BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy796
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 214 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 266 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 294
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 41 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 98 RLEGVVTKSKPVMIVTEY 115
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 197 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 277
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 24 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 81 RLEGVVTKSKPVMIVTEY 98
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+VWSF V +WE+L+ ++P+ ++TN VI + E Y LP P CP
Sbjct: 231 FSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHA 282
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
++ LM DCW +D+ RP F QI S +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+VWSF V +WE+L+ ++P+ ++TN VI + E Y LP P CP
Sbjct: 231 FSSASDVWSFGVVMWEVLAYG-ERPYWNMTNRDVISSVEEGYR-------LPAPMGCPHA 282
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
++ LM DCW +D+ RP F QI S +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 226 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 306
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 53 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 110 RLEGVVTKSKPVMIVTEY 127
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + LWE++S ++P+ ++N+ VI+ + Y LP P CP
Sbjct: 224 KFTSASDVWSYGIVLWEVMSYG-ERPYWEMSNQDVIKAVDEGYR-------LPPPMDCPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++D+ RP F+QI S + +
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQIVSILDK 304
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 39 LGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIRFLSSLQDPNLV 87
+G+ GE +C ++L ++K VA++T R D L E + PN++
Sbjct: 51 VGAGEFGE--VCSGR-LKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 88 SILGVCTGEQPPWLVMEY 105
+ GV T +P +V EY
Sbjct: 108 RLEGVVTKSKPVMIVTEY 125
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 82/263 (31%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREI 75
E D IPR L++ ++LG+ GE+ + KVAV+T + S L E
Sbjct: 173 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNK----HTKVAVKTMKPGSMSVEAFLAEA 228
Query: 76 RFLSSLQDPNLVSILGVCTGE-------------------------QPPWLVMEYPAQLG 110
+ +LQ LV + V T E QP ++++ AQ+
Sbjct: 229 NVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIA 288
Query: 111 DLVQHLNSADNLTRDR---------------------------------------DRYTC 131
+ + + + + RD +T
Sbjct: 289 EGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTI 348
Query: 132 QSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD 191
+S+VWSF + L EI++ R P+P ++N +VI+ E Y +P+P CP ++Y+
Sbjct: 349 KSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEELYN 400
Query: 192 LMCDCWKRDQTMRPTFKQIYSFM 214
+M CWK RPTF+ I S +
Sbjct: 401 IMMRCWKNRPEERPTFEYIQSVL 423
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ +TN+ VI+ E Y LP P CP
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYG-ERPYWEMTNQDVIKAVEEGYR-------LPSPMDCPA 254
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+Y LM DCW++++ RP F +I + + +
Sbjct: 255 ALYQLMLDCWQKERNSRPKFDEIVNMLDK 283
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK---VAVRTC--------RGDSLREIR 76
I C+ + +G+ GE +C ++L ++ VA++T R D L E
Sbjct: 19 IEASCITIERVIGAGEFGE--VCSGR-LKLPGKRELPVAIKTLKVGYTEKQRRDFLGEAS 75
Query: 77 FLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ PN++ + GV T +P +V EY
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEY 104
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 72
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 113
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 243 SLHDLMCQCWRKDPEERPTFEYLQAFLE 270
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 409
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 410 SLHDLMCQCWRKDPEERPTFEYLQAFLE 437
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 12/116 (10%)
Query: 9 NISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR 68
N+ P+ + D IPR LR+ +LG GE+ + T +VA++T +
Sbjct: 163 NVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWN----GTTRVAIKTLK 218
Query: 69 GDS------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ L+E + + L+ LV + V + E+P ++V EY ++ G L+ L
Sbjct: 219 PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSK-GSLLDFLKG 272
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 206 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 257
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 258 VTDLMRMCWQFNPKMRPTFLEIVNLLK 284
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 69
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 70 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 110
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 234 SLHDLMCQCWRKDPEERPTFEYLQAFLE 261
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 208 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 260 VTDLMRMCWQFNPKMRPTFLEIVNLLK 286
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 71
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 112
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW++D RPTF+ + +F++
Sbjct: 232 SLHDLMCQCWRKDPEERPTFEYLQAFLE 259
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 210 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 262 VTDLMRMCWQFNPNMRPTFLEIVNLLK 288
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 73
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 114
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 72
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 113
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 72
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 113
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ ++N+ VI+ E Y LP P CP
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPAPMDCPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW++++ RP F+QI + +
Sbjct: 276 GLHQLMLDCWQKERAERPKFEQIVGILDK 304
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 72
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 113
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+ WS+ + +WE++S ++P+ ++N+ VI E Y LP P CP
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPT 250
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
++ LM DCW++D+ RP F Q+ S + + ++L +
Sbjct: 251 SLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 289
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S++WSF V LWEI SL ++P+ L+NEQV++ + GG +L +P CP
Sbjct: 209 FTTSSDMWSFGVVLWEITSLA-EQPYQGLSNEQVLK---FVMDGG----YLDQPDNCPER 260
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ DLM CW+ + MRPTF +I + +K
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLLK 287
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDI---ELDTEKVAVRTC-RGDSLRE-IRFLSSLQ 82
+ R + +L LG G + DI E +T +VAV+T SLRE I FL+
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAET-RVAVKTVNESASLRERIEFLNEAS 72
Query: 83 D------PNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V +LGV + QP +VME A GDL +L S
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH-GDLKSYLRS 113
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ +TN+ VI E Y LP P CP
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPS 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW++D+ RP F QI + + +
Sbjct: 242 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ +TN+ VI E Y LP P CP
Sbjct: 216 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMTNQDVINAIEQDYR-------LPPPMDCPS 267
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW++D+ RP F QI + + +
Sbjct: 268 ALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+ WS+ + +WE++S ++P+ ++N+ VI E Y LP P CP
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFG-ERPYWDMSNQDVINAIEQDYR-------LPPPPDCPT 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
++ LM DCW++D+ RP F Q+ S + + ++L +
Sbjct: 249 SLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNPASLKI 287
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 491
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 492 SLHDLMCQCWRKEPEERPTFEYLQAFLE 519
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF + LWE SL P+P+L+N+Q + E GG L P P LCP
Sbjct: 291 RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVEK---GGRL----PCPELCPD 342
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
++ LM CW + RP+F IY
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIY 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVS 88
E++G + GE+ + + D VAV++CR L+E R L PN+V
Sbjct: 120 EQIGRGNFGEVF---SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++GVCT +QP ++VME Q GD + L +
Sbjct: 177 LIGVCTQKQPIYIVMEL-VQGGDFLTFLRT 205
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF + LWE SL P+P+L+N+Q + E GG L P P LCP
Sbjct: 291 RYSSESDVWSFGILLWETFSLGAS-PYPNLSNQQTREFVEK---GGRL----PCPELCPD 342
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIY 211
++ LM CW + RP+F IY
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIY 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 37 ERLGSCHLGEMMICETEDIELDTEKVAVRTCR--------GDSLREIRFLSSLQDPNLVS 88
E++G + GE+ + + D VAV++CR L+E R L PN+V
Sbjct: 120 EQIGRGNFGEVF---SGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++GVCT +QP ++VME Q GD + L +
Sbjct: 177 LIGVCTQKQPIYIVMEL-VQGGDFLTFLRT 205
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 181 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 233 SLHDLMCQCWRKEPEERPTFEYLQAFLE 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 240 SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 235
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 236 SLHDLMCQCWRKEPEERPTFEYLQAFLE 263
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 262
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 263 LFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 240 SLHDLMCQCWRKEPEERPTFEYLQAFLE 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 262 LFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+ + R P+P + N +V+ E Y +P P CP
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGR-VPYPGMVNREVLDQVERGYR-------MPCPPECPE 408
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++DLMC CW+++ RPTF+ + +F++
Sbjct: 409 SLHDLMCQCWRKEPEERPTFEYLQAFLE 436
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 255
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 256 LFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 208 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 260 LFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 207 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 258
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 259 LFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 211 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 262
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 263 LFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 210 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 261
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 262 LFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF + L E+++ R P+P + N +V++ E Y +P P CP
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGR-VPYPGMNNREVLEQVERGYR-------MPCPQDCPI 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CWK+D RPTF+ + SF++
Sbjct: 234 SLHELMIHCWKKDPEERPTFEYLQSFLE 261
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
DV IPR L++++RLG+ GE+ + KVA++T + + L E +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWN----GNTKVAIKTLKPGTMSPESFLEEAQI 57
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
+ L+ LV + V + E+P ++V EY + G L+ L +
Sbjct: 58 MKKLKHDKLVQLYAVVS-EEPIYIVTEYMNK-GSLLDFLKDGEG 99
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 239 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 290
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 291 LFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 268
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 269 LFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 237 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 288
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
+IY +M CW + T RPTF+QI SF++
Sbjct: 289 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 319
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 23/129 (17%)
Query: 8 WNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELDTE 60
W I S G SY + +P PR L+ + LG+ G+ + E L E
Sbjct: 1 WKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLGKE 58
Query: 61 ----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPA 107
KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 59 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 108 QLGDLVQHL 116
GDL+ L
Sbjct: 119 -YGDLLNFL 126
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 217 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 268
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+++LM CW+ + MRP+F +I S +K
Sbjct: 269 LFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 294
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+IY +M CW + T RPTF+QI SF++
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQ 322
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELD 58
V+W I S G SY + +P PR L+ + LG+ G+ + E L
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLG 71
Query: 59 TE----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY 105
E KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 106 PAQLGDLVQHL 116
GDL+ L
Sbjct: 132 CC-YGDLLNFL 141
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 239 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 290
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
+IY +M CW + T RPTF+QI SF++
Sbjct: 291 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 321
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELD 58
V+W I S G SY + +P PR L+ + LG+ G+ + E L
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLG 71
Query: 59 TE----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY 105
E KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 106 PAQLGDLVQHLNSADNLTRDRD 127
GDL+ L D++
Sbjct: 132 CC-YGDLLNFLRRKAEADLDKE 152
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 231 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 282
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
+IY +M CW + T RPTF+QI SF++
Sbjct: 283 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 313
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 23/142 (16%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELD 58
V+W I S G SY + +P PR L+ + LG+ G+ + E L
Sbjct: 6 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLG 63
Query: 59 TE----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY 105
E KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 64 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
Query: 106 PAQLGDLVQHLNSADNLTRDRD 127
GDL+ L D++
Sbjct: 124 CC-YGDLLNFLRRKAEADLDKE 144
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 9/88 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 243 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 294
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+IY +M CW + T RPTF+QI SF++
Sbjct: 295 NIYSIMQACWALEPTHRPTFQQICSFLQ 322
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELD 58
V+W I S G SY + +P PR L+ + LG+ G+ + E L
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLG 71
Query: 59 TE----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY 105
E KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 106 PAQLGDLVQHL 116
GDL+ L
Sbjct: 132 CC-YGDLLNFL 141
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ ++N+ VI+ E Y LP P CP
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 246
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW+++++ RP F QI + + +
Sbjct: 247 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 275
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK---VAVRTCRG--------DSLREIR 76
I C+++ + +G GE +C +++ ++ VA++T + D L E
Sbjct: 11 IDASCIKIEKVIGVGEFGE--VCSGR-LKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 67
Query: 77 FLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ PN++ + GV T +P ++ EY
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEY 96
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH-LTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
YT QS+VWS+ + LWEI SL + P+P L N + + + Y + +P+ P+
Sbjct: 245 YTVQSDVWSYGILLWEIFSLGLN-PYPGILVNSKFYKLVKDGYQ-------MAQPAFAPK 296
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRST 218
+IY +M CW + T RPTF+QI SF++
Sbjct: 297 NIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETEDIELD 58
V+W I S G SY + +P PR L+ + LG+ G+ + E L
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGK--VVEATAFGLG 71
Query: 59 TE----KVAVRTCRGDS--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEY 105
E KVAV+ + + + E++ +S L Q N+V++LG CT P ++ EY
Sbjct: 72 KEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
Query: 106 PAQLGDLVQHL 116
GDL+ L
Sbjct: 132 CC-YGDLLNFL 141
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ ++N+ VI+ E Y LP P CP
Sbjct: 210 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 261
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW+++++ RP F QI + + +
Sbjct: 262 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 290
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK---VAVRTCRG--------DSLREIR 76
I C+++ + +G GE +C +++ ++ VA++T + D L E
Sbjct: 26 IDASCIKIEKVIGVGEFGE--VCSGR-LKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 82
Query: 77 FLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ PN++ + GV T +P ++ EY
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCKPVMIITEY 111
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWS+ + +WE++S ++P+ ++N+ VI+ E Y LP P CP
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYG-ERPYWDMSNQDVIKAIEEGYR-------LPPPMDCPI 240
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++ LM DCW+++++ RP F QI + + +
Sbjct: 241 ALHQLMLDCWQKERSDRPKFGQIVNMLDK 269
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK---VAVRTCRG--------DSLREIR 76
I C+++ + +G GE +C +++ ++ VA++T + D L E
Sbjct: 5 IDASCIKIEKVIGVGEFGE--VCSGR-LKVPGKREICVAIKTLKAGYTDKQRRDFLSEAS 61
Query: 77 FLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ PN++ + GV T +P ++ EY
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEY 90
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 202 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ +LM CW+ + MRP+F +I S +K
Sbjct: 254 LLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P ++N +VI+ E Y +P+P CP +
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR-IPYPGMSNPEVIRALERGYR-------MPRPENCPEE 413
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+Y++M CWK RPTF+ I S +
Sbjct: 414 LYNIMMRCWKNRPEERPTFEYIQSVL 439
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREI 75
E D IPR L++ ++LG+ GE+ + KVAV+T + S L E
Sbjct: 179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEA 234
Query: 76 RFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ +LQ LV + V T E P +++ E+ A+ G L+ L S
Sbjct: 235 NVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAK-GSLLDFLKS 275
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWEI + + +P+ L+N +VI+ G + L +P +CP+
Sbjct: 211 KFTTESDVWSFGVILWEIFTYGK-QPWFQLSNTEVIECITQ----GRV---LERPRVCPK 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFM 214
++YD+M CW+R+ R K+IY +
Sbjct: 263 EVYDVMLGCWQREPQQRLNIKEIYKIL 289
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 35 VLER-LGSCHLGEMMICETEDIELDTEK--VAVRT-------CRGDSLREIRFLSSLQDP 84
VL+R LG G++ + E ++ +K VAV+ R D RE L++LQ
Sbjct: 18 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE 77
Query: 85 NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
++V GVC P +V EY GDL + L +
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKH-GDLNKFLRA 110
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P ++N +VI+ E Y +P+P CP +
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRI-PYPGMSNPEVIRALERGYR-------MPRPENCPEE 240
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+Y++M CWK RPTF+ I S +
Sbjct: 241 LYNIMMRCWKNRPEERPTFEYIQSVL 266
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREI 75
E D IPR L++ ++LG+ GE+ + KVAV+T + S L E
Sbjct: 6 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYN----KHTKVAVKTMKPGSMSVEAFLAEA 61
Query: 76 RFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ +LQ LV + V T E P +++ E+ A+ G L+ L S
Sbjct: 62 NVMKTLQHDKLVKLHAVVTKE-PIYIITEFMAK-GSLLDFLKS 102
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 53/87 (60%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T S+VWSF V LWEI +L ++P+ L+NEQV++ + GG L KP CP
Sbjct: 204 FTTYSDVWSFGVVLWEIATLA-EQPYQGLSNEQVLR---FVMEGG----LLDKPDNCPDM 255
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+ +LM CW+ + MRP+F +I S +K
Sbjct: 256 LLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T S+VWSF + +WE+++ ++P+ L+N +V++ + LP P CP
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYG-ERPYWELSNHEVMKAINDGFR-------LPTPMDCPS 277
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
IY LM CW++++ RP F I S + +
Sbjct: 278 AIYQLMMQCWQQERARRPKFADIVSILDK 306
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 127
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 270 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 321
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLDL 226
+Y +M DCW + RPTFKQ+ + R SN ++
Sbjct: 322 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEM 359
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 168
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 221 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 272
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 273 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 307
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 17 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 76
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 77 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 119
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 127
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 127
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 222 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 274 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 18 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 77
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 120
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 229 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 281 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 84
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 127
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 218 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 269
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 270 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 304
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 15 GQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGD 70
G Y+ E +PR L + + LG G++++ E ++ D KVAV+ + D
Sbjct: 1 GSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 60
Query: 71 S--------LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + E+ + + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 61 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 116
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW FAV +WEILS + +PF L N+ VI E G+ LPKP LCP
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 253
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 254 VLYTLMTRCWDYDPSDRPRFTEL 276
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWS V LWEI + + +P+ L+N +VI E + G LQ +P CP+
Sbjct: 206 KFTTESDVWSLGVVLWEIFTYGK-QPWYQLSNNEVI---ECITQGRVLQ----RPRTCPQ 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y+LM CW+R+ MR K I++ ++
Sbjct: 258 EVYELMLGCWQREPHMRKNIKGIHTLLQ 285
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 25 VVPIPRYCLRVLERLGSCHLGEMMICETEDI--ELDTEKVAVRT-------CRGDSLREI 75
V I R+ + + LG G++ + E ++ E D VAV+T R D RE
Sbjct: 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 76 RFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
L++LQ ++V GVC P +V EY GDL + L +
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKH-GDLNKFLRA 108
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI +L P+P + E++ + + + + KPS C +
Sbjct: 214 YTHQSDVWSFGVLLWEIFTLG-GSPYPGVPVEELFKLLKEGHR-------MDKPSNCTNE 265
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R SN
Sbjct: 266 LYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 300
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD----TEKVAVRTCRGDS--------LREI 75
+PR L + + LG G++++ E ++ D KVAV+ + D+ + E+
Sbjct: 10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 69
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLQA 112
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW FAV +WEILS + +PF L N+ VI E G+ LPKP LCP
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTEL 264
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 234
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 235 LYQLMRLCWKERPEDRPTFDYLRSVLE 261
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 6 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 61
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 62 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 100
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 233
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 234 LYQLMRLCWKERPEDRPTFDYLRSVLE 260
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 5 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 60
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 61 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 99
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW FAV +WEILS + +PF L N+ VI E G+ LPKP LCP
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGK-QPFFWLENKDVIGVLEK----GDR---LPKPDLCPP 237
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 238 VLYTLMTRCWDYDPSDRPRFTEL 260
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 12/105 (11%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D +PR L+++ERLG+ GE+ + KVAV++ + S L E
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANL 61
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
+ LQ LV + V T ++P +++ EY + G LV L + +
Sbjct: 62 MKQLQHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 104
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 246
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 247 LYQLMRLCWKERPEDRPTFDYLRSVLE 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 18 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 73
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 74 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 112
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 66 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 104
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 248 LYQLMRLCWKERPEDRPTFDYLRSVLE 274
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 19 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 74
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 75 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 113
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 245 LYQLMRLCWKERPEDRPTFDYLRSVLE 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 72 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 110
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 240
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 241 LYQLMRLCWKERPEDRPTFDYLRSVLE 267
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 12 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 67
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 68 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 106
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF + LWEI S R P+P + + V+ E Y + P CP
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y++M +CW D MRP+F Q+
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQL 264
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQDPNLV 87
L++L+ +G G++M+ + KVAV+ + D+ L E ++ L+ NLV
Sbjct: 23 LKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 77
Query: 88 SILGVCTGEQPP-WLVMEYPAQLGDLVQHLNS 118
+LGV E+ ++V EY A+ G LV +L S
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAK-GSLVDYLRS 108
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 66 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 104
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 244 LYQLMRLCWKERPEDRPTFDYLRSVLE 270
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 15 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 70
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 71 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 109
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 249 LYQLMRLCWKERPEDRPTFDYLRSVLE 275
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 20 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 75
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 76 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 114
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 239
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 240 LYQLMRLCWKERPEDRPTFDYLRSVLE 266
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 11 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 66
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 67 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 105
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF + LWEI S R P+P + + V+ E Y + P CP
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 413
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+YD+M +CW D RPTF Q+
Sbjct: 414 AVYDVMKNCWHLDAATRPTFLQL 436
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQDPNLV 87
L++L+ +G G++M+ + KVAV+ + D+ L E ++ L+ NLV
Sbjct: 195 LKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 249
Query: 88 SILGVCTGEQPP-WLVMEYPAQLGDLVQHLNS 118
+LGV E+ ++V EY A+ G LV +L S
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAK-GSLVDYLRS 280
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 245 LYQLMRLCWKERPEDRPTFDYLRSVLE 271
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 16 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 71
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 72 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 110
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L EI++ R P+P +TN +VIQN E Y + +P CP +
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLERGYR-------MVRPDNCPEE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMK 215
+Y LM CWK RPTF + S ++
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLE 265
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+PR L+++ERLG+ GE+ + KVAV++ + S L E + L
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYN----GHTKVAVKSLKQGSMSPDAFLAEANLMKQL 65
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
Q LV + V T ++P +++ EY + G LV L + +
Sbjct: 66 QHQRLVRLYAVVT-QEPIYIITEY-MENGSLVDFLKTPSGI 104
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
++ S+VWSF VTL+E+L+ C PH ++I + + G++ V
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ-----GQMTVLRLTELLERG 245
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
LP+P CP +IY LM +CW+ + + RPTF+ + ++ +
Sbjct: 246 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTA 286
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
++ S+VWSF VTL+E+L+ C PH ++I + + G++ V
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQ-----GQMTVLRLTELLERG 244
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRS 217
LP+P CP +IY LM +CW+ + + RPTF+ + ++ +
Sbjct: 245 ERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTA 285
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF + LWEI S R P+P + + V+ E Y + P CP
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPP 226
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y++M +CW D MRP+F Q+
Sbjct: 227 AVYEVMKNCWHLDAAMRPSFLQL 249
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQDPNLV 87
L++L+ +G G++M+ + KVAV+ + D+ L E ++ L+ NLV
Sbjct: 8 LKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 62
Query: 88 SILGVCTGEQPP-WLVMEYPAQLGDLVQHLNS 118
+LGV E+ ++V EY A+ G LV +L S
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAK-GSLVDYLRS 93
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ +S+VWSF + LWEI S R P+P + + V+ E Y + P CP
Sbjct: 182 FSTKSDVWSFGILLWEIYSFGR-VPYPRIPLKDVVPRVEKGYK-------MDAPDGCPPA 233
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y++M +CW D MRP+F Q+
Sbjct: 234 VYEVMKNCWHLDAAMRPSFLQL 255
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS-----LREIRFLSSLQDPNLV 87
L++L+ +G G++M+ + KVAV+ + D+ L E ++ L+ NLV
Sbjct: 14 LKLLQTIGKGEFGDVMLGDYRG-----NKVAVKCIKNDATAQAFLAEASVMTQLRHSNLV 68
Query: 88 SILGVCTGEQPP-WLVMEYPAQLGDLVQHLNS 118
+LGV E+ ++V EY A+ G LV +L S
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAK-GSLVDYLRS 99
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++ Y A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVGY-ASKGNLREYLRA 134
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIITLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++ +LG CT + P ++++EY A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIIHLLGACTQDGPLYVIVEY-ASKGNLREYLRA 134
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 228 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 280 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 314
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 24 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 83
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 84 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 126
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 287
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 288 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 91
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++ Y A G+L ++L +
Sbjct: 92 EMMKMIGKHKNIINLLGACTQDGPLYVIVAY-ASKGNLREYLRA 134
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 333
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 334 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 137
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 138 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 180
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 225 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 276
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 277 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 311
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 21 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 80
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 81 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 123
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V +WEI +L P+P + E++ + + + + KP+ C +
Sbjct: 223 YTHQSDVWSFGVLMWEIFTLG-GSPYPGIPVEELFKLLKEGHR-------MDKPANCTNE 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
+Y +M DCW + RPTFKQ+ + R +N
Sbjct: 275 LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 309
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEK----VAVRTCRGDS--------LREI 75
PR L + + LG G++++ E I+ D K VAV+ + D+ + E+
Sbjct: 19 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEM 78
Query: 76 RFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ + + N++++LG CT + P ++++EY A G+L ++L +
Sbjct: 79 EMMKMIGKHKNIINLLGACTQDGPLYVIVEY-ASKGNLREYLRA 121
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+YT QS+VWS+ VT+WE+++ + P+ L +V E GE L +P +C
Sbjct: 193 KYTHQSDVWSYGVTVWELMTFGAE-PYAGLRLAEVPDLLEK----GER---LAQPQICTI 244
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
D+Y +M CW D+ +RPTFK++ + R
Sbjct: 245 DVYMVMVKCWMIDENIRPTFKELANEFTR 273
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+YT QS+VWS+ VT+WE+++ + P+ L +V E GE L +P +C
Sbjct: 211 KYTHQSDVWSYGVTVWELMTFGAE-PYAGLRLAEVPDLLEK----GER---LAQPQICTI 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
D+Y +M CW D+ +RPTFK++ + R
Sbjct: 263 DVYMVMVKCWMIDENIRPTFKELANEFTR 291
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLC 185
R R+T QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGA-KPYDGIPAREIPDLLEK----GER---LPQPPIC 246
Query: 186 PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
D+Y +M CW D RP F+++ S R
Sbjct: 247 TIDVYMIMVKCWMIDSECRPRFRELVSEFSR 277
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
++ S+VWSF VTL+E+L+ C P ++I A+ G++ V
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 267
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
LP+P CP ++Y LM +CW+ + + RPTF+ + +K
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +SNVWSF + L+EI++ + P+P TN V+ Y +P+ CP +
Sbjct: 187 FTIKSNVWSFGILLYEIVTYGK-IPYPGRTNADVMSALSQGYR-------MPRMENCPDE 238
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+YD+M CWK RPTF + S +
Sbjct: 239 LYDIMKMCWKEKAEERPTFDYLQSVL 264
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
IPR ++++++LG+ GE+ + ++ KVAV+T + + L E + +L
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYN----NSTKVAVKTLKPGTMSVQAFLEEANLMKTL 64
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
Q LV + V T E+P +++ E+ A+ G L+ L S
Sbjct: 65 QHDKLVRLYAVVTKEEPIYIITEFMAK-GSLLDFLKS 100
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 193 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 244
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 245 TLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 191 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 242
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 243 TLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 216 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 267
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 268 TLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 190 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 242 TLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 568 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 619
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 620 TLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 568 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 619
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 620 TLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 185 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 236
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 237 TLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T S+VW F V +WEIL + KPF + N VI E+ GE LP P CP
Sbjct: 188 RFTSASDVWMFGVCMWEIL-MHGVKPFQGVKNNDVIGRIEN----GER---LPMPPNCPP 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CW D + RP F ++
Sbjct: 240 TLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFG-GKPYDGIPTREIPDLLEK----GER---LPQPPICTI 269
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
D+Y +M CW D RP FK++ + R
Sbjct: 270 DVYMVMVKCWMIDADSRPKFKELAAEFSR 298
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFG-GKPYDGIPTREIPDLLEK----GER---LPQPPICTI 246
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
D+Y +M CW D RP FK++ + R
Sbjct: 247 DVYMVMVKCWMIDADSRPKFKELAAEFSR 275
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
++ S+VWSF VTL+E+L+ C P ++I A+ G++ V
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 250
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
LP+P CP ++Y LM +CW+ + + RPTF+ + +K
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
YT +S+VWS+ + LWE+ SL P+P + + +Y + F + P P
Sbjct: 240 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 291
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
++YD+M CW D RPTFKQI +++ + +N
Sbjct: 292 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 327
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETED-IELDTE-KVAVR--------TCRGDSLREIRF 77
PR L + LG+ G+++ I+ D VAV+ T R + E++
Sbjct: 36 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 95
Query: 78 LSSLQDP-NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
LS L + N+V++LG CT P ++ EY GDL+ L R RD + C
Sbjct: 96 LSYLGNHMNIVNLLGACTIGGPTLVITEY-CCYGDLLNFLR------RKRDSFICS 144
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
++ S+VWSF VTL+E+L+ C P ++I A+ G++ V
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQ-----GQMTVLRLTELLERG 250
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
LP+P CP ++Y LM +CW+ + + RPTF+ + +K
Sbjct: 251 ERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILK 289
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLS 273
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 109
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 110 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 143
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 239
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 240 KVYTIMYSCWHEKADERPTFKILLS 264
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 42 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 100
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 101 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 134
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 248
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLS 273
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 109
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 110 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 143
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
+RYT +S+VW++ V LWEI S +P+ + +E+VI YY + + L P CP
Sbjct: 251 NRYTTESDVWAYGVVLWEIFSYGL-QPYYGMAHEEVI------YYVRDGNI-LACPENCP 302
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
++Y+LM CW + RP+F I+ ++R
Sbjct: 303 LELYNLMRLCWSKLPADRPSFCSIHRILQR 332
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 68 RGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ D RE ++ +PN+V +LGVC +P L+ EY A GDL + L S
Sbjct: 94 QADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMA-YGDLNEFLRS 143
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 228
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 229 KVYTIMYSCWHEKADERPTFKILLS 253
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 89
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 90 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 123
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
YT +S+VWS+ + LWE+ SL P+P + + +Y + F + P P
Sbjct: 242 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 293
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
++YD+M CW D RPTFKQI +++ + +N
Sbjct: 294 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 329
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETED-IEL 57
VQW + + G +Y + +P PR L + LG+ G+++ I+
Sbjct: 9 VQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 68
Query: 58 DTE-KVAVR--------TCRGDSLREIRFLSSLQDP-NLVSILGVCTGEQPPWLVMEYPA 107
D VAV+ T R + E++ LS L + N+V++LG CT P ++ EY
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY-C 127
Query: 108 QLGDLVQHLNSADNLTRDRDRYTCQ 132
GDL+ L R RD + C
Sbjct: 128 CYGDLLNFLR------RKRDSFICS 146
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 233 KVYTIMYSCWHEKADERPTFKILLS 257
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 35 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 93
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 94 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 127
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
YT +S+VWS+ + LWE+ SL P+P + + +Y + F + P P
Sbjct: 224 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 275
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
++YD+M CW D RPTFKQI +++ + +N
Sbjct: 276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 311
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETED-IELDTE-KVAVR--------TCRGDSLREIRF 77
PR L + LG+ G+++ I+ D VAV+ T R + E++
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79
Query: 78 LSSLQDP-NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
LS L + N+V++LG CT P ++ EY GDL+ L R RD + C
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEY-CCYGDLLNFLR------RKRDSFICS 128
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLS 258
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 94
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 95 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 128
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
YT +S+VWS+ + LWE+ SL P+P + + +Y + F + P P
Sbjct: 247 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 298
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
++YD+M CW D RPTFKQI +++ + +N
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETED-IEL 57
VQW + + G +Y + +P PR L + LG+ G+++ I+
Sbjct: 14 VQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 58 DTE-KVAVR--------TCRGDSLREIRFLSSLQDP-NLVSILGVCTGEQPPWLVMEYPA 107
D VAV+ T R + E++ LS L + N+V++LG CT P ++ EY
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY-C 132
Query: 108 QLGDLVQHLNSADNLTRDRDRYTCQ 132
GDL+ L R RD + C
Sbjct: 133 CYGDLLNFLR------RKRDSFICS 151
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S++W+F V +WEI SL + P+ TN + AEH+ G + L +P L
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGK-MPYERFTNSE---TAEHIAQG----LRLYRPHLASE 233
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y +M CW RPTFK + S
Sbjct: 234 KVYTIMYSCWHEKADERPTFKILLS 258
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 62 VAVRTCRGDSLREIRFLS------SLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQH 115
VA++ + S+ E F+ +L LV + GVCT ++P +++ EY A G L+ +
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN-GCLLNY 94
Query: 116 LNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRD--KPFPHLTNEQVIQ 164
L R R+ Q ++L +C+D + +L ++Q +
Sbjct: 95 LREM------RHRFQTQ-----------QLLEMCKDVCEAMEYLESKQFLH 128
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF-LPKPSLCPR 187
YT +S+VWS+ + LWE+ SL P+P + + +Y + F + P P
Sbjct: 247 YTFESDVWSYGIFLWELFSLG-SSPYPGMP-------VDSKFYKMIKEGFRMLSPEHAPA 298
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSN 223
++YD+M CW D RPTFKQI +++ + +N
Sbjct: 299 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTN 334
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 25/145 (17%)
Query: 6 VQWNISPSM-GQSYKCREGDVVP------IPRYCLRVLERLGSCHLGEMMICETED-IEL 57
VQW + + G +Y + +P PR L + LG+ G+++ I+
Sbjct: 14 VQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKS 73
Query: 58 DTE-KVAVR--------TCRGDSLREIRFLSSLQDP-NLVSILGVCTGEQPPWLVMEYPA 107
D VAV+ T R + E++ LS L + N+V++LG CT P ++ EY
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY-C 132
Query: 108 QLGDLVQHLNSADNLTRDRDRYTCQ 132
GDL+ L R RD + C
Sbjct: 133 CYGDLLNFLR------RKRDSFICS 151
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 80 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 130
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 131 AEGMGYLESKRFIH 144
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 249 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 201 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 254 IYNVMVQCWAHKPEDRPTFVALRDFL 279
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 80 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 130
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 131 AEGMGYLESKRFIH 144
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
R+T +S+VWSF V LWE+L+ P+ H+ + H G LP+P CP
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGA-PPYRHIDPF----DLTHFLAQGRR---LPQPEYCPD 255
Query: 188 DIYDLMCDCWKRDQTMRPTFK 208
+Y +M CW+ D +RPTF+
Sbjct: 256 SLYQVMQQCWEADPAVRPTFR 276
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 230 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 281
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 282 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 312
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 251 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 254
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 255 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 285
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 193 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 244
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 245 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 275
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 202 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 253
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 254 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 284
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 251
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 248
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 249 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 279
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI++L + P+P + E++ + + + +P C +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CWK++ RP F I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCRG----- 69
++K E PR L + + LG G+++ ++ VAV+ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 70 ---DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA 119
D L E L + P+++ + G C+ + P L++EY A+ G L L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY-AKYGSLRGFLRES 120
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 250 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI++L + P+P + E++ + + + +P C +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CWK++ RP F I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCRG----- 69
++K E PR L + + LG G+++ ++ VAV+ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 70 ---DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA 119
D L E L + P+++ + G C+ + P L++EY A+ G L L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY-AKYGSLRGFLRES 120
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 221 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 272
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 273 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 303
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 74 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 124
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 125 AEGMGYLESKRFIH 138
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 190 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 241
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 272
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI++L + P+P + E++ + + + +P C +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGN-PYPGIPPERLFNLLKTGHR-------MERPDNCSEE 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y LM CWK++ RP F I
Sbjct: 281 MYRLMLQCWKQEPDKRPVFADI 302
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 17 SYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIE--LDTEKVAVRTCRG----- 69
++K E PR L + + LG G+++ ++ VAV+ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 70 ---DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA 119
D L E L + P+++ + G C+ + P L++EY A+ G L L +
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY-AKYGSLRGFLRES 120
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 248 IYNVMVQCWAHKPEDRPTFVALRDFL 273
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 74 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 124
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 125 AEGMGYLESKRFIH 138
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 251
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 252 VYMIMVKCWMIDADSRPKFRELIIEFSKMAR 282
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 70 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 120
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 121 AEGMGYLESKRFIH 134
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 119 ADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
ADNL YT S+VW+F VT+WEI++ + P+ + N ++ ++ G L+
Sbjct: 212 ADNL------YTVHSDVWAFGVTMWEIMTRGQ-TPYAGIENAEIYN---YLIGGNRLK-- 259
Query: 179 LPKPSLCPRDIYDLMCDCWKRDQTMRPTF 207
+P C ++YDLM CW D RP+F
Sbjct: 260 --QPPECMEEVYDLMYQCWSADPKQRPSF 286
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 70 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 120
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 121 AEGMGYLESKRFIH 134
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +S+VWSF + L+EI++ + P+P TN V+ Y +P+ CP +
Sbjct: 188 FTIKSDVWSFGILLYEIVTYGK-IPYPGRTNADVMTALSQGYR-------MPRVENCPDE 239
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+YD+M CWK RPTF + S +
Sbjct: 240 LYDIMKMCWKEKAEERPTFDYLQSVL 265
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D IPR +++++RLG+ GE+ + + + KVAV+T + + L E
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNN----STKVAVKTLKPGTMSVQAFLEEANL 61
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
+ +LQ LV + V T E+P +++ EY A+ G L+ L S
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAK-GSLLDFLKS 101
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWEI + + +P+ L+N + I + + G EL+ +P CP
Sbjct: 236 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 287
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y +M CW+R+ R + K +++ ++
Sbjct: 288 EVYAIMRGCWQREPQQRHSIKDVHARLQ 315
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 9 NISPSMGQSYKCREGDVVPIPRY----CLRVLER--------LGSCHLGEMMICETEDI- 55
++SP+ G+ +G ++ P+Y C+ ++R LG G++ + E ++
Sbjct: 8 SLSPTEGKGSGL-QGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLL 66
Query: 56 -ELDTEKVAVR-------TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPA 107
E D VAV+ + R D RE L+ LQ ++V GVCT +P +V EY
Sbjct: 67 PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY-M 125
Query: 108 QLGDLVQHLNS 118
+ GDL + L S
Sbjct: 126 RHGDLNRFLRS 136
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
++ S+ W F VTLWE+ + ++ P+ L Q++ + GE LP+P CP+D
Sbjct: 191 FSHASDTWMFGVTLWEMFTYGQE-PWIGLNGSQILHKIDKE---GER---LPRPEDCPQD 243
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
IY++M CW RPTF + F+
Sbjct: 244 IYNVMVQCWAHKPEDRPTFVALRDFL 269
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL----------REIRFLSSLQ 82
LR+LE+LG G + E + T VAV+ + D L RE+ + SL
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 83 DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
NL+ + GV PP ++ A LG L+ L R + + +AV +
Sbjct: 70 HRNLIRLYGVVL--TPPMKMVTELAPLGSLLDRL-------RKHQGHFLLGTLSRYAVQV 120
Query: 143 WEILSLCRDKPFPH 156
E + K F H
Sbjct: 121 AEGMGYLESKRFIH 134
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWEI + + +P+ L+N + I + + G EL+ +P CP
Sbjct: 207 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 258
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y +M CW+R+ R + K +++ ++
Sbjct: 259 EVYAIMRGCWQREPQQRHSIKDVHARLQ 286
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 39 LGSCHLGEMMICETEDI--ELDTEKVAVR-------TCRGDSLREIRFLSSLQDPNLVSI 89
LG G++ + E ++ E D VAV+ + R D RE L+ LQ ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
GVCT +P +V EY + GDL + L S
Sbjct: 80 FGVCTEGRPLLMVFEY-MRHGDLNRFLRS 107
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWEI + + +P+ L+N + I + + G EL+ +P CP
Sbjct: 213 KFTTESDVWSFGVVLWEIFTYGK-QPWYQLSNTEAI---DCITQGRELE----RPRACPP 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y +M CW+R+ R + K +++ ++
Sbjct: 265 EVYAIMRGCWQREPQQRHSIKDVHARLQ 292
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 39 LGSCHLGEMMICETEDI--ELDTEKVAVR-------TCRGDSLREIRFLSSLQDPNLVSI 89
LG G++ + E ++ E D VAV+ + R D RE L+ LQ ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
GVCT +P +V EY + GDL + L S
Sbjct: 86 FGVCTEGRPLLMVFEY-MRHGDLNRFLRS 113
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAV 60
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 98
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 442
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 443 EKVYELMRACWQWNPSDRPSFAEIH 467
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAV 266
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 304
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAV 60
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 98
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 445
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 446 EKVYELMRACWQWNPSDRPSFAEIH 470
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+ R + + +LG GE+ + L VAV+T + D+ L+E + +
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEI 273
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 274 KHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 307
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 484
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 485 EKVYELMRACWQWNPSDRPSFAEIH 509
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSL 81
+ R + + +LG GE+ + L VAV+T + D+ L+E + +
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEI 312
Query: 82 QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 313 KHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 346
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDPSQVYELLEKDYR-------MERPEGCP 236
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAEIH 261
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 18 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P ++++E+ G+L+ +L
Sbjct: 75 VCTREPPFYIIIEF-MTYGNLLDYL 98
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P ++++E+ G+L+ +L
Sbjct: 77 VCTREPPFYIIIEF-MTYGNLLDYL 100
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAV 62
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 100
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 82 VCTREPPFYIITEF-MTYGNLLDYL 105
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 239
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIH 264
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 78 VCTREPPFYIITEF-MTYGNLLDYL 101
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 239
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAEIH 264
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P ++++E+ G+L+ +L
Sbjct: 78 VCTREPPFYIIIEF-MTYGNLLDYL 101
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAV 67
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 105
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 250 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 250
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 251 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 281
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAV 64
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 102
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAV 64
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 102
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAV 62
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 100
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P ++++E+ G+L+ +L
Sbjct: 77 VCTREPPFYIIIEF-MTYGNLLDYL 100
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 249
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 250 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 280
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 247
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 248 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 240
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAEIH 265
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 22 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 79 VCTREPPFYIITEF-MTYGNLLDYL 102
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT S+VWS+ V LWEI+SL P+ +T ++ + Y L KP C +
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 266
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+YDLM CW+ RP+F QI + R
Sbjct: 267 VYDLMRQCWREKPYERPSFAQILVSLNR 294
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 82 VCTREPPFYIITEF-MTYGNLLDYL 105
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 11/91 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWS+ VT+WE+++ KP+ + ++ E GE LP+P +C D
Sbjct: 206 YTHQSDVWSYGVTVWELMTFG-SKPYDGIPASEISSILEK----GER---LPQPPICTID 257
Query: 189 IYDLMCDCWKRDQTMRPTFKQI---YSFMKR 216
+Y +M CW D RP F+++ +S M R
Sbjct: 258 VYMIMRKCWMIDADSRPKFRELIIEFSKMAR 288
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 251
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAEIH 276
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRF 77
D + R + + +LG GE+ + L VAV+T + D+ L+E
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAV 75
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 113
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT S+VWS+ V LWEI+SL P+ +T ++ + Y L KP C +
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 269
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+YDLM CW+ RP+F QI + R
Sbjct: 270 VYDLMRQCWREKPYERPSFAQILVSLNR 297
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 242
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIH 267
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 23 GDVVPIPRYCLRVLER--------LGSCHLGEMMICETEDIELDTEKVAVRTCRGDS--- 71
G + P P Y +ER LG GE+ + L VAV+T + D+
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEV 57
Query: 72 ---LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
L+E + ++ PNLV +LGVCT E P +++ E+ G+L+ +L
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF-MTYGNLLDYL 104
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT S+VWS+ V LWEI+SL P+ +T ++ + Y L KP C +
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLG-GTPYCGMTCAELYEKLPQGYR-------LEKPLNCDDE 259
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
+YDLM CW+ RP+F QI + R
Sbjct: 260 VYDLMRQCWREKPYERPSFAQILVSLNR 287
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 77 VCTREPPFYIITEF-MTYGNLLDYL 100
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P ++++E+ G+L+ +L
Sbjct: 82 VCTREPPFYIIIEF-MTYGNLLDYL 105
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 243
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAEIH 268
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 25 KLGGGQYGEVYEGVWKKYSL---TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 82 VCTREPPFYIITEF-MTYGNLLDYL 105
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
++++ +S+VW+F V LWEI + P+P + QV + E Y + +P CP
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYELLEKDYR-------MERPEGCP 238
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CW+ + + RP+F +I+
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIH 263
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS------LREIRFLSSLQDPNLVSILG 91
+LG GE+ + L VAV+T + D+ L+E + ++ PNLV +LG
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 92 VCTGEQPPWLVMEYPAQLGDLVQHL 116
VCT E P +++ E+ G+L+ +L
Sbjct: 77 VCTREPPFYIITEF-MTYGNLLDYL 100
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 125
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S L N+V +GV P ++++E A GDL L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 125
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 139
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 240 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 291
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 292 VYRIMTQCWQHQPEDRPNFAII 313
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 142
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S L N+V +GV P ++++E A GDL L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 139
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 223 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 274
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 275 VYRIMTQCWQHQPEDRPNFAII 296
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 125
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 237 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 288
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 289 VYRIMTQCWQHQPEDRPNFAII 310
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P +++ME A GDL L
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG-GDLKSFL 139
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 263 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 314
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 315 VYRIMTQCWQHQPEDRPNFAII 336
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 165
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 229 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 280
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 281 VYRIMTQCWQHQPEDRPNFAII 302
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 131
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ S++WS+ V LWE+ S +P+ +N+ V++ + + LP P CP
Sbjct: 206 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRN-------RQVLPCPDDCPA 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN 219
+Y LM +CW + RP FK I+S ++ N
Sbjct: 258 WVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 289
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 23 GDVVPIPRYCLRVLERLGSCHLGEMMIC---------ETEDIELDTEK-VAVRTCRGDSL 72
G + I +R +E LG G++ +T+ + + T K A R +
Sbjct: 1 GKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E + LQ PN+V +LGV T +QP ++ Y + GDL + L
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH-GDLHEFL 103
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT +S+VW+F VT+WEI + P+P + N ++ +++ +G L+ +P C +
Sbjct: 226 YTSKSDVWAFGVTMWEIATRGM-TPYPGVQNHEMY---DYLLHGHRLK----QPEDCLDE 277
Query: 189 IYDLMCDCWKRDQTMRPTF 207
+Y++M CW+ D RPTF
Sbjct: 278 LYEIMYSCWRTDPLDRPTF 296
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 9 NISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCR 68
+ P + + + DVV I R L + + LG G +M + + + KVAV+T +
Sbjct: 13 GLVPRGSEELQNKLEDVV-IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK 71
Query: 69 GD--SLREIR-FLSS------LQDPNLVSILGVCT-----GEQPPWLVMEYPAQLGDLVQ 114
D S REI FLS PN++ +LGVC G P +++ + + GDL
Sbjct: 72 LDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF-MKYGDLHT 130
Query: 115 HL 116
+L
Sbjct: 131 YL 132
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 239 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 290
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 291 VYRIMTQCWQHQPEDRPNFAII 312
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 141
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAII 295
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 124
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 249 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 300
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 301 VYRIMTQCWQHQPEDRPNFAII 322
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 151
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 214 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 265
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 266 VYRIMTQCWQHQPEDRPNFAII 287
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P ++++E A GDL L
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG-GDLKSFL 116
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
+T +++ WSF V LWEI SL P+P +N++V+ E + GG + P CP
Sbjct: 222 FTSKTDTWSFGVLLWEIFSLGY-MPYPSKSNQEVL---EFVTSGGRMD----PPKNCPGP 273
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F I
Sbjct: 274 VYRIMTQCWQHQPEDRPNFAII 295
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 11/103 (10%)
Query: 24 DVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTE--KVAVRTC--------RGDSLR 73
D+ +PR + ++ LG GE+ + + D +VAV+T D L
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 74 EIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E +S N+V +GV P +++ME A GDL L
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAG-GDLKSFL 124
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ S++WS+ V LWE+ S +P+ +N+ V++ + + LP P CP
Sbjct: 223 KFSIDSDIWSYGVVLWEVFSYGL-QPYCGYSNQDVVEMIRN-------RQVLPCPDDCPA 274
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTN 219
+Y LM +CW + RP FK I+S ++ N
Sbjct: 275 WVYALMIECWNEFPSRRPRFKDIHSRLRAWGN 306
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 21 REGDVVPIPRYCLRVLERLGSCHLGEMMIC---------ETEDIELDTEK-VAVRTCRGD 70
++ + I +R +E LG G++ +T+ + + T K A R +
Sbjct: 16 KQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREE 75
Query: 71 SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
E + LQ PN+V +LGV T +QP ++ Y + GDL + L
Sbjct: 76 FRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH-GDLHEFL 120
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+Y+ +S+VW+F + +WE+ SL + P+ TN +V+ + L +P L
Sbjct: 181 KYSSKSDVWAFGILMWEVFSLGK-MPYDLYTNSEVVLKVSQGHR-------LYRPHLASD 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
IY +M CW RPTF+Q+ S
Sbjct: 233 TIYQIMYSCWHELPEKRPTFQQLLS 257
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQ----- 82
+ R + +L+ LGS G + + + + VAV+ + S+ E F Q
Sbjct: 5 LKREEITLLKELGSGQFGVVKLGKWKG----QYDVAVKMIKEGSMSEDEFFQEAQTMMKL 60
Query: 83 -DPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNS 118
P LV GVC+ E P ++V EY + G L+ +L S
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISN-GCLLNYLRS 96
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 266
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEY 112
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 235
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 236 EMYDLMNLCWTYDVENRPGFAAV 258
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 224 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 279
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 13 SMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-- 69
+MG +++ R D L+ L++LG + G + +C + ++ +T E VAV+ +
Sbjct: 25 AMGSAFEDR--DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 82
Query: 70 -----DSLREIRFLSSLQDPNLVSILGVC--TGEQPPWLVMEY 105
D REI L SLQ N+V GVC G + L+MEY
Sbjct: 83 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 211 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 266
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 89
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 90 NIVKYKGVCYSAGRRNLKLIMEY 112
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 242 EMYDLMNLCWTYDVENRPGFAAV 264
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 237
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 238 EMYDLMNLCWTYDVENRPGFAAV 260
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 200 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 255
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 256 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 15 GQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG---- 69
G S + D L+ L++LG + G + +C + ++ +T E VAV+ +
Sbjct: 1 GSSGAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 60
Query: 70 ---DSLREIRFLSSLQDPNLVSILGVC--TGEQPPWLVMEY 105
D REI L SLQ N+V GVC G + L+MEY
Sbjct: 61 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 101
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 600
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 601 EMYDLMNLCWTYDVENRPGFAAV 623
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 247
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 248 EMYDLMNLCWTYDVENRPGFAAV 270
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 242 EMYDLMNLCWTYDVENRPGFAAV 264
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 198 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 253
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 254 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 76
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 77 NIVKYKGVCYSAGRRNLKLIMEY 99
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEY 97
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 199 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 254
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 255 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 77
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 78 NIVKYKGVCYSAGRRNLKLIMEY 100
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEY 94
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEY 94
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 194 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 249
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 250 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 72
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 73 NIVKYKGVCYSAGRRNLKLIMEY 95
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 197 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 252
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 253 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 75
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 76 NIVKYKGVCYSAGRRNLKLIMEY 98
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEY 97
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V M GE + P+ CPR
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTA----MLEKGER---MGCPAGCPR 599
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 600 EMYDLMNLCWTYDVENRPGFAAV 622
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 193 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 248
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 71
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEY 94
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 255
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 256 EMYDLMNLCWTYDVENRPGFAAV 278
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 191 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 246
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 247 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 280
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 69
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 70 NIVKYKGVCYSAGRRNLKLIMEY 92
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 258 EMYDLMNLCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWSF V +WE S + KP+ + +V E GE + P+ CPR
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQ-KPYRGMKGSEVTAMLEK----GER---MGCPAGCPR 257
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
++YDLM CW D RP F +
Sbjct: 258 EMYDLMNLCWTYDVENRPGFAAV 280
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 196 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 251
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L +LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 74
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+ME+
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEF 97
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF--------- 178
+++ S+VWSF V L+E+ + P ++I N + G++ VF
Sbjct: 192 KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ----GQMIVFHLIELLKNN 247
Query: 179 --LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP+P CP +IY +M +CW + RP+F+ +
Sbjct: 248 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT-EKVAVRTCRG-------DSLREIRFLSSLQDP 84
L+ L++LG + G + +C + ++ +T E VAV+ + D REI L SLQ
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHD 70
Query: 85 NLVSILGVC--TGEQPPWLVMEY 105
N+V GVC G + L+MEY
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEY 93
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNE----QVIQNAEHMYYGGELQVFLPKPSL 184
YT +S+VWS+ + LWEI SL + P+P + + ++IQN M +P
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVN-PYPGIPVDANFYKLIQNGFKM----------DQPFY 299
Query: 185 CPRDIYDLMCDCWKRDQTMRPTFKQIYSFM 214
+IY +M CW D RP+F + SF+
Sbjct: 300 ATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELD--TEKVAVRTCR--GDS------LREIRF 77
PR L + LGS G++M I + +VAV+ + DS + E++
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 78 LSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSA-DNLTRDRDRYTCQ 132
++ L N+V++LG CT P +L+ EY GDL+ +L S + + D Y Q
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCC-YGDLLNYLRSKREKFSEDEIEYENQ 157
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CWK RP F ++
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRL 254
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T R ++ E F+ L P L
Sbjct: 9 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 65 VQLYGVCLEQAPICLVFEF-------MEHGCLSDYLRTQRGLFAAET 104
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 251
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CWK RP F ++
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRL 274
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T + S+ E F+ L P L
Sbjct: 29 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKL 84
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 85 VQLYGVCLEQAPICLVFEF-------MEHGCLSDYLRTQRGLFAAET 124
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 231
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CWK RP F ++
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRL 254
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T R ++ E F+ L P L
Sbjct: 9 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 64
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 65 VQLYGVCLEQAPICLVFEF-------MEHGCLSDYLRTQRGLFAAET 104
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 229
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CWK RP F ++
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRL 252
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T R ++ E F+ L P L
Sbjct: 7 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 62
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 63 VQLYGVCLEQAPICLVFEF-------MEHGCLSDYLRTQRGLFAAET 102
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFXRRLKEGTRMRA----PDYTTPE 275
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSEL 297
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 234
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F ++
Sbjct: 235 HVYQIMNHCWRERPEDRPAFSRL 257
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T R ++ E F+ L P L
Sbjct: 12 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 67
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 68 VQLYGVCLEQAPICLVFEF-------MEHGCLSDYLRTQRGLFAAET 107
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
RY+ +S+VWSF V +WE+ S + P+ + +N +V+++ + L KP L
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGK-IPYENRSNSEVVEDISTGFR-------LYKPRLAST 232
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
+Y +M CW+ RP F ++
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRL 255
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLS------SLQDPNL 86
L ++ +GS G + + L+ +KVA++T R ++ E F+ L P L
Sbjct: 10 LTFVQEIGSGQFGLVHL----GYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL 65
Query: 87 VSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQS 133
V + GVC + P LV E+ ++H +D L R + ++
Sbjct: 66 VQLYGVCLEQAPICLVTEF-------MEHGCLSDYLRTQRGLFAAET 105
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 279 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 331
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSEL 353
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 272 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 324
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSEL 346
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 277 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 329
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSEL 351
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 270 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 322
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSEL 344
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 323
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 324 PLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR-GDSLREIRFLSSL--- 81
PR L++ + LG G+++ + I+ VAV+ + G + E R L S
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 82 -----QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
N+V++LG CT P +V+ + G+L +L S N
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 275
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 276 MYQTMLDCWHGEPSQRPTFSEL 297
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 316
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 317 MYQTMLDCWHGEPSQRPTFSEL 338
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 127 DRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCP 186
+ ++ +S+VW+F V LWEI + P+P + QV E Y + +P CP
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMS-PYPGIDLSQVYDLLEKGYR-------MEQPEGCP 257
Query: 187 RDIYDLMCDCWKRDQTMRPTFKQIY 211
+Y+LM CWK RP+F + +
Sbjct: 258 PKVYELMRACWKWSPADRPSFAETH 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR-GDSLREIRFLSSL--- 81
PR L++ + LG G+++ + I+ VAV+ + G + E R L S
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 82 -----QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
N+V++LG CT P +V+ + G+L +L S N
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 282
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 283 PLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+Y M DCW + + RPTF ++ +
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQIYSFM 214
+Y M DCW + + RPTF ++ +
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 263
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 281
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 282 MYQTMLDCWHGEPSQRPTFSEL 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGAS-PYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 270
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 271 MYQTMLDCWHGEPSQRPTFSEL 292
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 28 IPRYCLRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR-GDSLREIRFLSSL--- 81
PR L++ + LG G+++ + I+ VAV+ + G + E R L S
Sbjct: 15 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 74
Query: 82 -----QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADN 121
N+V++LG CT P +V+ + G+L +L S N
Sbjct: 75 LIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRN 119
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
YT QS+VWSF V LWEI SL P+P + ++ + + G ++ P +
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGA-SPYPGVKIDE--EFCRRLKEGTRMRA----PDYTTPE 279
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
+Y M DCW + + RPTF ++
Sbjct: 280 MYQTMLDCWHGEPSQRPTFSEL 301
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 283
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 284 PLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 269
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 270 PLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 265
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 266 PLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 256
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 257 PLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 262
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 263 PLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 261
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 262 PLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 263
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 264 PLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 208 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 259
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 260 PLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
++T +S+VWSF V LWE+++ P+P + + ++ G L +P CP
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGA-PPYPDVNTFDI---TVYLLQGRRLL----QPEYCPD 264
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYS 212
+Y++M CW MRP+F ++ S
Sbjct: 265 PLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGEL-QVFLPKPSLCPR 187
++ S+VWS+ V LWE+L+ + PF + V YG + ++ LP PS CP
Sbjct: 191 FSKGSDVWSYGVLLWELLT--GEVPFRGIDGLAV-------AYGVAMNKLALPIPSTCPE 241
Query: 188 DIYDLMCDCWKRDQTMRPTFKQI 210
LM DCW D RP+F I
Sbjct: 242 PFAKLMEDCWNPDPHSRPSFTNI 264
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 60 EKVAVRTCRGDS-----------LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
++VAV+ R D +E + + L+ PN++++ GVC E LVME+
Sbjct: 31 DEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEF 87
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWS+ VT+WE LS + KP+ + +V+ E G ++ P CP
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQ---GKRMEC----PPECPP 566
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y LM DCW RP F + M+
Sbjct: 567 ELYALMSDCWIYKWEDRPDFLTVEQRMR 594
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRD 188
Y+ +S+VWS+ V LWEI SL P+P + ++ + G ++ P +
Sbjct: 278 YSTKSDVWSYGVLLWEIFSLG-GSPYPGVQMDEDF--CSRLREGMRMRA----PEYSTPE 330
Query: 189 IYDLMCDCWKRDQTMRPTFKQI 210
IY +M DCW RD RP F ++
Sbjct: 331 IYQIMLDCWHRDPKERPRFAEL 352
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 72 LREIRFLSSL-QDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
+ E++ L+ + N+V++LG CT + P +V+ + G+L +L S +L
Sbjct: 78 MTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDL 129
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 128 RYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPR 187
+++ +S+VWS+ VT+WE LS + KP+ + +V+ E G ++ P CP
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQ-KPYKKMKGPEVMAFIEQ---GKRMEC----PPECPP 240
Query: 188 DIYDLMCDCWKRDQTMRPTFKQIYSFMK 215
++Y LM DCW RP F + M+
Sbjct: 241 ELYALMSDCWIYKWEDRPDFLTVEQRMR 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D + ++ QS+V+S+ + L+E+++ + P+ H+ N +Q+I Y +L
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMT--GELPYSHINNRDQIIFMVGRGYASPDLSKLYKN- 265
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
CP+ + L+ DC K+ + RP F QI S
Sbjct: 266 --CPKAMKRLVADCVKKVKEERPLFPQILS 293
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
++ QS+VWSF V L+E+ + C P + +E+ + + E LP P
Sbjct: 194 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAP 253
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
CP ++++LM CW RP+F +
Sbjct: 254 PACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 81 LQDPNLVSI--LGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
L + N V I G+ T E+ W QL + + +D + Y+ QS+V++F
Sbjct: 153 LHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 139 AVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK-PSLCPRDIYDLMCDC 196
+ L+E+++ P+ ++ N +Q+I+ M G L L K S CP+ + LM +C
Sbjct: 212 GIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKVRSNCPKRMKRLMAEC 265
Query: 197 WKRDQTMRPTFKQIYS 212
K+ + RP+F +I +
Sbjct: 266 LKKKRDERPSFPRILA 281
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 11/136 (8%)
Query: 81 LQDPNLVSI--LGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSF 138
L + N V I G+ T E+ W QL + + +D + Y+ QS+V++F
Sbjct: 153 LHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 139 AVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK-PSLCPRDIYDLMCDC 196
+ L+E+++ P+ ++ N +Q+I+ M G L L K S CP+ + LM +C
Sbjct: 212 GIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKVRSNCPKRMKRLMAEC 265
Query: 197 WKRDQTMRPTFKQIYS 212
K+ + RP+F +I +
Sbjct: 266 LKKKRDERPSFPRILA 281
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 240
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 241 SNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 237
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 238 SNCPKAMKRLMAECLKKKRDERPLFPQILA 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 235
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 236 SNCPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 240
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 241 SNCPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 208 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 262
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 263 SNCPKAMKRLMAECLKKKRDERPLFPQILA 292
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 263
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 264 SNCPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 209 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 263
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 264 SNCPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPKP 182
+D++ Y+ QS+V++F + L+E+++ P+ ++ N +Q+I Y +L
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIFMVGRGYLSPDLSKV---R 255
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP F QI +
Sbjct: 256 SNCPKAMKRLMAECLKKKRDERPLFPQILA 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 124 RDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTN-EQVIQNAEHMYYGGELQVFLPK- 181
+D + Y+ QS+V++F + L+E+++ P+ ++ N +Q+I+ M G L L K
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMT--GQLPYSNINNRDQIIE----MVGRGSLSPDLSKV 238
Query: 182 PSLCPRDIYDLMCDCWKRDQTMRPTFKQIYS 212
S CP+ + LM +C K+ + RP+F +I +
Sbjct: 239 RSNCPKRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGELQVFLPKPS 183
+ Y+ + +V+S+ + LWE+++ R KPF + I A H L LPKP
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP- 233
Query: 184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLD 225
I LM CW +D + RP+ ++I M Y D
Sbjct: 234 -----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 270
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGV 92
+ V E +G G + + ++ +++ + R + E+R LS + PN+V + G
Sbjct: 11 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 93 CTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
C P LVMEY A+ G L L+ A+ L
Sbjct: 71 CL--NPVCLVMEY-AEGGSLYNVLHGAEPL 97
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQV-IQNAEHMYYGGELQVFLPKPS 183
+ Y+ + +V+S+ + LWE+++ R KPF + I A H L LPKP
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVIT--RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKP- 232
Query: 184 LCPRDIYDLMCDCWKRDQTMRPTFKQIYSFMKRSTNYKSNLD 225
I LM CW +D + RP+ ++I M Y D
Sbjct: 233 -----IESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGV 92
+ V E +G G + + ++ +++ + R + E+R LS + PN+V + G
Sbjct: 10 IEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 93 CTGEQPPWLVMEYPAQLGDLVQHLNSADNL 122
C P LVMEY A+ G L L+ A+ L
Sbjct: 70 CL--NPVCLVMEY-AEGGSLYNVLHGAEPL 96
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
++ QS+VWSF V L+E+ + C P + E+ + + E LP P
Sbjct: 207 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAP 266
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
CP ++++LM CW RP+F +
Sbjct: 267 PACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF------- 178
+ ++ S+VWSF VTL E+L+ C P ++I G++ V
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH-----GQMTVTRLVNTLK 257
Query: 179 ----LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP P CP ++Y LM CW+ + R +F+ +
Sbjct: 258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR--------GDS 71
E D + L+ + LG H G++ +C D E D E+VAV++ + D
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRY-DPEGDNTGEQVAVKSLKPESGGNHIADL 70
Query: 72 LREIRFLSSLQDPNLVSILGVCT--GEQPPWLVMEY-PAQLGDLVQHLNSADNLTRDRDR 128
+EI L +L N+V G+CT G L+ME+ P+ G L ++ L +++++
Sbjct: 71 KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS--GSLKEY------LPKNKNK 122
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH--LTNEQVIQNAEHMYYGGEL 175
+ + +AV + + + + + H L V+ +EH G+
Sbjct: 123 INLKQQL-KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDF 170
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)
Query: 126 RDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF------- 178
+ ++ S+VWSF VTL E+L+ C P ++I G++ V
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTH-----GQMTVTRLVNTLK 245
Query: 179 ----LPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
LP P CP ++Y LM CW+ + R +F+ +
Sbjct: 246 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 281
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 33 LRVLERLGSCHLGEMMICETEDIELDT--EKVAVRTCR--------GDSLREIRFLSSLQ 82
L+ + LG H G++ +C D E D E+VAV++ + D +EI L +L
Sbjct: 11 LKRIRDLGEGHFGKVELCRY-DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY 69
Query: 83 DPNLVSILGVCT--GEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVWSFAV 140
N+V G+CT G L+ME+ G L ++ L +++++ + + +AV
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPS-GSLKEY------LPKNKNKINLKQQL-KYAV 121
Query: 141 TLWEILSLCRDKPFPH--LTNEQVIQNAEHMYYGGEL 175
+ + + + + H L V+ +EH G+
Sbjct: 122 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDF 158
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
++ QS+VWSF V L+E+ + C P + E+ + + E LP P
Sbjct: 191 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 250
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
CP ++++LM CW RP+F +
Sbjct: 251 PACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 129 YTCQSNVWSFAVTLWEILSLCRDKPFPH------LTNEQVIQNAEHMYYGGELQVFLPKP 182
++ QS+VWSF V L+E+ + C P + E+ + + E LP P
Sbjct: 195 FSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAP 254
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
CP ++++LM CW RP+F +
Sbjct: 255 PACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 18/109 (16%)
Query: 12 PSMGQSYKCREGDVVPI-----PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRT 66
P+ G++ ++ DV + P L +G G + D+ ++E VA++
Sbjct: 30 PAGGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFAR--DVR-NSEVVAIKK 86
Query: 67 CR----------GDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
D ++E+RFL L+ PN + G E WLVMEY
Sbjct: 87 MSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGE-LQVFLPKPSLCPRDIYD 191
+++WSFAV LWE+++ R+ PF L+N ++ M E L+ +P P + P +
Sbjct: 192 ADMWSFAVLLWELVT--REVPFADLSNMEI-----GMKVALEGLRPTIP-PGISPH-VSK 242
Query: 192 LMCDCWKRDQTMRPTFKQIYSFMKR 216
LM C D RP F I +++
Sbjct: 243 LMKICMNEDPAKRPKFDMIVPILEK 267
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL 192
++ WSF TLWEI S DKP L +++ +Q +Y Q+ PK + ++ +L
Sbjct: 199 TDKWSFGTTLWEICS-GGDKPLSALDSQRKLQ-----FYEDRHQLPAPKAA----ELANL 248
Query: 193 MCDCWKRDQTMRPTFKQI 210
+ +C + RP+F+ I
Sbjct: 249 INNCMDYEPDHRPSFRAI 266
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL 192
++ WSF TLWEI S DKP L +++ +Q +Y Q+ PK + ++ +L
Sbjct: 199 TDKWSFGTTLWEICS-GGDKPLSALDSQRKLQ-----FYEDRHQLPAPKAA----ELANL 248
Query: 193 MCDCWKRDQTMRPTFKQI 210
+ +C + RP+F+ I
Sbjct: 249 INNCMDYEPDHRPSFRAI 266
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 70 DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
D ++E+RFL L+ PN + G E WLVMEY
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 86 --DLKKFMDAS 94
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 31 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 88 --DLKKFMDAS 96
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 86 --DLKKFMDAS 94
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 31 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 88 --DLKKFMDAS 96
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 86 --DLKKFMDAS 94
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 37 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 94 --DLKKFMDAS 102
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 34 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 91 --DLKKFMDAS 99
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 31 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 88 --DLKKFMDAS 96
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 34 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 91 --DLKKFMDAS 99
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 32 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 89 --DLKKFMDAS 97
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 37 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 94 --DLKKFMDAS 102
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 86 --DLKKFMDAS 94
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 32 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 89 --DLKKFMDAS 97
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 31 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 88 --DLKKFMDAS 96
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 90 --DLKKFMDAS 98
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 32 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 89 --DLKKFMDAS 97
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 90 --DLKKFMDAS 98
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 89
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL---------REIRFLSSLQDP 84
R+L+ +G + ++ + L ++VAVR L RE+R + L P
Sbjct: 17 RLLKTIGKGNFAKVKLARHI---LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 85 NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
N+V + V E+ +LVMEY A G++ +L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 104
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL---------REIRFLSSLQDP 84
R+L+ +G + ++ + L ++VAVR L RE+R + L P
Sbjct: 17 RLLKTIGKGNFAKVKLARHI---LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 85 NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
N+V + V E+ +LVMEY A G++ +L
Sbjct: 74 NIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 104
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 90 --DLKKFMDAS 98
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+
Sbjct: 31 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 84
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+
Sbjct: 32 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 85
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+ + I LDTE V + ++REI L L PN+V +L V E +LV E+
Sbjct: 33 VVALKKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 86
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 30 VVALXKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 87 --DLKKFMDAS 95
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQ 108
+ I LDTE V + ++REI L L PN+V +L V E +LV E+ Q
Sbjct: 29 VVALXKIRLDTETEGVPST---AIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 109 LGDLVQHLNSA 119
DL + ++++
Sbjct: 86 --DLKKFMDAS 94
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 133 SNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYDL 192
++ WSFAV LWE+++ R+ PF L+N ++ + G L+ +P P + P + L
Sbjct: 192 ADXWSFAVLLWELVT--REVPFADLSNXEI---GXKVALEG-LRPTIP-PGISPH-VSKL 243
Query: 193 MCDCWKRDQTMRPTFKQIYSFMKR 216
C D RP F I +++
Sbjct: 244 XKICXNEDPAKRPKFDXIVPILEK 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+R + L PN+V + V E+ +LVMEY A G++ +L
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 104
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+R + L PN+V + V E+ +LVMEY A G++ +L
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 104
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+R + L PN+V + V E+ +LVMEY A G++ +L
Sbjct: 61 FREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 104
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 34 RVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSL---------REIRFLSSLQDP 84
R+L+ +G + ++ + L ++VAV+ L RE+R + L P
Sbjct: 10 RLLKTIGKGNFAKVKLARHI---LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 85 NLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
N+V + V E+ +LVMEY A G++ +L
Sbjct: 67 NIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 97
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+R + L PN+V + V E+ +LVMEY A G++ +L
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEY-ASGGEVFDYL 105
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 34.3 bits (77), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 39 LGSCHLGEMMICETED----------IELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVS 88
+G G +M C +D +E D +K+ + ++REI+ L L+ NLV+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI----AMREIKLLKQLRHENLVN 88
Query: 89 ILGVCTGEQPPWLVMEY 105
+L VC ++ +LV E+
Sbjct: 89 LLEVCKKKKRWYLVFEF 105
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 34.3 bits (77), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 8/130 (6%)
Query: 11 SPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEMMIC---ETEDIELDTEKVAVRTC 67
+P Q K E + P VLE+LG G + ET I + ++V V +
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQI-VAIKQVPVESD 67
Query: 68 RGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY--PAQLGDLVQHLNSADNLTRD 125
+ ++EI + P++V G W+VMEY + D+++ N LT D
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK--TLTED 125
Query: 126 RDRYTCQSNV 135
QS +
Sbjct: 126 EIATILQSTL 135
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
RE+R + L PN+V + V E+ +L+MEY A G++ +L + + R
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY-ASGGEVFDYLVAHGRMKEKEAR 117
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
RE+R + L PN+V + V E+ +L+MEY A G++ +L + + R
Sbjct: 59 FREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY-ASGGEVFDYLVAHGRMKEKEAR 114
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----LREIRF 77
+GD + IP L + E++G+ G + E ++ + + + + LRE+
Sbjct: 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAI 87
Query: 78 LSSLQDPNLVSILGVCTGEQPPWL--VMEY 105
+ L+ PN+V +G T QPP L V EY
Sbjct: 88 MKRLRHPNIVLFMGAVT--QPPNLSIVTEY 115
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 132 QSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD 191
+S+V+SF V LWE+ +L +P+ +L QV+ A + L++ P+ +L P+ +
Sbjct: 219 KSDVYSFGVILWELATL--QQPWGNLNPAQVV--AAVGFKCKRLEI--PR-NLNPQ-VAA 270
Query: 192 LMCDCWKRDQTMRPTFKQIYSFMK 215
++ CW + RP+F I ++
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 22 EGDVVPIPRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDS----LREIRF 77
+GD + IP L + E++G+ G + E ++ + + + + LRE+
Sbjct: 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAI 87
Query: 78 LSSLQDPNLVSILGVCTGEQPPWL--VMEY 105
+ L+ PN+V +G T QPP L V EY
Sbjct: 88 MKRLRHPNIVLFMGAVT--QPPNLSIVTEY 115
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 132 QSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKPSLCPRDIYD 191
+S+V+SF V LWE+ +L +P+ +L QV+ A + L++ P+ +L P+ +
Sbjct: 219 KSDVYSFGVILWELATL--QQPWGNLNPAQVV--AAVGFKCKRLEI--PR-NLNPQ-VAA 270
Query: 192 LMCDCWKRDQTMRPTFKQIYSFMK 215
++ CW + RP+F I ++
Sbjct: 271 IIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 36 LERLGSCHLGE-MMICETED------IELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVS 88
L+++G G+ +++ TED E++ +++ + R +S RE+ L++++ PN+V
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKE-REESRREVAVLANMKHPNIVQ 87
Query: 89 ILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDR 128
++VM+Y + GDL + +N+ + D+
Sbjct: 88 YRESFEENGSLYIVMDY-CEGGDLFKRINAQKGVLFQEDQ 126
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 71 SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
+LREIR L L+ PNLV++L V ++ LV EY
Sbjct: 49 ALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83
>pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
pdb|2BHW|B Chain B, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
pdb|2BHW|C Chain C, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
Length = 232
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 84 PNLVSILGVCTGEQPPWLVMEYPAQLG-DLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
P+ V LG +GE P +L E+P G D + +++R+ S
Sbjct: 19 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSR-------- 70
Query: 143 WEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
W +L FP L + ++ E +++ Q+F
Sbjct: 71 WAMLG-ALGSVFPELLSRNGVKFGEAVWFKAGSQIF 105
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
I + I LD E + + ++REI L L PN+VS++ V E+ LV E+
Sbjct: 47 IVALKRIRLDAEDEGIPST---AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 49 ICETEDIELDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
I + I LD E + + ++REI L L PN+VS++ V E+ LV E+
Sbjct: 47 IVALKRIRLDAEDEGIPST---AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEF 100
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P+ +I + L D W
Sbjct: 172 NEFKNIFGTPAFVAPEIVNYEPLGLEADMW 201
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 59/159 (37%), Gaps = 33/159 (20%)
Query: 2 APPVVQWN----ISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGEM--MICETEDI 55
PPV Q+ + P MG + R+ +++G E+ C + +
Sbjct: 10 GPPVPQFQPQKALRPDMGYNTLAN-----------FRIEKKIGRGQFSEVYRAACLLDGV 58
Query: 56 ELDTEKVAV-----RTCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLG 110
+ +KV + R D ++EI L L PN++ + +V+E A G
Sbjct: 59 PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLEL-ADAG 117
Query: 111 DL---VQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEIL 146
DL ++H L +R VW + V L L
Sbjct: 118 DLSRMIKHFKKQKRLIPER-------TVWKYFVQLCSAL 149
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|3L12|A Chain A, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (Yp_165505.1) From Silicibacter
Pomeroyi Dss-3 At 1.60 A Resolution
pdb|3L12|B Chain B, Crystal Structure Of Putative Glycerophosphoryl Diester
Phosphodiesterase (Yp_165505.1) From Silicibacter
Pomeroyi Dss-3 At 1.60 A Resolution
Length = 313
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 57 LDTEKVAVRTCRGDSLREIRFLSSLQDPNLVSILGVCT--GEQPPWLVMEY---PAQLGD 111
LD + RT G + FL+ + P L +L +C G+Q P+L++E PA D
Sbjct: 100 LDVGGLDGRTVYGRRFPDQAFLTGIHVPRLGELLDLCAGYGDQAPYLLLELKSDPALXHD 159
Query: 112 LVQHLNSADNLTRDRDRYTCQSNVWSFAVTLWEILSLCR----DKPFPHLTNEQVIQNAE 167
+ D RY + + W +L CR D P +L+ Q+ +NA+
Sbjct: 160 HAARAEXVAAVLADVRRYRXEPRTVXHSFD-WALLGECRRQAPDLPTSYLS--QLPENAD 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 118 SADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV 177
+ + + + + YT +++ +SFA+ L+ IL+ + PF + ++ +M L+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKI--KFINMIREEGLRP 249
Query: 178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
+P+ CP + +++ CW D RP F I
Sbjct: 250 TIPED--CPPRLRNVIELCWSGDPKKRPHFSYI 280
Score = 30.8 bits (68), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+ +S+L PN+V + G+ PP +VME+ GDL L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF-VPCGDLYHRL 112
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 118 SADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV 177
+ + + + + YT +++ +SFA+ L+ IL+ + PF + ++ +M L+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKI--KFINMIREEGLRP 249
Query: 178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
+P+ CP + +++ CW D RP F I
Sbjct: 250 TIPED--CPPRLRNVIELCWSGDPKKRPHFSYI 280
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+ +S+L PN+V + G+ PP +VME+ GDL L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF-VPCGDLYHRL 112
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 118 SADNLTRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQV 177
+ + + + + YT +++ +SFA+ L+ IL+ + PF + ++ +M L+
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILT--GEGPFDEYSYGKI--KFINMIREEGLRP 249
Query: 178 FLPKPSLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
+P+ CP + +++ CW D RP F I
Sbjct: 250 TIPED--CPPRLRNVIELCWSGDPKKRPHFSYI 280
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+ +S+L PN+V + G+ PP +VME+ GDL L
Sbjct: 72 REVFIMSNLNHPNIVKLYGLM--HNPPRMVMEF-VPCGDLYHRL 112
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 22/149 (14%)
Query: 67 CRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDR 126
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEEE 114
Query: 127 DR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYGG 173
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFGN 171
Query: 174 ELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 22/150 (14%)
Query: 66 TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRD 125
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEE 114
Query: 126 RDR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYG 172
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFG 171
Query: 173 GELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 NEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 22/149 (14%)
Query: 67 CRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDR 126
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEEE 114
Query: 127 DR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYGG 173
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFGN 171
Query: 174 ELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 22/149 (14%)
Query: 67 CRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDR 126
R D RE+ L +Q PN++++ V + L++E A G+L L ++LT +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAG-GELFDFLAEKESLTEEE 115
Query: 127 DR-----------YTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQN--AEHMYYGG 173
Y + F + I+ L R+ P P + ++I A + +G
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI---KIIDFGLAHKIDFGN 172
Query: 174 ELQVFLPKPSLCPRDIYD-----LMCDCW 197
E + P +I + L D W
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 72 LREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
RE+R L PN+V + V E+ +LV EY A G++ +L
Sbjct: 61 FREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEY-ASGGEVFDYL 104
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 123 TRDRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVFLPKP 182
+ R Y +S+VWS +TL+E+ + FP+ V + G Q+ +
Sbjct: 200 SASRQGYDVRSDVWSLGITLYELAT----GRFPYPKWNSVFDQLTQVVKGDPPQLSNSEE 255
Query: 183 SLCPRDIYDLMCDCWKRDQTMRPTFKQI 210
+ + C +D++ RP +K++
Sbjct: 256 REFSPSFINFVNLCLTKDESKRPKYKEL 283
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 71 SLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYT 130
++RE+ L L+ N+V++ + E+ LV EY + DL Q+L+ N+
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK--DLKQYLDDCGNIIN------ 98
Query: 131 CQSNVWSFAVTLWEILSLCRDKPFPH 156
NV F L L+ C + H
Sbjct: 99 -MHNVKLFLFQLLRGLAYCHRQKVLH 123
>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
Protein Complex From Pea Thylakoid Membranes
Length = 232
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Query: 84 PNLVSILGVCTGEQPPWLVMEYPAQLG-DLVQHLNSADNLTRDRDRYTCQSNVWSFAVTL 142
P+ V LG +GE P +L E+P G D + +++R+ S
Sbjct: 19 PDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSR-------- 70
Query: 143 WEILSLCRDKPFPHLTNEQVIQNAEHMYYGGELQVF 178
W +L FP L + ++ E +++ Q+F
Sbjct: 71 WAMLG-ALGCVFPELLSRNGVKFGEAVWFKAGSQIF 105
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
REI +L L+ P+++ + V T +V+EY G+L ++ +T D R Q
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG--GELFDYIVEKKRMTEDEGRRFFQ 115
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 18/97 (18%)
Query: 125 DRDRYTCQSNVWSFAVTLWEILSLCRDKPFPHLTNEQVI-QNAEHMYYGGELQVFLPKPS 183
D+ ++ S+V++ T+W L R+ PF E +I Q M KP+
Sbjct: 216 DKLPFSKHSDVFALG-TIWYELH-AREWPFKTQPAEAIIWQMGTGM-----------KPN 262
Query: 184 LC----PRDIYDLMCDCWKRDQTMRPTFKQIYSFMKR 216
L ++I D++ CW +Q RPTF ++ +++
Sbjct: 263 LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 38 RLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR--------EIRFLSSLQDPNLVSI 89
+LGS G++ + E L+ ++T D + EI L SL PN++ I
Sbjct: 29 KLGSGAFGDVHLVEERSSGLER---VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 90 LGVCTGEQPPWLVMEYPAQLGDLVQHLNSA 119
V ++VME + G+L++ + SA
Sbjct: 86 FEVFEDYHNMYIVME-TCEGGELLERIVSA 114
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKKVIH 131
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 111
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 112 --TATYITELANALSYCHSKRVIH 133
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 74 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 126
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 127 --TATYITELANALSYCHSKRVIH 148
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 114
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 115 --TATYITELANALSYCHSKRVIH 136
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 114
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 115 --TATYITELANALSYCHSKRVIH 136
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 110
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 111 --TATYITELANALSYCHSKRVIH 132
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 110
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 111 --TATYITELANALSYCHSKRVIH 132
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 111
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 112 --TATYITELANALSYCHSKRVIH 133
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 114
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 115 --TATYITELANALSYCHSKRVIH 136
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 110
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 111 --TATYITELANALSYCHSKRVIH 132
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 113
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 114 --TATYITELANALSYCHSKRVIH 135
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 108
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 109 --TATYITELANALSYCHSKRVIH 130
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 135
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 136 --TATYITELANALSYCHSKRVIH 157
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 106
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 107 --TATYITELANALSYCHSKRVIH 128
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|4AFY|A Chain A, Crystal Structure Of The Fimx Eal Domain In Complex With
Reaction Product Pgpg
pdb|4AFY|B Chain B, Crystal Structure Of The Fimx Eal Domain In Complex With
Reaction Product Pgpg
pdb|4AG0|A Chain A, Crystal Structure Of Fimx Eal Domain
pdb|4AG0|B Chain B, Crystal Structure Of Fimx Eal Domain
Length = 274
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 79 SSLQDPNLVSILGVC--TGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
+SLQDP L+ LGV PP ++ + D +L A LT+ CQ+ +
Sbjct: 120 ASLQDPGLLPWLGVALKAARLPPESLV-FQISEADATSYLKQAKQLTQGLATLHCQAAIS 178
Query: 137 SFAVTL 142
F +L
Sbjct: 179 QFGCSL 184
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 109
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 110 --TATYITELANALSYCHSKRVIH 131
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L L+R ++ T
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQ---KLSRFDEQRTA- 115
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 116 ----TYITELANALSYCHSKRVIH 135
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 83 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 135
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 136 --TATYITELANALSYCHSKRVIH 157
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L L+R ++ T
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQ---KLSRFDEQRTA- 115
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 116 ----TYITELANALSYCHSKRVIH 135
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A LG + + L R
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APLGTVYRELQKLSKFDEQR------ 112
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 113 --TATYITELANALSYCHSKRVIH 134
>pdb|3HV8|A Chain A, Crystal Structure Of Fimx Eal Domain From Pseudomonas
Aeruginosa Bound To C-Di-Gmp
Length = 268
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 79 SSLQDPNLVSILGVC--TGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
+SLQDP L+ LGV PP ++ + D +L A LT+ CQ+ +
Sbjct: 114 ASLQDPGLLPWLGVALKAARLPPESLV-FQISEADATSYLKQAKQLTQGLATLHCQAAIS 172
Query: 137 SFAVTL 142
F +L
Sbjct: 173 QFGCSL 178
>pdb|3HV9|A Chain A, Crystal Structure Of Fimx Eal Domain From Pseudomonas
Aeruginosa
Length = 265
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 79 SSLQDPNLVSILGVC--TGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
+SLQDP L+ LGV PP ++ + D +L A LT+ CQ+ +
Sbjct: 111 ASLQDPGLLPWLGVALKAARLPPESLV-FQISEADATSYLKQAKQLTQGLATLHCQAAIS 169
Query: 137 SFAVTL 142
F +L
Sbjct: 170 QFGCSL 175
>pdb|4J40|A Chain A, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
pdb|4J40|B Chain B, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
Length = 437
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 79 SSLQDPNLVSILGVC--TGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQSNVW 136
+SLQDP L+ LGV PP ++ + D +L A LT+ CQ+ +
Sbjct: 283 ASLQDPGLLPWLGVALKAARLPPESLV-FQISEADATSYLKQAKQLTQGLATLHCQAAIS 341
Query: 137 SFAVTL 142
F +L
Sbjct: 342 QFGCSL 347
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 36 LERLGSCHLGEMMICETEDIELD-----TEKVAVRTCRGDSL-REIRFLSSLQDPNLVSI 89
+++LGS GE+++C + ++ K +V T L E+ L L PN++ +
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 90 LGVCTGEQPPWLVME 104
++ +LVME
Sbjct: 102 YDFFEDKRNYYLVME 116
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A G++ + L R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQR------ 114
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 115 --TATYITELANALSYCHSKRVIH 136
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 73 REIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSADNLTRDRDRYTCQ 132
RE+ S L+ PN++ + G +L++EY A G++ + L R
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQR------ 114
Query: 133 SNVWSFAVTLWEILSLCRDKPFPH 156
++ L LS C K H
Sbjct: 115 --TATYITELANALSYCHSKRVIH 136
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 EKVAVR--------TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY--PAQL 109
EKVA++ T + L+EI+ +S PN+VS + WLVM+ +
Sbjct: 36 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 95
Query: 110 GDLVQHL 116
D+++H+
Sbjct: 96 LDIIKHI 102
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 60 EKVAVR--------TCRGDSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY--PAQL 109
EKVA++ T + L+EI+ +S PN+VS + WLVM+ +
Sbjct: 41 EKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV 100
Query: 110 GDLVQHL 116
D+++H+
Sbjct: 101 LDIIKHI 107
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR----EIRFLSSLQDP 84
P ++ LG G++ + ++ + + T + L EI L+S P
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 85 NLVSILGVCTGEQPPWLVMEY 105
N+V +L E W+++E+
Sbjct: 95 NIVKLLDAFYYENNLWILIEF 115
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR----EIRFLSSLQDP 84
P ++ LG G++ + ++ + + T + L EI L+S P
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 85 NLVSILGVCTGEQPPWLVMEY 105
N+V +L E W+++E+
Sbjct: 95 NIVKLLDAFYYENNLWILIEF 115
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 29 PRYCLRVLERLGSCHLGEMMICETEDIELDTEKVAVRTCRGDSLR----EIRFLSSLQDP 84
P ++ LG G++ + ++ + + T + L EI L+S P
Sbjct: 35 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHP 94
Query: 85 NLVSILGVCTGEQPPWLVMEY 105
N+V +L E W+++E+
Sbjct: 95 NIVKLLDAFYYENNLWILIEF 115
>pdb|2WZK|A Chain A, Structure Of The Cul5 N-Terminal Domain At 2.05a
Resolution
Length = 391
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 71/183 (38%), Gaps = 23/183 (12%)
Query: 2 APPVVQWNISPSMGQSYKCREGDVVPIPRYCLRVLERLGSCHLGE-MMICETEDIELDTE 60
AP +Q N + K + + + LR LE C+ E +M C + +
Sbjct: 218 APSYLQQN---GVQNYMKYADAKLKEEEKRALRYLETRRECNSVEALMECCVNALVTSFK 274
Query: 61 KVAVRTCRG----DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHL 116
+ + C+G + ++ + SL D V G +P +E L +
Sbjct: 275 ETILAECQGMIKRNETEKLHLMFSLMDK-------VPNGIEPMLKDLEEHIISAGLADMV 327
Query: 117 NSADNLTRDRDRYTCQSNVW--SFAVTLWEILS------LCRDKPFPHLTNEQVIQNAEH 168
+A+ +T D ++Y Q + F+ + E RDK + + N+ I AE+
Sbjct: 328 AAAETITTDSEKYREQLDTLFNRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKAEN 387
Query: 169 MYY 171
+Y+
Sbjct: 388 LYF 390
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
LS + P+LVS++G C L+ +Y + G+L +HL +D
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKY-MENGNLKRHLYGSD 130
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 78 LSSLQDPNLVSILGVCTGEQPPWLVMEYPAQLGDLVQHLNSAD 120
LS + P+LVS++G C L+ +Y + G+L +HL +D
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKY-MENGNLKRHLYGSD 130
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 70 DSLREIRFLSSLQDPNLVSILGVCTGEQPPWLVMEY 105
D + EI L+S PN+V +L E W+++E+
Sbjct: 53 DYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 88
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,086,190
Number of Sequences: 62578
Number of extensions: 279527
Number of successful extensions: 1685
Number of sequences better than 100.0: 470
Number of HSP's better than 100.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 673
Number of HSP's gapped (non-prelim): 749
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)