALVKLLRWHFGHAEFRGR-QLEAIEAIL-SGRDCFCLMPTGGGKSMCYQIPALAK--- 75
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + + P+++ + ++ + E + S QT
Sbjct: 76 -PGIVLV-----------VCPLIALM-------ENQVMALKEKGIAAEFLSSTQTTKVRD 116
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I E+L+ KP ++LLYVTPE T F L + L I +DEAHC+S WGHDFR
Sbjct: 117 KIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWGHDFR 176
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+YR+L LR + +PI+ALTATA P V++D+I L P V K+S R N++Y+V
Sbjct: 177 PSYRKLSSLRNHLPD-VPILALTATAVPKVQKDVIESLCLQNPL-VLKSSFNRPNIYYEV 234
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ DLL D YA + + ++ C N CGI+YC R +L+ L +
Sbjct: 235 RYKDLLDDVYADLSKLLKSC------GNVCGIVYCLERTTCDELSAHLSKNGISSAAYHA 288
Query: 324 -VNKHERSRVQESFMRGEINVITATIS-----------------FGMGIDRQNVRFVVHW 365
+N RS V + ++ +I V+ + +GIDR++VR V H+
Sbjct: 289 GLNNKLRSSVLDDWISSKIQVVINSWGFFFIFNFFLFFALFNIILSIGIDRKDVRIVCHF 348
Query: 366 GMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT------------DTSTK 413
+P S+ A+YQESGRAGRD L S +Y+ +K +E+++ D +K
Sbjct: 349 NIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSK 408
Query: 414 REQLELKFKNYLSMLEYCE 432
+ ++ M+EYCE
Sbjct: 409 KS-----LADFSHMVEYCE 422
>gi|374628883|ref|ZP_09701268.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
gi|373906996|gb|EHQ35100.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
Length = 720
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 166/279 (59%), Gaps = 29/279 (10%)
Query: 165 IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL-RQ 223
I LLYV+PE+ ++SF LL+ K++ VDEAHC+S+WGH+FRP YR+LG + R+
Sbjct: 104 IDLLYVSPEKMASQSFRKLLKS----AKISLFAVDEAHCISQWGHEFRPEYRQLGLIKRE 159
Query: 224 FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYA 283
F G +P+IALTATA P+V+ DI+ LK P+ V S RSNL Y+V + D+
Sbjct: 160 FPG--VPVIALTATANPAVRDDILRQLKLKDPF-VQIGSFRRSNLNYEVREKE---DTLG 213
Query: 284 HVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHERSRVQ 333
+ +I K GIIYC +R L L ++K ER++ Q
Sbjct: 214 QILSYIR------GKKGESGIIYCSSRNSVEILTKKLNSYGIYSLPYHAGLSKDERAKTQ 267
Query: 334 ESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIY 393
E F++GE+ ++ AT++FGMGI++ +VR+V+H+ +P ++ YYQE+GRAGRDG S C ++
Sbjct: 268 EKFIKGEVFLVVATVAFGMGINKPDVRYVLHYDLPPNLERYYQETGRAGRDGKSSDCILF 327
Query: 394 HSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+S + EY I S K++++ + + M E+CE
Sbjct: 328 YSRGDRIKAEYFIGRMQSAKQKRIAREKLD--EMTEFCE 364
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 163/278 (58%), Gaps = 27/278 (9%)
Query: 165 IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQF 224
+KLLY++PER V SF L+ +++ +DEAHC+S+WGH+FRP YR+L +R+
Sbjct: 111 LKLLYISPERLVQPSFIEFLKS----TRISLFAIDEAHCISQWGHEFRPEYRKLSIIRR- 165
Query: 225 TGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAH 284
T +PIIALTATA PSV+ DIIS L + P VF S R NL Y ++ + D
Sbjct: 166 TFADVPIIALTATATPSVRSDIISELSLHNP-AVFVGSFNRENLIYRIVKKE---DGEQQ 221
Query: 285 VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSRVQE 334
+ +F++ + N GI+YC ++ TDLA L++ + K R Q+
Sbjct: 222 LVQFLK------SHQNESGIVYCFSKRQVTDLARVLQKNGFSALPYHADLPKSVRHETQD 275
Query: 335 SFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYH 394
F+R E+ +I AT++FGMGI++ +VRFVVH+ +P ++ YYQE+GRAGRDG + C + +
Sbjct: 276 RFLRDEVRIIVATVAFGMGINKPDVRFVVHFDLPKNLEHYYQETGRAGRDGDPAECLLLY 335
Query: 395 SEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S + +EY+I+ Q+ L + M+ YCE
Sbjct: 336 SRGDFRKIEYLIEQMAEGTERQVSL--RKLHEMVGYCE 371
>gi|282600067|ref|ZP_05972875.2| ATP-dependent DNA helicase RecQ [Providencia rustigianii DSM 4541]
gi|282566927|gb|EFB72462.1| ATP-dependent DNA helicase RecQ [Providencia rustigianii DSM 4541]
Length = 603
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 215/413 (52%), Gaps = 51/413 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ ++A+ +L D V MPTG G + + + PG +
Sbjct: 12 LNSTFGYQSFRP--GQEAVIGGILDGRDCLVLMPTGG----GKSLCYQVPALVKPGITLV 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + + + + S QT E + I+E
Sbjct: 66 -----------VSPLISLM-------KDQVDQLKLHGVEAACLNSSQTPLEQRQIME--L 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ RIKLLYV PER +T+ Y Q L +N + + VDEAHC+S+WGHDFRP YR LG
Sbjct: 106 CAEGRIKLLYVAPERLLTD---YFSQQLSSWN-ITLLAVDEAHCISQWGHDFRPEYRALG 161
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LR+ N +P++ALTATA+ + + DII +L+ N P V +S R N+ Y ++
Sbjct: 162 QLRRTLPN-VPVMALTATADEATRTDIIRLLELNDPL-VHVSSFDRPNIRYTLV------ 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y + + G+ K+ GI+YC +R + A+ L+++ ++ +R
Sbjct: 214 EKYKPLDQLWFFIKGQKGKS---GIVYCNSRTKVEETAERLQKRGLSVAAYHAGLDNAQR 270
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ++F + + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG+++
Sbjct: 271 EWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAE 330
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 331 AILFYDPADMAWLRRCLEEKPAGMQQDIERHKLNAIAAFAEAQTCRRLVLLNY 383
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 211/414 (50%), Gaps = 46/414 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ LK F F+ Q +AI + L D FV MPTG + + A
Sbjct: 924 QEVRKALKDRFRMSGFRHN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA------- 974
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
I +G + +SP+LS ++ + D + + + S K
Sbjct: 975 ----VISSGRTNGVSIVVSPLLS--LMQDQVDHLKALNIAASAFN-----SSTPAAARKH 1023
Query: 154 ILEELRLVKPR--IKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
IL P ++LLYVTPE S F L+ L R KLA +V+DEAHCVS+WGHD
Sbjct: 1024 ILALFSKANPEHFLQLLYVTPEMVSKSSQFCQGLETLYRKKKLARLVIDEAHCVSQWGHD 1083
Query: 211 FRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
FRP Y+ LGE+R+ F S+P++ALTATA P+V DI L + KVF S R NL+
Sbjct: 1084 FRPDYKALGEVRRRFP--SVPVMALTATATPNVIVDIKHNLSIDG-CKVFSQSFNRPNLY 1140
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y++ + K + ++ E I+ + GI+Y +++ T +AD LR K
Sbjct: 1141 YEI--REKGKGAVENIAELIQS-----QYSGQTGIVYTLSQKSTVSIADKLRDKFGISAH 1193
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ E++R+Q + +G I ++ ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 1194 HYHAGIPADEKTRIQRDWQKGRIKIVVATIAFGMGIDKPDVRFVIHHYLPKSLEGYYQET 1253
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG+ S C +Y S K+L I D+ Q + + M+++CE
Sbjct: 1254 GRAGRDGIHSDCFLYFSYGDIKNLRKFI-ADSEGSEAQKARQREMLNRMVDFCE 1306
>gi|406674061|ref|ZP_11081273.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
gi|405584835|gb|EKB58711.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
Length = 733
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 210/394 (53%), Gaps = 56/394 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ +LK FGF +FK +++ + LL D+FV MPTG +S P
Sbjct: 8 LSQELKKYFGFSTFKG--RQEEVISSLLEGKDVFVLMPTGG---------GKSLCYQLPA 56
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAI 154
+L G +SP+++ ++ V G S+ + ++ S +T+ + +
Sbjct: 57 --LLLEGTAI----VVSPLIA-----LMKNQVDAVNGLSNEDGVAHVLNSSLNRTQTQQV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+++ K + KLLYV PE + + + L+ + K++++ +DEAHC+SEWGHDFRP
Sbjct: 106 FDDIE--KGKTKLLYVAPESLIKDEYSDFLKSV----KISFVAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR L + + + +PIIALTATA P V+ DI L + +V+K+S R NL+Y+V
Sbjct: 160 YRNLKNIIEKIAD-VPIIALTATATPKVQDDIQKTLGMSDA-EVYKSSFNRPNLYYEVRP 217
Query: 273 -IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRK 323
I D + +FI + GK GIIYC +R+ + A +AL
Sbjct: 218 KINVD------KEIVKFINQRKGK------SGIIYCLSRKKVEEFAQLLQVNGINALPYH 265
Query: 324 VNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+++RV Q+ F+ E +VI ATI+FGMGID+ +VRFV+H+ P S+ +YYQE+GRA
Sbjct: 266 AGLDQKTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + +C ++ + LE + +++E
Sbjct: 326 GRDGGEGHCLAFYDPKDIEKLEKFLAQKPLSEKE 359
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 209/384 (54%), Gaps = 47/384 (12%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
L D F+ MPTG + + A ++ G F+ ISP++S
Sbjct: 733 LTGRDCFILMPTGGGKSLCYQLPALTK----KGVTFV-----------ISPLIS-----L 772
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFH 181
D+ S + ++++ L L+ + KT+++ I L + KL+YVTPER A +
Sbjct: 773 IQDQVSALR-QNNIRALCLLSTQDQKTQSQ-IHRTLCMKDVLCKLIYVTPERIAASHRLK 830
Query: 182 YLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPS 241
+Q+L L+ V+DEAHCVS+WGHDFRP Y+RL LR++ ++P++ALTATA
Sbjct: 831 QTMQNLYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLSCLREWF-PTVPMMALTATATKR 889
Query: 242 VKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKA-- 299
VK+DI+ LK VF+ S R NLFY+V K SY K+ +E+ +GK+ +
Sbjct: 890 VKRDILMNLKMTNAL-VFEQSFNRPNLFYEV----RKKSSY---KKCVEE-IGKEIRTRF 940
Query: 300 -NNCGIIYCRTREHTTDLADALRRKVNKH----------ERSRVQESFMRGEINVITATI 348
N CGI+YC +R+ ++ AL + +K +R Q+ + G++N++ ATI
Sbjct: 941 RNKCGIVYCLSRKECETVSQALNQSGHKSLFYHAGMDPADREAYQDQWQSGKVNIMCATI 1000
Query: 349 SFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT 408
+FGMGID+ +VRFV H+ +P S+ YYQE+GRAGRDG + C +Y++ K +I
Sbjct: 1001 AFGMGIDKPDVRFVFHFSLPKSMEGYYQEAGRAGRDGKPAVCVLYYNYGDKAKHMRLIDI 1060
Query: 409 DTSTKREQLELKFKNYLSMLEYCE 432
+ EQ E N +++YCE
Sbjct: 1061 GEGSY-EQKEQHRSNLNQVVQYCE 1083
>gi|224535963|ref|ZP_03676502.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226021|ref|ZP_17212487.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522418|gb|EEF91523.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630878|gb|EIY24859.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 727
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 207/405 (51%), Gaps = 77/405 (19%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + +
Sbjct: 8 LTDQLKKYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGGGKSLCYQLPSLMMEGTGIV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I +SD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVKSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 114 TK------------------LLYVAPESLTKEENVEFLKTV----KISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVQHDIQKNLGMIDA-EVFKSSFNRP 209
Query: 267 NLFYDV------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
NL+Y+V I D++K FI+ N + GIIYC +R+ +LA+ L
Sbjct: 210 NLYYEVRPKTNNIDRDIIK--------FIK------NNSEKSGIIYCLSRKKVEELAEIL 255
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ ++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S
Sbjct: 256 QANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKS 315
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 316 LEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|429327654|gb|AFZ79414.1| ATP-dependent DNA helicase, RecQ family member protein [Babesia
equi]
Length = 809
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 208/392 (53%), Gaps = 37/392 (9%)
Query: 54 QKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISP 113
Q +AI + LL +D FV +PTG G + ++P D + N + I P
Sbjct: 172 QLEAI-NCLLDGNDTFVVIPTGG----GKSLC----FQLPAVVDHYMQKNCLTV--VIMP 220
Query: 114 ILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPE 173
++S + + + K + R+ +V T +E K I +++ + +L++TPE
Sbjct: 221 LISLIHDQMKRLKNLGIGCRA-------LVGELTWSERKGIYDDISENTESVSILFLTPE 273
Query: 174 RAVT-ESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPII 232
T ++ LL L + +L+ V+DE HCVS+WG+DFRP Y +G ++ + +P+
Sbjct: 274 GLTTSKNLLDLLHQLDKARRLSRFVLDEVHCVSQWGNDFRPNYGAMGLIKHDFPH-LPVC 332
Query: 233 ALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKC 292
ALTATA SV +D+I L+ P +FK+ R NL Y+VI D K S V IE
Sbjct: 333 ALTATATESVMRDVIKKLRLRNPI-IFKSDFNRKNLRYEVIKKD--KQSKRAVNGLIE-- 387
Query: 293 LGKDNKANNCGIIYCRTREHTTDLADAL---------RRKVNKHERSRVQESFMRGEINV 343
L + + CGI+YC + D+A+AL ++N R+R+ ++ G +NV
Sbjct: 388 LITNRFMDQCGIVYCLSCREAEDVANALSSHVTSCYYHAQINMVTRNRIYHDWIEGRVNV 447
Query: 344 ITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKK--- 400
I AT++FGMGID+ +VRFV+H+ MP S+ Y+QESGRAGRDG S C + + H +
Sbjct: 448 IVATLAFGMGIDKPDVRFVIHFSMPKSLENYFQESGRAGRDGKLSVCVLLYEFHDSQRLL 507
Query: 401 SLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+L + S + EQ + K LSM+ YCE
Sbjct: 508 TLTQGVSAQGSQESEQQMVNRKQILSMVNYCE 539
>gi|383114099|ref|ZP_09934864.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|423294544|ref|ZP_17272671.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|313694193|gb|EFS31028.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|392675735|gb|EIY69176.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 726
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 208/407 (51%), Gaps = 68/407 (16%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ LT +LK FGF+ FK ++AI + LL D FV MPTG + SV
Sbjct: 2 AGKIN---LTDELKKYFGFNKFKG--NQEAIINNLLDGKDTFVLMPTGGGKSLCYQLPSV 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I RSD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+T KLLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKT------------------KLLYVAPESLTKEENVEFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QV 200
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
FK+S R NL+Y+V + A++ I K + N GIIYC +R+ +LA+
Sbjct: 201 FKSSFNRPNLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAE 252
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L+ ++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P
Sbjct: 253 ILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIP 312
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 313 KSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|224540740|ref|ZP_03681279.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517639|gb|EEF86744.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
Length = 602
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 213/403 (52%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IR LL D V MPTG G + + + G +
Sbjct: 5 LKRYFGYDSFR-PLQEEIIR-TLLAGKDSLVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D S+ L S +TEN A+
Sbjct: 59 -----------VSPLIS----LMKDQVESLCANGVAAGALN---SSNDETENAALRRSC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +YLL+ + ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLIAEA-NYLLRDM----HISLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+R+ N IP+IALTATA+ ++DI+ L N+P KVF +S R NL V K
Sbjct: 154 FIREMFPN-IPVIALTATADKITREDIVRQLHLNQP-KVFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI++ G+ GIIYC +R T +A L+++ ++ R
Sbjct: 212 EKSKAILDFIDRHRGES------GIIYCMSRSKTETVAQMLQKQGLRVAVYHAGLSSARR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + ++ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 266 DEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATESGQQGINLEKLQRMQQYAE 363
>gi|386389497|ref|ZP_10074311.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
gi|385695267|gb|EIG25829.1| ATP-dependent DNA helicase RecQ [Haemophilus paraphrohaemolyticus
HK411]
Length = 601
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 199/365 (54%), Gaps = 51/365 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+ F+ + Q++ I L D FV M TG + V A
Sbjct: 11 LQNVFGYQQFR-QGQQEVIESTLA-GKDTFVIMTTGGGKSLCYQVPA-----------LC 57
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L G I+ ++S +D ++T + L S QT E +A+ E +
Sbjct: 58 LEG--------ITLVISPLISLMKDQVDQLLTNGIEAAYLN---STQTLEEQRAV--EQK 104
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T+ F++ + H K+++I VDEAHCVS+WGHDFRP Y LG
Sbjct: 105 ALNGQLKLLYLSPEKVMTQGFYHFISHC----KISFIAVDEAHCVSQWGHDFRPEYTLLG 160
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR T +IP++ALTATA+P+ + DI+ L+ N P+ + S R N+ Y V +
Sbjct: 161 NLRN-TFPNIPLMALTATADPTTRADILHHLRLNDPH-TYLGSFDRPNIRYTV------Q 212
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ + G+ K+ GI+YC +R+ ++ + L + ++ +R
Sbjct: 213 EKFKPMEQLAKFIAGQKGKS---GIVYCNSRKKVEEITEKLSARNISVMGYHAGMSVQQR 269
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ +F R I V+ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L S
Sbjct: 270 ETVQNAFQRDNIQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSQ 329
Query: 390 CRIYH 394
+++
Sbjct: 330 AVMFY 334
>gi|237719061|ref|ZP_04549542.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|293369500|ref|ZP_06616079.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|299148144|ref|ZP_07041206.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|336415756|ref|ZP_08596095.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423292370|ref|ZP_17270948.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|229451440|gb|EEO57231.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|292635385|gb|EFF53898.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|298512905|gb|EFI36792.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|335940635|gb|EGN02502.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392661779|gb|EIY55352.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 726
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/407 (34%), Positives = 208/407 (51%), Gaps = 68/407 (16%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ LT +LK FGF+ FK ++AI + LL D FV MPTG + SV
Sbjct: 2 AGKIN---LTDELKKYFGFNKFKG--NQEAIINNLLDGKDTFVLMPTGGGKSLCYQLPSV 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I RSD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+T KLLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKT------------------KLLYVAPESLTKEENVEFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QV 200
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
FK+S R NL+Y+V + A++ I K + N GIIYC +R+ +LA+
Sbjct: 201 FKSSFNRPNLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAE 252
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L+ ++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P
Sbjct: 253 ILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIP 312
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 313 KSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 213/409 (52%), Gaps = 57/409 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK++FG+ SF+ Q++ I+ ++ D+F+ MPTG + + A R G
Sbjct: 5 LDHTLKSVFGYGSFRPP-QREVIQRVVA-GEDVFLVMPTGGGKSLCYQIPALHR----EG 58
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTG--RSDLYQLELIVSGQTKTENKA 153
+ +SP++S +D +V R+ Y L T E++A
Sbjct: 59 VAIV-----------VSPLISLM----KDQVDGLVDAGVRAACYNSSL-----TAEESRA 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ +L + + LLYV PER + F L L KLA +DEAHC+S+WGHDFRP
Sbjct: 99 VSRQL--AQGELDLLYVAPERLLLPDFLERLGGL----KLALFAIDEAHCISQWGHDFRP 152
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y +LG LR+ S+PI+A+TATA+P ++DII L + +F R N+ Y VI
Sbjct: 153 DYVKLGRLRELF-PSVPIVAMTATADPETRRDIIRQLGIERA-TLFVAGFDRPNITYAVI 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
V + + G+ +++ GI+Y +R+ + + L++
Sbjct: 211 ------PKQKPVNQLLSFLKGRGDES---GIVYALSRKRVEQVTERLQQAGFDAAAYHAG 261
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+ ERSRVQ++F R ++ V+ AT++FGMGID+ NVRFVVH+ +P S+ +YYQE+GRAGR
Sbjct: 262 LPDRERSRVQDAFRRDDLRVVVATVAFGMGIDKPNVRFVVHYDLPKSVESYYQETGRAGR 321
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DGL S + + +I+ + +R ++EL+ N +M+ Y E
Sbjct: 322 DGLPSQALMLFGMGDVMTARSLIENSDNAERVRIELQKLN--AMVSYAE 368
>gi|160882388|ref|ZP_02063391.1| hypothetical protein BACOVA_00337 [Bacteroides ovatus ATCC 8483]
gi|156112201|gb|EDO13946.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
Length = 749
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 209/409 (51%), Gaps = 68/409 (16%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVG 81
+ GK++ LT +LK FGF+ FK ++AI + LL D FV MPTG +
Sbjct: 23 KMAGKIN---LTDELKKYFGFNKFKG--NQEAIINNLLDGKDTFVLMPTGGGKSLCYQLP 77
Query: 82 SVVSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL 136
SV+ + + I P + N N +G I SS +K +I RSD
Sbjct: 78 SVLMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD- 130
Query: 137 YQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYI 196
I++G+T KLLYV PE E L+ + K+++
Sbjct: 131 -----ILAGKT------------------KLLYVAPESLTKEENVEFLRSV----KISFY 163
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VDEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L
Sbjct: 164 AVDEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA- 221
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
+VFK+S R NL+Y+V + A++ I K + N GIIYC +R+ +L
Sbjct: 222 QVFKSSFNRPNLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEEL 273
Query: 317 ADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A+ L+ ++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+
Sbjct: 274 AEILQANGINARPYHAGMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYD 333
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+P S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 334 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 382
>gi|37522198|ref|NP_925575.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
gi|35213198|dbj|BAC90570.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 746
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 212/418 (50%), Gaps = 60/418 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
V +Q+L LK FG + F+ ++ I + + HD + MPTG G ++ +
Sbjct: 13 VDDQKLGEALKRHFGHERFRP--GQRRIVELAIAGHDQLILMPTGG----GKSLTYQLPA 66
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYL---RFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ PG + +SP+++ + R R++ + S L +G+
Sbjct: 67 LLLPGLTVV-----------VSPLIALMHDQVDRLRENGIAATFLNSTL------AAGER 109
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
+AI + R+KLLY++PER ++E L+++ R L+ + VDEAHCVSEW
Sbjct: 110 TRREQAI------AQGRMKLLYLSPERLLSEECLAFLEYVQRQGGLSLLAVDEAHCVSEW 163
Query: 208 GHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
GHDFRP YR+L +R+ ++P +ALTATA V+QDI+ LK P+ + S R N
Sbjct: 164 GHDFRPEYRQLAAVRERFA-ALPTLALTATATERVRQDILVQLKLRDPH-IHIASFDRPN 221
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNC-GIIYCRTREHTTDLADAL------ 320
L Y V+ D K +YA + LG+ + + I+YC++R LA+ L
Sbjct: 222 LHYAVLAKD--KGAYAEL-------LGRLRRLDGASAIVYCQSRRAVEALAERLVADGLN 272
Query: 321 ----RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+ RSR Q F+R + V+ AT++FGMGI + +VR V H+ +P ++ YYQ
Sbjct: 273 ALPYHAGMAAEMRSRHQTQFLRDDAPVLVATVAFGMGIAKPDVRAVFHYELPRNLEGYYQ 332
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKREQLELKFKNYLSMLEYCE 432
ESGRAGRDG + C ++ S + +EY++ K+D +R L ML Y E
Sbjct: 333 ESGRAGRDGQPADCVLFFSPGDRAKIEYLVAQKSDPHEQR----LARSQLAQMLAYAE 386
>gi|265765824|ref|ZP_06093865.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|263253492|gb|EEZ24957.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
Length = 607
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 214/409 (52%), Gaps = 56/409 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK FG+DSF+ LQ++ I H L+ D V MPTG G + + +
Sbjct: 6 QMIQTLKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLME 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S K + T R++ + S +TEN +
Sbjct: 60 GTAIV-----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANL 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP
Sbjct: 102 RRAC--ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPE 154
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y R+G LR QF ++P+IALTATA+ ++DII L+ +P ++F +S R NL V
Sbjct: 155 YARMGFLRNQFP--NVPMIALTATADKITREDIIRQLQLRQP-QIFISSFDRPNLSLSVK 211
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + +FI + G+ GI+YC +R T +A L++
Sbjct: 212 RGYQPKEKSKAIIDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAG 265
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGR
Sbjct: 266 LSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG+ S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 DGMPSDTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 369
>gi|390941990|ref|YP_006405751.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390415418|gb|AFL82996.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 711
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 196/373 (52%), Gaps = 49/373 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+ F+ QK+ I+ +L + D V MPTG G V + I G +
Sbjct: 14 LKEFFGYSEFRGN-QKQIIQSVLSK-KDTIVLMPTGG----GKSVCYQVPAMIFDGLTLV 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + ++ + S Q+++E + I +++
Sbjct: 68 -----------ISPLISLM-------KDQVDALNANGIPAAFLNSSQSQSEQRFISSQIQ 109
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER Y L ++ L+ + +DEAHCVS+WGHDFRP Y ++G
Sbjct: 110 --SGKIKLLYIAPERLYRGD--YPLIDFLKTVNLSLVAIDEAHCVSQWGHDFRPEYLKIG 165
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
ELR+ + IP IALTATA+ ++DI L P + F +S RSN+ Y V +
Sbjct: 166 ELRK-SFPQIPFIALTATADKLTRKDIADKLGLKTP-QWFISSFDRSNITYRVTAK---R 220
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
D+ + EF+ D + G+IYC +R++ + A L+ + + + ER
Sbjct: 221 DAMGKLLEFL------DFHKKDSGVIYCLSRKNVEETASELQARGLSALPYHAGLPREER 274
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE F++ E+ ++ ATI+FGMGID+ NVRFVVH MP ++ YYQE+GRAGRDGL S
Sbjct: 275 EKNQELFIKDEVKIMVATIAFGMGIDKSNVRFVVHMNMPQNVEGYYQETGRAGRDGLPSD 334
Query: 390 CRIYHSEHSKKSL 402
+++S +L
Sbjct: 335 ALLFYSGQDANTL 347
>gi|146298045|ref|YP_001192636.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146152463|gb|ABQ03317.1| ATP-dependent DNA helicase, RecQ family [Flavobacterium johnsoniae
UW101]
Length = 731
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 204/382 (53%), Gaps = 47/382 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E E+ +LK FGF FK LQ++ I IL +T + FV MPTG G + +
Sbjct: 4 NEIEIHKELKKYFGFSQFKG-LQEQVITSILGKT-NTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G + +SP+++ ++ +I + S+ ++ S TKTE
Sbjct: 58 IQDGTAIV-----------VSPLIA----LMKNQVDAIRSLSSENGIAHVLNSSLTKTEI 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++ KLLYV PE E + LQ + ++++ +DEAHC+SEWGHDF
Sbjct: 103 AQVKKDIS--SGLTKLLYVAPESLTKEEYVAFLQSV----PISFVAIDEAHCISEWGHDF 156
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR L + + G +PII LTATA P V++DI+ L + FK S R NL+Y+
Sbjct: 157 RPEYRNLRTIIKQLGK-VPIIGLTATATPKVQEDILKNLDMSDA-NTFKASFNRPNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K + + FI++ GK GIIYC +R+ +A+ L+
Sbjct: 215 V--RTKTKSIESDIIRFIKQHKGK------SGIIYCLSRKKVESIAEVLQVNGISAVPYH 266
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRA
Sbjct: 267 AGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRA 326
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + +C Y+S + LE
Sbjct: 327 GRDGGEGHCLAYYSYKDVEKLE 348
>gi|401676992|ref|ZP_10808972.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
gi|400215746|gb|EJO46652.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. SST3]
Length = 609
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 218/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L+ D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLQGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQEVMAGCR--TGQIRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + +QDI+ +L N PY + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRQDIVRLLGLNDPY--IQVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 376
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 377 AQTCRRLVLLNY 388
>gi|190348308|gb|EDK40739.2| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC
6260]
Length = 1176
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 210/410 (51%), Gaps = 42/410 (10%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + L++ F SF+ Q +A+ L+ D FV MPTG + + A
Sbjct: 506 KEVYSILQSTFNLSSFRPN-QLEAVT-ATLQGKDTFVLMPTGGGKSLCYQLPA------- 556
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP++S D+ + ++ + ++ S T +E K
Sbjct: 557 ----LVTSGRTRGTTIVISPLIS-----LMQDQVQHLLDKN--IRAGMVSSKGTASERKQ 605
Query: 154 ILEELRLVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+E R ++ L+Y++PE S ++ L +LA IVVDEAHCVS WGHDFR
Sbjct: 606 TVELFR--SGQLDLVYLSPEMVNASSQIQNIISRLNSNQQLARIVVDEAHCVSSWGHDFR 663
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ + +Q N IP++ALTATA V+ DII L +P + K S R+NLFY++
Sbjct: 664 PDYKGMNMFKQQYPN-IPLMALTATANEKVRMDIIHHLNMTEPV-LLKQSFNRTNLFYEI 721
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------R 322
K + E+I + A+N GIIYC +++ ++ L
Sbjct: 722 ------KRKNGNYLEWIRDYIVA-KYAHNTGIIYCHSKQSCEQTSEKLNMWGLKTSFYHA 774
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER +Q+ + G + +I ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAG
Sbjct: 775 GMGPTERFDIQKKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 834
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG S C +++S +SL+ +I+ D+ RE E +++YCE
Sbjct: 835 RDGKPSECIMFYSYKDARSLQSMIQRDSDLDRESRENHLNKLRQVVQYCE 884
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 140/405 (34%), Positives = 206/405 (50%), Gaps = 49/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNG 102
FG DSF+ +KAI + L H+ V MPTG SL + SA + G +
Sbjct: 630 FGNDSFRP--SQKAIINCALSGHNTLVLMPTGGGKSLCYQLASA-----LMTGITVV--- 679
Query: 103 NVRSRNGWISPILSSFYLRFRD-DKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLV 161
ISP++S + + + TS+ YQ +G+ + E +
Sbjct: 680 --------ISPLVSLIQDQVANLNSTSLENNVLAYYQGSDFEAGK-----RFFAESKSVC 726
Query: 162 KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
KP++KL+++TPER +SF L A IVVDEAHCVS+WGHDFR +Y++L L
Sbjct: 727 KPKLKLVFLTPERIQLDSFLEALDSYYNNRNFALIVVDEAHCVSQWGHDFRESYQKLSVL 786
Query: 222 RQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
Q + G +P++ LTATA V+ DI+ + VF S R NL Y +K
Sbjct: 787 TQRYPG--VPLMMLTATATERVQNDILLSVGVESAV-VFTQSFNRKNLRY------CVKP 837
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHERS 330
+V + IEK + K N GI+YC +R++T D+ D L ++ ER
Sbjct: 838 KTKNVIDDIEKLI-KTKYRNQSGIVYCLSRKNTKDVCDQLVARGIKACFYHAELTPEERQ 896
Query: 331 RVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYC 390
+ Q + GE +VI ATI+FGMGI++ +VRFV+H +P ++ YYQESGRAGRDG + C
Sbjct: 897 KAQRGWSDGEFDVICATIAFGMGINKPDVRFVIHHSLPKTLEGYYQESGRAGRDGEPADC 956
Query: 391 RIYHSEHSKKSLEYVIKTD---TSTKREQLELKFKNYLSMLEYCE 432
+++S K E + D ++ E +EL N ++ YCE
Sbjct: 957 ILFYSYRDKFVYERFLMEDQKKNNSDSEHIELSRDNLNQVISYCE 1001
>gi|406933324|gb|EKD68008.1| hypothetical protein ACD_48C00110G0001, partial [uncultured
bacterium]
Length = 334
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 204/366 (55%), Gaps = 51/366 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FGFDSF+ +Q++ ++ ++ + D+ V MPTG G + + + G +
Sbjct: 10 LKHTFGFDSFR-PMQEEIVQAVIEKK-DVLVLMPTGG----GKSLCYQLPATVQDGLTVV 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP+++ +D +V ++ + + S E++ I E+L
Sbjct: 64 -----------VSPLIA----LMKDQVEGLV---ANGIKAAFLNSSLELDEHQDIREQLE 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ I +LYV+PE+ +T +F Y L+ ++N + +DEAHC+S+WGHDFRP Y +L
Sbjct: 106 --RGDIDILYVSPEKLITPNFQYSLK---KWN-VQLFAIDEAHCISQWGHDFRPGYTQLR 159
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L++ + IPIIALTATA+ + ++DI++ LK P KVF +S R NL +V+ K
Sbjct: 160 TLKE-SFPDIPIIALTATADKTTRKDILAQLKLKDP-KVFISSFDRPNLALNVL---PAK 214
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ F++K + + GIIYC +R T +A AL ++ + HER
Sbjct: 215 KRIERIITFVKK------RKHESGIIYCLSRNQTEKVATALIQEGINAGYYHAGMQSHER 268
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
++ Q+ F+ G N++ AT++FGMGID+ NVR+V+H +P ++ YYQE GRAGRDGL S
Sbjct: 269 AKAQDDFIHGRTNIVVATVAFGMGIDKSNVRYVIHHNLPKNLEGYYQEIGRAGRDGLPSE 328
Query: 390 CRIYHS 395
+++S
Sbjct: 329 TLLFYS 334
>gi|60682718|ref|YP_212862.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|60494152|emb|CAH08944.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
Length = 607
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 214/409 (52%), Gaps = 56/409 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK FG+DSF+ LQ++ I H L+ D V MPTG G + + +
Sbjct: 6 QMIQTLKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLME 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S K + T R++ + S +TEN +
Sbjct: 60 GTAIV-----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANL 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP
Sbjct: 102 RRAC--ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPE 154
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y R+G LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 155 YARMGFLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVK 211
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + +FI + G+ GIIYC +R T +A L++
Sbjct: 212 RGYQPKEKSKAIIDFITRHRGES------GIIYCMSRSKTETVAQMLQKHGIRCGVYHAG 265
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGR
Sbjct: 266 LSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG+ S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 DGMASDTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 369
>gi|332291025|ref|YP_004429634.1| RecQ familyATP-dependent DNA helicase [Krokinobacter sp. 4H-3-7-5]
gi|332169111|gb|AEE18366.1| ATP-dependent DNA helicase, RecQ family [Krokinobacter sp.
4H-3-7-5]
Length = 732
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 202/379 (53%), Gaps = 46/379 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L +LK FGF FK LQ++ IR I+ H FV MPTG G + + I
Sbjct: 7 DLHEELKRYFGFSQFKG-LQEEVIRSIVGGNHS-FVIMPTGG----GKSLCYQLPALIAE 60
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ ++ + D ++ + + + S TK E K +
Sbjct: 61 GTAIV-----------VSPLIA--LMKNQVDALRGISQEEGIAHV--LNSSLTKGEIKKV 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
E++ + KLLYV PE E L+ + ++++ +DEAHC+SEWGHDFRP
Sbjct: 106 KEDI--TRGVTKLLYVAPESLTKEENVEFLRGVT----VSFLAIDEAHCISEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR L ++ G++IPIIA+TATA P V++DI+ L FK S R NL+Y+V
Sbjct: 160 YRNLRKIIGRIGDNIPIIAVTATATPKVQEDILKNLGITDA-NTFKASFNRPNLYYEVRP 218
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE-- 328
D A + F+++ GK GIIYC R+ +LA L+ + V H
Sbjct: 219 KTAQVD--ADIIRFVKQNEGK------SGIIYCLARKRVEELAQTLQVNGLKAVPYHAGL 270
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R R Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P SI +YYQE+GRAGRD
Sbjct: 271 DAKTRVRHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRD 330
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + +C +++ + LE
Sbjct: 331 GGEGHCLAFYAYKDIEKLE 349
>gi|189502511|ref|YP_001958228.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497952|gb|ACE06499.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
Length = 724
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/397 (34%), Positives = 212/397 (53%), Gaps = 59/397 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL +LK +FG+D+F+ E Q+ I++IL + + FV MPTG G + + +
Sbjct: 8 ELYKELKEIFGYDNFR-EDQEAIIKNIL-QGKNTFVIMPTGG----GKSLCYQLPAIMQE 61
Query: 95 GADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
G I ISP+++ L+ R K +++ L V +TK
Sbjct: 62 GLAII-----------ISPLIALMKDQVDQLQSRGIKAALLNST-----LSQKVINETKQ 105
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E ++ K+LYV PE E L+ KL++I VDEAHC+S+WGH
Sbjct: 106 E---------VLSGNTKMLYVAPETLNKEDNLAFLKQA----KLSFIAVDEAHCISDWGH 152
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + + +PIIALTATA P V+ DI++ L N F++S R NL+
Sbjct: 153 DFRPEYRNIRYVANQQLGRVPIIALTATATPRVQLDILNNLDINDA-TTFQSSFNRPNLY 211
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y++ + K+ A+ K+ I+ L K+ + GI+YC++R+ +LA L
Sbjct: 212 YEIRY----KEEQAN-KQLIK--LIKE-QPQIMGIVYCQSRKQVDELAALLNLNDIKAAP 263
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ + R + QE+F++ + NVI ATI+FGMGID +VRFV+H+ MP S+ AYYQE+G
Sbjct: 264 YHAGLDANVRVKNQEAFLQKQYNVIVATIAFGMGIDTPDVRFVIHYDMPKSLEAYYQETG 323
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
RAGRD L S C + ++ LE + K+ + +RE+
Sbjct: 324 RAGRDSLPSTCLMLYNPEDFIRLERLNKSKPNGEREK 360
>gi|146313606|ref|YP_001178680.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
gi|145320482|gb|ABP62629.1| ATP-dependent DNA helicase RecQ [Enterobacter sp. 638]
Length = 609
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 205/385 (53%), Gaps = 65/385 (16%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ I S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACINSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQDVMAGCR--TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ ++P +ALTATA+ + +QDI+ +L N P+ + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPALPFMALTATADDTTRQDIVRLLGLNDPFS--QVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QTRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHS 395
I +YYQE+GRAGRDGL + +++
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYD 341
>gi|356532786|ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Glycine max]
Length = 732
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 199/385 (51%), Gaps = 47/385 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
++ L L+ FG+ F+ ++Q AI+ +L D F MPTG + + A ++
Sbjct: 23 KETLVKLLRWHFGYPDFR-DMQLDAIQAVL-SGKDCFCLMPTGGGKSMCYQIPALAK--- 77
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
A +L + P+++ + ++ + E + S +T
Sbjct: 78 ---AGIVL---------VVCPLIALM-------ENQVMALKEKGIAAEFLSSTKTTDAKV 118
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I E+L KP +LLYVTPE T F L + L I +DEAHC+S WGHDFR
Sbjct: 119 KIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLNLIAIDEAHCISSWGHDFR 178
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P+YR+L LR + +PI+ALTATA P V++D++ L+ P + K+S R N++Y+V
Sbjct: 179 PSYRKLSSLRSHLPD-VPILALTATAVPKVQKDVVESLQMQNPL-MLKSSFNRPNIYYEV 236
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ DLL D+YA + + K LG + C I+YC R DL+ L +
Sbjct: 237 RYKDLLDDAYADLSNTL-KSLG-----DVCAIVYCLERSMCDDLSTNLSQNGISCAAYHA 290
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+N R+ V + ++ +I V+ AT++FG ++VR V H+ +P S+ A+YQESGRAG
Sbjct: 291 GLNNKMRTSVLDDWISSKIKVVVATVAFG-----KDVRIVCHFNIPKSMEAFYQESGRAG 345
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIK 407
RD L S +Y+ +K +E++++
Sbjct: 346 RDQLPSRSLLYYGVDDRKRMEFILR 370
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 211/401 (52%), Gaps = 57/401 (14%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG+D+F+ LQ+ I+ +L D+FV MPTG G + + + G +
Sbjct: 9 FGYDTFR-PLQENIIQDVL-NKKDVFVLMPTGG----GKSLCYQLPSLLMEGVTVV---- 58
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR--LV 161
+SP++S ++ + D+ L + + T + + + ++ L+
Sbjct: 59 -------VSPLIS--LMKDQVDR---------LLSHGIAAAYMNSTLDNSEMSHVKDSLI 100
Query: 162 KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
+ ++ LLYV PER S L+ L + N + VDEAHC+S+WGHDFRP YR+LG L
Sbjct: 101 RGKLDLLYVAPERLAMPS---TLKLLAKVN-VNLFAVDEAHCISQWGHDFRPEYRKLGAL 156
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
R N +P+IALTATA P+V +DI L + K + S RSNL+Y+V + ++
Sbjct: 157 RSGFPN-VPLIALTATATPAVARDITKQLNMVRSEK-YVASFNRSNLYYEVKSGE---NA 211
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHERSR 331
+ ++ + +CGIIYC+TR+ LA L++ ++ R R
Sbjct: 212 DQQITSYLR------SHPESCGIIYCQTRKSVEGLAGRLKKLGVNAAFYHAGMSDELRHR 265
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
QE F+ G I V+ AT++FGMGID+ NVRFV+H+ +P+ + +YYQ++GR GRDG C
Sbjct: 266 AQEKFLDGTIRVVVATVAFGMGIDKSNVRFVMHYDLPADLESYYQQTGRGGRDGQPCDCI 325
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
++ +Y I+ S+K+E+ E+ M++YCE
Sbjct: 326 LFFKRGDWYKQQYFIE-QMSSKKER-EIALSKLRHMMDYCE 364
>gi|325280334|ref|YP_004252876.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
gi|324312143|gb|ADY32696.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
Length = 727
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/392 (35%), Positives = 206/392 (52%), Gaps = 51/392 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L AKLK FGFD FK ++AI +L ++ FV MPTG G + + + G
Sbjct: 7 LHAKLKEYFGFDHFKG--NQEAIIKNVLAGNNTFVLMPTGG----GKSLCYQLPALLLEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
I ISP+++ ++ + D + + + S TK E +
Sbjct: 61 TAII-----------ISPLIA--LMKNQVDAMRSFSAAEGVAH--FLNSSLTKNEILNVK 105
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E+ ++ + K+LYV PE ES L+ + K+++ VDEAHC+SEWGHDFR Y
Sbjct: 106 ED--ILSGKTKMLYVAPESLTKESNVEFLKKI----KISFFAVDEAHCISEWGHDFRTEY 159
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--I 273
R++ + + G + PIIALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 160 RKIRPIVEEIGKA-PIIALTATATPKVQNDIQKNLDMMDA-QVFKSSFNRPNLYYEVRPK 217
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRK 323
D+ KD + +FI+ GK GIIYC +R+ +LA+ L
Sbjct: 218 QGDVTKD----IIKFIKNHEGK------SGIIYCLSRKKVEELAEVLSINGIKAAPYHAG 267
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ RS Q+ F+ E++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGR
Sbjct: 268 MDASTRSTNQDRFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGR 327
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
DG + C Y+S + LE ++ ++E
Sbjct: 328 DGGEGICLTYYSFKDIQKLEKFMQGKPIAEQE 359
>gi|160886583|ref|ZP_02067586.1| hypothetical protein BACOVA_04594 [Bacteroides ovatus ATCC 8483]
gi|423289735|ref|ZP_17268585.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|156108468|gb|EDO10213.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
gi|392667446|gb|EIY60956.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 608
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 210/406 (51%), Gaps = 60/406 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 11 LKTYFGYDSFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +LR
Sbjct: 65 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENV----QLR 102
Query: 160 --LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
V+ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y +
Sbjct: 103 RACVEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQ 157
Query: 218 LGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+G L +QF IPI+ALTATA+ ++DI+ L N P ++F +S R N+ V
Sbjct: 158 MGVLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RIFISSFDRPNISLTVKRGF 214
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 215 QAKEKNKAILEFIHRHGGES------GIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLST 268
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL
Sbjct: 269 QHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGL 328
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S +++S + ++ T +++ Q + + M +Y E
Sbjct: 329 PSSTVLFYSLG-----DLILLTKFASESNQQSINLEKLQRMQQYAE 369
>gi|255690572|ref|ZP_05414247.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|423301599|ref|ZP_17279622.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|260624034|gb|EEX46905.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|408471592|gb|EKJ90123.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 726
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 207/400 (51%), Gaps = 54/400 (13%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSAR 87
GK++ LT +LK FGF+ FK ++AI LL D FV MPTG G + +
Sbjct: 2 AGKIN---LTDELKKYFGFNKFKG--NQEAIIQNLLSGKDTFVLMPTGG----GKSLCYQ 52
Query: 88 SRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ G + ISP+++ + V + + + I
Sbjct: 53 LPSLLMEGTAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGIAHFIN 93
Query: 148 KTENKAILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+ NK +E++R ++ + KLLYV PE E L+ + K+++ VDEAHC+S
Sbjct: 94 SSLNKGAIEQVRSDILAGKTKLLYVAPESLTKEENVEFLRSV----KISFYAVDEAHCIS 149
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
EWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 150 EWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNR 207
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL+Y+V + A++ I K + N GIIYC +R+ +LA+ L+
Sbjct: 208 PNLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKRVEELAEILQANGI 259
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YY
Sbjct: 260 NARPYHAGMDSVTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYY 319
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
QE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 320 QETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|423283377|ref|ZP_17262261.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|404581095|gb|EKA85801.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 601
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 213/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T R++ + S +TEN +
Sbjct: 59 -----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GI+YC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIVDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+ Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RNETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMAS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|402218656|gb|EJT98732.1| ATP-dependent DNA helicase [Dacryopinax sp. DJM-731 SS1]
Length = 966
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 203/386 (52%), Gaps = 44/386 (11%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG+ ++K ++K I +R D+ V PTG +G + +IP AD
Sbjct: 59 LTHTFGYTAYKG--RQKEIVEAAVRGADVLVVAPTG----MGKSLC----FQIPAIADQF 108
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
V +SP+L+ + T R + + S ++ E I ++L
Sbjct: 109 GVSIV------VSPLLALM-------SNQVTTLREKGVNVASLCSDTSQAEKSRITKDLS 155
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
PRI+LLY+TPE+ + F L+ + ++ ++VDEAHC++EWG DFRP YR LG
Sbjct: 156 SGHPRIRLLYITPEKLASAEFSKLMMKVYDNRQVMRLIVDEAHCITEWGWDFRPEYRTLG 215
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
RQ +PI+ALTA+A +V+ DI+S LK + + + F R NLFY++ F +
Sbjct: 216 NFRQ-KYPEVPIMALTASATAAVQDDIVSSLKMSSEHLLRVVHPFNRKNLFYEIKF---V 271
Query: 279 KDSYAH-----VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
++ H + ++I K + +A +CGIIYCR R +A LRRK
Sbjct: 272 ANTEPHLIMQDLVDYILKLTERRGRA-SCGIIYCRARAACDQVAGFLRRKGITAKPYHRG 330
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
V+ + + ++ ++ V+ AT++FGMGID+ +VR+++H+ +P S YYQE+GRAGR
Sbjct: 331 VSPKVLATTLQEWLDDKVEVVVATVAFGMGIDKPDVRYILHYDLPKSFEGYYQETGRAGR 390
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTD 409
DG S C +Y+S + ++++ D
Sbjct: 391 DGSASKCILYYSIEDARRAMFLVQQD 416
>gi|313149548|ref|ZP_07811741.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313138315|gb|EFR55675.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 734
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 210/409 (51%), Gaps = 68/409 (16%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVG 81
+ GK++ LT +LK FGFD+FK ++ I LL +D FV MPTG +
Sbjct: 8 KMAGKIN---LTDQLKKYFGFDNFKG--NQEPIIQNLLDGNDTFVLMPTGGGKSLCYQLP 62
Query: 82 SVVSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDL 136
S++ + + I P + N N +G I SS +K +I RSD
Sbjct: 63 SLLMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD- 115
Query: 137 YQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYI 196
I++G+TK LLYV PE E L+ + K+++
Sbjct: 116 -----ILAGKTK------------------LLYVAPESLTKEENVEFLRSV----KISFY 148
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPY 256
VDEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +
Sbjct: 149 AVDEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDAH 207
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
VFK+S R NL+Y+V + +V + I K + N GIIYC +R+ +L
Sbjct: 208 -VFKSSFNRPNLYYEV------RPKTQNVDKDIIKFI--KNNPEKSGIIYCLSRKKVEEL 258
Query: 317 ADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A+ L+ ++ R++ Q++F+ +I+VI ATI+FGMGID+ +VR+V+H+
Sbjct: 259 AEILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYD 318
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+P S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 319 IPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 367
>gi|29349252|ref|NP_812755.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|380693604|ref|ZP_09858463.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
gi|383120164|ref|ZP_09940895.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|29341160|gb|AAO78949.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837322|gb|EES65422.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 726
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/409 (33%), Positives = 207/409 (50%), Gaps = 72/409 (17%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ LT +LK FGF+ FK ++AI LL D FV MPTG + S+
Sbjct: 2 AGKIN---LTDELKKYFGFNKFKG--NQEAIIQNLLDGKDTFVLMPTGGGKSLCYQLPSL 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I RSD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVRSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+TK LLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKTK------------------LLYVAPESLTKEENVDFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QV 200
Query: 259 FKTSTFRSNLFYDV--IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL 316
FK+S R NL+Y+V +++ KD +K N + GIIYC +R+ +L
Sbjct: 201 FKSSFNRPNLYYEVRAKTNNIDKDIIKFIK----------NNSEKSGIIYCLSRKKVEEL 250
Query: 317 ADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWG 366
A+ L+ ++ R++ Q+ F+ ++ VI ATI+FGMGID+ +VRFV+H+
Sbjct: 251 AEILQANGINARPYHAGMDSMTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYD 310
Query: 367 MPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+P S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 311 IPKSLEGYYQETGRAGRDGGEGQCLTFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|429740154|ref|ZP_19273860.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
gi|429154163|gb|EKX96911.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
Length = 725
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 204/394 (51%), Gaps = 55/394 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT KLK FGFD FK + Q+ IR+ LL +D FV MPTG + S++ + +
Sbjct: 7 LTEKLKQYFGFDKFKGD-QETIIRN-LLAGNDTFVLMPTGGGKSLCYQLPSLLMEGTGIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + N V NG + YL +K+SI+
Sbjct: 65 ISPLIALMKN-QVDVMNGMSEHGCVAHYLNSSLNKSSILE-------------------- 103
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
++E++R + + KLLYV PE E L+ + K+++ +DEAHC+SEWGHDF
Sbjct: 104 --VMEDVR--QRKTKLLYVAPESLSKEENIEFLKTI----KVSFYAIDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR + G + PIIALTATA V+ DI L + K FK+S R NL+Y+
Sbjct: 156 RPEYRNIRPTIMKIGKA-PIIALTATATDKVRSDIKKNLGISDA-KEFKSSFNRVNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V +D ++ FI++ A+ GIIYC +R+ +LA L+
Sbjct: 214 V--RSKTQDVDRNIIMFIKQ------HADKSGIIYCLSRKKVEELAAVLQANNIKAAPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + C ++S + LE I + +++
Sbjct: 326 GRDGGEGLCIAFYSNQDLRKLEKFIDGKSGAEQD 359
>gi|427385455|ref|ZP_18881762.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425727099|gb|EKU89960.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 727
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 204/401 (50%), Gaps = 69/401 (17%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ + V
Sbjct: 8 LTDQLKKYFGFDTFKG--NQEAIIQNLLAGNDTFVLMPTGGGKSLCYQLPSLMMEGTGVV 65
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I +SD I+SG+
Sbjct: 66 ISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVKSD------ILSGK 113
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + +++ VDEAHC+SE
Sbjct: 114 TK------------------LLYVAPESLTKEENVEFLKTVT----ISFYAVDEAHCISE 151
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 152 WGHDFRPEYRRIRPIINEIGKA-PVIALTATATPKVQHDIQKNLGMVDA-EVFKSSFNRP 209
Query: 267 NLFYDV--IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
NL+Y+V +++ +D +K N GIIYC +R+ +LA+ L+
Sbjct: 210 NLYYEVRPKTNNVDRDIIKFIK----------NNQEKSGIIYCLSRKKVEELAEILQANG 259
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ Y
Sbjct: 260 INARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGY 319
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 320 YQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 360
>gi|373461301|ref|ZP_09553043.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
gi|371952855|gb|EHO70688.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
Length = 725
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 202/381 (53%), Gaps = 53/381 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD FK + ++AI L+ HD FV MPTG G + + + G
Sbjct: 7 LTRQLKHYFGFDKFKGD--QEAIIQNLMSGHDTFVLMPTGG----GKSLCYQLPSLLMEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ ISP+++ ++ ++ G S+ + + S K + +
Sbjct: 61 TAIV-----------ISPLIA-----LMKNQVDVINGLSEETGVAHYLNSSLNKAAVQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE E L+ + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 MDDIR--SGRTKLLYVAPESLNKEESIDFLKSV----KISFYAIDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR + G++ P+IALTATA V+ DI L K FK+S R NL+Y+V
Sbjct: 159 YRNIRPTINKIGDA-PVIALTATATDKVRSDIKKSLAIIDA-KEFKSSFNRPNLYYEVRQ 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
D++ K + +FI + GK GIIYC +R+ +L++ L+
Sbjct: 217 KSDEVDK----QIIKFIRQHEGK------SGIIYCLSRKKVEELSEVLKANEIKAAPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLE 403
RDG + C ++++ K LE
Sbjct: 327 RDGGEGLCIAFYAQKDLKKLE 347
>gi|422015295|ref|ZP_16361894.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
gi|414099460|gb|EKT61101.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
Length = 608
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 217/417 (52%), Gaps = 59/417 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ Q+ IR IL D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFRPG-QEAVIRAIL-DNRDSLVLMPTGG----GKSLCYQVPALVKDGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R + S QT E + +++
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRLHGINAACLNSSQTPQEQREVMDSC- 111
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +KLLYV PER +T+ Y L L +N +A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 112 -AQGNLKLLYVAPERLLTD---YFLSQLANWN-IALLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LRQ + +P++ALTATA+ + + DII +L + P + + S+F R N+ Y ++
Sbjct: 167 QLRQHFPD-VPVMALTATADETTRADIIRLLALDNP--LVQVSSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y +++ FI+ GK GI+YC +R + A+ L+++ ++
Sbjct: 219 -EKYKPLEQLWFFIKAQKGK------AGIVYCNSRNKVEETAERLQKRGLSVAAYHAGLD 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ++F++ + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG
Sbjct: 272 SQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDG 331
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ +++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 332 VEAEAILFYDPADMAWLRRCLEEKPAGVQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 152/253 (60%), Gaps = 19/253 (7%)
Query: 165 IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQF 224
+KLLYV PER V++SF LL+ + + ++ IVVDEAHCVSEWGHDFRP YR+L LR+
Sbjct: 106 VKLLYVAPERLVSDSFTALLETIHQTVGISSIVVDEAHCVSEWGHDFRPDYRQLSRLRE- 164
Query: 225 TGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAH 284
+IP+IALTATA V+ DI L KP+ V S R NL+Y+VI K S +
Sbjct: 165 RFPTIPVIALTATATHRVRTDITEQLSLKKPF-VHVASFNRPNLYYEVIEKSRGKVSLSE 223
Query: 285 VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSRVQE 334
+ +I++ G GIIYC +R+ LA L ++ R+ Q
Sbjct: 224 LTGYIKETEGS-------GIIYCMSRKQVEKLASELNENGISALPYHAGLSNETRTDHQT 276
Query: 335 SFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYH 394
F+R ++ ++ AT++FGMGI++ +VRFV+H+ +P +I YYQESGRAGRDG + C ++
Sbjct: 277 RFIRDDVQIMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFF 336
Query: 395 SEHSKKSLEYVIK 407
S K ++ I+
Sbjct: 337 SPGDIKQADWFIQ 349
>gi|198276172|ref|ZP_03208703.1| hypothetical protein BACPLE_02361 [Bacteroides plebeius DSM 17135]
gi|198270984|gb|EDY95254.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 727
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/394 (34%), Positives = 206/394 (52%), Gaps = 55/394 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
L A LK FGFD+FK ++AI LL D FV MPTG + S++ + +
Sbjct: 7 LVAALKKYFGFDTFKG--NQEAIIRNLLSGKDTFVLMPTGGGKSLCYQLPSLLMDGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + N RN ++ F +S+ +D + + I++G+TK
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGIAHFI------NSSLTKSATDQVKAD-IMAGKTK--- 114
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
LLYV PE E L+H+ K+++ VDEAHC+SEWGHDF
Sbjct: 115 ---------------LLYVAPESLTKEENVDFLRHV----KISFYAVDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YRR+ + G + P+IALTATA P VK DI L + F++S R NL+Y+
Sbjct: 156 RPEYRRIRPIINEIGKA-PVIALTATATPKVKMDIQKNLGMMDATE-FRSSFNRPNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL----------ADALR 321
V + A+V + I K + K N+ + GIIYC +R+ +L A A
Sbjct: 214 V------RAKSANVDKDIIKFI-KQNEGKS-GIIYCLSRKKVEELTEILLANGIKARAYH 265
Query: 322 RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R+ Q++F++ +I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGMDSATRNGNQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRDG + C ++S + LE ++ +++E
Sbjct: 326 GRDGGEGQCITFYSNKDLQKLEKFMQGKPISEQE 359
>gi|375359515|ref|YP_005112287.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|301164196|emb|CBW23754.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
Length = 607
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 214/409 (52%), Gaps = 56/409 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK FG+DSF+ LQ++ I H L+ D V MPTG G + + +
Sbjct: 6 QMIQTLKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLME 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S K + T R++ + S +TEN +
Sbjct: 60 GTAIV-----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANL 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP
Sbjct: 102 RRAC--ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPE 154
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y R+G LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 155 YARMGFLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVK 211
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + +FI + G+ GI+YC +R T +A L++
Sbjct: 212 RGYQPKEKSKAIIDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAG 265
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGR
Sbjct: 266 LSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG+ S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 DGMASDTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 369
>gi|262404934|ref|ZP_06081486.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
gi|262348773|gb|EEY97914.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC586]
Length = 620
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 130/389 (33%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG + + A R G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGGGKSLCYQIPALVR----EGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S T+ E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLTREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/415 (33%), Positives = 210/415 (50%), Gaps = 52/415 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ + FG SF+ Q + I LL +D FV MPTG G + + +
Sbjct: 659 QEMAELFRTKFGLQSFRPN-QLQVINATLL-GNDCFVLMPTGG----GKSLCYQLPALLT 712
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI---VSGQ-TKT 149
G + +SP+ K+ I+ + L L++ +SG +
Sbjct: 713 NGVTIV-----------VSPL-----------KSLILDQVNKLSSLDIEAAHLSGNISYA 750
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E + I +L+ +P++KLLYVTPE+ + F +L L +LA V+DEAHCVS WG
Sbjct: 751 EEQRIYYDLQSPRPKMKLLYVTPEKISSSGRFQNVLSGLHAMKQLARFVIDEAHCVSAWG 810
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y++L LR QF SIPI+ALTATA P V+ D+I L+ K F S R N
Sbjct: 811 HDFRPDYKKLSVLREQFP--SIPIMALTATANPRVRVDVIKQLRLKSDTKWFLCSFNRPN 868
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
L Y V K A +E I+ K +A+ GI+YC ++ LA ++
Sbjct: 869 LKYIV----RPKQGVATKQEIIDLIKKKYPRAS--GIVYCLAKKDCDQLAAEMKSAGISA 922
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +R Q+ ++ + V+ ATI+FGMGID+ +VR+V+H +P SI YYQE
Sbjct: 923 KSYHAGLSDSQRESTQKDWIADKTKVVCATIAFGMGIDKPDVRYVIHHSIPKSIEGYYQE 982
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG S C +Y++ ++ D+S E ++ N M++YCE
Sbjct: 983 AGRAGRDGDFSTCILYYNYSDMLRFRKMMDFDSSIPFEAKKVHVNNLFRMVDYCE 1037
>gi|281421757|ref|ZP_06252756.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281404252|gb|EFB34932.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 726
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 199/382 (52%), Gaps = 55/382 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGFDSFK + Q+ IR+ L+ +D FV MPTG + S++ + +
Sbjct: 7 LTGQLKHYFGFDSFKGD-QEAIIRN-LMSGNDTFVLMPTGGGKSLCYQLPSLIMEGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + N V N + YL +K++I ++D I++G T
Sbjct: 65 ISPLIALMKN-QVDVINSLSESDGVAHYLNSSLNKSAIEKVKND------ILNGTT---- 113
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
KLLYV PE E L+ + K+++ +DEAHC+SEWGHDF
Sbjct: 114 --------------KLLYVAPESLTKEDNVEFLKTV----KISFYAIDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YRR+ + G + P+IALTATA V+ DI L K FK+S R NL+Y+
Sbjct: 156 RPEYRRIRPIINEIGVA-PVIALTATATDKVRTDIKKNLGIMDA-KEFKSSFNRPNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V + KD + FI + GK GIIYC +R+ +LA+ L+
Sbjct: 214 VRPKN--KDIDRQIIMFIRQHKGK------SGIIYCLSRKKVEELAEVLKANEIKAAPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C +++ + LE
Sbjct: 326 GRDGGEGICIAFYARKDLRKLE 347
>gi|237723404|ref|ZP_04553885.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|229447926|gb|EEO53717.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
Length = 608
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 210/406 (51%), Gaps = 60/406 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 11 LKTYFGYDSFR-PLQEEIIRHIL-NKRDALVLMPTGG----GKSICYQLPALLCKGTAVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +LR
Sbjct: 65 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENV----QLR 102
Query: 160 --LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
V+ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y +
Sbjct: 103 RACVEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQ 157
Query: 218 LGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+G L +QF IPI+ALTATA+ ++DI+ L N P ++F +S R N+ V
Sbjct: 158 MGVLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RIFISSFDRPNISLTVKRGF 214
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 215 QAKEKNKAILEFIHRHGGES------GIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLST 268
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL
Sbjct: 269 QHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGL 328
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S +++S + ++ T +++ Q + + M +Y E
Sbjct: 329 PSSTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 369
>gi|53714712|ref|YP_100704.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|52217577|dbj|BAD50170.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
Length = 607
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 214/409 (52%), Gaps = 56/409 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK FG+DSF+ LQ++ I H L+ D V MPTG G + + +
Sbjct: 6 QMIQTLKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLME 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S K + T R++ + S +TEN +
Sbjct: 60 GTAIV-----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANL 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP
Sbjct: 102 RRAC--ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPE 154
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y R+G LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 155 YARMGFLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVK 211
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + +FI + G+ GI+YC +R T +A L++
Sbjct: 212 RGYQPKEKSKAIIDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAG 265
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGR
Sbjct: 266 LSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG+ S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 DGMASDTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 369
>gi|336417153|ref|ZP_08597482.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423298263|ref|ZP_17276322.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|335936778|gb|EGM98696.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392663679|gb|EIY57227.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 608
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/406 (33%), Positives = 210/406 (51%), Gaps = 60/406 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 11 LKTYFGYDSFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +LR
Sbjct: 65 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENV----QLR 102
Query: 160 --LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
V+ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y +
Sbjct: 103 RACVEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQ 157
Query: 218 LGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+G L +QF IPI+ALTATA+ ++DI+ L N P ++F +S R N+ V
Sbjct: 158 MGVLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RIFISSFDRPNISLTVKRGF 214
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 215 QAKEKNKAILEFIHRHGGES------GIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLST 268
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL
Sbjct: 269 QHRDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGL 328
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S +++S + ++ T +++ Q + + M +Y E
Sbjct: 329 PSDTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 369
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS
8797]
Length = 1373
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 143/428 (33%), Positives = 210/428 (49%), Gaps = 57/428 (13%)
Query: 24 QDRKGGKVS-EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGS 82
Q GGK EL+ KL +F F+ Q++AI + L D+FV MPTG +
Sbjct: 596 QANPGGKYPWSGELSNKLHEVFKLPGFRSN-QEEAI-NATLEGKDVFVLMPTGGGKSLCY 653
Query: 83 VVSARSRVRIPPGADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLY 137
+ A + +G R ISP++S +L R+ K + + R
Sbjct: 654 QLPA-----------VVRSGKTRGTTIVISPLISLMQDQVEHLLARNIKACMFSSRG--- 699
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYI 196
T E + + + L+Y++PE + +E ++ L LA +
Sbjct: 700 ---------TAEERRQTFN--LFIHGLLDLIYISPEMISASEQCKKAIRKLHEDGNLARV 748
Query: 197 VVDEAHCVSEWGHDFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKP 255
V+DEAHCVS WGHDFRP Y+ L R+F IP++ALTATA V+ DII L+ P
Sbjct: 749 VIDEAHCVSNWGHDFRPDYKELKIFKREFP--DIPMMALTATASEQVRMDIIHNLELKNP 806
Query: 256 YKVFKTSTF-RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTT 314
VF +F R+NLFY+V K S + E ++ K N GIIYC ++
Sbjct: 807 --VFLKQSFNRTNLFYEV-----KKKSKNTIYEICDEI--KRKFRNQTGIIYCHSKNSCE 857
Query: 315 DLADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
A L+R + ER ++Q+S+ EI VI AT++FGMGID+ +VRFV H
Sbjct: 858 QTATQLQRNRIKCAYYHAGLEPEERFKIQKSWQTDEIQVICATVAFGMGIDKPDVRFVYH 917
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNY 424
+ +P ++ YYQE+GRAGRDG SYC Y S ++++ +I+ D + RE E
Sbjct: 918 FTIPRTLEGYYQETGRAGRDGKYSYCTTYFSFRDIRNMQTMIQKDENLDRENKEKHLAKL 977
Query: 425 LSMLEYCE 432
+L YC+
Sbjct: 978 QQVLGYCD 985
>gi|328866871|gb|EGG15254.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
fasciculatum]
Length = 834
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 202/389 (51%), Gaps = 46/389 (11%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG + LQK AI IL R D FVS+PTG G + + I G +
Sbjct: 383 KTVFGVGELRA-LQKDAINAILYR-RDTFVSLPTGG----GKSLCFQLPALIDAGLTVV- 435
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
+SP+L+ +D+ + + R ++ SG + +E +EEL
Sbjct: 436 ----------VSPLLA-----LMNDQVTKLRQRG--IPAAVLNSGISVSERTRTMEELEN 478
Query: 161 VKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
+ IKLLYVTPER V+E F + +L +V+DEAHC+SEWGHDFR YR+L
Sbjct: 479 PQGSIKLLYVTPERLVSEDFAKRMARWHYQGRLRRLVIDEAHCISEWGHDFRSDYRKLSS 538
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLLK 279
R+ T +PI+ALTATA V+ DI + L ++ V TF R+NL Y V +
Sbjct: 539 FRK-TFPHVPIVALTATATDYVEHDIKNQLGISRDDVVNVRGTFQRNNLRYAV------R 591
Query: 280 DSYAH---VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNK 326
D A V IE + K + GI+YC T +LA LR ++
Sbjct: 592 DKPASPIGVAMDIESFI-KARYPTSSGIVYCATSVECENLASHLRDVGLSAHHYYASLST 650
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R +Q+++++G+I VI T +FGMGID+ + RFV+H MP SI +YYQ +GRAGRDG
Sbjct: 651 PTRLEIQDNWIKGKIKVICTTTAFGMGIDKPDTRFVIHHSMPQSIESYYQHTGRAGRDGQ 710
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S +Y S+ KK +E ++K TST+ +
Sbjct: 711 LSDSILYFSDIDKKRMEKLMKPTTSTQDQ 739
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 208/404 (51%), Gaps = 51/404 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LLR +D FV MPTG G + + + G +
Sbjct: 585 FGLKSFRPN-QLQVINATLLR-NDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 634
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELRLVK 162
ISP+ S + + + + +S +SG + AI +L
Sbjct: 635 -------ISPLKSLIFDQINKLASLDICSKS--------LSGDVAMADVMAIYRDLESHP 679
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F +L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 680 PMVKLLYVTPEKISSSARFQDILDTLNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGIL 739
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD---DLL 278
++ N +P IALTATA P V+ DI+S L K K F +S RSNL Y V+ +
Sbjct: 740 KKRFPN-VPTIALTATATPRVRLDILSQLNL-KNCKWFLSSFNRSNLRYKVLPKKGASTI 797
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----RRKVNKH------E 328
D A+++ N+ GIIYC +R+ ++A + R V H E
Sbjct: 798 DDMSAYIRT---------KPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTDSE 848
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ ++ +I VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG +
Sbjct: 849 REGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEVA 908
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C +Y++ L+ ++ D + + ++ N ++ YCE
Sbjct: 909 DCILYYNYSDMLRLKKMMDGDKALQYNVKKMHIDNLYRIVGYCE 952
>gi|423261207|ref|ZP_17242109.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267342|ref|ZP_17246324.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|387774449|gb|EIK36560.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392698045|gb|EIY91228.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
Length = 601
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 213/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T R++ + S +TEN +
Sbjct: 59 -----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GI+YC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIIDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+ Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RNETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 220/417 (52%), Gaps = 50/417 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIP 93
++ A L+ +F F+ Q +AI + L D FV MPTG SL + S
Sbjct: 437 DVKAALRDIFNLRGFRPN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPSV------- 487
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP+LS DD+ + RS + I E +
Sbjct: 488 -----VQSGRTRGVTVVISPLLS-----LMDDQVGQL--RSLSVKAHFINGSLKAAERRQ 535
Query: 154 ILEELR--LVKPRIKLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEWGH 209
ILE L+ V+ +I+LLYVTPE V +S L L+ L R K A +V+DEAHCVS+WGH
Sbjct: 536 ILEYLQDPRVEDQIQLLYVTPE-MVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGH 594
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG+ R+ F G +P++ALTATA +VK D+I L + K F S R NL
Sbjct: 595 DFRPDYKELGDFRRHFPG--VPLMALTATATQNVKVDVIHNLGMDGCEK-FTQSFNRPNL 651
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V +D ++ + I+ GK GIIYC +R++ +A L K
Sbjct: 652 TYEVRVKGNHEDVLENIAKIIDFHYGK------TGIIYCLSRKNCEKVAKDLCTKYHVKA 705
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ +R RVQ + G+ NVI ATI+FGMGID+ +VRFV+H +P S+ YYQE
Sbjct: 706 THYHAGMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQE 765
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTK--REQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +++ ++ +I + + + R+Q + + + ++++C+
Sbjct: 766 TGRAGRDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQ 822
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 144/449 (32%), Positives = 220/449 (48%), Gaps = 57/449 (12%)
Query: 2 AEGESKDASSAVG--KSSSLTGNQQDRKGGKVSE-QELTAKLKALFGFDSFKCELQKKAI 58
+E E+K A+ +G ++ LTG D G +++ + + FG +F+ Q +AI
Sbjct: 438 SEVENKPATKFIGNIRNDGLTG---DFDGTSYPHSRQMMSFFRQKFGLFNFRPN-QLQAI 493
Query: 59 RHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSF 118
LL D F+ MPTG G + + + PG + +SP+
Sbjct: 494 NAALL-GFDCFILMPTGG----GKSLCYQLPALLTPGITIV-----------VSPL---- 533
Query: 119 YLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELRLVKPRIKLLYVTPER 174
K+ I+ L L++ + QT ++ AI E+ P +KLLYVTPE+
Sbjct: 534 -------KSLILDQTQKLISLDIPAAHMSGDQTDSQTDAIYREMSKKDPVLKLLYVTPEK 586
Query: 175 -AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIA 233
+ ++ L L L V+DEAHCVS+WGHDFRP Y++L LR N +P +A
Sbjct: 587 LSASQKLCNALTALYERGLLGRFVIDEAHCVSQWGHDFRPDYKKLQVLRVKYPN-VPTMA 645
Query: 234 LTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCL 293
LTATA P V+ DI+ L P K F +S R NL Y VI K++ V I+
Sbjct: 646 LTATATPRVRTDILHQLGMQSP-KWFMSSFNRPNLRYSVISKKG-KNASDEVIGLIKAKF 703
Query: 294 GKDNKANNCGIIYCRTREHTTDLADALR----------RKVNKHERSRVQESFMRGEINV 343
D CGI+YC +R A+ ++ ++ +RS +Q ++ +I V
Sbjct: 704 KDD-----CGIVYCLSRNDCDTYAEQMKINGIKAMGYHAGLSDKQRSDIQGRWISEQIKV 758
Query: 344 ITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+ ATI+FGMGID+ NVRFV+H +P SI YYQESGRAGRD + C ++++
Sbjct: 759 VCATIAFGMGIDKPNVRFVIHASLPKSIEGYYQESGRAGRDSENAECILFYNYADMYRHR 818
Query: 404 YVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+I+ D ++ + + N M+ +CE
Sbjct: 819 KMIEMDVASNKTAQKTHMDNLFKMVTFCE 847
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 205/406 (50%), Gaps = 42/406 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ F +SF+ Q +A+ + L D+FV MPTG + + A +
Sbjct: 535 LRETFKLESFRSN-QLEAV-NATLSGEDVFVLMPTGGGKSLCYQLPA-----------LV 581
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+G+ R +SP++S +D ++ + + +I S T E + + + L
Sbjct: 582 QSGSTRGTTVVVSPLIS----LMQDQVEHLIANK---IKAGMINSKGTVQERRQMFDLLN 634
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ L+Y++PE + + L+ L R KLA IVVDEAHCVS WGHDFRP Y+ L
Sbjct: 635 --SGDLDLIYLSPEMISASNQARSSLKRLHRIGKLARIVVDEAHCVSSWGHDFRPDYKTL 692
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++ + IP++ALTATA V DI+ L NKP + FK S R+NLFY V
Sbjct: 693 NYFKKEYPD-IPVMALTATANEHVVMDIVHNLGLNKP-QCFKQSFNRTNLFYKVQVK--- 747
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ H+ E G+ N GIIYC ++ + L + + +
Sbjct: 748 --TKTHLDEITNMINGQ--YRNQTGIIYCHSKNSCEQTSARLIQNGIKCSFYHAGMTTED 803
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R VQ ++ +I VI ATI+FGMGID+ +VRFV+H +P ++ YYQE+GRAGRDG S
Sbjct: 804 RFAVQSAWQSDKIRVICATIAFGMGIDKPDVRFVIHLTVPRTLEGYYQETGRAGRDGNHS 863
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
C +++S ++L+ +I+ D RE E +++YCE G
Sbjct: 864 DCIMFYSYRDVRTLQTMIQKDVDLTRENKENHLNKLRKVIQYCENG 909
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 227/450 (50%), Gaps = 68/450 (15%)
Query: 8 DASSAVGKSSSLTGNQQDRKG-GK-VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRT 65
D+ + +++SLT NQ+ G GK + E+ +KL+ +F F+ Q+ A+ + L
Sbjct: 558 DSYYELEEANSLTYNQEQNNGTGKHLWTNEVKSKLQEVFKLPGFRPN-QEDAV-NATLSG 615
Query: 66 HDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSF-----YL 120
D+FV MPTG +S P I +GN + +SP++S +L
Sbjct: 616 KDVFVLMPTGG---------GKSLCYQLPA--IIKSGNTKGTTIVVSPLISLMQDQVDHL 664
Query: 121 RFRDDKTSIVTGRSDLYQ----LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPER-A 175
++ K S+ + + Q L + G + L+Y++PE +
Sbjct: 665 LAKNIKASMFSSKGTADQRRQTFNLFIHG------------------LLDLIYISPEMIS 706
Query: 176 VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGN--SIPIIA 233
+E + L LA IVVDEAHCVS WGHDFRP Y+ EL+ F G +IP++A
Sbjct: 707 ASEQCKRAIAKLHEDGNLARIVVDEAHCVSNWGHDFRPDYK---ELKFFKGEYPNIPMMA 763
Query: 234 LTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLLKDSYAHVKEFIEKC 292
LTATA V+ DII LK P VF +F R+NL+Y++I K++ + + I++
Sbjct: 764 LTATASEQVRMDIIHNLKLKDP--VFLKQSFNRTNLYYEIIKKS--KNTIFEMSDDIKRR 819
Query: 293 LGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSRVQESFMRGEIN 342
N GIIYC ++ + + R + +R +VQ+++ E+
Sbjct: 820 F-----RNQTGIIYCHSKNSCEQTSAQMERAGIKCAYYHAGMEPDDRLKVQKAWQADEVQ 874
Query: 343 VITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSL 402
VI AT++FGMGID+ +VRFV H+ +P ++ YYQE+GRAGRDG SYC Y+S +++
Sbjct: 875 VICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYYSFKDVRTI 934
Query: 403 EYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ +I+ D + RE E ++ YC+
Sbjct: 935 QTMIQKDENLDRENKEKHLNKLQQVMAYCD 964
>gi|330752412|emb|CBL87363.1| ATP-dependent DNA helicase RecQ [uncultured Flavobacteriia
bacterium]
Length = 739
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/397 (34%), Positives = 203/397 (51%), Gaps = 60/397 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGF F+ LQK+ ++ IL + FV MPTG G + + I G
Sbjct: 17 LELELKKFFGFQKFRG-LQKQIVKSIL-NNKNTFVIMPTGG----GKSLCYQLPALISDG 70
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRF-------RDDKTSIVTGRSDLYQLELIVSGQTK 148
+ +SP+++ + +DD + V S + Q
Sbjct: 71 IAVV-----------VSPLIALMKNQVDALRGICKDDGIAHVFNSS-------LTKNQIN 112
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
K + L KLLYV PE V E L++ K+++ +DEAHC+SEWG
Sbjct: 113 NVKKDVTSGLT------KLLYVAPESLVKEENITFLKN----TKVSFFAIDEAHCISEWG 162
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP YR L ++ + G++I IIALTATA P V+ DI+ LK P ++FK S R NL
Sbjct: 163 HDFRPEYRNLRQVVKKIGDNISIIALTATATPKVQDDILKNLKMVNP-EIFKASFNRPNL 221
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
FY+V + + V+ I + K N+ GIIYC +R+ +L+ L+
Sbjct: 222 FYEV------RQKTSKVEYDIVSFI-KSNETK-SGIIYCLSRKKVEELSQFLQVNEIRAL 273
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R + Q+SF+ + VI ATI+FGMGID+ +VRFV+H +P SI +YYQE+
Sbjct: 274 PYHAGLDSKQRVKNQDSFLNEDCEVIVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 333
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
GRAGRDG + +C ++S + LE I +++E
Sbjct: 334 GRAGRDGGEGHCLAFYSYDDIEKLEKFISGKPLSEKE 370
>gi|383119448|ref|ZP_09940187.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|382973213|gb|EES87060.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
Length = 601
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T R++ + S +TEN +
Sbjct: 59 -----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GI+YC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIVDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMAS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|342905065|ref|ZP_08726857.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
gi|341951895|gb|EGT78444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21621]
Length = 619
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 209/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + +
Sbjct: 68 -----EGLTLVISPLISLM-------KDQVDQLQANGIEADFLNSSQTLEQQQQVQN--K 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 114 LISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI++ L P+K + S R N+ Y L+
Sbjct: 170 GLKASFPHA-PIMALTATADYATRQDILTHLNLENPHK-YIGSFDRPNIRYT------LE 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y +++ L + K+ GIIYC +R +A++LR K + R
Sbjct: 222 EKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGISAAAYHAGMETALR 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 279 ERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 339 AVLFYEPADYAWLQKILLEKPETSQRQIE 367
>gi|423280579|ref|ZP_17259491.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|424665170|ref|ZP_18102206.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404575034|gb|EKA79779.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404583786|gb|EKA88459.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 726
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 209/407 (51%), Gaps = 68/407 (16%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ LT +LK FGFD+FK ++ I LL +D FV MPTG + S+
Sbjct: 2 AGKIN---LTDQLKKYFGFDNFKG--NQEPIIQNLLDGNDTFVLMPTGGGKSLCYQLPSL 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I RSD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+TK LLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKTK------------------LLYVAPESLTKEENVEFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L + V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDAH-V 200
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
FK+S R NL+Y+V + +V + I K + N GIIYC +R+ +LA+
Sbjct: 201 FKSSFNRPNLYYEV------RPKTQNVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAE 252
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L+ ++ R++ Q++F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P
Sbjct: 253 ILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIP 312
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 313 KSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|453080394|gb|EMF08445.1| ATP-dependent DNA helicase recQ [Mycosphaerella populorum SO2202]
Length = 485
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 227/443 (51%), Gaps = 64/443 (14%)
Query: 26 RKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTG-AVSLVGSVV 84
RK G+ + + T L+ +FG ++F+ +Q++ + L HDIF+ TG SL
Sbjct: 7 RKLGQKVDIDFT--LRKVFGRNTFR-PVQREVVT-AALDGHDIFLQAATGFGKSLC---- 58
Query: 85 SARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVS 144
++P DF + ISP+L+ + R+ +++ I S
Sbjct: 59 -----YQLPAVVDFGITIV-------ISPLLALM-------NNQMAGLRAANIKVDTINS 99
Query: 145 GQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
++T +AI+ +L+ P I+LLYVTPE + F L+ + + +LA I VDEAHC+
Sbjct: 100 TTSQTTKQAIMADLKSGHPLIRLLYVTPEYCQLDHFRNSLKTVYQQRELARIAVDEAHCI 159
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKP-YKVFKTST 263
SEWGHDFRP+++ L +Q + +P+I TATA +V++D+I L ++ + F +T
Sbjct: 160 SEWGHDFRPSFKELSWFKQEFPD-VPMICCTATAPQAVREDVIRTLGLDQSRLQSFAMTT 218
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKC-------------LGKDNK--ANNCGIIYCR 308
R NL ++V F + +D Y + +I L + N+ N GIIY
Sbjct: 219 SRPNLHFEVRFTNEEEDRYDNFLAWIRSAHERRTNNVARSQELSQRNERPTNVSGIIYTW 278
Query: 309 TREHTTDLADALR------RKVNKHERSRVQESFMRGEI------NVITATISFGMGIDR 356
R+ T LA L+ + + +E + G + +VI AT +FGMGID+
Sbjct: 279 YRKDTEQLAARLQHDGIGAKAYHAGLTIEQKEDHLDGWVKNKDGYDVIVATTAFGMGIDK 338
Query: 357 QNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ 416
+NVRFVVHW +P S +YQESGRAGRDG S C +Y+S ++ L + ++ + +R +
Sbjct: 339 ENVRFVVHWQIPKSFEGFYQESGRAGRDGKASICMLYYSREDRERLSFTMQREMEKQRGK 398
Query: 417 LELKF-------KNYLSMLEYCE 432
E+ K+ ++++YCE
Sbjct: 399 GEMALKAQANRSKSVQALVKYCE 421
>gi|332304550|ref|YP_004432401.1| ATP-dependent DNA helicase RecQ [Glaciecola sp. 4H-3-7+YE-5]
gi|332171879|gb|AEE21133.1| ATP-dependent DNA helicase RecQ [Glaciecola sp. 4H-3-7+YE-5]
Length = 599
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 205/394 (52%), Gaps = 58/394 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D+F+ + Q++ I IL + D+ V MPTG + + A +
Sbjct: 13 LKNVFGYDAFR-DGQREVIEQIL-QGKDVLVLMPTGGGKSLCYQIPA-----------LV 59
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
L G ++ ++S +D ++V +G S Y + N+ +L
Sbjct: 60 LEG--------LTIVISPLIALMKDQVDALVASGVSAAYI-------NSNLSNEEMLNVY 104
Query: 159 R-LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
R + R KL+YV PER + F +Q L N +A VDEAHCVS WGHDFR YR+
Sbjct: 105 RGMQDGRYKLIYVAPERLMQFDF---IQRLHSLN-VALFAVDEAHCVSHWGHDFRKEYRQ 160
Query: 218 LGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
LG+++Q F G +P++ LTATA+ + + DI+ L +P+ VFK S R N+ Y+ +F
Sbjct: 161 LGQIKQQFPG--VPVVGLTATADITTRSDILQQLALEQPF-VFKGSFDRPNIRYNQLF-- 215
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
Y + I+ +D GIIYC +R+ DL+ AL R+ +
Sbjct: 216 ----KYKATDQVIQYVKQQDGS----GIIYCNSRKKVDDLSIALARQGINCAGYHAGLEG 267
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R ++Q F++ +++I AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GRAGRDG+
Sbjct: 268 PIRDKIQRDFIQDNVDIIVATVAFGMGINKSNVRFVVHFDLPRSVEAYYQETGRAGRDGM 327
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ + E + I + R +EL+
Sbjct: 328 PAEALLLFDEKDAARIRQWIGMGDNPARLDIELQ 361
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 203/402 (50%), Gaps = 46/402 (11%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL HD FV MPTG G + + + G +
Sbjct: 692 FGLRSFRPN-QLQVINATLL-GHDCFVLMPTGG----GKSLCYQLPAIMTEGVTIV---- 741
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK-TENKAILEELRLVK 162
+SP+ S + D+ + + G D+ L SG+ + + I +L K
Sbjct: 742 -------VSPLKSLIH-----DQVNKL-GSLDIPAAHL--SGEVSYADQQKIYADLSSPK 786
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + F +L L R +L V+DEAHCVS WGHDFRP Y++L L
Sbjct: 787 PVLKLLYVTPEKISSSGRFQNILTELYRMKQLGRFVIDEAHCVSAWGHDFRPDYKKLSVL 846
Query: 222 R-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
R QF +IP++ALTATA P V+ D++ L + K F S R NL Y +I
Sbjct: 847 REQFP--TIPVMALTATANPRVRIDVLKQLGLGRNTKWFLCSFNRPNLKY-IIRPKQGVA 903
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKVNKHERS 330
+ A + E I+K + GI+YC +++ L+ +R + ER
Sbjct: 904 TKAEIMELIKKKFPR-----ATGIVYCLSKKDCDQLSAEMRCAGIKAKSYHAGLGDAERE 958
Query: 331 RVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYC 390
Q+ ++ +I V+ ATI+FGMGID+ +VR+V+H MP SI YYQE+GRAGRDG + C
Sbjct: 959 ATQKDWITDKIKVVCATIAFGMGIDKPDVRYVIHHSMPKSIEGYYQEAGRAGRDGELATC 1018
Query: 391 RIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
++++ ++ D+S E ++ N M+ YCE
Sbjct: 1019 VLFYNYSDMLRYRKMMDHDSSIPFEAKQVHLHNLFRMVNYCE 1060
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 208/404 (51%), Gaps = 51/404 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LLR +D FV MPTG G + + + G +
Sbjct: 585 FGLKSFRPN-QLQVINATLLR-NDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 634
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELRLVK 162
ISP+ S + + + + +S +SG + AI +L
Sbjct: 635 -------ISPLKSLIFDQINKLASLDICSKS--------LSGDVAMADVMAIYRDLESHP 679
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F +L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 680 PMVKLLYVTPEKISSSARFQDILDTLNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGIL 739
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD---DLL 278
++ N +P IALTATA P V+ DI+S L K K F +S RSNL Y V+ +
Sbjct: 740 KKRFPN-VPTIALTATATPRVRLDILSQLNL-KNCKWFLSSFNRSNLRYKVLPKKGASTI 797
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----RRKVNKH------E 328
D A+++ N+ GIIYC +R+ ++A + R V H E
Sbjct: 798 DDMSAYIRT---------KPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTDSE 848
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ ++ +I VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG +
Sbjct: 849 REGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEVA 908
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C +Y++ L+ ++ D + + ++ N ++ YCE
Sbjct: 909 DCILYYNYSDMLRLKKMMDGDKALQYNVKKMHIDNLYRIVGYCE 952
>gi|336411370|ref|ZP_08591837.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|423251179|ref|ZP_17232194.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423254505|ref|ZP_17235435.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|335942081|gb|EGN03930.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|392652136|gb|EIY45798.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392653827|gb|EIY47478.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
Length = 601
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T R++ + S +TEN +
Sbjct: 59 -----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GI+YC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIIDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMAS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|293373225|ref|ZP_06619587.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|292631873|gb|EFF50489.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
Length = 550
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 208/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 16 LKTYFGYDSFR-PLQEEIIRHIL-NKRDALVLMPTGG----GKSICYQLPALLCKGTAVV 69
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 70 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENVQLRRAC- 110
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V+ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 111 -VEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 164
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P ++F +S R N+ V
Sbjct: 165 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RIFISSFDRPNISLTVKRGFQA 221
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 222 KEKNKAILEFIHRHGGES------GIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSTQH 275
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 276 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 335
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 336 STVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 374
>gi|419958981|ref|ZP_14475038.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
gi|388605950|gb|EIM35163.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae GS1]
Length = 609
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 217/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +++LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQEVMAGCR--TGQVRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + +QDI+ +L N PY + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRQDIVRLLGLNDPY--IQVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 376
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 377 AQTCRRLVLLNY 388
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 212/414 (51%), Gaps = 60/414 (14%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
+ +FG + + LQ AI +L R D FVS+PTG G + + I G +
Sbjct: 386 RLVFGNERLR-PLQSDAINSVLYR-RDTFVSLPTGG----GKSLCFQLPAIIDSGVTLV- 438
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILE 156
ISP+L+ + + S L QL + + S +E K I++
Sbjct: 439 ----------ISPLLALMFDQL-----------SKLLQLGVPTCALNSSVPVSEKKKIIK 477
Query: 157 ELRLVKPR---IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
EL + P KLLYVTPER T+ F +L+HL ++L +V+DEAHC+SEWGHDFR
Sbjct: 478 EL--LDPAGCPYKLLYVTPERMKTQEFIDILEHLNNTSQLKRLVIDEAHCISEWGHDFRK 535
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR+L + R+ N IPI+ALTATA P V+ DI L + + + S RSNL Y+V
Sbjct: 536 DYRKLSKFREMFPN-IPIVALTATATPKVELDIKQQLSMHNTINI-RGSFIRSNLKYEVR 593
Query: 274 FDDLLKD-SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ + + F+ + N N+ GI+YC T L + L +
Sbjct: 594 KKSTEPEFCFNDIYHFVNR-----NHKNSSGIVYCSTIAECESLCEYLTDRGLSVDFYHA 648
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+N +R QE ++ G+ ++ TI+FGMGID+ + RFV+H +PSSI +YYQ++GRAG
Sbjct: 649 SLNAAQRVDTQERWITGKFKIVCTTIAFGMGIDKPDTRFVIHHSIPSSIESYYQQTGRAG 708
Query: 383 RDGLQSYCRIYHSEHS-----KKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
RDG S C +Y++++ K S ++ ++ +E K +N ++ YC
Sbjct: 709 RDGKLSDCILYYNKNDIRKMLKISTMGIVAQSHEEYQKIMESKTENIDTVTSYC 762
>gi|262408128|ref|ZP_06084675.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|294645124|ref|ZP_06722849.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294809724|ref|ZP_06768411.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|336403758|ref|ZP_08584467.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|345508918|ref|ZP_08788536.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|229447212|gb|EEO53003.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|262353680|gb|EEZ02773.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|292639548|gb|EFF57841.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294443058|gb|EFG11838.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|335945112|gb|EGN06928.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
Length = 726
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 204/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGF+ FK ++AI + LL D FV MPTG + S++ + +
Sbjct: 7 LTDELKKCFGFNKFKG--NQEAIIYNLLDGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I RSD I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD------ILAGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVEFLRSV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRP 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A++ I K + N GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 260
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQ
Sbjct: 261 ARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 321 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|422021069|ref|ZP_16367583.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
gi|414099974|gb|EKT61607.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
Length = 608
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 217/422 (51%), Gaps = 69/422 (16%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ Q+ IR IL D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFR-PGQEAVIRAIL-DNRDCLVLMPTGG----GKSLCYQVPALVKDGITLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLE-----LIVSGQTKTENKAI 154
+SP++S ++ + D QL + S QT E + +
Sbjct: 71 -----------VSPLIS------------LMKDQVDQLQLHGVNAACLNSSQTALEQREV 107
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ + +IKLLYV PER +T+ Y L HL +N +A VDEAHC+S+WGHDFRP
Sbjct: 108 MDACS--QGKIKLLYVAPERLLTD---YFLSHLSNWN-VALFAVDEAHCISQWGHDFRPE 161
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI 273
YR +G+LRQ + +P++ALTATA+ + + DII L P + + S+F R N+ Y ++
Sbjct: 162 YRGMGQLRQHFPD-VPVMALTATADETTRADIIRRLDLQDP--LIQISSFDRPNIRYTLV 218
Query: 274 FDDLLKDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+ Y + + FI+ GK GI+YC +R + A+ L+++
Sbjct: 219 ------EKYKPLDQLWFFIKAQKGK------AGIVYCNSRNKVEETAERLKKRGLTVEAY 266
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ +R VQ++F++ I ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GR
Sbjct: 267 HAGLDNQQREWVQDAFLKDNIQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGR 326
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVIL 440
AGRDG+++ +++ L ++ + + +E N ++ + LV+L
Sbjct: 327 AGRDGVEAEAILFYDPADMAWLRRCLEEKPAGMHQDIERHKLNAIAAFAEAQTCRRLVLL 386
Query: 441 VF 442
+
Sbjct: 387 NY 388
>gi|53715360|ref|YP_101352.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60683329|ref|YP_213473.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|265767847|ref|ZP_06095379.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|336412096|ref|ZP_08592554.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|375360137|ref|YP_005112909.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|383119914|ref|ZP_09940651.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|423252209|ref|ZP_17233211.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423252529|ref|ZP_17233460.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|423261243|ref|ZP_17242144.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267768|ref|ZP_17246748.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|423272323|ref|ZP_17251291.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423276779|ref|ZP_17255711.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|423283055|ref|ZP_17261940.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|52218225|dbj|BAD50818.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60494763|emb|CAH09569.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
gi|251944080|gb|EES84599.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|263252519|gb|EEZ24047.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|301164818|emb|CBW24378.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|335939268|gb|EGN01145.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|387774395|gb|EIK36507.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392647821|gb|EIY41518.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392660605|gb|EIY54214.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|392695515|gb|EIY88727.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392695991|gb|EIY89195.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392696027|gb|EIY89229.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|404581329|gb|EKA86028.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 726
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 208/407 (51%), Gaps = 68/407 (16%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ LT +LK FGFD+FK ++ I LL +D FV MPTG + S+
Sbjct: 2 AGKIN---LTDQLKKYFGFDNFKG--NQEPIIQNLLDGNDTFVLMPTGGGKSLCYQLPSL 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I RSD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+TK LLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKTK------------------LLYVAPESLTKEENVEFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L + V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDAH-V 200
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
FK+S R NL+Y+V + +V + I K + N GIIYC +R+ +LA+
Sbjct: 201 FKSSFNRPNLYYEV------RPKTQNVDKDIIKFI--KNNPEKSGIIYCLSRKKVEELAE 252
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L+ ++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P
Sbjct: 253 ILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIP 312
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 313 KSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|423270795|ref|ZP_17249766.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423274619|ref|ZP_17253565.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392698719|gb|EIY91901.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392704877|gb|EIY98011.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
Length = 601
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEII-HNLISKKDSLVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + T R++ + S +TEN +
Sbjct: 59 -----------ISPLISLM-------KDQVETLRANGIPAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R L+ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGQLKLLYISPEKLLSEA-----DYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRNQFP--NVPMIALTATADKITREDIVRQLQLRQP-QIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GI+YC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIVDFITRHRGES------GIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|429888125|ref|ZP_19369618.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
gi|429224784|gb|EKY31102.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae PS15]
Length = 620
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S T+ E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLTREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|268592895|ref|ZP_06127116.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
gi|291311686|gb|EFE52139.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri DSM 1131]
Length = 608
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 212/413 (51%), Gaps = 51/413 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ + A+ +L D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFRP--GQDAVIGAILDNRDCLVLMPTGG----GKSLCYQVPALVKEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R + S QT E + I+E
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRLHGVNAACLNSSQTSQEQRQIMELCS 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLYV PER +T+ Y L L +N + + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGEIKLLYVAPERLLTD---YFLSQLAGWN-ITLLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LRQ N +P++ALTATA+ + + DII +L+ ++P V +S R N+ Y ++
Sbjct: 167 QLRQSLPN-VPVMALTATADETTRADIIRLLELHEPL-VHVSSFDRPNIRYTLV------ 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y + + G+ KA GI+YC +R + + L+++ ++ +R
Sbjct: 219 EKYKPLDQLWFFIKGQKGKA---GIVYCNSRSKVEETTERLQKRGLSVAAYHAGLDAAQR 275
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ++F++ + V+ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG+++
Sbjct: 276 EWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAE 335
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 336 AILFYDPADMAWLRRCLEEKPAGMQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|410639269|ref|ZP_11349819.1| ATP-dependent DNA helicase RecQ [Glaciecola chathamensis S18K6]
gi|410648965|ref|ZP_11359360.1| ATP-dependent DNA helicase RecQ [Glaciecola agarilytica NO2]
gi|410131472|dbj|GAC07759.1| ATP-dependent DNA helicase RecQ [Glaciecola agarilytica NO2]
gi|410141191|dbj|GAC08006.1| ATP-dependent DNA helicase RecQ [Glaciecola chathamensis S18K6]
Length = 604
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/394 (32%), Positives = 206/394 (52%), Gaps = 58/394 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D+F+ + Q++ I IL + D+ V MPTG + + A +
Sbjct: 18 LKNVFGYDAFR-DGQREVIEQIL-QGKDVLVLMPTGGGKSLCYQIPA-----------LV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
L+G ++ ++S +D ++V +G S Y + N+ +L
Sbjct: 65 LDG--------LTIVISPLIALMKDQVDALVASGVSAAYI-------NSNLSNEEMLNVY 109
Query: 159 R-LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
R + R KL+YV PER + F +Q L N +A VDEAHCVS WGHDFR YR+
Sbjct: 110 RGMQDGRYKLIYVAPERLMQFDF---IQRLHSLN-VALFAVDEAHCVSHWGHDFRKEYRQ 165
Query: 218 LGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
LG+++Q F G +P++ LTATA+ + + DI+ L +P+ VFK S R N+ Y+ +F
Sbjct: 166 LGQIKQQFPG--VPVVGLTATADITTRSDILQQLALEQPF-VFKGSFDRPNIRYNQLF-- 220
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
Y + I+ +D GIIYC +R+ DL+ AL ++ +
Sbjct: 221 ----KYKATDQVIQYVKQQDGS----GIIYCNSRKKVDDLSIALAKQGINCAGYHAGLEG 272
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R ++Q F++ +++I AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GRAGRDG+
Sbjct: 273 PIRDKIQRDFIQDNVDIIVATVAFGMGINKSNVRFVVHFDLPRSVEAYYQETGRAGRDGM 332
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ + E + I + R +EL+
Sbjct: 333 PAEALLLFDEKDAARIRQWIGMGDNPARLDIELQ 366
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 209/405 (51%), Gaps = 57/405 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ SF LQ+ I+ +L + D FV MPTG G + + + G +
Sbjct: 5 LQKYFGYTSF-YPLQEDIIKEVLAQ-RDAFVLMPTGG----GKSLCYQLPALLFSGVTIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + + +L+ + + S L E+ Q+ N+
Sbjct: 59 VSPLIALMKDQVDGLLA--------NGIPAIFINSSLSYSEIDAKRQSLLNNE------- 103
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
IK+LY+ PER F LQ L K++ +DE+HC+SEWGHDFRP YR+L
Sbjct: 104 -----IKILYIAPERLFMPEFLQFLQGL----KISLFAIDESHCISEWGHDFRPEYRQLE 154
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L++ +P++ALTATA P+V++DII LK + ++FK S R NL+Y + D
Sbjct: 155 ILKE-KFPKVPVMALTATATPAVQKDIILQLKLSD-CRIFKASFNRKNLYYQIKPKD--- 209
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE------R 329
+ Y + +++ ++ + GIIYC++R+ L +L+ R + H R
Sbjct: 210 NPYHQILHYLK------SRKKDSGIIYCQSRKTVESLTTSLQAEGYRVLPYHAGLPAEVR 263
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE F+ ++ +I ATI+FGMGID+ +VR+V+H+ +P SI YYQE+GRAGRDGL+S
Sbjct: 264 TENQERFIHDDVEIIVATIAFGMGIDKPDVRYVIHYDLPKSIEGYYQETGRAGRDGLKSD 323
Query: 390 CRIYHSEHSKKSLEYVI--KTDTSTKREQLELKFKNYLSMLEYCE 432
C + S K +EY I K D + K + +K + YCE
Sbjct: 324 CILLFSYADKFKIEYFIHQKIDENEKL----IAYKQLRHLTNYCE 364
>gi|298480171|ref|ZP_06998369.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273452|gb|EFI15015.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 726
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 204/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGF+ FK ++AI + LL D FV MPTG + S++ + +
Sbjct: 7 LTDELKKCFGFNKFKG--NQEAIINNLLDGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I RSD I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD------ILAGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVEFLRSV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRP 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A++ I K + N GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 260
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQ
Sbjct: 261 ARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 321 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|428170384|gb|EKX39309.1| hypothetical protein GUITHDRAFT_76434 [Guillardia theta CCMP2712]
Length = 434
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 203/414 (49%), Gaps = 63/414 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA---VSLVGSVVSARSRVRIPPGA 96
L +FGF S + QK+ I +L D F MPTGA + V A S+V +
Sbjct: 37 LHQVFGFTSLRGH-QKRVISEVL-DGKDAFAVMPTGAGKSLCYQLPAVYAESKVTL---- 90
Query: 97 DFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
++P+L+ + + ++ V + I S Q+K + + ++
Sbjct: 91 -------------VVTPLLALMLGQVKSLQSKGVLASA-------IYSSQSKRDRERVIN 130
Query: 157 ELR----------LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
+L P ++LLYVTPE T +F L L + I +DEAHCVSE
Sbjct: 131 DLLGKPSPDSEPLTFPPMMRLLYVTPELLCTSNFQQDLSILYDGGYINLIAIDEAHCVSE 190
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGH+FRP +R+LG + Q S+P +ALTATA V++D++++LK K K+F S R
Sbjct: 191 WGHEFRPCFRKLGSIHQ-RFPSVPWLALTATATEQVRRDVVNILKI-KVDKIFMQSFDRP 248
Query: 267 NLFYDVIFDDLLKDS---YAHVKEFIEKCLGKDNKANNC---------GIIYCRTREHTT 314
N+ Y V + DL+ + + + F+ + L + GIIYC T+
Sbjct: 249 NIRYQVRYKDLIGEDEQVFEDIASFVGESLNSLPRGEPVAAGLQYACSGIIYCHTKASCD 308
Query: 315 DLADAL----------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
LA L + ER +VQ+ +M G V+ ATI+FGMGID+++VRFV+H
Sbjct: 309 ALAQQLSAIGVKAKAYHAGLRPRERMQVQDEWMEGVTKVVCATIAFGMGIDKKDVRFVIH 368
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
MP S+ AYYQE+GRAGRDG +S +Y SE ++++ + Q E
Sbjct: 369 QSMPKSLEAYYQETGRAGRDGGESEALMYFSEDDANLHRFLLRKSVENQEVQPE 422
>gi|329955315|ref|ZP_08296223.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328525718|gb|EGF52742.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 604
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 209/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL +D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIL-DGNDALVLMPTGG----GKSICYQLPALLREGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D ++ L S +TEN A+
Sbjct: 59 -----------VSPLIS----LMKDQVEALCANGISAGALN---SSNDETENAALRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -TEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L RQF +PIIALTATA+ ++DII L N P ++F +S R NL V
Sbjct: 154 ILHRQFP--QVPIIALTATADKITREDIIRQLHLNHP-RIFISSFDRPNLSLTVKRGYRQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L+++ ++
Sbjct: 211 KEKSKTILDFIARHPGES------GIIYCMSRSKTESVAQMLQKQGIRTAVYHAGLSPAR 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 325 DTLLFYS-----LADLILLTKFATDSGQEGINLEKLQRMQQYAE 363
>gi|423211952|ref|ZP_17198481.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295088062|emb|CBK69585.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens XB1A]
gi|392695316|gb|EIY88539.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 726
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 204/399 (51%), Gaps = 65/399 (16%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT +LK FGF+ FK ++AI + LL D FV MPTG + S++ + +
Sbjct: 7 LTDELKKCFGFNKFKG--NQEAIINNLLDGKDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K +I RSD I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKGAIDQVRSD------ILAGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+ + K+++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVEFLRSV----KISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G + P+IALTATA P V+ DI L +VFK+S R
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QVFKSSFNRP 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL+Y+V + A++ I K + N GIIYC +R+ +LA+ L+
Sbjct: 209 NLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIIYCLSRKKVEELAEILQANGIN 260
Query: 324 -------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
++ R++ Q+ F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQ
Sbjct: 261 ARPYHAGMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
E+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 321 ETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|410619883|ref|ZP_11330774.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
gi|410160661|dbj|GAC34912.1| ATP-dependent DNA helicase RecQ [Glaciecola polaris LMG 21857]
Length = 623
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 200/392 (51%), Gaps = 54/392 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D F+ + Q++ I IL D+ V MPTG + + A +
Sbjct: 37 LKTVFGYDEFR-DGQQEVIEQIL-HGQDVLVLMPTGGGKSLCYQIPA-----------LV 83
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
L G ++ ++S +D ++V +G S Y I S + E + +
Sbjct: 84 LGG--------LTIVVSPLIALMKDQVDALVASGVSAAY----INSNLSSEEMLNVYRGM 131
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ R KL+YV PER + F L L +A VDEAHCVS WGHDFR YR+L
Sbjct: 132 Q--DGRYKLIYVAPERLMQFDFMQRLHSL----NIALFAVDEAHCVSHWGHDFRKEYRQL 185
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G+L+Q ++P+I LTATA+ + + DI+ L +P+ VFK S R N+ Y+ +F
Sbjct: 186 GQLKQ-QFPAVPVIGLTATADITTRSDILQQLALQEPF-VFKGSFDRPNIRYNQLF---- 239
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
Y + I+ +D GIIYC +R+ DL+ AL R+ +
Sbjct: 240 --KYKATDQVIQYVKQQDGS----GIIYCNSRKKVDDLSMALARQGINCAGYHAGLEGPI 293
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R ++Q F++ I++I AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GRAGRDG+ +
Sbjct: 294 RDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHFDLPRSVEAYYQETGRAGRDGMPA 353
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ E + I + R +EL+
Sbjct: 354 EALLLFDEKDAARIRQWIGMGDNPARLDIELQ 385
>gi|373955135|ref|ZP_09615095.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373891735|gb|EHQ27632.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 713
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 135/411 (32%), Positives = 216/411 (52%), Gaps = 52/411 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG+ F+ E Q+ + H+L D V MPTG G + + I G +
Sbjct: 7 LHKYFGYREFRHE-QEAIVDHVL-NQKDAMVLMPTGG----GKSICYQLPAVIFDGLTVV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ ++ + D +I + + S Q+ E + I+++L+
Sbjct: 61 -----------ISPLIA--LMKDQVDALNI-----NGINAAFLNSSQSDNEQREIIKQLK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER + L ++ K++ I +DEAHC+S WGHDFRP Y L
Sbjct: 103 --ANQIKLLYLAPERLFSSESR--LIDFLKTLKVSLIAIDEAHCISHWGHDFRPEYLMLA 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ N IP+IALTATA+ ++DI+ L N+P + F +S R N+ Y + K
Sbjct: 159 GLKIAFPN-IPVIALTATADKITRKDILDKLNLNQP-REFVSSFDRKNINYRIAPK---K 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+S+ + F+++ ++ GIIYC +R+ T DLA AL+ + + K +
Sbjct: 214 NSFTQLIAFLKE------HQDDSGIIYCLSRQSTEDLATALQAQGYSAQAYHAGLEKKIK 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE F+R EI +I ATI+FGMGI++ NVRFVVH +P +I YYQE+GRAGRDGL S
Sbjct: 268 DQNQERFLRDEIKIIVATIAFGMGINKSNVRFVVHMDLPKNIEGYYQETGRAGRDGLPSK 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL---SMLEYCEQGYFL 437
+++S + L+ + + + + ++ LK + + L+ C + Y L
Sbjct: 328 ALLFYSYADVQKLQSFARVEGNEAQSKIMLKKLDDMVRFCQLQTCRRQYLL 378
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 220/417 (52%), Gaps = 50/417 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIP 93
++ A L+ +F F+ Q +AI + L D FV MPTG SL + S
Sbjct: 696 DVKAALRDIFNLRGFRPN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPS-------- 745
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP+LS DD+ + RS + I E +
Sbjct: 746 ----VVQSGRTRGVTVVISPLLS-----LMDDQVGQL--RSLSVKAHFINGSLKAAERRQ 794
Query: 154 ILEELR--LVKPRIKLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEWGH 209
ILE L+ V+ +I+LLYVTPE V +S L L+ L R K A +V+DEAHCVS+WGH
Sbjct: 795 ILEYLQDPRVEDQIQLLYVTPE-MVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGH 853
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG+ R+ F G +P++ALTATA +VK D+I L + K F S R NL
Sbjct: 854 DFRPDYKELGDFRRHFPG--VPLMALTATATQNVKVDVIHNLGMDGCEK-FTQSFNRPNL 910
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V +D ++ + I+ GK GIIYC +R++ +A L K
Sbjct: 911 TYEVRVKGNHEDVLENIAKIIDFHYGK------TGIIYCLSRKNCEKVAKDLCTKYHVKA 964
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ +R RVQ + G+ NVI ATI+FGMGID+ +VRFV+H +P S+ YYQE
Sbjct: 965 THYHAGMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQE 1024
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTK--REQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +++ ++ +I + + + R+Q + + + ++++C+
Sbjct: 1025 TGRAGRDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQ 1081
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 220/417 (52%), Gaps = 50/417 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIP 93
++ A L+ +F F+ Q +AI + L D FV MPTG SL + S
Sbjct: 696 DVKAALRDIFNLRGFRPN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPS-------- 745
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP+LS DD+ + RS + I E +
Sbjct: 746 ----VVQSGRTRGVTVVISPLLS-----LMDDQVGQL--RSLSVKAHFINGSLKAAERRQ 794
Query: 154 ILEELR--LVKPRIKLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEWGH 209
ILE L+ V+ +I+LLYVTPE V +S L L+ L R K A +V+DEAHCVS+WGH
Sbjct: 795 ILEYLQDPRVEDQIQLLYVTPE-MVNKSQAMLDTLRQLHRRKKFARLVIDEAHCVSQWGH 853
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG+ R+ F G +P++ALTATA +VK D+I L + K F S R NL
Sbjct: 854 DFRPDYKELGDFRRHFPG--VPLMALTATATQNVKVDVIHNLGMDGCEK-FTQSFNRPNL 910
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V +D ++ + I+ GK GIIYC +R++ +A L K
Sbjct: 911 TYEVRVKGNHEDVLENIAKIIDFHYGK------TGIIYCLSRKNCEKVAKDLCTKYHVKA 964
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ +R RVQ + G+ NVI ATI+FGMGID+ +VRFV+H +P S+ YYQE
Sbjct: 965 THYHAGMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQE 1024
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTK--REQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +++ ++ +I + + + R+Q + + + ++++C+
Sbjct: 1025 TGRAGRDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQ 1081
>gi|425064148|ref|ZP_18467273.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
gi|404381741|gb|EJZ78209.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida X73]
Length = 632
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 170/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT TE + + + +L+ +KLLYV+PE+ +T SF HL+ + K++++ +DEAHC
Sbjct: 110 SSQTFTEQQQV--QNKLMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y ++ + + +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLV------EKFKPIEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R +VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +
Sbjct: 273 GVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ + + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|428201759|ref|YP_007080348.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
gi|427979191|gb|AFY76791.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
Length = 708
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/396 (33%), Positives = 203/396 (51%), Gaps = 59/396 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FG++ F+ Q+K + L + D+ V MPTG G + + + PG
Sbjct: 7 LEAALKHFFGYEHFRPG-QRKIVEEAL-QNRDLLVIMPTGG----GKSLCFQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ ++ R D Q I G T +
Sbjct: 61 LTVV-----------VSPLIA------------LMQDRVDALQDNGI--GATFLNSSLTF 95
Query: 156 EELR-----LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
E+R ++ +IKLLYV PER ++E F L + +DEAHCVSEWGHD
Sbjct: 96 PEVRSRETAILDGKIKLLYVAPERLLSERFRNFLDLAATKISITAFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L +LRQ + +P+ ALTATA V++DII L +P + S R N++Y
Sbjct: 156 FRPEYRQLIQLRQRYPH-VPMFALTATATKRVQEDIIQQLGLRQP-GIHLASFNRPNIYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V + + SY + + I G GI+YC +R + ++A L++
Sbjct: 214 EVQPKE--RRSYNQLLKLIRTQQG-------SGIVYCLSRRNVDEIAFRLQKDGISTVPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ R+ Q F+R ++ VI ATI+FGMGID+ +VRFV+H+ +P ++ +YYQESGR
Sbjct: 265 HAGITDEARTLNQTRFIRDDVKVIVATIAFGMGIDKPDVRFVIHYDLPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
AGRDG + C ++ S K +EY+I K+D +R
Sbjct: 325 AGRDGEPANCTLFLSLGDFKRIEYIIDQKSDPQEQR 360
>gi|395213964|ref|ZP_10400385.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394456500|gb|EJF10790.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 726
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 211/397 (53%), Gaps = 51/397 (12%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E L KLK +FG++ F+ ++ I + ++ + FV MPTGA + + A S
Sbjct: 6 EINLKNKLKEVFGYNQFRG--NQELIINNIINGKNTFVIMPTGAGKSLCYQLPALSL--- 60
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
PG + ISP+++ ++ + D+ + + L S K + +
Sbjct: 61 -PGTAIV-----------ISPLIA--LMKNQVDQLNAFGVNAHFLNSTLSKSEINKVKKE 106
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ E +KLLYV PE E +R + ++++ +DEAHC+SEWGHDFR
Sbjct: 107 TLAGE-------VKLLYVAPESLTKEE----TVEFLRASNISFVAIDEAHCISEWGHDFR 155
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + GN +PIIALTATA P V+ DI L+ ++ VFK+S R+NL+Y+V
Sbjct: 156 PEYRRIRGIIDQIGN-LPIIALTATATPKVQLDIQRNLQMDEA-SVFKSSFNRTNLYYEV 213
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
++ V ++++K GK G+IYC +R+ ++A+ LR
Sbjct: 214 ---RPKHNTKKQVIQYVKKHKGK------SGVIYCLSRKKVEEIAELLRVNDIKALPYHA 264
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ + R Q++F+ E +VI ATI+FGMGID+ +VRFV+H+ P SI YYQE+GRAG
Sbjct: 265 GLDSNIRMANQDAFLNEEADVIVATIAFGMGIDKPDVRFVIHYDTPKSIEGYYQETGRAG 324
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLEL 419
RDGL+ C +++S LE K T+R+ +L
Sbjct: 325 RDGLEGNCIMFYSYDDIIKLEKFNKDKPVTERDNSKL 361
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 206/406 (50%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVRIPPGADFI 99
FG SF+ Q +AI LL D F+ MPTG + + VSA V I P I
Sbjct: 434 FGLHSFRTN-QLEAINAALL-GEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLI 491
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + L+ D ++ +TG D+ T + +L
Sbjct: 492 IDQVQK--------------LKTLDIASTYLTG--DI----------TDADASKTYMQLS 525
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 526 KKDPIIKLLYVTPEKVCASNRLLSALENLYNRKLLARFVIDEAHCVSQWGHDFRKDYKRL 585
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ +S+P++ALTATA P V++DI + L+ KP +VF S R NL YDV+
Sbjct: 586 NMLRK-KFHSVPMMALTATANPRVQKDIQNQLEMLKP-QVFTMSFNRHNLKYDVLPKKPK 643
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K + + E+I+K D+ GIIYC +R H D A+ +K +
Sbjct: 644 KVAMDCL-EWIKKYHPHDS-----GIIYCLSR-HECDTTAAILQKEGLAALAYHAGLTDS 696
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ+ ++ E VI ATI+FGMGID+ +VR+V+H +P SI YYQESGRAGRDG
Sbjct: 697 NRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGE 756
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 757 MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 802
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 202/393 (51%), Gaps = 49/393 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q L LK FG+ +F+ Q+ I L+ D+ + MPTG G + + +
Sbjct: 27 QSLGDALKQFFGYTTFRPGQQQ--IVEEALQNRDLLIIMPTGG----GKSLCFQLPALLK 80
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ +D ++V + T + +
Sbjct: 81 PGLTVV-----------VSPLIALM----QDQVDALVDN-----GIGATFLNSTLSWDAV 120
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
E+ ++ +IKLLYV PER + E F L+ + ++ VDEAHCVS WGHDFRP
Sbjct: 121 RSREMAILNGKIKLLYVAPERLLAERFAPFLEQVRSQVGISAFAVDEAHCVSAWGHDFRP 180
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR++ +LRQ + IPI+ALTATA V+QDI+ L +P + S R NL+Y++
Sbjct: 181 EYRQIKQLRQRYPD-IPILALTATATKRVQQDIVQQLTLRQP-SIHIASFNRPNLYYEI- 237
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ SY + + ++ G GIIYC +R ++A L++
Sbjct: 238 -QPKQRQSYNQLFKKVQSHKGS-------GIIYCLSRRSVDEVAFRLQKDGISALPYHAG 289
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +RS Q F+R ++ VI ATI+FGMGI++ +VRFV+H+ +P ++ YYQESGRAGR
Sbjct: 290 MSDIDRSSNQNRFIRDDVQVIVATIAFGMGINKLDVRFVIHYDLPRNLEGYYQESGRAGR 349
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
DG +YC I++ L+Y+I K D +R
Sbjct: 350 DGEPAYCTIFYRPGDVPRLDYLIDQKPDPREQR 382
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 203/405 (50%), Gaps = 52/405 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ Q++AI LL D FV MPTG G + + I G +
Sbjct: 642 FGLHHFRTN-QQEAINAALL-GEDCFVLMPTGG----GKSLCYQLPACILVGVTIV---- 691
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKTENKAILEELR 159
ISP+ ++ IV L +++ + +T E I +L
Sbjct: 692 -------ISPL-----------RSLIVDQVQKLTSMDIPATYLTGDKTDAEASRIYMQLS 733
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L + LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 734 KKDPIIKLLYVTPEKVCSSGRLMSTLENLYQRQLLARFVIDEAHCVSQWGHDFRQDYKRL 793
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ S+P++ALTATA P V++DI++ L+ KP +VF S R NL YDV+
Sbjct: 794 NMLRKKFA-SVPMMALTATANPRVQKDILNQLEMLKP-QVFSMSFNRHNLKYDVL-PKRP 850
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K ++I K D+ GIIYC +R +A L++ +
Sbjct: 851 KSVALDCLQWIRKYHPYDS-----GIIYCLSRYECDSMASNLQKAGLSALAYHAGLPDET 905
Query: 329 RSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R VQ+ ++ + +I ATI+FGMGID+ +VRFV+H +P SI YYQESGRAGRDG +
Sbjct: 906 RDIVQQKWINQDGCQIICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQESGRAGRDGER 965
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 966 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 1010
>gi|109896583|ref|YP_659838.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas atlantica T6c]
gi|109698864|gb|ABG38784.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas atlantica T6c]
Length = 602
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 200/392 (51%), Gaps = 54/392 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D F+ + Q+ I IL + HD+ V MPTG + + A +
Sbjct: 15 LKTVFGYDEFR-DGQRDVIEKIL-QGHDVLVLMPTGGGKSLCYQIPA-----------LV 61
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
L G ++ ++S +D ++V +G S Y I S + E + +
Sbjct: 62 LEG--------LTIVVSPLIALMKDQVDALVASGVSAAY----INSNLSSEEIHNVYRGM 109
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ KL+YV PER + F L L +LA VDEAHCVS WGHDFR YRRL
Sbjct: 110 Q--DGHYKLIYVAPERLMQFDFIQRLHSL----ELALFAVDEAHCVSHWGHDFRKEYRRL 163
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G+L+Q ++P++ LTATA+ + + DI+ L P+ +FK S R N+ Y+ +F
Sbjct: 164 GQLKQ-QFPTVPVVGLTATADITTRSDILQQLALQDPF-IFKGSFDRPNIRYNQLF---- 217
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
Y + I+ + GIIYC +R+ DL+ AL R+ +
Sbjct: 218 --KYKATDQVIQYV----KQQEGSGIIYCNSRKKVDDLSIALARQGINCAGYHAGLEGPI 271
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R ++Q F++ I++I AT++FGMGI++ NVRFVVH+ +P S+ AYYQE+GRAGRDG+ +
Sbjct: 272 RDKIQRDFIQDNIDIIVATVAFGMGINKSNVRFVVHFDLPRSVEAYYQETGRAGRDGMPA 331
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ E + I + +R +EL+
Sbjct: 332 EALLLFDEKDAARIRQWIGMGDNPERLDIELQ 363
>gi|119943986|ref|YP_941666.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
gi|119862590|gb|ABM02067.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
Length = 602
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 212/401 (52%), Gaps = 55/401 (13%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG++ F+ E Q+ I L D V MPTG G + + + PG F+
Sbjct: 16 VFGYNEFR-EGQELIINQ-LCEGRDALVVMPTGG----GKSLCFQIPALVKPGICFV--- 66
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
ISP++S K + R+ + S + + +L ++
Sbjct: 67 --------ISPLISLM-------KDQVDALRACGVAAAYLNSSLSYQQQNQVLNDMH--S 109
Query: 163 PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
++KL+Y+ PER + F L +L + +DEAHC+S+WGHDFRP Y LG+L+
Sbjct: 110 GQLKLVYMAPERLLRPDFLSRLDNL----PINLFAIDEAHCISQWGHDFRPEYALLGQLK 165
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLLKDS 281
Q + IP++ALTATA+ + +QDI++ L+FN P + +F R N+ Y LL +
Sbjct: 166 QRFPD-IPLVALTATADYATQQDILARLQFNDP--LIAIHSFDRPNIEY------LLIEK 216
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSR 331
Y + + D N GIIYC +R T +LA+ LR K + ER
Sbjct: 217 YRPLNQLANYL---DEHKNESGIIYCTSRRRTEELAEKLRVKGLSVRCYHAGMMIEERQS 273
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
VQ+ F++ +++++ AT++FGMGID+ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 274 VQDLFIKDKVDIVVATVAFGMGIDKPNVRFVVHYEIPKNIESYYQETGRAGRDGLPAQAM 333
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++ + +++ +T+ +++++EL N +M+ + E
Sbjct: 334 LFYDPADAGRVRSMLEKNTNEQQQRIELHKLN--TMVAFAE 372
>gi|302689945|ref|XP_003034652.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
gi|300108347|gb|EFI99749.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
Length = 702
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 209/408 (51%), Gaps = 44/408 (10%)
Query: 6 SKDASSAVGKSSSLTGNQQDRKGGKV-SEQELTAKLKALFGFDSFKCELQKKAIRHILLR 64
S D + G S + + K + S ++ K +FG+ SF+ + QK+A+ ++
Sbjct: 33 SNDPQNEAGPSKPRSACKPRSKNNSILSYVKVEKSAKQIFGYPSFRGK-QKEAV-EAAVQ 90
Query: 65 THDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRD 124
D+FV PTG + V A V G + +SP+L+
Sbjct: 91 GQDVFVLAPTGMGKSLCFQVPA---VAAAHGVTLV-----------VSPLLALM------ 130
Query: 125 DKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLL 184
K + + + + S K+ A++ +LR +P+ +LLYV+PER T F +L
Sbjct: 131 -KNQVEALDAKGVHVASLTSETLKSVKNAVINDLRSARPKTRLLYVSPERFCTADFQAIL 189
Query: 185 QHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQ 244
+ L L +VVDEAHC+S+WGHDFR YR+LG R +PI+ALTATA P+V+
Sbjct: 190 EGLHDNGMLNRLVVDEAHCISQWGHDFRAEYRKLGMFRD-NFPEVPIMALTATATPAVQS 248
Query: 245 DIISVLKFNKPYKVFKT--STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNC 302
DI+ L ++FK R+NL+Y+V + + + I + + + ++
Sbjct: 249 DILRSLNMTDD-RLFKALHPFNRANLYYEVRYSCSATGQMKDIYDLISRLHERRGRPSS- 306
Query: 303 GIIYCRTREHTTDLADALRRK---------------VNKHERSRVQESFMRGEINVITAT 347
GI+YCR R+ +LA+ LR++ ++K + G+++V+ AT
Sbjct: 307 GIVYCRRRDTCDELAEFLRKRGMNARPYHRGIKGPTLDKTLAEWTAGGQVEGDLHVVVAT 366
Query: 348 ISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHS 395
I+FG+GID+ +VR+++H+ +P+S YYQE+GRAGRDG S C +Y+S
Sbjct: 367 IAFGLGIDKPDVRYIIHYDLPTSFEGYYQETGRAGRDGAPSRCILYYS 414
>gi|110597180|ref|ZP_01385469.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
gi|110341371|gb|EAT59836.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
Length = 597
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 193/379 (50%), Gaps = 51/379 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
++ +FGF F+ Q+K +R IL D+F MPTG G + + + PG +
Sbjct: 1 MRKVFGFREFRPN-QEKIVRAIL-EKRDVFAVMPTGG----GKSLCYQLPAVLLPGTCMV 54
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ K + R++ + + S Q E ++++ EL
Sbjct: 55 -----------ISPLIALM-------KDQVDGARANGIRAAFLNSSQLPEERESVMREL- 95
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ + LLYV PER + F LL + ++ V+DEAHCVSEWGHDFRP Y L
Sbjct: 96 -LSNSLDLLYVAPERFTFDHFRELLGRV----NISMAVIDEAHCVSEWGHDFRPDYLSLS 150
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L + +P+ A TATA V+QDI+ + P + + S R NLFYDV F +
Sbjct: 151 ALVSLFPD-LPVSAFTATATHRVQQDILDRIALRNPL-IVRASFDRPNLFYDVRFKE--- 205
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
A + ++ GK GIIY +R+ D A L+ + ++ ER
Sbjct: 206 KPDAQIVAILKANKGK------AGIIYRTSRKSVNDTAAMLQARGFRALPYHAGLSDDER 259
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
R QE+F+R E+ VI ATI+FGMGID+ N+RFV+H +P SI YYQE+GRAGRDG ++
Sbjct: 260 KRNQEAFIRDEVEVIVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAH 319
Query: 390 CRIYHSEHSKKSLEYVIKT 408
C + ++ + + I +
Sbjct: 320 CTLLFAQGDIPKVRFFIDS 338
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 212/418 (50%), Gaps = 50/418 (11%)
Query: 10 SSAVGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIF 69
SSAVG ++ + + Q L LK FG+D+F+ ++ I L D+
Sbjct: 32 SSAVG---TIIASSAQNQSIMYQLQSLEEALKHFFGYDAFRP--GQRQIVEEALAQRDLL 86
Query: 70 VSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSI 129
V MPTG G + + + PG + +SP+++ +D ++
Sbjct: 87 VIMPTGG----GKSLCFQLPALLKPGLTVV-----------VSPLIAL----MQDQVDAL 127
Query: 130 VTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVR 189
V + T + + EL ++ +IKLLYV PER + E F L+ +
Sbjct: 128 VDN-----GIGATFLNSTLSWDDVRSRELAILNGKIKLLYVAPERLLGEKFLPFLEKVRA 182
Query: 190 YNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISV 249
++ +DEAHCVSEWGHDFRP YR++ +LRQ + IPI+ALTATA V+QDI+
Sbjct: 183 QIGISAFAIDEAHCVSEWGHDFRPEYRQMKQLRQRYPD-IPILALTATATKRVQQDILEQ 241
Query: 250 LKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRT 309
L +P + S R NL+Y+V + + SY + L K GI+YC +
Sbjct: 242 LTLRQP-GIHIASFNRPNLYYEVQPKE--RHSY-------NQLLKKIKSHKGSGIVYCLS 291
Query: 310 REHTTDLA--------DALRRKVNKHERSRV--QESFMRGEINVITATISFGMGIDRQNV 359
R ++A DAL + +R Q F+R ++ V+ ATI+FGMGI++ +V
Sbjct: 292 RRAVDEVAFRLQKDGIDALPYHAGMSDEARATNQTRFIRDDVQVMVATIAFGMGINKPDV 351
Query: 360 RFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
RFV+H+ +P ++ YYQESGRAGRDG ++C ++ + ++++Y+I+ K +++
Sbjct: 352 RFVIHYDLPHNLERYYQESGRAGRDGEPAHCTLFFGAGNIRTIDYLIEQKPDPKEQRV 409
>gi|197287158|ref|YP_002153030.1| ATP-dependent DNA helicase RecQ [Proteus mirabilis HI4320]
gi|227357149|ref|ZP_03841518.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|425070259|ref|ZP_18473373.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
gi|425074080|ref|ZP_18477185.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|194684645|emb|CAR46565.1| ATP-dependent DNA helicase [Proteus mirabilis HI4320]
gi|227162681|gb|EEI47648.1| ATP-dependent DNA helicase [Proteus mirabilis ATCC 29906]
gi|404594320|gb|EKA94907.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW4]
gi|404595525|gb|EKA96065.1| ATP-dependent DNA helicase recQ [Proteus mirabilis WGLW6]
Length = 609
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 51/413 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I ++ D V MPTG + + A +
Sbjct: 17 LRETFGYQQFRPGQQE--IIDTIITGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G ++ ++S +D + L+ ++ T++ ++ + ++R
Sbjct: 64 LDG--------LTVVVSPLISLMKDQVDQLC-----LHGIDAAFLNSTQSRDEQLQVQMR 110
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLY+ PER + ESF L HLV++ A + VDEAHC+S+WGHDFRP YR +G
Sbjct: 111 CQRGEIKLLYIAPERLMMESF---LHHLVQWQP-ALLAVDEAHCISQWGHDFRPEYRGIG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LRQ+ + +PIIALTATA+ + + DII+ L P V +S R N+ Y ++
Sbjct: 167 LLRQYLPD-VPIIALTATADNTTRHDIINQLALRTPL-VHISSFDRPNIRYTLV------ 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y + + G+ K+ GIIYC +R + A+ L ++ ++ R
Sbjct: 219 EKYKPLDQLWLFIRGQKGKS---GIIYCNSRSKVEETAERLGKRGLSIAAYHAGMDIATR 275
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
++VQ++F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 276 AKVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAQ 335
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L + ++++ +E N + + LV+L +
Sbjct: 336 AVLFYDPADMAWLRRCLDEKPESEQKAIESHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|116180606|ref|XP_001220152.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
gi|88185228|gb|EAQ92696.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
Length = 1451
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 167/322 (51%), Gaps = 35/322 (10%)
Query: 136 LYQLELIVSGQTKTENKA----ILEELRLVKPR--IKLLYVTPERAV-TESFHYLLQHLV 188
L +L ++ + T T N A IL P ++LLYVTPE + +F +Q L
Sbjct: 635 LTRLNILAAMSTGTINNALRNHILGAFHQPNPEHHVQLLYVTPEMITNSPAFKKGIQTLY 694
Query: 189 RYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDII 247
KLA IV+DEAHCVS WGHDFRP Y+ LG R F G +P++ALTATA +V D+
Sbjct: 695 DKGKLARIVIDEAHCVSHWGHDFRPDYKALGTFRAAFPG--VPVMALTATATKNVMADVK 752
Query: 248 SVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGK---DNKANNCGI 304
L ++F S R NL+Y+VI FI +GK CGI
Sbjct: 753 HNLSMEN-CEIFTQSFNRPNLYYEVI---------PKAARFI-GGMGKLITTKYPGQCGI 801
Query: 305 IYCRTREHTTDLADALRRKVN-----------KHERSRVQESFMRGEINVITATISFGMG 353
+YC +R+ A AL K N + VQE + +GE++V+ ATI+FGMG
Sbjct: 802 VYCLSRKSAEGTATALVTKHNIKARYYHAQMDPEAKVEVQEKWQKGEVHVVVATIAFGMG 861
Query: 354 IDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTK 413
ID+ +VRFV+H MP S+ YYQE+GRAGRDG S C +Y + +L ++ D +
Sbjct: 862 IDKPDVRFVIHQNMPKSLEGYYQETGRAGRDGNPSDCYLYFAYSDIPTLRRMVNEDRDKQ 921
Query: 414 REQLELKFKNYLSMLEYCEQGY 435
+ E + M+ YCE Y
Sbjct: 922 PAEKERQHAMINRMVSYCESSY 943
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/391 (32%), Positives = 194/391 (49%), Gaps = 49/391 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+ L LK FG+D F+ ++ I L D+ V MPTG
Sbjct: 9 ETLEHALKHYFGYDEFRS--GQREIITTALANRDLLVVMPTGG----------------- 49
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G +NG ++ ++S +D + L ++ + K + A
Sbjct: 50 -GKSLCFQLPALLKNG-VTIVVSPLIALMQDQVQLLANNGIPATFLNSSITTEEKRDRVA 107
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ IKLLYV PER E L L + +A +DEAHCVSEWGHDFRP
Sbjct: 108 AIH-----NGEIKLLYVAPERLNQEFISNFLVDLHQEVGIAGFAIDEAHCVSEWGHDFRP 162
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR+L +LR + +P + LTATA V+ DII+ L+ +P+ V S R NL+Y+V
Sbjct: 163 DYRKLAQLRHYF-PKVPWLGLTATATDRVRSDIINQLELREPH-VHIASFNRPNLYYEV- 219
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ + A KE L + ++ GIIYC +R+ +L L++
Sbjct: 220 ----RRKTTAPYKEL----LAQVKQSEGSGIIYCLSRKKVDELTTKLKQDGIKVVPYHAG 271
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q SF+R ++ VI AT++FGMGI++ +VRFV+H+ +P +I YYQESGRAGR
Sbjct: 272 LDGETRTKNQNSFIRDDVKVIVATVAFGMGINKPDVRFVIHYDLPRNIEGYYQESGRAGR 331
Query: 384 DGLQSYCRIYHSEHSKKSLEYVI--KTDTST 412
DG ++C +Y K++EY+I K D T
Sbjct: 332 DGEPAHCTLYFGMGDIKTIEYLIAQKVDPET 362
>gi|417840674|ref|ZP_12486783.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
gi|341950862|gb|EGT77444.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19501]
Length = 615
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 208/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + +
Sbjct: 68 -----EGLTLVISPLISLM-------KDQVDQLQANGIEADFLNSSQTLEQQQQVQN--K 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 114 LISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI+S L P+K + S R N+ Y L+
Sbjct: 170 GLKASFPDA-PIMALTATADYATRQDILSHLNLENPHK-YIGSFDRPNIRYT------LE 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y +++ L + K+ GIIYC +R +A++L K + R
Sbjct: 222 EKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLCNKGVSAAAYHAGMETARR 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 279 DRVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 339 AVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|238756279|ref|ZP_04617594.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
gi|238705485|gb|EEP97887.1| ATP-dependent DNA helicase recQ [Yersinia ruckeri ATCC 29473]
Length = 609
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 205/377 (54%), Gaps = 72/377 (19%)
Query: 31 VSEQELTAK-LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
+++++L A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 7 INKEQLAAQVLRETFGYQQFRPGQQE--IINATLAGQDCLVVMPTGG----GKSLCYQIP 60
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKT---SIVTGRSDLYQLELIVSGQ 146
+ G + +SP++S ++ + D+ + G + S Q
Sbjct: 61 ALVMDGLTLV-----------VSPLIS--LMKDQVDQLLAYGVAAG--------CLNSSQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + A+++ R +IKLLY+ PER V E+F L+H + A + VDEAHC+S+
Sbjct: 100 TREQQLAVMDGCR--NGQIKLLYIAPERLVMENFLEQLEHW----RPALLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF- 264
WGHDFRP YR LG+L R+F ++P+IALTATA+ + + DI+ +L N+P + + S+F
Sbjct: 154 WGHDFRPEYRALGQLKRRFP--ALPVIALTATADEATRGDIVRLLDLNQP--LIQVSSFD 209
Query: 265 RSNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADA 319
R N+ Y ++ D L + F++ GK GIIYC +R D
Sbjct: 210 RPNIRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTAR 255
Query: 320 LRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPS 369
L+ + ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P
Sbjct: 256 LQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPR 315
Query: 370 SIPAYYQESGRAGRDGL 386
+I +YYQE+GRAGRDGL
Sbjct: 316 TIESYYQETGRAGRDGL 332
>gi|392969325|ref|ZP_10334740.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387841519|emb|CCH56798.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 736
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 204/390 (52%), Gaps = 51/390 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK +FG+ F+ + ++AI H +L + FV MPTGA G + + + G
Sbjct: 12 LKERLKEIFGYSQFRGD--QEAIIHSILAGRNTFVIMPTGA----GKSLCYQLPAIVSDG 65
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ K + + + + S +K E +
Sbjct: 66 TAIV-----------ISPLIALM-------KNQVDQLNAFGINAQFLNSTLSKAEMNKVK 107
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ + +KLLY+ PE E L L + N ++++ +DEAHC+SEWGHDFRP Y
Sbjct: 108 KDT--LSGSLKLLYIAPESLTKEEN---LDFLKKAN-ISFVAIDEAHCISEWGHDFRPEY 161
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ + GN +P+IALTATA P V+QDI L+ ++K+S R NL+Y++
Sbjct: 162 RKIRGIVDNIGN-LPVIALTATATPKVQQDIQKNLQMEDA-NLYKSSFNRKNLYYEI--- 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
K K+ I+ K NK + GI+YC +R+ D+A+ L ++
Sbjct: 217 ---KPKIDAKKQLIKYV--KQNKGKS-GIVYCLSRKTVEDIAELLNVNDIKALPYHAGLD 270
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R Q++F+ E++VI ATI+FGMGID+ +VRFV+H+ P S+ YYQE+GRAGRDG
Sbjct: 271 PLTRMNNQDAFLNEEVDVIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDG 330
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
L+ C +++S LE K T+R+
Sbjct: 331 LEGNCVMFYSYDDIVKLEKFNKDKPVTERD 360
>gi|393785533|ref|ZP_10373683.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392662288|gb|EIY55852.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 726
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 207/400 (51%), Gaps = 54/400 (13%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSAR 87
GK++ LT +LK FGFD FK ++AI LL D FV MPTG G + +
Sbjct: 2 AGKIN---LTDQLKQYFGFDKFKG--NQEAIIQNLLDGRDTFVLMPTGG----GKSLCYQ 52
Query: 88 SRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ G + ISP+++ + V + + + I
Sbjct: 53 LPSLLMEGTGIV-----------ISPLIALM--------KNQVDAMRNFSEEDGIAHFIN 93
Query: 148 KTENKAILEELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
+ NK +++++ ++ + KLLYV PE E L+ + K+++ VDEAHC+S
Sbjct: 94 SSLNKGAIDQVKADILAGKTKLLYVAPESLTKEENVEFLRSV----KISFYAVDEAHCIS 149
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
EWGHDFRP YRR+ + G + P+IALTATA P V+ DI L ++FK+S R
Sbjct: 150 EWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QIFKSSFNR 207
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL+Y+V + A++ I K + N GIIYC +R+ +LA+ L+
Sbjct: 208 PNLYYEV------RPKTANIDRDIIKFI--RNNPEKSGIIYCLSRKKVEELAEILQANGI 259
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R++ Q+ F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+ YY
Sbjct: 260 NARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYY 319
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
QE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 320 QETGRAGRDGGEGRCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|261494329|ref|ZP_05990823.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309978|gb|EEY11187.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. OVINE]
Length = 599
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 206/389 (52%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ + Q++ I +L D V M TG + V A
Sbjct: 9 LNNVFGYQKFR-DGQEEVINAVL-ENRDCLVIMTTGGGKSLCYQVPA-----------LC 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G I+ ++S +D ++T +E T+T + L E +
Sbjct: 56 LDG--------ITLVISPLISLMKDQVDQLITNG-----IEAAYLNSTQTLEEQQLVEQK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T+ F H + K+++I VDEAHCVS+WGHDFRP Y LG
Sbjct: 103 ALSGQLKLLYLSPEKVMTQGFF----HFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR T +P++ALTATA+P+ + DI+ L+ N P+ ++ S R N+ Y V + K
Sbjct: 159 GLRN-TFPDVPLMALTATADPTTRSDILHHLRLNSPH-IYLGSFDRPNIRYTV--QEKFK 214
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-RKVNK---------HER 329
+K FI K GK GI+YC +R+ ++ + L RK++ +R
Sbjct: 215 PLEQLIK-FISKQQGKS------GIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ +F R +I ++ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L S
Sbjct: 268 ERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ + +++ ++
Sbjct: 328 AVLFYDPSDYAWLQKILLEEPESEQRNIK 356
>gi|383113297|ref|ZP_09934070.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|382948819|gb|EFS32303.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
Length = 608
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 207/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ I H+L D V MPTG G + + + G +
Sbjct: 11 LKTYFGYDSFR-PLQEEIIHHVL-NKQDTLVLMPTGG----GKSICYQLPALLCEGTAVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 65 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 106 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 159
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPIIALTATA+ ++DI+ L N P +VF +S R N+ V
Sbjct: 160 VLHQQFP--QIPIIALTATADKITREDIVRQLHLNHP-RVFISSFDRPNISLTVKRGFQA 216
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 217 KEKNKAILEFIHRHGGES------GIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 270
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 271 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 330
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 331 STVLFYSLG-----DLILLTKFASESNQQSINLEKLQRMQQYAE 369
>gi|449138839|ref|ZP_21774090.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula europaea
6C]
gi|448882613|gb|EMB13176.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula europaea
6C]
Length = 1002
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 163/283 (57%), Gaps = 29/283 (10%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
Q L+ S Q+ + ++++EE+ K + L+YV PER F +V ++ +
Sbjct: 113 QARLLNSTQSPGQQESVMEEMAAGK--LDLIYVAPERLRNGRFL----DVVPKANVSLLA 166
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHCVSEWGHDFRP Y RLG R + I LTATA P+V+ DI +L +P +
Sbjct: 167 VDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIGLTATATPTVRDDICELLNLKQP-R 225
Query: 258 VFKTSTFRSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
VF T R+NL + V +D+ K + +++++ K G GIIY TR+ +
Sbjct: 226 VFVTGFARTNLRFSVTPCNNDVAKQNA--LRDYLAKQPG-------AGIIYGATRKRCEE 276
Query: 316 LADALRRKVNKH-----------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+A+ L K + ER RVQESFM+G+++ I AT +FGMGID+ ++RFVVH
Sbjct: 277 IAEWLPEKTGRKVGVYHAGMHPDERRRVQESFMKGDLSAIVATNAFGMGIDKSDIRFVVH 336
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK 407
+ MP S+ AYYQE+GRAGRDG S C + + ++ E+ I+
Sbjct: 337 YNMPGSLEAYYQEAGRAGRDGGMSQCLLLFAYSDRQIQEFFIE 379
>gi|294658176|ref|XP_460513.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
gi|202952930|emb|CAG88826.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
Length = 1367
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 215/410 (52%), Gaps = 42/410 (10%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ +KL ++F +F+ Q AI L D+FV MPTG + + A
Sbjct: 613 KEVYSKLNSVFKLSNFRPN-QLHAISSTL-NGKDVFVLMPTGGGKSLCYQLPA------- 663
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R +SP++S D+ + ++ + ++ S + +E K+
Sbjct: 664 ----LVKSGKTRGTTIVVSPLIS-----LMQDQVQHLLNKN--IKAGMVSSKGSASERKS 712
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
L+ R ++ L+Y++PE ++ ++ L N+LA +VVDEAHCVS WGHDFR
Sbjct: 713 TLDSFR--NGQLDLVYLSPEMINASQHIQRIITKLYDMNELARVVVDEAHCVSSWGHDFR 770
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ + + +P++ALTATA V+ DII LK + P + K S R NLFY++
Sbjct: 771 PDYKGMNYFKHNYP-KVPVMALTATANEKVRMDIIHHLKMDNPI-LLKQSFNRLNLFYEI 828
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTR---EHTTDL-------ADALRR 322
+ ++ +K +I L K + N GIIYC ++ EHT++ A
Sbjct: 829 KWK--TSNTLEWIKNYI---LTK--QVNKTGIIYCHSKQSCEHTSEKLNEWGVNASYYHA 881
Query: 323 KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +R +Q + + E+ +I ATI+FGMGID+ +VR+V+H +P ++ YYQE+GRAG
Sbjct: 882 GLSPTDRFEIQNKWQQNELQIICATIAFGMGIDKPDVRYVIHLFIPRTLEGYYQETGRAG 941
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG S C +++S +SL+ +I+ D RE E +++YCE
Sbjct: 942 RDGAYSECIMFYSYKDARSLQNMIQRDEELDREGKENHLAKLRQVVQYCE 991
>gi|378775278|ref|YP_005177521.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
gi|356597826|gb|AET16552.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida 36950]
Length = 632
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 170/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT TE + + + +L+ +KLLYV+PE+ +T SF HL+ + K++++ +DEAHC
Sbjct: 110 SSQTFTEQQQV--QNKLMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y ++ + + +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLV------EKFKPMEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R +VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +
Sbjct: 273 GVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ + + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|166240658|ref|XP_645178.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|165988694|gb|EAL71344.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 973
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 201/387 (51%), Gaps = 60/387 (15%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSARSRVRIPPGA 96
+ +FG F+ LQ +AI IL D FVS+PTG SL + S+V R G
Sbjct: 471 RDIFGNKEFR-NLQIEAINSIL-HDRDTFVSLPTGGGKSLCFQIPSIVDHR-------GV 521
Query: 97 DFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
F+ ISP+L+ + K+ + S I S ++ EN+ +L+
Sbjct: 522 TFV-----------ISPLLALMQDQVHKLKSLGIPAES-------INSSGSQRENRDVLD 563
Query: 157 ELRLVKP-RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+L + ++KL+Y+TPER F +LL L +L +VVDEAHC+SEWGH FRP Y
Sbjct: 564 QLLNGETCKLKLIYITPERLAQSEFLHLLDQLYDQGRLRRLVVDEAHCISEWGHSFRPKY 623
Query: 216 RRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
R + R +F S+PI A TA+A P+V+ DI + LK P + +S R NL Y V
Sbjct: 624 RLISTFRDRFP--SVPISAFTASATPNVEIDIKNSLKMVNPITI-NSSFLRPNLLYQVRQ 680
Query: 273 ---IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR------- 322
+ LLKD Y + N+ GIIYC T +AD L
Sbjct: 681 KQSDEESLLKDIYNFISF---------KYPNSTGIIYCATVRECEIVADYLSERGLSSNF 731
Query: 323 ---KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
K++ +RS++Q+ + GE ++ TI+FGMGID+ + RFV+H MP S+ +YYQ++G
Sbjct: 732 YHAKLSNTQRSKLQKDWTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMPQSMESYYQQTG 791
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVI 406
RAGRDG S C +++++ +++I
Sbjct: 792 RAGRDGKHSDCLLFYNKSDLMRFKHII 818
>gi|15603292|ref|NP_246366.1| RecQ protein [Pasteurella multocida subsp. multocida str. Pm70]
gi|18202817|sp|Q9CL21.1|RECQ_PASMU RecName: Full=ATP-dependent DNA helicase RecQ
gi|12721804|gb|AAK03511.1| RecQ [Pasteurella multocida subsp. multocida str. Pm70]
Length = 632
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 170/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT TE + + + +L+ +KLLYV+PE+ +T SF HL+ + K++++ +DEAHC
Sbjct: 110 SSQTFTEQQQV--QNKLMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y ++ + + +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLV------EKFKPMEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R +VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +
Sbjct: 273 GVSAQAYHAGLETSQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ + + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|146413823|ref|XP_001482882.1| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC
6260]
Length = 1176
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 210/414 (50%), Gaps = 50/414 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + L++ F SF+ Q +A+ L+ D FV MPTG + + A
Sbjct: 506 KEVYSILQSTFNLLSFRPN-QLEAVT-ATLQGKDTFVLMPTGGGKSLCYQLPA------- 556
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP++S D+ + ++ + ++ S T +E K
Sbjct: 557 ----LVTSGRTRGTTIVISPLIS-----LMQDQVQHLLDKN--IRAGMVSSKGTASERKQ 605
Query: 154 ILEELRLVKPRIKLLYVTPERA-VTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+E R ++ L+Y++PE + ++ L +LA IVVDEAHCVS WGHDFR
Sbjct: 606 TVELFR--SGQLDLVYLSPEMVNASLQIQNIISRLNSNQQLARIVVDEAHCVSSWGHDFR 663
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+ + +Q N IP++ALTATA V+ DII L +P + K S R+NLFY++
Sbjct: 664 PDYKGMNMFKQQYPN-IPLMALTATANEKVRMDIIHHLNMTEPV-LLKQSFNRTNLFYEI 721
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVN------- 325
K + E+I + A+N GIIYC H+ L + K+N
Sbjct: 722 ------KRKNGNYLEWIRDYIVA-KYAHNTGIIYC----HSKQLCEQTSEKLNMWGLKTS 770
Query: 326 -------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
ER +Q+ + G + +I ATI+FGMGID+ +VRFV+H +P S+ YYQE+
Sbjct: 771 FYHAGMGPTERFDIQKKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQET 830
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG S C +++S +SL+ +I+ D+ RE E +++YCE
Sbjct: 831 GRAGRDGKPSECIMFYSYKDARSLQSMIQRDSDLDRESRENHLNKLRQVVQYCE 884
>gi|332707801|ref|ZP_08427828.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
gi|332353504|gb|EGJ33017.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
Length = 709
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/408 (33%), Positives = 203/408 (49%), Gaps = 51/408 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG D F+ Q+ I L+ D+ + MPTG G + + + PG
Sbjct: 7 LEHALKHFFGHDCFRPGQQQ--IIEEALQNQDLLIIMPTGG----GKSLCYQLPALLKPG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAI 154
+ +SP++S +D TS+ G + + Q ++ AI
Sbjct: 61 LTVV-----------VSPLISLM----QDQVTSLEDNGIGATFINSTLSFQQMRSREAAI 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
LE +IKLLYV+PER + E F L + + +DEAHCVS+WGHDFRP
Sbjct: 106 LEG------KIKLLYVSPERLLAEQFIPFLDRVRSQIGIPTFAIDEAHCVSQWGHDFRPD 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L LR NS ++ALTATA V+QDII L+ +P KV S R NL+YDV
Sbjct: 160 YRQLKLLRNRYPNS-SVLALTATATNRVQQDIIQQLELRQP-KVHIASFNRPNLYYDV-- 215
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ SY ++ L + GI+YC +R ++A L+ +
Sbjct: 216 QPKQRQSY-------QQLLKQIRSHQGSGIVYCTSRRSVEEVAFRLQNDGISALPYHGGM 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R+ Q F+R ++ VI AT++FGMGI++ +VRFV+H+ +P +I +YYQESGRAGRD
Sbjct: 269 TDKARATNQNRFIRDDVRVIVATVAFGMGINKPDVRFVIHYDLPRNIESYYQESGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
G + C + +S L Y+I K +++ + N +++Y E
Sbjct: 329 GEPATCTVLYSASDISKLHYLIDQKPDPKEQRIAYQQLN--QIVDYAE 374
>gi|261213176|ref|ZP_05927459.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
gi|260837594|gb|EEX64288.1| ATP-dependent DNA helicase RecQ [Vibrio sp. RC341]
Length = 620
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNNIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 206/406 (50%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVRIPPGADFI 99
FG SF+ Q +AI LL D F+ MPTG + + VSA V I P I
Sbjct: 631 FGLHSFRTN-QLEAINAALL-GEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLI 688
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + L+ D ++ +TG D+ T + +L
Sbjct: 689 IDQVQK--------------LKTLDIASTYLTG--DI----------TDADASKTYMQLS 722
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 723 KKDPIIKLLYVTPEKVCASNRLLSALENLYNRKLLARFVIDEAHCVSQWGHDFRKDYKRL 782
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ +S+P++ALTATA P V++DI + L+ KP +VF S R NL YDV+
Sbjct: 783 NMLRK-KFHSVPMMALTATANPRVQKDIQNQLEMLKP-QVFTMSFNRHNLKYDVLPKKPK 840
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K + + E+I+K D+ GIIYC +R H D A+ +K +
Sbjct: 841 KVAMDCL-EWIKKYHPHDS-----GIIYCLSR-HECDTTAAILQKEGLAALAYHAGLTDS 893
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ+ ++ E VI ATI+FGMGID+ +VR+V+H +P SI YYQESGRAGRDG
Sbjct: 894 NRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGE 953
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 954 MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 999
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 219/420 (52%), Gaps = 56/420 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
+++ + LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 242 KDVKSVLKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------- 292
Query: 93 PPGADFILNGNVRSRNGWISPILS-----SFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ +G R ISP+LS ++LR + K ++ G + + + I+S +
Sbjct: 293 -----IVKSGTTRGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLS 347
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCV 204
++ + I+LLY+TPE + L+++L R N +LA IV+DEAHCV
Sbjct: 348 SSDAEG----------HIELLYITPE--MVNKNQTLIRNLERLNNRHRLARIVIDEAHCV 395
Query: 205 SEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
S+WGHDFRP Y+ LG LR Q G +P++ALTATA +VK D+I LK + +F S
Sbjct: 396 SQWGHDFRPDYKELGGLRAQLPG--VPMMALTATATENVKVDVIHNLKM-EGCDIFTQSF 452
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R NL Y+V + A + + I K + N GI+YC +R+ +A +LR
Sbjct: 453 NRPNLTYEVRQKKKGNELLASIADTI-----KSSYHNKSGIVYCLSRDTCQKVAKSLRDD 507
Query: 324 -----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ER+ VQ+ + G +VI ATI+FGMGID+ +VRFV+H +P S+
Sbjct: 508 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLE 567
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG +S C +Y+ ++ +I + +K +Q + + +++++CE
Sbjct: 568 GYYQETGRAGRDGKRSGCYMYYCYRDSMTITRMIDSSDGSK-QQKNRQRQMLRNVVQFCE 626
>gi|375014002|ref|YP_004990990.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
gi|359349926|gb|AEV34345.1| ATP-dependent DNA helicase RecQ [Owenweeksia hongkongensis DSM
17368]
Length = 731
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 199/380 (52%), Gaps = 57/380 (15%)
Query: 39 KLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADF 98
+LK FGFD FK ++A+ + ++ +D FV MPTG G + + + G
Sbjct: 9 ELKKYFGFDQFKG--NQEAVINNVIAGNDTFVIMPTGG----GKSMCYQLPALMQSGTAI 62
Query: 99 ILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKAILEE 157
+ +SP+++ ++ + G S+ + + ++ S TK + + + E+
Sbjct: 63 V-----------VSPLIA-----LMKNQVDSIRGFSEEHGVAHVLNSSLTKGQTEQVKED 106
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+R KLLYV PE E LQ +++ +DEAHC+SEWGHDFRP YR
Sbjct: 107 IR--NGITKLLYVAPESLTKEENIEFLQGC----DISFYAIDEAHCISEWGHDFRPEYRN 160
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L + G P+IALTATA P V+ DI L + +VFK S R NL+Y+V
Sbjct: 161 LKNIITAIGRK-PVIALTATATPKVQGDIQKNLGMDDA-QVFKASFNRPNLYYEV----- 213
Query: 278 LKDSYAHVK----EFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RK 323
+ HV +FI+ +GK GIIYC +R+ +LA+ L+
Sbjct: 214 -RPKTEHVDRDIIKFIKGHMGK------SGIIYCLSRKKVEELAETLQVNGINALPYHAG 266
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R R Q++F+ E +VI ATI+FGMGID+ +VRFV+H+ MP S+ +YYQE+GRAGR
Sbjct: 267 LDAKSRVRHQDAFLMEEADVIVATIAFGMGIDKPDVRFVMHYDMPKSLESYYQETGRAGR 326
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + C +++ + LE
Sbjct: 327 DGGEGICIAFYAYKDIEKLE 346
>gi|417854228|ref|ZP_12499548.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338218289|gb|EGP04066.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 632
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 170/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT TE + + + +L+ +KLLYV+PE+ +T SF HL+ + K++++ +DEAHC
Sbjct: 110 SSQTFTEQQQV--QNKLMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y ++ + + +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLV------EKFKPMEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ +R +VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +
Sbjct: 273 GVSAQAYHAGLETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ + + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 198/382 (51%), Gaps = 49/382 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG++SF+ ++ I L D+ V MPTG + + A
Sbjct: 15 LEDALKHFFGYESFRP--GQREIVEAALDRRDVMVIMPTGGGKSLCFQLPA--------- 63
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ-TKTENKAI 154
+LN V S ++S +D S+ L +SG+ ++ I
Sbjct: 64 ---LLNSGV-------SVVVSPLIALMQDQVASLQKNGVGATFLNSSISGEEVRSRQNEI 113
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L+ RIKLLYV PER + E F L + + L+ V+DEAHCVSEWGHDFRP
Sbjct: 114 LD------GRIKLLYVAPERLLNEQFLLWLNDVRQQVGLSTFVIDEAHCVSEWGHDFRPE 167
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L ++RQ +P++ALTATA V+QD+ L +PY V S R NL+Y+V
Sbjct: 168 YRQLLQIRQ-RFPEVPVMALTATATDRVRQDMGEQLALRQPY-VHIASFNRPNLYYEVRP 225
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
K+SY + + I G +C I+YC +R +L L+++ +
Sbjct: 226 KG--KNSYDELLQKIRHVEG------SC-IVYCLSRRRVNELTTRLQQEGIEALPYHAGL 276
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ R+ Q F+R ++ VI ATI+FGMGI++ +VR V+H+ +P +I AYYQESGRAGRD
Sbjct: 277 SDDVRTENQTRFIRDDVRVIVATIAFGMGINKPDVRLVMHYDLPRNIEAYYQESGRAGRD 336
Query: 385 GLQSYCRIYHSEHSKKSLEYVI 406
G + C +++ KSL+++I
Sbjct: 337 GETAQCLLFYGPGDIKSLDWII 358
>gi|37528437|ref|NP_931782.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787875|emb|CAE16992.1| ATP-dependent DNA helicase RecQ [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 608
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 200/366 (54%), Gaps = 53/366 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ + +L D V MPTG G + + + G +
Sbjct: 17 LRKTFGYLQFRSGQQQ--VIDTILEGRDCLVIMPTGG----GKSLCYQIPALVQEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + + S Q + + ++ R
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRANGVAADCLNSTQAREQQIDVIRRCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLY+ PER + ++F L+ L+ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGMIKLLYIAPERLMMDNF---LEQLLEWQP-AMLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LRQ ++P+IALTATA+ + + DI+ +L N P + S+F R N+ Y +I
Sbjct: 167 QLRQ-RFPTLPVIALTATADETTRNDIVRLLNLNNP--LIHISSFDRPNIRYTLI----- 218
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ Y + + G+ K+ GI+YC +R ++++ L+++ ++ +
Sbjct: 219 -EKYKPLDQLWLFIRGQKGKS---GIVYCNSRSRVEEISERLQKRGLSVAPYHAGLDNSQ 274
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+RVQ++F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 275 RARVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPA 334
Query: 389 YCRIYH 394
+++
Sbjct: 335 EAVLFY 340
>gi|126179265|ref|YP_001047230.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862059|gb|ABN57248.1| ATP-dependent DNA helicase, RecQ family [Methanoculleus marisnigri
JR1]
Length = 419
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 177/325 (54%), Gaps = 38/325 (11%)
Query: 140 ELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVD 199
E + S + + IL EL+ + I++LYV+PE+AV E F L+ L + I VD
Sbjct: 84 EALNSSGSYAATRRILSELK--EGLIQILYVSPEKAVGEDFIDLMASL----PVTLIAVD 137
Query: 200 EAHCVSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
EAHC+S WGH FRP YR L L++ F G +P++ALTATA P V+ DI L + P V
Sbjct: 138 EAHCISMWGHQFRPEYRSLSVLKERFPG--VPMVALTATATPDVRDDIARQLNLSDP-SV 194
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
+ S R NL Y V+ + +D+Y ++ ++ + + GI+Y TR+ LA
Sbjct: 195 YVGSFNRENLRYVVVGKE--EDAYERLRAYLR------GRRGDAGIVYVATRDGAETLAA 246
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
LR + R Q+ F+ G++ V+ AT +FGMGID+ +VRFVVH+ MP
Sbjct: 247 RLRAGGIPALPYHAGMTAAARRETQDRFIGGKVPVVCATSAFGMGIDKPDVRFVVHYDMP 306
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSML 428
++ AYYQESGRAGRDG +S C +Y+S+ + L I D +++ Q ++ SM+
Sbjct: 307 KTLEAYYQESGRAGRDGKESDCILYYSDEDARRLRSFIDRDLASE-FQRKVARSKLQSMV 365
Query: 429 EYCEQ---------GYFLVILVFPC 444
+YC GYF + PC
Sbjct: 366 DYCTTTECRRKALLGYFGERIEEPC 390
>gi|124484849|ref|YP_001029465.1| hypothetical protein Mlab_0020 [Methanocorpusculum labreanum Z]
gi|124362390|gb|ABN06198.1| ATP-dependent DNA helicase, RecQ family [Methanocorpusculum
labreanum Z]
Length = 493
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 174/304 (57%), Gaps = 27/304 (8%)
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
+E + S QT E + + +++R ++++LYV+PERAVT +F L K+A V
Sbjct: 84 VETLNSLQTYDERRRVEQDMR--DGKVRILYVSPERAVTPAFFATLSGC----KVALFAV 137
Query: 199 DEAHCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
DEAHC+S WGH FRP YR + LR +F G +PI A TATA V++DI++ L+ N P +
Sbjct: 138 DEAHCISMWGHQFRPEYREIKHLRDKFPG--VPIAAFTATATLRVREDIVNELRLNDPAE 195
Query: 258 VFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA 317
F S R NL Y V + + + ++ ++ GIIYC +R T +LA
Sbjct: 196 -FIGSFDRRNLRYSVFAEPNAQVRMQKIISYVTA------HKDDPGIIYCFSRASTEELA 248
Query: 318 DALRR----------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGM 367
+ LR+ + ERSRVQE F+ I VI AT++FGMGID+ +VR+V+H M
Sbjct: 249 ERLRKVHIMANPYHAGLPTPERSRVQEGFLNNSIRVICATVAFGMGIDKPDVRYVIHAHM 308
Query: 368 PSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSM 427
P I +YYQE+GRAGRDG C +++S ++ +E +++ + + K++ E+ + M
Sbjct: 309 PKDIESYYQETGRAGRDGKAGECLLFYSGGDRRKIENMLEREFTDKKKS-EIAREKLDQM 367
Query: 428 LEYC 431
YC
Sbjct: 368 YAYC 371
>gi|332159828|ref|YP_004296405.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386310846|ref|YP_006006902.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418243645|ref|ZP_12870111.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|420261107|ref|ZP_14763764.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|433548693|ref|ZP_20504742.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
gi|318607629|emb|CBY29127.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664058|gb|ADZ40702.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862578|emb|CBX72731.1| ATP-dependent DNA helicase recQ [Yersinia enterocolitica W22703]
gi|351776862|gb|EHB19136.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|404511396|gb|EKA25274.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|431790342|emb|CCO67782.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica IP 10393]
Length = 616
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 219/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 6 VINRELLAEQVLRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQI 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP++S + D + G L S QT+
Sbjct: 60 PALVTDGLTLV-----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ A+++ R +IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WG
Sbjct: 102 EQQLAVMDGCR--SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+Q N +P+IALTATA+ + + DI+ +L ++P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLKQRFPN-LPVIALTATADEATRGDIVRLLNLDQP--LIQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D L + F++ GK GIIYC +R D L+
Sbjct: 213 IRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|33151690|ref|NP_873043.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
gi|33147911|gb|AAP95432.1| ATP-dependent DNA helicase [Haemophilus ducreyi 35000HP]
Length = 601
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 61/402 (15%)
Query: 34 QELTAK----LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
QEL +K L +FG+ F+ Q+ + +L D V M TG + V A
Sbjct: 2 QELFSKAKDVLNNIFGYQHFRNGQQE--VIEAVLTGQDCLVIMTTGGGKSLCYQVPA--- 56
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLE--LIVSGQT 147
L G I+ ++S +D ++T Y +E I QT
Sbjct: 57 --------LCLEG--------ITLVISPLISLMKDQVDQLLT-----YGIEAGYINCSQT 95
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
E + + E + + ++KLLY++PE+ +T++F + H K++ IVVDEAHCVS+W
Sbjct: 96 FEEQQRV--EQKALSGQLKLLYLSPEKVMTQAFFSFIFHC----KISLIVVDEAHCVSQW 149
Query: 208 GHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y LG LR+ F G IP++ALTATA+P+ ++DI+ L PY + S R
Sbjct: 150 GHDFRPEYALLGRLRKTFVG--IPLMALTATADPTTRKDILQHLCLTNPY-TYLGSFDRP 206
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-RKVN 325
N+ Y V + + +++ + L + K+ GIIYC +R+ ++++ L RK++
Sbjct: 207 NIRYTV------QQKFKPLEQLTQFILRQQGKS---GIIYCNSRKKVEEISEKLAARKIS 257
Query: 326 K---------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
+R VQE+F R I ++ ATI+FGMGI++ NVRFVVH+ +P SI AYYQ
Sbjct: 258 VMGYHAGMPVQQREMVQEAFQRDNIQIVVATIAFGMGINKSNVRFVVHFDLPRSIEAYYQ 317
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
E+GRAGRD L S ++++ +E + + T + Q++
Sbjct: 318 ETGRAGRDDLPSEAVLFYNPSDYAWMEKTLLEEPETDQRQIK 359
>gi|167622376|ref|YP_001672670.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
gi|167352398|gb|ABZ75011.1| ATP-dependent DNA helicase RecQ [Shewanella halifaxensis HAW-EB4]
Length = 607
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/406 (32%), Positives = 217/406 (53%), Gaps = 54/406 (13%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
S +L++ L+++FG+ +F+ E Q++ I I D V MPTG G + +
Sbjct: 9 SVDQLSSTLQSVFGYRTFR-EGQREVIEQICA-GQDCLVIMPTGG----GKSLCYQLPAL 62
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTE 150
I PG + +SP++S +D S++ TG S Y + S + E
Sbjct: 63 IMPGLTVV-----------VSPLIS----LMKDQVDSLIQTGVSAAY----LNSSLPREE 103
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ +L+++R + +KLLYV+PER + SF L L ++ +DEAHC+S+WGHD
Sbjct: 104 SLQVLQKMRYGE--LKLLYVSPERLLQASFIDRLHEL----NVSLFAIDEAHCISQWGHD 157
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y LG LRQ +PI+ALTATA+ + + DI L P+ + TS R N+ Y
Sbjct: 158 FRPEYAALGRLRQ-QFPQVPIMALTATADKATRADICERLTIT-PHSLL-TSFDRPNIRY 214
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK---- 326
V ++ +++F+ D + GI+YC +R ++A+ LR + ++
Sbjct: 215 TVAEK---LNAANQLRQFV------DAQNGTSGIVYCSSRRRVDEVAERLRLQGHQAEAY 265
Query: 327 ------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER+ VQ+ F++ +++++ AT++FGMGI++ NVR+VVH+ +P S+ AYYQE+GR
Sbjct: 266 HAGKTQEERADVQDRFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKSVEAYYQETGR 325
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
AGRDGL S + + ++I+ ++Q+E N ++
Sbjct: 326 AGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|254291619|ref|ZP_04962408.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
gi|150422476|gb|EDN14434.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae AM-19226]
Length = 620
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L +++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLEEKPDGAQKQVE 376
>gi|261493662|ref|ZP_05990181.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261310662|gb|EEY11846.1| ATP-dependent helicase RecQ [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 599
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 210/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ + Q++ I +L D V M TG + V A
Sbjct: 9 LNNIFGYQKFR-DGQEEVINAVL-ENRDCLVIMTTGGGKSLCYQVPA-----------LC 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G I+ ++S +D ++T + L S QT E + + E +
Sbjct: 56 LDG--------ITLVISPLISLMKDQVDQLITNGIEAAYLN---STQTLEEQQFV--EQK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T+ F H + K+++I VDEAHCVS+WGHDFRP Y LG
Sbjct: 103 ALSGQLKLLYLSPEKVMTQGFF----HFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR T ++P++ALTATA+P+ + DI+ L+ N P+ ++ S R N+ Y V +
Sbjct: 159 GLRN-TFPNVPLMALTATADPTTRSDILHHLRLNSPH-IYLGSFDRPNIRYTV------Q 210
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-RKVNK---------HER 329
+ + +++ I+ + K+ GI+YC +R+ ++ + L RK++ +R
Sbjct: 211 EKFKPLEQLIKLISKQQGKS---GIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ +F R +I ++ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L S
Sbjct: 268 ERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ + +++ ++
Sbjct: 328 AVLFYDPSDYAWLQKILLEEPESEQRNIK 356
>gi|436833691|ref|YP_007318907.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384065104|emb|CCG98314.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 742
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 205/395 (51%), Gaps = 55/395 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK +FGF F+ + ++ I H +L + FV MPTGA G + + G
Sbjct: 12 LKERLKEIFGFSQFRGD--QETIIHNILAGKNTFVIMPTGA----GKSLCYQLPAIASEG 65
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ K + + + + S +KTE +
Sbjct: 66 TAIV-----------ISPLIALM-------KNQVDQLNAFGINAQFLNSTLSKTEMTKVK 107
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ + +KLLY+ PE E L+ V ++++ +DEAHC+SEWGHDFRP Y
Sbjct: 108 KDT--LNGTLKLLYIAPESLTKEENLDFLKKAV----ISFVAIDEAHCISEWGHDFRPEY 161
Query: 216 RRLGELRQFTGN-----SIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
R++ + G+ +P+IALTATA P V+QDI L VFKTS R NL+Y
Sbjct: 162 RKIRGIVDNIGHHSGRMGLPVIALTATATPKVQQDIQKNLNMEDA-DVFKTSFNRKNLYY 220
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNK 326
++ K K I+ K NK + GI+YC +R+ D+A+ LR R +
Sbjct: 221 EI------KPKVDAKKALIKYV--KHNKGKS-GIVYCLSRKTAEDIAELLRVNDVRALPY 271
Query: 327 HE----RSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
H ++R+ Q++F+ E++V+ ATI+FGMGID+ +VRFV+H+ P S+ YYQE+GR
Sbjct: 272 HAGLDPQTRIANQDAFLNEEVDVVCATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGR 331
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
AGRDGL+ C +++S LE K T+R+
Sbjct: 332 AGRDGLEGNCIMFYSYDDIVKLEKFNKDKPVTERD 366
>gi|167763147|ref|ZP_02435274.1| hypothetical protein BACSTE_01517 [Bacteroides stercoris ATCC
43183]
gi|167698441|gb|EDS15020.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 604
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 209/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL +D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIL-DGNDALVLMPTGG----GKSICYQLPALLREGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D ++ L S +TEN A+
Sbjct: 59 -----------VSPLIS----LMKDQVEALCANGISAGALN---SSNDETENAALRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGRLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L N P + F +S R NL V
Sbjct: 154 ILHQQFP--HVPIIALTATADKITREDIIRQLHLNHP-RTFISSFDRPNLSLTVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L++ ++
Sbjct: 211 KEKSKTILDFIARHPGES------GIIYCMSRSKTESVAQMLQKHGIRTAVYHAGLSPSL 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTLLFYS-----LADLILLTKFATESGQQNINLEKLQRMQQYAE 363
>gi|134109345|ref|XP_776787.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259467|gb|EAL22140.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1217
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/420 (32%), Positives = 217/420 (51%), Gaps = 61/420 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ KL+ +F +F+ + QK+AI + D+FV MPTG + + A
Sbjct: 376 KEVNQKLRQVFKLPNFR-KHQKEAIDETMA-GRDVFVLMPTGGGKSLTYQLPA------- 426
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGR---SDLYQLELIVSGQTKTE 150
+G R +SP++S +D+T + R + Y +L T+ +
Sbjct: 427 ----ICSSGKTRGVTFVVSPLISLI-----NDQTRHLISRGIPAIAYTGDL-----TQRD 472
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EEL +P K++YVTPE ++ +L+ L++ +LA V+DEAHCVS+WGH
Sbjct: 473 KNLAHEELSKREPITKVVYVTPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGH 532
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFR Y RLGELR+ + G +PI+ALTATA+ V++DII L+ + S R NL
Sbjct: 533 DFRADYLRLGELRRDYPG--VPIMALTATAQNKVQEDIIRSLRIEG-CVCLRQSFNRPNL 589
Query: 269 FYDV------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
Y+V + +++ ++ H +E A GI+YC +R++ +LA LR
Sbjct: 590 HYEVRPKTSSVIQEIV--AFVHTQE-----------ARASGIVYCNSRDNCENLAKKLRE 636
Query: 323 K-----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSI 371
+ K R ++QE + + ++ ATI+FGMGID+ +VR+V+H +P S+
Sbjct: 637 DHGLRAYHYHAGMTKENRRKMQEGWQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRSL 696
Query: 372 PAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
YYQE+GRAGRDG S C +Y+S K + I + R+Q E + + +L YC
Sbjct: 697 EGYYQETGRAGRDGNPSTCILYYSFKDGKKILGQIDQEKDLTRDQKERQKASMQEVLRYC 756
>gi|85858064|ref|YP_460266.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
gi|85721155|gb|ABC76098.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
Length = 619
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 208/405 (51%), Gaps = 57/405 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +FG+D+F+ L ++ I L+R D FV MPTG + + A R PG +
Sbjct: 9 LKKIFGYDAFR--LHQQEIVDGLIRGEDAFVLMPTGGGKSLCYQLPALHR----PGVGIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S ++ + D ++ Y L + TE + +L R
Sbjct: 63 -----------VSPLIS--LMKDQVDSLKAYGVKAAFYNSSL-----SGTEARKVLA--R 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYN--KLAYIVVDEAHCVSEWGHDFRPTYRR 217
L ++ L+Y+ PER ++ F L R N +A +DEAHC+S+WGHDFRP YR+
Sbjct: 103 LHGGKLDLIYIAPERLMSREF------LERLNDIPIALFAIDEAHCISQWGHDFRPEYRQ 156
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG LR IP+IALTATAE ++DI+ L + + + + R N+ Y V+
Sbjct: 157 LGRLRGLF-PEIPLIALTATAEAHTRRDILERLGLRQA-RSYISGFDRPNIRYTVLEK-- 212
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
+ +A + F++ + GI+YC +R+ +A AL +
Sbjct: 213 -RKPFAQLTTFLQP------RYKGTGIVYCLSRQRVEKVAGALTEAGFQAAPYHAGLPAG 265
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R +VQE F+R +I +I AT++FGMGID+ N+R+VVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 266 ARKQVQEDFLRDDIRIIVATVAFGMGIDKSNIRWVVHYDIPKNIESYYQETGRAGRDGLP 325
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ + +I+ + +R ++EL N +M+ Y E
Sbjct: 326 AEALLLFGYGDISLARGLIENSKNPERRRIELHKLN--AMVGYAE 368
>gi|317479553|ref|ZP_07938681.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|316904283|gb|EFV26109.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
Length = 603
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 208/403 (51%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ IRH++ R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEDIIRHLMDR-KDALVLMPTGG----GKSICYQLPALLSEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T ++ + S +TEN ++
Sbjct: 59 -----------VSPLISLM-------KDQVETLCANGIAAGALNSNNDETENASLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q +PIIALTATA+ ++DII L N+P ++F +S R NL V K
Sbjct: 154 ILHQLFPQ-VPIIALTATADKITREDIIKQLHLNQP-RIFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI + G+ GIIYC +R +A L+++ ++ R
Sbjct: 212 EKSKAILDFIARHPGES------GIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATDSGQQSINLEKLQRMQQYAE 363
>gi|123440598|ref|YP_001004592.1| ATP-dependent DNA helicase RecQ [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122087559|emb|CAL10340.1| ATP-dependent DNA helicase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 616
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 137/430 (31%), Positives = 219/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 6 VINRELLAEQVLRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQI 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP++S + D + G L S QT+
Sbjct: 60 PALVTDGLTLV-----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ A+++ R +IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WG
Sbjct: 102 EQQLAVMDGCR--SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+Q N +P+IALTATA+ + + DI+ +L ++P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLKQRFPN-LPVIALTATADEATRGDIVRLLNLDQP--LIQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D L + F++ GK GIIYC +R D L+
Sbjct: 213 IRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|422007125|ref|ZP_16354111.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
gi|414097015|gb|EKT58670.1| ATP-dependent DNA helicase RecQ [Providencia rettgeri Dmel1]
Length = 608
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/413 (30%), Positives = 211/413 (51%), Gaps = 51/413 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ + A+ +L D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFRP--GQDAVIGAILDKRDCLVLMPTGG----GKSLCYQVPALVKEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R + S QT E + I+E
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRLHGVNAACLNSSQTSQEQRQIMELCS 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLYV PER +T+ Y L L +N + + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGEIKLLYVAPERLLTD---YFLSQLAGWN-ITLLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LRQ N +P++ALTATA+ + + DII +L+ ++P V +S R N+ Y ++
Sbjct: 167 QLRQSLPN-VPVMALTATADETTRADIIRLLELHEPL-VHVSSFDRPNIRYTLV------ 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y + + G+ KA GI+YC +R + + L+++ + +R
Sbjct: 219 EKYKPLDQLWFFIKGQKGKA---GIVYCNSRSKVEETTERLQKRGLSVAAYHAGLEAAQR 275
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ++F++ + V+ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG+++
Sbjct: 276 EWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAE 335
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 336 AILFYDPADMAWLRRCLEEKPAGMQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|153809531|ref|ZP_01962199.1| hypothetical protein BACCAC_03849 [Bacteroides caccae ATCC 43185]
gi|423219543|ref|ZP_17206039.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149127839|gb|EDM19062.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392624748|gb|EIY18826.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 601
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 209/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHI+ R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIMSR-QDALVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + +++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVEALQANGIAAGALNSSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGRLKLLYISPEKLLAEK-----DYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PI+ALTATA+ ++DI+ L P + F +S R N+ V
Sbjct: 154 MLHQQFP--QVPIVALTATADKITREDIVRQLHLVHP-RTFISSFDRPNISLTVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++ +
Sbjct: 211 KEKNKAILEFINRHSGES------GIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSAQK 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQDDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTVLFYSLG-----DLILLTKFATESNQQSINLEKLQRMQQYAE 363
>gi|434393955|ref|YP_007128902.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
gi|428265796|gb|AFZ31742.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
Length = 602
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 206/394 (52%), Gaps = 55/394 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L + LK FG+DSF+ ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LESALKHYFGYDSFRPG--QRCIVEQALQNRDLLVVMPTGG----GKSLCFQLPALLKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENKA 153
+ +SP+++ D+ + G + + + +T +A
Sbjct: 61 LTVV-----------VSPLIA-----LMQDQVEALQDNGIGATFINSSLSAYHVRTREQA 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
IL ++KLLY+ PER ++E F L + ++ +DEAHCVSEWGHDFRP
Sbjct: 105 ILSG------KVKLLYIAPERLLSEKFLPFLDLVHHQMGISAFAIDEAHCVSEWGHDFRP 158
Query: 214 TYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
YR+L +LR +F+G +P IALTATA V+QDII L +P V S R NLFY+V
Sbjct: 159 EYRQLQQLRHRFSG--VPTIALTATATERVRQDIIQQLGLVEP-SVHIASFNRQNLFYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K SY + + I + G GIIYC +R ++A L+
Sbjct: 216 --QPKQKQSYQQLLQLIRQQSG-------AGIIYCLSRRRVDEIAFKLKNDGIAALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +R+ Q SF+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ +YYQESGRAG
Sbjct: 267 GLSDRDRTANQTSFIRDDVQVMVATIAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVI--KTDTSTKR 414
RDG + C ++ + K++EY+I K D +R
Sbjct: 327 RDGEPARCTLFLNYGDIKTIEYLIAQKPDPQEQR 360
>gi|395801803|ref|ZP_10481058.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395435992|gb|EJG01931.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 731
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 202/382 (52%), Gaps = 47/382 (12%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVR 91
+E E+ +LK FGF FK LQ++ I IL + FV MPTG G + +
Sbjct: 4 NEIEIHKELKKYFGFSQFKG-LQEQVITSIL-DGKNTFVIMPTGG----GKSLCYQLPAL 57
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G + +SP+++ ++ +I + S+ ++ S TKTE
Sbjct: 58 IQEGTAIV-----------VSPLIA----LMKNQVDAIRSLSSENGIAHVLNSSLTKTEI 102
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+ +++ KLLYV PE E + LQ + ++++ +DEAHC+SEWGHDF
Sbjct: 103 AQVKKDI--TSGLTKLLYVAPESLTKEEYVAFLQSV----PISFVAIDEAHCISEWGHDF 156
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR L + + G +PII LTATA P V++DI+ L FK S R NL+Y+
Sbjct: 157 RPEYRNLRNIIKQLGK-VPIIGLTATATPKVQEDILKNLDMADA-NTFKASFNRPNLYYE 214
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
V K+ + + FI++ GK GIIYC +R+ +A+ L+
Sbjct: 215 V--RTKTKNIESDIIRFIKQHKGK------SGIIYCLSRKKVESIAEVLQVNGISAVPYH 266
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R++ Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRA
Sbjct: 267 AGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRA 326
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + +C Y+S + LE
Sbjct: 327 GRDGGEGHCLAYYSYKDVEKLE 348
>gi|262409277|ref|ZP_06085820.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|262352729|gb|EEZ01826.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
Length = 608
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 207/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D+F+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 11 LKTYFGYDNFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 65 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 105
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 106 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 159
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P + F +S R N+ V
Sbjct: 160 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RTFISSFDRPNISLTVKRGFQA 216
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 217 KEKNKAILEFIHRHGGES------GIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 270
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 271 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 330
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 331 NTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 369
>gi|317477615|ref|ZP_07936833.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316906220|gb|EFV27956.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 604
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 210/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL +D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIL-GGNDALVLMPTGG----GKSICYQLPALLREGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D ++ L S +TEN A+
Sbjct: 59 -----------VSPLIS----LMKDQVEALCANGISAGALN---SSNDETENAALRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L N P ++F +S R NL V
Sbjct: 154 ILHQQFP--QVPIIALTATADKITREDIIKQLHLNHP-RIFISSFDRPNLSLTVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L+++ ++
Sbjct: 211 KEKSKAIIDFIARHPGES------GIIYCMSRSKTESVAQMLQKQGIRAAVYHAGLSPTR 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 325 DTLLFYSLS-----DLILLTKFATDSGQQSINIEKLQRMQQYAE 363
>gi|160888701|ref|ZP_02069704.1| hypothetical protein BACUNI_01119 [Bacteroides uniformis ATCC 8492]
gi|156861600|gb|EDO55031.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
Length = 603
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 208/403 (51%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ IRH++ R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEDIIRHLMDR-KDALVLMPTGG----GKSICYQLPALLSEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T ++ + S +TEN ++
Sbjct: 59 -----------VSPLISLM-------KDQVETLCANGIAAGALNSNNDETENASLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLVEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q +PIIALTATA+ ++DII L N+P ++F +S R NL V K
Sbjct: 154 ILHQLFPQ-VPIIALTATADKITREDIIKQLHLNQP-RIFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI + G+ GIIYC +R +A L+++ ++ R
Sbjct: 212 EKSKAILDFIARHPGES------GIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATDSGQQSINLEKLQRMQQYAE 363
>gi|422019090|ref|ZP_16365640.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
gi|414103632|gb|EKT65206.1| ATP-dependent DNA helicase RecQ [Providencia alcalifaciens Dmel2]
Length = 608
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 217/417 (52%), Gaps = 59/417 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ + A+ +L D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFRP--GQDAVIGGILDGRDCLVLMPTGG----GKSLCYQVPALVKQGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + + + + S QT E + I+E+
Sbjct: 71 -----------VSPLISLM-------KDQVDQLKLHGVEAACLNSSQTSLEQRQIMEQC- 111
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +IKLLYV PER +T+ Y +Q L ++ +A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 112 -TQGKIKLLYVAPERLLTD---YFIQQLESWD-IALLAVDEAHCISQWGHDFRPEYRSLG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LR+ N +P++ALTATA+ + + DI+ +L+ N P + S+F R N+ Y ++
Sbjct: 167 QLRRALPN-VPVMALTATADETTRADIVRLLELNDP--LIHVSSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + + FI+ GK GI+YC +R + A+ L+++ +
Sbjct: 219 -EKYKPLDQLWFFIKAQKGKS------GIVYCNSRSKVEETAERLQKRGLSVAAYHAGLE 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ++F + + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG
Sbjct: 272 NAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDG 331
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ +++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 332 VEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|374385084|ref|ZP_09642594.1| RecQ family ATP-dependent DNA helicase [Odoribacter laneus YIT
12061]
gi|373226614|gb|EHP48937.1| RecQ family ATP-dependent DNA helicase [Odoribacter laneus YIT
12061]
Length = 654
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 213/408 (52%), Gaps = 54/408 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G++ F+ LQ++ +R ++ D MPTG + ++A ++ G +
Sbjct: 22 LKQYWGYEDFRS-LQEEIVRSVIA-GKDTLALMPTGGGKSLTYQIAALAK----EGMCVV 75
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
I+P+++ + D K ++ E I +G ++ + ++IL +
Sbjct: 76 -----------ITPLIALMKDQVEDLKHRGISA-------EAIYTGMSREQAESILN--K 115
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++K LY++PER +E F L+ + K+ VDEAHC+S+WG+DFRPTY R+
Sbjct: 116 CIGAKMKFLYISPERLASEKFRVRLKQM----KICLFAVDEAHCISQWGYDFRPTYLRIA 171
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
E+R F + P++ALTATA P V +DI LKF P+ V S R N+ Y V
Sbjct: 172 EIRTFFPGA-PVLALTATATPVVTEDIQKQLKFAAPH-VLSKSFRRENIAYIV------- 222
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
V++ + + L K + C I+Y R RE LA+ L +N +R
Sbjct: 223 ---RKVEDKLGELLHILQKLSACAIVYTRKRETAEQLANFLNGNKIKADFYHAGLNTQQR 279
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ QE + + E+ V+ AT +FGMGID+ +VR V+H+ +P S+ AY+QE+GRAGRDG ++Y
Sbjct: 280 EKKQEKWKQDEVPVMVATNAFGMGIDKPDVRIVIHFDIPDSLEAYFQEAGRAGRDGKKAY 339
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKR--EQLELKFKNYLSMLEYCEQGY 435
+ +++ + +L+ I D K+ +Q+ NY + E QGY
Sbjct: 340 AVLLYNQAALTALKTRITKDFPEKKYIKQVYECLGNYFQIAEGSGQGY 387
>gi|294644712|ref|ZP_06722461.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294805927|ref|ZP_06764794.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|292639975|gb|EFF58244.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294446809|gb|EFG15409.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
Length = 621
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 207/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D+F+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 24 LKTYFGYDNFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 77
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 78 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 118
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 119 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 172
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P + F +S R N+ V
Sbjct: 173 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RTFISSFDRPNISLTVKRGFQA 229
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 230 KEKNKAILEFIHRHGGES------GIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 283
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 284 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 343
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 344 NTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 382
>gi|423305643|ref|ZP_17283642.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423309812|ref|ZP_17287802.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|392680875|gb|EIY74239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392683916|gb|EIY77249.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 603
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 208/403 (51%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ IRH++ R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEDIIRHLMDR-KDALVLMPTGG----GKSICYQLPALLSEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T ++ + S +TEN ++
Sbjct: 59 -----------VSPLISLM-------KDQVETLCANGIAAGALNSNNDETENASLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLAEA-----NYLLRDMHISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q +PIIALTATA+ ++DII L N+P ++F +S R NL V K
Sbjct: 154 ILHQLFPQ-VPIIALTATADKITREDIIKQLHLNQP-RIFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI + G+ GIIYC +R +A L+++ ++ R
Sbjct: 212 EKSKAILDFIARHPGES------GIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATDSGQQSINLEKLQRMQQYAE 363
>gi|373467701|ref|ZP_09558994.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758043|gb|EHO46820.1| ATP-dependent DNA helicase RecQ [Haemophilus sp. oral taxon 851
str. F0397]
Length = 619
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 162/270 (60%), Gaps = 25/270 (9%)
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y +L
Sbjct: 113 KLISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQL 168
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G L+ ++ PI+ALTATA+ + +QDI++ L P++ + S R N+ Y L
Sbjct: 169 GGLKASFPHA-PIMALTATADYATRQDILTHLNLENPHR-YIGSFDRPNIRYT------L 220
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
++ Y +++ L + K+ GIIYC +R +A++LR K +
Sbjct: 221 EEKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAL 277
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 278 RERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPA 337
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 338 EAVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|405119097|gb|AFR93870.1| ATP-dependent DNA helicase hus2/rqh1 [Cryptococcus neoformans var.
grubii H99]
Length = 934
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 216/414 (52%), Gaps = 49/414 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ KL+ +F +F+ + QK+AI + D+FV MPTG + + A
Sbjct: 94 KEVNQKLRQVFKLPNFR-KHQKEAIDETMA-GKDVFVLMPTGGGKSLTYQLPA------- 144
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGR---SDLYQLELIVSGQTKTE 150
+G R +SP++S +D+T + R + Y +L T+ +
Sbjct: 145 ----VCSSGKTRGVTFVVSPLISLI-----NDQTRHLISRGIPAIAYTGDL-----TQRD 190
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EEL +P K++YVTPE ++ +L+ L++ +LA V+DEAHCVS+WGH
Sbjct: 191 KNVAHEELSKREPITKVVYVTPEMMSMGGHIKSILRGLLQRKQLARFVIDEAHCVSQWGH 250
Query: 210 DFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFR Y RLGELR+ + G +PI+ALTATA+ V++DII L+ + S R NL
Sbjct: 251 DFRADYLRLGELRRDYPG--VPIMALTATAQNKVQEDIIRSLRIEG-CVCLRQSFNRPNL 307
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V + + ++E + + +A GI+YC +R++ +LA LR
Sbjct: 308 HYEV-----RPKTSSVIQEIV--AFVRTQEARASGIVYCNSRDNCENLAKKLREDHGLRA 360
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ K R ++QE + + ++ ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 361 YHYHAGMTKENRRKMQEGWQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQE 420
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+GRAGRDG S C +Y++ K + I + R+Q E + + +L YC
Sbjct: 421 TGRAGRDGNPSTCILYYAFKDGKKILGQIDQEKDLTRDQKERQKASMQEVLRYC 474
>gi|345509360|ref|ZP_08788959.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|345454812|gb|EEO52054.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
Length = 602
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 207/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D+F+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDNFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 59 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P + F +S R N+ V
Sbjct: 154 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RTFISSFDRPNISLTVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + G+ GIIYC +R T +A L+++ ++
Sbjct: 211 KEKNKAILEFIHRHGGES------GIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 325 NTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 363
>gi|229527301|ref|ZP_04416694.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
gi|229335309|gb|EEO00793.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 12129(1)]
Length = 620
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCSNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|157963641|ref|YP_001503675.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
gi|157848641|gb|ABV89140.1| ATP-dependent DNA helicase RecQ [Shewanella pealeana ATCC 700345]
Length = 607
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 221/413 (53%), Gaps = 54/413 (13%)
Query: 25 DRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVV 84
D+ S +L++ L+++FG+ +F+ E Q++ I I D V MPTG G +
Sbjct: 2 DQAALDTSVDQLSSTLQSVFGYRTFR-EGQREVIEQICA-GQDCLVIMPTGG----GKSL 55
Query: 85 SARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIV 143
+ + PG + +SP++S +D S++ TG S Y +
Sbjct: 56 CYQLPALVLPGLTVV-----------VSPLIS----LMKDQVDSLIQTGVSAAY----LN 96
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S + E+ +L+++R + +KLLYV+PER + SF L L ++ +DEAHC
Sbjct: 97 SSLPREESLQVLQKMRYGE--LKLLYVSPERLLQASFIDRLHEL----NVSLFAIDEAHC 150
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y LG LRQ +PI+ALTATA+ + + DI L P+ + TS
Sbjct: 151 ISQWGHDFRPEYAALGRLRQ-QFPQVPIMALTATADKATRADICERLTIT-PHSLL-TSF 207
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y V + L ++ +++F+ D + GI+YC +R ++A+ LR +
Sbjct: 208 DRPNIRYTVA-EKL--NAANQLRQFV------DAQNGASGIVYCSSRRRVDEVAERLRLQ 258
Query: 324 VNK----------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ ER+ VQ+ F++ +++++ AT++FGMGI++ NVR+VVH+ +P S+ +
Sbjct: 259 GHQAEAYHAGKTQEERAEVQDKFLKDQLDIVVATVAFGMGINKSNVRYVVHYDIPKSVES 318
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
YYQE+GRAGRDGL S + + ++I+ ++Q+E N ++
Sbjct: 319 YYQETGRAGRDGLDSEALMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 218/420 (51%), Gaps = 56/420 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
+++ + LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 689 KDVKSVLKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------- 739
Query: 93 PPGADFILNGNVRSRNGWISPILS-----SFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ +G R ISP+LS ++LR + K ++ G + + + I+S +
Sbjct: 740 -----IVKSGTTRGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLS 794
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCV 204
++ + I+LLY+TPE + L+++L R N +LA IV+DEAHCV
Sbjct: 795 SSDAEG----------HIELLYITPE--MVNKNQTLIRNLERLNNRHRLARIVIDEAHCV 842
Query: 205 SEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
S+WGHDFRP Y+ LG LR Q G +P++ALTATA +VK D+I LK +F S
Sbjct: 843 SQWGHDFRPDYKELGGLRAQLPG--VPMMALTATATENVKVDVIHNLKMEG-CDIFTQSF 899
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R NL Y+V + A + + I K + N GI+YC +R+ +A +LR
Sbjct: 900 NRPNLTYEVRQKKKGNELLASIADTI-----KSSYHNKSGIVYCLSRDTCQKVAKSLRDD 954
Query: 324 -----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ER+ VQ+ + G +VI ATI+FGMGID+ +VRFV+H +P S+
Sbjct: 955 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLE 1014
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG +S C +Y+ ++ +I + +K +Q + + +++++CE
Sbjct: 1015 GYYQETGRAGRDGKRSGCYMYYCYRDSMTITRMIDSSDGSK-QQKNRQRQMLRNVVQFCE 1073
>gi|254226334|ref|ZP_04919924.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
gi|125621139|gb|EAZ49483.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V51]
Length = 620
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|229524849|ref|ZP_04414254.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
gi|229338430|gb|EEO03447.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae bv. albensis
VL426]
Length = 620
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 214/406 (52%), Gaps = 51/406 (12%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +F SF+ ++ I + +L HD FV MPTG G + + + PG +
Sbjct: 14 KHVFRNPSFR--KHQEEIINTILSGHDCFVLMPTGG----GKSLCYQLPALMSPGVTIV- 66
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
ISP++S + D ++ R Y I + +E + + LR
Sbjct: 67 ----------ISPLVSLMH----DQVYNLNLLRIGAY---CISANTPMSELEEMYSCLRG 109
Query: 161 VKPRI--KLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
VK I +L+Y+TPE+ A ++ +Q + KL+ I++DEAHCVSEWGHDFRP Y+
Sbjct: 110 VKEGINCQLIYITPEKFAHSQRLQNEMQRSFQNGKLSRIIIDEAHCVSEWGHDFRPDYKM 169
Query: 218 LGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
LG L+ + G + I+ALTATA P V++DI ++L+ N+ Y F S R NL Y+V +
Sbjct: 170 LGALKSKLPG--VQIMALTATATPRVRRDIRNILQINEAY-TFMQSFNRPNLRYEVRKKE 226
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNK 326
K S ++ FI K+N GIIYC ++ ++A ++ ++
Sbjct: 227 K-KKSAENIATFI-----KENYPGETGIIYCLSKNRCEEMAAKMQEFKIKALPYHAGLDD 280
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R Q+ + + +VI ATI+FGMGI++ +VRFV+H +P S+ YYQESGRAGRDG
Sbjct: 281 QTRKFNQDQWSNDKTHVIVATIAFGMGINKPDVRFVIHESLPKSMEGYYQESGRAGRDGK 340
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +Y+S +S K + + D K+E + N M+EYCE
Sbjct: 341 ISHCILYYS-YSDKLVHDKMAQDDFDKKENVR---NNLNKMVEYCE 382
>gi|395330800|gb|EJF63182.1| ATP-dependent DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 805
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 176/293 (60%), Gaps = 25/293 (8%)
Query: 143 VSGQTKTENKA-ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
++ +T + ++A L++LR +P I+LLY++PE+ + +LL L + L +VVDEA
Sbjct: 82 LTSETPSRDRAYALQDLRSDEPSIRLLYISPEKYCSTEIRHLLNGLYEKDALNRLVVDEA 141
Query: 202 HCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
HC+SEWGHDFR YRRLG R N IPI+ALTATA +V+QD+I LK +
Sbjct: 142 HCISEWGHDFREEYRRLGSFRDKYPN-IPIMALTATATDTVQQDVIRTLKMSAKRLFVAV 200
Query: 262 STF-RSNLFYDVIFDDLLKDSYAH---VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA 317
F R+NLFY+V + + AH V E+IE + +A++ GI+YCRTR +LA
Sbjct: 201 HPFNRANLFYEVRYQS-NPNPTAHMMDVYEYIENLHRRRGRASS-GIVYCRTRALCDELA 258
Query: 318 DALRRK---VNKHER---SRVQESFMR----------GEINVITATISFGMGIDRQNVRF 361
L +K + R + V + ++ G ++V+ ATI+FGMGID+ +VR+
Sbjct: 259 LFLSKKGIQAKAYHRGLSNAVLDKTLKDWDAGGNGVPGGVDVVCATIAFGMGIDKADVRY 318
Query: 362 VVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR 414
V+H+ +P SI YYQE+GRAGRDGL + C +++S ++ + +D+ +KR
Sbjct: 319 VLHFNLPKSIEGYYQETGRAGRDGLPAKCILFYSREDAARVKQFV-SDSHSKR 370
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 210/401 (52%), Gaps = 45/401 (11%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 514 FGLKSFRPN-QLQVINATLL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 563
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELRLVK 162
ISP+ S + + + + +S +SG+ K + AI +L
Sbjct: 564 -------ISPLKSLIFDQINKLASLDICAKS--------LSGEQKMADVMAIYRDLESQP 608
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 609 PMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVL 668
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
++ N +P IALTATA P V+ DI++ L K K F +S RSNL Y V+ + +
Sbjct: 669 KKRFPN-VPTIALTATATPRVRLDILAQLNL-KNCKWFLSSFNRSNLRYRVLPKKGVS-T 725
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH------ERSR 331
+ +I + A+ GIIYC +R+ + + + R V+ H ER
Sbjct: 726 LDDISRYI-----RSKPAHFSGIIYCLSRKECDETSKKMCKDGIRAVSYHAGLTDTERES 780
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
Q+ ++ G+I VI AT++FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG + C
Sbjct: 781 RQKDWLTGKIRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDMADCI 840
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+Y++ ++ ++ +D + + ++ N ++ YCE
Sbjct: 841 LYYNYSDMLRIKKMLDSDKALQYNVKKIHVDNLYRIVGYCE 881
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 211/415 (50%), Gaps = 48/415 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q+L L FG F+ Q AI L H FV MPTG + + A
Sbjct: 759 QDLRNTLIHRFGLRGFRPG-QLDAINATLGGEH-CFVLMPTGGGKSLCYQLPA------- 809
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
I +G + +SP+LS +D+ + R ++ Q LI T+ +
Sbjct: 810 ----VITSGKTQGVTIVVSPLLS-----LMEDQVTSAMERFNV-QAFLINGESTQAQKTH 859
Query: 154 ILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
I+E LR P+ ++LLYVTPE + + Q L +LA IV+DEAHCVS+WGHD
Sbjct: 860 IMEGLRERDPQKFMQLLYVTPEMLSKNQRMISAFQQLHSRRRLARIVIDEAHCVSQWGHD 919
Query: 211 FRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
FRP Y+ LG++ RQF G +P+IALTATA V+ D+++ L + F S R NL
Sbjct: 920 FRPDYKALGDVVRQFPG--VPVIALTATATQLVRTDVVANLGIQG-CRQFSQSFNRPNLS 976
Query: 270 YDVI--FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----- 322
Y+V+ +++ D +KE +K GIIYC +R+ +A+ L
Sbjct: 977 YEVLPKSKNIINDIAKLIKEKHDK---------KSGIIYCLSRKSCEQVAEKLSNLGISA 1027
Query: 323 -----KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
+ ERS VQ + E +VI ATI+FGMGID+ +VR+VVH +P S+ YYQE
Sbjct: 1028 FHYHAGMEPAERSAVQRKWQHNEYHVIVATIAFGMGIDKADVRYVVHHTLPKSLEGYYQE 1087
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +Y+ +SL +I D EQ + S++++CE
Sbjct: 1088 TGRAGRDGKRSDCYLYYQYGDCRSLRKMID-DGEGSWEQKQRLHDMLRSVIQFCE 1141
>gi|282878161|ref|ZP_06286958.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
gi|281299739|gb|EFA92111.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
Length = 725
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 198/379 (52%), Gaps = 49/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT KLK FGFD+FK E Q+ I+H LL + FV MPTG G + + I G
Sbjct: 7 LTEKLKLYFGFDAFKGE-QEAIIKH-LLAGNSAFVLMPTGG----GKSLCYQLPSLIMKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ +SP+++ ++ ++ G S+ + + S K + +
Sbjct: 61 TAIV-----------VSPLIA-----LMKNQVDVINGISEEEGVAHFLNSSLNKAAIQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE E L+ + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 MDDVR--SGRTKLLYVAPESLNKEENIEFLKTV----KISFYAIDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR + G++ P+IALTATA V+ DI L + FK+S R NL+Y+V
Sbjct: 159 YRNIRPTINKIGDA-PVIALTATATDKVRTDIKRSLGIADA-REFKSSFNRPNLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
D + FI + GK GIIYC +R+ +L++ L+ +
Sbjct: 215 RQKASDIDRQIIMFIRQHEGK------SGIIYCLSRKKVEELSEVLKANNIKAAPYHAGL 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRD
Sbjct: 269 DSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C +++ K LE
Sbjct: 329 GGEGICVAFYARKDLKKLE 347
>gi|417819060|ref|ZP_12465679.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|423944442|ref|ZP_17733123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|423973888|ref|ZP_17736668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
gi|340042950|gb|EGR03911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE39]
gi|408662447|gb|EKL33390.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-40]
gi|408666471|gb|EKL37258.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-46]
Length = 611
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|419827881|ref|ZP_14351373.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|419831541|ref|ZP_14355010.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|422915915|ref|ZP_16950269.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|423810983|ref|ZP_17714862.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|423846250|ref|ZP_17718634.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|423878417|ref|ZP_17722265.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|423996324|ref|ZP_17739601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|424015029|ref|ZP_17754887.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|424018140|ref|ZP_17757952.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|424623518|ref|ZP_18062004.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|424628094|ref|ZP_18066413.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|424632040|ref|ZP_18070170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|424635129|ref|ZP_18073161.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|424638950|ref|ZP_18076857.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|424647207|ref|ZP_18084895.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|443526077|ref|ZP_21092179.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
gi|341641612|gb|EGS66137.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02A1]
gi|408017262|gb|EKG54777.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A1]
gi|408022773|gb|EKG59966.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-52A1]
gi|408028170|gb|EKG65081.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A1]
gi|408028453|gb|EKG65344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55A1]
gi|408038274|gb|EKG74625.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A1]
gi|408059843|gb|EKG94584.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-51A1]
gi|408624245|gb|EKK97194.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-1A2]
gi|408637259|gb|EKL09328.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55C2]
gi|408644873|gb|EKL16546.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-60A1]
gi|408646151|gb|EKL17772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59A1]
gi|408652428|gb|EKL23643.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A2]
gi|408855314|gb|EKL95021.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-02C1]
gi|408862584|gb|EKM02091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-55B2]
gi|408871261|gb|EKM10504.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-59B1]
gi|443455544|gb|ELT19309.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-78A1]
Length = 611
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|121587570|ref|ZP_01677336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121728001|ref|ZP_01681040.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|153800796|ref|ZP_01955382.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|153818546|ref|ZP_01971213.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|153821590|ref|ZP_01974257.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|153825932|ref|ZP_01978599.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227080417|ref|YP_002808968.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229507002|ref|ZP_04396510.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229509372|ref|ZP_04398855.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229512489|ref|ZP_04401961.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229516319|ref|ZP_04405767.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229606510|ref|YP_002877158.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254851325|ref|ZP_05240675.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255744009|ref|ZP_05417963.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262153632|ref|ZP_06028759.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|360036832|ref|YP_004938595.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|440712130|ref|ZP_20892755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|449054605|ref|ZP_21733273.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
gi|9654602|gb|AAF93372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121548208|gb|EAX58278.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 2740-80]
gi|121629704|gb|EAX62123.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae V52]
gi|124123627|gb|EAY42370.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-3]
gi|126510885|gb|EAZ73479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae NCTC 8457]
gi|126520877|gb|EAZ78100.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|149740340|gb|EDM54476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MZO-2]
gi|227008305|gb|ACP04517.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae M66-2]
gi|229346745|gb|EEO11715.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC9]
gi|229350488|gb|EEO15436.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TMA 21]
gi|229353687|gb|EEO18624.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae B33]
gi|229356107|gb|EEO21026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BX 330286]
gi|229369165|gb|ACQ59588.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MJ-1236]
gi|254847030|gb|EET25444.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae MO10]
gi|255738274|gb|EET93665.1| ATP-dependent DNA helicase RecQ [Vibrio cholera CIRS 101]
gi|262030573|gb|EEY49210.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae INDRE 91/1]
gi|356647986|gb|AET28041.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str.
2010EL-1786]
gi|439972140|gb|ELP48437.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 4260B]
gi|448265751|gb|EMB02984.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 str. Inaba
G4222]
Length = 620
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|32476457|ref|NP_869451.1| hypothetical protein RB10487 [Rhodopirellula baltica SH 1]
gi|32447002|emb|CAD78908.1| recQ [Rhodopirellula baltica SH 1]
Length = 1002
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 29/283 (10%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
Q L+ S Q+ + ++++EE+ K + L+YV PER F +V ++ +
Sbjct: 113 QARLLNSTQSPGQQESVMEEMAAGK--LDLIYVAPERLRNGRFL----DVVPKANVSLLA 166
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHCVSEWGHDFRP Y RLG R + I LTATA P+V+ DI +L +P +
Sbjct: 167 VDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIGLTATATPTVRDDICELLNLKQP-R 225
Query: 258 VFKTSTFRSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
VF T R+NL + V +D+ K + +++++ K G GIIY TR+ +
Sbjct: 226 VFVTGFARTNLRFTVTPCNNDVAKQNA--LRDYLSKQPG-------AGIIYGATRKRCEE 276
Query: 316 LADALRRKVNK-----------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+A+ L K + ER RVQE+FM+G+++ I AT +FGMGID+ ++RFVVH
Sbjct: 277 IAEWLPEKTGRKVGVYHAGMHPDERRRVQEAFMKGDLSAIVATNAFGMGIDKSDIRFVVH 336
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK 407
+ MP S+ AYYQE+GRAGRDG S C + + ++ E+ I+
Sbjct: 337 YNMPGSLEAYYQEAGRAGRDGEMSQCLLLFAYSDRQIQEFFIE 379
>gi|307152715|ref|YP_003888099.1| RecQ family ATP-dependent DNA helicase [Cyanothece sp. PCC 7822]
gi|306982943|gb|ADN14824.1| ATP-dependent DNA helicase, RecQ family [Cyanothece sp. PCC 7822]
Length = 717
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/397 (33%), Positives = 202/397 (50%), Gaps = 57/397 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D+F+ Q++ I L + D+ V MPTG G + + + PG
Sbjct: 16 LETALKQYFGYDNFRPG-QRQIIEEAL-QNRDLLVIMPTGG----GKSLCFQLPALLKPG 69
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP++S D+ + G T + L
Sbjct: 70 LTVV-----------VSPLIS-----LMQDQVDALLDNG---------IGATFLNSSLGL 104
Query: 156 EELR-----LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
E+R ++K +IKLLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 105 SEIRSREMAILKNKIKLLYVAPERLLSEKFTPFLDKIALDVGISAFAIDEAHCVSEWGHD 164
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L +LRQ S+P+ LTATA V++DII L P V S R NL+Y
Sbjct: 165 FRPEYRQLRQLRQ-RYPSVPMFGLTATATKRVQEDIIVQLGLKNP-GVHIASFNRPNLYY 222
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
DV + SY + ++I G GI+YC +R + ++A L++
Sbjct: 223 DVRPKQ--QRSYDQLLKYIRTQKG-------SGIVYCLSRRNVDEIAFRLQKDGISALPY 273
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ R+ Q F+R + V+ ATI+FGMGI++ +VRFVVH+ +P ++ +YYQESGR
Sbjct: 274 HAGMTDEARTLNQTRFIRDDAQVMVATIAFGMGINKLDVRFVVHFDLPRNLESYYQESGR 333
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
AGRDG + C I+ K +EY+I+ ++ + +++
Sbjct: 334 AGRDGEPAKCTIFLGFGDLKKIEYIIEQKSNPQEKKI 370
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 211/407 (51%), Gaps = 57/407 (14%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 685 FGLKSFRPN-QLQVINASLL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 734
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI---VSGQTK-TENKAILEELR 159
ISP+ K+ I + L L++ +SG+ K + AI +L
Sbjct: 735 -------ISPL-----------KSLIFDQTNKLASLDICAKSLSGEQKLADAMAIYRDLE 776
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++L
Sbjct: 777 AQPPMVKLLYVTPEKISSSARFQDTLDTLNANNYISRFVIDEAHCVSQWGHDFRPDYKKL 836
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD--- 275
G L++ N +P IALTATA P V+ DI++ L K K F +S RSNL Y V+
Sbjct: 837 GILKKRFPN-VPTIALTATATPRVRLDILAQLNL-KHCKWFLSSFNRSNLRYKVMPKKGA 894
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA-----DALRR-----KVN 325
L D +++ A++ GIIYC +R+ D+A D +R +
Sbjct: 895 STLDDISGYIRS---------KPAHSSGIIYCLSRKECDDVAKKMCKDGVRAVAYHAGLT 945
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+ER Q+ ++ G++ VI ATI+FGMGID+ +VRFV+H+ +P SI +YQE+GRAGRDG
Sbjct: 946 DNERETRQKDWLTGKLRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGFYQEAGRAGRDG 1005
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C +Y++ ++ ++ D + + ++ N ++ YCE
Sbjct: 1006 EVADCILYYNYADMLRIKKMLDADKALQYNVKKMHIDNLNRIVGYCE 1052
>gi|421614059|ref|ZP_16055128.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SH28]
gi|408495266|gb|EKJ99855.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SH28]
Length = 1002
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 29/283 (10%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
Q L+ S Q+ + ++++EE+ K + L+YV PER F +V ++ +
Sbjct: 113 QARLLNSTQSPGQQESVMEEMAAGK--LDLIYVAPERLRNGRFL----DVVPKANVSLLA 166
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHCVSEWGHDFRP Y RLG R + I LTATA P+V+ DI +L +P +
Sbjct: 167 VDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIGLTATATPTVRDDICELLNLKQP-R 225
Query: 258 VFKTSTFRSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
VF T R+NL + V +D+ K + +++++ K G GIIY TR+ +
Sbjct: 226 VFVTGFARTNLRFTVTPCNNDVAKQNA--LRDYLSKQPG-------AGIIYGATRKRCEE 276
Query: 316 LADALRRKVNK-----------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+A+ L K + ER RVQE+FM+G+++ I AT +FGMGID+ ++RFVVH
Sbjct: 277 IAEWLPEKTGRKVGVYHAGMHPDERRRVQEAFMKGDLSAIVATNAFGMGIDKSDIRFVVH 336
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK 407
+ MP S+ AYYQE+GRAGRDG S C + + ++ E+ I+
Sbjct: 337 YNMPGSLEAYYQEAGRAGRDGEMSQCLLLFAYSDRQIQEFFIE 379
>gi|417304365|ref|ZP_12091388.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
WH47]
gi|327539317|gb|EGF25938.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
WH47]
Length = 1002
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/283 (38%), Positives = 163/283 (57%), Gaps = 29/283 (10%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
Q L+ S Q+ + ++++EE+ K + L+YV PER F +V ++ +
Sbjct: 113 QARLLNSTQSPGQQESVMEEMAAGK--LDLIYVAPERLRNGRFL----DVVPKANVSLLA 166
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHCVSEWGHDFRP Y RLG R + I LTATA P+V+ DI +L +P +
Sbjct: 167 VDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIGLTATATPTVRDDICELLNLKQP-R 225
Query: 258 VFKTSTFRSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
VF T R+NL + V +D+ K + +++++ K G GIIY TR+ +
Sbjct: 226 VFVTGFARTNLRFTVTPCNNDVAKQNA--LRDYLSKQPG-------AGIIYGATRKRCEE 276
Query: 316 LADALRRKVNK-----------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+A+ L K + ER RVQE+FM+G+++ I AT +FGMGID+ ++RFVVH
Sbjct: 277 IAEWLPEKTGRKVGVYHAGMHPDERRRVQEAFMKGDLSAIVATNAFGMGIDKSDIRFVVH 336
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK 407
+ MP S+ AYYQE+GRAGRDG S C + + ++ E+ I+
Sbjct: 337 YNMPGSLEAYYQEAGRAGRDGEMSQCLLLFAYSDRQIQEFFIE 379
>gi|212710158|ref|ZP_03318286.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
gi|212687157|gb|EEB46685.1| hypothetical protein PROVALCAL_01212 [Providencia alcalifaciens DSM
30120]
Length = 608
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 217/417 (52%), Gaps = 59/417 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L + FG+ SF+ + A+ +L D V MPTG G + + + G +
Sbjct: 17 LNSTFGYQSFRP--GQDAVIGGILDGRDCLVLMPTGG----GKSLCYQVPALVKQGITLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + + + + S QT E + I+E+
Sbjct: 71 -----------VSPLISLM-------KDQVDQLKLHGVEAACLNSSQTSLEQRQIMEQC- 111
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +IKLLYV PER +T+ Y +Q L ++ +A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 112 -TQGKIKLLYVAPERLLTD---YFIQQLESWD-IALLAVDEAHCISQWGHDFRPEYRSLG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LR+ N +P++ALTATA+ + + DI+ +L+ N P + S+F R N+ Y ++
Sbjct: 167 QLRRALPN-VPVMALTATADETTRADIVRLLELNDP--LIHVSSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + + FI+ GK GI+YC +R + A+ L+++ +
Sbjct: 219 -EKYKPLDQLWFFIKAQKGKS------GIVYCNSRSKVEETAERLQKRGLSVAAYHAGLE 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ++F + + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG
Sbjct: 272 NAQREWVQDAFQKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDG 331
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ +++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 332 VEAEAILFYDPADMAWLRRCLEEKPAGMQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|161582034|ref|NP_229853.2| ATP-dependent DNA helicase RecQ [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|379740087|ref|YP_005332056.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|417811271|ref|ZP_12457937.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|417815025|ref|ZP_12461666.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|417822345|ref|ZP_12468945.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|418330899|ref|ZP_12941859.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|418335866|ref|ZP_12944769.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|418342438|ref|ZP_12949250.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|418347611|ref|ZP_12952349.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|418353167|ref|ZP_12955894.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|419824659|ref|ZP_14348170.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|421315437|ref|ZP_15766011.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|421318988|ref|ZP_15769550.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|421323026|ref|ZP_15773559.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|421326494|ref|ZP_15777013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|421330426|ref|ZP_15780911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|421334020|ref|ZP_15784493.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|421337925|ref|ZP_15788367.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|421345358|ref|ZP_15795746.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|421350031|ref|ZP_15800399.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|422890228|ref|ZP_16932668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|422901023|ref|ZP_16936417.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|422905194|ref|ZP_16940063.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|422911938|ref|ZP_16946476.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|422921444|ref|ZP_16954674.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|422924406|ref|ZP_16957463.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|423143466|ref|ZP_17131092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|423148448|ref|ZP_17135818.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|423152234|ref|ZP_17139456.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|423155026|ref|ZP_17142169.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|423158891|ref|ZP_17145869.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|423163555|ref|ZP_17150362.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|423729565|ref|ZP_17702898.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|423745963|ref|ZP_17711086.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|423890179|ref|ZP_17725115.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|423924715|ref|ZP_17729728.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|424000739|ref|ZP_17743841.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|424004900|ref|ZP_17747897.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|424022697|ref|ZP_17762372.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|424025715|ref|ZP_17765344.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|424585089|ref|ZP_18024695.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|424593717|ref|ZP_18033068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|424597647|ref|ZP_18036858.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|424600419|ref|ZP_18039587.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|424605327|ref|ZP_18044303.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|424609045|ref|ZP_18047916.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|424611960|ref|ZP_18050779.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|424615844|ref|ZP_18054548.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|424620598|ref|ZP_18059135.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|424643415|ref|ZP_18081182.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|424651343|ref|ZP_18088878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|424655296|ref|ZP_18092607.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|443502247|ref|ZP_21069249.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443506147|ref|ZP_21072955.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443509985|ref|ZP_21076668.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443513827|ref|ZP_21080381.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443517631|ref|ZP_21084066.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443522220|ref|ZP_21088479.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443529152|ref|ZP_21095173.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443533890|ref|ZP_21099822.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443540108|ref|ZP_21105959.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
gi|340045414|gb|EGR06357.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HCUF01]
gi|340045971|gb|EGR06907.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-49A2]
gi|340049588|gb|EGR10502.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE48]
gi|341626483|gb|EGS51872.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-70A1]
gi|341628175|gb|EGS53450.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48A1]
gi|341628480|gb|EGS53726.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-40A1]
gi|341641806|gb|EGS66325.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HFU-02]
gi|341648893|gb|EGS72908.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae BJG-01]
gi|341649090|gb|EGS73091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-38A1]
gi|356422714|gb|EHH76185.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-06A1]
gi|356423432|gb|EHH76883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-21A1]
gi|356427543|gb|EHH80791.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-19A1]
gi|356434248|gb|EHH87429.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-23A1]
gi|356435779|gb|EHH88928.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-22A1]
gi|356438558|gb|EHH91573.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-28A1]
gi|356444285|gb|EHH97096.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-32A1]
gi|356448332|gb|EHI01104.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43A1]
gi|356451141|gb|EHI03843.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-33A2]
gi|356455360|gb|EHI08003.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-61A1]
gi|356456752|gb|EHI09337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-48B2]
gi|378793597|gb|AFC57068.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae IEC224]
gi|395922926|gb|EJH33739.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1032(5)]
gi|395924346|gb|EJH35149.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1041(14)]
gi|395926264|gb|EJH37052.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1038(11)]
gi|395934825|gb|EJH45562.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1042(15)]
gi|395936113|gb|EJH46842.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1046(19)]
gi|395938083|gb|EJH48781.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1048(21)]
gi|395947099|gb|EJH57756.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-20A2]
gi|395948728|gb|EJH59366.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46A1]
gi|395955138|gb|EJH65741.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-25]
gi|395964752|gb|EJH74949.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-56A2]
gi|395964962|gb|EJH75150.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-57A2]
gi|395967722|gb|EJH77772.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-42A1]
gi|395976765|gb|EJH86206.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-47A1]
gi|395979404|gb|EJH88755.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1030(3)]
gi|395979993|gb|EJH89302.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1047(20)]
gi|408011183|gb|EKG49013.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-39A1]
gi|408018033|gb|EKG55503.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41A1]
gi|408038249|gb|EKG74601.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1040(13)]
gi|408045701|gb|EKG81507.1| ATP-dependent DNA helicase RecQ [Vibrio Cholerae CP1044(17)]
gi|408047549|gb|EKG83162.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1050(23)]
gi|408058109|gb|EKG92929.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A2]
gi|408612488|gb|EKK85827.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1033(6)]
gi|408628389|gb|EKL01142.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A1]
gi|408644451|gb|EKL16136.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-50A2]
gi|408659856|gb|EKL30889.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-77A1]
gi|408660756|gb|EKL31758.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62A1]
gi|408850061|gb|EKL90047.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-37A1]
gi|408850390|gb|EKL90354.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-17A2]
gi|408875954|gb|EKM15091.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-62B1]
gi|408882282|gb|EKM21122.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-69A1]
gi|443433407|gb|ELS75915.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-64A1]
gi|443437237|gb|ELS83336.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-65A1]
gi|443441070|gb|ELS90740.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-67A1]
gi|443444882|gb|ELS98141.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-68A1]
gi|443448736|gb|ELT05353.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-71A1]
gi|443451781|gb|ELT12026.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-72A2]
gi|443459995|gb|ELT27385.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-7A1]
gi|443462939|gb|ELT33958.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-80A1]
gi|443464395|gb|ELT39058.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-81A1]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|392591898|gb|EIW81225.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 777
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 174/295 (58%), Gaps = 27/295 (9%)
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEA 201
+ S T E + I+++L P+ +LLY TPE+ T+ LLQ + +KL +VVDEA
Sbjct: 84 LTSDSTPEERQKIIDDLVYGDPQNRLLYTTPEKLCTKDITRLLQVVYDDHKLNRLVVDEA 143
Query: 202 HCVSEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFK 260
HC+SEWGHDFR YR+LG R +F +P++ALTATA PSV++DII L+ ++
Sbjct: 144 HCISEWGHDFRAEYRKLGHFRDRFP--EVPVMALTATATPSVQRDIIRSLRMDEQNMYKA 201
Query: 261 TSTF-RSNLFYDVIF----DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
F R NLFY+V + D L + A V +FI L + + + GIIYCRTR D
Sbjct: 202 VHPFNRDNLFYEVRYKSGVDPLSR--MAEVLDFI-TTLYRRRERPSSGIIYCRTRATCDD 258
Query: 316 LADALR------RKVNKHERSRVQESFMR---------GEINVITATISFGMGIDRQNVR 360
L+ LR R ++ +S V ++ ++ G ++V+ ATI+FGMGID+ +VR
Sbjct: 259 LSAFLRGKGLSARPYHRGIKSNVLDTTLKQWENGGNGEGGVDVVCATIAFGMGIDKADVR 318
Query: 361 FVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
+V+H+ +P S+ YYQE+GRAGRDG S C +Y+S + ++ D+ KR+
Sbjct: 319 YVIHYDLPHSLEGYYQETGRAGRDGAASRCILYYSREDAYQAQRLV-ADSHIKRQ 372
>gi|422908717|ref|ZP_16943388.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
gi|341638676|gb|EGS63315.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-09]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|423223965|ref|ZP_17210433.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|392637198|gb|EIY31072.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 214/413 (51%), Gaps = 54/413 (13%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K ++ LK FG+DSF+ LQ++ IR LL D V MPTG G + +
Sbjct: 4 KTLSTKMIQTLKRYFGYDSFR-PLQEEIIR-TLLAGRDSLVLMPTGG----GKSICYQLP 57
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + +SP++S +D S+ L S +T
Sbjct: 58 ALLCEGTAVV-----------VSPLIS----LMKDQVESLCANGVAAGALN---SSNDET 99
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EN A+ ++ ++KLLY++PE+ + E+ +YLL+ + ++ +DEAHC+S+WGH
Sbjct: 100 ENAALRRSC--MEGKLKLLYISPEKLIAEA-NYLLRDM----HISLFAIDEAHCISQWGH 152
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y ++G + + N IP+IALTATA+ ++DI+ L N+P KVF +S R NL
Sbjct: 153 DFRPEYAQMGFIHEMFPN-IPVIALTATADKITREDIVRQLHLNQP-KVFISSFDRPNLS 210
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
V K+ + +FI + G+ GIIYC +R T +A L+++
Sbjct: 211 LTVKRGYQQKEKSKAILDFIGRHRGES------GIIYCMSRSKTETVAQMLQKQGFRAAV 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ R Q+ F+ + ++ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE G
Sbjct: 265 YHAGLSSARRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDGL S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 RAGRDGLPSDTLLFYS-----LADLILLTKFATESGQQGINLEKLQRMQQYAE 372
>gi|153216100|ref|ZP_01950274.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
gi|124114476|gb|EAY33296.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae 1587]
Length = 620
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|419835117|ref|ZP_14358565.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|421341784|ref|ZP_15792193.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|421353007|ref|ZP_15803345.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|423733466|ref|ZP_17706697.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|424007762|ref|ZP_17750719.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
gi|395946961|gb|EJH57619.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-43B1]
gi|395955466|gb|EJH66062.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-45]
gi|408632325|gb|EKL04786.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-41B1]
gi|408859258|gb|EKL98919.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-46B1]
gi|408867878|gb|EKM07231.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HC-44C1]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTTEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|229521104|ref|ZP_04410525.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
gi|229341989|gb|EEO06990.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae TM 11079-80]
Length = 620
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTTEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQHGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|288800855|ref|ZP_06406312.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332316|gb|EFC70797.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
Length = 725
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 200/380 (52%), Gaps = 51/380 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT KLK FGFD+FK + Q+ IR+ LL D FV MPTG G + + I G
Sbjct: 7 LTEKLKQYFGFDTFKGD-QEAIIRN-LLDGKDSFVLMPTGG----GKSLCYQLPSLIMDG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ ISP+++ ++ ++ G S+ + I S K +
Sbjct: 61 VAVV-----------ISPLIA-----LMKNQVDVINGISEENGVAHYINSSLNKAAITQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ ++R + KLLYV PE + E+ +L + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 MADIR--SGKTKLLYVAPESLIKPENVEFL-----KTVKISFYAIDEAHCISEWGHDFRP 157
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR + + G + P+IALTATA V+ DI L K FK+S R+NL+Y+V
Sbjct: 158 EYRNIRPMINNIGEA-PVIALTATATDKVRTDIKKSLGILDA-KEFKSSFNRANLYYEV- 214
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL----------ADALRRK 323
D + +FI+K GK GI+YC +R+ +L A A
Sbjct: 215 -RPKTNDVDKELIKFIKKNEGK------SGIVYCLSRKKVEELSAILQANNIKAAAYHAG 267
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFVVH+ +P S+ YYQE+GRAGR
Sbjct: 268 LDNIPRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVVHYDIPKSLEGYYQETGRAGR 327
Query: 384 DGLQSYCRIYHSEHSKKSLE 403
DG + +C ++S + LE
Sbjct: 328 DGGEGHCLAFYSYKDIQKLE 347
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/392 (33%), Positives = 198/392 (50%), Gaps = 47/392 (11%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ +K I + L D+ V MPTG G + + + G
Sbjct: 8 LENALKYFFGYDQFRS--GQKQIINEALNNKDLLVIMPTGG----GKSLCFQLPALLKSG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+++ + + +L D+ S L + EL ++ AIL
Sbjct: 62 VCIVVSPLIALMQDQVDTLL--------DNGIGATFLNSTLNREEL------QSRENAIL 107
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
K +IKLLYV PER + ++F L L + L+ +DEAHCVS WGHDFRP Y
Sbjct: 108 ------KGKIKLLYVAPERLLNDNFLNFLDFLRQKVGLSGFAIDEAHCVSAWGHDFRPEY 161
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+L +LR F +P+ ALTATA V+ DII L P V S R NL+Y+V
Sbjct: 162 RQLKQLR-FRYPQVPMFALTATATKRVRADIIEQLGLQNP-TVHVASFDRPNLYYEV--Q 217
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ + SY + ++ G GIIYC +R++ +A L++ +
Sbjct: 218 EKSRRSYTQLLNYVRSQEGS-------GIIYCLSRKNVETIAFRLQQDGIEALPYHAGMY 270
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ER+ Q F+R ++ +I ATI+FGMGI++ +VRFVVH+ +P ++ +YYQESGRAGRDG
Sbjct: 271 DDERAVNQTRFIRDDVRIIVATIAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRDG 330
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
+ C ++ S K LEY+I K +++
Sbjct: 331 EPANCALFFSFGDLKRLEYLIDQKIDEKEQRV 362
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 205/406 (50%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVRIPPGADFI 99
FG SF+ Q +AI LL D F+ MPTG + + VSA V I P I
Sbjct: 631 FGLHSFRTN-QLEAINAALL-GEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLI 688
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + L+ D + +TG D+ T + +L
Sbjct: 689 IDQVQK--------------LKTLDIAATYLTG--DI----------TDADASKTYMQLS 722
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 723 KKDPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHDFRKDYKRL 782
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ +S+P++ALTATA P V++DI + L+ KP +VF S R NL YDV+
Sbjct: 783 NMLRK-KFHSVPMMALTATANPRVQKDIQNQLEMLKP-QVFTMSFNRHNLKYDVLPKKPK 840
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K + + E+I+K D+ GIIYC +R H D A+ +K +
Sbjct: 841 KVAMDCL-EWIKKYHPHDS-----GIIYCLSR-HECDTTAAILQKEGLAALAYHAGLTDS 893
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ+ ++ E VI ATI+FGMGID+ +VR+V+H +P SI YYQESGRAGRDG
Sbjct: 894 NRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGE 953
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 954 MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 999
>gi|145632079|ref|ZP_01787814.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145634861|ref|ZP_01790569.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
gi|144986986|gb|EDJ93516.1| ATP-dependent DNA helicase [Haemophilus influenzae 3655]
gi|145268027|gb|EDK08023.1| organic solvent tolerance protein [Haemophilus influenzae PittAA]
Length = 619
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/392 (32%), Positives = 206/392 (52%), Gaps = 57/392 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGW---ISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
+G ISP++S ++ + D+ +D + Q + +NK
Sbjct: 68 --------DGLTLVISPLIS--LMKDQVDQLQANGIEADFLNSSQTLEQQQRVQNK---- 113
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
L+ ++KLLYV+PE+ +T SF L+ Y+K+ +I +DEAHC+S+WGHDFRP Y
Sbjct: 114 ---LISGQLKLLYVSPEKVMTNSFF----QLISYSKVCFIAIDEAHCISQWGHDFRPEYT 166
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+LG L+ ++ PI+ALTATA+ + +QDI+ L +K + S R N+ Y
Sbjct: 167 QLGGLKASFPDA-PIMALTATADYATQQDILRHLNLKNLHK-YIGSFDRPNIRYT----- 219
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
L++ Y +++ L + K+ GIIYC +R +A++LR K +
Sbjct: 220 -LEEKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMET 275
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L
Sbjct: 276 AIRERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDL 335
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ +++ L+ ++ T + Q+E
Sbjct: 336 PAEAVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|421254067|ref|ZP_15709061.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
gi|401693064|gb|EJS87299.1| RecQ [Pasteurella multocida subsp. multocida str. Anand1_buffalo]
Length = 632
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 210/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L A+FG+ SF+ + Q++ I L+ D V M TG + +S P F
Sbjct: 30 LHAVFGYQSFR-KGQEEVIDATLM-GKDSLVIMATG---------NGKSLCYQIPALCF- 77
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S +D ++ ++ + + + S QT TE + + + +
Sbjct: 78 -----EGLTLVISPLIS----LMKDQVDQLL---ANGIEADYLNSSQTFTEQQQV--QNK 123
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ +KLLYV+PE+ +T SF HL+ + K++++ +DE HC+S+WGHDFRP Y +LG
Sbjct: 124 LMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDETHCISQWGHDFRPEYTQLG 179
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S R N+ Y ++
Sbjct: 180 GLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSFDRPNIRYTLV------ 231
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ LG+ K+ GIIYC +R +A++LR K + +R
Sbjct: 232 EKFKPIEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQR 288
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L +
Sbjct: 289 EQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAE 348
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L ++ + + Q+E
Sbjct: 349 AVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 212/421 (50%), Gaps = 72/421 (17%)
Query: 43 LFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNG 102
+FG SF+ ++AI + +L D+FV MPTG + + A
Sbjct: 666 VFGNRSFR--PMQRAIINAVLSQRDVFVMMPTGGGKSLCFQLPAVVSG------------ 711
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG-------QTKTENKAIL 155
+ P++S ++T L Q++L+ G Q E KA+
Sbjct: 712 ---GVTVVVMPLVS------------LIT--DQLEQMQLLNVGCRAFAANQPWEEQKAVY 754
Query: 156 EELRLVKPRIKLLYVTPERAVTESF-HYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ELR I LL VTPE+ S L L R +L +DEAHCVS+WG+DFRP
Sbjct: 755 DELRRGDGEINLLLVTPEKLKGSSLLRSCLHELNREGRLDRFAIDEAHCVSQWGNDFRPD 814
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-- 272
YR+L LR+ N +P++ALTATA +V QD+I+ L+ +P VF+ S R NL Y+V
Sbjct: 815 YRQLQSLREEYPN-VPLVALTATATKAVLQDVIAQLRMQEPV-VFQGSFDRPNLRYEVRP 872
Query: 273 -IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR--------- 322
+ +++D +K + GI+YC +R +A+ L++
Sbjct: 873 KVTKRIIEDIATTIKTEFDGL---------SGIVYCLSRRECERVAEGLQKHARISAGFY 923
Query: 323 --KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+++ +R +Q +M +I VI AT++FGMGI++++VRFV+H MP + +YQESGR
Sbjct: 924 HAQLDPEKREEIQRDWMNDDIKVIVATLAFGMGINKRDVRFVIHCAMPKCLENFYQESGR 983
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE--------QLELKFKNYLSMLEYCE 432
AGR+G ++ C ++++ H K+ ++I+ +++ Q +N L ML YCE
Sbjct: 984 AGRNGDEASCILFYNYHDKQRQSHLIQLNSADGPSGCRRHDDGQASRNEENLLPMLAYCE 1043
Query: 433 Q 433
+
Sbjct: 1044 E 1044
>gi|422305600|ref|ZP_16392796.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
gi|408628475|gb|EKL01222.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1035(8)]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCSNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|225011808|ref|ZP_03702246.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
gi|225004311|gb|EEG42283.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
Length = 729
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 207/393 (52%), Gaps = 66/393 (16%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSL---VGSVVSA 86
++ +L LK FGF +FK LQ+ I H +L + FV MPTG SL + +++
Sbjct: 1 MNSDDLKKALKKHFGFSTFKG-LQESVITH-MLNKENSFVIMPTGGGKSLCYQLPALMQE 58
Query: 87 RSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + + P + N + S NG + SS +KT++ +SD
Sbjct: 59 GTAIVVSPLIALMKNQVDAIRGISSENGIAHVLNSSL------NKTAVEQVKSD------ 106
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDE 200
I SG TK LLYV PE + E+ + + K++++ VDE
Sbjct: 107 IRSGITK------------------LLYVAPESLSKRENIDFF-----KSVKISFLAVDE 143
Query: 201 AHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFK 260
AHC+SEWGHDFRP YR L + + IPIIALTATA P V++D++ L+ + ++FK
Sbjct: 144 AHCISEWGHDFRPEYRNLRAILEQLEQPIPIIALTATATPKVQEDVMKNLRISGA-RLFK 202
Query: 261 TSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--- 317
S R NL+Y+V DS + FI++ GK GIIYC +R+ +LA
Sbjct: 203 ASFNRPNLYYEVRPKTGQVDS--DIIRFIKQNSGK------SGIIYCLSRKRVEELAQTL 254
Query: 318 -----DALRRKVNKHERSRV--QESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+AL +SRV Q+ F++ + +VI ATI+FGMGID+ +VRFV+H +P S
Sbjct: 255 QVNGINALPYHAGLDSKSRVNNQDQFLKDDCDVIVATIAFGMGIDKPDVRFVIHHDIPKS 314
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
I +YYQE+GRAGRDG + +C +++ + LE
Sbjct: 315 IESYYQETGRAGRDGGEGHCLAFYAYKDIEKLE 347
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 212/406 (52%), Gaps = 55/406 (13%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
A L+ FG+ F+ LQK I +L +D V MPTG + V A
Sbjct: 8 ATLQQYFGYKQFR-PLQKDIIDQVL-AGNDALVLMPTGGGKSLCYQVPA----------- 54
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
++ G I+ ++S +D ++ R+D+ S QT +E I E
Sbjct: 55 LMMEG--------IAIVVSPLIALMQDQVEAL--QRNDI-AAAFYNSTQTSSEQSEI--E 101
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+ + +IKLLYV+PE+ ++ +F LQ L ++ +DEAHC+S WGHDFRP Y +
Sbjct: 102 RQCMDGKIKLLYVSPEKLLSGTFIEFLQRL----QINLFAIDEAHCISSWGHDFRPEYAQ 157
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L L++ S+P++ALTATA+ + + DI++ L +P + F S R N+ V
Sbjct: 158 LKMLKKVF-PSVPVVALTATADKTTRNDILNQLNLQQP-ETFLASFDRENIRLHV----- 210
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKVNKH 327
+K+ I+ + + N GIIYC +R+ T +A L+ K++ +
Sbjct: 211 -SPGQNRIKKIIKYL---ETRPNQSGIIYCLSRKSTEQIAQKLKDAGFSADYYHAKMDSN 266
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQ+SF++ + ++I ATI+FGMGID+ NVRFV+H+ MP ++ YYQE GRAGRDGL+
Sbjct: 267 RRAAVQQSFLKDDTHIICATIAFGMGIDKPNVRFVIHYNMPKNVEGYYQEIGRAGRDGLK 326
Query: 388 SYCRIYHSEHSKKSL-EYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S +++S K L E++ D + L+F ML++ +
Sbjct: 327 SDAILFYSYGDVKILREFIHNIDNEGFK---ALQFAKLERMLQFAD 369
>gi|262172709|ref|ZP_06040387.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
gi|261893785|gb|EEY39771.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus MB-451]
Length = 620
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L+ D V MPTG + + A R G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIDAALQGRDSLVIMPTGGGKSLCYQIPALVR----EGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S T+ E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLTREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L +L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSNL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNDPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|424589454|ref|ZP_18028911.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
gi|408037483|gb|EKG73878.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae CP1037(10)]
Length = 611
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 200/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|383311275|ref|YP_005364085.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|386835294|ref|YP_006240611.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
gi|380872547|gb|AFF24914.1| ATP-dependent DNA helicase recQ [Pasteurella multocida subsp.
multocida str. HN06]
gi|385201997|gb|AFI46852.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
multocida str. 3480]
Length = 632
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 210/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L A+FG+ SF+ + Q++ I L+ D V M TG + +S P F
Sbjct: 30 LHAVFGYQSFR-KGQEEVIDATLM-GKDSLVIMATG---------NGKSLCYQIPALCF- 77
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S +D ++ ++ + + + S QT TE + + + +
Sbjct: 78 -----EGLTLVISPLIS----LMKDQVDQLL---ANGIEADYLNSSQTFTEQQQV--QNK 123
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ +KLLYV+PE+ +T SF HL+ + K++++ +DEAHC+S+WGHDFRP Y +LG
Sbjct: 124 LMSGTLKLLYVSPEKVMTTSFF----HLISHCKVSFVAIDEAHCISQWGHDFRPEYTQLG 179
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ + PI+ALTATA+ + +QDI+ L P+ V+ S R N+ Y ++
Sbjct: 180 GLKSCFPYA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSFDRPNIRYTLV------ 231
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +++ LG+ K+ GIIYC +R +A++LR K + +R
Sbjct: 232 EKFKPMEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNKGVSAQAYHAGLETAQR 288
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L +
Sbjct: 289 EQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPAE 348
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L ++ + + Q+E
Sbjct: 349 AVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 216/423 (51%), Gaps = 67/423 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI + L D F+ MPTG + + A +
Sbjct: 791 LKERFKLKGFRHH-QLEAI-NATLNGEDAFILMPTGGGKSLCYQLPA-----------VV 837
Query: 100 LNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
+G + +SP+LS + LR + + + G +D E + I
Sbjct: 838 QSGKTKGVTIVVSPLLSLMHDQVEHLRKNSIQAATINGDTD------------SAERREI 885
Query: 155 LEELRLVKPR--IKLLYVTPERAVTESFHY--LLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ LR P I+LLYVTPE V++S +L L + +KLA V+DEAHCVS+WGHD
Sbjct: 886 MNNLRQQHPEQHIQLLYVTPE-MVSQSGQMGDILSSLNQRSKLARFVIDEAHCVSQWGHD 944
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FR Y L LR+ S+PI+ALTATA +VK D+IS L KP +F S R NL+Y
Sbjct: 945 FRKEYIALSRLRK-DFPSVPIMALTATATENVKNDVISNLGMGKP-PIFSQSFNRPNLYY 1002
Query: 271 DV------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV 324
+V +LLK+ V K G+ GIIY +R+ D+A L ++
Sbjct: 1003 EVRPKSGRKMPELLKEIADLV---TRKYRGQ------TGIIYTLSRKGCEDMAKKLSKEF 1053
Query: 325 N-----------KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
N E+++V + G++ V+ ATI+FGMGID+ +VRFV+H+ +P S+
Sbjct: 1054 NISVHYYHAGMKSEEKTKVTRDWQSGKLQVVVATIAFGMGIDKPDVRFVIHYTIPKSLEG 1113
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSL-EYVIKTDTSTKR---EQLELKFKNYLSMLE 429
YYQE+GRAGRDG +S C +Y+S L +++ ++DT + +Q E ++ +M+
Sbjct: 1114 YYQETGRAGRDGKKSGCYLYYSWGDTVMLRKFIFESDTKNDQKSTDQKEREWAMLQTMIG 1173
Query: 430 YCE 432
YC+
Sbjct: 1174 YCD 1176
>gi|298480716|ref|ZP_06998912.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273150|gb|EFI14715.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 621
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 205/404 (50%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D+F+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 24 LKTYFGYDNFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 77
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 78 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 118
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 119 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 172
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P + F +S R N+ V
Sbjct: 173 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RTFISSFDRPNISLTVKRGFQA 229
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + GIIYC +R T +A L+++ ++
Sbjct: 230 KEKNKAILEFIHR------HGEESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 283
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 284 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 343
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 344 NTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 382
>gi|423298844|ref|ZP_17276869.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|408474193|gb|EKJ92712.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 601
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 211/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLSEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + +++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVEGLQANGIAAGALNSSNDETENANLRRSC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V ++KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -VAGKLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L +P + F +S R N+ V
Sbjct: 154 VLHQQFP--QVPIIALTATADKITREDIIRQLHLIRP-RTFISSFDRPNISLTVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI++ GK++ GIIYC +R T +A L ++ ++ +
Sbjct: 211 KEKNKAIIEFIQRH-GKES-----GIIYCMSRSKTETVAQMLLKQGIRCGVYHAGLSAQQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQDDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q ++ + M +Y E
Sbjct: 325 DTVLFYSLG-----DLILLTKFASESSQQKINLEKLQRMQQYAE 363
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 142/411 (34%), Positives = 200/411 (48%), Gaps = 44/411 (10%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ + FG +F+ Q +AI LL D FV MPTG G + + +
Sbjct: 620 QEMLKIFRQRFGLYTFRPN-QLQAINATLL-GFDCFVLMPTGG----GKSLCYQLPALLS 673
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP L S L TS+ + L S T + +A
Sbjct: 674 VGLTIV-----------ISP-LKSLILDQVQKLTSLDIPAAHLS------SSITDNQAEA 715
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
+ EL +P +K+LYVTPE+ + + L L LA V+DEAHCVS+WGHDFR
Sbjct: 716 VYRELAKKEPILKILYVTPEKISASTKLCNTLTILYERELLARFVIDEAHCVSQWGHDFR 775
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P Y+RL LR +P +ALTATA P V+ DI+ L P K F + R NL Y +
Sbjct: 776 PDYKRLKCLRD-NYPKVPTMALTATATPRVRTDILHQLGMTNP-KWFMSGFNRPNLRYSI 833
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
I K E I + K N CGI+YC +R+ D A +++
Sbjct: 834 I----TKKGKNCSDEVIAMIMTK--YRNTCGIVYCLSRKDCDDYAAQMKKNGIKALSYHA 887
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ++RS Q ++ EI+VI ATI+FGMGID+ NVRFV+H +P SI YYQESGRAG
Sbjct: 888 GLTDNQRSNCQGRWIADEIHVICATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAG 947
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
RDG + C +++ + +I+ D + + + N M+ +CE
Sbjct: 948 RDGEIADCILFYHYADMHRIRKMIELDNQSP-QVIGTHMDNLFKMVAFCEN 997
>gi|300708803|ref|XP_002996574.1| hypothetical protein NCER_100319 [Nosema ceranae BRL01]
gi|239605886|gb|EEQ82903.1| hypothetical protein NCER_100319 [Nosema ceranae BRL01]
Length = 529
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 194/372 (52%), Gaps = 45/372 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +F + F+ Q+ I+ IL + D+FV MPTG G + + I G I
Sbjct: 190 LRNVFKLEKFRTN-QESIIKSILEKK-DVFVLMPTGG----GKSLCYQIPALIDNGVTII 243
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+LS + I ++ S +E + +LE +
Sbjct: 244 -----------ISPLLSLVH-------DQISNLLNNNILALPFNSTLNASERRMVLENMT 285
Query: 160 LVKPRIKLLYVTPERAVTE-SFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
L +K+ YVTPE + L+ L+R NKL+ VVDEAHCVS+WGHDFRP Y +
Sbjct: 286 L--GVVKMFYVTPESLCANYNLESKLKELLRMNKLSRFVVDEAHCVSQWGHDFRPDYIEM 343
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
++++ S+PI+ALTATA P V+ DI+S L+ + V+K S R NL Y +
Sbjct: 344 KKIKEMYP-SVPIVALTATATPKVELDIMSNLQI-RDAVVYKQSFNRENLKY------FV 395
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKV---------NKHER 329
K V+ I + + + N CGIIYC +++ ++D L + + K ER
Sbjct: 396 KPKTRSVELDIVTFI-QSHYQNECGIIYCTSKKECEMISDKLNKHLKTAFYHAGLTKKER 454
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+Q + +I ATI+FGMGID+++VRFV+H+ MP S+ YYQE+GRAGRDG +S
Sbjct: 455 MSIQSMWNDNRFKIIVATIAFGMGIDKKDVRFVIHYSMPKSLEGYYQETGRAGRDGKESV 514
Query: 390 CRIYHSEHSKKS 401
C +Y+ KK+
Sbjct: 515 CILYYHYGDKKN 526
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 216/416 (51%), Gaps = 49/416 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
QE+ LK F F+ Q +AI L D F+ MPTG SL + S
Sbjct: 633 QEVRKVLKERFHLRGFRPN-QLEAI-DATLAGKDTFILMPTGGGKSLCYQLPS------- 683
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G ISP+LS +D+ S + L +V+G T E K
Sbjct: 684 -----VVTGGRTTGVTIVISPLLS-----LMEDQVSHL---RKLNIKAFMVNGDTNPEEK 730
Query: 153 A-ILEEL-RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ I+ +L +++LY+TPE + +++ L+ L N+LA +V+DEAHCVS+WGH
Sbjct: 731 SWIMSQLSNAAGEGMEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGH 790
Query: 210 DFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LGE+R +F G +P++ALTATA +VK D++ LK +VF S R NL
Sbjct: 791 DFRPDYKELGEVRARFPG--VPVMALTATATENVKVDVMHNLKITD-CEVFLQSFNRPNL 847
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V + A + E I N CGIIYC +R+ +A+ L++K
Sbjct: 848 TYEVRSKGKNDEVLASMAETITSSY-----QNQCGIIYCLSRKTCDKVAEDLQKKYHLKA 902
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +S Q + G +++I ATI+FGMGID+ +VRFV+H +P S+ YYQE
Sbjct: 903 LAYHAGMSAKVKSEAQRKWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQE 962
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL-SMLEYCE 432
+GRAGRDG +S C +Y +L+ +I D Q + + K L ++++YCE
Sbjct: 963 TGRAGRDGKRSGCYLYFGYKDTATLKRMI--DAGDGNGQQKARQKQMLRNVVQYCE 1016
>gi|300721460|ref|YP_003710735.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
gi|297627952|emb|CBJ88501.1| ATP-dependent DNA helicase [Xenorhabdus nematophila ATCC 19061]
Length = 608
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 219/414 (52%), Gaps = 53/414 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ + +L D V MPTG G + + + G +
Sbjct: 17 LRKTFGYQQFRPGQQQ--VIDAVLDGLDCLVVMPTGG----GKSLCYQIPALVKDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + E + S Q++ + I++ R
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRANGVEAECLNSTQSREQQFDIIQRCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLY+ PER VT++F L+ L + + + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGSIKLLYIAPERLVTDNF---LEQLHDWRPVV-LAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LR+ N +P+IALTATA+ + +QDI+ +L+ ++P + S+F R N+ Y ++
Sbjct: 167 QLRRRFPN-LPVIALTATADNTTRQDIVRLLELHEP--IIHLSSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ Y + + + K+ GIIYC +R + A+ L+++ + +
Sbjct: 219 -EKYKPLDQLWSFVRAQQGKS---GIIYCNSRTKVEETAERLQKRGLSVAPYHAGLENDQ 274
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+ VQ++F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 275 RAWVQDAFQRDDLQIVVATVAFGMGINKPNVRFVVHFNIPRNIESYYQETGRAGRDGLPA 334
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L ++ + +++ +E N + + LV+L +
Sbjct: 335 EAVLFYDPADMVWLRRCLEEKPAGEQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|126179385|ref|YP_001047350.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862179|gb|ABN57368.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
Length = 605
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 168/298 (56%), Gaps = 32/298 (10%)
Query: 145 GQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
G+ K + ILE RI++LYV+PERAV F L+ + I +DEAHC+
Sbjct: 93 GEQKIVERVILEG------RIRILYVSPERAVQPFF----LSLIAKADVRLIAIDEAHCI 142
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
S WGH+FRP YRRL L++ ++P+IALTATA P+V+ DI L + P + F S
Sbjct: 143 SMWGHNFRPEYRRLRVLKERF-PTVPVIALTATAIPAVQNDIAVELALSNPAR-FVGSFN 200
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
R NL Y V+ + F + N+ GIIYC +++ T +LA L+ K
Sbjct: 201 RKNLTYRVV---------PKARYFPRLVAYLNEHKNDAGIIYCFSQKATVELAKKLQDKG 251
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ R+ QE+F RG++ +I AT++FGMGID+ +VRFV+H +P I +Y
Sbjct: 252 FSALPYHAGLPDAVRAEHQEAFSRGDVAIICATVAFGMGIDKPDVRFVIHTDLPKDIESY 311
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YQE+GRAGRDG C +Y+S ++ Y+I+ + + Q ++ ++ +ML+YCE
Sbjct: 312 YQETGRAGRDGEPGDCILYYSRGDYGTIRYIIEKEGADA-TQKDVAYRKVGAMLDYCE 368
>gi|365122666|ref|ZP_09339566.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363642172|gb|EHL81539.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 726
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 202/382 (52%), Gaps = 55/382 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK FGFD+FK ++AI LL D FV MPTG +S P
Sbjct: 7 LIEELKKNFGFDTFKG--NQEAIIRNLLDGKDTFVLMPTGG---------GKSLCYQLPS 55
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+L+G ISP+++ + V + + + + + NKA +
Sbjct: 56 --LLLDGTAI----VISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKAAI 101
Query: 156 EELR--LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
++++ ++ R KLLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 102 DQVKDDIMAGRTKLLYVAPESLTKEENIEFLKQV----KISFYAVDEAHCISEWGHDFRP 157
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV- 272
YRR+ + G S P+IALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 158 EYRRIRPIINEIG-SHPLIALTATATPKVQHDIQKNLGMIDA-EVFKSSFNRPNLYYEVR 215
Query: 273 -IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-------- 323
++ +D ++K +++ GIIYC +R+ +LA+ L+
Sbjct: 216 PKTQNIDRDIIKYIK----------SQSGKSGIIYCLSRKKVEELAETLKVNGINALPYH 265
Query: 324 --VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
++ R++ Q++F+ +++VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGMDSATRTQNQDAFLLEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C ++ + LE
Sbjct: 326 GRDGGEGQCITFYINKDLQKLE 347
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 216/417 (51%), Gaps = 50/417 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+++ + L FG F+ Q +AI + L D FV MPTG + + A
Sbjct: 681 KDVKSALLHRFGLSGFRLN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA------- 731
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G + ISP+LS +D+ V +L+ +++G E+K+
Sbjct: 732 ----VVNSGTTKGVTVVISPLLS-----LMEDQ---VAHLKELHIQAFLLNGDVSKEHKS 779
Query: 154 ILEELRLVKPR----IKLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEW 207
++ L P I+LLYVTPE V ++ L L HL KLA IV+DEAHCVS+W
Sbjct: 780 LIYSA-LANPNVEKLIQLLYVTPE-MVNKNGALLGALSHLHSRKKLARIVIDEAHCVSQW 837
Query: 208 GHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y+ LG R +F G IP++ALTATA +VK D+I L +VF S R
Sbjct: 838 GHDFRPDYKELGNTRAKFPG--IPLMALTATATENVKIDVIHNLGMRN-AEVFVQSFNRP 894
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL Y+V K +V E I + + ++ + GIIYC +R+ +A LR K
Sbjct: 895 NLTYEV----RPKPKNTNVIESIAETI-NESYSGQAGIIYCLSRQSCEKVAAQLRDKYKI 949
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ ER +Q + G+ NVI ATI+FGMGID+ +VRFV+H +P S+ YY
Sbjct: 950 KAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGIDKADVRFVIHHTIPKSLEGYY 1009
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
QE+GRAGRDG +S C +Y+ L ++I + EQ + + + ++++CE
Sbjct: 1010 QETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGS-FEQKKRQRQMLRHVVQFCE 1065
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/408 (34%), Positives = 212/408 (51%), Gaps = 51/408 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+DSF+ Q++ I L D+ V MPTG G + + + G
Sbjct: 7 LENALKHHFGYDSFRSP-QREIIVEAL-ENRDLLVIMPTGG----GKSLCFQLPALMKEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ D+ + + + + +K +
Sbjct: 61 LTVV-----------VSPLIA-----LMQDQVDGLRKNG----IPATFLNSSVSPHKVRM 100
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E ++ ++KLLYV PER ++E F LL + ++ +DEAHCVSEWGHDFRP Y
Sbjct: 101 REQAILAGKVKLLYVAPERLLSERFLPLLDLVHHQIGISAFAIDEAHCVSEWGHDFRPEY 160
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ LRQ N +PI ALTATA V+ DII L +P V S R NL+Y+V
Sbjct: 161 RQMISLRQRYPN-VPIWALTATATERVRLDIIKQLGLKQP-NVHIASFNRQNLYYEVRPK 218
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
K+SY + I+ DN+ + GIIYC TR+ +LA L+ ++
Sbjct: 219 K--KNSYVELLGLIQ-----DNEGS--GIIYCLTRKKVEELAFKLQHDKISALPYHAGLS 269
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ERS Q F+R + +I ATI+FGMGI++ +VRFVVH+ + ++ +YYQESGRAGRDG
Sbjct: 270 DVERSENQTKFIRDDARIIVATIAFGMGINKPDVRFVVHYDISRNLESYYQESGRAGRDG 329
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL-SMLEYCE 432
S C ++ S K++E++I ++ EQ ++ K+ L M++Y E
Sbjct: 330 ESSRCMLFLSYSDVKTIEWLIDQKSN---EQEQMIAKHQLRQMIDYAE 374
>gi|336406152|ref|ZP_08586813.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|423216120|ref|ZP_17202645.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295085102|emb|CBK66625.1| ATP-dependent DNA helicase, RecQ-like [Bacteroides xylanisolvens
XB1A]
gi|335935401|gb|EGM97353.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|392690971|gb|EIY84222.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 602
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/404 (32%), Positives = 205/404 (50%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D+F+ LQ++ IRHIL D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDNFR-PLQEEIIRHIL-NKQDALVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D +++ L S +TEN +
Sbjct: 59 -----------VSPLIS----LMKDQVEALLANGIAAGALN---SSNDETENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ R+KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -IEGRLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF IPI+ALTATA+ ++DI+ L N P + F +S R N+ V
Sbjct: 154 VLHQQFP--QIPIVALTATADKITREDIVRQLHLNHP-RTFISSFDRPNISLTVKRGFQA 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI + GIIYC +R T +A L+++ ++
Sbjct: 211 KEKNKAILEFIHR------HGEESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQH 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q + + M +Y E
Sbjct: 325 NTVLFYSLG-----DLILLTKFASESNQQNINLEKLQRMQQYAE 363
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/406 (33%), Positives = 207/406 (50%), Gaps = 55/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG F+ ++ I + L D FV MPTG G + + + PG +
Sbjct: 292 FGLRHFR--PHQEEIINASLTQQDCFVLMPTGG----GKSLCYQLPAVLMPGVTIV---- 341
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSD-LYQLEL----IVSGQTKTENKAILEEL 158
ISP+ ++++ + D L L++ + S K + I ++L
Sbjct: 342 -------ISPL------------RALISDQVDKLNALDIPSAHLCSDVKKADVDVIFQKL 382
Query: 159 RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+ +P +KLLY+TPE+ + + +++ L NKLA V+DE HC+S+WGHDFRP Y++
Sbjct: 383 HVREPILKLLYLTPEKMSASGKVTDMIKSLYARNKLARFVIDEVHCLSQWGHDFRPDYKQ 442
Query: 218 LGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
L LR Q+ +PII LTATA V+ D+ ++L P K F S R N+ Y VI +
Sbjct: 443 LSNLRKQYP--EVPIICLTATATKQVQGDVTNILGLKNP-KTFIRSFNRPNIKYRVIPKN 499
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNK 326
+K V E I K L K GIIYC R LA+ L + ++
Sbjct: 500 GIK-----VVEEITK-LIKQRFYRKSGIIYCLCRADCEKLAEDLCKLGIKAKAYHAGMSD 553
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R + Q +M+ + +VI ATI+FGMGID+ +VRFV+H MP S+ A+YQESGRAGRDG
Sbjct: 554 SIREKQQREWMQDQFHVIVATIAFGMGIDKPDVRFVIHNSMPKSVEAFYQESGRAGRDGE 613
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
SY +++S L+ +++ D + L ++N M+ +CE
Sbjct: 614 PSYSYLFYSYADAGRLKRLMQMDRGVNKNALHGHYENLYQMVSFCE 659
>gi|255690250|ref|ZP_05413925.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|260624270|gb|EEX47141.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
Length = 601
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 211/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL + D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHILDK-QDALVLMPTGG----GKSICYQLPALLSEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + +++ + S +TEN +
Sbjct: 59 -----------VSPLISLM-------KDQVEALQANGIAAGALNSSNDETENANLRRSC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
V ++KLLY++PE+ + E +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -VAGKLKLLYISPEKLLAEK-----DYLLRDMNISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +PIIALTATA+ ++DII L +P + F +S R N+ V
Sbjct: 154 VLHQQFP--QVPIIALTATADKITREDIIRQLHLIRP-RTFISSFDRPNISLTVKRGFQT 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + EFI++ GK++ GIIYC +R T +A L ++ ++ +
Sbjct: 211 KEKNKAIIEFIQRH-GKES-----GIIYCMSRNKTETVAQTLLKQGIRCGVYHAGLSAQQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDETQNDFINDRIQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +++ Q ++ + M +Y E
Sbjct: 325 DTVLFYSLG-----DLILLTKFASESSQQKINLEKLQRMQQYAE 363
>gi|423278476|ref|ZP_17257390.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|404586486|gb|EKA91059.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 601
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 211/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IR+ L+ D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRN-LMSKRDALVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S +D S+ L S ++EN +
Sbjct: 59 -----------ISPLIS----LMKDQVESLCANGIPAGALN---SSNDESENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R ++ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGKLKLLYISPEKLLSEA-----DYLLRDMTISLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +IP+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRTQFP--NIPMIALTATADKITREDIVRQLQLKQP-EIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIVDFIARHRGES------GIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDEAQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|284040794|ref|YP_003390724.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283820087|gb|ADB41925.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 736
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 206/390 (52%), Gaps = 51/390 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L +LK +FG+ F+ E ++AI + +L + FV MPTGA G + + + G
Sbjct: 12 LRERLKEIFGYSQFRGE--QEAIIYSILAGRNTFVIMPTGA----GKSLCYQLPAIVSEG 65
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ K + + + + S +K E +
Sbjct: 66 TAVV-----------ISPLIALM-------KNQVDQLNAFGINAQFLNSTLSKAEMNKVK 107
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++ + +KLLY+ PE E L L + N ++++ +DEAHC+SEWGHDFRP Y
Sbjct: 108 KDT--LNGTLKLLYIAPESLTKEEN---LDFLKKAN-ISFVAIDEAHCISEWGHDFRPEY 161
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R++ + GN +P+IALTATA P V+QDI L+ ++KTS R NL+Y++
Sbjct: 162 RKIRGIVDNIGN-LPVIALTATATPKVQQDIQKNLQMEDA-NLYKTSFNRKNLYYEI--- 216
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
D+ + ++I++ GK GIIYC +R+ ++A+ LR ++
Sbjct: 217 RPKVDAKKQLIKYIKQNKGK------SGIIYCLSRKTVEEIAELLRVNDVKALPYHAGLD 270
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R Q++F+ +++VI ATI+FGMGID+ +VRFV+H+ P S+ YYQE+GRAGRDG
Sbjct: 271 PVTRMNNQDAFLNEDVDVICATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDG 330
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
L+ C +++S LE K T+R+
Sbjct: 331 LEGNCLMFYSFDDIVKLEKFNKDKPVTERD 360
>gi|410095931|ref|ZP_11290923.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409227962|gb|EKN20857.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 727
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 205/401 (51%), Gaps = 69/401 (17%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT LK FGFD+FK +KAI +L +D FV MPTG + S++ + +
Sbjct: 7 LTEHLKTHFGFDTFKG--NQKAIIENVLAGNDTFVLMPTGGGKSLCYQLPSIMMEGTAIV 64
Query: 92 IPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
I P + N N +G I SS +K++I ++D I++G+
Sbjct: 65 ISPLIALMKNQVDAMRNFSEEDGVAHFINSSL------NKSAIDQVKAD------IMAGR 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE E L+++ +++ VDEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLTKEENVEFLRNV----NISFYAVDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
WGHDFRP YRR+ + G P+IALTATA P V+ DI L VFK+S RS
Sbjct: 151 WGHDFRPEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRS 208
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANN--CGIIYCRTREHTTDLADALRRK- 323
NL+Y+V D E +++ + K KAN GI+YC +R+ + AD L+
Sbjct: 209 NLYYEVRPKD----------ENVDREIIKYIKANEGKSGIVYCLSRKKVEEFADILKANG 258
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ Y
Sbjct: 259 IKALAYHAGMDSGQRSANQDAFLLEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGY 318
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 319 YQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 359
>gi|270293488|ref|ZP_06199690.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270274955|gb|EFA20815.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 603
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 209/403 (51%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ+ IRH++ R D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEDIIRHLMDR-KDALVLMPTGG----GKSICYQLPALLSEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T ++ + S +TEN ++
Sbjct: 59 -----------VSPLISLM-------KDQVETLCANGIAAGALNSNNDETENASLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +YLL+ + ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLAEA-NYLLRDI----HISLFAIDEAHCISQWGHDFRPEYTQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L Q +PIIALTATA+ ++DII L N+P ++F +S R NL V K
Sbjct: 154 ILHQLFPQ-VPIIALTATADKITREDIIKQLHLNQP-RIFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI + G+ GIIYC +R T +A L++ ++ R
Sbjct: 212 EKSKAILDFIARHPGES------GIIYCMSRSKTESVAQMLQKHGIRSAVYHAGLSPARR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + + ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 266 DEAQDDFINDRVQAVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATDSGQQSINLEKLQRMQQYAE 363
>gi|424664440|ref|ZP_18101476.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404576022|gb|EKA80763.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
Length = 601
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IR+ L+ D V MPTG G + + + G +
Sbjct: 5 LKIYFGYDSFR-PLQEEIIRN-LMSKRDALVLMPTGG----GKSICYQLPALLMEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S +D S+ L S ++EN +
Sbjct: 59 -----------ISPLIS----LMKDQVESLCANGIPAGALN---SSNDESENANLRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ ++E+ +L+R ++ VDEAHC+S+WGHDFRP Y R+G
Sbjct: 100 -ISGKLKLLYISPEKLLSEA-----DYLLRDMTISLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +IP+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 154 FLRTQFP--NIPMIALTATADKITREDIVRQLQLKQP-EIFISSFDRPNLSLSVKRGYQP 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L++ ++ +
Sbjct: 211 KEKSKAIVDFIARHRGES------GIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQ 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q++F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDEAQDNFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 DTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 363
>gi|392963657|ref|ZP_10329081.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387847620|emb|CCH51120.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 715
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 198/372 (53%), Gaps = 51/372 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E T LK +G+D F+ +Q+ +R IL R D V MPTG G V + +
Sbjct: 15 REPTDYLKRYYGYDRFR-PMQEDIVRSIL-RGRDTLVLMPTGG----GKSVCFQIPALMM 68
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ K + + S Q+ E +A
Sbjct: 69 PGICVV-----------VSPLIALM-------KDQVEALHMNGIPAAFYNSTQSGKEQRA 110
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I ++ VK +IKLLYV+PE+ +TESF L+ + ++ +DEAHC+S WGHDFRP
Sbjct: 111 IEDDC--VKGKIKLLYVSPEKMLTESFFVFLKRI----NISLFAIDEAHCISSWGHDFRP 164
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y +L L++ ++P +ALTATA+ + DI L N P VF S R NL V+
Sbjct: 165 EYTQLHVLKEHF-PTVPTVALTATADKLTRNDIAQRLGMNDP-AVFIASFNRPNLSLKVL 222
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ + + +++ K + GIIYC +R+ T LA L+ K
Sbjct: 223 PG---TNRLPQIIKLLQQ------KPDTSGIIYCLSRKSTESLAAKLQEKGFKAAFYHAK 273
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R++ QE+F+R ++ ++ ATI+FGMGID+ NVR+V+H+ +P +I ++YQE GRAGR
Sbjct: 274 MDPEDRAKTQEAFLRDDVRIMCATIAFGMGIDKSNVRWVIHYNLPKNIESFYQEIGRAGR 333
Query: 384 DGLQSYCRIYHS 395
DG ++ +++S
Sbjct: 334 DGAEAQTVLFYS 345
>gi|126661004|ref|ZP_01732090.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
gi|126617703|gb|EAZ88486.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
Length = 710
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/392 (34%), Positives = 197/392 (50%), Gaps = 47/392 (11%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ +K I + L D+ + MPTG G + + + G
Sbjct: 8 LENALKYFFGYDQFRS--GQKQIINEALNDKDLLIIMPTGG----GKSLCFQLPALLKSG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+++ + + +L D+ S L + EL ++ AIL
Sbjct: 62 VCVVVSPLIALMQDQVDALL--------DNGIGATFLNSTLNREEL------QSRENAIL 107
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
K +IKL+YV PER + ++F L L + L+ +DEAHCVS WGHDFRP Y
Sbjct: 108 ------KGKIKLVYVAPERLLNDNFLNFLDFLKQKVGLSAFAIDEAHCVSAWGHDFRPEY 161
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+L +LR F +P+ ALTATA V+ DII L P V S R NL+Y+V
Sbjct: 162 RQLKQLR-FRYPKVPMFALTATATKRVRADIIEQLGLQNP-TVHVASFDRPNLYYEV--Q 217
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLA--------DALRRKVNKH 327
+ SY + +I G GIIYC +R++ +A DAL +
Sbjct: 218 QKSRRSYTQLLNYIRNQEGS-------GIIYCLSRKNVETIALRLQQDGIDALPYHAGMY 270
Query: 328 --ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
ER+ Q F+R ++ +I ATI+FGMGI++ +VRFVVH+ +P ++ +YYQESGRAGRDG
Sbjct: 271 DDERATNQTRFIRDDVRIIVATIAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRDG 330
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
+ C ++ S K LEY+I K +++
Sbjct: 331 EPANCALFFSFGDLKRLEYLIDQKIDEKEQRV 362
>gi|354721299|ref|ZP_09035514.1| ATP-dependent DNA helicase RecQ [Enterobacter mori LMG 25706]
Length = 609
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQEVMAGCR--TGQIRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N PY + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDPY--IQVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 376
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 377 AQTCRRLVLLNY 388
>gi|218130244|ref|ZP_03459048.1| hypothetical protein BACEGG_01832 [Bacteroides eggerthii DSM 20697]
gi|217987528|gb|EEC53856.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 604
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/404 (32%), Positives = 210/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IRHIL +D V MPTG G + + + G +
Sbjct: 5 LKTYFGYDSFR-PLQEEIIRHIL-GGNDALVLMPTGG----GKSICYQLPALLREGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D ++ L S +TEN A+
Sbjct: 59 -----------VSPLIS----LMKDQVEALCANGISAGALN---SSNDETENAALRRAC- 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 100 -MEGKLKLLYISPEKLLAEA-----NYLLRDMHVSLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 EL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L +QF +P+IALTATA+ ++DII L N P ++F +S R NL V
Sbjct: 154 ILHQQFP--QVPVIALTATADKITREDIIKQLHLNHP-RIFISSFDRPNLSLTVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ + +FI + G+ GIIYC +R T +A L+++ ++
Sbjct: 211 KEKSKAIIDFIARHPGES------GIIYCMSRSKTESVAQMLQKQGIRAAVYHAGLSPTR 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDG+ S
Sbjct: 265 RDEAQDDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T Q + + M +Y E
Sbjct: 325 DTLLFYSLS-----DLILLTKFATDSGQQSINIEKLQRMQQYAE 363
>gi|427388684|ref|ZP_18884382.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425724657|gb|EKU87532.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 611
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 211/413 (51%), Gaps = 54/413 (13%)
Query: 30 KVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
K S ++ LK FG+D+F+ LQ+ IR LL D V MPTG G + +
Sbjct: 4 KTSSLKMIQTLKRYFGYDTFR-PLQEDIIR-TLLDGRDALVLMPTGG----GKSICYQLP 57
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+ G + +SP++S +D ++ L S +T
Sbjct: 58 ALLCEGTAVV-----------VSPLIS----LMKDQVEALCANGIAAGALN---SSNDET 99
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
EN A+ ++ ++KLLY++PE+ + E+ +L+R ++ +DEAHC+S+WGH
Sbjct: 100 ENAALRRSC--MEGKLKLLYISPEKLIAEA-----NYLLRDMHISLFAIDEAHCISQWGH 152
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y ++G + + N IPIIALTATA+ + DI+ L N+P K+F +S R NL
Sbjct: 153 DFRPEYAQMGFMHEMFPN-IPIIALTATADKITRVDIVRQLHLNQP-KIFISSFDRPNLS 210
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
V K+ + +FI + G+ GIIYC +R T +A L+++
Sbjct: 211 LTVKRGYQQKEKSKAILDFIARHPGES------GIIYCMSRSKTETVAQMLQKQGLRVAV 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ +R Q F+ + ++ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE G
Sbjct: 265 YHAGLSSAQRDEAQNDFINDRVQIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDGL S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 325 RAGRDGLPSDTMLFYS-----LADLILLTKFATESGQQGINLEKLQRMQQYAE 372
>gi|298711049|emb|CBJ26444.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 807
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 161/307 (52%), Gaps = 42/307 (13%)
Query: 163 PRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P+IKLLYVTPE+ A L L + ++ + VDEAHCVS WGHDFRP Y LG
Sbjct: 153 PKIKLLYVTPEKLAKGGELTTALAGLAKRGLISLLAVDEAHCVSTWGHDFRPAYLELGAF 212
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD- 280
R+ +P +ALTATA V DI L F + +V KTS R+ + V + D +
Sbjct: 213 RKKHLKGVPCLALTATATEEVCADIKKQLGFREGSRVLKTSFNRAEIHLSVHYKDAMDGG 272
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR------------------ 322
+ H+ F+ + G+ GI+YC R+ +LA AL R
Sbjct: 273 ALEHLVGFLRERRGQS------GIVYCHKRDTAEELAKALNRALREESLLDGGKAFLAMP 326
Query: 323 ---KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
K++ H+R+ Q FM GE++VI +++FGMG+D+ +VRFVVHW +P S+ YQE G
Sbjct: 327 YHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELG 386
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIK-----------TDTSTK-REQLELK-FKNYLS 426
RAGRDG ++ +YHS + L ++ + T+ K R + LK K S
Sbjct: 387 RAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRRRRASLKAVKAVDS 446
Query: 427 MLEYCEQ 433
++ YCE+
Sbjct: 447 VVAYCEK 453
>gi|367019938|ref|XP_003659254.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
gi|347006521|gb|AEO54009.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
Length = 1843
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 116/287 (40%), Positives = 162/287 (56%), Gaps = 29/287 (10%)
Query: 165 IKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ 223
I+LLYVTPE + +F +Q L R NKLA IV+DEAHCVS WGHDFRP Y+ LGE R+
Sbjct: 1013 IQLLYVTPEMLTNSPAFRNGVQLLYRKNKLARIVIDEAHCVSHWGHDFRPDYKALGEFRR 1072
Query: 224 -FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSY 282
F G +P++ALTATA +V DI L +VF S R N++Y VI+
Sbjct: 1073 GFPG--VPVMALTATATKNVMADIKHNLDMEN-CEVFTQSFNRPNIYYQVIYKQ------ 1123
Query: 283 AHVKEFIEKCLGK---DNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHE 328
FI + +G+ + CGI+Y +R+ A AL K ++
Sbjct: 1124 ---SRFI-RGMGELINERFPGQCGIVYTLSRKSAEGTAQALVSKHGIKARYYHAQMDPES 1179
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
+ VQE + GEI+V+ ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDG S
Sbjct: 1180 KLEVQEQWQAGEIHVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRAGRDGKPS 1239
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
C +Y + H +L +I D +++ E + + M+ YCE +
Sbjct: 1240 ECILYFAYHDIPALRRMINEDKDKDKDEKERQHQMLNRMVNYCETSH 1286
>gi|334126137|ref|ZP_08500116.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
gi|333385797|gb|EGK57023.1| ATP-dependent helicase RecQ [Enterobacter hormaechei ATCC 49162]
Length = 630
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 25 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 82
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 83 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 120
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 121 TREQQQEVMAGCR--TGQIRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 174
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N PY + S+F R
Sbjct: 175 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDPY--IQVSSFDR 231
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 232 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 277
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 278 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 337
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 338 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 397
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 398 AQTCRRLVLLNY 409
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 204/414 (49%), Gaps = 52/414 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
QE+ + FG +F+ Q +AI LL D F+ MPTG G + + +
Sbjct: 515 QEMLKIFRQRFGLYTFRPN-QLQAINATLL-GFDCFILMPTGG----GKSLCYQLPALLN 568
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI---VSGQ-TKT 149
G + ISP+ K+ I+ L L++ +SG T
Sbjct: 569 VGLTIV-----------ISPL-----------KSLILDQVQKLISLDIPAAHLSGSITDN 606
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ +AI EL +P +K+LYVTPE+ + ++ F L L L V+DEAHCVS+WG
Sbjct: 607 QAEAIYRELSKKEPALKILYVTPEKISASQKFCNTLTILYERELLTRFVIDEAHCVSQWG 666
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y++L LR +P +ALTATA P V+ DI+ L P K F +S R NL
Sbjct: 667 HDFRPDYKKLKCLRN-NYPKVPTMALTATATPRVRTDILHQLGMTNP-KWFMSSFNRPNL 724
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y +I K E + + K N CGI+YC +R+ D A +++
Sbjct: 725 RYSIIS----KKGKNCSDEIVAMIMTK--FKNTCGIVYCLSRKDCEDYAAHMKKNGIKVL 778
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +RS Q ++ E++VI ATI+FGMGID+ NVRFV+H +P SI +YYQES
Sbjct: 779 SYHAGLSDTQRSNCQGKWISDEVHVICATIAFGMGIDKPNVRFVIHAALPKSIESYYQES 838
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG + C +++ + + + D + + N M+ +CE
Sbjct: 839 GRAGRDGEIADCILFYHYADMHRIRKMFEQDNPNP-QVISTHMDNLFKMVAFCE 891
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 217/420 (51%), Gaps = 56/420 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
+++ + LK F F+ Q +AI L D FV MPTG SL + S
Sbjct: 339 KDVKSVLKDRFHLRGFRLN-QLEAI-DATLSGKDTFVLMPTGGGKSLCYQLPS------- 389
Query: 93 PPGADFILNGNVRSRNGWISPILS-----SFYLRFRDDKTSIVTGRSDLYQLELIVSGQT 147
+ +G R ISP+LS ++LR + K ++ G + + + I+S +
Sbjct: 390 -----IVKSGTTRGVTIVISPLLSLMQDQVYHLRQLEIKAYLLNGETQKTERQWIMSTLS 444
Query: 148 KTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCV 204
++ + I+LLY+TPE + L ++L R N +LA IV+DEAHCV
Sbjct: 445 SSDAEG----------HIELLYITPE--MVNKNQTLTRNLERLNNRHRLARIVIDEAHCV 492
Query: 205 SEWGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
S+WGHDFRP Y+ LG LR Q G +P++ALTATA +VK D+I LK +F S
Sbjct: 493 SQWGHDFRPDYKELGGLRAQLPG--VPMMALTATATENVKVDVIHNLKMEG-CDIFTQSF 549
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R NL Y+V + A + + I K + N GI+YC +R+ +A +LR
Sbjct: 550 NRPNLTYEVRQKKKGNELLASIADTI-----KSSYHNKSGIVYCLSRDTCQKVAKSLRDD 604
Query: 324 -----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ER+ VQ+ + G +VI ATI+FGMGID+ +VRFV+H +P S+
Sbjct: 605 YRIKAEHYHAGMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLE 664
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG +S C +Y+ ++ +I + +K +Q + + +++++CE
Sbjct: 665 GYYQETGRAGRDGKRSGCYMYYCYRDSMTITRMIDSSDGSK-QQKNRQRQMLRNVVQFCE 723
>gi|387771794|ref|ZP_10127951.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
gi|386908179|gb|EIJ72877.1| ATP-dependent DNA helicase RecQ [Haemophilus parahaemolyticus
HK385]
Length = 601
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 162/261 (62%), Gaps = 27/261 (10%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT E + I E + + ++KLLY++PE+ +T+ F++ + H K+++I VDEAHC
Sbjct: 91 SSQTLEEQRVI--EQKALSGQLKLLYLSPEKVMTQGFYHFISHC----KISFIAVDEAHC 144
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
VS+WGHDFRP Y LG LR T +IP++ALTATA+P+ + DI+ L+ N+P+ + S
Sbjct: 145 VSQWGHDFRPEYTLLGNLRN-TFPNIPLMALTATADPTTRADILLHLRLNEPH-TYLGSF 202
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y V ++ + +++ + G+ K+ GI+YC +R+ ++ + L +
Sbjct: 203 DRPNIRYTV------QEKFKPMEQLAKFIAGQKGKS---GIVYCNSRKKVEEITEKLSAR 253
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ +R VQ +F R I V+ AT++FGMGI++ NVRFVVH+ +P SI +
Sbjct: 254 NISVMGYHAGMSVQQRETVQNAFQRDNIQVVVATVAFGMGINKSNVRFVVHFDLPRSIES 313
Query: 374 YYQESGRAGRDGLQSYCRIYH 394
YYQE+GRAGRD L S +++
Sbjct: 314 YYQETGRAGRDDLPSQAVMFY 334
>gi|308051389|ref|YP_003914955.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
gi|307633579|gb|ADN77881.1| ATP-dependent DNA helicase RecQ [Ferrimonas balearica DSM 9799]
Length = 608
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 196/369 (53%), Gaps = 54/369 (14%)
Query: 32 SEQELTAK-LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++Q+L L+ +FGF +F+ Q + + L D V MPTG G + +
Sbjct: 10 TDQQLALNTLQQVFGFRAFRPG-QDEVVAQTLA-GRDCLVIMPTGG----GKSLCYQLPA 63
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ PG + ISP++S + + S V + + E
Sbjct: 64 LVLPGLTVV-----------ISPLISLMKDQVDALRESGVAA----------AALNSSLE 102
Query: 151 NKAILEELRLV-KPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
++E + + + IKLLY++PER ++ L H L+ + VDEAHC+S+WGH
Sbjct: 103 RHEVVELMGAIHRGEIKLLYISPERLLSADIQERLAHW----PLSLVAVDEAHCISQWGH 158
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y +LG L+Q +PI+ALTATA+ + +QDI L +P+ ++S R N+
Sbjct: 159 DFRPEYAQLGWLKQRF-PQVPIMALTATADGATRQDICQRLNLQQPFH-HQSSFDRPNIR 216
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y V + L+ + E++++ G N GI+YC +R ++A+ LR+K
Sbjct: 217 YTVA--EKLR-PLEQLTEYLKQQKG------NAGIVYCGSRRRVDEVAEKLRQKGFVAAG 267
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER+ VQE F+R ++++ AT++FGMGI++ NVRFVVHW +P SI YYQE+G
Sbjct: 268 YHAGMASDERAAVQEGFLRDRVDIVVATVAFGMGINKSNVRFVVHWDLPKSIEGYYQETG 327
Query: 380 RAGRDGLQS 388
RAGRDGL+S
Sbjct: 328 RAGRDGLES 336
>gi|396484512|ref|XP_003841962.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
gi|312218537|emb|CBX98483.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 148/414 (35%), Positives = 208/414 (50%), Gaps = 46/414 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L L FG F+ Q +AI L H FV MPTG SL + S
Sbjct: 825 QDLRNALVRRFGLRGFR-PGQLEAINTTLGGEH-CFVLMPTGGGKSLCYQLPS------- 875
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
I +G R +SP+LS +D+ + R + Q LI T +
Sbjct: 876 -----VITSGKTRGVTIVVSPLLS-----LMEDQVAACEQRFGM-QAFLINGESTAAQKN 924
Query: 153 AILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I++ L+ P+ I++LYVTPE + + LQ L LA IV+DEAHCVS+WGH
Sbjct: 925 MIMDALKERDPQKFIQILYVTPEMLSKNQRMVGTLQQLHSRGHLARIVIDEAHCVSQWGH 984
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG++ RQF G +P+IALTATA V+ D+++ L + F S R NL
Sbjct: 985 DFRPDYKALGDVVRQFPG--VPVIALTATATSLVRTDVVANLGIQG-CRQFSQSFNRPNL 1041
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL-------- 320
Y+V L S V E L KD + GIIYC +R+ D+A L
Sbjct: 1042 SYEV-----LPKSKGVVNSIAE--LIKDRYSKKSGIIYCLSRKSCEDVAKKLSDLGLKAF 1094
Query: 321 --RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ ERS VQ + E +VI ATI+FGMGID+ +VR+V+H +P S+ YYQE+
Sbjct: 1095 HYHAGMESAERSAVQRKWQSNEYHVIVATIAFGMGIDKADVRYVIHHTLPKSLEGYYQET 1154
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
GRAGRDG +S C +Y+ ++ +I + EQ + ++++YCE
Sbjct: 1155 GRAGRDGKRSECYLYYQYTDCRTYRKMIDEGEGS-FEQKQRLHSMLRTVIQYCE 1207
>gi|46107486|ref|XP_380802.1| hypothetical protein FG00626.1 [Gibberella zeae PH-1]
Length = 482
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 170/309 (55%), Gaps = 32/309 (10%)
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I +L PR++LLYVTPE + F LQ + + +LA + +DEAHC+SEWGHDFR
Sbjct: 107 IERDLESGHPRLRLLYVTPELCSSPRFRERLQLVYKQKELARVAIDEAHCISEWGHDFRK 166
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNK-PYKV--FKTSTFRSNLFY 270
+ RL R T +PI+ LTATA P V+QD++S+LK +K P K F + R NL
Sbjct: 167 DFSRLSWFRD-TFPDVPIMCLTATANPQVRQDVLSILKLDKNPEKTKKFLMNPQRKNLHL 225
Query: 271 DVIF-----DDLLKDSYAHVKEFIEKCLGKDNKA----------NNCGIIYCRTREHTTD 315
++ + D+ L D +K + G + +A N GIIY +R+
Sbjct: 226 EIRYTKDEEDNRLNDFLRWIKSVYVRREGGERRAELDQMNERVDNVPGIIYTISRDECES 285
Query: 316 LADALR------RKVNKHERSRVQESFMRGEIN------VITATISFGMGIDRQNVRFVV 363
LA +LR R + V+E + IN +I AT +FGMGID+ NVRFVV
Sbjct: 286 LAASLRSEGIGARPFHARLPKDVKEETLARWINNEVGYDIIVATTAFGMGIDKDNVRFVV 345
Query: 364 HWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN 423
HW +P S YYQE+GRAGRDG SYC +Y+S + + +I++D+ + Q+ + K+
Sbjct: 346 HWRIPKSFEGYYQEAGRAGRDGNASYCFLYYSREDLERVTRLIRSDSKEETNQI-ARLKS 404
Query: 424 YLSMLEYCE 432
++ +YCE
Sbjct: 405 LQALAQYCE 413
>gi|325660786|ref|ZP_08149414.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472860|gb|EGC76070.1| ATP-dependent DNA helicase RecQ [Lachnospiraceae bacterium
4_1_37FAA]
Length = 617
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 191/369 (51%), Gaps = 56/369 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ E Q+ I H ++ D+F MPTGA G + + + PG +
Sbjct: 11 LKHYFGYDSFR-EGQEFLIEH-MMNGQDVFGIMPTGA----GKSLCYQIPALLMPGITLV 64
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENKAILEE 157
ISP++S D+ + + G + + GQ L
Sbjct: 65 -----------ISPLIS-----LMKDQVAALNQAGVHAAFLNSSLTQGQ-------YLTA 101
Query: 158 LRLVKP-RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
LR K R K++YV PER +TESF R +++ + VDEAHCVS+WG DFRP+Y
Sbjct: 102 LRYAKEGRYKIIYVAPERLLTESF----LGFAREAEISMVSVDEAHCVSQWGQDFRPSYL 157
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
++ E + G + A TATA VK+DII++L P + T R NL + V +
Sbjct: 158 KIAEFFNYLGTRPVLSAFTATATAEVKEDIIALLNLRDP-AMITTGFDRVNLRFCV---E 213
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
+D +A V ++ + G+ CGIIYC TR+ ++ + L ++ +
Sbjct: 214 HPRDKFAAVTAYLREHEGE------CGIIYCLTRKVVEEVCEKLIKEGLEVTRYHSGLGD 267
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
ER R QE F+ ++ AT +FGMGID+ NVRFV+H+ MP ++ +YYQE+GRAGRDG+
Sbjct: 268 EERRRNQEDFIYDRKQIMVATNAFGMGIDKSNVRFVIHYNMPKNMESYYQEAGRAGRDGM 327
Query: 387 QSYCRIYHS 395
S C + +S
Sbjct: 328 SSECILLYS 336
>gi|371777407|ref|ZP_09483729.1| ATP-dependent DNA helicase [Anaerophaga sp. HS1]
Length = 726
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 201/379 (53%), Gaps = 48/379 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK FGFD+FK Q++ I+++ L +D FV MPTG +S P
Sbjct: 6 DLKRYLKKHFGFDTFKGN-QEEIIKNV-LAGNDTFVLMPTGG---------GKSLCYQLP 54
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
IL G ISP+++ ++ ++ + D + S TK+ + +
Sbjct: 55 A--LILEGTAI----VISPLIA----LMKNQVDAMRSFSEDDGIAHFLNSSLTKSAIQKV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
E+ ++ R +LLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 105 KED--VIAGRTRLLYVAPESLTKEENIQFLKQV----KISFYAVDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YRR+ + G + P+IALTATA P V+ DI L +VFK+S R NL+Y+V
Sbjct: 159 YRRIRPIINEIGEA-PVIALTATATPKVQHDIQKNLGMLNA-RVFKSSFNRPNLYYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKV 324
+ +E I+ + KDN + IIYC +R+ +LA+ L +
Sbjct: 215 ----RPKVNATREIIK--ILKDNPGKSA-IIYCLSRKKVEELAETLVVNGIKALAYHAGM 267
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS+ Q+ F+ EI+VI ATI+FGMGID+ +VR V+H+ +P S+ YYQE+GRAGRD
Sbjct: 268 DAATRSKNQDKFLMEEIDVIVATIAFGMGIDKPDVRMVIHYDIPKSLEGYYQETGRAGRD 327
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++S + LE
Sbjct: 328 GGEGKCIAFYSYKDIQKLE 346
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 212/413 (51%), Gaps = 44/413 (10%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ L+ F F+ E Q +AI + L D F+ MPTG +S P
Sbjct: 20 DVKVALRERFRLKGFR-ENQLQAI-NATLAGKDTFILMPTGG---------GKSLCYQLP 68
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ-TKTENKA 153
I G + +SP+LS +D+ + +L +V+G+ T E
Sbjct: 69 S--LITTGKTKGVTVVVSPLLS-----LMEDQVQHLL---ELGIQAFLVNGESTAGEKNQ 118
Query: 154 ILEEL--RLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
I E L R + I+ LYVTPE + ES + + L + +LA IV+DEAHCVS+WGHD
Sbjct: 119 IREALGQRDAQEFIQCLYVTPEMLSKNESMLSIFERLYQRRQLARIVIDEAHCVSQWGHD 178
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y+ LG +RQ +P++ALTATA +VK D+I L + ++F S R NL+Y
Sbjct: 179 FRPDYKLLGNVRQ-RFPEVPVMALTATATDAVKLDVIHNLHID-SCEIFTRSFNRPNLYY 236
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K+S E I L K+ GIIYC +R++ D+A L ++
Sbjct: 237 EV----RPKESKGKDLESI-ATLIKERHRGQSGIIYCLSRKNCEDMAADLVKQHKVKAAH 291
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ +RS+ Q+ + G +VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+G
Sbjct: 292 YHAGLTSEQRSKAQKQWQSGTYHVIVATIAFGMGIDKADVRFVIHNSIPKSLEGYYQETG 351
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG S C +++ L +I D EQ + + + M+++CE
Sbjct: 352 RAGRDGKHSGCYLFYGYSDAGKLRRMID-DGEGSHEQKDRQHQMLRKMVQFCE 403
>gi|425066310|ref|ZP_18469430.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
gi|404381895|gb|EJZ78360.1| ATP-dependent DNA helicase RecQ [Pasteurella multocida subsp.
gallicida P1059]
Length = 632
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 169/285 (59%), Gaps = 27/285 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT TE + + + +L+ +KLLYV+PE+ +T SF +L+ H K++++ +DEAHC
Sbjct: 110 SSQTFTEQQQV--QNKLMSGTLKLLYVSPEKVMTTSFFHLISHC----KVSFVAIDEAHC 163
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP Y +LG L+ ++ PI+ALTATA+ + +QDI+ L P+ V+ S
Sbjct: 164 ISQWGHDFRPEYTQLGGLKSCFPHA-PIMALTATADHATRQDILRHLNLQSPH-VYIGSF 221
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R N+ Y ++ + + +++ LG+ K+ GIIYC +R +A++LR K
Sbjct: 222 DRPNIRYTLV------EKFKPMEQLCRFVLGQKGKS---GIIYCNSRSKVERIAESLRNK 272
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+R +VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +
Sbjct: 273 GVSAQAYHAGRETAQREQVQRAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIES 332
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
YYQE+GRAGRD L + +++ L ++ + + Q+E
Sbjct: 333 YYQETGRAGRDDLPAEAVLFYEPADYAWLHKILLEKPESPQRQIE 377
>gi|401765702|ref|YP_006580709.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400177236|gb|AFP72085.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 609
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +++LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQEVMAGCR--TGQVRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N PY + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDPY--IQVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 376
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 377 AQTCRRLVLLNY 388
>gi|359299526|ref|ZP_09185365.1| ATP-dependent DNA helicase RecQ [Haemophilus [parainfluenzae] CCUG
13788]
gi|402304439|ref|ZP_10823509.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
gi|400378027|gb|EJP30892.1| ATP-dependent DNA helicase RecQ [Haemophilus sputorum HK 2154]
Length = 601
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 208/391 (53%), Gaps = 53/391 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+ F+ + Q++ I +L D V M TG + V A
Sbjct: 11 LQNVFGYQQFR-QGQQEVIDAVLA-GRDCLVIMTTGGGKSLCYQVPA-----------LC 57
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L G I+ ++S +D ++T + L S QT+ E +A+ E +
Sbjct: 58 LEG--------ITLVISPLISLMKDQVDQLLTNGIEAAYLN---STQTQEEQQAV--EQK 104
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T+ F LV Y K+++I VDEAHCVS+WGHDFRP Y LG
Sbjct: 105 ALSGQLKLLYLSPEKVMTQGFF----RLVSYCKVSFIAVDEAHCVSQWGHDFRPEYTLLG 160
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR+ T +IP++ALTATA+P+ + DI+ L+ N P+ + S R N+ Y V + K
Sbjct: 161 NLRK-TFPNIPLMALTATADPTTRADILHHLRLNDPH-TYLGSFDRPNIRYTV--QEKFK 216
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ +FI GK GI+YC +R+ ++ + L + ++ +R
Sbjct: 217 -PMEQLAKFINAQKGKS------GIVYCNSRKKVEEITEKLSARHISVMGYHAGMSVQQR 269
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ +F R + V+ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L S
Sbjct: 270 ETVQNAFQRDNVQVVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSE 329
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+++ L+ ++ + + EQ ++K
Sbjct: 330 AVMFYDPADYAWLQKILLEEPES--EQRDIK 358
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 208/406 (51%), Gaps = 44/406 (10%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK F F+ Q +AI L D+FV MPTG + + A G +
Sbjct: 407 LKKFFKLKRFR-RNQLEAINGTL-SGRDVFVLMPTGGGKSLCYQLPACIDTDKATGVSIV 464
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+LS D +V R D+ ++L + + + R
Sbjct: 465 -----------ISPLLS----LIEDQVLDLV--RKDVPAVKL-TGDMSANDRRDAFNTAR 506
Query: 160 LVKPRIKLLYVTPE--RAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
++LLYVTPE R ++ LL L +LA IVVDEAHCVS+WGHDFRP Y
Sbjct: 507 DRVGSLRLLYVTPEFIRQSNQAME-LLDLLYSQKRLARIVVDEAHCVSQWGHDFRPHYTE 565
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDD 276
LG LR +PI+ALTATA V +D+ S LK ++ +S+F R NL Y V
Sbjct: 566 LGALRDKYPQ-VPIMALTATANARVIKDVKSCLKMRNVLQL--SSSFNRPNLEYQV---- 618
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNK 326
K + + + I + +K + CGI+YC +RE +AD L++ K+ K
Sbjct: 619 -RKKPKSKLIDEIASFILTSHK-DECGIVYCFSRESCETVADDLKKHGITAHHYHAKLGK 676
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+RS+VQ+ + GE VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GRAGRDGL
Sbjct: 677 DDRSKVQQRWKNGEYKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGL 736
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S C +Y+S + +E ++ ++ ++ E ++ + M +CE
Sbjct: 737 DSVCILYYSWTDVRRMENMMLSEEKSQ-EAIDRSIDSLREMQRFCE 781
>gi|404497566|ref|YP_006721672.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|418065091|ref|ZP_12702466.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
gi|78195168|gb|ABB32935.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens GS-15]
gi|373562723|gb|EHP88930.1| ATP-dependent DNA helicase RecQ [Geobacter metallireducens RCH3]
Length = 601
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/428 (32%), Positives = 209/428 (48%), Gaps = 70/428 (16%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+ +F+ ++ R L+ D FV MPTG + + A R PG +
Sbjct: 10 LRTVFGYRTFRPFQEEIVTR--LIGGGDAFVLMPTGGGKSLCYQIPAIHR----PGVGIV 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + T R + S + E + +L R
Sbjct: 64 -----------VSPLISLM-------KDQVDTLRENGVAAAAYNSAMGEREARQVLA--R 103
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + LLYV PER +T++F L+ + +A +DEAHCVS+WGHDFRP Y LG
Sbjct: 104 LHAGELDLLYVAPERLMTDAFLERLREI----PVALFAIDEAHCVSQWGHDFRPEYVGLG 159
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR F G +P+IALTATA+ + DII L + +V+ T R N+ Y V+
Sbjct: 160 RLRGLFPG--VPVIALTATADVQTRSDIIDRLGL-RDAQVYVTGFDRPNIRYTVVDKQ-- 214
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K F + N+ + GI+Y +R+ ++A LR + E
Sbjct: 215 -------KPFHQLLAFLGNRPQDAGIVYALSRKRVEEVAGKLRDAGIEAAAYHAGLADGE 267
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R RVQE+F+R ++ V+ AT++FGMGID+ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 268 RGRVQEAFLRDDVRVVVATVAFGMGIDKPNVRFVVHYDLPKNIESYYQETGRAGRDGLPA 327
Query: 389 YCRI---YHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------GYF 436
+ Y +SL ++ EQ+ ++ +M+ + E GYF
Sbjct: 328 EALLLFGYGDIAVSRSL-----IESGNNPEQVRIELHKLNAMVGFAEAGTCRREALLGYF 382
Query: 437 LVILVFPC 444
L PC
Sbjct: 383 GERLAEPC 390
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 162/299 (54%), Gaps = 20/299 (6%)
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
T+ + +AI EL +P +K+LYVTPE+ + + L +L LA V+DE HCVS
Sbjct: 595 TENQAEAIYRELSKKEPALKILYVTPEKISASPKLCSTLTNLYERELLARFVIDEVHCVS 654
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
+WGHDFRP Y+RL LR +P +ALTATA P V+ DI+ L P K F +S R
Sbjct: 655 QWGHDFRPDYKRLRCLRD-NYPKVPTMALTATATPRVRTDILHQLGMTNP-KWFMSSFNR 712
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL Y +I K E + + K N CGI+YC +R+ D A +++
Sbjct: 713 PNLRYSII----AKKGKNCSDEIVAMIMTK--FKNACGIVYCLSRKDCDDYAAQMKKNGI 766
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ +RS Q ++ EI VI ATI+FGMGID+ NVRFV+H +P SI YY
Sbjct: 767 KALSYHAGLSDVQRSNCQGKWISDEIRVICATIAFGMGIDKPNVRFVIHAALPKSIEGYY 826
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
QESGRAGRDG + C ++++ + +++ D + + + N M+ +CE
Sbjct: 827 QESGRAGRDGETADCILFYNYSDMHRIRKMLELDNPSP-QVINTHMDNLFKMVAFCENS 884
>gi|361131758|gb|EHL03410.1| putative ATP-dependent DNA helicase hus2/rqh1 [Glarea lozoyensis
74030]
Length = 855
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 197/376 (52%), Gaps = 53/376 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG F+ + Q +AI + L D F+ MPTG + + A +
Sbjct: 120 LRDRFGLRGFR-QNQLEAI-NATLGGKDAFILMPTGGGKSLCYQLPA-----------VV 166
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+G R +SP+LS D+ + R+ Q LI +K E + L
Sbjct: 167 QSGKTRGVTLVVSPLLS-----LMSDQVDHLKARN--IQACLISGDTSKEERSIVFAALE 219
Query: 160 LVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
KP I+LLYVTPE A + L L R +LA IV+DEAHCVS+WGHDFRP Y+
Sbjct: 220 ERKPEQYIQLLYVTPEMVANSRKLESTLDKLHRIQRLARIVIDEAHCVSQWGHDFRPDYK 279
Query: 217 RLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV--- 272
L +LR ++ G +P IALTATA +VK D I L + +K S R NL+Y+V
Sbjct: 280 SLSKLRDRYHG--VPFIALTATATEAVKLDCIHNLGMTN-CEQYKQSFNRPNLYYEVRTK 336
Query: 273 ----IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-VNKH 327
+ +++LK+ + + + KD K N GIIY +R+ DLA+ LR K + H
Sbjct: 337 KGKGVSEEVLKN--------MSELILKDYK-NMSGIIYTLSRKGCEDLAEKLREKGIRAH 387
Query: 328 ---------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
E+ +VQ + G+ V+ ATI+FGMGID+ +VRFV+H MP S+ YYQE+
Sbjct: 388 HFHASMDAVEKHQVQRDWQAGKHQVVVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQET 447
Query: 379 GRAGRDGLQSYCRIYH 394
GRAGRDG S C +Y+
Sbjct: 448 GRAGRDGKPSGCYLYY 463
>gi|253991584|ref|YP_003042940.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
gi|211638462|emb|CAR67084.1| atp-dependent dna helicase recq (ec 3.6.1.-) [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253783034|emb|CAQ86199.1| ATP-dependent DNA helicase [Photorhabdus asymbiotica]
Length = 608
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 201/369 (54%), Gaps = 59/369 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ + + +L D V MPTG G + + I G +
Sbjct: 17 LRETFGYQQFRPGQQQ--VINTILEGRDCLVIMPTGG----GKSLCYQIPALIQEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + +++ + + S Q + + ++ R
Sbjct: 71 -----------VSPLISLM-------KDQVDQLQANGVAADCLNSTQAREQQIDVIRRCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +KLLY+ PER + ++F L+ L+ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGMVKLLYIAPERLMMDNF---LEQLLEWQP-AILAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LRQ ++P+IALTATA+ + + DI+ +L N P + S+F R N+ Y +I
Sbjct: 167 QLRQ-RFPTLPVIALTATADETTRNDIVRLLNLNNP--LIHISSFDRPNIRYTLI----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + + FI GK GIIYC +R + ++ L+++ ++
Sbjct: 219 -EKYKPLDQLWLFIRAQKGKS------GIIYCNSRSKVEETSERLQKRGLSVAPYHAGLD 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
++R+RVQ++F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDG
Sbjct: 272 NNQRARVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFNIPRNIESYYQETGRAGRDG 331
Query: 386 LQSYCRIYH 394
L + +++
Sbjct: 332 LPAEAVLFY 340
>gi|336054183|ref|YP_004562470.1| ATP-dependent DNA helicase RecQ [Lactobacillus kefiranofaciens ZW3]
gi|333957560|gb|AEG40368.1| ATP-dependent DNA helicase RecQ [Lactobacillus kefiranofaciens ZW3]
Length = 591
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 209/407 (51%), Gaps = 54/407 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+ SF+ QKK I ++L ++ MPTGA G + + I PG +
Sbjct: 7 LKQTFGYASFRPG-QKKVI-DLILNKQNVLAVMPTGA----GKSLCYQVPALINPGVTLV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K I + + + + S + E IL +
Sbjct: 61 -----------ISPLISLM-------KDQIDSLKQNGVNAAALNSTTPQEEVNPILRQA- 101
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +IKL+Y+TPER + F Y L L + + VDEAHC+S+WGHDFRP YR+L
Sbjct: 102 -YEGKIKLIYITPERLAMDYFRYQLNFL----DIDLVAVDEAHCISQWGHDFRPAYRQLL 156
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
E + I+ALTATA P+V+ DI L N P + F ++F R NL + V+ +
Sbjct: 157 EGINSLKSRPNILALTATATPAVQDDIGQQL--NIPKENFVITSFARPNLSFKVV--NSP 212
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+++ ++ ++I+K A+ GIIY TR+ L L +K + E
Sbjct: 213 QNTPLYIAQYIKK------HADEAGIIYTNTRKKVETLTAYLAKKGISVGAYHGGLKAQE 266
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS+VQE+F EI +I AT +FGMGID+ NVRFV+H +I +YYQE+GRAGRDG +S
Sbjct: 267 RSQVQEAFQFDEIQIIVATNAFGMGIDKSNVRFVIHASSARNIESYYQEAGRAGRDGEES 326
Query: 389 YC-RIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG 434
IYH ++ ++ ++D K EL+++ S+ +Y G
Sbjct: 327 EAILIYHPGDLRQYRYFIDESDAYEKYR--ELQYQKLQSITDYANTG 371
>gi|281204428|gb|EFA78623.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 1358
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 215/422 (50%), Gaps = 61/422 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+++ + + +FG SF+ L ++ I + + HDIFV MPTG G + + +
Sbjct: 674 EKINSTNRNIFGNRSFR--LNQEEIINASMAGHDIFVLMPTGG----GKSLCYQIPALLA 727
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G I++ + + + + Y T+ +TG +S + +T
Sbjct: 728 DGLTIIISPLISLIQDQVMLLQNLSY------PTAALTGS---------ISSEEQTR--- 769
Query: 154 ILEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
I +ELR P IKLLY+TPE+ V + S L L KL V+DEAHCVS+WGHDFR
Sbjct: 770 IFKELRSDNPTIKLLYLTPEKVVQSTSIISLFHQLNSRGKLIRAVIDEAHCVSQWGHDFR 829
Query: 213 PTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
P Y++L L R+F +PI+ALTATA VKQD+I L K FK S R NL Y
Sbjct: 830 PDYKQLAILKREFP--KLPILALTATATERVKQDVIFNLSM-KDSITFKQSFNRPNLIYA 886
Query: 272 V------IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
V I DD++ EFI G K+ GIIYC + +A L K
Sbjct: 887 VVKKKKSIIDDII--------EFI-TANGYKQKS---GIIYCFSTFECEKVAQELNSKGL 934
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ +R R QE++ R + +I +TI+FGMGI++ +VRFV+H +P S+ YY
Sbjct: 935 KVKFYHAKMTPEDRQRTQENWTRDRVKIIVSTIAFGMGINKPDVRFVIHHSLPKSLEGYY 994
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDT---STKREQLELKFKNYLSMLEYCE 432
QESGRAGRD ++C +Y+S K ++ ++++ + ST + E K N M+ YCE
Sbjct: 995 QESGRAGRDSQTAHCILYYSYADKYRIDSLLESSSGQGSTYQSIRENK-DNLNKMVSYCE 1053
Query: 433 QG 434
Sbjct: 1054 NS 1055
>gi|375258339|ref|YP_005017509.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|402839822|ref|ZP_10888300.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
gi|423105828|ref|ZP_17093529.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|365907817|gb|AEX03270.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca KCTC 1686]
gi|376379689|gb|EHS92440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5242]
gi|402287439|gb|EJU35887.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. OBRC7]
Length = 608
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QETIIDTALAGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N L+ + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLTHWN-LSMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRI-PQIPFMALTATADDTTRRDIVRLLDLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|238798601|ref|ZP_04642077.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
gi|238717557|gb|EEQ09397.1| ATP-dependent DNA helicase recQ [Yersinia mollaretii ATCC 43969]
Length = 610
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 213/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 17 LRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 71 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q N +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 167 QLKQRFPN-LPVIALTATADEATRGDIVRLLNLDQP--LIQVSSFDRPNIRYTLVEKFKP 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 224 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 270 LDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 330 DGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|227485303|ref|ZP_03915619.1| ATP-dependent helicase [Anaerococcus lactolyticus ATCC 51172]
gi|227236763|gb|EEI86778.1| ATP-dependent helicase [Anaerococcus lactolyticus ATCC 51172]
Length = 596
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 209/424 (49%), Gaps = 62/424 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+++ KLK FGF SF+ + Q++ I IL D+ +PTG G + + +
Sbjct: 3 EKIAEKLKKHFGFASFR-QGQEEIIGKIL-EGRDVLGVLPTGG----GKSICYQLPALMK 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + ISP++S K + R D + I S Q
Sbjct: 57 DGLTLV-----------ISPLISLM-------KDQVDALREDGIEASFINSSQDYETYID 98
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
L +LR K RIKLLY++PER E F L+ + KL+++ VDEAHC+S+WGHDFRP
Sbjct: 99 TLNDLR--KGRIKLLYISPERLDNEFFREFLREI----KLSFVAVDEAHCISQWGHDFRP 152
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
+Y+ + +L + G+ + I A TATA V+ DII L PY V T R NL + V
Sbjct: 153 SYKLIADLYKVLGDDLQIAAFTATATKEVRDDIIKNLSLKNPY-VKVTGFDRPNLKFLV- 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
KD +K ++E+ GK GIIY TR L L+
Sbjct: 211 --RKPKDKLKFLKTYLEENEGK------SGIIYASTRNRVDKLERNLKAMGFSVTKYHAG 262
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
+++ ER + QE F+ + +++ AT +FGMGID+ NV FV+H+ MP + +YYQE+GRAGR
Sbjct: 263 LSEEERKKAQEEFIFDKKDLVVATNAFGMGIDKSNVSFVIHYNMPKDMESYYQEAGRAGR 322
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK----FKNYLS--------MLEYC 431
DG + C + +S +++I T+ +++L NY++ +LEY
Sbjct: 323 DGADADCILLYSAQDIIINKHLINQGTNLAYRKIQLDKLQTIINYVNTSKCLRAFILEYF 382
Query: 432 EQGY 435
Q Y
Sbjct: 383 GQDY 386
>gi|432716451|ref|ZP_19951464.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
gi|431269860|gb|ELF61161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE9]
Length = 611
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 213/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L HD V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGHDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 IRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 207/421 (49%), Gaps = 62/421 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ +L FG SF+ Q +A+ L D+FV MPTG + + A
Sbjct: 548 EVDYRLHQSFGLRSFRPN-QLQAVNSTLA-GKDVFVLMPTGGGKSLCYQLPA-------- 597
Query: 95 GADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQ----LELIVSG 145
+ +G R ISP++S +L + K S+ + R Q L + G
Sbjct: 598 ---IVKSGKTRGTTIVISPLISLMQDQVEHLLNNNIKASMFSSRGTADQRRQTFNLFIHG 654
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
+ L+Y++PE + +E ++ L KLA IVVDEAHCV
Sbjct: 655 ------------------LLDLIYISPEMISASEQCKRGIKKLHNDGKLARIVVDEAHCV 696
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
S WGHDFRP Y+ L ++ + +P++ALTATA V+ D+I L+ P VF +F
Sbjct: 697 SNWGHDFRPDYKELKYFKREYPH-VPMMALTATASEQVRLDVIHNLELKDP--VFLKQSF 753
Query: 265 -RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R NLFY V+ K++ A + E I AN GIIYC ++ A ++R
Sbjct: 754 NRKNLFYGVVRK--TKNTIAEICESINTRF-----ANQTGIIYCHSKNSCEQTAAQIQRN 806
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
+ ERS VQ ++ ++ VI AT++FGMGID+ +VRFV H+ +P ++
Sbjct: 807 GIRCAFYHAGMEPDERSDVQRAWQNDDLQVICATVAFGMGIDKADVRFVYHYTVPRTLEG 866
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
YYQE+GRAGRDG S+C Y++ +S++ +I+ D + ++ E +++ YCE
Sbjct: 867 YYQETGRAGRDGKPSFCITYYTFRDVRSIQTMIQKDKNLDKDNKEKHLNKLQNVMMYCEN 926
Query: 434 G 434
G
Sbjct: 927 G 927
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 198/393 (50%), Gaps = 47/393 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL LK FG+++F+ +KAI + + D+ MPTG G + + + P
Sbjct: 3 ELETALKQYFGYETFRP--GQKAIIEAVYQQRDVLAVMPTGG----GKSLCYQLPALLKP 56
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ + + T + + + S T E ++
Sbjct: 57 GLAVV-----------VSPLIALM-------QDQVETLQKNGIAATFLNSSLTAEEARS- 97
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L ++ +KLLY+ PE+ V+ + LQ + + L+ +DEAHC+SEWGHDFRP
Sbjct: 98 -RRLSILNGEMKLLYLAPEKLVSPASKTFLQAVQEKHGLSLFAIDEAHCISEWGHDFRPE 156
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR+L LR IP+IALTATA V+ DII L ++P KV TS R NL+Y+V
Sbjct: 157 YRQLKTLRSLFPK-IPMIALTATATERVRSDIIHQLTLDQP-KVQITSFDRPNLYYEV-- 212
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ Y + +FI G GI+YC +R ++A L++ +
Sbjct: 213 QPKQRQHYNQLFKFIRHQTG-------SGIVYCLSRRRVEEVAFRLKKDGISALPYHAGM 265
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS Q F+R ++ V+ ATI+FGMGID+ ++RFVVH+ +P ++ YYQE+GRAGRD
Sbjct: 266 SDGNRSDYQTRFLRDDVQVMVATIAFGMGIDKPDIRFVVHYDLPRNLENYYQEAGRAGRD 325
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
+ C + ++EY I K ++L
Sbjct: 326 SEPAQCLLLFGAKDIHTIEYFISQKEDEKSQRL 358
>gi|384423525|ref|YP_005632883.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
gi|327483078|gb|AEA77485.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae LMA3984-4]
Length = 620
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI +
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYNSMH 124
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 125 --AGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|424658095|ref|ZP_18095363.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
gi|408056663|gb|EKG91539.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae HE-16]
Length = 611
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 199/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 20 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P + + S R N+ Y +L
Sbjct: 170 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPQQ-YLGSFDRPNIRY------MLV 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDTDER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 339 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 367
>gi|347536603|ref|YP_004844028.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529761|emb|CCB69791.1| ATP-dependent DNA helicase RecQ3 [Flavobacterium branchiophilum
FL-15]
Length = 702
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 193/370 (52%), Gaps = 53/370 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L KLK FGF++F+ ++AI +L D MPTG G + + I G
Sbjct: 6 LKQKLKDHFGFENFRP--NQEAIIQSVLNGQDTVAIMPTGG----GKSICFQLPALIFQG 59
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ K + + +++ I S Q E L
Sbjct: 60 LTIV-----------VSPLIALM-------KDQVDSLKANGINACFINSSQQAMEQHYYL 101
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
E++ IKL+YV PE S +YL + L +++ I +DEAHC+S WGHDFRP Y
Sbjct: 102 EQIH--NGNIKLVYVAPE-----SLNYL-EPLFASIQVSLIAIDEAHCISAWGHDFRPAY 153
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
LG L+ N+ PI+ALTATA+ + +QDI L P+ VF S R NL +V
Sbjct: 154 CNLGYLKNKFANT-PILALTATADKATRQDICDQLNLQNPH-VFVASFDRKNLSLEV--- 208
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ + VK+ ++ D KA+ GIIYC +R+ T +L++ L+ K ++
Sbjct: 209 ---RPALDRVKQIVQFI---DKKADEAGIIYCLSRKTTEELSEKLQSKGISAMAYHAGLD 262
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
H R++VQ++F+ V+ AT++FGMGID+ NVR+V+H+ +P +I YYQE GRAGRDG
Sbjct: 263 NHNRTKVQDAFINDTCQVVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 322
Query: 386 LQSYCRIYHS 395
+ ++ S
Sbjct: 323 QPAETILFQS 332
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 140/404 (34%), Positives = 206/404 (50%), Gaps = 51/404 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 639 FGLKSFRPN-QLQVINAALL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 688
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI---VSGQTKTENK-AILEELR 159
ISP+ K+ I S L L++ +SG+ E+ AI +L
Sbjct: 689 -------ISPL-----------KSLIFDQVSKLASLDICAKSMSGEQSMEDTMAIYRDLE 730
Query: 160 LVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P +KLLYVTPE+ + + F L HL N ++ V+DEAHCVS+WGHDFRP Y++L
Sbjct: 731 GHSPLVKLLYVTPEKISSSARFQDTLDHLSANNFISRFVIDEAHCVSQWGHDFRPDYKKL 790
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G LR+ N +P +ALTATA P V+QDI+ L K F +S RSNL + V L
Sbjct: 791 GILRKRFPN-VPTMALTATATPRVRQDILQQLNLTH-CKWFLSSFNRSNLRFQV----LP 844
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE------ 328
K + + E + + GIIYC +R+ ++A + R V H
Sbjct: 845 KKGASTLDEM--RSFIQTRPITASGIIYCLSRKECDEVAHKMSAAGIRAVAYHAGLTDTA 902
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ ++ ++ VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG +
Sbjct: 903 RESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIA 962
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C +Y++ L+ ++ D + + ++ N ++ YCE
Sbjct: 963 DCILYYNYSDMMRLKKMMDADRALEYHVKKIHIDNLHRIVGYCE 1006
>gi|383754954|ref|YP_005433857.1| putative ATP-dependent DNA helicase RecQ [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381367006|dbj|BAL83834.1| putative ATP-dependent DNA helicase RecQ [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 593
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 204/404 (50%), Gaps = 55/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +G+ F+ +K + LL HD MPTGA G + + + PG +
Sbjct: 13 LRKYYGYPDFRP--AQKPVVESLLSGHDTVAIMPTGA----GKSICFQLPSLVFPGITLV 66
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
ISP++S +D ++ G Y + Q+ +AI E
Sbjct: 67 -----------ISPLIS----LMKDQVDALAEQGVPATYINSQLTLDQSTARFQAIAEG- 110
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
R KL+YV PER T+ F Y+++ +++ + VDEAHC+S+WGHDFRP+YR++
Sbjct: 111 -----RYKLVYVAPERLDTDYFRYVIER----QEISMVAVDEAHCLSQWGHDFRPSYRQI 161
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
+ A TATA P VK DIIS+L +P+ + T R NL+++V +
Sbjct: 162 APFIAGLPRRPLVSAFTATATPEVKDDIISLLHLRQPH-IHVTGFDRPNLYFEVRRGE-- 218
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+FIE+ L + G+IY TR+ L + L +K ++ +
Sbjct: 219 -----DKKKFIERYL--KTHSEEAGVIYAATRKEVDSLYEHLLKKKFSVGRYHAGLSDKQ 271
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R++ Q+ F+ + VI AT +FGMGID+ NVRFV+H+ MP +I AYYQE+GRAGRDG
Sbjct: 272 RNQAQDDFLYDNVQVIVATNAFGMGIDKSNVRFVIHYNMPKNIEAYYQEAGRAGRDGEPG 331
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS-MLEYC 431
C + +S + +Y+I D ST+ E+ + L M++YC
Sbjct: 332 TCILLYSPQDVMTQKYLI--DVSTENEERKAHNLGTLQKMVDYC 373
>gi|149057328|gb|EDM08651.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149057329|gb|EDM08652.1| Bloom syndrome homolog (human) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 999
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 200/391 (51%), Gaps = 56/391 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ + FG +F+ Q +AI LL D F+ MPTG G + + +
Sbjct: 644 KEMMKIFRKKFGLHNFRTN-QLEAINAALL-GEDCFILMPTGG----GKSLCYQLPACVS 697
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL----IVSGQTKT 149
PG + ISP+ ++ IV L ++ + +T +
Sbjct: 698 PGVTIV-----------ISPL-----------RSLIVDQVQKLTSFDIPATYLTGDKTDS 735
Query: 150 ENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I +L P IKLLYVTPE+ + L++L LA V+DEAHCVS+WG
Sbjct: 736 EAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWG 795
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFR Y+R+ LRQ S+P++ALTATA P V++DI++ LK +P +VF S R NL
Sbjct: 796 HDFRQDYKRMNMLRQ-RFPSVPVMALTATANPRVQKDILTQLKILRP-QVFSMSFNRHNL 853
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLG--KDNKANNCGIIYCRTREHTTDLADALRRK--- 323
Y V+ K+ CL + + + GIIYC +R+ +AD L+R+
Sbjct: 854 KYYVL--------PKKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREGLA 905
Query: 324 -------VNKHERSRVQESFM-RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R VQ ++ + VI ATI+FGMGID+ +VRFVVH +P S+ YY
Sbjct: 906 ALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRFVVHASLPKSVEGYY 965
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVI 406
QESGRAGRDG S+C ++++ H L+ +I
Sbjct: 966 QESGRAGRDGEISHCVLFYTYHDVTRLKRLI 996
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 168/286 (58%), Gaps = 26/286 (9%)
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
E L +I+LL+V+PER + F L++ + I VDEAHC+SEWGH+FRP YR
Sbjct: 99 EADLKNGKIRLLFVSPERCMQAGF----LDLIKAAPIRLIAVDEAHCISEWGHNFRPEYR 154
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
+L +L++ ++P++ALTATA P V++DI L + ++ F S R NL Y V+
Sbjct: 155 QLAQLKKLF-PAVPLVALTATAIPEVRRDICQQLGISDAHE-FVGSFNRKNLMYRVVEK- 211
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
K+ + F+ + + GIIYC +++ T ++A LRR+ ++K
Sbjct: 212 --KNPKILLLTFLSR------HQHESGIIYCMSKKETEEVARDLRRRGYNAQAYHAGLSK 263
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R++VQ+ F++ I ++ ATI+FGMGID+ +VRFV+H+ +P ++ +YYQE+GRAGRDG
Sbjct: 264 QVRTKVQDGFIKNTITIVCATIAFGMGIDKPDVRFVIHYDIPKTVESYYQETGRAGRDGR 323
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S C +++S + +++ D T+R L + M EYCE
Sbjct: 324 PSECVLFYSRGDIARVRSMLEHDHMTER-NLRASLRKLQEMTEYCE 368
>gi|397655279|ref|YP_006495981.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
gi|394344006|gb|AFN30127.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca E718]
Length = 608
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QETIIDTALAGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N L+ + VDEAHC+S+
Sbjct: 100 SREQQQDVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLTHWN-LSMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRI-PQIPFMALTATADDTTRRDIVRLLDLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|147559|gb|AAA24517.1| recQ [Escherichia coli]
Length = 610
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 213/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A AL+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAAALQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 210/416 (50%), Gaps = 50/416 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ KL A F F+ + Q +AI + L D FV MPTG + + A
Sbjct: 869 EVKQKLTARFHLRGFR-QNQLEAI-NATLGGKDTFVLMPTGGGKSLCYQLPA-------- 918
Query: 95 GADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
I +G R ISP+LS +L+ + ++ +++SG
Sbjct: 919 ---IIRSGTTRGVTIVISPLLSLMQDQVDHLQKLGIQAFVINSEVTQSYKNMVMSG---- 971
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
LEE R+ + ++LLYVTPE +E+ L R +KLA IV+DEAHCVS+WG
Sbjct: 972 -----LEE-RIPEDFVELLYVTPEMVTKSEAILSRFASLHRRHKLARIVIDEAHCVSQWG 1025
Query: 209 HDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFRP Y+ LGE+R +F G +PI+ALTATA +VK D+I L + + S R N
Sbjct: 1026 HDFRPDYKELGEVRARFPG--VPIMALTATATENVKVDVIHNLAMEG-CQQYTQSFNRPN 1082
Query: 268 LFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKH 327
L Y+V K + + + I + + K K GIIY +R++ +AD L + N
Sbjct: 1083 LTYEV----RPKPKHEELMKSIVEIITKKYKGQ-TGIIYALSRKNCEKVADELSTRYNIK 1137
Query: 328 -----------ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
E+ RVQ+ + G+ VI ATI+FGMGID+ NVRFV+H MP S+ YYQ
Sbjct: 1138 ACHYHAALKPIEKKRVQQDWQAGKWQVIVATIAFGMGIDKANVRFVIHQTMPKSLEGYYQ 1197
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG S C +Y+ L I+ D EQ + + M ++CE
Sbjct: 1198 ETGRAGRDGKLSGCYLYYGYQDTTVLRKFIE-DGDGSHEQKDRQRSMLNRMSQFCE 1252
>gi|417838967|ref|ZP_12485182.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19107]
gi|341955862|gb|EGT82310.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M19107]
Length = 619
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 208/389 (53%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I H L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-HAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + +
Sbjct: 68 -----DGLTLVISPLISLM-------KDQVDQLQANGIEADFLNSSQTLEQQQQVQN--K 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGH+FRP Y +LG
Sbjct: 114 LISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHNFRPEYTQLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI++ L P+K + S R N+ Y L+
Sbjct: 170 GLKASFPHA-PIMALTATADYATRQDILTHLNLENPHK-YIGSFDRPNIRYT------LE 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y +++ I L + K+ GIIYC +R +A++LR K + R
Sbjct: 222 EKYKPMEQLIRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAVR 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
VQ+ F + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 279 ECVQQDFQSDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 339 AVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|258574619|ref|XP_002541491.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
gi|237901757|gb|EEP76158.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
Length = 1432
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 216/419 (51%), Gaps = 54/419 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIP 93
++ A L+ +F F+ Q +AI + L D FV MPTG SL + S
Sbjct: 610 DVKAALRDVFKLRGFRPN-QLEAI-NATLNGKDAFVLMPTGGGKSLCYQLPSV------- 660
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G R ISP+LS DD+ + RS + I + +
Sbjct: 661 -----VQSGRTRGVTVVISPLLS-----LMDDQVEQL--RSLSIKAHFINGSLSAADRCE 708
Query: 154 ILEELRLVKPRI----KLLYVTPERAVTESFHYL--LQHLVRYNKLAYIVVDEAHCVSEW 207
IL L KPR+ ++LYVTPE V +S L L+ L R K A +V+DEAHCVS+W
Sbjct: 709 ILAYLH--KPRVEDYLQILYVTPE-MVNKSRVMLGALRQLHRAKKFARLVIDEAHCVSQW 765
Query: 208 GHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y+ LGE R +F G +P++ALTATA +V+ D+I L + F S R
Sbjct: 766 GHDFRPDYKELGEFRREFRG--VPLMALTATATKNVEVDVIHNLGMQG-CETFTQSFNRP 822
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--- 323
NL Y+V K +Y E I + + D GIIYC +R++ LA LR K
Sbjct: 823 NLTYEV----RTKVNYDETLESISRII--DFHYGKTGIIYCLSRKNCERLATDLRVKHQI 876
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ +R VQ + GE VI ATI+FGMGID+ +VRFV+H +P S+ YY
Sbjct: 877 RATHYHAGMDADQRIDVQRKWQSGEHQVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYY 936
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKR--EQLELKFKNYLSMLEYCE 432
QE+GRAGRDG +S C +++ ++ +I D S K+ +Q E + + ++++C+
Sbjct: 937 QETGRAGRDGKRSECFLFYGYRDAIAIRKIIDDDKSGKKDGQQKERQHQMLQHVIQFCQ 995
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 208/414 (50%), Gaps = 49/414 (11%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
EL KL+ +F +F+ + Q AI + L D+F+ MPTG + + + R +
Sbjct: 219 ELVYKLQNVFKLPNFRSD-QLSAI-NATLSGDDVFILMPTGGGKSLCYQLPSIIRSGVTC 276
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSD-LYQLEL---IVSGQTKTE 150
G + ISP++S ++ + D L QL + +S + T
Sbjct: 277 GTTIV-----------ISPLIS------------LMQDQIDHLLQLNIKACSISSKLSTS 313
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ L + LLY++PE ++ F L L + KLA I VDEAHC+S WGH
Sbjct: 314 QRNFYFSL-FANGDLDLLYISPEMLTASKKFKTTLDKLHKSRKLARIAVDEAHCLSNWGH 372
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y+ L R IPI+ALTATA V+ DII L+ +P V K S R+NLF
Sbjct: 373 DFRPDYKNLDYFR-INYPDIPIVALTATANNLVQDDIIRNLRLGRPL-VLKQSFNRNNLF 430
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V L KD V I + D K+ + GI+YC +++ ++ AL +
Sbjct: 431 YEV----LPKDKKI-VTSQIASYILNDFKSQS-GIVYCHSKDTCEKVSMALTQMGVKASF 484
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ +R VQ+ + VI AT++FGMGID+ +VRFV+H+ +P S+ YYQE+G
Sbjct: 485 YHAGMTNKQRDHVQKLWQSNRYQVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQETG 544
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
RAGRDG SYC ++S + +SL+ +I+TD +E ++ YCE
Sbjct: 545 RAGRDGNFSYCITFYSFNDVRSLQKLIQTDKGLNKENKLTHLDKLQHVMAYCEN 598
>gi|440714432|ref|ZP_20895011.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SWK14]
gi|436440628|gb|ELP33932.1| ATP-dependent DNA helicase, RecQ family [Rhodopirellula baltica
SWK14]
Length = 1002
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 163/283 (57%), Gaps = 29/283 (10%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
Q L+ S Q+ + ++++EE+ K + L+YV PER F +V ++ +
Sbjct: 113 QARLLNSTQSPGQQESVMEEMAAGK--LDLIYVAPERLRNGRFL----DVVPKANVSLLA 166
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYK 257
VDEAHCVSEWGHDFRP Y RLG R + I LTATA P+V+ DI +L +P +
Sbjct: 167 VDEAHCVSEWGHDFRPDYSRLGRFRDRYLGGVQTIGLTATATPTVRDDICELLNLKQP-R 225
Query: 258 VFKTSTFRSNLFYDVIF--DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTD 315
VF T R+NL + V +D+ K + +++++ K G GIIY TR+ +
Sbjct: 226 VFVTGFARTNLRFTVTPCNNDVAKQNA--LRDYLAKQPG-------AGIIYGATRKRCEE 276
Query: 316 LADALRRKVNK-----------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
+A+ L K + ER RVQ++FM+G+++ I AT +FGMGID+ ++RFVVH
Sbjct: 277 IAEWLPEKTGRKVGVYHAGMHPDERRRVQDAFMKGDLSAIVATNAFGMGIDKSDIRFVVH 336
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIK 407
+ MP S+ AYYQE+GRAGRDG S C + + ++ E+ I+
Sbjct: 337 YNMPGSLEAYYQEAGRAGRDGEMSQCLLLFAYSDRQIQEFFIE 379
>gi|340502580|gb|EGR29257.1| hypothetical protein IMG5_159830 [Ichthyophthirius multifiliis]
Length = 356
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 165/287 (57%), Gaps = 24/287 (8%)
Query: 166 KLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQF 224
K+L VTPE+ + ++ F+ L KL VVDEAHCVS WGHDFR Y +LG L+Q
Sbjct: 73 KILLVTPEKIMQDNNFNSFLIKCNNIGKLKRFVVDEAHCVSHWGHDFRKDYCQLGNLKQQ 132
Query: 225 TGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAH 284
N +P++ALTATA K DII +K K F+ S R NL+YDVI H
Sbjct: 133 FPN-VPVLALTATATEKCKIDIIKQMKI-KGASYFQCSFNRPNLYYDVI-QVPNNQVIQH 189
Query: 285 VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKHERSRVQ 333
+ FI++ + + GIIYC T++ T L++ L +K ++ E+ +VQ
Sbjct: 190 MVTFIKEKFNRQS-----GIIYCCTKKDTRSLSEELTKKHGINSCYYNSKLSDSEKDKVQ 244
Query: 334 ESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIY 393
+M+ +I +I ATI+FGMGID+ +VRFV+H+ S+ YYQE+GRAGRDG S+CRIY
Sbjct: 245 NLWMQNDIQIICATIAFGMGIDKPDVRFVIHYSFSKSLEGYYQEAGRAGRDGKISHCRIY 304
Query: 394 HSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVIL 440
+S K SL ++I T +++ LK + Y + + Q + +L
Sbjct: 305 YSPSDKSSLSFLINKGTGSEK----LKAQQYTQLQKMIRQNFQFFLL 347
>gi|423126736|ref|ZP_17114415.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
gi|376396730|gb|EHT09369.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5250]
Length = 608
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 217/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QETIIDTALAGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N L+ + VDEAHC+S+
Sbjct: 100 SREQQQDVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLTHWN-LSMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ + IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRIPH-IPFMALTATADDTTRRDIVRLLDLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|359687049|ref|ZP_09257050.1| DNA helicase [Leptospira licerasiae serovar Varillal str. MMD0835]
gi|418750212|ref|ZP_13306498.1| ATP-dependent DNA helicase, RecQ family [Leptospira licerasiae str.
MMD4847]
gi|418755960|ref|ZP_13312148.1| ATP-dependent DNA helicase, RecQ family / HRDC domain multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|384115631|gb|EIE01888.1| ATP-dependent DNA helicase, RecQ family / HRDC domain multi-domain
protein [Leptospira licerasiae serovar Varillal str. VAR
010]
gi|404272815|gb|EJZ40135.1| ATP-dependent DNA helicase, RecQ family [Leptospira licerasiae str.
MMD4847]
Length = 621
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 192/362 (53%), Gaps = 45/362 (12%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRIPPGADFILNG 102
FGF F+ + Q +AI+ +L R D+ +PTGA SL+ ++P A+
Sbjct: 23 FGFSQFR-QGQWEAIQALLER-KDVLAILPTGAGKSLI---------YQLPSFAE----- 66
Query: 103 NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVK 162
S ISP+++ D+ + R Q S Q E +L
Sbjct: 67 -SSSLTIVISPLIA-----LMKDQVDGLKARG--IQAAYCNSTQDDLEQVRVLSSA--AT 116
Query: 163 PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
+I++LY++PERAV+ SF LL L ++ + VDEAHCVS+WGHDFRP YR+L LR
Sbjct: 117 GKIRILYISPERAVSRSFLNLLPKL----PVSLMAVDEAHCVSQWGHDFRPEYRKLHTLR 172
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSY 282
+ P +ALTATA VK+DI L P V T R NL + V++ D ++
Sbjct: 173 SYLQEGTPWVALTATATDRVKKDISDSLGLKSPLYVQGTYA-RENLKFSVVYPDSEREKE 231
Query: 283 AHVKEFIEKCLGKDNKANNC-GIIYCRTREHTTDLADALRR---KVNKH-------ERSR 331
+ + E +EK G K+ + IIYC TR ++ + LR+ KV K+ R R
Sbjct: 232 SSLLEILEK--GNFQKSTSGKAIIYCSTRAKVDEIYELLRKSGYKVGKYHAGRTDSSRER 289
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
QE + G+ N++ AT +FGMG+D NVR V+H+ +PSS+ +YYQE+GRAGRDG S C
Sbjct: 290 TQEGYTSGKTNILVATNAFGMGLDSPNVRLVLHYQVPSSLESYYQEAGRAGRDGKNSDCI 349
Query: 392 IY 393
++
Sbjct: 350 LF 351
>gi|27364385|ref|NP_759913.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
gi|27360504|gb|AAO09440.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus CMCP6]
Length = 611
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 214/412 (51%), Gaps = 54/412 (13%)
Query: 25 DRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVV 84
D G ++ Q + L +FG+ +F+ E Q+ I + D V MPTG + +
Sbjct: 8 DPSDGSMTPQSV---LSQVFGYQTFR-EGQQSVIE-AAVEGKDSLVIMPTGGGKSLCYQI 62
Query: 85 SARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVS 144
A R PG + ISP++S K + +++ E + S
Sbjct: 63 PALVR----PGITLV-----------ISPLISLM-------KDQVDQLKANGVAAECVNS 100
Query: 145 GQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
++ ++ R+ ++KL+YV+PER + F L++L LA I VDEAHC+
Sbjct: 101 TLSRDALLSVYN--RMHAGQLKLVYVSPERVLMRDFIERLENL----PLAMIAVDEAHCI 154
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
S+WGHDFRP Y LG+L+ + +P +ALTATA+ + ++DI+S L N+P+ V+ S
Sbjct: 155 SQWGHDFRPEYAALGQLKHHFPH-VPFMALTATADDATRKDILSRLHLNEPH-VYLGSFD 212
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---- 320
R N+ YD++ + + V + I +++ NCGIIYC +R+ L + L
Sbjct: 213 RPNIRYDLV------EKHKPVSQVIRYL---ESQKGNCGIIYCGSRKKVEMLTEKLCNNH 263
Query: 321 ------RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ ER+ VQE+F R +I ++ AT++FGMGI++ NVRFVVH+ +P +I +Y
Sbjct: 264 IRAAGYHAGMDADERAYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRNIESY 323
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
YQE+GRAGRDGL + + + L ++ ++Q+E N +S
Sbjct: 324 YQETGRAGRDGLPAEAMMLYDPADITWLRRMLDEKDDGPQKQVESHKLNAMS 375
>gi|148221|gb|AAA67618.1| DNA-dependent ATPase, DNA helicase [Escherichia coli str. K-12
substr. MG1655]
Length = 610
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 213/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A AL+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAAALQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|24375725|ref|NP_719768.1| ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
gi|24350662|gb|AAN57212.1|AE015857_5 ATP-dependent DNA helicase RecQ [Shewanella oneidensis MR-1]
Length = 607
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 128/402 (31%), Positives = 219/402 (54%), Gaps = 54/402 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L+ +L +FG+ F+ + Q++ I + R D V MPTG + + A
Sbjct: 13 LSERLAQVFGYRDFR-DGQREVIERVC-RGEDCLVIMPTGGGKSLCYQLPA--------- 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAI 154
+++G I+ ++S +D S++ TG + Y + S Q + + +
Sbjct: 62 --LMMHG--------ITIVVSPLISLMKDQVDSLLQTGVNAAY----LNSSQPRELSLEV 107
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L +L L + +KLLYV+PER +T F +Q L L+ +DEAHC+S+WGHDFRP
Sbjct: 108 LRQLHLGE--LKLLYVSPERLLTADFIERMQSL----PLSMFAIDEAHCISQWGHDFRPE 161
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
Y LG+L+Q + +P++ALTATA+ + +Q+I L N P+K+ +S R N+ Y V
Sbjct: 162 YAALGQLKQLFPH-VPMMALTATADQATRQNICERLGIN-PFKLL-SSFDRPNIRYTVA- 217
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ L ++ +++F+ + + + GIIYC +R ++A+ L + +
Sbjct: 218 EKL--NAANQLRQFLLQ------QNGSSGIIYCSSRRRVDEVAERLTLQGFHAKAYHAGM 269
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ER VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+GRAGRD
Sbjct: 270 TPEERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRD 329
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
GL++ + + ++I+ ++Q+E N ++
Sbjct: 330 GLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|169603998|ref|XP_001795420.1| hypothetical protein SNOG_05008 [Phaeosphaeria nodorum SN15]
gi|160706490|gb|EAT87399.2| hypothetical protein SNOG_05008 [Phaeosphaeria nodorum SN15]
Length = 413
Score = 191 bits (484), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/326 (35%), Positives = 179/326 (54%), Gaps = 32/326 (9%)
Query: 138 QLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIV 197
++E I S E + ILE+L+ P +LLYVTPE + F +L+ + +LA I
Sbjct: 26 RVETINSTTPPPERRRILEDLQCGHPLTRLLYVTPEFCQGDQFRRILRVIHSQKELARIA 85
Query: 198 VDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFN-KPY 256
VDEAHCVSEWGHDFRP++++L ++ + +PII LTATA V+ DII L +
Sbjct: 86 VDEAHCVSEWGHDFRPSFQQLSFFKEEFPD-VPIICLTATATARVRDDIIKTLALDTTKL 144
Query: 257 KVFKTSTFRSNLFYDVIFDDLLKDSY---------AHVKEFI--EKCLGKDNKANNC-GI 304
K+F+ +T R NL Y++ F + +D Y AH + E+ ++ +A+N GI
Sbjct: 145 KMFRMTTSRPNLHYEIRFKNDQEDQYPDFLRWLKAAHARRAANPERLATQNQRADNVPGI 204
Query: 305 IYCRTREHTTDLADALRRK----------VNKHERSRVQESFM--RGEINVITATISFGM 352
IY R+ LA LR + ER+ E ++ + +V+ AT +FGM
Sbjct: 205 IYTLFRKDCESLAARLRSDGIGAKPYHAGLPHAERADALEGWVANKAGYDVVVATTAFGM 264
Query: 353 GIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTS- 411
GID++NVRFV HW +P S +YQE+GRAGRDG S C +Y+ + ++ D +
Sbjct: 265 GIDKENVRFVAHWQLPKSFEGFYQEAGRAGRDGKASVCMLYYGREDRDRAGQMMARDHAR 324
Query: 412 -----TKREQLELKFKNYLSMLEYCE 432
T + QL+ + + +++++YCE
Sbjct: 325 QPKGGTMQVQLQHRQNSLVALVKYCE 350
>gi|255531800|ref|YP_003092172.1| RecQ family ATP-dependent DNA helicase [Pedobacter heparinus DSM
2366]
gi|255344784|gb|ACU04110.1| ATP-dependent DNA helicase, RecQ family [Pedobacter heparinus DSM
2366]
Length = 630
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 198/377 (52%), Gaps = 52/377 (13%)
Query: 37 TAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGA 96
T LK +G+D F+ LQ + IR +L D +PTG G + + + G
Sbjct: 4 TEILKRYWGYDGFR-PLQDEIIRSVL-NGQDTLALLPTGG----GKSICFQVPAMLKEGI 57
Query: 97 DFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
+ ISP+++ K + ++ I +G K E +L+
Sbjct: 58 CIV-----------ISPLVALM-------KDQVEALKAKGIDAVAIYAGMGKREIDILLD 99
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
+ +IK LY++PER ++E L++ + Y + I VDEAHC+S+WG+DFRP Y
Sbjct: 100 NC--IYGKIKFLYLSPERLLSE----LVRVRISYMNVNLIAVDEAHCISQWGYDFRPPYL 153
Query: 217 RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDD 276
++ E+R+ + +P++ALTATA V+ DI+ L+F KP+ VF S R NL Y V+ DD
Sbjct: 154 KVSEIREIHPD-VPVLALTATATKFVRTDIMEKLQFKKPH-VFVQSFARKNLSY-VVQDD 210
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
+D Y +K + NK G++Y R R T ++A L R V K
Sbjct: 211 --EDKY-------KKLISIVNKVRGSGLVYVRNRRETAEVASFLSRNGVAADFYHAGVEK 261
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
ER R QE + R I V+ AT +FGMGID+ +VRFVVH +P S+ AYYQE+GRAGRDG
Sbjct: 262 EERFRKQEDWKRNRIRVMVATNAFGMGIDKPDVRFVVHLDLPESLEAYYQEAGRAGRDGK 321
Query: 387 QSYCRIYHSEHSKKSLE 403
++Y + ++ + SL+
Sbjct: 322 KAYTILLANKSDELSLK 338
>gi|389744568|gb|EIM85750.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 814
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/386 (32%), Positives = 200/386 (51%), Gaps = 46/386 (11%)
Query: 29 GKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
GK + + LK +FG + +K ++K I D+ V PTG + V A +
Sbjct: 10 GKFTLDDCLHVLKDVFGHEDYKG--KQKEIFEAAASGRDVLVVAPTGMGKSICFQVPALA 67
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP+L+ K + R + ++ + S ++
Sbjct: 68 QDE---GLTIV-----------VSPLLALI-------KNQVARLRQNHVRVAALSSDVSR 106
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I E+L +P +LLY+TPER T H LL + N L +VVDEAHC+SEWG
Sbjct: 107 LEQDEIKEDLSSGEPSNRLLYITPERLSTGEIHRLLTVVYEANNLNRLVVDEAHCISEWG 166
Query: 209 HDFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSN 267
HDFR YR+LG R+F G +PI+ALTA+A P+V+ DII L+ ++ + RSN
Sbjct: 167 HDFRAEYRQLGAFRRKFPG--VPIMALTASATPTVQDDIIKSLRMSEDHCKLVHPFNRSN 224
Query: 268 LFYDVIFDDLLKDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALR--- 321
LFY+V + D+ +++ +I + N+ ++ GI+YCRTR +L+ LR
Sbjct: 225 LFYEVRY-HASNDTMVQMEDVFSYISSLHRRRNRPSS-GIVYCRTRATCNELSHFLRGRG 282
Query: 322 -------RKVNKHERSRVQESFMRG-----EINVITATISFGMGIDRQNVRFVVHWGMPS 369
+ + + +++G I+++ ATI+FGMGID+ +VR+++H+ +P
Sbjct: 283 LNSKPYHKGIKPDALDKTLTDWLKGGDGEEGIDIVCATIAFGMGIDKSDVRYIIHFDLPK 342
Query: 370 SIPAYYQESGRAGRDGLQSYCRIYHS 395
S YYQE+GRAGRD L + C +Y S
Sbjct: 343 SFEGYYQETGRAGRDDLAAKCVLYFS 368
>gi|284034978|ref|YP_003384908.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283814271|gb|ADB36109.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 707
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 191/373 (51%), Gaps = 53/373 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
Q+ LK +G+D F+ ++AI +L D V MPTG G V + +
Sbjct: 9 QQPADYLKRYYGYDRFRP--MQEAIIQSILSGRDTVVLMPTGG----GKSVCFQIPALML 62
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ K + + Q S QT E +
Sbjct: 63 PGLTVV-----------VSPLIALM-------KDQVGALHMNGIQAAFYNSTQTSREQRE 104
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I E + ++KLLYV+PE+ +TESF L L+ +DEAHC+S WGHDFRP
Sbjct: 105 I--ENDCISGKLKLLYVSPEKLLTESFFQFLS----LTNLSLFAIDEAHCISSWGHDFRP 158
Query: 214 TYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
Y +L L+ QF ++P IALTATA+ +QDI + L N P +F S R NL V
Sbjct: 159 EYTQLHVLKEQFP--TVPTIALTATADKLTRQDIATRLGMNDP-AIFVDSFNRKNLSLQV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ +++ I K + GIIYC +R+ T LA L+ K
Sbjct: 216 L------PGQNRIQQIIRLL---QQKPDTSGIIYCLSRKSTESLAAKLQEKGFSAAFYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS+ QE+F+R ++ +I ATI+FGMGID+ NVR+V+H+ MP +I ++YQE GRAG
Sbjct: 267 KMDPDDRSKTQEAFLRDDVRIICATIAFGMGIDKSNVRWVIHYNMPKNIESFYQEIGRAG 326
Query: 383 RDGLQSYCRIYHS 395
RDG + +++S
Sbjct: 327 RDGAAAQTVLFYS 339
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 203/388 (52%), Gaps = 52/388 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-----VSLVGSVVSARSRVRIPP 94
LK F F+ Q +AI + L +D+FV MPTG L V S +++
Sbjct: 873 LKTTFKLKGFRAN-QLEAI-NATLGGNDVFVLMPTGGGKSLCYQLPAVVSSGKTK----- 925
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G F+ ISP+LS + + D + R+ ++ + T E + I
Sbjct: 926 GITFV-----------ISPLLS--LMEDQVDHLGALKIRAFMFNSSI-----TAEERREI 967
Query: 155 LEELRL--VKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
L+EL+ I+LLYVTPE A ++ + L + N +A +V+DEAHCVS+WGHDF
Sbjct: 968 LKELKSPDAATSIQLLYVTPEMLASSKMMEAAMGSLHKRNLIARVVIDEAHCVSQWGHDF 1027
Query: 212 RPTYRRLGELRQFTG-NSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
R Y+ LG+LR TG +P +ALTATA P V+QD++ L K K FK S R NL Y
Sbjct: 1028 RKDYKELGKLR--TGLRGVPFMALTATATPQVQQDLMRNLSITK-CKTFKQSFNRPNLVY 1084
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V L K V + I + K CGI+YC ++ ++ L++
Sbjct: 1085 EV----LEKVKGGQVVQDIINLIQTSYKGK-CGIVYCLSKNDCEQVSSHLQKARILANFY 1139
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER VQ+ + GE+ VI ATI+FGMGID+ +VRFV+H +P S+ YYQE+GR
Sbjct: 1140 HAGLTTDERRNVQKRWQCGELKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGR 1199
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKT 408
AGRDG S C +++S + + +I+T
Sbjct: 1200 AGRDGKISGCYLFYSGNDMMRILKMIET 1227
>gi|258625868|ref|ZP_05720743.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
gi|258581832|gb|EEW06706.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM603]
Length = 620
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L+ D V MPTG + + A R G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIDAALQGRDSLVIMPTGGGKSLCYQIPALVR----EGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L +L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSNL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 209/415 (50%), Gaps = 48/415 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L L FG F+ Q +AI L H FV MPTG SL + S
Sbjct: 834 QDLRTALLHRFGLRGFRPG-QLEAINTTLSGDH-CFVLMPTGGGKSLCYQLPS------- 884
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
I +G R +SP+LS +D+ R + Q LI T +
Sbjct: 885 -----VIASGKTRGVTIVVSPLLS-----LMEDQVDACRNRFAM-QAFLINGESTAAQKN 933
Query: 153 AILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I++ LR P+ I++LYVTPE + + Q L LA IV+DEAHCVS+WGH
Sbjct: 934 MIMDALRQRDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGH 993
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG++ RQF G +P+IALTATA V+ D+++ L + + S R NL
Sbjct: 994 DFRPDYKALGDVVRQFPG--VPVIALTATATQLVRTDVVANLGIQG-CRQYSQSFNRPNL 1050
Query: 269 FYDVIFDDLLKDSYAHVKEFI-EKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
Y+V+ K + + I EK GK GIIYC +R+ +A L
Sbjct: 1051 SYEVLPKG--KGVINSIADLIKEKYTGK------SGIIYCLSRKTCEQVAQKLSETGIRA 1102
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +RS VQ + + E +VI ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 1103 YHYHAGMDSADRSEVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQE 1162
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +Y+ + L +I + REQ + ++++YCE
Sbjct: 1163 TGRAGRDGKRSECYLYYMYGDSRILRKMIDEGEGS-REQKQRLNDMLRTVVQYCE 1216
>gi|404485707|ref|ZP_11020904.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
gi|404338395|gb|EJZ64842.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
Length = 726
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 209/402 (51%), Gaps = 65/402 (16%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARS 88
E LT +LK FGFD+FK ++AI LL +D FV MPTG + S++ +
Sbjct: 4 EVNLTEELKRNFGFDTFKG--NQEAIIRNLLAGNDTFVLMPTGGGKSLCYQLPSLILDGT 61
Query: 89 RVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV 143
+ I P + N N + +G I SS +KT+I ++D I+
Sbjct: 62 AIVISPLIALMKNQVDAMRNFSAEDGVAHFINSSL------NKTAIDQVKTD------IL 109
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
SG+T KLLYV PE E L+ + +++ VDEAHC
Sbjct: 110 SGKT------------------KLLYVAPESLTKEENIDFLKQV----NVSFYAVDEAHC 147
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+SEWGHDFRP YRR+ + G P+IALTATA P V+ DI L + VFK+S
Sbjct: 148 ISEWGHDFRPEYRRIRPIINEIGVR-PVIALTATATPKVQHDIQKNLGMLEA-TVFKSSF 205
Query: 264 FRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-- 321
R NL+Y+V + A++ + I K + ++ GIIYC +R+ +LA+ L+
Sbjct: 206 NRPNLYYEV------RPKTANIDKDIIKYI--KSQEGKSGIIYCLSRKKVEELAELLQVN 257
Query: 322 --RKVNKHE------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
R + H R++ Q++F+ +I+VI ATI+FGMGID+ +VR+V+H+ +P S+
Sbjct: 258 GIRALPYHAGMDSATRTQNQDAFLLEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEG 317
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YYQE+GRAGRDG + C ++ + LE ++ ++E
Sbjct: 318 YYQETGRAGRDGGEGQCITFYINKDLQKLEKFMQGKPIAEQE 359
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 212/427 (49%), Gaps = 63/427 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL A K +FG SF+ ++ I + + D+FV MPTG G ++ + I
Sbjct: 353 KELEAHNKRVFGNHSFR--PNQREIINATMYGSDVFVLMPTGG----GKSLTYQLPALID 406
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
G + + P++S +D + L V TE +
Sbjct: 407 EGITLV-----------VCPLVS----LIQDQIMHLAQANIPAICLSANVEW---TEQQR 448
Query: 154 ILEELRLVKPR----IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
IL +L + P KLLYVTPE+ A +++ L+ L L+ IV+DEAHCVS+WG
Sbjct: 449 ILRDL--MSPSSTCTYKLLYVTPEKIAKSDALLRQLEILYSRGHLSRIVIDEAHCVSQWG 506
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
HDFRP Y+ LG L+Q + P++ALTATA SVK+D++ L VF+ S R NL
Sbjct: 507 HDFRPDYQHLGLLKQKFPET-PVLALTATATASVKEDVVQALGLANCV-VFRQSFNRPNL 564
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR------ 322
Y V+ K + FI K+ CGIIYC +R +A LR
Sbjct: 565 RYIVMPK--TKKCLEDIDNFIRASHHKE-----CGIIYCLSRMDCEKVAAKLREYGHKAS 617
Query: 323 ----KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
++ +R+ +Q + R +IN+I AT++FGMGI++ +VRFV+H +P SI Y+QE
Sbjct: 618 HYHGSMDPLDRTEIQRQWSRDKINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQEC 677
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDT-------------STKREQLELKFKNYL 425
GRAGRDG +S C +Y++ ++++I S+ R+ LE +N L
Sbjct: 678 GRAGRDGQRSSCVLYYNYSDYIRVKHMITQGVVEQETSMPRGGSLSSHRQALETHKENLL 737
Query: 426 SMLEYCE 432
M+ YCE
Sbjct: 738 CMVSYCE 744
>gi|255525959|ref|ZP_05392885.1| ATP-dependent DNA helicase RecQ [Clostridium carboxidivorans P7]
gi|296188671|ref|ZP_06857059.1| ATP-dependent DNA helicase RecQ [Clostridium carboxidivorans P7]
gi|255510378|gb|EET86692.1| ATP-dependent DNA helicase RecQ [Clostridium carboxidivorans P7]
gi|296046935|gb|EFG86381.1| ATP-dependent DNA helicase RecQ [Clostridium carboxidivorans P7]
Length = 711
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 197/378 (52%), Gaps = 72/378 (19%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E LK +G+DSF+ E Q+K I IL D F MPTGA G + + +
Sbjct: 3 EEAKVLLKKYYGYDSFR-EGQEKVINSIL-EEKDTFAIMPTGA----GKSICYQIPALLM 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDD-------KTSIVTGRSDLYQLE----LI 142
G + ISP++S ++ + D K S + D Y+L+ +
Sbjct: 57 KGITIV-----------ISPLIS--LMKDQVDALNDIGVKASFINSSLDQYELQERILMA 103
Query: 143 VSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAH 202
VSG TK LLYV PER +ESF L++ L ++ I +DE H
Sbjct: 104 VSGYTK------------------LLYVAPERLESESFCELIKTL----NISMIAIDECH 141
Query: 203 CVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTS 262
CVS+WGHDFRP+YR + L + + I A TATA VK+D++ +L K V+ T
Sbjct: 142 CVSQWGHDFRPSYRSIAPLIKKLDHRPIISAFTATATNEVKEDVVKLLGL-KESNVYTTG 200
Query: 263 TFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
R NL++ V+ + KD ++ +++E N + GIIY TR+ ++ ++L++
Sbjct: 201 FDRKNLYFSVVRGENKKD---YLLKYLE------NNRDQVGIIYAGTRKEVDNIYESLKK 251
Query: 323 K---VNKHE-------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
K V K+ R++ QE F+ +N+I AT +FGMGID+ NVR+V+H+ +P ++
Sbjct: 252 KGYSVGKYHAGMSDTARTKAQEDFLYDNVNIIVATNAFGMGIDKSNVRYVIHYNIPKNME 311
Query: 373 AYYQESGRAGRDGLQSYC 390
AYYQE+GRAGRDG S C
Sbjct: 312 AYYQEAGRAGRDGEPSEC 329
>gi|298675436|ref|YP_003727186.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
gi|298288424|gb|ADI74390.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
Length = 596
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 213/404 (52%), Gaps = 55/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG++ F+ QK I IL + D FV MPTG G + + + G +
Sbjct: 5 LHKYFGYEEFRSH-QKDIITDILDKK-DTFVVMPTGG----GKSLCYQLPALLMEGVTIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + RS+ + S E+ I +L
Sbjct: 59 -----------VSPLISLM-------KDQVDELRSNGISAACLNSTLGYQESNQICNDL- 99
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ RI +LY+TPER ++++ +L V N A +DEAHC+SEWG DFRP Y RL
Sbjct: 100 -LYNRIDVLYITPERLTMSKTLDFL--ESVNINLFA---IDEAHCISEWGQDFRPEYLRL 153
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L++ + IP+IALTATA P V+ D+IS+L+ + + + +S R NL+Y+V
Sbjct: 154 NMLKKKFPD-IPLIALTATATPRVQNDVISLLEL-EDCRRYISSFNRDNLYYEVRHK--- 208
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
KD+Y + ++ K ++ N GIIYC++R DL + L+++ +
Sbjct: 209 KDAYKQMVRYL-----KTHRKYN-GIIYCQSRRAVEDLYNKLKKEGFRVLPYHAGLPAKI 262
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R QESF+R ++ +I ATI+FGMGI++ NVRFV+H+ +P ++ YYQ++GR GRDGL
Sbjct: 263 REENQESFIRDDVQIIVATIAFGMGINKPNVRFVIHYDLPKNLENYYQQTGRGGRDGLDC 322
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
C ++ S + +EY I + +++ + ++ M++YCE
Sbjct: 323 DCILFFSYGDRYKIEYFI--NQKSRKSERDIALSKLNMMIDYCE 364
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/401 (34%), Positives = 208/401 (51%), Gaps = 45/401 (11%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 736 FGLKSFRPN-QLQVINATLL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 785
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELRLVK 162
ISP+ S + + + + +S +SG+ K + AI +L
Sbjct: 786 -------ISPLKSLIFDQINKLASLDICAKS--------LSGEQKMADVMAIYRDLESQP 830
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 831 PMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVL 890
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
++ N +P IALTATA P V+ DI++ L K K F +S RSNL Y ++ +
Sbjct: 891 KKRFPN-VPTIALTATATPRVRLDILAQLNL-KNCKWFLSSFNRSNLRY-MVLPKKGTST 947
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----RRKVNKH------ERSR 331
+ +I + A+ GIIYC +R+ + + + R V H ER
Sbjct: 948 LDDISRYI-----RSKPAHFSGIIYCLSRKECDETSKKMCKDGVRSVAYHAGLTDSEREG 1002
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
Q+ ++ G+I VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG + C
Sbjct: 1003 RQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVAECI 1062
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+Y++ L+ ++ +D + + ++ N ++ YCE
Sbjct: 1063 LYYNYADMLRLKKMMDSDKALQYNVKKIHVDNLYRIVGYCE 1103
>gi|421724743|ref|ZP_16163951.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
gi|410374417|gb|EKP29090.1| ATP-dependent DNA helicase RecQ [Klebsiella oxytoca M5al]
Length = 608
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ + I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QDTIIDTALAGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N L+ + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLTHWN-LSMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ + IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRIPH-IPFMALTATADDTTRRDIVRLLDLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 213/410 (51%), Gaps = 56/410 (13%)
Query: 42 ALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILN 101
A+FG DSF+ ++AI + ++ ++ V MPTG +S P + +
Sbjct: 439 AVFGNDSFRP--SQEAIINCVMSRNNALVLMPTGG---------GKSLCYQLPS--YFIK 485
Query: 102 GNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIV--SGQTKTENKAILEE- 157
G I+ ++S +D +++V TG +E I SG + E K +E
Sbjct: 486 G--------ITVVVSPLVSLIQDQVSNLVETG------MEAIAFYSGSSSEEAKQFYKES 531
Query: 158 -LRLVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
+ K IK ++VTPER ++SF L N +V+DEAHC+S+WGHDFR +Y
Sbjct: 532 YQKEGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSY 591
Query: 216 RRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
++L Q + G IPI+ LTATA VK DI+ L N+ VF S R NL Y
Sbjct: 592 QKLSVFSQEYPG--IPILMLTATATERVKNDILLSLGINEAV-VFSQSFNRKNLTY---- 644
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
++ V + IE+ + + K + GIIYC ++++T D+A L ++ +
Sbjct: 645 --CVRPKTKGVIDEIEEMIKRKYKGQS-GIIYCLSQKNTMDVAQELNKRGIKSKYYHAGM 701
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ ER++VQ+ + GE NVI ATI+FGMGID+ +VRFV+H +P S+ YYQESGRAGRD
Sbjct: 702 DTKERTKVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRD 761
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE--QLELKFKNYLSMLEYCE 432
G + C +Y++ K + E + D + ++ N ++ YCE
Sbjct: 762 GEPADCILYYNYRDKYTYERFFEKDKENNGDLSHIQTARNNLNEVISYCE 811
>gi|262163729|ref|ZP_06031469.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
gi|262027709|gb|EEY46374.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM223]
Length = 620
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L+ D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIDAALQGRDSLVIMPTGG----GKSLCYQIPALVCEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L +L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSNL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|86143313|ref|ZP_01061715.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
gi|85830218|gb|EAQ48678.1| ATP-dependent DNA helicase recQ [Leeuwenhoekiella blandensis
MED217]
Length = 704
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/375 (33%), Positives = 200/375 (53%), Gaps = 53/375 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ + L LK FG+DSF+ E + AI +L D V MPTG G + +
Sbjct: 5 IDKNTLLTTLKTYFGYDSFRNE--QSAIIETVLNGEDAIVIMPTGG----GKSICYQLPA 58
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ G + ISP+++ + K + + +D Y S Q+ +
Sbjct: 59 VLFEGLTLV-----------ISPLIALMKDQVDGLKANGIA--ADFYN-----SSQSAED 100
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+AI++++ +KLLYV PE L ++ ++ I +DEAHC+S WGHD
Sbjct: 101 QQAIIDQV--ANRDLKLLYVAPESLAG------LNPILNKTYISCIAIDEAHCISSWGHD 152
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP+Y++LG L++ + IP+IALTATA+ + ++DI + L + K F +S R N+
Sbjct: 153 FRPSYQQLGFLKK-SLPQIPMIALTATADKATREDIANQLNISHA-KQFISSFDRKNITL 210
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK---- 326
+V D D +K F+EK + + GIIYC +R+ T ++ +L + K
Sbjct: 211 EVRAADKRLD---QIKRFLEK------RPDTSGIIYCLSRKTTESVSTSLAAEGIKATCY 261
Query: 327 ------HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
ER++VQE F+ + V+ AT++FGMGID+ NVR+V+H+ MP ++ YYQE GR
Sbjct: 262 HAGLSFDERNKVQEDFIYDKTQVVCATVAFGMGIDKSNVRWVIHYNMPKNLEGYYQEIGR 321
Query: 381 AGRDGLQSYCRIYHS 395
AGRDGL+S+ ++HS
Sbjct: 322 AGRDGLKSHALLFHS 336
>gi|288575145|ref|ZP_06393502.1| ATP-dependent DNA helicase RecQ [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570886|gb|EFC92443.1| ATP-dependent DNA helicase RecQ [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 603
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 141/405 (34%), Positives = 199/405 (49%), Gaps = 55/405 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK LFG+D F+ Q AI H++ D V MPTG + + A R PG +
Sbjct: 9 LKRLFGYDEFRLN-QGDAIDHVM-GGGDCLVLMPTGGGKSLCYQIPAILR----PGIGVV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTENKAILEEL 158
ISP+++ + D +V +G Y T + +
Sbjct: 63 -----------ISPLIALMH----DQVNGLVQSGVRAAYM------NSTMNYEEFVQVSR 101
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
++ + LLYV PERA+ SF L + L+ I +DEAHCVS+WGHDFRP Y RL
Sbjct: 102 AAMRGELDLLYVAPERAMKPSFMDFLSRI----SLSVIAIDEAHCVSQWGHDFRPEYLRL 157
Query: 219 GEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
GEL R F +P IA+TATA+ +++I+S L N KVF + R N+ Y V+ +
Sbjct: 158 GELGRAFP--EVPRIAVTATADELTRKEILSRLDLNGG-KVFVSGFDRPNIRYQVVMKEK 214
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
K + +F+ + + N+ GI+YC TR T +A LR +
Sbjct: 215 PK---KQLLDFLRR-----SHRNDSGIVYCMTRRKTESIAQWLRDNGIKALSYHGGMGAE 266
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER VQE F E V+ ATI+FGMGID+ +VRFV H MP S+ AYYQE+GRAGRDGL
Sbjct: 267 ERRTVQERFQDEEAVVVVATIAFGMGIDKPDVRFVAHLDMPKSLAAYYQETGRAGRDGLP 326
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ + + +I+ +R + + +N ML YCE
Sbjct: 327 ADAWMTYGMADVTGQLKLIEMSEGDERYK-RISRQNLEIMLGYCE 370
>gi|283780735|ref|YP_003371490.1| RecQ familyATP-dependent DNA helicase [Pirellula staleyi DSM 6068]
gi|283439188|gb|ADB17630.1| ATP-dependent DNA helicase, RecQ family [Pirellula staleyi DSM
6068]
Length = 921
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 190/387 (49%), Gaps = 59/387 (15%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ ++A+ +L D MPTG G
Sbjct: 18 FGLSSFRP--GQRAVIEAVLSGQDCLCIMPTGG------------------GKSLCYQLP 57
Query: 104 VRSRNGW---ISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
+R G +SP+++ ++ + D S + RS L S Q + N +
Sbjct: 58 AIARGGLTLVVSPLIA--LMKDQVDSLSAIGIRSTCINSSLSPSEQRERMNL-------M 108
Query: 161 VKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGE 220
L+Y+ PER F L+ L + K+ + VDEAHC+SEWGHDFRP Y RLG+
Sbjct: 109 AAGGYNLVYIAPERLRNSQF---LEKL-KSTKVGLLAVDEAHCISEWGHDFRPDYARLGK 164
Query: 221 LRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKD 280
LR+ G S IALTATA P V+ D+ L+ +P +VF T R NL ++V ++
Sbjct: 165 LRERIG-SPQTIALTATATPRVRDDVAKQLQLREP-QVFITGFARPNLHFEVWHASKEQE 222
Query: 281 SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL-------ADALRRKV-------NK 326
+ EF+E G CGI+Y TR+ +L D +RKV +
Sbjct: 223 KQTLLLEFLESTPG-------CGIVYAATRKRCEELHLLLSQHLDQKQRKVGLYHAGLSA 275
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R VQ+ FM G + +I AT +FGMGID+ ++RFVVH+ MP S+ AYYQE+GRAGRDGL
Sbjct: 276 DDRRLVQDEFMSGRMPIIVATNAFGMGIDKSDLRFVVHYNMPGSLEAYYQEAGRAGRDGL 335
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTK 413
+S C + S ++ E+ I + K
Sbjct: 336 RSRCLLLASHGDRRIQEFFIDSSYPPK 362
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 197/410 (48%), Gaps = 57/410 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK FGF SF+ LQ++ I L D+F +PTG G + + + P
Sbjct: 11 QLLPTLKQYFGFSSFR-PLQEEIILDTLA-GKDVFALLPTGG----GKSLCFQLPALVRP 64
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT--GRSDLYQLELIVSGQTKTENK 152
G + ISP+++ D+ +T G + + +G++ +
Sbjct: 65 GLTVV-----------ISPLIA-----LMKDQVDALTASGAPATFLNSSLEAGESTPRLR 108
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
L K +LLYV PER + F L+ L R+N + +DEAHCVSEWGHDFR
Sbjct: 109 G------LHKGEFRLLYVAPERLMLSGF---LEDLRRWN-VNLFAIDEAHCVSEWGHDFR 158
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR + +LR+ +P +ALTATA V++DII L +P ++F S R NL Y V
Sbjct: 159 PEYRAISKLRELF-PEVPFMALTATATERVREDIIRALSLREP-QIFVASFNRPNLTYRV 216
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+Y FI + GI+YC +R+ +A L
Sbjct: 217 ---HAKSGAYEQTLSFIRA------RPRESGIVYCHSRKTAESVAQKLNEDGVSARPYHA 267
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ERSR QE F+R E+ V+ ATI+FGMGI++ NVRFV+H+ +P ++ YYQE+GRAG
Sbjct: 268 GLPGEERSRNQELFLRDEVRVVCATIAFGMGINKPNVRFVIHYDLPKNVEGYYQETGRAG 327
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDGL S C + S I T +QL + M+ Y E
Sbjct: 328 RDGLPSECLLLFSPGDVVKQTGFINEKTDPHEQQLAR--EQLQQMVHYAE 375
>gi|258620546|ref|ZP_05715583.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
gi|258587061|gb|EEW11773.1| ATP-dependent DNA helicase RecQ [Vibrio mimicus VM573]
Length = 620
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 201/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L+ D V MPTG + + A R G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALQGRDSLVIMPTGGGKSLCYQIPALVR----EGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTFAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L +L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSNL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N IP++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-IPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 147/415 (35%), Positives = 210/415 (50%), Gaps = 48/415 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L L FG F+ Q +AI L H FV MPTG SL + S
Sbjct: 505 QDLRTALLHRFGLRGFRPG-QLEAINTTLSGDH-CFVLMPTGGGKSLCYQLPS------- 555
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
I +G R +SP+LS +D+ R + Q LI T +
Sbjct: 556 -----VIASGKTRGVTIVVSPLLS-----LMEDQVDACRNRFGM-QAFLINGESTAAQKN 604
Query: 153 AILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I++ LR P+ I++LYVTPE + + Q L LA IV+DEAHCVS+WGH
Sbjct: 605 MIMDALRQRDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGH 664
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG++ RQF G +P+IALTATA V+ D+++ L + + S R NL
Sbjct: 665 DFRPDYKALGDVVRQFPG--VPVIALTATATQLVRTDVVANLGIQG-CRQYSQSFNRPNL 721
Query: 269 FYDVIFDDL-LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---- 323
Y+V+ + DS A + EK GK GIIYC +R+ +A L
Sbjct: 722 SYEVLPKGRGVIDSIADL--IKEKYTGK------SGIIYCLSRKTCEQVAQKLSETGIRA 773
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +RS VQ + + E +VI ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 774 YHYHAGMDSADRSDVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQE 833
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +Y+ + L +I + REQ + ++++YCE
Sbjct: 834 TGRAGRDGKRSECYLYYLYADSRILRKMIDEGEGS-REQKQRLNDMLRTVVQYCE 887
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 210/415 (50%), Gaps = 48/415 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L L FG F+ Q + I L H FV MPTG SL + S
Sbjct: 850 QDLRTALIRRFGLRGFRPG-QLETINTTLAGDH-CFVLMPTGGGKSLCYQLPS------- 900
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
I +G +SP+LS +D+ R + Q LI T + K
Sbjct: 901 -----VIASGKTHGVTLVVSPLLS-----LMEDQVEACRQRFGM-QAFLINGESTAAQKK 949
Query: 153 AILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I++ LR P+ I++LYVTPE + + Q L LA IV+DEAHCVS+WGH
Sbjct: 950 MIMDGLRERDPQQFIQILYVTPEMLSKNQRMINAFQQLHSGGNLARIVIDEAHCVSQWGH 1009
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG++ RQF G +P++ALTATA V+ D++S L + F S R NL
Sbjct: 1010 DFRPDYKALGDVVRQFPG--VPVLALTATATKLVRSDVVSNLGIQG-CREFSQSFNRPNL 1066
Query: 269 FYDVIFDDLLKDSYAHVKEFI-EKCLGKDNKANNCGIIYCRTREHTTDLADALRR----- 322
Y+V+ K ++ + I E+ +GK GIIYC +R+ +A L
Sbjct: 1067 SYEVL--PKAKGIINNIADLIKERYVGK------SGIIYCLSRKSCEQVAQKLSEMGIRA 1118
Query: 323 -----KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +RS VQ + + E +VI ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 1119 YHYHAGMDSADRSDVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQE 1178
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +Y+ + L +I + REQ + ++++YCE
Sbjct: 1179 TGRAGRDGKRSECYLYYQYADSRILRKMIDEGEGS-REQKQRLSDMLRTVIQYCE 1232
>gi|440296127|gb|ELP88968.1| ATP-dependent DNA helicase recQ, putative [Entamoeba invadens IP1]
Length = 517
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 148/253 (58%), Gaps = 20/253 (7%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S TK+E +L L P + LLYVTPE+ T+ F ++ L K+ +DEAHC
Sbjct: 107 SSLTKSEASRVLAILNSTSPELYLLYVTPEQIKTQRFQNIMNKLNDNGKIGLFAIDEAHC 166
Query: 204 VSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTST 263
+S+WGHDFRP+Y L L+Q T IP+IALTATA VK DII L P +F TST
Sbjct: 167 ISQWGHDFRPSYLELSYLKQ-TFPQIPVIALTATATEKVKDDIIKALGLKDP-NIF-TST 223
Query: 264 F-RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
F R N+++ V++ DL Y + +E + K L + + GI+YC TR L L+
Sbjct: 224 FDRPNIYFRVLYKDL----YENPQEELLKYLTQHQQEG--GIVYCSTRNECELLEKYLKS 277
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
K ++ +R VQ+ + R E ++ AT++FGMGIDR +VRFVVHW +P +I
Sbjct: 278 KGFRVGKYHAGMSASDRESVQKMWERKETGIVIATVAFGMGIDRSDVRFVVHWNIPKNIE 337
Query: 373 AYYQESGRAGRDG 385
+ QE+GRAGRDG
Sbjct: 338 GFIQEAGRAGRDG 350
>gi|238793565|ref|ZP_04637189.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
gi|238727155|gb|EEQ18685.1| ATP-dependent DNA helicase recQ [Yersinia intermedia ATCC 29909]
Length = 610
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 212/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 17 LRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 71 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --SGQIKLLYIAPERLVMESF---LDQLYQW-RPALLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 167 QLKQRFPD-LPVIALTATADEATRGDIVRLLNLDQP--LIQISSFDRPNIRYTLVEKFKP 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 224 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R +VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 270 LDNERRGQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 330 DGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|22124312|ref|NP_667735.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM10+]
gi|45442967|ref|NP_994506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Microtus
str. 91001]
gi|51594557|ref|YP_068748.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
32953]
gi|108806187|ref|YP_650103.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|108810297|ref|YP_646064.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|145600700|ref|YP_001164776.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|153947607|ref|YP_001399215.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|153997111|ref|ZP_02022244.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|162418857|ref|YP_001605148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165926240|ref|ZP_02222072.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939115|ref|ZP_02227666.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011675|ref|ZP_02232573.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213635|ref|ZP_02239670.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167401854|ref|ZP_02307342.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167421077|ref|ZP_02312830.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167426281|ref|ZP_02318034.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167469646|ref|ZP_02334350.1| ATP-dependent DNA helicase RecQ [Yersinia pestis FV-1]
gi|218930836|ref|YP_002348711.1| ATP-dependent DNA helicase RecQ [Yersinia pestis CO92]
gi|229837162|ref|ZP_04457327.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|229839522|ref|ZP_04459681.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229900085|ref|ZP_04515222.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229900469|ref|ZP_04515598.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|270488824|ref|ZP_06205898.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294505497|ref|YP_003569559.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|384123966|ref|YP_005506586.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|384127827|ref|YP_005510441.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|384138308|ref|YP_005521010.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|384413065|ref|YP_005622427.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420549046|ref|ZP_15046797.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|420554379|ref|ZP_15051553.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|420560006|ref|ZP_15056434.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|420565382|ref|ZP_15061272.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|420581390|ref|ZP_15075799.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|420586787|ref|ZP_15080681.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|420591869|ref|ZP_15085252.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|420597248|ref|ZP_15090090.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|420602944|ref|ZP_15095145.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|420608335|ref|ZP_15100039.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|420613725|ref|ZP_15104865.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|420619086|ref|ZP_15109540.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|420624397|ref|ZP_15114328.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|420629378|ref|ZP_15118846.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|420639815|ref|ZP_15128223.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|420645253|ref|ZP_15133196.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|420650581|ref|ZP_15137995.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|420661646|ref|ZP_15147913.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|420666997|ref|ZP_15152736.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|420671856|ref|ZP_15157169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|420682761|ref|ZP_15167043.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|420688171|ref|ZP_15171857.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|420693441|ref|ZP_15176465.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|420699163|ref|ZP_15181511.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|420705063|ref|ZP_15186161.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|420710327|ref|ZP_15190893.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|420721372|ref|ZP_15200506.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|420726804|ref|ZP_15205306.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|420732302|ref|ZP_15210251.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|420737293|ref|ZP_15214760.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|420742774|ref|ZP_15219685.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|420753919|ref|ZP_15229361.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|420765089|ref|ZP_15238752.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|420780906|ref|ZP_15252870.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|420797138|ref|ZP_15267335.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|420802233|ref|ZP_15271911.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|420812973|ref|ZP_15281585.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|420818445|ref|ZP_15286557.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|420823785|ref|ZP_15291325.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|420828848|ref|ZP_15295891.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|420834430|ref|ZP_15300927.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|420839377|ref|ZP_15305399.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|420844579|ref|ZP_15310118.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|420850225|ref|ZP_15315189.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|420855965|ref|ZP_15320020.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|420861052|ref|ZP_15324517.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|421765358|ref|ZP_16202143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
gi|21957085|gb|AAM83986.1|AE013640_5 ATP-dependent DNA helicase [Yersinia pestis KIM10+]
gi|45437834|gb|AAS63383.1| ATP-dependent DNA helicase [Yersinia pestis biovar Microtus str.
91001]
gi|51587839|emb|CAH19442.1| ATP-dependent DNA helicase [Yersinia pseudotuberculosis IP 32953]
gi|108773945|gb|ABG16464.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Nepal516]
gi|108778100|gb|ABG12158.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Antiqua]
gi|115349447|emb|CAL22420.1| ATP-dependent DNA helicase [Yersinia pestis CO92]
gi|145212396|gb|ABP41803.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Pestoides F]
gi|149289417|gb|EDM39495.1| ATP-dependent DNA helicase [Yersinia pestis CA88-4125]
gi|152959102|gb|ABS46563.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis IP
31758]
gi|162351672|gb|ABX85620.1| ATP-dependent DNA helicase RecQ [Yersinia pestis Angola]
gi|165912888|gb|EDR31514.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. IP275]
gi|165921764|gb|EDR38961.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989444|gb|EDR41745.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205308|gb|EDR49788.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961206|gb|EDR57227.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048747|gb|EDR60155.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054800|gb|EDR64604.1| ATP-dependent DNA helicase RecQ [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229682488|gb|EEO78575.1| ATP-dependent DNA helicase [Yersinia pestis Nepal516]
gi|229686865|gb|EEO78944.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695888|gb|EEO85935.1| ATP-dependent DNA helicase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229706105|gb|EEO92114.1| ATP-dependent DNA helicase [Yersinia pestis Pestoides A]
gi|262363562|gb|ACY60283.1| ATP-dependent DNA helicase [Yersinia pestis D106004]
gi|262367491|gb|ACY64048.1| ATP-dependent DNA helicase [Yersinia pestis D182038]
gi|270337328|gb|EFA48105.1| ATP-dependent DNA helicase RecQ [Yersinia pestis KIM D27]
gi|294355956|gb|ADE66297.1| ATP-dependent DNA helicase [Yersinia pestis Z176003]
gi|320013569|gb|ADV97140.1| ATP-dependent DNA helicase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342853437|gb|AEL71990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis A1122]
gi|391421158|gb|EIQ83878.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-01]
gi|391421371|gb|EIQ84073.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-02]
gi|391421448|gb|EIQ84143.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-03]
gi|391436188|gb|EIQ97169.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-04]
gi|391453252|gb|EIR12582.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-07]
gi|391453411|gb|EIR12729.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-08]
gi|391455260|gb|EIR14393.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-09]
gi|391469060|gb|EIR26879.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-10]
gi|391469818|gb|EIR27555.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-11]
gi|391471272|gb|EIR28850.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-12]
gi|391484954|gb|EIR41152.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-13]
gi|391486455|gb|EIR42485.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-15]
gi|391486548|gb|EIR42569.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-14]
gi|391501084|gb|EIR55520.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-16]
gi|391506158|gb|EIR60104.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-25]
gi|391517115|gb|EIR69950.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-29]
gi|391518917|gb|EIR71596.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-32]
gi|391531438|gb|EIR82932.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-36]
gi|391534305|gb|EIR85494.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-42]
gi|391536661|gb|EIR87623.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-45]
gi|391550077|gb|EIR99727.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-47]
gi|391550347|gb|EIR99969.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-48]
gi|391564613|gb|EIS12805.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-52]
gi|391566044|gb|EIS14081.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-53]
gi|391569386|gb|EIS16980.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-54]
gi|391579599|gb|EIS25700.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-55]
gi|391591637|gb|EIS36175.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-58]
gi|391595137|gb|EIS39212.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-60]
gi|391595868|gb|EIS39867.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-59]
gi|391609696|gb|EIS52066.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-61]
gi|391610048|gb|EIS52385.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-63]
gi|391623135|gb|EIS63973.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-65]
gi|391633409|gb|EIS72815.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-71]
gi|391648413|gb|EIS85930.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-88]
gi|391666018|gb|EIT01535.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-91]
gi|391675612|gb|EIT10109.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-92]
gi|391675850|gb|EIT10329.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-94]
gi|391689548|gb|EIT22669.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-95]
gi|391691498|gb|EIT24422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-96]
gi|391693223|gb|EIT25990.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-98]
gi|391706602|gb|EIT38024.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-99]
gi|391707573|gb|EIT38908.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-100]
gi|391710357|gb|EIT41433.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-101]
gi|391722570|gb|EIT52360.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-102]
gi|391722697|gb|EIT52473.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-103]
gi|391723511|gb|EIT53184.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-113]
gi|411173338|gb|EKS43383.1| ATP-dependent DNA helicase RecQ [Yersinia pestis INS]
Length = 610
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 213/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 17 LRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 71 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --SGQIKLLYIAPERLVMESF---LDQLYQW-RPALLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 167 QLKQRFPD-LPVIALTATADEATRGDIVRLLNLDQP--LIQISSFDRPNIRYTLVEKFKP 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 224 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 270 LDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 330 DGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|161486585|ref|NP_935980.2| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 611
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 208/397 (52%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ +F+ E Q+ I + D V MPTG + + A R PG +
Sbjct: 20 LSQVFGYQTFR-EGQQSVIE-AAVEGKDSLVIMPTGGGKSLCYQIPALVR----PGITLV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S ++ ++ R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLSRDALLSVYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KL+YV+PER + F L++L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHAGQLKLVYVSPERVLMRDFIERLENL----PLAMIAVDEAHCISQWGHDFRPEYAALG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+ + +P +ALTATA+ + ++DI+S L N+P+ V+ S R N+ YD++
Sbjct: 170 QLKHHFPH-VPFMALTATADDATRKDILSRLHLNEPH-VYLGSFDRPNIRYDLV------ 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I +++ NCGIIYC +R+ L + L ++ ER
Sbjct: 222 EKHKPVSQVIRYL---ESQKGNCGIIYCGSRKKVEMLTEKLCNNHIRAAGYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R +I ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + L ++ ++Q+E N +S
Sbjct: 339 AMMLYDPADITWLRRMLDEKDDGPQKQVESHKLNAMS 375
>gi|395804511|ref|ZP_10483749.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395433398|gb|EJF99353.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 768
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 191/372 (51%), Gaps = 57/372 (15%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L A LK FGF+ F+ ++ I + +L D MPTG G + + I PG
Sbjct: 6 LHATLKENFGFEKFRP--NQETIINTILSGQDALAIMPTGG----GKSICFQLPALILPG 59
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENKAI 154
+ ISP+++ +D S+ T G S Y I S Q+ E +
Sbjct: 60 ITIV-----------ISPLIA----LMKDQVDSLKTNGISACY----INSTQSSQEQQYY 100
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ L+ KL+YV PE S YL N ++ I +DEAHC+S WGHDFRP
Sbjct: 101 IDNLK--SNHFKLVYVAPE-----SLSYLDMAFSELN-ISLIAIDEAHCISSWGHDFRPA 152
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y LG L+ +F S PI+ALTATA+ + + DI L P K F S R NL +V
Sbjct: 153 YTNLGYLKSRFP--STPILALTATADKATRTDISKQLNLKNP-KTFIASFDRKNLSLEV- 208
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
+ + VK+ I+ +NK N GIIYC +R+ T +LA+ LR+
Sbjct: 209 -----RPALDRVKQIIDFI---ENKPNESGIIYCLSRKATEELAEKLRKNGIEAKAYHAG 260
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++ Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P +I YYQE GRAGR
Sbjct: 261 LDNETRAKTQDQFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGR 320
Query: 384 DGLQSYCRIYHS 395
DGL + ++ S
Sbjct: 321 DGLPAETVLFES 332
>gi|427727826|ref|YP_007074063.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
gi|427363745|gb|AFY46466.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
Length = 718
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 207/412 (50%), Gaps = 59/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LEQALKYHFGYDQFRP--GQRQIIEDALQNRDLLVVMPTGG----GKSLCFQLPALMKSG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ +SP+++ LR + + + + YQ+ ++
Sbjct: 61 LTVV-----------VSPLIALMQDQVEALRNNNISATFLNSSLNPYQV--------RSR 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
AIL +++LLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 102 EDAIL------NGKVRLLYVAPERLLSERFLPFLDLVHEKIGISIFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L LR+ N +P++ALTATA V+ DII L +P + S R NL+Y
Sbjct: 156 FRPEYRQLKSLRKRYPN-VPMLALTATATDRVRADIIQQLGLKQP-SIHIASFNRQNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K +YA + E I G IIYC TR+ +L L+
Sbjct: 214 EVRAKS--KQAYAELLELIRDTEG-------SVIIYCLTRKKVEELTFKLQNDKIAVLPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ERS+ Q F+R ++ V+ ATI+FGMGI++ +VR VVH+ +P ++ +YYQESGR
Sbjct: 265 HAGLPDAERSQNQTRFIRDDVRVMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG S C I+ S K++E+ I+ T + EQL + + M++Y E
Sbjct: 325 AGRDGEPSRCTIFFSFADIKTIEWSIEQKTEPQ-EQL-IARQQLRQMIDYAE 374
>gi|395218411|ref|ZP_10402063.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394454486|gb|EJF09132.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 624
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 212/396 (53%), Gaps = 52/396 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E LK FG++ F+ +Q+ I +IL + D+ V MPTG G V + +
Sbjct: 6 REAREALKLYFGYEQFR-PMQEHIITNIL-QQKDVVVLMPTGG----GKSVCYQVPAVVM 59
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + +SP+++ L + + G Y + S QT E
Sbjct: 60 PGLCVV-----------VSPLIA---LMKDQVEALLANGIPAAY----LNSSQTADEQYQ 101
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I E + + +IKLLYV+PE+ ++ F L+ L +++ VDEAHC+S WGHDFRP
Sbjct: 102 IEE--KSLAGQIKLLYVSPEKLLSAGFFSFLKRL----QVSLFAVDEAHCISAWGHDFRP 155
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y +L L+Q ++P++ALTATA+ ++DI L+ +P +VF S R N+ V+
Sbjct: 156 EYTQLRALKQ-QFPAVPVVALTATADKLTQKDIQEQLQLRQP-EVFVASFDRPNINLMVL 213
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
++ + + +F+ + G+ GIIYC +R+ T LA LR
Sbjct: 214 PG---QNRFNKITDFLSRRHGQP------GIIYCLSRKATESLAGKLRENGYNATFYHAG 264
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +RS+ QESF+R ++ ++ ATI+FGMGID+ NVR+V+H+ +P ++ YYQE GRAGR
Sbjct: 265 MSAQQRSKAQESFLRDDVLIVCATIAFGMGIDKSNVRWVIHYNLPKNVEGYYQEIGRAGR 324
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLEL 419
DG +S +++S +L ++ +D + +L+L
Sbjct: 325 DGAKSDALLFYSFADVMNLRTML-SDNDKSQNELQL 359
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 187/375 (49%), Gaps = 51/375 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+S + L A LK FG+DSF+ LQ++ I L D+F +PTG
Sbjct: 2 ISSRSLLATLKQTFGYDSFR-PLQEEIITDALA-GRDVFALLPTGG-------------- 45
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
G R+G ++ ++S +D ++ L + G E
Sbjct: 46 ----GKSLCFQLPALLRDG-LTVVVSPLIALMKDQVDALTATGVPATFLNSTLDGD---E 97
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+A L + +LLY PER + F + +L +N + I +DEAHC+SEWGHD
Sbjct: 98 ARARFRGLH--RGEFRLLYAAPERLMLPGF---VDNLRAWN-VTQIAIDEAHCISEWGHD 151
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L +LR+ T +P++ALTATA V+ DII L+ P + + S R NL Y
Sbjct: 152 FRPEYRQLADLRE-TLPDVPMMALTATATERVRADIIERLRLRDP-RCYTASFNRPNLTY 209
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---------- 320
V+ Y V F+ ++ GIIYC +R+ T +A+ L
Sbjct: 210 RVV---PRAQPYDQVLAFLR------SRPGESGIIYCSSRKATESVAERLADDRISAKPY 260
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ ER R QE F+R E+ VI ATI+FGMGI++ NVRFV+H+ +P +I YYQE+GR
Sbjct: 261 HAGLTAEERGRHQELFLRDEVRVICATIAFGMGINKPNVRFVLHYDLPKNIEGYYQETGR 320
Query: 381 AGRDGLQSYCRIYHS 395
AGRDGL C + S
Sbjct: 321 AGRDGLPGECVLLFS 335
>gi|392553532|ref|ZP_10300669.1| ATP-dependent DNA helicase [Pseudoalteromonas spongiae
UST010723-006]
Length = 607
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 51/373 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ +Q + L ++FG+ F+ Q++ I +L D V MPTG G + +
Sbjct: 11 MQQQTPHSVLSSVFGYKQFRAG-QEQVIDAVLA-GQDCLVLMPTGG----GKSLCYQVPA 64
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ PG + +SP++S + K V I + Q++ E
Sbjct: 65 LLLPGITIV-----------VSPLISLMQDQVAQLKAQGVAA-------AYINNSQSREE 106
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ I + L + +IK+LYV PER +T+ F LQHL + +DEAHCVS WGHD
Sbjct: 107 QQLIYQGLH--QGQIKILYVAPERLLTDDFSTRLQHL----NIGLFAIDEAHCVSHWGHD 160
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y RLG+L+Q + IPI+ALTATA+ + + DI+ L + ++ S R N+ Y
Sbjct: 161 FRPHYYRLGQLKQ-RFSHIPIMALTATADIATRNDIVMQLGLTNAH-IYTGSFDRPNIRY 218
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---------- 320
+ ++ K + + F+++ G+ GIIYC +R+ D+A+ L
Sbjct: 219 TI--EEKFK-PLSQLMRFLKEQKGQ------SGIIYCSSRKRVDDIAEKLVDAGYNAASY 269
Query: 321 RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
+ +RS VQ +F R +I+++ AT++FGMGI++ NVRFV+H+ +P +I +YYQE+GR
Sbjct: 270 HAGLENEQRSFVQNAFARDDIHIVVATVAFGMGINKPNVRFVIHYDIPKNIESYYQETGR 329
Query: 381 AGRDGLQSYCRIY 393
AGRDGL + +Y
Sbjct: 330 AGRDGLSAEAIMY 342
>gi|417843805|ref|ZP_12489870.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
gi|341948268|gb|EGT74898.1| ATP-dependent DNA helicase recQ [Haemophilus haemolyticus M21127]
Length = 619
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 161/270 (59%), Gaps = 25/270 (9%)
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+L+ ++KLLYV+PE+ +T SF L+ Y+K+++I +DEAHC+S+WGHDFRP Y +L
Sbjct: 113 KLISGQLKLLYVSPEKVMTNSFF----QLISYSKVSFIAIDEAHCISQWGHDFRPEYTQL 168
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G L+ ++ PI+ALTATA+ + +QDI++ L P+K + S R N+ Y L
Sbjct: 169 GGLKASFPHA-PIMALTATADYATRQDILTHLNLENPHK-YIGSFDRPNIRYT------L 220
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
++ Y +++ L + K+ GIIYC +R +A++LR K +
Sbjct: 221 EEKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAL 277
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ + SI +YYQE+GRAGRD L +
Sbjct: 278 RERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLSRSIESYYQETGRAGRDDLPA 337
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 338 EAVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 204/406 (50%), Gaps = 54/406 (13%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVRIPPGADFI 99
FG SF+ Q +AI LL D F+ MPTG + + VSA V I P I
Sbjct: 393 FGLHSFRTN-QLEAINAALL-GEDCFILMPTGGGKSLCYQLPACVSAGVTVVISPLRSLI 450
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++ + L+ D + +TG D+ T + +L
Sbjct: 451 IDQVQK--------------LKTLDIAATYLTG--DI----------TDADASKTYMQLS 484
Query: 160 LVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
P IKLLYVTPE+ + L++L LA V+DEAHCVS+WGHDFR Y+RL
Sbjct: 485 KKDPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHDFRKDYKRL 544
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR+ +S+P++ALTATA P V++DI + L+ KP +VF S R NL YDV+
Sbjct: 545 NMLRK-KFHSVPMMALTATANPRVQKDIQNQLEMLKP-QVFTMSFNRHNLKYDVLPKKPK 602
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-----------VNKH 327
K + + E+I+K D+ GIIYC +R H D A+ +K +
Sbjct: 603 KVAMDCL-EWIKKYHPHDS-----GIIYCLSR-HECDTTAAILQKEGLAALAYHAGLTDS 655
Query: 328 ERSRVQESFMRGE-INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
R VQ+ ++ E VI ATI+FGMGID+ +VR+V+H +P S+ YY ESGRAGRDG
Sbjct: 656 NRDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYHESGRAGRDGE 715
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S+C +++S L +I + + F N SM+ YCE
Sbjct: 716 MSHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCE 761
>gi|189466850|ref|ZP_03015635.1| hypothetical protein BACINT_03226 [Bacteroides intestinalis DSM
17393]
gi|189435114|gb|EDV04099.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 602
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 212/403 (52%), Gaps = 54/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ++ IR +L D V MPTG G + + + G +
Sbjct: 5 LKRYFGYDSFR-PLQEEIIRTVL-DGRDSLVLMPTGG----GKSICYQLPALLCEGTAVV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S +D S+ L S +TEN A+L
Sbjct: 59 -----------VSPLIS----LMKDQVESLCANGVAAGALN---SSNDETEN-AVLRRA- 98
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
++ +KLLY++PE+ + E+ +YLL+ + ++ +DEAHC+S+WGHDFRP Y ++G
Sbjct: 99 CMEGSLKLLYISPEKLIAEA-NYLLRDM----HISLFAIDEAHCISQWGHDFRPEYAQMG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+R+ N IP+IALTATA+ ++DI+ L N+P KVF +S R NL V K
Sbjct: 154 FIREMFPN-IPVIALTATADKITREDIVRQLHLNQP-KVFISSFDRPNLSLTVKRGYQQK 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ + +FI + G+ GIIYC +R T +A L+++ ++ R
Sbjct: 212 EKSKAILDFIGRHRGES------GIIYCMSRSKTETVAQMLQKQGLRVAVYHAGLSSVRR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
Q+ F+ + ++ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 266 DEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSD 325
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 TLLFYS-----LADLILLTKFATESGQQGINLEKLQRMQQYAE 363
>gi|282880882|ref|ZP_06289575.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
gi|281305264|gb|EFA97331.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
Length = 725
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 49/379 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT KLK FGFDSFK E Q+ I H LL + FV MPTG G + + + G
Sbjct: 7 LTEKLKLYFGFDSFKGE-QEAIINH-LLAGNSAFVLMPTGG----GKSLCYQLPSLLMEG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKTENKAI 154
+ +SP+++ ++ ++ G S+ + + S K + +
Sbjct: 61 TAIV-----------VSPLIA-----LMKNQVDVINGISEEEGVAHFLNSSLNKAAIQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++++R R KLLYV PE E + + K+++ +DEAHC+SEWGHDFRP
Sbjct: 105 MDDVR--AGRTKLLYVAPESLNKEENIEFFKTV----KISFYAIDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR + G++ P+IALTATA V+ DI L + FK+S R NL+Y++
Sbjct: 159 YRNIRPTINKIGDA-PVIALTATATDKVRTDIKRSLGIADA-REFKSSFNRPNLYYEI-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
D + FI + GK GIIYC +R+ +L++ L+ +
Sbjct: 215 RQKSSDIDKQIIMFIRQHEGK------SGIIYCLSRKKVEELSEVLKANNIKAAPYHAGL 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRAGRD
Sbjct: 269 DSVTRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++++ K LE
Sbjct: 329 GGEGICIAFYAQKDLKKLE 347
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 209/401 (52%), Gaps = 45/401 (11%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 703 FGLKSFRPN-QLQVINATLL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 752
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN-KAILEELRLVK 162
ISP+ S + + + + +S +SG+ K + AI +L
Sbjct: 753 -------ISPLKSLIFDQINKLASLDICAKS--------LSGEQKMADVMAIYRDLESQP 797
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 798 PMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVL 857
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDS 281
++ N +P IALTATA P V+ DI++ L K K F +S RSNL Y V L
Sbjct: 858 KKRFPN-VPTIALTATATPRVRLDILAQLNL-KNCKWFLSSFNRSNLRYRV-----LPKK 910
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----RRKVNKH------ERSR 331
A + I + + + A+ GIIYC +R+ + + + R V H ER
Sbjct: 911 GASTLDDISRYI-RSKPAHFSGIIYCLSRKECDETSKRMCKDGVRAVAYHAGLTDTEREG 969
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
Q+ ++ G+I VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG + C
Sbjct: 970 RQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCI 1029
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+Y++ ++ ++ +D + + ++ N ++ YCE
Sbjct: 1030 LYYNYADMLRIKKMMDSDKALQYNVKKIHVDNLYRIVGYCE 1070
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 205/393 (52%), Gaps = 48/393 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK FG+D F+ ++ I L+ D+ + MPTG G + + + P
Sbjct: 6 KLEQALKYHFGYDQFRPG--QRQIIEDALQNRDLLIIMPTGG----GKSLCFQLPALLKP 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + +SP+++ + +T+ + S + + + + ++ +A+
Sbjct: 60 GLTVV-----------VSPLIALMQDQVEALRTNNI---SATFLNSSLNAFKVRSREEAL 105
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
L+ +IKLLYV PER ++E F LL + ++ +DEAHCVSEWGHDFRP
Sbjct: 106 LQG------KIKLLYVAPERLLSERFLPLLDLVKEKIGISTFAIDEAHCVSEWGHDFRPE 159
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YR++ LR+ + +P +ALTATA V+ DII L +P + S R NL+Y+V
Sbjct: 160 YRQMKSLRKRYPD-VPTLALTATATDRVRADIIQQLGLKQP-SIHIASFNRQNLYYEVRT 217
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
K +YA + LG + GIIYC TR+ +L L+ +
Sbjct: 218 KT--KTAYAEL-------LGIIRENQGSGIIYCLTRKKVDELTLKLQHDKISVLSYHAGL 268
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
ERS+ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ +YYQESGRAGRD
Sbjct: 269 TDDERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRD 328
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQL 417
S C ++ S K++E+ I T + EQL
Sbjct: 329 DEPSRCTLFFSFSDIKTIEWSINQKTDPQ-EQL 360
>gi|170026209|ref|YP_001722714.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186893559|ref|YP_001870671.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|420570412|ref|ZP_15065845.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|420576075|ref|ZP_15070964.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|420634593|ref|ZP_15123519.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|420656190|ref|ZP_15143047.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|420677196|ref|ZP_15162026.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|420715828|ref|ZP_15195768.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|420748668|ref|ZP_15224634.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|420759919|ref|ZP_15234148.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|420770307|ref|ZP_15243422.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|420775288|ref|ZP_15247941.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|420786536|ref|ZP_15257793.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|420791561|ref|ZP_15262319.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|420807567|ref|ZP_15276750.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
gi|169752743|gb|ACA70261.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis YPIII]
gi|186696585|gb|ACC87214.1| ATP-dependent DNA helicase RecQ [Yersinia pseudotuberculosis PB1/+]
gi|391437458|gb|EIQ98312.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-05]
gi|391441078|gb|EIR01593.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-06]
gi|391501167|gb|EIR55597.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-19]
gi|391518233|gb|EIR70963.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-34]
gi|391549862|gb|EIR99531.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-46]
gi|391581169|gb|EIS27080.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-56]
gi|391611365|gb|EIS53551.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-64]
gi|391626018|gb|EIS66438.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-66]
gi|391635100|gb|EIS74299.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-72]
gi|391645325|gb|EIS83215.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-76]
gi|391652808|gb|EIS89836.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-89]
gi|391658455|gb|EIS94858.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-90]
gi|391675277|gb|EIT09812.1| ATP-dependent DNA helicase RecQ [Yersinia pestis PY-93]
Length = 597
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 213/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 4 LRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 57
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 58 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 99
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 100 --SGQIKLLYIAPERLVMESF---LDQLYQW-RPALLAVDEAHCISQWGHDFRPEYRALG 153
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 154 QLKQRFPD-LPVIALTATADEATRGDIVRLLNLDQP--LIQISSFDRPNIRYTLVEKFKP 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 211 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 256
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 257 LDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 316
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 317 DGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 375
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 208/410 (50%), Gaps = 53/410 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L LK FG+D+F+ ++ I L D+ + MPTG G + + I
Sbjct: 6 QLEKALKYHFGYDNFRP--GQREIVEDALSNRDLLIIMPTGG----GKSLCFQLPALIKK 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV--TGRSDLYQLELIVSGQTKTENK 152
G + +SP+++ D+ + G + + + S QT++ +
Sbjct: 60 GLTVV-----------VSPLIA-----LMQDQVEALRKNGVAATFLNSSLNSYQTRSREQ 103
Query: 153 AILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
IL+ ++KLLYV PER V++ F L + ++ +DEAHCVSEWGHDFR
Sbjct: 104 YILQ------GKVKLLYVAPERLVSDRFLPFLDLIHHQVGISAFAIDEAHCVSEWGHDFR 157
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YR+L LR+ + +P A TATA V+ DII L P + S R NL+Y+V
Sbjct: 158 PEYRQLILLRKRYAD-VPTWAFTATATDRVRNDIIQQLGLQNP-SIHIASFNRQNLYYEV 215
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
K++YA + E I G GIIYC TR+ ++ L+
Sbjct: 216 RPKK--KNAYAELLELIRDSEGS-------GIIYCLTRKKVDEITFKLQHDQVSALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+ ER++ Q F+R ++ V+ ATI+FGMGI++ +VRFV+H+ +P ++ +YYQESGRAG
Sbjct: 267 GLTDEERTQNQTRFIRDDVRVMVATIAFGMGINKPDVRFVIHFDIPRNLESYYQESGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RDG S C ++ S K +E++I S +EQL K + M++Y E
Sbjct: 327 RDGEASRCTLFFSYADVKIIEFLI-NQKSEPQEQLIAK-QQLRQMIDYAE 374
>gi|288550569|ref|ZP_05970934.2| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
gi|288314641|gb|EFC53579.1| ATP-dependent DNA helicase RecQ [Enterobacter cancerogenus ATCC
35316]
Length = 630
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 25 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 82
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 83 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 120
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 121 TREQQQDVMAGCR--NGQIRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 174
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N P+ + S+F R
Sbjct: 175 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDPF--IQVSSFDR 231
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 232 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 277
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 278 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 337
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 338 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 397
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 398 AQTCRRLVLLNY 409
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 205/407 (50%), Gaps = 57/407 (14%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 646 FGLKSFRPN-QLQVINAALL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 695
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKP 163
ISP+ S + + + + +S I Q+ E I +L P
Sbjct: 696 -------ISPLKSLIFDQVSKLSSLDICAKS-------ISGDQSLDEVMTIYRDLESHPP 741
Query: 164 RIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELR 222
+KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++LG LR
Sbjct: 742 LVKLLYVTPEKISSSPRFQDTLDQLNANNYISRFVIDEAHCVSQWGHDFRPDYKKLGILR 801
Query: 223 QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI-------FD 275
+ N +P +ALTATA P V+QDI+ L K F +S R NL Y V+ D
Sbjct: 802 KRFPN-VPTMALTATATPRVRQDILQQLNLTH-CKWFLSSFNRRNLRYQVLPKKGVSTLD 859
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE--- 328
D+ + FI+ A GIIYC +R+ ++A + R ++ H
Sbjct: 860 DM--------RNFIQS-----RPATASGIIYCLSRKECDEVAKKMCAVGIRALSYHAGLT 906
Query: 329 ---RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R Q+ ++ ++ VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRDG
Sbjct: 907 DVVRESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDG 966
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C +Y++ + L+ ++ D + + ++ +N ++ YCE
Sbjct: 967 EIADCILYYNYSDMQRLKKMMDADRALQYHVKKIHIENLNRIVGYCE 1013
>gi|313148719|ref|ZP_07810912.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313137486|gb|EFR54846.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 607
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/409 (31%), Positives = 212/409 (51%), Gaps = 56/409 (13%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
++ LK FG+DSF+ LQ++ IR+ L+ D V MPTG G + + +
Sbjct: 6 QMIQTLKTYFGYDSFR-PLQEEIIRN-LMSKRDALVLMPTGG----GKSICYQLPALLME 59
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
G + ISP++S +D S+ L S ++EN +
Sbjct: 60 GTAIV-----------ISPLIS----LMKDQVESLCANGIPAGALN---SSNDESENANL 101
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
+ ++KLLY++PE+ ++E+ +L+R ++ VDEAHC+S+WGHDFRP
Sbjct: 102 RRAC--ISGKLKLLYISPEKLLSEA-----DYLLRDMTISLFAVDEAHCISQWGHDFRPE 154
Query: 215 YRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
Y R+G LR QF ++P+IALTATA+ ++DI+ L+ +P ++F +S R NL V
Sbjct: 155 YARMGFLRTQFP--NVPMIALTATADKITREDIVRQLQLKQP-EIFISSFDRPNLSLSVK 211
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + +FI + + GIIYC +R T +A L++
Sbjct: 212 RGYQPKEKSKAIVDFIAR------HRDESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAG 265
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ +R Q+ F+ I V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGR
Sbjct: 266 LSARQRDEAQDDFINDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGR 325
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
DG+ S +++S + ++ T +T+ Q + + M +Y E
Sbjct: 326 DGMPSDTILFYSLG-----DLILLTKFATESNQQNINLEKLNRMQQYAE 369
>gi|408394183|gb|EKJ73417.1| hypothetical protein FPSE_06410 [Fusarium pseudograminearum CS3096]
Length = 482
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 169/309 (54%), Gaps = 32/309 (10%)
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
I +L PR++LLYVTPE + F LQ + + +LA + +DEAHC+SEWGHDFR
Sbjct: 107 IERDLESGHPRLRLLYVTPELCSSPRFRERLQLVYKQKELARVAIDEAHCISEWGHDFRK 166
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNK-PYKV--FKTSTFRSNLFY 270
+ RL R T +PI+ LTATA P V+QD++S+LK ++ P K F + R NL
Sbjct: 167 DFSRLSWFRD-TFPDVPIMCLTATANPQVRQDVLSILKLDENPEKTKKFLMNPQRKNLHL 225
Query: 271 DVIF-----DDLLKDSYAHVKEFIEKCLGKDNKA----------NNCGIIYCRTREHTTD 315
++ + D L D +K + G + +A N GIIY +R+
Sbjct: 226 EIRYTKDEEDTRLNDFLRWIKSVYARREGGERRAELDQVNERVDNVPGIIYTISRDECES 285
Query: 316 LADALR------RKVNKHERSRVQESFMRGEIN------VITATISFGMGIDRQNVRFVV 363
LA +LR R + V+E + IN +I AT +FGMGID+ NVRFVV
Sbjct: 286 LAASLRSEGIGARPFHARLPKDVKEETLARWINNEVGYDIIVATTAFGMGIDKDNVRFVV 345
Query: 364 HWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKN 423
HW +P S YYQE+GRAGRDG SYC +Y+S + + +I++D+ + Q+ + K+
Sbjct: 346 HWRIPKSFEGYYQEAGRAGRDGNASYCFLYYSREDLERVTRLIRSDSKEETNQI-ARLKS 404
Query: 424 YLSMLEYCE 432
++ +YCE
Sbjct: 405 LQALAQYCE 413
>gi|304398161|ref|ZP_07380036.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|440760554|ref|ZP_20939663.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
gi|304354447|gb|EFM18819.1| ATP-dependent DNA helicase RecQ [Pantoea sp. aB]
gi|436425719|gb|ELP23447.1| ATP-dependent DNA helicase RecQ [Pantoea agglomerans 299R]
Length = 609
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/430 (30%), Positives = 218/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V QE A+ L+ FG+ F+ ++ I H L D V MPTG + + A
Sbjct: 6 VLNQEALAQQVLQDTFGYQHFRPG--QQTIIHQALSGRDCLVVMPTGGGKSLCYQIPALV 63
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
R G + +SP++S ++ + D+ + G + Y + S T+
Sbjct: 64 R----EGLTLV-----------VSPLIS--LMKDQVDQL-LANGVAAAY----LNSTMTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ + ++ + R R+KLLY+ PER + ++F L H + A + VDEAHC+S+WG
Sbjct: 102 DQQQTVMADCR--TGRVKLLYIAPERLMMDNFLESLAHW----QPAMLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP Y LG++RQ +P++ALTATA+ + + DI+++L P + + S+F R N
Sbjct: 156 HDFRPEYGALGKMRQ-RFPELPVMALTATADETTRNDIVNLLHMQDP--LIQISSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D LL+ +++ GK CGIIYC +R D A L+
Sbjct: 213 IRYTLVEKFKPTDQLLR--------YVQDQRGK------CGIIYCNSRAKVEDTAARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ +R RVQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGFSVGAYHAGIDSEQRGRVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMMLYDPADMAWLRKCLEEKVPGPLQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|113971918|ref|YP_735711.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
gi|113886602|gb|ABI40654.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-4]
Length = 607
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 221/407 (54%), Gaps = 54/407 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ + L+ +L +FG+ F+ + Q++ I + D V MPTG G + +
Sbjct: 8 IHDDPLSQRLAQVFGYRDFR-DGQREVIERVC-SGEDCLVIMPTGG----GKSLCYQLPA 61
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKT 149
+ PG + +SP++S +D S++ TG + Y + S Q +
Sbjct: 62 LLMPGITIV-----------VSPLIS----LMKDQVDSLLQTGVNAAY----LNSSQPRE 102
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
++ +L +L + +KLLYV+PER +T F ++ L L+ +DEAHC+S+WGH
Sbjct: 103 QSVEVLRQLH--RGELKLLYVSPERLLTADFIERMRSL----PLSMFAIDEAHCISQWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y LG+L+Q + +P++ALTATA+ + +Q+I L N P+K+ +S R N+
Sbjct: 157 DFRPEYAALGQLKQLFPH-VPMMALTATADQATRQNICERLGIN-PFKLL-SSFDRPNIR 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y V + L ++ +++F+ + + + GI+YC +R ++A+ L +
Sbjct: 214 YTVA-EKL--NAANQLRQFLLQ------QNGSSGIVYCSSRRRVDEVAERLTLQGFHAKA 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+G
Sbjct: 265 YHAGMTPQERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
RAGRDGL++ + + ++I+ ++Q++ N ++
Sbjct: 325 RAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVDFHKLNTMA 371
>gi|254361946|ref|ZP_04978077.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452745568|ref|ZP_21945402.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
gi|153093493|gb|EDN74473.1| ATP-dependent helicase RecQ [Mannheimia haemolytica PHL213]
gi|452086443|gb|EME02832.1| ATP-dependent DNA helicase RecQ [Mannheimia haemolytica serotype 6
str. H23]
Length = 599
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 206/389 (52%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ + Q++ I +L D V M TG + V A
Sbjct: 9 LNNIFGYQKFR-DGQEEVINAVL-ENRDCLVIMTTGGGKSLCYQVPA-----------LC 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L+G I+ ++S +D ++T +E T+T + L E +
Sbjct: 56 LDG--------ITLVISPLISLMKDQVDQLITNG-----IEAAYLNSTQTLEEQQLVEQK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T+ F H + K+++I VDEAHCVS+WGHDFRP Y LG
Sbjct: 103 ALSGQLKLLYLSPEKVMTQGFF----HFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LR T ++P++ALTATA+ + + DI+ L+ N P+ ++ S R N+ Y V + K
Sbjct: 159 GLRN-TFPNVPLMALTATADLTTRSDILHHLRLNSPH-IYLGSFDRPNIRYTV--QEKFK 214
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR-RKVNK---------HER 329
+K FI K GK GI+YC +R+ ++ + L RK++ +R
Sbjct: 215 PLEQLIK-FISKQQGKS------GIVYCNSRKKVEEITEKLSARKISVMGYHAGMSFEQR 267
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ +F R +I ++ ATI+FGMGI++ NVRFVVH+ +P SI +YYQE+GRAGRD L S
Sbjct: 268 ERVQNAFQRDDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSE 327
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ + +++ ++
Sbjct: 328 AVLFYDPSDYAWLQKILLEEPESEQRNIK 356
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 201/366 (54%), Gaps = 51/366 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ LQ + I I+ + D V MPTG G + + + PG +
Sbjct: 7 LKKYFGYDSFR-PLQAEIIETIIAQ-KDCMVLMPTGG----GKSICFQVPAMVMPGITLV 60
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP+++ + + +S+ + S + E + I E+ +
Sbjct: 61 -----------ISPLIALM-------QDQVQALKSNGIPAAFLNSTLSTIEQRTIEEDCK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+KLLY++PE+ + ++ ++ L + I +DE+HCVS WGHDFRP Y +L
Sbjct: 103 --NGSLKLLYISPEKLFSNNYLGFIKTL----NVNQIAIDESHCVSTWGHDFRPEYIQLK 156
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ T ++P++ALTATA+ ++DI++ L + +F +S R NL V+ +
Sbjct: 157 ALKD-TFPNVPMVALTATADRVTRKDILNQLGIPEAL-IFISSFDRPNLNLRVLPG---R 211
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHER 329
+ + EFI K + N GIIYC +R++T D+A+ LR+ ++ R
Sbjct: 212 NRLKVIHEFIAK------RTNQSGIIYCLSRKNTEDVAEGLRKLGIRAMHYHAGLDAQTR 265
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQ+++++ EI VI ATI+FGMGID+ NVRFV+H+ +PS++ ++YQE GRAGRDG++S
Sbjct: 266 AEVQDAYIKDEIQVIVATIAFGMGIDKSNVRFVIHYSLPSNVESFYQEIGRAGRDGMKSD 325
Query: 390 CRIYHS 395
+++S
Sbjct: 326 TLLFYS 331
>gi|322834919|ref|YP_004214946.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|384260143|ref|YP_005404077.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
gi|321170120|gb|ADW75819.1| ATP-dependent DNA helicase RecQ [Rahnella sp. Y9602]
gi|380756119|gb|AFE60510.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis HX2]
Length = 610
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 218/429 (50%), Gaps = 64/429 (14%)
Query: 31 VSEQELTAK-LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++++EL + L+ FG+ F+ ++ I + L D V MPTG + + A
Sbjct: 7 INKEELAHQVLRDTFGYQQFRPG--QQTIINTALSGRDCLVVMPTGGGKSLCYQIPA--- 61
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+++G ++ ++S +D ++ + L S QT+
Sbjct: 62 --------LVMDG--------LTLVVSPLISLMKDQVDQLMAAGVEAGCLN---STQTRE 102
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ ++ R RIK+LY+ PER + F L+ L ++N A + VDEAHC+S+WGH
Sbjct: 103 QQLEVMAGCR--AGRIKMLYIAPERLMMGDF---LEQLQQWNP-AMLAVDEAHCISQWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNL 268
DFRP YR LG+L+ +P+IALTATA+ + + DI+ +L+ N P + + S+F R N+
Sbjct: 157 DFRPEYRALGQLK-LRYPQLPVIALTATADEATRNDIVRLLELNDP--LIQVSSFDRPNI 213
Query: 269 FYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
Y ++ D L++ F++ GK GIIYC +R D A L+ +
Sbjct: 214 RYTLVEKFKPLDQLIR--------FVQDQRGKS------GIIYCNSRAKVEDTAARLQSR 259
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ R+RVQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +
Sbjct: 260 GLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRTIES 319
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
YYQE+GRAGRDGL + + + L ++ + ++ +E N ++ +
Sbjct: 320 YYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDVERHKLNAMNAFAEAQT 379
Query: 434 GYFLVILVF 442
LV+L +
Sbjct: 380 CRRLVLLNY 388
>gi|147673915|ref|YP_001218455.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227116593|ref|YP_002818489.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262167384|ref|ZP_06035092.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
gi|146315798|gb|ABQ20337.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|227012043|gb|ACP08253.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae O395]
gi|262024186|gb|EEY42879.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC27]
Length = 620
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGRDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ +P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLKEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 214/418 (51%), Gaps = 52/418 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+++ + L FG F+ Q +AI + L D FV MPTG + + A
Sbjct: 682 KDVKSALLHRFGLSGFRLN-QLEAI-NATLSGKDAFVLMPTGGGKSLCYQLPA------- 732
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G + ISP+LS +D+ V +L+ +++G E+K+
Sbjct: 733 ----VVNSGTTKGVTVVISPLLS-----LMEDQ---VAHLKELHIQAFLLNGDVNKEHKS 780
Query: 154 ILEELRLVKPR----IKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCVSE 206
++ L P I+LLYVTPE + LL L R + KLA IV+DEAHCVS+
Sbjct: 781 LIYSA-LANPNVEKLIQLLYVTPE--MVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQ 837
Query: 207 WGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
WGHDFRP Y+ LG R +F G IP++ALTATA +VK D+I L +VF S R
Sbjct: 838 WGHDFRPDYKELGNTRAKFPG--IPLMALTATATENVKIDVIHNLGMRN-AEVFVQSFNR 894
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL Y+V K +V E I + + ++ + GIIYC +R +A LR K
Sbjct: 895 PNLTYEV----RPKPKNTNVIESIAETI-NESYSGQAGIIYCLSRRSCEKVAAQLRDKYK 949
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ ER +Q + G+ NVI ATI+FGMGID+ +VRFV+H MP S+ Y
Sbjct: 950 IKAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGY 1009
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YQE+GRAGRDG +S C +Y+ L ++I + EQ + + + ++++CE
Sbjct: 1010 YQETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGS-FEQKKRQRQMLRHVVQFCE 1066
>gi|392981231|ref|YP_006479819.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327164|gb|AFM62117.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 609
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +I+LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 100 TREQQQEVMAGCR--TGQIRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 211 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 256
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 257 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 316
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 317 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 376
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 377 AQTCRRLVLLNY 388
>gi|123426519|ref|XP_001307056.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121888663|gb|EAX94126.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1279
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/403 (33%), Positives = 211/403 (52%), Gaps = 44/403 (10%)
Query: 41 KALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFIL 100
K +FG DSF+ +Q AI +R +D+F+ MPTG G + ++L
Sbjct: 564 KNVFGHDSFRG-VQLPAIA-AAVRGNDVFILMPTGG----GKSLC------------YML 605
Query: 101 NGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRL 160
G V+ G ++ ++S +D + +S Q ELI + E IL E +
Sbjct: 606 TGMVQ---GGVTLVISPLLSLIKDQVDQL---KSLNIQAELINYETKQEEESKILNEAK- 658
Query: 161 VKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ R++ LY+TPE+ ++ + L + NKL IVVDEAHCVS WGHDFRP Y ++G
Sbjct: 659 -QGRVRFLYMTPEKLNLSGNVSQFLNDIYSQNKLTRIVVDEAHCVSHWGHDFRPDYMQIG 717
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV-IFDDLL 278
++R+ +P++ALTATA V +D L K ++F + R N+ ++V +
Sbjct: 718 KVRENYP-EVPLMALTATATQKVIEDCYEQLCM-KNVEIFHQTFNRPNINFEVHAKEGTT 775
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHE 328
+ Y + +I + G DN + GII+C T T +++ L + K++
Sbjct: 776 EGCYNQIVNWIYQ-KGYDNAS---GIIFCMTTRTTEEMSIYLNQRGLRTLHYHGKMDMEH 831
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R Q+ +MR EIN++ AT++FGMGI++ +VRFV+H +P SI YYQE+GR+GRDG ++
Sbjct: 832 RKDTQDRWMRNEINIVVATLAFGMGINKPDVRFVIHHSIPKSIEEYYQEAGRSGRDGKKT 891
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
C + +S L Y+I +T +E K M EYC
Sbjct: 892 DCILLYSSADIDKLLYIICENTPGSQELDRNKVDMLYKMEEYC 934
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/418 (34%), Positives = 214/418 (51%), Gaps = 52/418 (12%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+++ + L FG F+ Q +AI + L D FV MPTG + + A
Sbjct: 682 KDVKSALLHRFGLSGFRLN-QLEAI-NATLGGKDAFVLMPTGGGKSLCYQLPA------- 732
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G + ISP+LS +D+ V +L+ +++G E+K+
Sbjct: 733 ----VVNSGTTKGVTVVISPLLS-----LMEDQ---VAHLKELHIQAFLLNGDVNKEHKS 780
Query: 154 ILEELRLVKPR----IKLLYVTPERAVTESFHYLLQHLVRYN---KLAYIVVDEAHCVSE 206
++ L P I+LLYVTPE + LL L R + KLA IV+DEAHCVS+
Sbjct: 781 LIYSA-LANPNVEKLIQLLYVTPE--MVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQ 837
Query: 207 WGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
WGHDFRP Y+ LG R +F G IP++ALTATA +VK D+I L +VF S R
Sbjct: 838 WGHDFRPDYKELGNTRAKFPG--IPLMALTATATENVKIDVIHNLGMRN-AEVFVQSFNR 894
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL Y+V K +V E I + + ++ + GIIYC +R +A LR K
Sbjct: 895 PNLTYEV----RPKPKNTNVIESIAETI-NESYSGQAGIIYCLSRRSCEKVAAQLRDKYK 949
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ ER +Q + G+ NVI ATI+FGMGID+ +VRFV+H MP S+ Y
Sbjct: 950 IKAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGY 1009
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YQE+GRAGRDG +S C +Y+ L ++I + EQ + + + ++++CE
Sbjct: 1010 YQETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGS-FEQKKRQRQMLRHVVQFCE 1066
>gi|238763624|ref|ZP_04624584.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
gi|238698102|gb|EEP90859.1| ATP-dependent DNA helicase recQ [Yersinia kristensenii ATCC 33638]
Length = 610
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 217/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 6 VINRELLAEQVLRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQI 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP++S + D + G L S QT+
Sbjct: 60 PALVTDGLTLV-----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ A+++ R +IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WG
Sbjct: 102 EQQLAVMDGCR--SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+Q + +P+IALTATA+ + + DI+ +L P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLKQRFPD-LPVIALTATADEATRGDIVRLLNLENP--LIQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D L + F++ GK GIIYC +R D L+
Sbjct: 213 IRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|183600296|ref|ZP_02961789.1| hypothetical protein PROSTU_03856 [Providencia stuartii ATCC 25827]
gi|188020087|gb|EDU58127.1| ATP-dependent DNA helicase RecQ [Providencia stuartii ATCC 25827]
Length = 608
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 215/417 (51%), Gaps = 59/417 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG+ SF+ Q+ IR IL D V MPTG G + + + G +
Sbjct: 17 LNNTFGYQSFR-PGQEAVIRAIL-DNRDCLVLMPTGG----GKSLCYQVPALVKEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R + + S QT E + ++
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRLHGIKAACLNSSQTAQEQRDVMA--L 110
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLYV PER +T+ Y L L +N ++ + VDEAHCVS+WGHDFRP YR +G
Sbjct: 111 CAQGAIKLLYVAPERLLTD---YFLSQLSSWN-ISLLAVDEAHCVSQWGHDFRPEYRAIG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LRQ + +PI+ALTATA+ + + DI+ +L + P + + S+F R N+ Y ++
Sbjct: 167 QLRQHFPD-VPIMALTATADETTRADIVRLLALHDP--LIQISSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + + FI+ GK GI+YC +R + A+ L+++ ++
Sbjct: 219 -EKYKPLDQLWFFIKAQKGK------AGIVYCNSRSKVEETAERLQKRGLSVAAYHAGLD 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ++F++ + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG
Sbjct: 272 NQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDG 331
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ +++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 332 VEAEAVLFYDPADMAWLRRCLEEKPAGLQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 209/415 (50%), Gaps = 48/415 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
Q+L L FG F+ Q + I L H FV MPTG SL + S
Sbjct: 850 QDLRTALIRRFGLRGFRPG-QLETINTTLAGNH-CFVLMPTGGGKSLCYQLPS------- 900
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
I +G +SP+LS +D+ R + Q LI T + K
Sbjct: 901 -----VIASGKTHGVTLVVSPLLS-----LMEDQVEACRQRFGM-QAFLINGESTAAQKK 949
Query: 153 AILEELRLVKPR--IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
I++ LR P+ I++LYVTPE + + Q L LA IV+DEAHCVS+WGH
Sbjct: 950 MIMDGLRERDPQQFIQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGH 1009
Query: 210 DFRPTYRRLGEL-RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LG++ RQF G +P++ALTATA V+ D++S L + F S R NL
Sbjct: 1010 DFRPDYKALGDVVRQFPG--VPVLALTATATKLVRSDVVSNLGIQG-CQEFSQSFNRPNL 1066
Query: 269 FYDVIFDDLLKDSYAHVKEFI-EKCLGKDNKANNCGIIYCRTREHTTDLADAL------- 320
Y+V+ K + E I E+ +GK GIIYC +R+ +A L
Sbjct: 1067 SYEVLPKG--KGIINSIAELIKERYVGK------SGIIYCLSRKSCEQVAQKLSDMGIRA 1118
Query: 321 ---RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ +RS VQ + + E +VI ATI+FGMGID+ +VR+V+H +P S+ YYQE
Sbjct: 1119 YHYHAGMDSADRSEVQRKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQE 1178
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+GRAGRDG +S C +Y+ + L +I + REQ + ++++YCE
Sbjct: 1179 TGRAGRDGKRSECYLYYLYADSRILRKMIDEGEGS-REQKQRLSDMLRTVIQYCE 1232
>gi|381186153|ref|ZP_09893727.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379651827|gb|EIA10388.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 731
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 204/391 (52%), Gaps = 65/391 (16%)
Query: 32 SEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR-- 89
+E ++ +LK FGF FK LQ++ I+ +L R + FV MPTG + + A ++
Sbjct: 4 NEIDIHKELKKYFGFSQFKG-LQEQVIKSLLDR-QNTFVIMPTGGGKSLCYQLPALTQDG 61
Query: 90 --VRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELI 142
+ + P + N ++ S NG I+ +L+S KT I + D I
Sbjct: 62 TAIVVSPLIALMKNQVDAIRSLSSENG-IAHVLNSSLT-----KTEITQVKKD------I 109
Query: 143 VSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAH 202
SG TK LLYV PE E L+ + K++++ +DEAH
Sbjct: 110 TSGLTK------------------LLYVAPESLTKEENVNFLKTV----KISFVAIDEAH 147
Query: 203 CVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTS 262
C+SEWGHDFRP YR L + + G+ +PII LTATA P V++DI+ L FK S
Sbjct: 148 CISEWGHDFRPEYRNLKHIIKQLGD-LPIIGLTATATPKVQEDILKNLDMCDA-TTFKAS 205
Query: 263 TFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
R NL+Y+V K+ + + FI++ GK GIIYC +R+ +A L+
Sbjct: 206 FNRPNLYYEV--RTKTKNVESDIIRFIKQHKGK------SGIIYCLSRKKVEAIAHVLQV 257
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
++ R+R Q+ F+ +++V+ ATI+FGMGID+ +VRFV+H +P S+
Sbjct: 258 NGISAVPYHAGLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLE 317
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
+YYQE+GRAGRDG + +C Y+S + LE
Sbjct: 318 SYYQETGRAGRDGGEGHCLAYYSYKDVEKLE 348
>gi|163754961|ref|ZP_02162082.1| ATP-dependent DNA helicase recQ [Kordia algicida OT-1]
gi|161325028|gb|EDP96356.1| ATP-dependent DNA helicase recQ [Kordia algicida OT-1]
Length = 700
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 196/377 (51%), Gaps = 57/377 (15%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++ L LK FG+D+F+ LQ++ I I D V MPTG + + A
Sbjct: 2 IAPTTLKNTLKEYFGYDTFR-PLQEEIINSIF-SGKDNLVIMPTGGGKSICFQLPA---- 55
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKT 149
+L G ++ ++S +D + T G + Y + S QT+
Sbjct: 56 -------ILLEG--------LTIVISPLIALMKDQVDGLTTNGIAAAY----LNSSQTEI 96
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
E +AI E+ K IKLLY PE S YL +H+ K++ I +DEAHC+S WGH
Sbjct: 97 EQQAIYSEIDAGK--IKLLYTAPE-----SLSYL-EHIFSSQKISLIAIDEAHCISSWGH 148
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNL 268
DFRP Y LG L++ SIP+IALTATA+ + ++DI + L N P+ ++F R NL
Sbjct: 149 DFRPAYTNLGYLKK-RFPSIPVIALTATADKATREDIANQL--NIPHAKQHIASFDRKNL 205
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
+V + + VK+ I D + GIIYC +R+ T +A+ L+
Sbjct: 206 KLEV------RPANDRVKQIISFI---DERPTESGIIYCLSRKATETVAEKLQNANINAI 256
Query: 324 -----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+ +RS++QE F+ VI ATI+FGMGID+ NVR+V+H+ +P +I YYQE
Sbjct: 257 AYHAGIAHTKRSKIQEDFINDTCQVICATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEI 316
Query: 379 GRAGRDGLQSYCRIYHS 395
GRAGRDGL S ++HS
Sbjct: 317 GRAGRDGLPSNTLLFHS 333
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/408 (34%), Positives = 204/408 (50%), Gaps = 59/408 (14%)
Query: 44 FGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGN 103
FG SF+ Q + I LL +D FV MPTG G + + + G +
Sbjct: 564 FGLKSFRPN-QLQVINAALL-GNDCFVLMPTGG----GKSLCYQLPAILTEGVTIV---- 613
Query: 104 VRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG-QTKTENKAILEELRLVK 162
ISP+ S + + + + +S +SG QT E I +L
Sbjct: 614 -------ISPLKSLIFDQVNKLASLDICAKS--------MSGEQTLDEVMTIYRDLECHP 658
Query: 163 PRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGEL 221
P +KLLYVTPE+ + + F L L N ++ V+DEAHCVS+WGHDFRP Y++LG L
Sbjct: 659 PLVKLLYVTPEKISSSARFQDTLDQLSANNYISRFVIDEAHCVSQWGHDFRPDYKKLGIL 718
Query: 222 RQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI-------F 274
R+ N +P +ALTATA P V+QDI+ L K F +S RSNL Y V+
Sbjct: 719 RKRFPN-VPSMALTATATPRVRQDILQQLNLTH-CKWFLSSFNRSNLRYQVLPKKGASTL 776
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKHE-- 328
DD ++ FI+ GIIYC +R+ ++A + R V H
Sbjct: 777 DD--------IRSFIQT-----RAVTASGIIYCLSRKECDEVAQKMCAVGIRAVAYHAGL 823
Query: 329 ----RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
R Q+ ++ ++ VI ATI+FGMGID+ +VRFV+H+ +P SI YYQE+GRAGRD
Sbjct: 824 TDAARESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRD 883
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
G + C +Y++ L+ ++ D + + ++ N ++ YCE
Sbjct: 884 GEIADCILYYNYSDMLRLKKMMDADRALQYHVKKIHIDNLHRIVGYCE 931
>gi|284006614|emb|CBA71875.1| ATP-dependent DNA helicase [Arsenophonus nasoniae]
Length = 608
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/418 (31%), Positives = 222/418 (53%), Gaps = 61/418 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+ F+ ++ I + +L D V MPTG G + + I PG +
Sbjct: 17 LQQIFGYQQFRPG--QEQIINTILTKQDCLVVMPTGG----GKSLCYQIPALILPGLTIV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL--IVSGQTKTENKAILEE 157
+SP++S ++ + D+ S Y +E + S QT + K ++E
Sbjct: 71 -----------VSPLIS--LMKDQVDQLS-------QYGIEASYLNSSQTGQQQKQVIEY 110
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
R + +IKLLY+ PER V ++F L L + N + + VDEAHC+S+WGHDFRP YR
Sbjct: 111 CR--QGKIKLLYIAPERLVMDNF---LDRLPKLNPV-LLAVDEAHCISQWGHDFRPEYRA 164
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG+LR+ + +P+IALTATA+ + + DII L+ +P V +S R N+ Y ++
Sbjct: 165 LGQLRR-RFSQLPVIALTATADQTTRNDIIHGLELCEPL-VHISSFDRPNIRYTLV---- 218
Query: 278 LKDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------V 324
+ Y + + FI+ + N GI+YC +R + A+ L ++ +
Sbjct: 219 --EKYKPLDQLWFFIK------GQKGNSGIVYCNSRSKAEETAERLHKRGLSAAAYHAGL 270
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ +R++VQ++F + ++ V+ AT++FGMGI++ NVRFVVH+ + +I +YYQE+GRAGRD
Sbjct: 271 DNTQRAKVQDAFQKDDLQVVVATVAFGMGINKSNVRFVVHFDIARNIESYYQETGRAGRD 330
Query: 385 GLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
GL + +++ L + + + +++E N +S + LV+L +
Sbjct: 331 GLAAEAILFYDPADLSWLRRCLAEKPAGQLQEIERHKLNAMSAFAEAQTCRRLVLLNY 388
>gi|375255218|ref|YP_005014385.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
gi|363408301|gb|AEW21987.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
Length = 786
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/410 (32%), Positives = 209/410 (50%), Gaps = 56/410 (13%)
Query: 6 SKDASSAVGKSSSLTGNQQDRKGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRT 65
S +A + K S ++D G ++E L FGF SFK QK+ I ++L
Sbjct: 41 SGEAVAQTAKKVSTGRTKKDLTGADITEALLFH-----FGFSSFKGN-QKEIIENVLA-G 93
Query: 66 HDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDD 125
D FV MPTG +S P +++G ISP+++
Sbjct: 94 KDTFVLMPTGG---------GKSLCYQLPS--LMMDGTALV----ISPLIALM------- 131
Query: 126 KTSIVTGRSDLYQLELIVSGQTKTENKAILEELR--LVKPRIKLLYVTPERAVTESFHYL 183
+ V + + + + + N+A +E+++ ++ + KLLYV PE E
Sbjct: 132 -KNQVDAMRNFSEEDGVAHFINSSLNRAAIEQVKQDILSGKTKLLYVAPESLTKEENIGF 190
Query: 184 LQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVK 243
L+ + K+++ VDEAHC+SEWGHDFRP YRR+ + G P+IALTATA P V+
Sbjct: 191 LRQV----KISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKR-PLIALTATATPKVQ 245
Query: 244 QDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCG 303
DI L KVFK+S R+NL+Y++ KD + ++I+ GK G
Sbjct: 246 HDIQKNLGMMDA-KVFKSSFNRANLYYEIRPKG--KDIDREIIKYIKANEGK------SG 296
Query: 304 IIYCRTREHTTDLADAL----------RRKVNKHERSRVQESFMRGEINVITATISFGMG 353
IIYC +R+ + AD L ++ +RS Q++F+ + +VI ATI+FGMG
Sbjct: 297 IIYCLSRKKVEEFADILCANGIKALPYHAGMDSQQRSANQDAFLMEKTDVIVATIAFGMG 356
Query: 354 IDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLE 403
ID+ +VR+V+H+ +P S+ YYQE+GRAGRDG + C +++ + LE
Sbjct: 357 IDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCVAFYANKDLQKLE 406
>gi|429767396|ref|ZP_19299595.1| ATP-dependent DNA helicase RecQ [Clostridium celatum DSM 1785]
gi|429181004|gb|EKY22199.1| ATP-dependent DNA helicase RecQ [Clostridium celatum DSM 1785]
Length = 583
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/413 (33%), Positives = 214/413 (51%), Gaps = 56/413 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+ F+ + Q++ IR IL +D+ MPTG G + + + G +
Sbjct: 8 LKKYYGYTCFR-QGQEEIIREIL-NGNDVLTIMPTGG----GKSICYQIPALLLDGVTIV 61
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENKAILEEL 158
ISP++S +D +I G Y I S + E IL E
Sbjct: 62 -----------ISPLIS----LMKDQVDNINNLGIKSAY----INSSLSNIEIDNILNEA 102
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
K IK+LYV PER + +F L+ + ++ I +DEAHCVS+WGHDFR +Y+++
Sbjct: 103 --AKNEIKILYVAPERLESYAFMELIASI----NISMIAIDEAHCVSQWGHDFRSSYKKI 156
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
N + A TATA V++DII++L+ N P KVF + R NL VI ++
Sbjct: 157 SRAISLLRNRPIVTAFTATATKEVREDIINLLELNSP-KVFISGFDRPNLKI-VIEKGVI 214
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K Y + ++I +NK + CGIIYC T++ L + L K ++ E
Sbjct: 215 KKRY--ILDYI-----NENK-DQCGIIYCSTKKEVEALHEFLESKGIESKKYHAGLSGEE 266
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + QE F+ +N+I ATI+FGMGID+ NVR+V+H+ MP +I YYQE GRAGRDG +S
Sbjct: 267 RKQAQEDFIYDRVNIIIATIAFGMGIDKPNVRYVIHYNMPKNIEGYYQEIGRAGRDGEKS 326
Query: 389 YCRIYHSEHSKKSLEYVIKTDT-STKREQLEL-KFKNYLSML--EYCEQGYFL 437
C + S + +Y+I T + R++ EL K + ++++ + C + Y L
Sbjct: 327 ECIMLFSPGDVTTQKYIIDNSTENIMRKENELAKLQTMINLIYTQDCYRKYIL 379
>gi|393763185|ref|ZP_10351808.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
gi|392606102|gb|EIW88990.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
Length = 606
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 216/416 (51%), Gaps = 62/416 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ EQ LTA LK +FG+ S++ + I L D FV +PTG G + +
Sbjct: 1 MPEQLLTA-LKQIFGYSSWRDG--QAEIIAAALAGRDCFVLLPTGG----GKSLCYQLPA 53
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSG--QTK 148
P + +SP++S ++ + D Q I + +
Sbjct: 54 LQLPKVTVV-----------VSPLMS------------LMKDQVDTLQANGIAAAYVNSS 90
Query: 149 TENKAILEELRLVK-PRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEW 207
+A+LE L ++ +KLLYV PER + F LQ + ++ +DEAHCVS+W
Sbjct: 91 LSREAVLEVLNQLRYDELKLLYVAPERLLQPQFIERLQEV----GVSLFAIDEAHCVSQW 146
Query: 208 GHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRS 266
GHDFRP Y L +LRQ F G +P++ALTATA+P+ +QDI+ L +P+ + + S R
Sbjct: 147 GHDFRPDYMALAQLRQHFPG--VPVMALTATADPATQQDIVQQLALQQPF-IHRGSFDRP 203
Query: 267 NLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNK 326
N+ Y V ++ + +++ + + N+ GIIYC +R +L L+ K K
Sbjct: 204 NIRYTV------QEKFRPLEQLLAYL---KQQENHSGIIYCSSRRKVDELTAQLQEKGFK 254
Query: 327 -------HE---RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
H+ R +VQ++F R ++ +I AT++FGMG+D+ N+RFVVH+ +P +I AYYQ
Sbjct: 255 AAAYHAGHDATHRQQVQDAFKRDDLALIVATVAFGMGVDKPNIRFVVHFELPRTIEAYYQ 314
Query: 377 ESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
E+GRAGRDG+ + + ++ ++T+ + R E+ ++ +LSM + E
Sbjct: 315 ETGRAGRDGVAAEALLLFDPADIGRMKRWLQTEENNLRA--EVTWQRFLSMAAFAE 368
>gi|427717685|ref|YP_007065679.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
gi|427350121|gb|AFY32845.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
Length = 720
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 208/412 (50%), Gaps = 59/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ ++ I L+ D+ V MPTG G + + + G
Sbjct: 7 LEQALKYHFGYDRFRP--GQRQIIEDALQNRDLMVVMPTGG----GKSLCFQLPALLKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ +SP+++ LR + + + + Y++ ++
Sbjct: 61 LTVV-----------VSPLIALMQDQVESLRNNNISATFLNSSLNAYKV--------RSR 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+AIL R+KLLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 102 EEAIL------NGRVKLLYVAPERLLSERFLPFLDLINHQIGISSFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L LR+ + IP +ALTATA V+ DII L +P + S R NL+Y
Sbjct: 156 FRPEYRQLKSLRKRYPD-IPTVALTATATDRVRADIIQQLGLKQP-SIHIASFNRQNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
++ K +YA + E I + G I+YC TR+ +L L+
Sbjct: 214 EI--RSKTKYAYAELLELIRETEG-------SAIVYCLTRKKVDELTFKLQNDKVAALPY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ ERS+ Q F+R ++ V+ ATI+FGMGI++ +VR V+H+ +P ++ +YYQESGR
Sbjct: 265 HAGLSDEERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRLVIHFDIPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG S C ++ S K++E+ I T + EQL K + M++Y E
Sbjct: 325 AGRDGEPSRCTVFFSFGDIKTIEWSIDQKTDPQ-EQLIAK-QQLRQMIDYAE 374
>gi|395645903|ref|ZP_10433763.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
gi|395442643|gb|EJG07400.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
Length = 724
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 167/278 (60%), Gaps = 26/278 (9%)
Query: 165 IKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQF 224
+++L+++PE+ + SF L + R+ + I +DEAHC+SEWGH+FRP YR+L LR+
Sbjct: 107 VRMLFISPEKCMQPSF---LSFINRF-PVRLIAIDEAHCISEWGHNFRPEYRQLSALREH 162
Query: 225 TGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAH 284
+PI+ALTATA P+V++DI + L+ + + + S R NL Y V+ +
Sbjct: 163 F-PPVPIVALTATAIPAVREDICTQLQLSD-VREYIGSFNRPNLSYRVVPKN-------K 213
Query: 285 VKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHERSRVQE 334
EFI +G+ N+ GIIYC +R+ T DLA+ L + R +VQE
Sbjct: 214 PVEFILDYIGQ--HPNDSGIIYCLSRKATEDLAETLVEHGHMASAYHAGLLPEVRKKVQE 271
Query: 335 SFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYH 394
+F++ +I++I AT++FGMGID+ +VR+V+H +P S+ AYYQESGRAGRDG C + +
Sbjct: 272 AFIKDDISIICATVAFGMGIDKPDVRYVIHHDLPKSVEAYYQESGRAGRDGQPGECILLY 331
Query: 395 SEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
S + Y+++ D + EQ + FK +++YCE
Sbjct: 332 SRGDLAKVRYLLEHDDQDE-EQSGIAFKKMQEVVDYCE 368
>gi|170718152|ref|YP_001785180.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
gi|168826281|gb|ACA31652.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 2336]
Length = 624
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 161/268 (60%), Gaps = 29/268 (10%)
Query: 164 RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ 223
++KLLY++PE+A+T SF + + H K+++I VDE HC+S+WGHDFRP Y +LG L+
Sbjct: 127 KLKLLYISPEKALTTSFFHFISHC----KVSFIAVDETHCISQWGHDFRPEYTQLGGLKA 182
Query: 224 FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI--FDDLLKDS 281
++ PI+ALTATA+ + +QDI+ LK + P+ ++ S R N+ Y ++ F +
Sbjct: 183 SFPDA-PIMALTATADQATRQDILIHLKLSNPH-IYIGSFDRPNIRYSLVEKFKPM---- 236
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSR 331
+ +FI K GK+ GIIYC +R +A++LR+K ++ +R
Sbjct: 237 -EQLSQFIAKQKGKN------GIIYCNSRNKVERIAESLRQKGISAEAYHAGMSNEQREF 289
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
VQ +F + ++ ATI+FGMGI++ NVRFV H+ +P SI AYYQE+GRAGRD L +
Sbjct: 290 VQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRAGRDDLPAEAV 349
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLEL 419
+++ L+ V+ + Q+EL
Sbjct: 350 LFYEPADYAWLQKVLLEKPDIPQRQIEL 377
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1394
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 210/419 (50%), Gaps = 62/419 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ KL+ +F +F+ Q +AI + L D+FV MPTG + + A
Sbjct: 617 EVFHKLQNIFKLPNFRPN-QLEAI-NATLGGQDVFVLMPTGGGKSLCYQLPA-------- 666
Query: 95 GADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQ----LELIVSG 145
+ +GN +SP++S +L ++ K S+ + + Q L ++G
Sbjct: 667 ---IVKSGNTSGTTIVVSPLISLMQDQVEHLLAKNIKASMFSSKGTAEQRRQTFNLFING 723
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCV 204
+ L+Y++PE + +Q L R +KL+ IVVDEAHCV
Sbjct: 724 ------------------LLDLVYISPEMICASVQCKNAIQKLYRDHKLSRIVVDEAHCV 765
Query: 205 SEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
S WGHDFRP Y+ L ++ N IP++ALTATA V+ DII L+ +P VF +F
Sbjct: 766 SNWGHDFRPDYKELKFFKEEYPN-IPMMALTATASEQVRMDIIHNLQLRQP--VFLKQSF 822
Query: 265 -RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
R+NL+Y V L+ S + E E K GI+YC ++ A + R
Sbjct: 823 NRTNLYYQV-----LRKSKNSMDEICETI--KTKFRGQTGIVYCHSKNSCEQTAATMVRS 875
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ ER +VQ+ + ++ VI AT++FGMGID+ +VRFV H+ +P ++
Sbjct: 876 GVKCAYYHAGMDPDERLQVQQGWQSNKVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEG 935
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG S+C +Y+S ++++ +I+ D + RE E +++YCE
Sbjct: 936 YYQETGRAGRDGSYSHCIMYYSFRDVRTIQSMIQKDKNLDRENKEKHLNKLQQVMQYCE 994
>gi|310796170|gb|EFQ31631.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 477
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 169/314 (53%), Gaps = 32/314 (10%)
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
E I ++L PRI+LLYVTPE ++SF ++ + +LA I VDEAHC+SEWG
Sbjct: 102 AERDRINQDLASGHPRIRLLYVTPELCSSDSFRRRIKLVHEQCELARIAVDEAHCISEWG 161
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKF-NKP--YKVFKTSTFR 265
HDFR ++RL R+ T S+PI+ LTATA P+V+QD++ L +P K F + +R
Sbjct: 162 HDFRKDFKRLSWFRE-TFPSVPIMCLTATANPTVRQDLLKTLGLLEQPDRLKSFVMTAYR 220
Query: 266 SNLFYDVIF-----DDLLKDSYAHVKEFIEKCLGKDNKA----------NNCGIIYCRTR 310
NL ++ + DD L D A ++ E+ KA N GIIY +R
Sbjct: 221 PNLHIEIRYTKDQDDDRLADFLAWIRSVYERRKAGPRKAELEAVGERLDNVSGIIYTISR 280
Query: 311 EHTTDLADALR----------RKVNKHERSRVQESFMRGE--INVITATISFGMGIDRQN 358
+ LA ALR K+ K + + ++ E +VI AT +FGMGID+ N
Sbjct: 281 DECESLAAALRDEGVGARPFHAKLTKEVKEQTLTRWVNNEPGYDVIVATTAFGMGIDKNN 340
Query: 359 VRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
VRFVVHW +P S YYQE+GRAGRDG S+C +Y+S + ++ +I+ E
Sbjct: 341 VRFVVHWRLPKSFEGYYQEAGRAGRDGNASFCFLYYSREDLQRVQSMIRKGNRDG-SNWE 399
Query: 419 LKFKNYLSMLEYCE 432
+ K+ + YCE
Sbjct: 400 AQAKSLQQLALYCE 413
>gi|374261468|ref|ZP_09620050.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
gi|363538095|gb|EHL31507.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
Length = 607
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 207/420 (49%), Gaps = 59/420 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FGFDSF+ Q+ I+ ++ +D+ V MPTG G + + + PG +
Sbjct: 18 LKEYFGFDSFR-NPQEDIIKDVI-AGNDVLVLMPTGG----GKSLCYQIPSLVRPGVGIV 71
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTG-RSDLYQLELIVSGQTKTENKAILEE 157
+SP+++ D T++ + G R+ Y S T E K +L +
Sbjct: 72 -----------VSPLIA----LMEDQVTALRLQGIRAAYYN-----SSLTSEEAKKVLAQ 111
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
L + LLY+ PER ++ SF LQ ++ +DEAHC+S+WGHDFRP Y
Sbjct: 112 LH--NAELDLLYIAPERLISASFLERLQEC----HISLFAIDEAHCISQWGHDFRPEYAA 165
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
LG L++ +IPIIALTATA+ +QDI V+K N K + S R N+ Y V+
Sbjct: 166 LGLLKEHFP-TIPIIALTATADKQTRQDI--VVKLNYTPKKYIASFNRPNIHYKVVPK-- 220
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----------RKVNKH 327
++ + +F++ GIIYC TR LA+ L+ ++
Sbjct: 221 -TNAAKQLNQFLQSV------EQQSGIIYCGTRNSVESLAEKLQDMGFKARAYHAGLSHK 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
ER VQ F I+++ ATI+FGMGID+ NVRFV H +P +I YYQE+GRAGRDGL
Sbjct: 274 ERKEVQNLFRYDRIDIVVATIAFGMGIDKPNVRFVAHHDLPKNIEGYYQETGRAGRDGLP 333
Query: 388 SYC-RIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLE--YCEQGYFLVILVFPC 444
+ +Y + S + ++I T +R K + L+ E +C + L PC
Sbjct: 334 AQALLLYDAADSARLRSWIINTPLDEQRRVETNKLNHMLAFAEASHCRRQILLRYFDEPC 393
>gi|290513154|ref|ZP_06552516.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
gi|289774365|gb|EFD82371.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. 1_1_55]
Length = 618
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 219/438 (50%), Gaps = 55/438 (12%)
Query: 18 SLTGNQQDRKGGKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTG 75
S N + +V QE AK L+ FG+ F+ ++ I +L D V MPTG
Sbjct: 3 SFQANGVNVAQAEVLNQESLAKQVLQETFGYQQFRPG--QETIIETVLEGRDCLVVMPTG 60
Query: 76 AVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSD 135
+ V A ++ G ++ ++S +D ++ ++
Sbjct: 61 GGKSLCYQVPA-----------LVMGG--------LTVVVSPLISLMKDQVDQLL---AN 98
Query: 136 LYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAY 195
+ S Q++ + + ++ R +++LLY+ PER + ++F L+HL +N LA
Sbjct: 99 GVAAACLNSTQSREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAM 152
Query: 196 IVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKP 255
+ VDEAHC+S+WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P
Sbjct: 153 LAVDEAHCISQWGHDFRPEYAALGQLRQRL-PQIPFMALTATADDTTRRDIVRLLGLNDP 211
Query: 256 YKVFKTSTF-RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTT 314
+ + S+F R N+ Y +L + + + + + + K+ GIIYC +R
Sbjct: 212 --LIQVSSFDRPNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVE 260
Query: 315 DLADALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVH 364
D A L+ + + R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH
Sbjct: 261 DTAARLQSRGISAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVH 320
Query: 365 WGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNY 424
+ +P +I +YYQE+GRAGRDGL + +++ L ++ + + +E N
Sbjct: 321 FDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNA 380
Query: 425 LSMLEYCEQGYFLVILVF 442
+ + LV+L +
Sbjct: 381 MGAFAEAQTCRRLVLLNY 398
>gi|238789392|ref|ZP_04633178.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
gi|238722535|gb|EEQ14189.1| ATP-dependent DNA helicase recQ [Yersinia frederiksenii ATCC 33641]
Length = 610
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 218/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 6 VINRELLAEQVLRDTFGYQQFRPGQQE--IINATLAGQDCLVVMPTGG----GKSLCYQI 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP++S + D + G L S QT+
Sbjct: 60 PALVTDGLTLV-----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ A+++ R +IKLLY+ PER V ESF L L ++ + + VDEAHC+S+WG
Sbjct: 102 EQQLAVMDGCR--SGQIKLLYIAPERLVMESF---LDQLHQW-RPGLLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLKQRFPD-LPVIALTATADEATRGDIVRLLNLDQP--LIQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D L + F++ GK GIIYC +R D L+
Sbjct: 213 IRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|37200123|dbj|BAC95951.1| ATP-dependent DNA helicase RecQ [Vibrio vulnificus YJ016]
Length = 625
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 208/397 (52%), Gaps = 51/397 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ +F+ E Q+ I + D V MPTG + + A R PG +
Sbjct: 34 LSQVFGYQTFR-EGQQSVIE-AAVEGKDSLVIMPTGGGKSLCYQIPALVR----PGITLV 87
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S ++ ++ R
Sbjct: 88 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLSRDALLSVYN--R 127
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KL+YV+PER + F L++L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 128 MHAGQLKLVYVSPERVLMRDFIERLENL----PLAMIAVDEAHCISQWGHDFRPEYAALG 183
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+ + +P +ALTATA+ + ++DI+S L N+P+ V+ S R N+ YD++
Sbjct: 184 QLKHHFPH-VPFMALTATADDATRKDILSRLHLNEPH-VYLGSFDRPNIRYDLV------ 235
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I +++ NCGIIYC +R+ L + L ++ ER
Sbjct: 236 EKHKPVSQVIRYL---ESQKGNCGIIYCGSRKKVEMLTEKLCNNHIRAAGYHAGMDADER 292
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R +I ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 293 AYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 352
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
+ + L ++ ++Q+E N +S
Sbjct: 353 AMMLYDPADITWLRRMLDEKDDGPQKQVESHKLNAMS 389
>gi|238750693|ref|ZP_04612192.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
gi|238711083|gb|EEQ03302.1| ATP-dependent DNA helicase recQ [Yersinia rohdei ATCC 43380]
Length = 610
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/430 (31%), Positives = 216/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ Q+ I + L D V MPTG G + +
Sbjct: 6 VINRELLAEQVLRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQI 59
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+ G + +SP++S + D + G L S QT+
Sbjct: 60 PALVTEGLTLV-----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ A+++ R +IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WG
Sbjct: 102 EQQLAVMDGCR--SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+Q + +P+IALTATA+ + + DI+ +L P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLKQRFPD-LPVIALTATADEATRGDIVRLLNLENP--LIQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D L + F++ GK GIIYC +R D L+
Sbjct: 213 IRYTLVEKFKPLDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ ++ R+ VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGLSVAAYHAGLDNERRAHVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L ++ + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEAMLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|260909474|ref|ZP_05916178.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636399|gb|EEX54385.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
Length = 725
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 196/382 (51%), Gaps = 55/382 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSARSRVR 91
LT LK FGFDSFK + Q+ IR+ LL +D FV MPTG + S++ + +
Sbjct: 7 LTEPLKQYFGFDSFKGD-QEAIIRN-LLAGNDTFVLMPTGGGKSLCYQLPSLLMEGTAIV 64
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I P + N V NG ++ YL +K +I +D+ + G TK
Sbjct: 65 ISPLIALMKN-QVDVMNGMSEDGCTAHYLNSSLNKAAIQQVINDVKR------GATK--- 114
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
LLYV PE + LQ + K+++ VDEAHC+SEWGHDF
Sbjct: 115 ---------------LLYVAPESLGKDENVEFLQSI----KVSFYAVDEAHCISEWGHDF 155
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP YR + G + P+IALTATA V+ DI L + + FK+S R NL+Y+
Sbjct: 156 RPEYRNIRPTISRIGQA-PVIALTATATDKVRSDIKKNLGIGEALE-FKSSFNRPNLYYE 213
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRKVNKHE--- 328
V ++ ++ FI++ GK GIIYC +R+ +L+ L+ K E
Sbjct: 214 V--RSKTQEVDRNIIMFIKQHAGK------SGIIYCLSRKKVEELSAILKANNIKAEPYH 265
Query: 329 -------RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+GRA
Sbjct: 266 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 325
Query: 382 GRDGLQSYCRIYHSEHSKKSLE 403
GRDG + C ++S + LE
Sbjct: 326 GRDGGEGLCITFYSNKDLQKLE 347
>gi|145346893|ref|XP_001417916.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578144|gb|ABO96209.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 199/380 (52%), Gaps = 51/380 (13%)
Query: 63 LRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRF 122
+R D FV MPTG + ++ A IL G V I+ S L
Sbjct: 20 VRGEDCFVLMPTGGGKSLCYMLPA------------ILQGGVT--------IVCSPLLSL 59
Query: 123 RDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELRLVKPRIKLLYVTPER-AVTESFH 181
D+ S + ++ + S Q++ + A+L ELR KP I+LLYVTPE+ A + +
Sbjct: 60 IQDQVSHLVKDFNI-PATFLSSAQSQGDAVAVLRELRKRKPTIRLLYVTPEKLASSSTLA 118
Query: 182 YLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPS 241
++ L R L V+DEAHCVS WGHDFRP Y+ LG LR+ N +PI ALTATA +
Sbjct: 119 DIMDQLDRNGLLTRFVIDEAHCVSSWGHDFRPDYKALGSLRKNYPN-VPITALTATATMA 177
Query: 242 VKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANN 301
V+ D++ +LK K K F + R N+ + V+ L D +++F + + ++ NN
Sbjct: 178 VRTDVMKILKIAKTAKSFVVTFNRPNISFTVMPKRDLYD----LEKFAD-WIAQEFGPNN 232
Query: 302 CGIIYCRTREHTTDLADALR----RKVNKH-----------------ERSRVQESFMRGE 340
GI+YC +R+ T ++A AL R+ +H +R VQ +M GE
Sbjct: 233 AGIVYCLSRDETANVAKALNDARLRRQREHLPPGPSAAAYHAGMTDSQRLAVQNKWMSGE 292
Query: 341 INVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCRIYHSEHSKK 400
++V ATI+FGMGID+ NVR+VVH P S+ YQE GRAGRDGL + + ++
Sbjct: 293 VSVCCATIAFGMGIDKPNVRWVVHHCAPKSLEGLYQEVGRAGRDGLPAKGVVLYARGDIG 352
Query: 401 SLEYVIKTDTS--TKREQLE 418
+E +IK +KR +LE
Sbjct: 353 RIERLIKMPQKGVSKRSRLE 372
>gi|344231853|gb|EGV63732.1| ATP-dependent DNA helicase [Candida tenuis ATCC 10573]
Length = 1031
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 222/425 (52%), Gaps = 42/425 (9%)
Query: 23 QQDR-KGGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVG 81
QQ+R G + +E+ + L F +F+ Q +AI LL+ D+FV MPTG G
Sbjct: 329 QQNRYPGCEPYIKEIYSVLNKKFKLQNFRSN-QFEAIIS-LLQGRDVFVLMPTGG----G 382
Query: 82 SVVSARSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLEL 141
+ + I GA RN ++ ++S +D + ++ + +
Sbjct: 383 KSLCYQLPSLIKIGA----------RNQGVTIVISPLISLMQDQVQHL---KNKNIKAGM 429
Query: 142 IVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTES-FHYLLQHLVRYNKLAYIVVDE 200
I S +E K I++ + + + L+Y++PE + + +++ L +L ++VDE
Sbjct: 430 INSKIEYSEKKQIIDLFKTAQ--LDLVYLSPEMVNSSAQIQRIIKQLYDTKQLNKVIVDE 487
Query: 201 AHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFK 260
AHC+S WGHDFRP Y+ + RQ + IPI+ALTATA V+ DI+ +L P KVFK
Sbjct: 488 AHCISSWGHDFRPDYKAMSIFRQNYPD-IPIMALTATANDKVRLDILHLLNMKSP-KVFK 545
Query: 261 TSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
S R NL+Y++ +K + V++ + L K N GIIYC +++ ++ L
Sbjct: 546 QSFNRINLYYEI----RMKKA-GFVEDIRDTILAK--YKNQTGIIYCHSKQSCEQISMKL 598
Query: 321 RR----------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ ++ +R VQ+S+ + + VI ATI+FGMGID+ NVRFV+H +P +
Sbjct: 599 NQFGIESAFYHAGMSTEDRFEVQDSWQQERLRVICATIAFGMGIDKPNVRFVIHSFLPRN 658
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
+ YYQE+GRAGRDGL S C +Y+S ++L+ +I+ D + + +++Y
Sbjct: 659 LEGYYQETGRAGRDGLHSDCIMYYSYKDARNLQLMIQKDEEYNQATKDNHLSKLRQVIQY 718
Query: 431 CEQGY 435
CE +
Sbjct: 719 CENNH 723
>gi|153809072|ref|ZP_01961740.1| hypothetical protein BACCAC_03380 [Bacteroides caccae ATCC 43185]
gi|423216745|ref|ZP_17203241.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149128405|gb|EDM19624.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392629275|gb|EIY23282.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 726
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/407 (33%), Positives = 205/407 (50%), Gaps = 68/407 (16%)
Query: 28 GGKVSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSV 83
GK++ L +LK FGF+ FK ++AI LL D FV MPTG + S+
Sbjct: 2 AGKIN---LINELKKCFGFNKFKG--NQEAIIQNLLDGRDTFVLMPTGGGKSLCYQLPSL 56
Query: 84 VSARSRVRIPPGADFILNG-----NVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQ 138
+ + + I P + N N +G I SS +K +I +SD
Sbjct: 57 LMEGTAIVISPLIALMKNQVDAMRNFSEEDGIAHFINSSL------NKGAIDQVKSD--- 107
Query: 139 LELIVSGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVV 198
I++G+TK LLYV PE E L+ + K+++ V
Sbjct: 108 ---ILAGKTK------------------LLYVAPESLTKEENVDFLRSV----KISFYAV 142
Query: 199 DEAHCVSEWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKV 258
DEAHC+SEWGHDFRP YRR+ + G + P+IALTATA P V+ DI L +V
Sbjct: 143 DEAHCISEWGHDFRPEYRRIRPIINEIGKA-PLIALTATATPKVQHDIQKNLGMVDA-QV 200
Query: 259 FKTSTFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD 318
FK+S R NL+Y+V + A++ I K + N GI+YC +R+ +LA+
Sbjct: 201 FKSSFNRPNLYYEV------RAKTANIDRDIIKFI--KNNPEKSGIVYCLSRKRVEELAE 252
Query: 319 ALRRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMP 368
L+ ++ R++ Q+ F+ ++ VI ATI+FGMGID+ +VRFV+H+ +P
Sbjct: 253 ILQANGINARPYHAGMDSLTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYDIP 312
Query: 369 SSIPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
S+ YYQE+GRAGRDG + C +++ + LE ++ ++E
Sbjct: 313 KSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQE 359
>gi|403418217|emb|CCM04917.1| predicted protein [Fibroporia radiculosa]
Length = 842
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/379 (35%), Positives = 195/379 (51%), Gaps = 53/379 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTG---AVSLVGSVVSARSRVRIPPGA 96
L FG +K ++K + ++ D+FV PTG ++ ++AR V +
Sbjct: 45 LTTTFGHTEYKG--KQKEVVEAAVQGLDVFVLAPTGMGKSLCFQVPALAARHGVTV---- 98
Query: 97 DFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILE 156
+SP+L+ K + RS + I S + + ILE
Sbjct: 99 -------------VVSPLLALM-------KNQVAKLRSVYVSVAAITSETSHEDRIYILE 138
Query: 157 ELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYR 216
+L P I+LLYV+PE+ T F+ LL L +L +VVDEAHC+SEWGHDFR YR
Sbjct: 139 DLNSGHPEIRLLYVSPEKFCTPEFNKLLGRLDERAQLNRLVVDEAHCISEWGHDFREEYR 198
Query: 217 RLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKT--STFRSNLFYDVI 273
RLG R +F IPI+ALTATA P V++DI+ L + ++FK R+NLFY+V
Sbjct: 199 RLGSFRDRFP--YIPIMALTATATPVVQEDIVRSLHMPR-ERLFKVVHPFNRANLFYEVR 255
Query: 274 FDDLLKDSYAHVKEFIE--KCLGKDNKANNCGIIYCRTREHTTDLADALRRK-VNKHERS 330
+ D AH+ + + L + GIIYCRTR +LA LR K +N
Sbjct: 256 YLS-SADPAAHMVDIFDYISNLHHRRGRPSSGIIYCRTRATCDNLAHYLRGKGLNARPYH 314
Query: 331 RVQESFM--------------RGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQ 376
R S + +G I+V+ ATI+FGMGID+ +VR+++H+ +P S YYQ
Sbjct: 315 RGIGSIVLDRTLAEWERGGSGQGGIDVVCATIAFGMGIDKADVRYILHYDLPKSFEGYYQ 374
Query: 377 ESGRAGRDGLQSYCRIYHS 395
E+GR GRDGL S C +++S
Sbjct: 375 ETGRGGRDGLPSKCILFYS 393
>gi|386743723|ref|YP_006216902.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
gi|384480416|gb|AFH94211.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
Length = 608
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 215/417 (51%), Gaps = 59/417 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L FG+ SF+ Q+ IR IL D V MPTG G + + + G +
Sbjct: 17 LNNTFGYQSFR-PGQEAVIRAIL-DNRDCLVLMPTGG----GKSLCYQVPALVKEGVTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R + + S QT E + ++
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRLHGIKAACLNSSQTAQEQRDVMA--L 110
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLYV PER +T+ Y L L +N ++ + VDEAHCVS+WGHDFRP YR +G
Sbjct: 111 CAEGAIKLLYVAPERLLTD---YFLSQLSSWN-ISLLAVDEAHCVSQWGHDFRPEYRAIG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+LRQ + +PI+ALTATA+ + + DI+ +L + P + + S+F R N+ Y ++
Sbjct: 167 QLRQHFPD-VPIMALTATADETTRADIVRLLALHDP--LIQISSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKE---FIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + + FI+ GK GI+YC +R + A+ L+++ ++
Sbjct: 219 -EKYKPLDQLWFFIKAQKGK------AGIVYCNSRSKVEETAERLQKRGLSVAAYHAGLD 271
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R VQ++F++ + ++ AT++FGMGI++ NVRFV H+ +P +I AYYQE+GRAGRDG
Sbjct: 272 NQQREWVQDAFLKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDG 331
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ +++ L ++ + ++ +E N ++ + LV+L +
Sbjct: 332 VEAEAVLFYDPADMAWLRRCLEEKPAGLQQDIERHKLNAIAAFAEAQTCRRLVLLNY 388
>gi|297581635|ref|ZP_06943557.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
gi|297534042|gb|EFH72881.1| ATP-dependent DNA helicase RecQ [Vibrio cholerae RC385]
Length = 620
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ F+ Q+ + L D V MPTG G + + + G +
Sbjct: 29 LHEVFGYQQFRVGQQE--VIEAALAGCDSLVIMPTGG----GKSLCYQIPALVLEGVTLV 82
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S + E AI R
Sbjct: 83 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTLAREELIAIYN--R 122
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L HL LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 123 MHAGQLKLLYVSPERVLTAEFIERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLG 178
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q N +P++ALTATA+ + + DI+ L+ N+P++ + S R N+ Y +L
Sbjct: 179 QLKQRFPN-VPVMALTATADDATRHDIMQRLQLNEPHQ-YLGSFDRPNIRY------MLV 230
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKHER 329
+ + V + I + + CGIIYC +R+ L + L ++ ER
Sbjct: 231 EKHKPVSQVIRYL---ETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADER 287
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY E+GRAGRDGL +
Sbjct: 288 AWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYHETGRAGRDGLPAE 347
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ ++Q+E
Sbjct: 348 AMMLYDPADMNWLRRMLDEKPDGAQKQVE 376
>gi|428781470|ref|YP_007173256.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
gi|428695749|gb|AFZ51899.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
Length = 713
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/407 (31%), Positives = 195/407 (47%), Gaps = 49/407 (12%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ QK I+ + D+ V MPTG G + + + PG
Sbjct: 6 LETSLKQYFGYDQFRPG-QKDVIQAVC-NQQDVLVVMPTGG----GKSLCYQLPALLKPG 59
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ +SP+++ D+ + + + N+A
Sbjct: 60 LAVV-----------VSPLIA-----LMQDQVESLQKNG----IAATFLNSSLNPNEARS 99
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
L +++ IKLLY+ PE+ V+ LQ + L+ VDEAHC+SEWGHDFRP Y
Sbjct: 100 RRLSILQGNIKLLYLAPEKLVSSGAKKFLQAVSEKQGLSLFAVDEAHCISEWGHDFRPEY 159
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
R+L LRQ +P IALTATA V+ DII LK KP K+ TS R NL+Y+V
Sbjct: 160 RQLETLRQ-QFPEVPTIALTATATEQVRGDIIRQLKL-KPPKIQITSFDRPNLYYEV--Q 215
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ Y + +FI N GI+YC +R ++A L + +
Sbjct: 216 PKQRQHYNQLFKFIRH-------QNGSGIVYCLSRRRVEEVAFRLEKDGISALPYHAGMT 268
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
R Q F+R ++ V+ ATI+FGMGID+ ++RFV H+ +P ++ YYQE+GRAGRD
Sbjct: 269 DGNRRDYQTRFLRDDVQVMVATIAFGMGIDKPDIRFVAHYDLPRNLENYYQEAGRAGRDN 328
Query: 386 LQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+ C + ++EY+I K ++ L + M++Y E
Sbjct: 329 EPAQCLLLFGAKDIHTIEYLISQKEEEKSQR--LARQQLRKMIDYAE 373
>gi|120597203|ref|YP_961777.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|146291576|ref|YP_001182000.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
gi|120557296|gb|ABM23223.1| ATP-dependent DNA helicase RecQ [Shewanella sp. W3-18-1]
gi|145563266|gb|ABP74201.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens CN-32]
Length = 607
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 213/405 (52%), Gaps = 54/405 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+ L+ +L +FG+ F+ + Q++ I I D V MPTG + + A
Sbjct: 10 DDPLSQRLAQVFGYRDFR-DGQREVIERIC-GGQDCLVIMPTGGGKSLCYQLPA------ 61
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTEN 151
++NG I+ ++S +D S++ TG + Y + S + ++
Sbjct: 62 -----LMMNG--------ITIVVSPLISLMKDQVDSLLQTGVAAAY----LNSSLPREQS 104
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+L +LR +KLLYV+PER +T F +Q L +LA +DEAHC+S+WGHDF
Sbjct: 105 AEVLRQLR--HGELKLLYVSPERLLTADFIERMQSL----QLAMFAIDEAHCISQWGHDF 158
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP Y LG+L+Q +P++ALTATA+ + +Q I L + PY++ +S R N+ Y
Sbjct: 159 RPEYAALGQLKQLF-PYVPMMALTATADQATRQSICERLGID-PYRLL-SSFDRPNIRYT 215
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD----------ALR 321
V ++ ++ F+ + + + GIIYC +R ++AD A
Sbjct: 216 VAEK---LNAANQLRHFLLQ------QNGSSGIIYCSSRRRVDEVADRLCLQGFNAKAYH 266
Query: 322 RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ + +R VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+GRA
Sbjct: 267 AGMTQEDRGAVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRA 326
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
GRDGL + + + ++I+ ++Q+E N ++
Sbjct: 327 GRDGLDAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|455737381|ref|YP_007503647.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp.
morganii KT]
gi|455418944|gb|AGG29274.1| ATP-dependent DNA helicase RecQ [Morganella morganii subsp.
morganii KT]
Length = 608
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 210/416 (50%), Gaps = 53/416 (12%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
A L+ +FG+ F+ + I + D V MPTG G + + + PG
Sbjct: 15 AILRQVFGYQQFRAG--QSDIIDTVTGGRDCLVVMPTGG----GKSLCYQIPALMLPGLT 68
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
+ +SP++S ++ + D+ ++ + + S QT E + +LE
Sbjct: 69 VV-----------VSPLIS--LMKDQVDQLRLLG-----VEAGYLNSAQTAQEQQKVLEG 110
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
RIKLLYV PER + SF LQ + + + VDEAHC+S+WGHDFRP Y
Sbjct: 111 CH--NNRIKLLYVAPERLLMSSFIRQLQQW----QPSLLAVDEAHCISQWGHDFRPEYCA 164
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDD 276
+GELRQ +P+IALTATA+ + + DI S L+ + P + S+F R N+ Y ++
Sbjct: 165 IGELRQHL-PGVPVIALTATADNTTRSDICSRLRLSDP--LIHISSFDRPNIRYTLV--- 218
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
+ Y K F + + + CGIIYC +R D+A L+++ ++
Sbjct: 219 ---EKY---KAFDQLWMFVRGQKGQCGIIYCNSRNKVEDVAARLQKRGLSVAAYHAGLDN 272
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R VQ++F++ + V+ AT++FGMGI++ NVRFV H+ +P +I +YYQE+GRAGRDG+
Sbjct: 273 SQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPRNIESYYQETGRAGRDGV 332
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L + + ++ +E N + + LV+L +
Sbjct: 333 SAEAVLFYDPADMAWLRRCLDEKPAGPQKDIEQHKLNAMGAFAQAQTCRRLVLLNY 388
>gi|238892418|ref|YP_002917152.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|365144577|ref|ZP_09348793.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|378976322|ref|YP_005224463.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|386037440|ref|YP_005957353.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|402783066|ref|YP_006638612.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419976110|ref|ZP_14491512.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419981887|ref|ZP_14497157.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987417|ref|ZP_14502537.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419992987|ref|ZP_14507936.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419999205|ref|ZP_14513983.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004974|ref|ZP_14519604.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010567|ref|ZP_14525038.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420016807|ref|ZP_14531094.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022207|ref|ZP_14536378.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027870|ref|ZP_14541857.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033622|ref|ZP_14547424.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039320|ref|ZP_14552956.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420045195|ref|ZP_14558666.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051125|ref|ZP_14564416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056758|ref|ZP_14569910.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420061820|ref|ZP_14574803.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420068079|ref|ZP_14580864.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073504|ref|ZP_14586129.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420079309|ref|ZP_14591756.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420085306|ref|ZP_14597536.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421908873|ref|ZP_16338705.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421917229|ref|ZP_16346791.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424833268|ref|ZP_18257996.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424930893|ref|ZP_18349265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425084062|ref|ZP_18487159.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425094091|ref|ZP_18497174.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428151187|ref|ZP_18998930.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428934219|ref|ZP_19007747.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|428939135|ref|ZP_19012250.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|238544734|dbj|BAH61085.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339764568|gb|AEK00789.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae KCTC 2242]
gi|363648000|gb|EHL87187.1| ATP-dependent DNA helicase recQ [Klebsiella sp. 4_1_44FAA]
gi|364515733|gb|AEW58861.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397341372|gb|EJJ34552.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397342014|gb|EJJ35183.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397344702|gb|EJJ37833.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397358598|gb|EJJ51314.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397359601|gb|EJJ52294.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363627|gb|EJJ56265.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397374431|gb|EJJ66767.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397378264|gb|EJJ70477.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397385030|gb|EJJ77135.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397392581|gb|EJJ84369.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397394580|gb|EJJ86306.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403296|gb|EJJ94873.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397409845|gb|EJK01145.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410215|gb|EJK01502.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420262|gb|EJK11348.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397427007|gb|EJK17798.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397429873|gb|EJK20579.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397437837|gb|EJK28380.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397443829|gb|EJK34130.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397449321|gb|EJK39461.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402543905|gb|AFQ68054.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405597672|gb|EKB70935.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610253|gb|EKB83062.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805080|gb|EKF76331.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|410117240|emb|CCM81330.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410120477|emb|CCM89416.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414710718|emb|CCN32422.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426303386|gb|EKV65559.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae JHCK1]
gi|426304490|gb|EKV66633.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae VA360]
gi|427538860|emb|CCM95068.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 608
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 215/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETALEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRM-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|164655522|ref|XP_001728890.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
gi|159102778|gb|EDP41676.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
Length = 841
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 201/413 (48%), Gaps = 41/413 (9%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVR 91
+ ++ L +F F+ + Q +AI + L D+F MPTG SL + S
Sbjct: 179 DDQVRHSLHHIFLLKEFRAD-QLEAI-NATLSGRDVFCLMPTGGGKSLCYQLPST----- 231
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
I G +SP+L+ + + + S++ R D+ + I + +
Sbjct: 232 -------ITLGRTNGLTVVVSPLLALIHNQVK----SLL--RKDVPAMA-ITGDMSDADR 277
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESF-HYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+ EL ++LLYVTPE LLQHL + ++LA V+DEAHCV +WGHD
Sbjct: 278 RYASSELLRKNINVRLLYVTPEFISKSRLASQLLQHLYQTHQLARFVIDEAHCVDQWGHD 337
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y RL LR+ T ++PI+ALTATA Q I L V + S R NL Y
Sbjct: 338 FRPDYVRLNLLRK-TYPTVPIMALTATARIDTVQSIQQSLGMRNAL-VLRQSFNRPNLTY 395
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
V + + I+K + AN CGIIYC +R +++ L K
Sbjct: 396 KVCPKMRGSATLETIAAIIQK-----HHANECGIIYCLSRRDCENVSTDLGNKYGIQARH 450
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+N ++ R+QE + G VI ATI+FGMGID+ +VRFV+H MP S+ YYQE+G
Sbjct: 451 FHAGLNIEDKLRIQEGWEAGTFKVIVATIAFGMGIDKADVRFVIHHSMPKSLEGYYQETG 510
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG S C ++ S + LE +I EQ L+ K+ + +CE
Sbjct: 511 RAGRDGKWSDCILFWSMEDSRKLEAMIDESPDASAEQKRLQIKSLYQVRTFCE 563
>gi|354595778|ref|ZP_09013795.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
gi|353673713|gb|EHD19746.1| ATP-dependent DNA helicase RecQ [Brenneria sp. EniD312]
Length = 610
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 179/311 (57%), Gaps = 31/311 (9%)
Query: 144 SGQTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHC 203
S QT+ + ++ R +IKLLY+ PER T+SF L HL+ + + + I VDEAHC
Sbjct: 97 STQTREQQHEVMAGCR--SGQIKLLYIAPERLTTDSF---LDHLIHW-RPSLIAVDEAHC 150
Query: 204 VSEWGHDFRPTYRRLGELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTS 262
+S+WGHDFRP YR LG+++Q F G +P+IALTATA+ + + DI+ +L P + + S
Sbjct: 151 ISQWGHDFRPEYRALGQVKQHFPG--LPVIALTATADETTRSDIVRLLDLQSP--LVQIS 206
Query: 263 TF-RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR 321
+F R N+ Y ++ + + + + G+ K+ GIIYC +R D++ L+
Sbjct: 207 SFDRPNIRYTLV------EKFKPLDQLWMFVQGQRGKS---GIIYCNSRAKVEDISARLQ 257
Query: 322 RK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSI 371
+ ++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 258 SRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNI 317
Query: 372 PAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
+YYQE+GRAGRDGL + +++ L ++ + ++ +E N +
Sbjct: 318 ESYYQETGRAGRDGLAAEAALFYDPADMAWLRRCLEEKPAGQQLDIERHKLNAMGAFAEA 377
Query: 432 EQGYFLVILVF 442
+ LV+L +
Sbjct: 378 QTCRRLVLLNY 388
>gi|409195579|ref|ZP_11224242.1| putative ATP-dependent DNA helicase [Marinilabilia salmonicolor JCM
21150]
Length = 726
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 200/379 (52%), Gaps = 48/379 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L++ LK FGFD+FK ++AI +L +D FV MPTG +S P
Sbjct: 6 DLSSYLKRHFGFDTFKG--NQEAIIQNVLDGNDTFVLMPTGG---------GKSLCYQLP 54
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAI 154
IL+G + I+S ++ ++ D + S TK+ + +
Sbjct: 55 A--LILDGT--------AIIISPLIALMKNQVDAMRNFSEDDGIAHFLNSSLTKSAIQQV 104
Query: 155 LEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPT 214
++ ++ + +LLYV PE E L+ + K+++ VDEAHC+SEWGHDFRP
Sbjct: 105 KDD--VISGKTRLLYVAPESLTKEDNIQFLKQV----KISFYAVDEAHCISEWGHDFRPE 158
Query: 215 YRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIF 274
YRR+ + G++ P+IALTATA P V+ DI L + V+K+S R+NLFY+V
Sbjct: 159 YRRIRPIISEIGDA-PVIALTATATPKVQHDIQKNLGMLNAH-VYKSSFNRANLFYEV-- 214
Query: 275 DDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKV 324
+ +E I+ + K+N + IIYC +R+ +LA+ L +
Sbjct: 215 ----RPKVNATREIIK--ILKENTGKSA-IIYCLSRKKVEELAETLVVNGIKALPYHAGM 267
Query: 325 NKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRD 384
+ RS Q+ F+ EI+VI ATI+FGMGID+ +VR V+H+ +P S+ YYQE+GRAGRD
Sbjct: 268 DAATRSGNQDKFLMEEIDVIVATIAFGMGIDKPDVRIVIHYDIPKSLEGYYQETGRAGRD 327
Query: 385 GLQSYCRIYHSEHSKKSLE 403
G + C ++S + LE
Sbjct: 328 GGEGRCIAFYSYKDIQKLE 346
>gi|283787504|ref|YP_003367369.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
gi|282950958|emb|CBG90635.1| ATP-dependent DNA helicase [Citrobacter rodentium ICC168]
Length = 609
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++AI ++ D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRP--GQEAIIDTVMSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG ++ ++S +D ++ ++ + S QT+ + ++ R
Sbjct: 64 LNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQTREQQLEVMAGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N A + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --SGKIRLLYIAPERLMLDNF---LEHLAHWNP-ALLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + + DI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--ALPFMALTATADETTRLDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ + + H
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSRGLSAAAYHAGLENH 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|425078981|ref|ZP_18482083.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084628|ref|ZP_18487721.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405589261|gb|EKB62831.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608866|gb|EKB81789.1| ATP-dependent DNA helicase recQ [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 608
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 215/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETALEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRI-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|440289627|ref|YP_007342392.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
strain FGI 57]
gi|440049149|gb|AGB80207.1| ATP-dependent DNA helicase RecQ [Enterobacteriaceae bacterium
strain FGI 57]
Length = 609
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 218/427 (51%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I +L D V MPTG + + A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQENIIDTVLEGRDCLVVMPTGGGKSLCYQIPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ I S Q
Sbjct: 62 -----------LVLNG--------LTVVVSPLISLMKDQVDQLI---ANGVAAACINSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLAHWNPV-MLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ ++P +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQ-RFPALPFMALTATADDTTRRDIVRLLGLNDP--LIQISSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAGAYHAGLDNAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|323343308|ref|ZP_08083535.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
gi|323095127|gb|EFZ37701.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
Length = 725
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 198/384 (51%), Gaps = 49/384 (12%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
V E L KLK FGFD FK + Q+ IR+ LL D FV MPTG G + +
Sbjct: 2 VKEVNLIEKLKHYFGFDKFKGD-QEAIIRN-LLAGKDTFVLMPTGG----GKSLCYQLPS 55
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQL-ELIVSGQTKT 149
I G + ISP+++ ++ +V G S+ + + S K
Sbjct: 56 LIMEGTAIV-----------ISPLIA-----LMKNQVDVVNGMSEEEGVAHYLNSSLNKA 99
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ +++++R R KLLYV PE E L+ + +++ +DEAHC+SEWGH
Sbjct: 100 AIQQVMDDVR--NGRTKLLYVAPESLNKEENVEFLRGV----NISFYAIDEAHCISEWGH 153
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP YR + GN+ P+IALTATA V+ DI L + K FK+S R NL+
Sbjct: 154 DFRPEYRNIRPTINKIGNA-PVIALTATATDKVRTDIKKSLCITEA-KEFKSSFNRPNLY 211
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL--------- 320
Y+V D V +FI++ K GIIYC +R+ +LA L
Sbjct: 212 YEV--RQKSNDIDRQVIKFIKQHPCK------SGIIYCLSRKKVEELAAILLANEIKAAP 263
Query: 321 -RRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ RS+ Q+ F+ I+VI ATI+FGMGID+ +VRFV+H+ +P S+ YYQE+G
Sbjct: 264 YHAGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETG 323
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLE 403
RAGRDG + C ++++ + LE
Sbjct: 324 RAGRDGGEGICIAFYAQKDLQKLE 347
>gi|206578880|ref|YP_002241119.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
gi|206567938|gb|ACI09714.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae 342]
Length = 608
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRM-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 216/416 (51%), Gaps = 49/416 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA-VSLVGSVVSARSRVRI 92
QE+ LK F F+ Q +AI L D F+ MPTG SL + S
Sbjct: 559 QEVRKVLKDRFHLRGFRPN-QLEAI-DATLAGKDTFILMPTGGGKSLCYQLPS------- 609
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENK 152
+ G+ ISP+LS +D+ S + L +++G T E K
Sbjct: 610 -----VVTGGSTTGVTIVISPLLS-----LMEDQVSHL---QKLKVKAFMINGDTNPEEK 656
Query: 153 A-ILEELRLVKPR-IKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ I+ +L +++LY+TPE + +++ L+ L N+LA +V+DEAHCVS+WGH
Sbjct: 657 SWIMSQLTNAGGEGMEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGH 716
Query: 210 DFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNL 268
DFRP Y+ LGE+R +F G +P++ALTATA +VK D++ LK +VF S R NL
Sbjct: 717 DFRPDYKELGEVRARFPG--VPVMALTATATENVKVDVMHNLKITD-CEVFLQSFNRPNL 773
Query: 269 FYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----- 323
Y+V + A + E I N CGIIYC +R+ A+ LR K
Sbjct: 774 TYEVRSKGKNDEVLASMAETISSSY-----RNQCGIIYCLSRKTCEKTAEDLRTKYRLKA 828
Query: 324 ------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQE 377
++ ++ Q ++ G +++I ATI+FGMGID+ +VRFV+H +P S+ YYQE
Sbjct: 829 QAYHAGMSATAKTEAQRNWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQE 888
Query: 378 SGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYL-SMLEYCE 432
+GRAGRDG +S C +Y +L+ +I D Q + + K L +++++CE
Sbjct: 889 TGRAGRDGKRSGCYLYFGYKDTATLKRMI--DAGDGNGQQKGRQKQMLRNVVQFCE 942
>gi|419765474|ref|ZP_14291711.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397741738|gb|EJK88959.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 608
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 215/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETALEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRM-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 191/378 (50%), Gaps = 51/378 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SFK QK+ I IL D+F +MPTG + + A +
Sbjct: 8 LKSVFGYSSFKAN-QKEVINAILA-GRDLFAAMPTGGGKSLCYQIPA-----------LL 54
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+G ++ ++S +D + ++ + ++++ A R
Sbjct: 55 FDG--------LTVVVSPLIALMKDQVDAALS-----LGIPAAFLNSSQSQEDATETYRR 101
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L + IKLLY++PER + F + L +N ++ VDEAHC+SEWGHDFRP Y L
Sbjct: 102 LYRGEIKLLYLSPERLAVDGF---TERLAAFN-VSLFAVDEAHCLSEWGHDFRPDYLALA 157
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+LR ++PI A TATA V++DII +L+ P+ + + S R LFY V+
Sbjct: 158 QLRT-AFPTVPIAAFTATATVRVQEDIIRLLRLEDPF-ILRASFNRKELFYQVL------ 209
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----------KVNKHER 329
V I + +G + GI+Y +R+ T D L + ++K ER
Sbjct: 210 -PKTEVLSQIAQYIGA--HPDQSGIVYRLSRKDTDKTVDYLGKLGIRALPYHAGMDKDER 266
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+R QE F ++ VI AT +FGMGID+ N+R+V+H +P S+ YYQE+GRAGRDGL+S
Sbjct: 267 ARNQERFNNDDVQVIVATTAFGMGIDKNNIRYVIHGDLPKSMEGYYQETGRAGRDGLESQ 326
Query: 390 CRIYHSEHSKKSLEYVIK 407
C ++ L Y I+
Sbjct: 327 CILFFGTADIARLNYFIR 344
>gi|295133854|ref|YP_003584530.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981869|gb|ADF52334.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 702
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 198/376 (52%), Gaps = 55/376 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ +Q+L LK FG+DSF+ LQ+K I+ I D V MPTG G + +
Sbjct: 1 MEKQQLLNTLKEYFGYDSFR-PLQEKIIQSIF-DGKDNLVIMPTGG----GKSICYQLPA 54
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ P + ISP+++ K + +++ + E + S Q +
Sbjct: 55 ILLPKLTIV-----------ISPLIALM-------KDQVDGLKANGIKAEFLNSSQQVAD 96
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
++I + ++ K +KLLYV PE S L + L N ++ I +DEAHC+S WGHD
Sbjct: 97 QESIFQ--KIDKNELKLLYVAPE-----SLQILDRFLTEEN-ISLIAIDEAHCISSWGHD 148
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLF 269
FRP Y +LG L++ N+ PIIALTATA+ + + DI L N P S+F R NL
Sbjct: 149 FRPAYTQLGYLKKRFSNT-PIIALTATADKATRHDICQQL--NIPDAKKHISSFDRKNLS 205
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
+V +K F + ++ + GIIYC +R++T +LA+ L++K
Sbjct: 206 LEV---------RQGIKRFEQIIKFIKSRPSESGIIYCLSRKNTEELAEKLQQKGLDAKA 256
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER +Q+ F+ + +I AT++FGMGID+ N+R+V+H+ MP ++ YYQE G
Sbjct: 257 YHAGLKHEERESIQDDFINDKTEIICATVAFGMGIDKSNIRWVIHYNMPKNLEGYYQEIG 316
Query: 380 RAGRDGLQSYCRIYHS 395
RAGRDGL S ++HS
Sbjct: 317 RAGRDGLSSDTLLFHS 332
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 213/429 (49%), Gaps = 72/429 (16%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR-VRI 92
+EL A K +FG SF+ ++ I + + +D+FV MPTG G ++ +S+ V I
Sbjct: 423 KELEANNKRVFGNRSFR--PNQREIINATMSGNDVFVLMPTGG----GKSLTYQSQNVSI 476
Query: 93 PPGADFILNGNVR--SRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
F + ++ RN W +S+ YL + +E
Sbjct: 477 -----FEVGTGIKRVGRNDWRKANISAAYLS----------------------ASMEWSE 509
Query: 151 NKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ IL EL KLLYVTPE+ A +++ L++L L+ IV+DEAHCVS+WGH
Sbjct: 510 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 569
Query: 210 DFRPTYR-----RLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF 264
DFRP Y+ LG L+Q + P++ALTATA SVK+D++ VL +F+ S
Sbjct: 570 DFRPDYQFFIHQHLGILKQKFPQT-PVLALTATATASVKEDVVQVLGLANCI-IFRQSFN 627
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-- 322
R NL Y V K + FI N CGIIYC +R +A LR
Sbjct: 628 RPNLRYFVW--PKTKKCLEDIHNFIHA-----NHNKECGIIYCLSRMDCEKVAAKLREYG 680
Query: 323 --------KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
++ +R+ +Q+ + + IN+I AT++FGMGI++ +VRFV+H +P SI Y
Sbjct: 681 HTASHYHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGY 740
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT-----------DTSTKREQLELKFKN 423
+QE GRAGRD S C ++++ L++++ S++ + LE +N
Sbjct: 741 HQECGRAGRDSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGGSSQEQALETHKEN 800
Query: 424 YLSMLEYCE 432
L M+ YCE
Sbjct: 801 LLRMVSYCE 809
>gi|325298909|ref|YP_004258826.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324318462|gb|ADY36353.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 606
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/404 (33%), Positives = 210/404 (51%), Gaps = 56/404 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK+ FG+ SF+ LQ++ I +L+ D V MPTG G + + + G +
Sbjct: 5 LKSYFGYTSFR-PLQEEII-SCVLQKKDTLVLMPTGG----GKSLCYQIPALLTEGTAIV 58
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + + + + R+ + S +T N I E R
Sbjct: 59 -----------VSPLISLMKDQVEALQNNGIIARA-------LNSNNDETANANIRFECR 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ R+KLLY++PER + E +YLL+ + ++ +DEAHC+S+WGHDFRP Y +L
Sbjct: 101 --QGRVKLLYISPERLLAE-INYLLKDI----HISLFAIDEAHCISQWGHDFRPEYTQLA 153
Query: 220 ELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
LR QF +PIIALTATA+ ++DI+ L P ++F +S R NL DV
Sbjct: 154 VLREQFP--HVPIIALTATADKITREDIVKQLAMRDP-QIFISSFDRPNLSLDVKRGYQQ 210
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
K+ V EFI + G+ GI+YC +R T +AD L ++
Sbjct: 211 KEKNRAVLEFITRHKGES------GIVYCMSRNTTEKVADMLEEHGVSTAVYHAGLSSTI 264
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R + QE F+ + V+ ATI+FGMGID+ NVR+V+H+ +P SI ++YQE GRAGRDGL S
Sbjct: 265 RDKAQEDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPS 324
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+++S + ++ + +++ Q E+ + M +Y E
Sbjct: 325 DTLLFYS-----FADIIMLSRFASESGQQEVNMEKLKRMQQYAE 363
>gi|222053514|ref|YP_002535876.1| ATP-dependent DNA helicase RecQ [Geobacter daltonii FRC-32]
gi|221562803|gb|ACM18775.1| ATP-dependent DNA helicase RecQ [Geobacter daltonii FRC-32]
Length = 605
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/424 (31%), Positives = 210/424 (49%), Gaps = 61/424 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L +FG+ SF+ Q+ I L+R D FV MPTG + + A R PG +
Sbjct: 9 LLKVFGYKSFRQPQQE--IVEGLIRGEDAFVIMPTGGGKSLCYQIPALHR----PGVAIV 62
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S ++ + D ++ Y L ++ + + +L ++
Sbjct: 63 -----------VSPLIS--LMKDQVDALQANGVKAAFYNSSL-----SEAKARQVLAQMH 104
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ LLYV PER ++E F L+ + K+A +DEAHCVS+WGHDFRP Y +LG
Sbjct: 105 --DDALDLLYVAPERLMSEPFLERLEDV----KVALFAIDEAHCVSQWGHDFRPEYVQLG 158
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
LRQ +P+IALTATA+P + DII L + R N+ Y V
Sbjct: 159 RLRQLF-PQVPLIALTATADPQTRNDIIERLGLGTA-ACYVAGFDRPNIRYLVTEK---H 213
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ ++ F+ + GI+Y +R+ ++A L + + + ER
Sbjct: 214 KPFDQLRSFL-----SSRQPGEPGIVYALSRKRVEEVAARLVQSGVAAAPYHAGLPERER 268
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
SRVQE+F R E+ V+ AT++FGMGID+ N+RFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 269 SRVQEAFQRDELQVVVATVAFGMGIDKSNIRFVVHYDLPKNIESYYQETGRAGRDGLPAE 328
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ---------GYFLVIL 440
+ +I+ T+ +++++EL N +M+ + E GYF L
Sbjct: 329 ALLLFGYGDIAVARGLIENGTNAEQKRIELHKLN--AMVGFAEAVTCRRRVLLGYFGAAL 386
Query: 441 VFPC 444
C
Sbjct: 387 NHDC 390
>gi|387793516|ref|YP_006258581.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379656349|gb|AFD09405.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 705
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 213/404 (52%), Gaps = 57/404 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ LQ+ I+ IL + D V MPTG + V A +
Sbjct: 9 LKEYFGYDEFR-PLQRNIIQSILDK-KDTLVLMPTGGGKSICFQVPA-----------LL 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKTENKAILEEL 158
L+G ISP++S +D ++ + G Y + S Q+ E + ++E+
Sbjct: 56 LDGLCVV----ISPLIS----LMKDQVDALRINGIGAAY----LNSSQSFEEEEVVIEDC 103
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ IKLLY++PE+ + + L R+N + + +DEAHC+S WGHDFRP Y +L
Sbjct: 104 --INGNIKLLYLSPEKLKSS-----IPMLGRFN-IQLLAIDEAHCISSWGHDFRPEYTQL 155
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
L++ + +PI+ALTATA+ ++DII L +KP F S R NL +V
Sbjct: 156 SILKERFSD-VPIVALTATADRVTRKDIIRQLNLHKP-ATFVASFDRPNLNLEVKTGIKT 213
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR-KVNK---------HE 328
+ + +FI +K N GIIYC +R+ T +LA+ LR +VN +
Sbjct: 214 RQKDQEIVQFIH------SKPNQSGIIYCLSRKTTEELAEKLREHQVNAAAYHAGMSADD 267
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R+ QE F+ + V+ AT++FGMGID+ NVR+V+H+ +P +I YYQE GRAGRDGL+S
Sbjct: 268 RNETQEDFINDRVQVVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLES 327
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+Y++ ++ V+ T + + +Q EL + + ++ E
Sbjct: 328 ETILYYN-----LVDIVLLTQFAEQSQQRELNLEKLKRIQQFAE 366
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 214/419 (51%), Gaps = 62/419 (14%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
E+ KL+ +FG DSF+ Q +A+ + L+ D FV MPTG + + A
Sbjct: 582 EMYHKLRHVFGLDSFRPN-QLEAV-NATLQGKDAFVLMPTGGGKSLCYQLPA-------- 631
Query: 95 GADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQ----LELIVSG 145
+ +G +SP++S +L +D K S+ + + Q L ++G
Sbjct: 632 ---IVKSGRTSGTTIVVSPLISLMQDQVEHLLAKDIKASMFSSKGTAEQRRMTFNLFMNG 688
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
L EL + P + V ++A+++ L + KLA IVVDEAHCVS
Sbjct: 689 ---------LLELVYISPEMIKASVQCKKAISK--------LYEHGKLARIVVDEAHCVS 731
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF- 264
WGHDFRP Y+ L +Q + IP+IALTATA V+ DII L+ N P VF +F
Sbjct: 732 NWGHDFRPDYKELSFFKQEYPD-IPMIALTATASEQVRMDIIHNLQLNNP--VFLKQSFN 788
Query: 265 RSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK- 323
R+NLFY V+ + K+S + + I N GIIYC ++ ++ + AL +K
Sbjct: 789 RTNLFYQVLKKE--KNSIFQMCDMIRTKF-----KNQTGIIYCHSK-NSCEQTSALMQKN 840
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ ER +VQ+ + + VI AT++FGMGID+ +VRFV H+ +P ++
Sbjct: 841 GVKCAFYHAGMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEG 900
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
YYQE+GRAGRDG S C +Y+S ++++ +I+ D + E +++YC+
Sbjct: 901 YYQETGRAGRDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCD 959
>gi|288937759|ref|YP_003441818.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
gi|288892468|gb|ADC60786.1| ATP-dependent DNA helicase RecQ [Klebsiella variicola At-22]
Length = 608
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRM-PKIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|114045876|ref|YP_736426.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
gi|113887318|gb|ABI41369.1| ATP-dependent DNA helicase RecQ [Shewanella sp. MR-7]
Length = 607
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 220/407 (54%), Gaps = 54/407 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ + L+ +L +FG+ F+ + Q++ I + D V MPTG G + +
Sbjct: 8 IHDDPLSQRLAQVFGYRDFR-DGQREVIERVC-SGEDCLVIMPTGG----GKSLCYQLPA 61
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKT 149
+ PG + +SP++S +D S++ TG + Y + S Q +
Sbjct: 62 LLMPGITIV-----------VSPLIS----LMKDQVDSLLQTGVNAAY----LNSSQPRE 102
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
++ +L +L + +KLLYV+PER +T F ++ L L+ +DEAHC+S+WGH
Sbjct: 103 QSLEVLRQLH--RGELKLLYVSPERLLTADFIERMRSL----PLSMFAIDEAHCISQWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y LG+L+Q +P++ALTATA+ + +Q+I L N P+K+ +S R N+
Sbjct: 157 DFRPEYAALGQLKQLF-PLVPMMALTATADQATRQNICERLGIN-PFKLL-SSFDRPNIR 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y V + L ++ +++F+ + + + GI+YC +R ++A+ L +
Sbjct: 214 YTVA-EKL--NAANQLRQFLLQ------QNGSSGIVYCSSRRRVDEVAERLTLQGFHAKA 264
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+G
Sbjct: 265 YHAGMTPQERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
RAGRDGL++ + + ++I+ ++Q++ N ++
Sbjct: 325 RAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVDFHKLNTMA 371
>gi|423123017|ref|ZP_17110701.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
gi|376391770|gb|EHT04440.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5246]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 215/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V Q L AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQTLLAKQVLQETFGYQQFRPG--QETIIDTALGGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLSHWN-LAMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRV-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|417664450|ref|ZP_12314029.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
gi|330908124|gb|EGH36643.1| ATP-dependent DNA helicase RecQ [Escherichia coli AA86]
Length = 609
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/424 (30%), Positives = 214/424 (50%), Gaps = 62/424 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDSLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P IALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFIALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF----- 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGR 393
Query: 443 --PC 444
PC
Sbjct: 394 QEPC 397
>gi|126662148|ref|ZP_01733147.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
gi|126625527|gb|EAZ96216.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
Length = 731
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 198/388 (51%), Gaps = 61/388 (15%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
E +L +LK FGF FK LQ++ ++ I+ ++ FV MPTG G + + +
Sbjct: 5 EIDLHKELKKYFGFSQFKG-LQEQVVKSII-TGNNTFVIMPTGG----GKSLCYQLPALV 58
Query: 93 PPGADFILNGNVRSRNGWISPI--LSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSG 145
G +++ + + I LSS Y L +KT I + D I SG
Sbjct: 59 LDGTAIVVSPLIALMKNQVDAIRSLSSEYGIAHVLNSSLNKTEIANVKKD------ITSG 112
Query: 146 QTKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVS 205
TK LLYV PE E + L + ++++ +DEAHC+S
Sbjct: 113 ITK------------------LLYVAPESLTKEEYIEFLNSV----PISFVAIDEAHCIS 150
Query: 206 EWGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
EWGHDFRP YR L + + G+ +P+I LTATA P V++DI+ L FK S R
Sbjct: 151 EWGHDFRPEYRNLRNIVRLLGD-VPMIGLTATATPKVQEDILKNLDMPDA-NTFKASFNR 208
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NL+Y+V K+ + + FI++ GK G+IYC +R+ ++A L+
Sbjct: 209 PNLYYEVRTK--TKNIESDIIRFIKQHKGK------SGVIYCLSRKKVEEIAQVLQVNGI 260
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
++ R++ Q+ F+ ++ V+ ATI+FGMGID+ +VRFV+H +P S+ +YY
Sbjct: 261 SAVPYHAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYY 320
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLE 403
QE+GRAGRDG + +C Y+S + LE
Sbjct: 321 QETGRAGRDGGEGHCLAYYSYKDIEKLE 348
>gi|238760167|ref|ZP_04621314.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
gi|238701603|gb|EEP94173.1| ATP-dependent DNA helicase recQ [Yersinia aldovae ATCC 35236]
Length = 605
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 213/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 12 LRDTFGYQQFRPGQQE--IINATLSGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 66 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 107
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 108 --SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWGHDFRPEYRALG 161
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 162 QLKQRFPD-LPVIALTATADEATRGDILRLLNLSQP--LVQVSSFDRPNIRYTLVEKFKP 218
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 219 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 264
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R++VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 265 LDNERRAQVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 324
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 325 DGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 383
>gi|419313842|ref|ZP_13855697.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11E]
gi|378154783|gb|EHX15854.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11E]
Length = 454
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|307132960|ref|YP_003884976.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
gi|306530489|gb|ADN00420.1| ATP-dependent DNA helicase [Dickeya dadantii 3937]
Length = 614
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 195/366 (53%), Gaps = 53/366 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++AI + + D V MPTG + + A +
Sbjct: 22 LRETFGYQQFRPG--QQAIINAAVSGRDCLVIMPTGGGKSLCYQIPA-----------LV 68
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
L G +SP++S K + ++ + S QT+ + +A+ R
Sbjct: 69 LEGLTLV----VSPLISLM-------KDQVDQLQAYGVAAACLNSTQTREQQQAVFSACR 117
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ +KLLY+ PER T+ F L+ L +N I +DEAHC+S+WGHDFRP YR LG
Sbjct: 118 --RGELKLLYIAPERLTTDGF---LEQLTHWNT-TLIAIDEAHCISQWGHDFRPEYRALG 171
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+++Q ++PI+ALTATA+ + +QDI +L P + S+F R N+ Y ++
Sbjct: 172 QIKQQL-PALPIVALTATADETTRQDIARLLDLRDP--LINISSFDRPNIRYTLV----- 223
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ + + + G+ K+ GI+YC +R DL L+ + ++
Sbjct: 224 -EKFKPLDQLWLFVQGQRGKS---GIVYCNSRAKVEDLCARLQNRGLSVGAYHAGLDNDR 279
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS+VQE+F+R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 280 RSQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA 339
Query: 389 YCRIYH 394
+++
Sbjct: 340 EAALFY 345
>gi|386312124|ref|YP_006008289.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
gi|319424749|gb|ADV52823.1| ATP-dependent DNA helicase RecQ [Shewanella putrefaciens 200]
Length = 607
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 213/405 (52%), Gaps = 54/405 (13%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRI 92
+ L+ +L +FG+ F+ + Q++ I + D V MPTG + + A
Sbjct: 10 DDPLSQRLAQVFGYRDFR-DGQREVIERVC-GGQDCLVIMPTGGGKSLCYQLPA------ 61
Query: 93 PPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKTEN 151
++NG I+ ++S +D S++ TG + Y + S + ++
Sbjct: 62 -----LMMNG--------ITIVVSPLISLMKDQVDSLLQTGVAAAY----LNSSLPREQS 104
Query: 152 KAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDF 211
+L +LR +KLLYV+PER +T F +Q L +LA +DEAHC+S+WGHDF
Sbjct: 105 AEVLRQLR--HGELKLLYVSPERLLTADFIERMQSL----QLAMFAIDEAHCISQWGHDF 158
Query: 212 RPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYD 271
RP Y LG+L+Q +P++ALTATA+ + +Q I L + PY++ +S R N+ Y
Sbjct: 159 RPEYAALGQLKQLF-PYVPMMALTATADQATRQSICERLGID-PYRLL-SSFDRPNIRYT 215
Query: 272 VIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD----------ALR 321
V ++ ++ F+ + + + GIIYC +R ++AD A
Sbjct: 216 VAEK---LNAANQLRHFLLQ------QNGSSGIIYCSSRRRVDEVADRLCLQGFNAKAYH 266
Query: 322 RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRA 381
+ + +R VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+GRA
Sbjct: 267 AGMTQEDRGAVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRA 326
Query: 382 GRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
GRDGL + + + ++I+ ++Q+E N ++
Sbjct: 327 GRDGLDAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
>gi|422316006|ref|ZP_16397414.1| ATP-dependent DNA helicase RecQ [Fusobacterium periodonticum D10]
gi|404591658|gb|EKA93735.1| ATP-dependent DNA helicase RecQ [Fusobacterium periodonticum D10]
Length = 606
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 220/412 (53%), Gaps = 56/412 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+D+F+ E Q+K I IL + ++ M TGA + V A +
Sbjct: 9 LKEYYGYDNFR-EGQEKIIDAIL-QKRNVLGIMTTGAGKSICYQVPA-----------LV 55
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
NG ISP++S +D S+ D L S T E IL +
Sbjct: 56 FNG----LTIVISPLIS----LMKDQVDSLKLIGIDASYLN---STLTSDEYNKIL--FK 102
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ K + KLLY++PER ++F ++ + K+A +VVDEAHCVS+WG +FR +Y R+
Sbjct: 103 IKKGQTKLLYISPERLENKAFLNFIKTI----KIAMVVVDEAHCVSQWGENFRKSYLRIA 158
Query: 220 ELRQFTGNSIPI--IALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD-- 275
+ ++ + + I +A TATA P +K DII LK P+ VF + R N+++ VI +
Sbjct: 159 DFIRYITDGVKIQTLAFTATATPKIKVDIIDKLKIEDPF-VFVDNFNRDNIYFKVIDNTG 217
Query: 276 ---DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL---RRKVNKH-- 327
DL DS + +++ K GK GIIYC TR++ D+ L R V K+
Sbjct: 218 LDKDLDIDSKPFIIDYLRKHKGK------SGIIYCSTRKNVDDIYSYLVSFDRSVTKYHG 271
Query: 328 -----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
ER + Q+ F+ ++ ++ AT +FGMGI++ N+R+V+H +P+ + +YYQE+GRAG
Sbjct: 272 GMSKEEREKNQKLFLDDDVEIMVATNAFGMGINKSNIRYVIHANIPADLESYYQEAGRAG 331
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQ--LELKFKNYLSMLEYCE 432
RDG +S + ++E + ++++ ++ ++++ L K KN+ M+EY E
Sbjct: 332 RDGGKSEAILIYNEKDRDIQRFLMEKESEGRKDKDYLNKKLKNFSKMIEYAE 383
>gi|113461847|ref|YP_719916.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
gi|112823890|gb|ABI25979.1| ATP-dependent DNA helicase RecQ [Haemophilus somnus 129PT]
Length = 624
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 160/268 (59%), Gaps = 29/268 (10%)
Query: 164 RIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLGELRQ 223
++KLLY++PE+A+T SF + + H K+++I VDE HC+S+WGHDFRP Y +LG L+
Sbjct: 127 KLKLLYISPEKALTTSFFHFISHC----KVSFIAVDETHCISQWGHDFRPEYTQLGGLKA 182
Query: 224 FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI--FDDLLKDS 281
++ PI+ALTATA+ + +QDI+ LK + P+ ++ S R N+ Y ++ F +
Sbjct: 183 SFPDA-PIMALTATADQATRQDILIHLKLSNPH-IYIGSFDRPNIRYSLVEKFKPM---- 236
Query: 282 YAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHERSR 331
+ +FI K GK GIIYC +R +A++LR+K ++ +R
Sbjct: 237 -EQLSQFIAKQKGKS------GIIYCNSRNKVERIAESLRQKGISAEAYHAGMSNEQREF 289
Query: 332 VQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSYCR 391
VQ +F + ++ ATI+FGMGI++ NVRFV H+ +P SI AYYQE+GRAGRD L +
Sbjct: 290 VQRAFQHDNVQIVVATIAFGMGINKSNVRFVAHFDLPRSIEAYYQETGRAGRDDLPAEAV 349
Query: 392 IYHSEHSKKSLEYVIKTDTSTKREQLEL 419
+++ L+ V+ + Q+EL
Sbjct: 350 LFYEPADYAWLQKVLLEKPDIPQRQIEL 377
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 212/421 (50%), Gaps = 63/421 (14%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ LK F F+ + Q +AI L D+F+ MPTG + + A
Sbjct: 505 KEVLGCLKHKFHLKGFR-KNQLEAINGTL-SGKDVFILMPTGGGKSLCYQLPA------- 555
Query: 94 PGADFILNGNVRSRNGWISPILSSF-----YLRFRDDKTSIVTGRSDLYQLELIVSG-QT 147
I G R ISP+LS +LR K +I + L +SG Q
Sbjct: 556 ----VIEGGASRGVTLVISPLLSLMQDQLDHLR----KLNIPS---------LPLSGEQP 598
Query: 148 KTENKAILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
E + ++ L +KLLYVTPE A + +L+ L LA IV+DEAHCVS
Sbjct: 599 ADERRQVISFLMAKNVLVKLLYVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSH 658
Query: 207 WGHDFRPTYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFR 265
WGHDFRP Y++LG LR ++ G IP +ALTATA VK+DII+ L+ ++ K+S R
Sbjct: 659 WGHDFRPDYKQLGLLRDRYQG--IPFMALTATANEIVKKDIINTLRMENCLEL-KSSFNR 715
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
NLFY++ KD Y + FI + + GIIYC +R +A LR
Sbjct: 716 PNLFYEI---KPKKDLYTELYRFIS-----NGHLHESGIIYCLSRTSCEQVAAKLRNDYG 767
Query: 324 ---------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAY 374
+ K ER R+Q + G +I ATI+FGMG+D+ +VRFV+H P S+ Y
Sbjct: 768 LKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGY 827
Query: 375 YQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKT---DTSTKREQLELKFKNYLSMLEYC 431
YQE+GRAGRDG ++C +++S + + +I + D TK Q ++ ++++C
Sbjct: 828 YQETGRAGRDGKPAHCIMFYSYKDHVTFQKLIMSGDGDAETKERQRQM----LRQVIQFC 883
Query: 432 E 432
E
Sbjct: 884 E 884
>gi|88803234|ref|ZP_01118760.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
gi|88780800|gb|EAR11979.1| putative ATP-dependent DNA helicase [Polaribacter irgensii 23-P]
Length = 727
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 207/392 (52%), Gaps = 49/392 (12%)
Query: 35 ELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPP 94
+L + LK FGF+ FK LQ++ I+ I+ R ++ FV MPTG G + + +
Sbjct: 2 DLHSPLKKFFGFNEFKG-LQEQVIKSIVNR-NNTFVIMPTGG----GKSLCYQLPALMQE 55
Query: 95 GADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIV-SGQTKTENKA 153
G + +SP+++ ++ + G S+ + ++ S KTE
Sbjct: 56 GTAIV-----------VSPLIA-----LMKNQVDAIRGISEHNGVAHVLNSSLNKTEIAQ 99
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ E+ + KLLYV PE + E + L R K++++ +DEAHC+SEWGHDFRP
Sbjct: 100 VKED--IASGITKLLYVAPESLIKEEYVAFL----RTQKISFVAIDEAHCISEWGHDFRP 153
Query: 214 TYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVI 273
YR L + + + +P+I LTATA V++DI+ L + FK S R+NLFY++
Sbjct: 154 EYRNLKHIIKAI-DDVPVICLTATATEKVQEDILKTLGITDANR-FKASFNRANLFYEI- 210
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
K+ + F+++ +GK GIIYC +R+ ++A L+
Sbjct: 211 -RPKTKEVEKDIIRFVKQRVGK------SGIIYCLSRKKVEEVAQILQVNGLNAVPYHAG 263
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R R Q+ F+ + +++ ATI+FGMGID+ +VRFV+H +P S+ +YYQE+GRAGR
Sbjct: 264 LDAKTRVRHQDMFLMEDCDIVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGR 323
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
D + YC +++ + LE + + ++E
Sbjct: 324 DDGEGYCLAFYAYKDIEKLEKFMSSKPVAEQE 355
>gi|152972806|ref|YP_001337952.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|329997483|ref|ZP_08302785.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|449059651|ref|ZP_21737339.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
gi|150957655|gb|ABR79685.1| ATP-dependent DNA helicase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|328539051|gb|EGF65090.1| ATP-dependent DNA helicase RecQ [Klebsiella sp. MS 92-3]
gi|448874669|gb|EMB09708.1| ATP-dependent DNA helicase RecQ [Klebsiella pneumoniae hvKP1]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 215/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQETIIETALEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
++ G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVMGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +++LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQVRLLYIAPERLMLDNF---LEHLANWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRM-PQIPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDVRAEVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|410100569|ref|ZP_11295529.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409215604|gb|EKN08603.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 611
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 51/373 (13%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+EL LK FG+ SF+ LQ + I+ IL R D V MPTG G + +
Sbjct: 3 KELQLLLKKFFGYTSFR-PLQAEIIQRIL-RKEDSLVLMPTGG----GKSICFQLPAIYM 56
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
PG + ISP+++ +D +V L ++ + + K
Sbjct: 57 PGTAVV-----------ISPLIALM----KDQVGGLVANGIPAAALNSMMPEEERHRIKQ 101
Query: 154 ILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRP 213
+ ++ +IKLLY++PE V E H+LL + ++ I +DEAHC+S WGHDFRP
Sbjct: 102 LC-----IQGKIKLLYLSPEALVGE-LHWLLPRM----DISLIAIDEAHCISHWGHDFRP 151
Query: 214 TYRRLGELR-QFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
Y +L L+ QF +PI+ALTATA+ + DI++ LK P +VF +S R NL +
Sbjct: 152 EYTQLSVLKEQFP--KVPIVALTATADKVTRTDIVTQLKLRDP-EVFVSSFDRPNLSLTI 208
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR----RKVNKH- 327
K+ + + FI + GI+YC +R T +LA+ L + V H
Sbjct: 209 RRGLNKKEKTSAIVHFIHA------HRHQSGIVYCMSRNSTENLAEELSSYGIKAVAYHA 262
Query: 328 -----ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
+R + Q+ F+ +NV+ AT++FGMGID+ NVR+VVH+ MP SI YYQE GRAG
Sbjct: 263 GLPPVQREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVVHYNMPGSIENYYQEIGRAG 322
Query: 383 RDGLQSYCRIYHS 395
RDG++S +++S
Sbjct: 323 RDGMKSDTLLFYS 335
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 213/418 (50%), Gaps = 45/418 (10%)
Query: 33 EQELTAKLKALFGFDSFKCELQKKAIRHILLRTH-DIFVSMPTGAVSLVGSVVSARSRVR 91
+QE+ +A+FG + F+ E Q++ I ++H D+ +PTG G ++ +
Sbjct: 252 DQEVDIANQAIFGNEIFR-ENQREIIN--ATKSHKDVLALIPTGG----GKSLTFQLSAV 304
Query: 92 IPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTEN 151
G + I P+LS +D S V + L Q++ E
Sbjct: 305 TDEGVTLV-----------IMPLLS-----LIEDNFSFVEDLG-IPACNLSSPNQSQKEE 347
Query: 152 KAILEELRLVKPRI-KLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ + + +K + KL+Y+TPE+ V + + HL K+ V+DE HCVS WG
Sbjct: 348 RRVYQCYNDIKNVVYKLVYLTPEKLVKSPGLMSAMDHLYAIGKIDRFVIDEVHCVSHWGQ 407
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFR Y L L+Q +P++ LTATA VK DI+ L K K+F++S R+NL
Sbjct: 408 DFRKDYLHLDMLKQRYP-KVPLLCLTATATLKVKDDILKRLGI-KDAKLFQSSFNRTNLL 465
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR------- 322
Y++ K + +V E I L K CGIIYC +R+ L++ L+R
Sbjct: 466 YEI----RDKKQFKNVTEDIVNMLRTRFKGK-CGIIYCISRKECQKLSEILKRNYHIKCD 520
Query: 323 ----KVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQES 378
+V+ ++R +QE +M+ EI +I ATI+FGMGI++++VRFV+H+ MP S+ Y QE
Sbjct: 521 YYHAEVSYNQRKDIQERWMKNEIQIIIATIAFGMGINKKDVRFVIHYSMPKSLEGYVQEC 580
Query: 379 GRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYF 436
GRAGRD +S C +Y+ +K ++ I T+ R + S+LEYCE+ Y+
Sbjct: 581 GRAGRDQNKSECILYYQYGDRKRNDFFILTNNDNTRTRKNENVHALYSILEYCEEPYY 638
>gi|296105298|ref|YP_003615444.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295059757|gb|ADF64495.1| ATP-dependent DNA helicase RecQ [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 630
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 25 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 82
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 83 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 120
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +++LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 121 TREQQQEVMAGCR--TGQVRLLYIAPERLMLDNF---LDHLAHWNPV-LLAVDEAHCISQ 174
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N P + + S+F R
Sbjct: 175 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDP--LIQVSSFDR 231
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 232 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 277
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 278 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 337
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 338 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 397
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 398 AQTCRRLVLLNY 409
>gi|336248080|ref|YP_004591790.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|444353809|ref|YP_007389953.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
gi|334734136|gb|AEG96511.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes KCTC 2190]
gi|443904639|emb|CCG32413.1| ATP-dependent DNA helicase RecQ [Enterobacter aerogenes EA1509E]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 217/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ +++I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRP--GQESIIATALEGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N LA + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLSHWN-LAMLAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ + IP +ALTATA+ + ++DI+ +L N P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRMPH-IPFMALTATADDTTRRDIVRLLGLNDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENDIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|145630467|ref|ZP_01786247.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
gi|144983857|gb|EDJ91299.1| ATP-dependent DNA helicase [Haemophilus influenzae R3021]
Length = 619
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 206/389 (52%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK++FG+ SF+ + Q++ I + L D V M TG + +S P F
Sbjct: 20 LKSVFGYQSFR-KGQEEVI-NAALNGQDALVVMATG---------NGKSLCYQIPALCF- 67
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ + + + S QT + + + +
Sbjct: 68 -----DGLTLVISPLISLM-------KDQVDQLQANGIEADFLNSSQTLAQQQQVQN--K 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
L+ ++KLLYV+PE+ +T SF L+ Y+K+ +I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 114 LISGQLKLLYVSPEKVMTNSFF----QLISYSKVCFIAIDEAHCISQWGHDFRPEYTQLG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L+ ++ PI+ALTATA+ + +QDI+ L +K + S R N+ Y L+
Sbjct: 170 GLKASFPDA-PIMALTATADYATQQDILRHLNLKNLHK-YIGSFDRPNIRYT------LE 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y +++ L + K+ GIIYC +R +A++LR K + R
Sbjct: 222 EKYKPMEQLTRFVLAQKGKS---GIIYCNSRNKVERIAESLRNKGVSAAAYHAGMETAIR 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
RVQ+ F R + V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 279 ERVQQDFQRDNVQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L+ ++ T + Q+E
Sbjct: 339 AVLFYEPADYAWLQKILLEKPETPQRQIE 367
>gi|158320015|ref|YP_001512522.1| ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs]
gi|158140214|gb|ABW18526.1| ATP-dependent DNA helicase RecQ [Alkaliphilus oremlandii OhILAs]
Length = 745
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 207/403 (51%), Gaps = 53/403 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK +G+D+F+ + Q + I HIL D+ MPTG + + A I
Sbjct: 8 LKKYYGYDNFR-DGQDEIIDHIL-SGRDVLTIMPTGGGKSLCYQIPA-----------MI 54
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
++G +SP++S K + T + I S +E++ I EE +
Sbjct: 55 MDGTAI----VVSPLISLM-------KDQVDTLQQMGIPAAFINSSLAFSESQRIFEEAK 103
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ KLLYV PER +E F L+R K++ + VDEAHCVS WGHDFRP+Y R+
Sbjct: 104 --RGEYKLLYVAPERLESEGF----TELIRSIKISMVAVDEAHCVSRWGHDFRPSYLRIK 157
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
LR + + + A TATA VK+DII ++ PY++ T+ F R NL ++V+ +
Sbjct: 158 NLRSLSEDHPVLAAFTATATSEVKEDIIDLIGLEGPYEI--TTGFDRENLKFEVV---RV 212
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR----KVNKH------E 328
K+ +++ +++ + GK GIIYC TR+ T + L R + H +
Sbjct: 213 KEKLSYILKYVSEHKGK------AGIIYCLTRKLTEQVCSELVRAGFNAIQYHAGLGDVQ 266
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
RS+ Q+ F+ ++ AT +FGMGID+ ++R+V+H+ MP +I AYYQE+GRAGRDG S
Sbjct: 267 RSKNQDDFLFDNAEIMVATNAFGMGIDKLDIRYVIHYNMPQNIEAYYQEAGRAGRDGEPS 326
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYC 431
C + S ++I T+ + + ++ M+ YC
Sbjct: 327 ECILLFSPQDIVMNNFLIDNGTTDGIGRTK-EYDKLQDMISYC 368
>gi|410086312|ref|ZP_11283024.1| ATP-dependent DNA helicase RecQ [Morganella morganii SC01]
gi|409767157|gb|EKN51237.1| ATP-dependent DNA helicase RecQ [Morganella morganii SC01]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/416 (30%), Positives = 209/416 (50%), Gaps = 53/416 (12%)
Query: 38 AKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGAD 97
A L +FG+ F+ + I + D V MPTG G + + + PG
Sbjct: 15 AILHQIFGYQQFRAG--QSDIIDTVTGGRDCLVVMPTGG----GKSLCYQIPALMLPGLT 68
Query: 98 FILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEE 157
+ +SP++S ++ + D+ ++ + + S QT E + +LE
Sbjct: 69 VV-----------VSPLIS--LMKDQVDQLRLLG-----VEAGYLNSAQTAQEQQKVLEG 110
Query: 158 LRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
RIKLLYV PER + SF LQ + + + VDEAHC+S+WGHDFRP Y
Sbjct: 111 CH--NNRIKLLYVAPERLLMSSFIRQLQQW----QPSLLAVDEAHCISQWGHDFRPEYCA 164
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDD 276
+GELRQ +P+IALTATA+ + + DI S L+ + P + S+F R N+ Y ++
Sbjct: 165 IGELRQHL-PGVPVIALTATADNTTRSDICSRLRLSDP--LIHISSFDRPNIRYTLV--- 218
Query: 277 LLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNK 326
+ Y K F + + + CGIIYC +R D+A L+++ ++
Sbjct: 219 ---EKY---KAFDQLWMFVRGQKGQCGIIYCNSRNKVEDVAARLQKRGLSVAAYHAGLDN 272
Query: 327 HERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGL 386
+R VQ++F++ + V+ AT++FGMGI++ NVRFV H+ +P +I +YYQE+GRAGRDG+
Sbjct: 273 SQREWVQDAFLKDNLQVVVATVAFGMGINKSNVRFVAHFDIPRNIESYYQETGRAGRDGV 332
Query: 387 QSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L + + ++ +E N + + LV+L +
Sbjct: 333 SAEAVLFYDPADMAWLRRCLDEKPAGPQKDIEQHKLNAMGAFAQAQTCRRLVLLNY 388
>gi|422337702|ref|ZP_16418672.1| ATP-dependent DNA helicase recQ [Aggregatibacter aphrophilus F0387]
gi|353345034|gb|EHB89332.1| ATP-dependent DNA helicase recQ [Aggregatibacter aphrophilus F0387]
Length = 631
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 200/390 (51%), Gaps = 53/390 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L ++FG+ SF+ Q+ I H L D V M TG + +S P F
Sbjct: 36 LHSVFGYQSFRKGQQE--IIHAALSGQDCLVIMATG---------TGKSLCYQIPALCF- 83
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + + + S QT E + + + R
Sbjct: 84 -----DGMTLVVSPLISLM-------KDQVDQLRTNGIEADYLNSTQTFEEQQQV--QNR 129
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T SF + H +++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 130 AISGQLKLLYLSPEKVMTNSFFQFISHC----NVSFIAIDEAHCISQWGHDFRPEYTQLG 185
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
L+ +PI+ALTATA+ + +QDI+ L+ N+P+ F +F R N+ Y ++
Sbjct: 186 GLKG-CFPKVPIMALTATADQTTQQDILQNLRLNRPH--FHVGSFDRPNIRYTLV----- 237
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ + +++ L + K+ GI+YC +R +A+ L K +
Sbjct: 238 -EKFKPMEQLCRFVLAQKGKS---GIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENTL 293
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R +VQ F R I V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 294 REKVQRDFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPA 353
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L ++ T + Q+E
Sbjct: 354 EAVLFYDPADYVWLNKILMEKPETPQRQIE 383
>gi|410632491|ref|ZP_11343149.1| ATP-dependent DNA helicase RecQ [Glaciecola arctica BSs20135]
gi|410147917|dbj|GAC20016.1| ATP-dependent DNA helicase RecQ [Glaciecola arctica BSs20135]
Length = 594
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 202/393 (51%), Gaps = 56/393 (14%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+D F+ + Q + I +L + D+ V MPTG G + + + PG +
Sbjct: 8 LKQTFGYDHFR-DGQAQVISQVL-QQKDVLVLMPTGG----GKSLCYQIPAMLLPGLTIV 61
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVT-GRSDLYQLELIVSGQTKTENKAILEEL 158
+SP++S +D +++T G + Y I S + E + + +
Sbjct: 62 -----------VSPLIS----LMKDQVDALLTYGVNAAY----INSNLSPQEMFNVYKSM 102
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+ + KL+YV PER + F + LQ L ++ I VDEAHCVS WGHDFR YR L
Sbjct: 103 Q--DGKYKLIYVAPERLMQLEFIHRLQGLT----VSLIAVDEAHCVSHWGHDFRKDYRLL 156
Query: 219 GELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLL 278
G+L+ T +IPI+ LTATA+ + + DI L +P+ +FK S R N+ Y+ +
Sbjct: 157 GQLKA-TFPNIPIMGLTATADLATRADITQQLNLQQPF-IFKGSFDRPNIRYNQVTKYKA 214
Query: 279 KD-SYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
D + A VK+ GIIYC +R DL+ AL + +
Sbjct: 215 TDQAIAFVKQ-----------QEGSGIIYCNSRRKVDDLSIALAKHGVNCAGYHAGLEGE 263
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R ++Q F++ +I++I AT++FGMGID+ NVRFVVH+ +P SI +YYQE GRAGRDG+
Sbjct: 264 IRDKIQRDFIQDKIDIIVATVAFGMGIDKSNVRFVVHFDLPRSIESYYQEIGRAGRDGMP 323
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELK 420
+ + E + I T + +R +EL+
Sbjct: 324 AEALLLFDEKDAARIRQWISTGENPQRNNVELQ 356
>gi|154494364|ref|ZP_02033684.1| hypothetical protein PARMER_03719 [Parabacteroides merdae ATCC
43184]
gi|154085808|gb|EDN84853.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 729
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI +L +D FV MPTG G + + + G
Sbjct: 10 LTEELKKHFGFDTFKG--NQRAIIENVLAGNDTFVLMPTGG----GKSLCYQLPSLMMQG 63
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + + + NK+ +
Sbjct: 64 TAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKSAI 104
Query: 156 EELR--LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++ + R KLLYV PE E+ +L R +++ VDEAHC+SEWGHDFR
Sbjct: 105 DQVKDDIRNGRTKLLYVAPESLTKDENVEFL-----RQVNISFYAVDEAHCISEWGHDFR 159
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G P+IALTATA P V+ DI L VFK+S RSNL+Y++
Sbjct: 160 PEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRSNLYYEI 217
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ A++ I K + K N+ + GIIYC +R+ + AD L+
Sbjct: 218 ------RPKTANIDREIIKYI-KSNEGKS-GIIYCLSRKKVEEFADILKANGIKALPYHA 269
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 270 GMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 329
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C +++ + LE ++ ++E
Sbjct: 330 RDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 362
>gi|432682606|ref|ZP_19917956.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
gi|431216878|gb|ELF14470.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE143]
Length = 611
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKAEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|290477101|ref|YP_003470014.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
gi|289176447|emb|CBJ83256.1| ATP-dependent DNA helicase [Xenorhabdus bovienii SS-2004]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/413 (30%), Positives = 214/413 (51%), Gaps = 51/413 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ + +L D V MPTG G + + I G +
Sbjct: 17 LRKTFGYQQFRPGQQQ--VIDAVLDGRDCLVVMPTGG----GKSLCYQIPALINNGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + E + S Q + + I++ R
Sbjct: 71 -----------VSPLISLM-------KDQVDQLRANGVEAECLNSTQNREQQVDIIQRCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ IKLLY+ PER VT++F L L ++ + + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --QGSIKLLYIAPERLVTDNF---LDQLHDWHPV-LLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+ R+ +P IALTATA+ + +QDI +L+ + P + +S R N+ Y ++
Sbjct: 167 QFRR-RFPELPFIALTATADKTTRQDITRLLELHDPL-IHLSSFDRPNIRYTLV------ 218
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHER 329
+ Y + + G+ K+ GIIYC +R + A+ L+++ ++ ++R
Sbjct: 219 EKYKPLDQLWSFVRGQQGKS---GIIYCNSRTKVEETAERLQKRGLSVAPYHAGLDNNQR 275
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQ++F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 276 AWVQDAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 335
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
++ L ++ + +++ +E N + + LV+L +
Sbjct: 336 AILFFDPADMAWLRRCLEEKPAGEQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|260846402|ref|YP_003224180.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
12009]
gi|419302912|ref|ZP_13844902.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11C]
gi|419869038|ref|ZP_14391264.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
CVM9450]
gi|257761549|dbj|BAI33046.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
12009]
gi|378146097|gb|EHX07251.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11C]
gi|388343371|gb|EIL09335.1| ATP-dependent DNA helicase RecQ [Escherichia coli O103:H2 str.
CVM9450]
Length = 609
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|218707455|ref|YP_002414974.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMN026]
gi|417588964|ref|ZP_12239725.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
gi|218434552|emb|CAR15481.1| ATP-dependent DNA helicase [Escherichia coli UMN026]
gi|345331100|gb|EGW63561.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_C165-02]
Length = 609
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|37927351|pdb|1OYY|A Chain A, Structure Of The Recq Catalytic Core Bound To Atp-Gamma-S
Length = 523
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|417173851|ref|ZP_12003647.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2608]
gi|417185330|ref|ZP_12010731.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0624]
gi|386176543|gb|EIH54022.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2608]
gi|386182630|gb|EIH65386.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0624]
Length = 611
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|293407448|ref|ZP_06651368.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298383188|ref|ZP_06992782.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300900624|ref|ZP_07118784.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|419937477|ref|ZP_14454373.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|422335405|ref|ZP_16416404.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|432355858|ref|ZP_19599118.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|432404223|ref|ZP_19646965.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|432428490|ref|ZP_19670969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|432463191|ref|ZP_19705321.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|432478186|ref|ZP_19720170.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|432491658|ref|ZP_19733516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|432520039|ref|ZP_19757217.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|432540207|ref|ZP_19777097.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|432633771|ref|ZP_19869687.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|432643423|ref|ZP_19879243.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|432668418|ref|ZP_19903986.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|432772598|ref|ZP_20006908.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|432841683|ref|ZP_20075137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|432889621|ref|ZP_20102893.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|432915492|ref|ZP_20120747.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|433021080|ref|ZP_20209155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|433055454|ref|ZP_20242605.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|433070190|ref|ZP_20256950.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|433160980|ref|ZP_20345793.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|433180699|ref|ZP_20365069.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|433205578|ref|ZP_20389319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
gi|291425559|gb|EFE98597.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1412]
gi|298276424|gb|EFI17943.1| ATP-dependent DNA helicase RecQ [Escherichia coli FVEC1302]
gi|300355875|gb|EFJ71745.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 198-1]
gi|373243555|gb|EHP63057.1| ATP-dependent DNA helicase recQ [Escherichia coli 4_1_47FAA]
gi|388397659|gb|EIL58631.1| ATP-dependent DNA helicase RecQ [Escherichia coli 576-1]
gi|430872071|gb|ELB95690.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE2]
gi|430922543|gb|ELC43295.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE26]
gi|430950316|gb|ELC69702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE181]
gi|430985141|gb|ELD01748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE204]
gi|431001695|gb|ELD17271.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE208]
gi|431017014|gb|ELD30531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE213]
gi|431047458|gb|ELD57458.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE228]
gi|431066698|gb|ELD75322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE235]
gi|431166942|gb|ELE67245.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE80]
gi|431177006|gb|ELE76946.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE83]
gi|431197038|gb|ELE95905.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE116]
gi|431323251|gb|ELG10799.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE54]
gi|431384955|gb|ELG68945.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE140]
gi|431413215|gb|ELG96009.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE158]
gi|431435094|gb|ELH16707.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE190]
gi|431526412|gb|ELI03166.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE105]
gi|431565194|gb|ELI38332.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE122]
gi|431578296|gb|ELI50904.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE128]
gi|431673078|gb|ELJ39309.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE177]
gi|431697564|gb|ELJ62670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE82]
gi|431715540|gb|ELJ79688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE95]
Length = 611
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|423111286|ref|ZP_17098981.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
gi|423117298|ref|ZP_17104989.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376376415|gb|EHS89194.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5245]
gi|376377058|gb|EHS89832.1| ATP-dependent DNA helicase recQ [Klebsiella oxytoca 10-5243]
Length = 608
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/427 (29%), Positives = 216/427 (50%), Gaps = 55/427 (12%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L+ FG+ F+ ++ I L D V MPTG + V A
Sbjct: 4 AEVLNQESLAKQVLQETFGYQQFRPG--QETIIDTALAGRDCLVVMPTGGGKSLCYQVPA 61
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+L G ++ ++S +D ++ ++ + S Q
Sbjct: 62 -----------LVLGG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 99
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
++ + + ++ R +I+LLY+ PER + ++F L+HL +N L+ + VDEAHC+S+
Sbjct: 100 SREQQQEVMAGCR--SGQIRLLYIAPERLMLDNF---LEHLTHWN-LSMVAVDEAHCISQ 153
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ IP +ALTATA+ + ++DI+ +L + P + + S+F R
Sbjct: 154 WGHDFRPEYAALGQLRQRI-PQIPFMALTATADDTTRRDIVRLLGLSDP--LIQVSSFDR 210
Query: 266 SNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK-- 323
N+ Y +L + + + + + + K+ GIIYC +R D A L+ +
Sbjct: 211 PNIRY------MLMEKFKPLDQLMRYVQDQRGKS---GIIYCNSRSKVEDTAARLQSRGI 261
Query: 324 --------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYY 375
+ H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YY
Sbjct: 262 SAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYY 321
Query: 376 QESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGY 435
QE+GRAGRDGL + +++ L ++ + + +E N + +
Sbjct: 322 QETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPLQDIERHKLNAMGAFAEAQTCR 381
Query: 436 FLVILVF 442
LV+L +
Sbjct: 382 RLVLLNY 388
>gi|238786204|ref|ZP_04630153.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
gi|238712894|gb|EEQ04957.1| ATP-dependent DNA helicase recQ [Yersinia bercovieri ATCC 43970]
Length = 610
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 212/419 (50%), Gaps = 63/419 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I + L D V MPTG G + + + G +
Sbjct: 17 LRDTFGYQQFRPGQQE--IINATLEGQDCLVVMPTGG----GKSLCYQIPALVTDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S + D + G L S QT+ + A+++ R
Sbjct: 71 -----------VSPLISLMKDQV-DQLLAYGVGAGCLN------SSQTREQQLAVMDGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER V ESF L L ++ + A + VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --SGQIKLLYIAPERLVMESF---LDQLHQW-RPALLAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVI----- 273
+L+Q + +P+IALTATA+ + + DI+ +L ++P + + S+F R N+ Y ++
Sbjct: 167 QLKQRFPH-LPVIALTATADEATRGDIVRLLNLHQP--LIQVSSFDRPNIRYTLVEKFKP 223
Query: 274 FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK---------- 323
D L + F++ GK GIIYC +R D L+ +
Sbjct: 224 LDQLWR--------FVQDQRGKS------GIIYCNSRAKVEDTTARLQSRGLSVAAYHAG 269
Query: 324 VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGR 383
++ R+ VQE+F R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGR
Sbjct: 270 LDNERRAHVQEAFQRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRTIESYYQETGRAGR 329
Query: 384 DGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
DGL + + + L ++ + ++ +E N + + LV+L +
Sbjct: 330 DGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|381188984|ref|ZP_09896542.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379649120|gb|EIA07697.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 704
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 200/375 (53%), Gaps = 53/375 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
++ Q+L LK FGF+ F+ + ++ + + +L D MPTG G + +
Sbjct: 2 ITSQKLHETLKENFGFEKFR--INQEQVINAILSGQDTLAIMPTGG----GKSICFQLPA 55
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ PG + ISP+++ K + + +++ Q I S QT E
Sbjct: 56 LLFPGITIV-----------ISPLIALM-------KDQVDSLKANGIQACYINSSQTDAE 97
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
++ ++ L+ ++KL+YV PE S YL +++ L+ I +DEAHC+S WGHD
Sbjct: 98 QQSHIQ--NLINNKVKLVYVAPE-----SLSYL-ENVFSQITLSLIAIDEAHCISSWGHD 149
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP Y LG L++ S PI+ALTATA+ + ++DI L +P K F +S R NL
Sbjct: 150 FRPAYTNLGYLKK-RFPSTPILALTATADKATRKDISKQLNLKEP-KSFISSFDRKNLSL 207
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V + + VK+ ++ K ++ GI+YC +R+ T +LA+ L++
Sbjct: 208 EV------RPALDRVKQIVDFISAKPRES---GIVYCLSRKTTEELAEKLQKAGINAKAY 258
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ RS+ Q+ F+ + V+ ATI+FGMGID+ NVR+V+H+ +P +I YYQE GR
Sbjct: 259 HAGLDSTVRSKTQDDFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGR 318
Query: 381 AGRDGLQSYCRIYHS 395
AGRDGL S ++ S
Sbjct: 319 AGRDGLPSETILFES 333
>gi|383192105|ref|YP_005202233.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371590363|gb|AEX54093.1| ATP-dependent DNA helicase RecQ [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 610
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 217/429 (50%), Gaps = 64/429 (14%)
Query: 31 VSEQELTAK-LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSR 89
++++EL + L+ FG+ F+ Q I + + D V MPTG + + A
Sbjct: 7 INKEELAHQVLRDTFGYQQFRPGQQ--TIINTAISGRDCLVVMPTGGGKSLCYQIPA--- 61
Query: 90 VRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKT 149
+++G ++ ++S +D ++ + L S QT+
Sbjct: 62 --------LVMDG--------LTLVVSPLISLMKDQVDQLMAAGVEAGCLN---STQTRE 102
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
+ ++ R RIK+LY+ PER + F L+ L ++N A + VDEAHC+S+WGH
Sbjct: 103 QQLDVMAGCR--AGRIKMLYIAPERLMMGDF---LEQLQQWNP-AMLAVDEAHCISQWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNL 268
DFRP YR LG+L+ +P+IALTATA+ + + DI+ +L+ N P + + S+F R N+
Sbjct: 157 DFRPEYRALGQLK-LRYPQLPVIALTATADEATRNDIVRLLELNDP--LIQVSSFDRPNI 213
Query: 269 FYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK 323
Y ++ D L++ F++ GK GIIYC +R D A L+ +
Sbjct: 214 RYTLVEKFKPLDQLIR--------FVQDQRGKS------GIIYCNSRAKVEDTAARLQSR 259
Query: 324 ----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPA 373
++ R+RVQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +
Sbjct: 260 GLSVGAYHAGLDNDTRARVQEGFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRTIES 319
Query: 374 YYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQ 433
YYQE+GRAGRDGL + + + L ++ + ++ +E N ++ +
Sbjct: 320 YYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQQDVERHKLNAMNAFAEAQT 379
Query: 434 GYFLVILVF 442
LV+L +
Sbjct: 380 CRRLVLLNY 388
>gi|15804414|ref|NP_290454.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EDL933]
gi|15834006|ref|NP_312779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
Sakai]
gi|26250563|ref|NP_756603.1| ATP-dependent DNA helicase RecQ [Escherichia coli CFT073]
gi|91213348|ref|YP_543334.1| ATP-dependent DNA helicase RecQ [Escherichia coli UTI89]
gi|117626081|ref|YP_859404.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O1]
gi|168750361|ref|ZP_02775383.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|168753724|ref|ZP_02778731.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|168763952|ref|ZP_02788959.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|168768108|ref|ZP_02793115.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|168775622|ref|ZP_02800629.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|168780726|ref|ZP_02805733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|168786665|ref|ZP_02811672.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC869]
gi|168801109|ref|ZP_02826116.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC508]
gi|193065720|ref|ZP_03046785.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|193068067|ref|ZP_03049032.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194434028|ref|ZP_03066298.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|195938114|ref|ZP_03083496.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4024]
gi|208806062|ref|ZP_03248399.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208812810|ref|ZP_03254139.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208821321|ref|ZP_03261641.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209400089|ref|YP_002273341.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|217325284|ref|ZP_03441368.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|227888592|ref|ZP_04006397.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|237702832|ref|ZP_04533313.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|261225598|ref|ZP_05939879.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255644|ref|ZP_05948177.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
FRIK966]
gi|291285239|ref|YP_003502057.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
CB9615]
gi|300818704|ref|ZP_07098911.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300939956|ref|ZP_07154585.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300950413|ref|ZP_07164336.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300955172|ref|ZP_07167569.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300985659|ref|ZP_07177546.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|301029039|ref|ZP_07192192.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|301047295|ref|ZP_07194381.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|301328411|ref|ZP_07221497.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301646111|ref|ZP_07246011.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|306815139|ref|ZP_07449292.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|331644555|ref|ZP_08345675.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331655508|ref|ZP_08356501.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331665474|ref|ZP_08366373.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331675289|ref|ZP_08376040.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332282668|ref|ZP_08395081.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|386597646|ref|YP_006094046.1| RecQ familyATP-dependent DNA helicase [Escherichia coli DH1]
gi|386606401|ref|YP_006112701.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|386626719|ref|YP_006146447.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|386631763|ref|YP_006151483.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i2']
gi|386636683|ref|YP_006156402.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i14']
gi|387619114|ref|YP_006122136.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|387623474|ref|YP_006131102.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|387885050|ref|YP_006315352.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|415875441|ref|ZP_11542196.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|416261809|ref|ZP_11640557.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|416284789|ref|ZP_11647410.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|416307593|ref|ZP_11654634.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1044]
gi|416319727|ref|ZP_11662279.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|416326935|ref|ZP_11667010.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1125]
gi|416778771|ref|ZP_11876102.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
G5101]
gi|416790129|ref|ZP_11880995.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|416801903|ref|ZP_11885883.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|416812763|ref|ZP_11890805.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
3256-97]
gi|416823216|ref|ZP_11895422.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|416833537|ref|ZP_11900417.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|417087782|ref|ZP_11954640.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|417125722|ref|ZP_11973683.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|417135031|ref|ZP_11979816.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|417156682|ref|ZP_11994306.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|417169247|ref|ZP_12001502.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|417249485|ref|ZP_12041269.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|417265179|ref|ZP_12052558.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|417273258|ref|ZP_12060605.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|417279255|ref|ZP_12066565.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|417293640|ref|ZP_12080919.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|417296259|ref|ZP_12083506.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|417868124|ref|ZP_12513155.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|418040283|ref|ZP_12678529.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|418960294|ref|ZP_13512185.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|419804829|ref|ZP_14329980.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|419926606|ref|ZP_14444357.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|419943310|ref|ZP_14459870.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|421777493|ref|ZP_16214088.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|422361452|ref|ZP_16442074.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|422364103|ref|ZP_16444631.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|422752068|ref|ZP_16805973.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|422757541|ref|ZP_16811359.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|422764373|ref|ZP_16818123.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|422773902|ref|ZP_16827583.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|422818975|ref|ZP_16867187.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|422836240|ref|ZP_16884288.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|422842112|ref|ZP_16890078.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|422963299|ref|ZP_16973143.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|422990089|ref|ZP_16980861.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|422996987|ref|ZP_16987749.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|423002081|ref|ZP_16992833.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|423005737|ref|ZP_16996482.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|423012298|ref|ZP_17003030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|423021529|ref|ZP_17012234.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|423026687|ref|ZP_17017381.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|423032514|ref|ZP_17023200.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|423035353|ref|ZP_17026030.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423040509|ref|ZP_17031178.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423047194|ref|ZP_17037853.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423055733|ref|ZP_17044539.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423057736|ref|ZP_17046535.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|423703345|ref|ZP_17677777.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|427807018|ref|ZP_18974085.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|427811606|ref|ZP_18978671.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429721569|ref|ZP_19256483.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429773463|ref|ZP_19305477.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429778828|ref|ZP_19310793.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429782663|ref|ZP_19314587.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429788056|ref|ZP_19319942.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429794495|ref|ZP_19326335.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429800455|ref|ZP_19332243.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429804067|ref|ZP_19335823.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429808715|ref|ZP_19340430.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429814414|ref|ZP_19346084.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429819617|ref|ZP_19351246.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429905937|ref|ZP_19371912.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429910070|ref|ZP_19376031.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429915970|ref|ZP_19381915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429921018|ref|ZP_19386944.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429926826|ref|ZP_19392736.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429930757|ref|ZP_19396656.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429937299|ref|ZP_19403184.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429942978|ref|ZP_19408849.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429945657|ref|ZP_19411516.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429953220|ref|ZP_19419064.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429956566|ref|ZP_19422396.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432360276|ref|ZP_19603487.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|432365076|ref|ZP_19608229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|432367297|ref|ZP_19610409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|432383719|ref|ZP_19626643.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|432389627|ref|ZP_19632505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|432394491|ref|ZP_19637307.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|432414086|ref|ZP_19656738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|432419345|ref|ZP_19661934.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|432434048|ref|ZP_19676469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|432438779|ref|ZP_19681155.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|432443352|ref|ZP_19685684.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|432448496|ref|ZP_19690791.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|432452089|ref|ZP_19694343.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|432458964|ref|ZP_19701137.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|432483235|ref|ZP_19725182.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|432487578|ref|ZP_19729484.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|432493074|ref|ZP_19734902.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|432506714|ref|ZP_19748431.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|432516211|ref|ZP_19753425.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|432526295|ref|ZP_19763406.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|432528681|ref|ZP_19765751.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|432571096|ref|ZP_19807600.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|432576067|ref|ZP_19812534.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|432578095|ref|ZP_19814540.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|432590276|ref|ZP_19826626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|432595035|ref|ZP_19831345.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|432600079|ref|ZP_19836347.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|432605259|ref|ZP_19841468.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|432613825|ref|ZP_19849981.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|432629445|ref|ZP_19865409.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|432634727|ref|ZP_19870624.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|432648493|ref|ZP_19884277.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|432653476|ref|ZP_19889212.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|432658058|ref|ZP_19893754.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|432663070|ref|ZP_19898697.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|432672915|ref|ZP_19908432.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|432677001|ref|ZP_19912440.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|432687652|ref|ZP_19922939.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|432689149|ref|ZP_19924414.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|432701337|ref|ZP_19936480.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|432706554|ref|ZP_19941647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|432739319|ref|ZP_19974046.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|432747796|ref|ZP_19982457.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|432752279|ref|ZP_19986855.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|432756779|ref|ZP_19991322.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|432768201|ref|ZP_20002590.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|432780984|ref|ZP_20015199.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|432785808|ref|ZP_20019983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|432789848|ref|ZP_20023974.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|432795081|ref|ZP_20029152.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|432796592|ref|ZP_20030625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|432808068|ref|ZP_20041980.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|432818612|ref|ZP_20052333.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|432824744|ref|ZP_20058407.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|432847043|ref|ZP_20079554.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|432866699|ref|ZP_20089036.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|432878187|ref|ZP_20095636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|432907645|ref|ZP_20116028.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|432931567|ref|ZP_20131599.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|432940641|ref|ZP_20138542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|432943514|ref|ZP_20140349.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|432951080|ref|ZP_20144823.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|432964632|ref|ZP_20153702.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|432974095|ref|ZP_20162937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|432976046|ref|ZP_20164877.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|432987668|ref|ZP_20176378.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|432997605|ref|ZP_20186184.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|433002200|ref|ZP_20190717.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|433002724|ref|ZP_20191232.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|433010024|ref|ZP_20198434.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|433016140|ref|ZP_20204466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|433025731|ref|ZP_20213696.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|433035751|ref|ZP_20223437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|433040839|ref|ZP_20228423.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|433045355|ref|ZP_20232827.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|433050297|ref|ZP_20237614.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|433060346|ref|ZP_20247376.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|433065296|ref|ZP_20252196.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|433084749|ref|ZP_20271193.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|433089549|ref|ZP_20275906.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|433103420|ref|ZP_20289488.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|433117753|ref|ZP_20303531.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|433127456|ref|ZP_20312995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|433132402|ref|ZP_20317821.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|433137074|ref|ZP_20322396.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|433141529|ref|ZP_20326765.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|433146459|ref|ZP_20331588.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|433151482|ref|ZP_20336476.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|433156014|ref|ZP_20340937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|433165840|ref|ZP_20350564.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|433170836|ref|ZP_20355450.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|433175714|ref|ZP_20360216.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|433190628|ref|ZP_20374713.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|433195880|ref|ZP_20379845.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|433200586|ref|ZP_20384466.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|433209973|ref|ZP_20393634.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|433214852|ref|ZP_20398424.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|442591349|ref|ZP_21009834.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|442603448|ref|ZP_21018338.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
gi|452967363|ref|ZP_21965590.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4009]
gi|12518696|gb|AAG59018.1|AE005613_11 ATP-dependent DNA helicase [Escherichia coli O157:H7 str. EDL933]
gi|26110993|gb|AAN83177.1|AE016769_292 ATP-dependent DNA helicase recQ [Escherichia coli CFT073]
gi|13364228|dbj|BAB38175.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. Sakai]
gi|91074922|gb|ABE09803.1| ATP-dependent DNA helicase [Escherichia coli UTI89]
gi|115515205|gb|ABJ03280.1| ATP-dependent DNA helicase [Escherichia coli APEC O1]
gi|187768838|gb|EDU32682.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4196]
gi|188015421|gb|EDU53543.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4113]
gi|189001596|gb|EDU70582.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4076]
gi|189358975|gb|EDU77394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4401]
gi|189362723|gb|EDU81142.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4486]
gi|189365963|gb|EDU84379.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4501]
gi|189373237|gb|EDU91653.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC869]
gi|189376685|gb|EDU95101.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC508]
gi|192926687|gb|EDV81316.1| ATP-dependent DNA helicase RecQ [Escherichia coli E22]
gi|192958687|gb|EDV89125.1| ATP-dependent DNA helicase RecQ [Escherichia coli E110019]
gi|194417686|gb|EDX33785.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 1012]
gi|208725863|gb|EDZ75464.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4206]
gi|208734087|gb|EDZ82774.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4045]
gi|208741444|gb|EDZ89126.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4042]
gi|209161489|gb|ACI38922.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC4115]
gi|209753168|gb|ACI74891.1| threonine efflux protein [Escherichia coli]
gi|209753170|gb|ACI74892.1| threonine efflux protein [Escherichia coli]
gi|209753172|gb|ACI74893.1| threonine efflux protein [Escherichia coli]
gi|209753174|gb|ACI74894.1| threonine efflux protein [Escherichia coli]
gi|209753176|gb|ACI74895.1| threonine efflux protein [Escherichia coli]
gi|217321505|gb|EEC29929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14588]
gi|226903003|gb|EEH89262.1| ATP-dependent DNA helicase recQ [Escherichia sp. 3_2_53FAA]
gi|227834431|gb|EEJ44897.1| ATP-dependent DNA helicase RecQ [Escherichia coli 83972]
gi|260451335|gb|ACX41757.1| ATP-dependent DNA helicase, RecQ family [Escherichia coli DH1]
gi|290765112|gb|ADD59073.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
CB9615]
gi|299878002|gb|EFI86213.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 196-1]
gi|300300814|gb|EFJ57199.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 185-1]
gi|300317889|gb|EFJ67673.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 175-1]
gi|300408043|gb|EFJ91581.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 45-1]
gi|300450259|gb|EFK13879.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 116-1]
gi|300455218|gb|EFK18711.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 21-1]
gi|300528670|gb|EFK49732.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 107-1]
gi|300845161|gb|EFK72921.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 78-1]
gi|301075637|gb|EFK90443.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 146-1]
gi|305851508|gb|EFM51962.1| ATP-dependent DNA helicase RecQ [Escherichia coli NC101]
gi|307628885|gb|ADN73189.1| ATP-dependent DNA helicase RecQ [Escherichia coli UM146]
gi|312948375|gb|ADR29202.1| ATP-dependent DNA helicase RecQ [Escherichia coli O83:H1 str. NRG
857C]
gi|315138398|dbj|BAJ45557.1| ATP-dependent DNA helicase RecQ [Escherichia coli DH1]
gi|315284755|gb|EFU44200.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 110-3]
gi|315293200|gb|EFU52552.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 153-1]
gi|320176754|gb|EFW51788.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae CDC 74-1112]
gi|320179831|gb|EFW54778.1| ATP-dependent DNA helicase RecQ [Shigella boydii ATCC 9905]
gi|320191083|gb|EFW65733.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
EC1212]
gi|320639307|gb|EFX08929.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
G5101]
gi|320644692|gb|EFX13742.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str.
493-89]
gi|320650017|gb|EFX18520.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H- str. H
2687]
gi|320655364|gb|EFX23306.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660989|gb|EFX28432.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str. USDA
5905]
gi|320666113|gb|EFX33127.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
LSU-61]
gi|323938957|gb|EGB35176.1| ATP-dependent DNA helicase RecQ [Escherichia coli E482]
gi|323949294|gb|EGB45184.1| ATP-dependent DNA helicase RecQ [Escherichia coli H252]
gi|323954029|gb|EGB49827.1| ATP-dependent DNA helicase RecQ [Escherichia coli H263]
gi|324115715|gb|EGC09650.1| ATP-dependent DNA helicase RecQ [Escherichia coli E1167]
gi|326344280|gb|EGD68040.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1125]
gi|326347892|gb|EGD71606.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
1044]
gi|331036227|gb|EGI08462.1| ATP-dependent DNA helicase RecQ [Escherichia coli H736]
gi|331046829|gb|EGI18913.1| ATP-dependent DNA helicase RecQ [Escherichia coli M718]
gi|331057372|gb|EGI29361.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA143]
gi|331067575|gb|EGI38979.1| ATP-dependent DNA helicase RecQ [Escherichia coli TA280]
gi|332105020|gb|EGJ08366.1| ATP-dependent DNA helicase recQ [Shigella sp. D9]
gi|341921413|gb|EGT71013.1| hypothetical protein C22711_5047 [Escherichia coli O104:H4 str.
C227-11]
gi|342929411|gb|EGU98133.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 79-10]
gi|349740455|gb|AEQ15161.1| ATP-dependent DNA helicase [Escherichia coli O7:K1 str. CE10]
gi|354857604|gb|EHF18058.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C236-11]
gi|354861156|gb|EHF21596.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
C227-11]
gi|354862964|gb|EHF23400.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
04-8351]
gi|354870560|gb|EHF30963.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
09-7901]
gi|354876413|gb|EHF36774.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-3677]
gi|354885260|gb|EHF45564.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4404]
gi|354888660|gb|EHF48915.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4522]
gi|354892140|gb|EHF52353.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4623]
gi|354904405|gb|EHF64498.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354907666|gb|EHF67724.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354910042|gb|EHF70071.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354912556|gb|EHF72556.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C4]
gi|354920351|gb|EHF80286.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-4632 C5]
gi|355349511|gb|EHF98716.1| ATP-dependent DNA helicase RecQ [Escherichia coli cloneA_i1]
gi|355422662|gb|AER86859.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i2']
gi|355427582|gb|AER91778.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. 'clone D
i14']
gi|371591795|gb|EHN80734.1| ATP-dependent DNA helicase recQ [Escherichia coli H494]
gi|371602176|gb|EHN90887.1| ATP-dependent DNA helicase recQ [Escherichia coli H397]
gi|371609589|gb|EHN98126.1| ATP-dependent DNA helicase recQ [Escherichia coli E101]
gi|383476777|gb|EID68710.1| ATP-dependent DNA helicase RecQ [Escherichia coli W26]
gi|384376901|gb|EIE34801.1| ATP-dependent DNA helicase RecQ [Escherichia coli J53]
gi|384472213|gb|EIE56273.1| ATP-dependent DNA helicase RecQ [Escherichia coli AI27]
gi|385537533|gb|EIF84404.1| ATP-dependent DNA helicase recQ [Escherichia coli M919]
gi|385708484|gb|EIG45496.1| ATP-dependent DNA helicase recQ [Escherichia coli H730]
gi|386145721|gb|EIG92178.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0246]
gi|386152885|gb|EIH04174.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.0588]
gi|386165432|gb|EIH31952.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0497]
gi|386170387|gb|EIH42447.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0741]
gi|386219806|gb|EII36270.1| ATP-dependent DNA helicase RecQ [Escherichia coli 4.0967]
gi|386221361|gb|EII43805.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.3916]
gi|386234435|gb|EII66413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 2.4168]
gi|386238032|gb|EII74972.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.2303]
gi|386251828|gb|EIJ01520.1| ATP-dependent DNA helicase RecQ [Escherichia coli B41]
gi|386259703|gb|EIJ15177.1| ATP-dependent DNA helicase RecQ [Escherichia coli 900105 (10e)]
gi|386798508|gb|AFJ31542.1| ATP-dependent DNA helicase RecQ [Escherichia coli Xuzhou21]
gi|388409130|gb|EIL69452.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-1]
gi|388421322|gb|EIL80939.1| ATP-dependent DNA helicase RecQ [Escherichia coli HM605]
gi|408457407|gb|EKJ81203.1| ATP-dependent DNA helicase RecQ [Escherichia coli AD30]
gi|412965200|emb|CCK49130.1| ATP-dependent DNA helicase [Escherichia coli chi7122]
gi|412971785|emb|CCJ46450.1| ATP-dependent DNA helicase [Escherichia coli]
gi|429355564|gb|EKY92252.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02030]
gi|429355754|gb|EKY92439.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02033-1]
gi|429357134|gb|EKY93808.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02092]
gi|429371198|gb|EKZ07757.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02093]
gi|429371402|gb|EKZ07959.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02281]
gi|429375432|gb|EKZ11967.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02318]
gi|429387228|gb|EKZ23670.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-02913]
gi|429389790|gb|EKZ26209.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03439]
gi|429390496|gb|EKZ26908.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-03943]
gi|429400930|gb|EKZ37241.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
11-04080]
gi|429401897|gb|EKZ38191.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429404472|gb|EKZ40747.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429412703|gb|EKZ48894.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429415644|gb|EKZ51805.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429422963|gb|EKZ59072.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429427510|gb|EKZ63592.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429431815|gb|EKZ67858.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429439320|gb|EKZ75307.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429443687|gb|EKZ79637.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429448312|gb|EKZ84227.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429454076|gb|EKZ89941.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec12-0466]
gi|429458539|gb|EKZ94363.1| ATP-dependent DNA helicase recQ [Escherichia coli O104:H4 str.
Ec11-9941]
gi|430873088|gb|ELB96667.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE4]
gi|430883034|gb|ELC06041.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE5]
gi|430890837|gb|ELC13397.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE10]
gi|430903003|gb|ELC24748.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE16]
gi|430903107|gb|ELC24851.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE15]
gi|430913882|gb|ELC35001.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE21]
gi|430932536|gb|ELC52957.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE39]
gi|430935905|gb|ELC56200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE44]
gi|430949889|gb|ELC69284.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE187]
gi|430959658|gb|ELC77969.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE188]
gi|430962773|gb|ELC80625.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE189]
gi|430970881|gb|ELC87926.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE191]
gi|430977239|gb|ELC94090.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE193]
gi|430978984|gb|ELC95773.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE201]
gi|431003540|gb|ELD19023.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE210]
gi|431013410|gb|ELD27143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE212]
gi|431030698|gb|ELD43704.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE214]
gi|431034609|gb|ELD46535.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE220]
gi|431037921|gb|ELD48891.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE224]
gi|431047355|gb|ELD57356.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE230]
gi|431059796|gb|ELD69143.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE233]
gi|431096876|gb|ELE02331.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE53]
gi|431104206|gb|ELE08809.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE55]
gi|431111518|gb|ELE15417.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE56]
gi|431117383|gb|ELE20622.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE58]
gi|431125535|gb|ELE27937.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE60]
gi|431127306|gb|ELE29608.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE62]
gi|431144281|gb|ELE45988.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE67]
gi|431146062|gb|ELE47661.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE72]
gi|431160135|gb|ELE60653.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE77]
gi|431175867|gb|ELE75854.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE81]
gi|431177503|gb|ELE77427.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE86]
gi|431186593|gb|ELE86133.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE87]
gi|431188169|gb|ELE87668.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE93]
gi|431196510|gb|ELE95436.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE111]
gi|431207204|gb|ELF05474.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE119]
gi|431209667|gb|ELF07738.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE142]
gi|431218899|gb|ELF16324.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE156]
gi|431234396|gb|ELF29797.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE161]
gi|431239716|gb|ELF34188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE169]
gi|431239876|gb|ELF34342.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE171]
gi|431278992|gb|ELF69963.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE42]
gi|431289696|gb|ELF80437.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE43]
gi|431293209|gb|ELF83589.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE29]
gi|431299667|gb|ELF89238.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE22]
gi|431321465|gb|ELG09066.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE50]
gi|431323834|gb|ELG11300.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE59]
gi|431325714|gb|ELG13095.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE63]
gi|431335017|gb|ELG22161.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE65]
gi|431335488|gb|ELG22626.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE78]
gi|431347763|gb|ELG34641.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE79]
gi|431352550|gb|ELG39319.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE91]
gi|431373433|gb|ELG59039.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE118]
gi|431377686|gb|ELG62812.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE123]
gi|431392085|gb|ELG75688.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE141]
gi|431400822|gb|ELG84186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE146]
gi|431417427|gb|ELG99890.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE154]
gi|431427140|gb|ELH09183.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE194]
gi|431459357|gb|ELH39670.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE184]
gi|431459691|gb|ELH39983.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE183]
gi|431466733|gb|ELH46750.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE196]
gi|431467349|gb|ELH47359.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE202]
gi|431477546|gb|ELH57314.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE197]
gi|431478399|gb|ELH58147.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE207]
gi|431485180|gb|ELH64844.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE209]
gi|431493841|gb|ELH73433.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE215]
gi|431501796|gb|ELH80772.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE218]
gi|431504472|gb|ELH83098.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE223]
gi|431520867|gb|ELH98186.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE229]
gi|431521765|gb|ELH99004.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE227]
gi|431526226|gb|ELI02985.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE104]
gi|431530167|gb|ELI06852.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE106]
gi|431545604|gb|ELI20252.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE112]
gi|431547922|gb|ELI22215.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE113]
gi|431551988|gb|ELI25951.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE117]
gi|431561551|gb|ELI34918.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE120]
gi|431565593|gb|ELI38672.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE124]
gi|431577598|gb|ELI50229.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE125]
gi|431597335|gb|ELI67242.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE133]
gi|431600495|gb|ELI70165.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE137]
gi|431615751|gb|ELI84873.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE145]
gi|431630352|gb|ELI98689.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE153]
gi|431639691|gb|ELJ07541.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE160]
gi|431642027|gb|ELJ09753.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE163]
gi|431653007|gb|ELJ20124.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE166]
gi|431655382|gb|ELJ22415.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE167]
gi|431657099|gb|ELJ24067.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE168]
gi|431666796|gb|ELJ33421.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE174]
gi|431669744|gb|ELJ36113.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE176]
gi|431683122|gb|ELJ48761.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE179]
gi|431683735|gb|ELJ49363.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE180]
gi|431687667|gb|ELJ53211.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE232]
gi|431701585|gb|ELJ66500.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE88]
gi|431712921|gb|ELJ77188.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE90]
gi|431716632|gb|ELJ80739.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE94]
gi|431727917|gb|ELJ91647.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE97]
gi|431731295|gb|ELJ94801.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE99]
gi|441608587|emb|CCP95671.1| ATP-dependent DNA helicase RecQ [Escherichia coli O10:K5(L):H4 str.
ATCC 23506]
gi|441715872|emb|CCQ04315.1| ATP-dependent DNA helicase RecQ [Escherichia coli Nissle 1917]
Length = 611
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|345301389|ref|YP_004830747.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
gi|345095326|gb|AEN66962.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
Length = 630
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 25 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIDTVLGGRDCLVVMPTGGGKSLCYQVPA 82
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 83 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSTQ 120
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + ++ R +I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+
Sbjct: 121 TREQQLEVMAGCR--TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQ 174
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + + DI+ +L N P+ + S+F R
Sbjct: 175 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRLDIVRLLGLNDPF--IQVSSFDR 231
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 232 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 277
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + H R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 278 QNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 337
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 338 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 397
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 398 AQTCRRLVLLNY 409
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 217/413 (52%), Gaps = 48/413 (11%)
Query: 34 QELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIP 93
+E+ +L+ F F+ Q +AI L+ D+FV MPTG + + A
Sbjct: 460 EEVYYRLRHTFKLPGFRPN-QLEAINSTLI-GKDVFVLMPTGGGKSLCYQLPA------- 510
Query: 94 PGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKA 153
+ +G + + ISP++S +D ++ DL ++S + T+ +
Sbjct: 511 ----IVKSGKTKGTSIVISPLIS----LMQDQVEHLL----DLNIKASMISSKGTTQQRK 558
Query: 154 ILEELRLVKPRIKLLYVTPER-AVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
L + ++ L+Y++PE A ++ +++ L + LA I+VDEAHCVS WGHDFR
Sbjct: 559 QTFSL-FSQGKLDLIYISPEMIASSKQCKRVIKKLYQEGNLARIIVDEAHCVSSWGHDFR 617
Query: 213 PTYRRLGELRQFTGN--SIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLF 269
P Y+ EL F IP++ LTATA V+QDI++ L+ P VF +F R+NLF
Sbjct: 618 PDYK---ELYFFKSEYPKIPMMVLTATANEHVRQDIVTNLRLRNP--VFLKQSFNRTNLF 672
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------ 323
Y+V+ D KDS + E I+ K + GIIYC ++ +A L+
Sbjct: 673 YEVLRKD--KDS---IDEMIDAI--KYHFTEQSGIIYCHSKNSCEKVALQLQNNQIRCGY 725
Query: 324 ----VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
++ ER +Q + R ++ VI AT++FGMGID+ +VRF+ H+ +P ++ YYQE+G
Sbjct: 726 YHAGMDPDERMMIQRDWQRNKLQVICATVAFGMGIDKSDVRFIYHFTVPRTLEGYYQETG 785
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
RAGRDG SYC Y+S ++++ +I+ D+S + E F +++YCE
Sbjct: 786 RAGRDGKPSYCIGYYSMKDVRAIQKMIQKDSSLDKISREKHFDKLQEVMKYCE 838
>gi|417684666|ref|ZP_12334002.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|420327851|ref|ZP_14829589.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|420355277|ref|ZP_14856349.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|421684822|ref|ZP_16124603.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
gi|332088521|gb|EGI93637.1| ATP-dependent DNA helicase RecQ [Shigella boydii 3594-74]
gi|391245516|gb|EIQ04783.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CCH060]
gi|391273146|gb|EIQ31974.1| ATP-dependent DNA helicase RecQ [Shigella boydii 4444-74]
gi|404335343|gb|EJZ61813.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 1485-80]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|260770707|ref|ZP_05879637.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
gi|260614288|gb|EEX39477.1| ATP-dependent DNA helicase RecQ [Vibrio furnissii CIP 102972]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 203/389 (52%), Gaps = 51/389 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+ +F+ + Q++ I + D V MPTG + + A +R G +
Sbjct: 20 LRDVFGYQTFR-DGQQEVIESAVA-GRDALVIMPTGGGKSLCYQIPALAR----EGVTVV 73
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
ISP++S K + +++ E + S Q++ I R
Sbjct: 74 -----------ISPLISLM-------KDQVDQLKANGVAAECVNSTQSREALMGIYN--R 113
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLYV+PER +T F L +L LA I VDEAHC+S+WGHDFRP Y LG
Sbjct: 114 MHSGQLKLLYVSPERVLTGEFIERLHNL----PLAMIAVDEAHCISQWGHDFRPEYAALG 169
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
+L+Q +PI+ALTATA+ + + DI+S L P+ V+ S R N+ Y L
Sbjct: 170 QLKQ-QFPQVPIMALTATADDATRSDILSRLNLTDPH-VYLGSFDRPNIRY------TLM 221
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREH----TTDLADALRRKVNKH------ER 329
+ + V + I D + +CGIIYC +R+ T L + R H ER
Sbjct: 222 EKHKPVSQVIRYL---DTQKGHCGIIYCGSRKKVEMVTEKLCNNHIRAAGYHAGMDADER 278
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE+F R +I ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 279 AYVQEAFQRDDIQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAE 338
Query: 390 CRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+ + L ++ + ++Q+E
Sbjct: 339 AVMLYDPADIAWLRRMLDEKSDGPQKQVE 367
>gi|281420257|ref|ZP_06251256.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281405752|gb|EFB36432.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 620
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 190/366 (51%), Gaps = 50/366 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK+ FG+DSF+ ++AI +++ HD V MPTG + V A
Sbjct: 7 LKSYFGYDSFRP--NQEAIIKEVMQGHDCLVLMPTGGGKSLCYQVPA-----------LA 53
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+ G ISP++S + + K + + E + SG T+ I R
Sbjct: 54 MEGTAVV----ISPLISLMHDQVEALKANGIPA-------EALNSGNDTTDELIIRR--R 100
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
K +KLLYV+PE+ ++E YL ++ K++ VDEAHC+S+WGHDFRP Y +LG
Sbjct: 101 CEKGELKLLYVSPEKLISE-IPYLFSNI----KISLFAVDEAHCISQWGHDFRPEYSQLG 155
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDLLK 279
L + N +P++ALTATA+ ++DII L N + F +S R NL V + K
Sbjct: 156 MLHENFRN-VPVMALTATADKITREDIIRQLHLNG--QTFVSSFDRPNLSLTVRQESTKK 212
Query: 280 DSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHT-------TDL---ADALRRKVNKHER 329
++ FI N GIIYC +R++T DL A A + R
Sbjct: 213 AKLQYITRFI------SNHPEEAGIIYCLSRKNTEMVAQELIDLGINAAAYHAGMTAQTR 266
Query: 330 SRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQSY 389
+ VQE F +I V+ ATI+FGMGID+ NVR+V+H+ MP SI ++YQE GRAGRDG S
Sbjct: 267 ASVQERFKMDQIQVVCATIAFGMGIDKSNVRWVIHYNMPKSIESFYQEIGRAGRDGAPSD 326
Query: 390 CRIYHS 395
+++S
Sbjct: 327 TVLFYS 332
>gi|117922195|ref|YP_871387.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
gi|117614527|gb|ABK49981.1| ATP-dependent DNA helicase RecQ [Shewanella sp. ANA-3]
Length = 607
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/407 (30%), Positives = 220/407 (54%), Gaps = 54/407 (13%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRV 90
+ + L+ +L +FG+ F+ + Q++ I + D V MPTG G + +
Sbjct: 8 IHDDPLSQRLAQVFGYRDFR-DGQREVIERVC-SGEDCLVIMPTGG----GKSLCYQLPA 61
Query: 91 RIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIV-TGRSDLYQLELIVSGQTKT 149
+ PG + +SP++S +D S++ TG + Y + S Q +
Sbjct: 62 LLMPGITIV-----------VSPLIS----LMKDQVDSLLQTGVNAAY----LNSSQPRE 102
Query: 150 ENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGH 209
++ +L +L + +KLLYV+PER +T F ++ L L+ +DEAHC+S+WGH
Sbjct: 103 QSVEVLRQLH--RGELKLLYVSPERLLTGDFIERMRSL----PLSMFAIDEAHCISQWGH 156
Query: 210 DFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLF 269
DFRP Y LG+L+Q + +P++ALTATA+ + +Q+I L N P+++ +S R N+
Sbjct: 157 DFRPEYAALGQLKQLFPH-VPMMALTATADQATRQNICERLGIN-PFRLL-SSFDRPNIR 213
Query: 270 YDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLAD----------A 319
Y V + L ++ +++F+ + + + GI+YC +R ++A+ A
Sbjct: 214 YTVA-EKL--NAANQLRQFLLQ------QNGSSGIVYCSSRRRVDEVAERLILQGFHAKA 264
Query: 320 LRRKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESG 379
+ ER VQ+SF++ +I+++ AT++FGMGI++ NVRFVVH+ +P SI AYYQE+G
Sbjct: 265 YHAGMTPQERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYDIPKSIEAYYQETG 324
Query: 380 RAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLS 426
RAGRDGL++ + + ++I+ ++Q++ N ++
Sbjct: 325 RAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVDFHKLNTMA 371
>gi|423725451|ref|ZP_17699588.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409234575|gb|EKN27403.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI +L +D FV MPTG G + + + G
Sbjct: 7 LTEELKKHFGFDTFKG--NQRAIIENVLAGNDTFVLMPTGG----GKSLCYQLPSLMMQG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + + + NK+ +
Sbjct: 61 TAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKSAI 101
Query: 156 EELR--LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++ + R KLLYV PE E+ +L R +++ VDEAHC+SEWGHDFR
Sbjct: 102 DQVKDDIRNGRTKLLYVAPESLTKDENVEFL-----RQVNISFYAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G P+IALTATA P V+ DI L VFK+S RSNL+Y++
Sbjct: 157 PEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRSNLYYEI 214
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ A++ I K + K N+ + GIIYC +R+ + AD L+
Sbjct: 215 ------RPKTANIDREIIKYI-KSNEGKS-GIIYCLSRKKVEEFADILKANGIKALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 267 GMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C +++ + LE ++ ++E
Sbjct: 327 RDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 359
>gi|423346935|ref|ZP_17324622.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409218596|gb|EKN11564.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI +L +D FV MPTG G + + + G
Sbjct: 7 LTEELKKHFGFDTFKG--NQRAIIENVLAGNDTFVLMPTGG----GKSLCYQLPSLMMQG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + + + NK+ +
Sbjct: 61 TAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKSAI 101
Query: 156 EELR--LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++ + R KLLYV PE E+ +L R +++ VDEAHC+SEWGHDFR
Sbjct: 102 DQVKDDIRNGRTKLLYVAPESLTKDENVEFL-----RQVNISFYAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G P+IALTATA P V+ DI L VFK+S RSNL+Y++
Sbjct: 157 PEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRSNLYYEI 214
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ A++ I K + K N+ + GIIYC +R+ + AD L+
Sbjct: 215 ------RPKTANIDREIIKYI-KSNEGKS-GIIYCLSRKKVEEFADILKANGIKALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 267 GMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C +++ + LE ++ ++E
Sbjct: 327 RDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 359
>gi|424818190|ref|ZP_18243341.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
gi|325499210|gb|EGC97069.1| ATP-dependent DNA helicase RecQ [Escherichia fergusonii ECD227]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I + +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIINTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLEND 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|74314334|ref|YP_312753.1| ATP-dependent DNA helicase RecQ [Shigella sonnei Ss046]
gi|157163298|ref|YP_001460616.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|162135918|ref|YP_026263.3| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|170083303|ref|YP_001732623.1| ATP-dependent DNA helicase RecQ [Escherichia coli str. K-12 substr.
DH10B]
gi|187734194|ref|YP_001882520.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188494940|ref|ZP_03002210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218697543|ref|YP_002405210.1| ATP-dependent DNA helicase RecQ [Escherichia coli 55989]
gi|218701485|ref|YP_002409114.1| ATP-dependent DNA helicase RecQ [Escherichia coli IAI39]
gi|222158515|ref|YP_002558654.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238902897|ref|YP_002928693.1| ATP-dependent DNA helicase RecQ [Escherichia coli BW2952]
gi|254795820|ref|YP_003080657.1| ATP-dependent DNA helicase RecQ [Escherichia coli O157:H7 str.
TW14359]
gi|260857772|ref|YP_003231663.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
11368]
gi|293468140|ref|ZP_06664552.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|383181074|ref|YP_005459079.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|386601849|ref|YP_006103355.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|386616632|ref|YP_006136298.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|386641456|ref|YP_006108254.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|387509272|ref|YP_006161528.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|387609630|ref|YP_006098486.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|388479428|ref|YP_491620.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
W3110]
gi|407466829|ref|YP_006786729.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407484445|ref|YP_006781595.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|410484991|ref|YP_006772537.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|414578705|ref|ZP_11435867.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|415773800|ref|ZP_11486365.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|415786023|ref|ZP_11493337.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|415811064|ref|ZP_11503414.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|415846355|ref|ZP_11525434.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|417583446|ref|ZP_12234244.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|417615484|ref|ZP_12265932.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|417620493|ref|ZP_12270894.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|417631303|ref|ZP_12281535.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|417636778|ref|ZP_12286983.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|417641842|ref|ZP_12291966.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|417675001|ref|ZP_12324430.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|417709647|ref|ZP_12358664.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|417807513|ref|ZP_12454440.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|417829992|ref|ZP_12476531.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|417835254|ref|ZP_12481693.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|417945670|ref|ZP_12588900.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|417977689|ref|ZP_12618470.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|418269891|ref|ZP_12888068.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|418305454|ref|ZP_12917248.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|419043191|ref|ZP_13590168.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|419053701|ref|ZP_13600566.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|419059737|ref|ZP_13606535.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|419065783|ref|ZP_13612482.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|419072168|ref|ZP_13617765.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|419077975|ref|ZP_13623471.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|419083146|ref|ZP_13628587.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|419089130|ref|ZP_13634478.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|419094916|ref|ZP_13640190.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|419100733|ref|ZP_13645918.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|419101663|ref|ZP_13646838.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|419112709|ref|ZP_13657750.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|419117387|ref|ZP_13662394.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|419123336|ref|ZP_13668272.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|419128635|ref|ZP_13673503.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|419134045|ref|ZP_13678868.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|419139187|ref|ZP_13683976.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|419144930|ref|ZP_13689656.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|419150857|ref|ZP_13695502.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|419156337|ref|ZP_13700890.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|419161695|ref|ZP_13706184.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|419166788|ref|ZP_13711235.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|419172782|ref|ZP_13716653.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|419177507|ref|ZP_13721313.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|419183343|ref|ZP_13726948.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|419188957|ref|ZP_13732459.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|419193893|ref|ZP_13737331.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|419212347|ref|ZP_13755409.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|419218190|ref|ZP_13761179.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|419229300|ref|ZP_13772135.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|419235104|ref|ZP_13777867.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|419240508|ref|ZP_13783209.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|419245923|ref|ZP_13788552.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|419251927|ref|ZP_13794490.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|419257379|ref|ZP_13799876.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|419263508|ref|ZP_13805912.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|419264798|ref|ZP_13807187.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|419270449|ref|ZP_13812783.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|419286604|ref|ZP_13828763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|419292039|ref|ZP_13834121.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|419297319|ref|ZP_13839353.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|419308855|ref|ZP_13850743.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|419393861|ref|ZP_13934658.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|419399220|ref|ZP_13939979.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|419404466|ref|ZP_13945182.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|419409630|ref|ZP_13950311.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|419415188|ref|ZP_13955818.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|419812399|ref|ZP_14337266.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|419874689|ref|ZP_14396603.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|419879645|ref|ZP_14401076.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|419902626|ref|ZP_14421829.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|419905653|ref|ZP_14424609.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|420099093|ref|ZP_14610339.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|420110650|ref|ZP_14620605.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|420113527|ref|ZP_14623259.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|420119768|ref|ZP_14629022.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|420126752|ref|ZP_14635465.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|420131499|ref|ZP_14639935.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|420272370|ref|ZP_14774716.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|420277955|ref|ZP_14780233.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|420283156|ref|ZP_14785386.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|420284102|ref|ZP_14786323.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|420289859|ref|ZP_14792029.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|420300926|ref|ZP_14802968.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|420306852|ref|ZP_14808837.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|420312140|ref|ZP_14814065.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|420317897|ref|ZP_14819765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|420322644|ref|ZP_14824463.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|420333543|ref|ZP_14835179.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|420349685|ref|ZP_14851058.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|420361261|ref|ZP_14862203.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|420365796|ref|ZP_14866655.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|420382758|ref|ZP_14882188.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|421814877|ref|ZP_16250576.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|421820625|ref|ZP_16256107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421826602|ref|ZP_16261954.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|421833458|ref|ZP_16268735.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|423728051|ref|ZP_17701830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|424080156|ref|ZP_17817094.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|424086551|ref|ZP_17823020.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|424092965|ref|ZP_17828872.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|424099656|ref|ZP_17834892.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|424105849|ref|ZP_17840562.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|424112488|ref|ZP_17846698.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|424118422|ref|ZP_17852240.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|424124621|ref|ZP_17857901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|424130785|ref|ZP_17863671.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|424137098|ref|ZP_17869517.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|424143655|ref|ZP_17875490.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|424150024|ref|ZP_17881383.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|424163751|ref|ZP_17886802.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|424257401|ref|ZP_17892343.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|424336089|ref|ZP_17898279.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|424452358|ref|ZP_17903983.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|424458522|ref|ZP_17909602.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|424465052|ref|ZP_17915355.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|424471287|ref|ZP_17921068.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|424477774|ref|ZP_17927073.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|424483558|ref|ZP_17932522.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|424489753|ref|ZP_17938273.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|424496448|ref|ZP_17943963.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|424503074|ref|ZP_17949941.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|424509345|ref|ZP_17955696.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|424516755|ref|ZP_17961322.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|424522879|ref|ZP_17966967.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|424528750|ref|ZP_17972445.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|424534892|ref|ZP_17978224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|424540980|ref|ZP_17983908.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|424547130|ref|ZP_17989443.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|424553325|ref|ZP_17995135.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|424559526|ref|ZP_18000903.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|424565847|ref|ZP_18006833.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|424571976|ref|ZP_18012493.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|424578134|ref|ZP_18018151.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|424583956|ref|ZP_18023586.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|424746311|ref|ZP_18174557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424756582|ref|ZP_18184393.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425100630|ref|ZP_18503350.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|425106704|ref|ZP_18509003.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|425112706|ref|ZP_18514611.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|425117443|ref|ZP_18519216.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|425122162|ref|ZP_18523834.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|425128636|ref|ZP_18529790.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|425134402|ref|ZP_18535238.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|425140995|ref|ZP_18541361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|425146671|ref|ZP_18546648.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|425152786|ref|ZP_18552384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|425158685|ref|ZP_18557932.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|425165005|ref|ZP_18563876.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|425170752|ref|ZP_18569210.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|425176796|ref|ZP_18574900.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|425182855|ref|ZP_18580536.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|425189156|ref|ZP_18586411.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|425195883|ref|ZP_18592638.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|425202362|ref|ZP_18598555.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|425208739|ref|ZP_18604521.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|425214496|ref|ZP_18609883.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|425220623|ref|ZP_18615570.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|425227269|ref|ZP_18621720.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|425233426|ref|ZP_18627450.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|425239348|ref|ZP_18633053.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|425245582|ref|ZP_18638874.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|425251778|ref|ZP_18644706.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|425257577|ref|ZP_18650057.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|425263832|ref|ZP_18655808.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|425269824|ref|ZP_18661435.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|425275115|ref|ZP_18666494.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|425285691|ref|ZP_18676703.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|425291039|ref|ZP_18681846.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|425297302|ref|ZP_18687410.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|425313995|ref|ZP_18703147.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|425319977|ref|ZP_18708738.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|425326116|ref|ZP_18714427.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|425332427|ref|ZP_18720224.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|425338604|ref|ZP_18725927.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|425344898|ref|ZP_18731771.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|425350737|ref|ZP_18737180.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|425357009|ref|ZP_18743055.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|425362958|ref|ZP_18748590.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|425369225|ref|ZP_18754286.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|425375530|ref|ZP_18760154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|425382165|ref|ZP_18766145.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|425388417|ref|ZP_18771960.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|425395144|ref|ZP_18778235.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|425401199|ref|ZP_18783889.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|425407294|ref|ZP_18789499.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|425413652|ref|ZP_18795398.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|425419968|ref|ZP_18801223.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|425431264|ref|ZP_18811857.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|428949672|ref|ZP_19021928.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|428955744|ref|ZP_19027518.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|428961768|ref|ZP_19033029.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|428968370|ref|ZP_19039058.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|428974146|ref|ZP_19044441.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|428980535|ref|ZP_19050328.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|428986311|ref|ZP_19055684.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|428992459|ref|ZP_19061431.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|428998356|ref|ZP_19066931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|429004744|ref|ZP_19072788.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|429010783|ref|ZP_19078163.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|429017247|ref|ZP_19084107.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|429023086|ref|ZP_19089586.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|429029170|ref|ZP_19095125.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|429035310|ref|ZP_19100818.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|429041420|ref|ZP_19106492.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|429047246|ref|ZP_19111942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|429052597|ref|ZP_19117153.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|429058154|ref|ZP_19122396.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|429063674|ref|ZP_19127630.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|429069876|ref|ZP_19133298.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|429075653|ref|ZP_19138895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|429080853|ref|ZP_19143978.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429829081|ref|ZP_19360059.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429835546|ref|ZP_19365772.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443619893|ref|YP_007383749.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444927567|ref|ZP_21246820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444933176|ref|ZP_21252172.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444938639|ref|ZP_21257361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444944245|ref|ZP_21262719.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444949646|ref|ZP_21267927.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444955383|ref|ZP_21273438.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444960749|ref|ZP_21278560.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444965954|ref|ZP_21283505.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444972010|ref|ZP_21289338.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444977298|ref|ZP_21294364.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444982637|ref|ZP_21299533.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444988047|ref|ZP_21304814.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444993429|ref|ZP_21310059.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444998607|ref|ZP_21315096.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|445004152|ref|ZP_21320531.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|445009571|ref|ZP_21325789.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|445014650|ref|ZP_21330744.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|445020572|ref|ZP_21336526.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|445025933|ref|ZP_21341746.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|445031388|ref|ZP_21347043.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|445036812|ref|ZP_21352329.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|445042490|ref|ZP_21357851.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|445047694|ref|ZP_21362931.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|445061301|ref|ZP_21373807.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|450226865|ref|ZP_21897539.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|450252923|ref|ZP_21902297.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
gi|54041622|sp|P15043.5|RECQ_ECOLI RecName: Full=ATP-dependent DNA helicase RecQ
gi|48994977|gb|AAT48221.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MG1655]
gi|73857811|gb|AAZ90518.1| ATP-dependent DNA helicase [Shigella sonnei Ss046]
gi|85676229|dbj|BAE77479.1| ATP-dependent DNA helicase [Escherichia coli str. K12 substr.
W3110]
gi|157068978|gb|ABV08233.1| ATP-dependent DNA helicase RecQ [Escherichia coli HS]
gi|169891138|gb|ACB04845.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
DH10B]
gi|187431186|gb|ACD10460.1| ATP-dependent DNA helicase RecQ [Shigella boydii CDC 3083-94]
gi|188490139|gb|EDU65242.1| ATP-dependent DNA helicase RecQ [Escherichia coli 53638]
gi|218354275|emb|CAV00962.1| ATP-dependent DNA helicase [Escherichia coli 55989]
gi|218371471|emb|CAR19306.1| ATP-dependent DNA helicase [Escherichia coli IAI39]
gi|222035520|emb|CAP78265.1| ATP-dependent DNA helicase recQ [Escherichia coli LF82]
gi|238860042|gb|ACR62040.1| ATP-dependent DNA helicase [Escherichia coli BW2952]
gi|254595220|gb|ACT74581.1| ATP-dependent DNA helicase [Escherichia coli O157:H7 str. TW14359]
gi|257756421|dbj|BAI27923.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
11368]
gi|284923930|emb|CBG37029.1| ATP-dependent DNA helicase [Escherichia coli 042]
gi|291321518|gb|EFE60956.1| ATP-dependent DNA helicase RecQ [Escherichia coli B088]
gi|294490610|gb|ADE89366.1| ATP-dependent DNA helicase RecQ [Escherichia coli IHE3034]
gi|307555948|gb|ADN48723.1| ATP-dependent DNA helicase RecQ [Escherichia coli ABU 83972]
gi|315618731|gb|EFU99316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3431]
gi|323155231|gb|EFZ41415.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPECa14]
gi|323167577|gb|EFZ53283.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 53G]
gi|323173439|gb|EFZ59068.1| ATP-dependent DNA helicase RecQ [Escherichia coli LT-68]
gi|332084978|gb|EGI90160.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 155-74]
gi|332345801|gb|AEE59135.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNK88]
gi|332996969|gb|EGK16587.1| ATP-dependent DNA helicase RecQ [Shigella flexneri VA-6]
gi|335573445|gb|EGM59800.1| ATP-dependent DNA helicase RecQ [Shigella flexneri J1713]
gi|339417552|gb|AEJ59224.1| ATP-dependent DNA helicase RecQ [Escherichia coli UMNF18]
gi|340731834|gb|EGR60973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
01-09591]
gi|340737771|gb|EGR72025.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
LB226692]
gi|342362570|gb|EGU26687.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH140A]
gi|344192682|gb|EGV46771.1| ATP-dependent DNA helicase RecQ [Escherichia coli XH001]
gi|345333780|gb|EGW66227.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_B2F1]
gi|345357660|gb|EGW89852.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_EH250]
gi|345369561|gb|EGX01544.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_MHI813]
gi|345369710|gb|EGX01692.1| ATP-dependent DNA helicase RecQ [Escherichia coli G58-1]
gi|345384846|gb|EGX14704.1| ATP-dependent DNA helicase RecQ [Escherichia coli STEC_S1191]
gi|345389797|gb|EGX19598.1| ATP-dependent DNA helicase RecQ [Escherichia coli TX1999]
gi|359333954|dbj|BAL40401.1| ATP-dependent DNA helicase [Escherichia coli str. K-12 substr.
MDS42]
gi|374361266|gb|AEZ42973.1| ATP-dependent DNA helicase RecQ [Escherichia coli O55:H7 str.
RM12579]
gi|377889383|gb|EHU53847.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3B]
gi|377900947|gb|EHU65271.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3A]
gi|377901914|gb|EHU66224.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3C]
gi|377903769|gb|EHU68059.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3D]
gi|377906294|gb|EHU70540.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3E]
gi|377916995|gb|EHU81064.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC3F]
gi|377923006|gb|EHU86977.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4A]
gi|377926673|gb|EHU90603.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4B]
gi|377937309|gb|EHV01090.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4D]
gi|377937816|gb|EHV01589.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4C]
gi|377952265|gb|EHV15861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4F]
gi|377957081|gb|EHV20618.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC4E]
gi|377957368|gb|EHV20903.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5A]
gi|377960982|gb|EHV24457.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5B]
gi|377969378|gb|EHV32756.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5C]
gi|377970401|gb|EHV33763.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5D]
gi|377980238|gb|EHV43504.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC5E]
gi|377988783|gb|EHV51958.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6B]
gi|377989115|gb|EHV52284.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6A]
gi|377992641|gb|EHV55787.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6C]
gi|378003621|gb|EHV66662.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6D]
gi|378006269|gb|EHV69255.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC6E]
gi|378010076|gb|EHV73023.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7A]
gi|378020960|gb|EHV83688.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7C]
gi|378023963|gb|EHV86628.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7D]
gi|378028415|gb|EHV91033.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7B]
gi|378035128|gb|EHV97690.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC7E]
gi|378048184|gb|EHW10539.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8C]
gi|378057740|gb|EHW19963.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC8D]
gi|378068432|gb|EHW30533.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9A]
gi|378073450|gb|EHW35501.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9B]
gi|378078658|gb|EHW40639.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9C]
gi|378086522|gb|EHW48397.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9D]
gi|378088985|gb|EHW50834.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC9E]
gi|378096895|gb|EHW58661.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10A]
gi|378102153|gb|EHW63835.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10B]
gi|378119748|gb|EHW81237.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10C]
gi|378121916|gb|EHW83364.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10D]
gi|378124653|gb|EHW86058.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11A]
gi|378125192|gb|EHW86594.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC10F]
gi|378138180|gb|EHW99439.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11B]
gi|378144053|gb|EHX05229.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC11D]
gi|378233768|gb|EHX93852.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15A]
gi|378239942|gb|EHX99919.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15B]
gi|378242825|gb|EHY02776.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15C]
gi|378250902|gb|EHY10804.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15D]
gi|378255628|gb|EHY15485.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC15E]
gi|385154769|gb|EIF16778.1| ATP-dependent DNA helicase RecQ [Escherichia coli O32:H37 str. P4]
gi|388350582|gb|EIL15941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9534]
gi|388370946|gb|EIL34439.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9545]
gi|388373611|gb|EIL36859.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9942]
gi|388380812|gb|EIL43394.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10026]
gi|390637133|gb|EIN16689.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1996]
gi|390637513|gb|EIN17059.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA505]
gi|390638307|gb|EIN17820.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA517]
gi|390655763|gb|EIN33679.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1985]
gi|390656665|gb|EIN34525.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93-001]
gi|390659431|gb|EIN37196.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1990]
gi|390673956|gb|EIN50168.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA3]
gi|390677280|gb|EIN53339.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA5]
gi|390680714|gb|EIN56541.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA9]
gi|390691815|gb|EIN66538.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA10]
gi|390696174|gb|EIN70668.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA14]
gi|390697410|gb|EIN71830.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA15]
gi|390711245|gb|EIN84228.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA22]
gi|390717538|gb|EIN90322.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA24]
gi|390718182|gb|EIN90940.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA25]
gi|390724300|gb|EIN96860.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA28]
gi|390736865|gb|EIO08185.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA31]
gi|390737487|gb|EIO08782.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA32]
gi|390741100|gb|EIO12195.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA33]
gi|390755766|gb|EIO25297.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA40]
gi|390758421|gb|EIO27875.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA39]
gi|390761852|gb|EIO31126.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA41]
gi|390764847|gb|EIO34042.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA42]
gi|390779055|gb|EIO46792.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW06591]
gi|390786025|gb|EIO53561.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW07945]
gi|390796590|gb|EIO63861.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10246]
gi|390799973|gb|EIO67092.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09098]
gi|390803163|gb|EIO70187.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW11039]
gi|390804554|gb|EIO71520.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09109]
gi|390813588|gb|EIO80198.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW10119]
gi|390821916|gb|EIO88072.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW09195]
gi|390822385|gb|EIO88509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4203]
gi|390827531|gb|EIO93291.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4196]
gi|390840654|gb|EIP04669.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14313]
gi|390842695|gb|EIP06532.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW14301]
gi|390847735|gb|EIP11259.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4421]
gi|390858215|gb|EIP20623.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4422]
gi|390862503|gb|EIP24686.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4013]
gi|390866548|gb|EIP28505.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4402]
gi|390874830|gb|EIP35918.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4439]
gi|390880191|gb|EIP40894.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4436]
gi|390890079|gb|EIP49765.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4437]
gi|390891420|gb|EIP51051.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC4448]
gi|390897852|gb|EIP57152.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1738]
gi|390905830|gb|EIP64755.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1734]
gi|390915489|gb|EIP74001.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1845]
gi|390915828|gb|EIP74328.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1863]
gi|391244920|gb|EIQ04196.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2850-71]
gi|391245159|gb|EIQ04433.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-1770]
gi|391265596|gb|EIQ24564.1| ATP-dependent DNA helicase RecQ [Shigella boydii 965-58]
gi|391277456|gb|EIQ36200.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3226-85]
gi|391280624|gb|EIQ39291.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 3233-85]
gi|391291630|gb|EIQ50010.1| ATP-dependent DNA helicase RecQ [Shigella sonnei 4822-66]
gi|391297979|gb|EIQ56004.1| ATP-dependent DNA helicase RecQ [Shigella dysenteriae 225-75]
gi|394391248|gb|EJE68134.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10224]
gi|394402810|gb|EJE78500.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9553]
gi|394411617|gb|EJE85840.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10021]
gi|394423765|gb|EJE96980.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CVM9455]
gi|394430839|gb|EJF03117.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM10030]
gi|394431778|gb|EJF03941.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CVM9952]
gi|397894923|gb|EJL11359.1| ATP-dependent DNA helicase RecQ [Shigella sonnei str. Moseley]
gi|406780153|gb|AFS59577.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407056742|gb|AFS76793.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2011C-3493]
gi|407062864|gb|AFS83911.1| ATP-dependent DNA helicase RecQ [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408061419|gb|EKG95938.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA7]
gi|408063920|gb|EKG98407.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK920]
gi|408065096|gb|EKG99572.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA34]
gi|408075235|gb|EKH09473.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA506]
gi|408080230|gb|EKH14314.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA507]
gi|408088415|gb|EKH21787.1| ATP-dependent DNA helicase RecQ [Escherichia coli FDA504]
gi|408094586|gb|EKH27603.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1999]
gi|408100770|gb|EKH33252.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK1997]
gi|408105693|gb|EKH37840.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE1487]
gi|408112433|gb|EKH44083.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE037]
gi|408118686|gb|EKH49805.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK2001]
gi|408125003|gb|EKH55643.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA4]
gi|408134793|gb|EKH64609.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA23]
gi|408136802|gb|EKH66532.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA49]
gi|408143753|gb|EKH73027.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA45]
gi|408152134|gb|EKH80583.1| ATP-dependent DNA helicase RecQ [Escherichia coli TT12B]
gi|408157176|gb|EKH85342.1| ATP-dependent DNA helicase RecQ [Escherichia coli MA6]
gi|408161220|gb|EKH89191.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5905]
gi|408170320|gb|EKH97532.1| ATP-dependent DNA helicase RecQ [Escherichia coli CB7326]
gi|408177268|gb|EKI04083.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC96038]
gi|408180273|gb|EKI06898.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5412]
gi|408189631|gb|EKI15342.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW15901]
gi|408197818|gb|EKI23069.1| ATP-dependent DNA helicase RecQ [Escherichia coli TW00353]
gi|408208793|gb|EKI33413.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3006]
gi|408210666|gb|EKI35226.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA38]
gi|408223507|gb|EKI47276.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1735]
gi|408234880|gb|EKI57873.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1736]
gi|408237737|gb|EKI60587.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1737]
gi|408242911|gb|EKI65462.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1846]
gi|408251792|gb|EKI73509.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1847]
gi|408256146|gb|EKI77539.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1848]
gi|408262801|gb|EKI83715.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1849]
gi|408271059|gb|EKI91208.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1850]
gi|408274185|gb|EKI94210.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1856]
gi|408282088|gb|EKJ01436.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1862]
gi|408288474|gb|EKJ07297.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1864]
gi|408293101|gb|EKJ11565.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1865]
gi|408303336|gb|EKJ20798.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1868]
gi|408304519|gb|EKJ21944.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1866]
gi|408315855|gb|EKJ32154.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1869]
gi|408321307|gb|EKJ37346.1| ATP-dependent DNA helicase RecQ [Escherichia coli EC1870]
gi|408323034|gb|EKJ39003.1| ATP-dependent DNA helicase RecQ [Escherichia coli NE098]
gi|408334009|gb|EKJ48917.1| ATP-dependent DNA helicase RecQ [Escherichia coli FRIK523]
gi|408341948|gb|EKJ56384.1| ATP-dependent DNA helicase RecQ [Escherichia coli 0.1304]
gi|408544804|gb|EKK22250.1| ATP-dependent DNA helicase RecQ [Escherichia coli 5.2239]
gi|408545335|gb|EKK22771.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4870]
gi|408545856|gb|EKK23279.1| ATP-dependent DNA helicase RecQ [Escherichia coli 6.0172]
gi|408563231|gb|EKK39371.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0566]
gi|408563445|gb|EKK39578.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0586]
gi|408564373|gb|EKK40483.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0569]
gi|408575663|gb|EKK51316.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0833]
gi|408578574|gb|EKK54091.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.2524]
gi|408588317|gb|EKK62900.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0869]
gi|408593310|gb|EKK67634.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.0221]
gi|408599002|gb|EKK72934.1| ATP-dependent DNA helicase RecQ [Escherichia coli 8.0416]
gi|408608686|gb|EKK82072.1| ATP-dependent DNA helicase RecQ [Escherichia coli 10.0821]
gi|421948409|gb|EKU05429.1| ATP-dependent DNA helicase RecQ [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421949627|gb|EKU06557.1| ATP-dependent DNA helicase RecQ [Escherichia coli O111:H11 str.
CFSAN001630]
gi|427201317|gb|EKV71710.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1042]
gi|427201385|gb|EKV71774.1| ATP-dependent DNA helicase RecQ [Escherichia coli 89.0511]
gi|427204734|gb|EKV75006.1| ATP-dependent DNA helicase RecQ [Escherichia coli 88.1467]
gi|427217586|gb|EKV86644.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0091]
gi|427221262|gb|EKV90123.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.2281]
gi|427224265|gb|EKV92982.1| ATP-dependent DNA helicase RecQ [Escherichia coli 90.0039]
gi|427237737|gb|EKW05261.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0056]
gi|427238116|gb|EKW05636.1| ATP-dependent DNA helicase RecQ [Escherichia coli 93.0055]
gi|427242488|gb|EKW09895.1| ATP-dependent DNA helicase RecQ [Escherichia coli 94.0618]
gi|427255805|gb|EKW22046.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0183]
gi|427257425|gb|EKW23551.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0943]
gi|427257996|gb|EKW24110.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.1288]
gi|427273047|gb|EKW37747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0428]
gi|427274751|gb|EKW39394.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0427]
gi|427280527|gb|EKW44885.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0939]
gi|427289002|gb|EKW52599.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0932]
gi|427295793|gb|EKW58875.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0107]
gi|427297634|gb|EKW60664.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0003]
gi|427307738|gb|EKW70166.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.1742]
gi|427310706|gb|EKW72942.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0007]
gi|427315500|gb|EKW77496.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0672]
gi|427324990|gb|EKW86445.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0678]
gi|427326402|gb|EKW87820.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0713]
gi|429250725|gb|EKY35374.1| ATP-dependent DNA helicase RecQ [Escherichia coli 96.0109]
gi|429251161|gb|EKY35784.1| ATP-dependent DNA helicase RecQ [Escherichia coli 97.0010]
gi|443424401|gb|AGC89305.1| ATP-dependent DNA helicase RecQ [Escherichia coli APEC O78]
gi|444534888|gb|ELV15066.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0814]
gi|444536334|gb|ELV16361.1| ATP-dependent DNA helicase RecQ [Escherichia coli 09BKT078844]
gi|444545204|gb|ELV24138.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0815]
gi|444554349|gb|ELV31919.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0816]
gi|444554556|gb|ELV32113.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0839]
gi|444559217|gb|ELV36456.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0848]
gi|444568882|gb|ELV45531.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1753]
gi|444572276|gb|ELV48715.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1775]
gi|444575846|gb|ELV52071.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1793]
gi|444587827|gb|ELV63229.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1805]
gi|444589282|gb|ELV64624.1| ATP-dependent DNA helicase RecQ [Escherichia coli ATCC 700728]
gi|444589460|gb|ELV64795.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA11]
gi|444603190|gb|ELV77901.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA19]
gi|444603275|gb|ELV77985.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA13]
gi|444612464|gb|ELV86757.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA2]
gi|444618782|gb|ELV92849.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA47]
gi|444620257|gb|ELV94266.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA48]
gi|444626765|gb|ELW00555.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA8]
gi|444635256|gb|ELW08688.1| ATP-dependent DNA helicase RecQ [Escherichia coli 7.1982]
gi|444637104|gb|ELW10480.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1781]
gi|444642183|gb|ELW15387.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.1762]
gi|444651734|gb|ELW24530.1| ATP-dependent DNA helicase RecQ [Escherichia coli PA35]
gi|444657008|gb|ELW29510.1| ATP-dependent DNA helicase RecQ [Escherichia coli 3.4880]
gi|444666687|gb|ELW38747.1| ATP-dependent DNA helicase RecQ [Escherichia coli 99.0670]
gi|449313574|gb|EMD03779.1| ATP-dependent DNA helicase RecQ [Escherichia coli O08]
gi|449314202|gb|EMD04376.1| ATP-dependent DNA helicase RecQ [Escherichia coli S17]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|433323990|ref|ZP_20401319.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|433327299|ref|ZP_20403746.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432344992|gb|ELL39536.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
gi|432347541|gb|ELL42000.1| ATP-dependent DNA helicase RecQ [Escherichia coli J96]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|417714622|ref|ZP_12363574.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|417719543|ref|ZP_12368424.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
gi|332998230|gb|EGK17832.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|333013771|gb|EGK33134.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKQQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|251793708|ref|YP_003008438.1| ATP-dependent DNA helicase RecQ [Aggregatibacter aphrophilus
NJ8700]
gi|247535105|gb|ACS98351.1| ATP-dependent DNA helicase RecQ [Aggregatibacter aphrophilus
NJ8700]
Length = 631
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/390 (31%), Positives = 200/390 (51%), Gaps = 53/390 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L ++FG+ SF+ Q+ I H L D V M TG + +S P F
Sbjct: 36 LHSVFGYQSFRKGQQE--IIHAALSGQDCLVIMATG---------TGKSLCYQIPALCF- 83
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + R++ + + + S QT E + + + R
Sbjct: 84 -----DGMTLVVSPLISLM-------KDQVDQLRTNGIEADYLNSTQTFEEQQQV--QNR 129
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+ ++KLLY++PE+ +T SF + H +++I +DEAHC+S+WGHDFRP Y +LG
Sbjct: 130 AISGQLKLLYLSPEKVMTNSFFQFISHC----NVSFIAIDEAHCISQWGHDFRPEYTQLG 185
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
L+ +PI+ALTATA+ + +QDI+ L+ N+P+ F +F R N+ Y ++
Sbjct: 186 GLKG-CFPKVPIMALTATADQTTQQDILQNLRLNRPH--FHVGSFDRPNIRYTLV----- 237
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKHE 328
+ + +++ L + K+ GI+YC +R +A+ L K +
Sbjct: 238 -EKFKPMEQLCRFVLAQKGKS---GIVYCNSRNKVERIAETLCNKGVRAAAYHAGMENTL 293
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R +VQ F R I V+ ATI+FGMGI++ NVRFV H+ +P SI +YYQE+GRAGRD L +
Sbjct: 294 REKVQRDFQRDNIQVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPA 353
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLE 418
+++ L ++ T + Q+E
Sbjct: 354 EAVLFYDPADYVWLNKILMEKPETPQRQIE 383
>gi|427707114|ref|YP_007049491.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
gi|427359619|gb|AFY42341.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
Length = 718
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/412 (33%), Positives = 208/412 (50%), Gaps = 59/412 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
L LK FG+D F+ Q+K I L + D+ V MPTG G + + + G
Sbjct: 7 LEQALKYHFGYDQFRPG-QRKIIEDAL-QNRDLLVVMPTGG----GKSLCFQLPALVKKG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFY-----LRFRDDKTSIVTGRSDLYQLELIVSGQTKTE 150
+ +SP+++ LR + + + + YQ+ ++
Sbjct: 61 LTVV-----------VSPLIALMQDQVEALRNNNISATFLNSSLNPYQV--------RSR 101
Query: 151 NKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHD 210
+AIL +++LLYV PER ++E F L + ++ +DEAHCVSEWGHD
Sbjct: 102 EEAIL------NGKVRLLYVAPERLMSERFLPFLDLVHHQVGISTFAIDEAHCVSEWGHD 155
Query: 211 FRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFY 270
FRP YR+L LR + +P+IALTATA V+ DII + +P + S R NL+Y
Sbjct: 156 FRPEYRQLRSLRSRYPH-VPMIALTATATERVRSDIIQQIGLKQP-SIHIASFNRQNLYY 213
Query: 271 DVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK------- 323
+V K +YA + E I + G IIYC TR+ +L L+
Sbjct: 214 EV--RPKTKYAYAELLELIREIDG-------SAIIYCLTRKKVDELTFKLQNDKVSVLAY 264
Query: 324 ---VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGR 380
++ ERS+ Q F+R + V+ ATI+FGMGI++ +VR V+H+ +P ++ +YYQESGR
Sbjct: 265 HAGLSDEERSKNQTRFIRDDARVMVATIAFGMGINKPDVRLVIHFDIPRNLESYYQESGR 324
Query: 381 AGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
AGRDG S C I+ S K++E+ I T + EQL K + M++Y E
Sbjct: 325 AGRDGEPSRCTIFFSFGDIKTIEWSINQKTDAQ-EQLIAK-QQLRQMIDYAE 374
>gi|419926481|ref|ZP_14444247.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
gi|388382669|gb|EIL44516.1| ATP-dependent DNA helicase RecQ [Escherichia coli 541-15]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|298206967|ref|YP_003715146.1| ATP-dependent DNA helicase recQ [Croceibacter atlanticus HTCC2559]
gi|83849601|gb|EAP87469.1| ATP-dependent DNA helicase recQ [Croceibacter atlanticus HTCC2559]
Length = 698
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 187/370 (50%), Gaps = 53/370 (14%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
+T LK FG+DSFK ++AI + +L D MPTG G + + G
Sbjct: 8 ITQLLKTHFGYDSFKP--NQEAIINDVLSGKDTLAIMPTGG----GKSLCYQLPALAKEG 61
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ K + R++ S Q + E + +L
Sbjct: 62 TALV-----------ISPLIALM-------KDQVDALRANGITAAYYNSSQPEEEQQHVL 103
Query: 156 EELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTY 215
++L K + L YV PE L+H + L I VDEAHC+S WGHDFRP Y
Sbjct: 104 QQL--TKGELSLFYVAPESLPN------LRHTISTITLNLIAVDEAHCISAWGHDFRPAY 155
Query: 216 RRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFD 275
+LG L+Q IPIIALTATA+ + + DI L + K S R NLF DV
Sbjct: 156 TKLGSLKQ-EFPQIPIIALTATADKATQDDISKQLNISHAKKHL-ASFDRQNLFLDV--- 210
Query: 276 DLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VN 325
+ + +K+ + K LG + GIIYC +R+ T LA L++ ++
Sbjct: 211 ---RPGQSRIKQIL-KFLGP--RGAQSGIIYCLSRKSTEKLAQKLKQAGYKAKAYHAGLS 264
Query: 326 KHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDG 385
+R+ +QE F+ +I ATI+FGMGID+ NVR+V+H+ MP +I YYQE GRAGRDG
Sbjct: 265 PEDRANIQEDFVNDTTPIIVATIAFGMGIDKSNVRWVIHYNMPKNIEGYYQEIGRAGRDG 324
Query: 386 LQSYCRIYHS 395
L+++ +++S
Sbjct: 325 LKAHTLLFYS 334
>gi|383815908|ref|ZP_09971314.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
gi|383295198|gb|EIC83526.1| ATP-dependent DNA helicase RecQ [Serratia sp. M24T3]
Length = 610
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/430 (30%), Positives = 215/430 (50%), Gaps = 65/430 (15%)
Query: 31 VSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARS 88
V +EL A+ L+ FG+ F+ ++ I + + D V MPTG + + A
Sbjct: 6 VINKELLAEQVLRDTFGYQQFRPG--QQTIINAAILGKDCLVVMPTGGGKSLCYQIPA-- 61
Query: 89 RVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTK 148
+++G ++ ++S +D ++ + L S QT+
Sbjct: 62 ---------LVMDG--------LTLVVSPLISLMKDQVDQLMAAGVEAGCLN---STQTR 101
Query: 149 TENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWG 208
+ + ++ R RIK+LY+ PER F L+ L ++N A + VDEAHC+S+WG
Sbjct: 102 EQQQEVMAGCR--SGRIKMLYIAPERLTMGDF---LEQLQQWNP-AMLAVDEAHCISQWG 155
Query: 209 HDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSN 267
HDFRP YR LG+L+ +P+IALTATA+ + + DI+ +L+ N P + + S+F R N
Sbjct: 156 HDFRPEYRALGQLK-LRYPQLPVIALTATADDATRNDIVRLLELNDP--LVQVSSFDRPN 212
Query: 268 LFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRR 322
+ Y ++ D LL+ F++ GK GIIYC +R D A L+
Sbjct: 213 IRYTLVEKFKPLDQLLR--------FVQDQRGKS------GIIYCGSRAKVEDTAARLQS 258
Query: 323 K----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIP 372
+ + RS+VQE+F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I
Sbjct: 259 RGISVGAYHAGLENDRRSQVQEAFQRDDVQIVVATVAFGMGINKPNVRFVVHFDIPRNIE 318
Query: 373 AYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCE 432
+YYQE+GRAGRDGL + + + L + + ++ +E N + +
Sbjct: 319 SYYQETGRAGRDGLPAEALLLYDPADMAWLRRCLDEKPAGPQQDVERHKLNAMGAFAEAQ 378
Query: 433 QGYFLVILVF 442
LV+L +
Sbjct: 379 TCRRLVLLNY 388
>gi|423343078|ref|ZP_17320792.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|409216754|gb|EKN09737.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 726
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI +L +D FV MPTG G + + + G
Sbjct: 7 LTEELKKHFGFDTFKG--NQRAIIENVLAGNDTFVLMPTGG----GKSLCYQLPSLMMQG 60
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + + + NK+ +
Sbjct: 61 TAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKSAI 101
Query: 156 EELR--LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++ + R KLLYV PE E+ +L R +++ VDEAHC+SEWGHDFR
Sbjct: 102 DQVKDDIRSGRTKLLYVAPESLTKDENVEFL-----RQVNISFYAVDEAHCISEWGHDFR 156
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G P+IALTATA P V+ DI L VFK+S RSNL+Y++
Sbjct: 157 PEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRSNLYYEI 214
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ A++ I K + K N+ + GIIYC +R+ + AD L+
Sbjct: 215 ------RPKTANIDREIIKYI-KSNEGKS-GIIYCLSRKKVEEFADILKANGIKALPYHA 266
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 267 GMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 326
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C +++ + LE ++ ++E
Sbjct: 327 RDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 359
>gi|7428315|pir||BVECRQ DNA helicase recQ - Escherichia coli (strain K-12)
Length = 610
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|365972647|ref|YP_004954208.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
gi|365751560|gb|AEW75787.1| ATP-dependent DNA helicase recQ [Enterobacter cloacae EcWSU1]
Length = 630
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 216/432 (50%), Gaps = 65/432 (15%)
Query: 29 GKVSEQELTAK--LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSA 86
+V QE AK L FG+ F+ ++ I +L D V MPTG + V A
Sbjct: 25 AEVLNQESLAKQVLHETFGYQQFRP--GQETIIETVLEGRDCLVVMPTGGGKSLCYQVPA 82
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+LNG ++ ++S +D ++ ++ + S Q
Sbjct: 83 -----------LVLNG--------LTVVVSPLISLMKDQVDQLL---ANGVAAACLNSSQ 120
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
T+ + + ++ R +++LLY+ PER + ++F L HL +N + + VDEAHC+S+
Sbjct: 121 TREQQQEVMAGCR--TGQVRLLYIAPERLMLDNF---LDHLSHWNPV-LLAVDEAHCISQ 174
Query: 207 WGHDFRPTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-R 265
WGHDFRP Y LG+LRQ +P +ALTATA+ + +QDI+ +L N P + + S+F R
Sbjct: 175 WGHDFRPEYAALGQLRQ-RFPELPFMALTATADDTTRQDIVRLLGLNDP--LIQVSSFDR 231
Query: 266 SNLFYDVI-----FDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL 320
N+ Y ++ D LL+ ++++ GK GIIYC +R D A L
Sbjct: 232 PNIRYMLMEKFKPLDQLLR--------YVQEQRGKS------GIIYCNSRAKVEDTAARL 277
Query: 321 RRK----------VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSS 370
+ + + R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +
Sbjct: 278 QNRGFSAAAYHAGLENAVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 337
Query: 371 IPAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEY 430
I +YYQE+GRAGRDGL + +++ L ++ + + +E N +
Sbjct: 338 IESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAE 397
Query: 431 CEQGYFLVILVF 442
+ LV+L +
Sbjct: 398 AQTCRRLVLLNY 409
>gi|432855825|ref|ZP_20083516.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
gi|431397110|gb|ELG80571.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE144]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLTHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|417692248|ref|ZP_12341449.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
gi|332084419|gb|EGI89615.1| ATP-dependent DNA helicase RecQ [Shigella boydii 5216-82]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|415799701|ref|ZP_11498958.1| ATP-dependent DNA helicase RecQ [Escherichia coli E128010]
gi|419319320|ref|ZP_13861114.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12A]
gi|419325342|ref|ZP_13867026.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12B]
gi|419331540|ref|ZP_13873131.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12C]
gi|419336784|ref|ZP_13878296.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12D]
gi|419342409|ref|ZP_13883861.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12E]
gi|420393960|ref|ZP_14893204.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPEC C342-62]
gi|323161113|gb|EFZ47031.1| ATP-dependent DNA helicase RecQ [Escherichia coli E128010]
gi|378161445|gb|EHX22422.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12B]
gi|378164595|gb|EHX25537.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12A]
gi|378165464|gb|EHX26398.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12C]
gi|378179327|gb|EHX40057.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12D]
gi|378182541|gb|EHX43192.1| ATP-dependent DNA helicase RecQ [Escherichia coli DEC12E]
gi|391310039|gb|EIQ67702.1| ATP-dependent DNA helicase RecQ [Escherichia coli EPEC C342-62]
Length = 609
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 17 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 63
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 64 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 113 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 166
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 167 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 216
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 217 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAVAYHAGLENN 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 274 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 333
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 334 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|432545657|ref|ZP_19782479.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|432551136|ref|ZP_19787884.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|432624192|ref|ZP_19860204.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|432817612|ref|ZP_20051362.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
gi|431070550|gb|ELD78853.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE236]
gi|431075989|gb|ELD83505.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE237]
gi|431155723|gb|ELE56469.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE76]
gi|431360028|gb|ELG46649.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE115]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|300917877|ref|ZP_07134511.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|432531614|ref|ZP_19768636.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
gi|300414922|gb|EFJ98232.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 115-1]
gi|431066937|gb|ELD75555.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE234]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRTKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|301025732|ref|ZP_07189247.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|419918818|ref|ZP_14436995.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
gi|300395855|gb|EFJ79393.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 69-1]
gi|388389458|gb|EIL50989.1| ATP-dependent DNA helicase RecQ [Escherichia coli KD2]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|218262311|ref|ZP_03476825.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
gi|218223462|gb|EEC96112.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
Length = 729
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 206/393 (52%), Gaps = 53/393 (13%)
Query: 36 LTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPG 95
LT +LK FGFD+FK ++AI +L +D FV MPTG G + + + G
Sbjct: 10 LTEELKKHFGFDTFKG--NQRAIIENVLAGNDTFVLMPTGG----GKSLCYQLPSLMMQG 63
Query: 96 ADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAIL 155
+ ISP+++ + V + + + + + NK+ +
Sbjct: 64 TAIV-----------ISPLIALM--------KNQVDAMRNFSEEDGVAHFINSSLNKSAI 104
Query: 156 EELR--LVKPRIKLLYVTPERAV-TESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFR 212
++++ + R KLLYV PE E+ +L R +++ VDEAHC+SEWGHDFR
Sbjct: 105 DQVKDDIRSGRTKLLYVAPESLTKDENVEFL-----RQVNISFYAVDEAHCISEWGHDFR 159
Query: 213 PTYRRLGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDV 272
P YRR+ + G P+IALTATA P V+ DI L VFK+S RSNL+Y++
Sbjct: 160 PEYRRIRPIINEIGKR-PLIALTATATPKVQHDIQKNLGMIDA-SVFKSSFNRSNLYYEI 217
Query: 273 IFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK--------- 323
+ A++ I K + K N+ + GIIYC +R+ + AD L+
Sbjct: 218 ------RPKTANIDREIIKYI-KSNEGKS-GIIYCLSRKKVEEFADILKANGIKALPYHA 269
Query: 324 -VNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAG 382
++ +RS Q++F+ + +VI ATI+FGMGID+ +VR+V+H+ +P S+ YYQE+GRAG
Sbjct: 270 GMDSQQRSSNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 329
Query: 383 RDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
RDG + C +++ + LE ++ ++E
Sbjct: 330 RDGGEGQCIAFYAYKDLQKLEKFMQGKPVAEQE 362
>gi|149371063|ref|ZP_01890658.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149355849|gb|EDM44407.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 697
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 197/368 (53%), Gaps = 57/368 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
LK FG+DSF+ ++ I + +L D+ MPTG G + ++P A
Sbjct: 13 LKTHFGYDSFRP--NQEEIINTVLEAKDVLAIMPTGG----GKSLC----FQLPALA--- 59
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSI-VTGRSDLYQLELIVSGQTKTENKAILEEL 158
LNG ISP+++ +D ++ G S Y S Q + E AILE
Sbjct: 60 LNGTAIV----ISPLIA----LMKDQVDALNANGISAAY----YNSTQPQEEQAAILE-- 105
Query: 159 RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRL 218
+L+ ++KL+YV PE S L HL + ++ I VDEAHC+S WGHDFRP Y +L
Sbjct: 106 KLITRQLKLIYVAPE-----SIWSLTNHLSKI-EINLIAVDEAHCISSWGHDFRPAYTQL 159
Query: 219 GELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L+Q F G PIIALTATA+ + + DI+ LK + K F +S R N++ DV
Sbjct: 160 SRLKQEFPGT--PIIALTATADRATQDDILDQLKISNA-KRFVSSFDRPNIYLDVRPG-- 214
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
++ H+ +F+ ++ GIIYC +R+ T + L+ K ++
Sbjct: 215 -QNRINHIYKFL------SSRGLQSGIIYCLSRKSTESITAKLKTKGYDAAAYHAGLSAE 267
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
+RS++QE F+ +I ATI+FGMGID+ NVR+V+H+ MP +I YYQE GR GRDGL+
Sbjct: 268 DRSQIQEDFINDRTPIIVATIAFGMGIDKSNVRWVIHYNMPKNIEGYYQEIGRGGRDGLK 327
Query: 388 SYCRIYHS 395
+ +++S
Sbjct: 328 ARALMFYS 335
>gi|194429200|ref|ZP_03061728.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300923326|ref|ZP_07139374.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
gi|194412712|gb|EDX29006.1| ATP-dependent DNA helicase RecQ [Escherichia coli B171]
gi|300420412|gb|EFK03723.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 182-1]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAVAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
>gi|227114714|ref|ZP_03828370.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|403060389|ref|YP_006648606.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402807715|gb|AFR05353.1| ATP-dependent DNA helicase RecQ [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 608
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 209/414 (50%), Gaps = 53/414 (12%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ Q+ I L D V MPTG G + + + G +
Sbjct: 17 LRDTFGYQQFRPGQQE--IISATLSGQDCLVIMPTGG----GKSLCYQIPALVMDGLTLV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
+SP++S K + ++ + S QT+ + ++ R
Sbjct: 71 -----------VSPLISLM-------KDQVDQLQAYGVSAACLNSTQTREQQLEVMAGCR 112
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+IKLLY+ PER T+SF L HL + ++A I VDEAHC+S+WGHDFRP YR LG
Sbjct: 113 --TGQIKLLYIAPERLTTDSF---LDHLAHW-QIALIAVDEAHCISQWGHDFRPEYRALG 166
Query: 220 ELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDLL 278
+++Q + +P IALTATA+ + + DI+ +L P + + S+F R N+ Y ++
Sbjct: 167 QIKQRFPH-LPFIALTATADETTRNDIVRLLDLQSP--LIQISSFDRPNIRYTLV----- 218
Query: 279 KDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDL----------ADALRRKVNKHE 328
+ + + + G+ K+ GIIYC +R D+ A A ++
Sbjct: 219 -EKFKPLDQLWMFVQGQRGKS---GIIYCNSRSRVEDICARLQARGLSAGAYHAGLDNER 274
Query: 329 RSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQS 388
R++VQE+F+R ++ V+ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL +
Sbjct: 275 RAQVQEAFLRDDLQVVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLAA 334
Query: 389 YCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+++ L ++ + + +E N + + LV+L +
Sbjct: 335 EAALFYDPADMAWLRRCLEEKPAGPQLDIERHKLNAMGAFAEAQTCRRLVLLNY 388
>gi|158424466|ref|YP_001525758.1| ATP-dependent DNA helicase [Azorhizobium caulinodans ORS 571]
gi|158331355|dbj|BAF88840.1| ATP-dependent DNA helicase [Azorhizobium caulinodans ORS 571]
Length = 608
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 212/427 (49%), Gaps = 67/427 (15%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ +FG+DSF+ Q + + H++ D V MPTG + V A R PG +
Sbjct: 17 LRHVFGYDSFRGR-QAEIVDHVVA-GGDALVLMPTGGGKSLCYQVPALVR----PGTGIV 70
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEEL- 158
ISP+++ + D+ L QL + + T A ++
Sbjct: 71 -----------ISPLIALMH-----DQVQA------LRQLGVRAAALNSTLQPAEARQVE 108
Query: 159 -RLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRR 217
+L + LLYV PER +T+SF LLQ ++A +DEAHCVS+WGHDFRP YR+
Sbjct: 109 RQLAMGELDLLYVAPERLLTDSFLTLLQG----ARIALFAIDEAHCVSQWGHDFRPEYRQ 164
Query: 218 LGELRQFTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTFRSNLFYDVIFDDL 277
L L + S+P IALTATA+ +++I+ L +VF +S R N+ Y +
Sbjct: 165 LTLLHERF-PSVPRIALTATADGPTRREIVERLGLEN-GRVFLSSFDRPNIRYRIAPK-- 220
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADAL----------RRKVNKH 327
+ A ++ F+ D+ G+IYC +R A AL ++
Sbjct: 221 -ANPKAQLRAFL------DDHEGEAGVIYCMSRAKVEQTAQALVDEGRFALPYHAGLDAE 273
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+R Q+ F++ E ++ ATI+FGMGID+ +VRFVVH +P SI AYYQE+GRAGRDGL
Sbjct: 274 TRARHQDRFLKEEGVIMVATIAFGMGIDKPDVRFVVHLDLPKSIEAYYQETGRAGRDGLP 333
Query: 388 SYC-RIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQG---------YFL 437
S +Y E K +++V +D R+++E + + ++L CE YF
Sbjct: 334 SEALLLYGVEDVAKLIQFVEASDAPDARKRVERQKLD--ALLGLCETASCRRQVLLSYFE 391
Query: 438 VILVFPC 444
L PC
Sbjct: 392 ETLDEPC 398
>gi|445053267|ref|ZP_21368273.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
gi|444659629|gb|ELW32037.1| ATP-dependent DNA helicase RecQ [Escherichia coli 95.0083]
Length = 603
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 11 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 57
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 58 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 106
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 107 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 160
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 161 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 210
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 211 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 267
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 268 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 327
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 328 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 382
>gi|261880042|ref|ZP_06006469.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
gi|270333282|gb|EFA44068.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
Length = 742
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 133/404 (32%), Positives = 199/404 (49%), Gaps = 57/404 (14%)
Query: 31 VSEQELTAKLKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGA----VSLVGSVVSA 86
+ E LT +LK FGFDSFK + ++AI L+ D FV MPTG + S++
Sbjct: 2 MKEDNLTLRLKQYFGFDSFKGD--QEAIIKSLMGGSDAFVLMPTGGGKSLCYQLPSLLMD 59
Query: 87 RSRVRIPPGADFILNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQ 146
+ + I P + N V NG + +L +K +I D++ SG+
Sbjct: 60 GTAIVISPLIALMKN-QVDVVNGLTEESGVAHFLNSSLNKQAITQVEEDVH------SGK 112
Query: 147 TKTENKAILEELRLVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSE 206
TK LLYV PE Q ++++ +DEAHC+SE
Sbjct: 113 TK------------------LLYVAPESLNKPDNLEFFQSF----RISFYAIDEAHCISE 150
Query: 207 WGHDFRPTYRRLGELRQFTGNS-----IPIIALTATAEPSVKQDIISVLKFNKPYKVFKT 261
WGHDFRP YR + +S PIIALTATA V+ DI L + FK+
Sbjct: 151 WGHDFRPEYRNIRPTIDKIASSRGEKRAPIIALTATATDKVRSDIKKSLGIVDA-RDFKS 209
Query: 262 STFRSNLFYDVIFDDLLKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALR 321
S R NL+Y+V +D+ + + F+++ GK GIIYC +R+ +L+ L+
Sbjct: 210 SFNRPNLYYEVRQKASEEDADSQIIRFLKQHEGK------SGIIYCLSRKKVEELSKKLQ 263
Query: 322 ----------RKVNKHERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSI 371
++ R++ Q+ F+R +I++I ATI+FGMGID+ +VRFV+H+ +P S+
Sbjct: 264 INGYKAAPYHAGLDTEVRTQTQDDFLREDIDIIVATIAFGMGIDKPDVRFVIHYDIPKSL 323
Query: 372 PAYYQESGRAGRDGLQSYCRIYHSEHSKKSLEYVIKTDTSTKRE 415
YYQE+GRAGRDG + C ++S K LE ++E
Sbjct: 324 EGYYQETGRAGRDGGEGRCIAFYSPKDLKKLEKFTDNKGEAEKE 367
>gi|82546173|ref|YP_410120.1| ATP-dependent DNA helicase RecQ [Shigella boydii Sb227]
gi|416295404|ref|ZP_11651155.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
gi|81247584|gb|ABB68292.1| ATP-dependent DNA helicase [Shigella boydii Sb227]
gi|320186210|gb|EFW60949.1| ATP-dependent DNA helicase RecQ [Shigella flexneri CDC 796-83]
Length = 611
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/415 (30%), Positives = 212/415 (51%), Gaps = 55/415 (13%)
Query: 40 LKALFGFDSFKCELQKKAIRHILLRTHDIFVSMPTGAVSLVGSVVSARSRVRIPPGADFI 99
L+ FG+ F+ ++ I +L D V MPTG + + A +
Sbjct: 19 LQETFGYQQFRPG--QEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPA-----------LL 65
Query: 100 LNGNVRSRNGWISPILSSFYLRFRDDKTSIVTGRSDLYQLELIVSGQTKTENKAILEELR 159
LNG +SP++S K + +++ + S QT+ + ++ R
Sbjct: 66 LNGLTVV----VSPLISLM-------KDQVDQLQANGVAAACLNSTQTREQQLEVMTGCR 114
Query: 160 LVKPRIKLLYVTPERAVTESFHYLLQHLVRYNKLAYIVVDEAHCVSEWGHDFRPTYRRLG 219
+I+LLY+ PER + ++F L+HL +N + + VDEAHC+S+WGHDFRP Y LG
Sbjct: 115 --TGQIRLLYIAPERLMLDNF---LEHLAHWNPV-LLAVDEAHCISQWGHDFRPEYAALG 168
Query: 220 ELRQ-FTGNSIPIIALTATAEPSVKQDIISVLKFNKPYKVFKTSTF-RSNLFYDVIFDDL 277
+LRQ F ++P +ALTATA+ + +QDI+ +L N P + + S+F R N+ Y +
Sbjct: 169 QLRQRFP--TLPFMALTATADDTTRQDIVRLLGLNDP--LIQISSFDRPNIRY------M 218
Query: 278 LKDSYAHVKEFIEKCLGKDNKANNCGIIYCRTREHTTDLADALRRK----------VNKH 327
L + + + + + + K+ GIIYC +R D A L+ K + +
Sbjct: 219 LMEKFKPLDQLMRYVQEQRGKS---GIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENN 275
Query: 328 ERSRVQESFMRGEINVITATISFGMGIDRQNVRFVVHWGMPSSIPAYYQESGRAGRDGLQ 387
R+ VQE F R ++ ++ AT++FGMGI++ NVRFVVH+ +P +I +YYQE+GRAGRDGL
Sbjct: 276 VRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLP 335
Query: 388 SYCRIYHSEHSKKSLEYVIKTDTSTKREQLELKFKNYLSMLEYCEQGYFLVILVF 442
+ +++ L ++ + + +E N + + LV+L +
Sbjct: 336 AEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNY 390
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,653,014,549
Number of Sequences: 23463169
Number of extensions: 275534696
Number of successful extensions: 731432
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18403
Number of HSP's successfully gapped in prelim test: 7446
Number of HSP's that attempted gapping in prelim test: 687232
Number of HSP's gapped (non-prelim): 29905
length of query: 444
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 298
effective length of database: 8,933,572,693
effective search space: 2662204662514
effective search space used: 2662204662514
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)