BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7968
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8WZM0|GCN5_YARLI Histone acetyltransferase GCN5 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GCN5 PE=3 SV=1
Length = 464
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 18 EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
+ VPDY+ +I +PMD T++ +L Y+ E ++D LVF+NC AYN E + Y+
Sbjct: 384 DEVPDYYEVIKEPMDLSTMEQRLEADSYKTMEEFVYDARLVFNNCRAYNNETTTYYKNAN 443
Query: 78 KLNTFL 83
KL F+
Sbjct: 444 KLEKFM 449
>sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens
GN=BAZ2B PE=1 SV=3
Length = 2168
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
VP Y ++I KPMDF TI+ KL+ QY N D LVFDNC +N++DS+I
Sbjct: 2094 VPGYKKVIKKPMDFSTIREKLSSGQYPNLETFALDVRLVFDNCETFNEDDSDI 2146
>sp|Q9DE13|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus
gallus GN=BAZ2B PE=2 SV=1
Length = 2130
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
VP Y ++I KPMDF TI+ KL QY N D LVFDNC +N++DS+I
Sbjct: 2056 VPGYKKVIKKPMDFSTIRDKLTSGQYPNVEAFSLDVRLVFDNCETFNEDDSDI 2108
>sp|Q8K2F0|BRD3_MOUSE Bromodomain-containing protein 3 OS=Mus musculus GN=Brd3 PE=1 SV=2
Length = 726
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II PMD GTIK +L Y + SE + D N +F NC+ YNK +I
Sbjct: 69 LPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDI 121
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K++ +Y + D L+F NC+ YN D E+ KL
Sbjct: 346 DYHDIIKHPMDLSTVKRKMDSREYPDAQGFAADIRLMFSNCYKYNPPDHEVVAMARKL 403
>sp|Q15059|BRD3_HUMAN Bromodomain-containing protein 3 OS=Homo sapiens GN=BRD3 PE=1 SV=1
Length = 726
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II PMD GTIK +L Y + SE + D N +F NC+ YNK +I
Sbjct: 70 LPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDI 122
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K++ +Y + D L+F NC+ YN D E+ KL
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKL 404
>sp|Q6MGA9|BRD2_RAT Bromodomain-containing protein 2 OS=Rattus norvegicus GN=Brd2 PE=2
SV=1
Length = 798
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDI 161
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K+ YR+ E D L+F NC+ YN D ++ KL
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 441
>sp|Q7JJ13|BRD2_MOUSE Bromodomain-containing protein 2 OS=Mus musculus GN=Brd2 PE=1 SV=1
Length = 798
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 109 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDI 161
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K+ YR+ E D L+F NC+ YN D ++ KL
Sbjct: 384 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 441
>sp|P25440|BRD2_HUMAN Bromodomain-containing protein 2 OS=Homo sapiens GN=BRD2 PE=1 SV=2
Length = 801
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDI 162
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K+ YR+ E D L+F NC+ YN D ++ KL
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
>sp|Q5TJG6|BRD2_CANFA Bromodomain-containing protein 2 OS=Canis familiaris GN=BRD2 PE=3
SV=1
Length = 803
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDI 162
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K+ YR+ E D L+F NC+ YN D ++ KL
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
>sp|Q32S26|BRD2_BOVIN Bromodomain-containing protein 2 OS=Bos taurus GN=BRD2 PE=3 SV=1
Length = 803
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 110 LPDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKPTDDI 162
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II PMD T+K K+ YR+ E D L+F NC+ YN D ++ KL
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKL 442
>sp|P13709|FSH_DROME Homeotic protein female sterile OS=Drosophila melanogaster
GN=fs(1)h PE=1 SV=2
Length = 2038
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDYH+II +PMD GTIK +L Y + E + D N +F+NC+ YNK ++
Sbjct: 70 LPDYHKIIKQPMDMGTIKKRLENNYYWSAKETIQDFNTMFNNCYVYNKPGEDV 122
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
DYH II KPMD GT+K K++ +Y++ E D L+F NC+ YN D ++
Sbjct: 516 DYHDIIKKPMDLGTVKRKMDNREYKSAPEFAADVRLIFTNCYKYNPPDHDV 566
>sp|Q9Y7N0|BDF1_SCHPO SWR1 complex bromodomain subunit bdf1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bdf1 PE=1 SV=1
Length = 578
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 7 EETASSATFSV------EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFD 60
+ T +SA F V + +PDY I+ PMD GTI+ KL ++Y E + D NL+F
Sbjct: 101 KRTKNSAPFKVPVDPIKQNIPDYPTIVKNPMDLGTIEKKLTSYEYSVPQEFIDDMNLMFS 160
Query: 61 NCFAYNKEDSEI 72
NCF YN +S +
Sbjct: 161 NCFLYNGTESPV 172
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 17 VEPV----PDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
V+PV PDY +I +PMD TI+ KLN +Y E D L+F+NCF YN + +
Sbjct: 283 VDPVACDCPDYFDVIKEPMDLSTIQSKLNKNEYSTLEEFESDILLMFNNCFTYNPPGTPV 342
Query: 73 Y 73
+
Sbjct: 343 H 343
>sp|Q84XV2|GTE1_ARATH Transcription factor GTE1 OS=Arabidopsis thaliana GN=GTE1 PE=2 SV=1
Length = 386
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIY 73
DY+++I KPMD GTIK K+ +Y N E+ D LVF N YN+E ++Y
Sbjct: 143 DYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVY 194
>sp|Q6CXW4|GCN5_KLULA Histone acetyltransferase GCN5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GCN5 PE=3 SV=1
Length = 516
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 18 EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
E VPDY+ I +PMD +++ KLN +Y ++D L+F+NC AYN E++ ++
Sbjct: 436 EEVPDYYEFIKEPMDLSSMEMKLNGNRYEKMENFIYDARLIFNNCRAYNGENTSYFKYAN 495
Query: 78 KLNTFLS 84
+L F +
Sbjct: 496 RLEKFFN 502
>sp|P34545|CBP1_CAEEL Protein cbp-1 OS=Caenorhabditis elegans GN=cbp-1 PE=2 SV=6
Length = 2017
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDYH II +PMD T+ KL QY+N + D L+ DN + YN+++S++Y+ +KL
Sbjct: 900 IPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWLYNRKNSKVYKYGLKL 959
Query: 80 N 80
+
Sbjct: 960 S 960
>sp|Q03330|GCN5_YEAST Histone acetyltransferase GCN5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GCN5 PE=1 SV=1
Length = 439
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 18 EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
E VPDY+ I +PMD T++ KL +Y+ + ++D LVF+NC YN E++ Y+
Sbjct: 359 EEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVFNNCRMYNGENTSYYKYAN 418
Query: 78 KLNTFLS 84
+L F +
Sbjct: 419 RLEKFFN 425
>sp|Q9ESU6|BRD4_MOUSE Bromodomain-containing protein 4 OS=Mus musculus GN=Brd4 PE=1 SV=1
Length = 1400
Score = 56.6 bits (135), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY++II PMD GTIK +L Y N E + D N +F NC+ YNK +I
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDI 146
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DY II PMD TIK KL +YR+ E D L+F NC+ YN D E+ KL
Sbjct: 390 DYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 447
>sp|O60885|BRD4_HUMAN Bromodomain-containing protein 4 OS=Homo sapiens GN=BRD4 PE=1 SV=2
Length = 1362
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY++II PMD GTIK +L Y N E + D N +F NC+ YNK +I
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDI 146
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DY II PMD TIK KL +YR+ E D L+F NC+ YN D E+ KL
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKL 446
>sp|Q756G9|GCN5_ASHGO Histone acetyltransferase GCN5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GCN5
PE=3 SV=1
Length = 452
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 18 EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
+ VPDY+ I +PMD T++ KL +Y + ++D L+F+NC AYN E++ ++
Sbjct: 372 DEVPDYYEFIKEPMDLSTMEIKLENNRYEKMEDFIYDARLIFNNCRAYNGENTSYFKYAN 431
Query: 78 KLNTFLS 84
+L F +
Sbjct: 432 RLEKFFN 438
>sp|Q9ULD4|BRPF3_HUMAN Bromodomain and PHD finger-containing protein 3 OS=Homo sapiens
GN=BRPF3 PE=1 SV=2
Length = 1205
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 16 SVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEP 75
++ VPDY I KPMDF T++ KL YR E D NL+ NC YN +D+ +
Sbjct: 619 NLSEVPDYLEFISKPMDFSTMRRKLESHLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRA 678
Query: 76 TIKL 79
++L
Sbjct: 679 AVRL 682
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 16 SVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEP 75
S++ VPDY I PMDF T++ +L Y+N E D +L+ DNC YN D+ Y
Sbjct: 592 SLKEVPDYLDHIKHPMDFATMRKRLEAQGYKNLHEFEEDFDLIIDNCMKYNARDTVFYRA 651
Query: 76 TIKL 79
++L
Sbjct: 652 AVRL 655
>sp|P55201|BRPF1_HUMAN Peregrin OS=Homo sapiens GN=BRPF1 PE=1 SV=2
Length = 1214
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
VPDY I KPMDF T+K L ++Y N + D NL+ NC YN +D+ Y ++L
Sbjct: 662 VPDYLDHIKKPMDFFTMKQNLEAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRL 721
>sp|Q6FTW5|GCN5_CANGA Histone acetyltransferase GCN5 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GCN5 PE=3 SV=1
Length = 546
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 18 EPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
E VPDY+ I +PMD T++ KL +Y E ++D LV +NC YN E++ Y+
Sbjct: 466 EEVPDYYEFIKEPMDLSTMELKLENNKYEKMEEFIYDARLVCNNCRLYNGENTSYYKYAN 525
Query: 78 KLNTFLS 84
+L F +
Sbjct: 526 RLEKFFN 532
>sp|Q93ZB7|GTE11_ARATH Transcription factor GTE11 OS=Arabidopsis thaliana GN=GTE11 PE=1
SV=1
Length = 620
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY II PMD GT+K KL Y + SE D L F N YN D+ +Y L
Sbjct: 160 IPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVYRFADTL 219
Query: 80 NTFL 83
+ F
Sbjct: 220 SKFF 223
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
VPDY+ II KP+ I+ K+N +Y+ SE + D L+F NCF YN ++ + +L
Sbjct: 1462 VPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRL 1521
Query: 80 NTFL 83
F
Sbjct: 1522 QAFF 1525
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 20 VPDYHRIIGKPMDFGTIKHKL--NMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
VPDY++II PMD TIK +L + Y + + D L+F NC +N+ DSE+ I
Sbjct: 933 VPDYYKIIKNPMDLSTIKKRLQEDYCMYTKPEDFVADFRLIFQNCAEFNEPDSEVANAGI 992
Query: 78 KLNTFLSCL 86
KL ++ L
Sbjct: 993 KLESYFEEL 1001
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 20 VPDYHRIIGKPMDFGTIKHKL--NMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTI 77
VPDY++II PMD TIK +L + Y + + D L+F NC +N+ DSE+ I
Sbjct: 932 VPDYYKIIKNPMDLSTIKKRLQEDYSMYSKPEDFVADFRLIFQNCAEFNEPDSEVANAGI 991
Query: 78 KLNTFLSCL 86
KL + L
Sbjct: 992 KLENYFEEL 1000
>sp|Q91Y44|BRDT_MOUSE Bromodomain testis-specific protein OS=Mus musculus GN=Brdt PE=1
SV=3
Length = 956
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY+ II PMD TIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 62 LPDYYTIIKTPMDLNTIKKRLENKYYEKASECIEDFNTMFSNCYLYNKTGDDI 114
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+Y+ ++ PMD GTIK K++ +Y++ E D L+F NC+ YN D E+
Sbjct: 307 NYYDVVKNPMDLGTIKGKMDNQEYKDAYEFAADVRLMFMNCYKYNPPDHEV 357
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
VPDY+ II KP+ I+ K+N +Y+ SE + D L+F NCF YN ++ + +L
Sbjct: 1463 VPDYYDIIKKPIALNIIREKVNKCEYKLASEFIDDIELMFSNCFEYNPRNTSEAKAGTRL 1522
Query: 80 NTFL 83
F
Sbjct: 1523 QAFF 1526
>sp|Q9UUK2|GCN5_SCHPO Histone acetyltransferase gcn5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gcn5 PE=1 SV=1
Length = 454
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 16 SVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEP 75
S E VPDY+ +I PMD T++ +L QY + E + D +FDNC +YN ++ Y+
Sbjct: 373 SKEDVPDYYEVIEHPMDLSTMEFRLRNNQYESVEEFIRDAKYIFDNCRSYNDSNTTYYKN 432
Query: 76 TIKLNTF 82
+L F
Sbjct: 433 ADRLEKF 439
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 16 SVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEP 75
S VPDY +I +P+ I+ K+N +Y+ SE + D +L++ NCF YN +S +
Sbjct: 531 SKNQVPDYFDVIQRPIALNLIREKVNKCEYKCASEFIDDVHLMWSNCFEYNHHNSNEAKA 590
Query: 76 TIKLNTFL 83
I+L +F
Sbjct: 591 GIRLQSFF 598
>sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens
GN=BAZ2A PE=1 SV=4
Length = 1905
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
V Y RII PMDF T++ +L Y ++ E D LVFDNC +N++DSE+
Sbjct: 1827 VSGYRRIIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEV 1879
>sp|B2RWS6|EP300_MOUSE Histone acetyltransferase p300 OS=Mus musculus GN=Ep300 PE=1 SV=1
Length = 2415
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY I+ PMD TIK KL+ QY+ + + D L+F+N + YN++ S +Y+ KL
Sbjct: 1085 IPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYIDDIWLMFNNAWLYNRKTSRVYKYCSKL 1144
Query: 80 N 80
+
Sbjct: 1145 S 1145
>sp|D4A7T3|BRDT_RAT Bromodomain testis-specific protein OS=Rattus norvegicus GN=Brdt
PE=1 SV=1
Length = 952
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY+ II PMD TIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 62 LPDYYTIIETPMDLSTIKKRLENRYYEKASECVGDFNTMFSNCYLYNKPGDDI 114
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+Y+ I+ PMD GTIK K++ +Y++ E D L+F NC+ YN D E+
Sbjct: 307 NYYDIVKNPMDLGTIKGKMDKQEYKDACEFAADVRLMFMNCYKYNPPDHEV 357
>sp|Q09472|EP300_HUMAN Histone acetyltransferase p300 OS=Homo sapiens GN=EP300 PE=1 SV=2
Length = 2414
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY I+ PMD TIK KL+ QY+ + + D L+F+N + YN++ S +Y+ KL
Sbjct: 1086 IPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLYNRKTSRVYKYCSKL 1145
Query: 80 N 80
+
Sbjct: 1146 S 1146
>sp|Q91YE5|BAZ2A_MOUSE Bromodomain adjacent to zinc finger domain protein 2A OS=Mus musculus
GN=Baz2a PE=1 SV=2
Length = 1889
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
V Y R+I PMDF T++ +L Y ++ E D LVFDNC +N++DSE+
Sbjct: 1811 VSGYRRVIKNPMDFSTMRERLLRGGYTSSEEFAADALLVFDNCQTFNEDDSEV 1863
>sp|Q92793|CBP_HUMAN CREB-binding protein OS=Homo sapiens GN=CREBBP PE=1 SV=3
Length = 2442
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY I+ PMD TIK KL+ QY+ + + D L+F+N + YN++ S +Y+ KL
Sbjct: 1122 IPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1181
>sp|Q6JHU9|CBP_RAT CREB-binding protein OS=Rattus norvegicus GN=Crebbp PE=2 SV=1
Length = 2442
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY I+ PMD TIK KL+ QY+ + + D L+F+N + YN++ S +Y+ KL
Sbjct: 1123 IPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1182
>sp|P45481|CBP_MOUSE CREB-binding protein OS=Mus musculus GN=Crebbp PE=1 SV=3
Length = 2441
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
+PDY I+ PMD TIK KL+ QY+ + + D L+F+N + YN++ S +Y+ KL
Sbjct: 1123 IPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKL 1182
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
VP Y +II PMDF T++HKL Y E D L+F NC +N+++S++ + + L
Sbjct: 1619 VPGYRKIIKNPMDFSTMRHKLLNGNYSRCEEFAEDAELIFSNCQLFNEDESDVGKAGLIL 1678
Query: 80 NTF 82
F
Sbjct: 1679 KKF 1681
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 17 VEPV-----PDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSE 71
+EPV PDY+ +I +PMD T++ ++ Y +E + D +FDNC YN DS
Sbjct: 2953 LEPVDPNDAPDYYGVIKEPMDLATMEERVQRRYYEKLTEFVADMTKIFDNCRYYNPSDSP 3012
Query: 72 IYEPTIKLNTFL 83
Y+ L +F
Sbjct: 3013 FYQCAEVLESFF 3024
>sp|Q9LXA7|GTE2_ARATH Transcription factor GTE2 OS=Arabidopsis thaliana GN=GTE2 PE=2 SV=2
Length = 581
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIY 73
DYHRI+ KPMD GT+K L YR+ + D L F N +YN + ++Y
Sbjct: 207 DYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNAMSYNPKGQDVY 258
>sp|Q6BGW1|GCN5_DEBHA Histone acetyltransferase GCN5 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GCN5 PE=3 SV=2
Length = 455
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 12 SATFSVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSE 71
S + E V DY+ +I +PMD T++ KL +Y + + L+D L+F+NC +YN + +
Sbjct: 368 STPVNKEEVGDYYDVIKEPMDLSTMESKLENDKYDSFDQFLYDARLIFNNCRSYNADSTT 427
Query: 72 IYEPTIKLNTFLS 84
++ KL F++
Sbjct: 428 YFKNATKLEKFMN 440
>sp|Q4R8Y1|BRDT_MACFA Bromodomain testis-specific protein OS=Macaca fascicularis GN=BRDT
PE=2 SV=3
Length = 947
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY+ II PMD TIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENKYYVKASECIEDFNTMFSNCYLYNKPGDDI 115
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+Y+ I+ PMD GTIK K++ +Y++ + D L+F NC+ YN D E+
Sbjct: 308 NYYDIVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEV 358
>sp|P35177|SPT7_YEAST Transcriptional activator SPT7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SPT7 PE=1 SV=1
Length = 1332
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 16 SVEPVPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDS 70
S P+YH+II K MD T+ KL FQY + E + D L++ NC YN + S
Sbjct: 471 SKREAPNYHQIIKKSMDLNTVLKKLKSFQYDSKQEFVDDIMLIWKNCLTYNSDPS 525
>sp|Q07442|BDF2_YEAST Bromodomain-containing factor 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BDF2 PE=1 SV=1
Length = 638
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 17 VEPV----PDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
V+P+ P+Y ++ PMD GTI + L ++Y+ + + D NLVF NCF +N E +E+
Sbjct: 349 VDPIALNLPNYFDVVKNPMDLGTISNNLMNWKYKTIDQFVDDLNLVFYNCFQFNPEGNEV 408
Query: 73 YEPTIKL 79
+ KL
Sbjct: 409 HSMGKKL 415
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+P Y + PMD I+ KL Y + +V D + DNC +N +S I
Sbjct: 169 IPHYFNYVQTPMDLSLIETKLQGNVYHSVEQVTSDFKTMVDNCLNFNGPESSI 221
>sp|Q58F21|BRDT_HUMAN Bromodomain testis-specific protein OS=Homo sapiens GN=BRDT PE=1
SV=4
Length = 947
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY+ II PMD TIK +L Y SE + D N +F NC+ YNK +I
Sbjct: 63 LPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDI 115
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+Y+ ++ PMD GTIK K++ +Y++ + D L+F NC+ YN D E+
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEV 358
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 17 VEPV-----PDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSE 71
+EPV PDY+++I +PMD ++ KL Y SE + D +FDNC YN ++S
Sbjct: 2582 MEPVDPKEAPDYYKVIKEPMDLKRMEIKLESNTYTKLSEFIGDMTKIFDNCRYYNPKESS 2641
Query: 72 IYEPTIKLNTFL 83
Y+ L ++
Sbjct: 2642 FYKCAEALESYF 2653
>sp|Q9FT54|GTE6_ARATH Transcription factor GTE6 OS=Arabidopsis thaliana GN=GTE6 PE=2 SV=1
Length = 369
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQ---YRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIK 78
DY +I KPMDF TIK+++ Y++ ++ D LVF+N YN+E S++Y K
Sbjct: 127 DYFEVIDKPMDFSTIKNQMEAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKK 186
Query: 79 L 79
L
Sbjct: 187 L 187
>sp|F1QW93|BRDT_DANRE Bromodomain testis-specific protein OS=Danio rerio GN=brdt PE=2
SV=2
Length = 918
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 22 DYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEIYEPTIKL 79
DYH II +PMD TIK K+ +Y + + D L+F NC+ YN E+ KL
Sbjct: 308 DYHEIIHQPMDMSTIKKKMEAREYTDALQFAADMRLMFSNCYKYNPPGHEVVSMARKL 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 20 VPDYHRIIGKPMDFGTIKHKLNMFQYRNNSEVLFDCNLVFDNCFAYNKEDSEI 72
+PDY+ II PMD TI+ +L Y E + D N +F NC+ YN+ +I
Sbjct: 65 LPDYYTIIKNPMDLTTIRKRLENNYYWKAMECVEDFNTMFTNCYVYNRPGDDI 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,749,854
Number of Sequences: 539616
Number of extensions: 1275630
Number of successful extensions: 2332
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2134
Number of HSP's gapped (non-prelim): 193
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)