Query psy7970
Match_columns 290
No_of_seqs 371 out of 1902
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 23:31:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ap4_A E3 ubiquitin ligase RNF 99.4 5.9E-14 2E-18 112.8 2.0 97 126-287 8-127 (133)
2 2ea5_A Cell growth regulator w 99.4 4.4E-13 1.5E-17 97.0 4.9 54 73-126 10-63 (68)
3 4ic3_A E3 ubiquitin-protein li 99.3 1.3E-12 4.5E-17 95.8 2.8 57 234-290 14-72 (74)
4 4ap4_A E3 ubiquitin ligase RNF 99.2 3E-12 1E-16 102.7 3.9 92 76-169 5-126 (133)
5 2yho_A E3 ubiquitin-protein li 99.2 1.9E-12 6.4E-17 96.4 1.7 58 233-290 7-66 (79)
6 2ecg_A Baculoviral IAP repeat- 99.2 4E-12 1.4E-16 93.4 3.0 55 236-290 17-73 (75)
7 2vje_B MDM4 protein; proto-onc 99.2 2.4E-12 8.1E-17 91.7 1.3 52 75-126 4-61 (63)
8 2vje_A E3 ubiquitin-protein li 99.1 5.7E-12 2E-16 90.0 1.1 52 75-126 5-62 (64)
9 2yho_A E3 ubiquitin-protein li 99.1 2.1E-11 7.2E-16 90.7 2.0 50 77-126 17-66 (79)
10 2ea5_A Cell growth regulator w 99.1 4.7E-11 1.6E-15 86.3 3.4 50 125-174 15-64 (68)
11 4ic3_A E3 ubiquitin-protein li 99.0 1E-10 3.5E-15 85.6 2.3 51 77-127 23-73 (74)
12 2ecg_A Baculoviral IAP repeat- 99.0 1.2E-10 4.1E-15 85.4 2.4 50 78-127 25-74 (75)
13 2vje_B MDM4 protein; proto-onc 99.0 1.4E-10 4.7E-15 82.4 2.4 50 125-174 7-62 (63)
14 2ysl_A Tripartite motif-contai 99.0 2E-10 6.7E-15 83.1 2.5 48 240-287 16-71 (73)
15 2djb_A Polycomb group ring fin 98.9 1.7E-10 5.7E-15 83.7 1.7 50 240-289 11-66 (72)
16 4ayc_A E3 ubiquitin-protein li 98.9 2.3E-10 7.9E-15 93.5 2.6 48 239-286 48-100 (138)
17 1e4u_A Transcriptional repress 98.9 3.2E-10 1.1E-14 84.1 2.8 51 240-290 7-67 (78)
18 3fl2_A E3 ubiquitin-protein li 98.9 2.4E-10 8.1E-15 91.6 1.9 50 236-285 44-99 (124)
19 2vje_A E3 ubiquitin-protein li 98.9 2.7E-10 9.1E-15 81.2 1.6 50 125-174 8-63 (64)
20 3lrq_A E3 ubiquitin-protein li 98.9 3E-10 1E-14 87.8 1.8 52 236-287 14-72 (100)
21 2ecy_A TNF receptor-associated 98.9 4.3E-10 1.5E-14 80.0 2.4 48 240-287 11-64 (66)
22 1jm7_A BRCA1, breast cancer ty 98.9 3.6E-10 1.2E-14 88.4 1.6 56 231-286 8-71 (112)
23 2yur_A Retinoblastoma-binding 98.9 4.1E-10 1.4E-14 82.2 1.3 48 240-287 11-66 (74)
24 3t6p_A Baculoviral IAP repeat- 98.9 7.1E-10 2.4E-14 104.0 3.3 58 233-290 284-343 (345)
25 3ztg_A E3 ubiquitin-protein li 98.8 5.6E-10 1.9E-14 84.5 1.5 45 240-284 9-61 (92)
26 2egp_A Tripartite motif-contai 98.8 1.2E-09 4.2E-14 80.0 3.3 47 240-286 8-66 (79)
27 1bor_A Transcription factor PM 98.8 1E-09 3.4E-14 76.0 2.6 44 242-285 4-49 (56)
28 1t1h_A Gspef-atpub14, armadill 98.8 8.6E-10 2.9E-14 80.9 1.8 47 240-286 4-56 (78)
29 2d8t_A Dactylidin, ring finger 98.8 9.7E-10 3.3E-14 79.4 1.7 45 242-286 13-62 (71)
30 1jm7_B BARD1, BRCA1-associated 98.8 2.5E-09 8.7E-14 84.8 4.1 52 235-286 13-68 (117)
31 2ea6_A Ring finger protein 4; 98.8 1.2E-09 4E-14 77.9 1.3 46 241-286 12-69 (69)
32 2ecn_A Ring finger protein 141 98.8 9.7E-10 3.3E-14 78.9 0.8 51 240-290 11-65 (70)
33 2csy_A Zinc finger protein 183 98.8 1.7E-09 5.7E-14 80.1 2.0 44 241-284 12-60 (81)
34 1g25_A CDK-activating kinase a 98.8 2.1E-09 7.1E-14 76.2 2.0 45 243-287 2-57 (65)
35 3ng2_A RNF4, snurf, ring finge 98.8 2.2E-09 7.5E-14 77.0 2.0 46 241-286 7-64 (71)
36 2ct2_A Tripartite motif protei 98.7 2.7E-09 9.3E-14 79.7 2.3 46 240-285 11-68 (88)
37 2ecw_A Tripartite motif-contai 98.7 3.9E-09 1.3E-13 78.0 3.0 47 240-286 15-72 (85)
38 2kr4_A Ubiquitin conjugation f 98.7 2E-09 6.7E-14 80.9 1.0 48 240-287 10-62 (85)
39 2ecv_A Tripartite motif-contai 98.7 5E-09 1.7E-13 77.4 3.2 47 240-286 15-72 (85)
40 2ckl_A Polycomb group ring fin 98.7 3.8E-09 1.3E-13 82.4 2.3 49 238-286 9-63 (108)
41 2ysj_A Tripartite motif-contai 98.7 3.4E-09 1.2E-13 74.5 1.4 40 240-279 16-63 (63)
42 3l11_A E3 ubiquitin-protein li 98.7 3.6E-09 1.2E-13 83.4 1.6 44 242-285 13-62 (115)
43 1wgm_A Ubiquitin conjugation f 98.7 5.4E-09 1.9E-13 80.7 2.4 48 240-287 18-71 (98)
44 2kre_A Ubiquitin conjugation f 98.7 4.7E-09 1.6E-13 81.4 1.9 48 240-287 25-77 (100)
45 2y43_A E3 ubiquitin-protein li 98.7 3.4E-09 1.2E-13 81.4 1.1 46 240-285 18-69 (99)
46 1z6u_A NP95-like ring finger p 98.7 4.6E-09 1.6E-13 87.2 1.7 49 238-286 72-126 (150)
47 2ecj_A Tripartite motif-contai 98.7 7.3E-09 2.5E-13 71.3 2.3 40 240-279 11-58 (58)
48 2xeu_A Ring finger protein 4; 98.7 4.9E-09 1.7E-13 73.5 1.2 44 243-286 2-57 (64)
49 1chc_A Equine herpes virus-1 r 98.6 8E-09 2.7E-13 73.6 2.1 46 242-287 3-54 (68)
50 1rmd_A RAG1; V(D)J recombinati 98.6 6.4E-09 2.2E-13 82.1 1.5 46 242-287 21-72 (116)
51 3hct_A TNF receptor-associated 98.6 6.7E-09 2.3E-13 82.4 1.6 47 240-286 14-66 (118)
52 2ect_A Ring finger protein 126 98.6 1.2E-08 3.9E-13 74.8 2.1 47 241-287 12-66 (78)
53 1iym_A EL5; ring-H2 finger, ub 98.6 1.7E-08 5.8E-13 68.8 2.8 44 241-284 2-54 (55)
54 2ep4_A Ring finger protein 24; 98.6 1.7E-08 5.8E-13 73.1 2.4 48 241-288 12-67 (74)
55 3t6p_A Baculoviral IAP repeat- 98.6 2.9E-08 1E-12 93.0 3.9 52 76-127 293-344 (345)
56 2ecm_A Ring finger and CHY zin 98.6 2E-08 7E-13 68.3 2.1 42 243-284 4-54 (55)
57 3knv_A TNF receptor-associated 98.5 6.4E-09 2.2E-13 85.5 -0.8 45 239-283 26-76 (141)
58 2ckl_B Ubiquitin ligase protei 98.5 1.4E-08 4.7E-13 85.2 0.6 48 238-285 48-102 (165)
59 2kiz_A E3 ubiquitin-protein li 98.5 6E-08 2E-12 69.2 2.5 46 242-287 12-65 (69)
60 2yu4_A E3 SUMO-protein ligase 98.5 3.7E-08 1.3E-12 75.2 1.4 47 240-286 3-64 (94)
61 3hcs_A TNF receptor-associated 98.4 3.7E-08 1.3E-12 82.8 1.3 47 240-286 14-66 (170)
62 1v87_A Deltex protein 2; ring- 98.4 4.4E-08 1.5E-12 76.8 0.8 44 243-286 24-95 (114)
63 2l0b_A E3 ubiquitin-protein li 98.4 6.1E-08 2.1E-12 73.4 1.6 44 242-285 38-89 (91)
64 1x4j_A Ring finger protein 38; 98.4 5.9E-08 2E-12 70.5 1.4 44 242-285 21-72 (75)
65 2d8t_A Dactylidin, ring finger 98.4 2.3E-07 7.9E-12 66.7 4.3 49 73-122 10-62 (71)
66 2c2l_A CHIP, carboxy terminus 98.4 7.7E-08 2.6E-12 86.1 1.5 46 242-287 206-257 (281)
67 2y1n_A E3 ubiquitin-protein li 98.3 3.2E-07 1.1E-11 86.9 3.7 51 239-289 327-383 (389)
68 2f42_A STIP1 homology and U-bo 98.2 2E-07 6.9E-12 79.5 1.3 49 240-288 102-156 (179)
69 2ysl_A Tripartite motif-contai 98.2 9.9E-07 3.4E-11 63.3 4.3 48 73-121 15-69 (73)
70 3htk_C E3 SUMO-protein ligase 98.2 4.1E-07 1.4E-11 81.7 1.6 48 240-287 177-234 (267)
71 2ea6_A Ring finger protein 4; 98.2 8.1E-07 2.8E-11 62.8 2.7 49 72-121 9-68 (69)
72 2ecn_A Ring finger protein 141 98.2 5E-07 1.7E-11 64.5 1.6 50 73-124 10-63 (70)
73 2ecl_A Ring-box protein 2; RNF 98.1 7.6E-07 2.6E-11 65.9 1.9 44 243-286 14-77 (81)
74 1chc_A Equine herpes virus-1 r 98.1 1.8E-06 6.2E-11 61.1 3.4 47 77-124 4-55 (68)
75 2csy_A Zinc finger protein 183 98.1 3.2E-06 1.1E-10 62.1 4.7 48 73-121 10-61 (81)
76 2ecm_A Ring finger and CHY zin 98.0 4.6E-06 1.6E-10 56.3 3.8 44 76-120 3-54 (55)
77 2ecv_A Tripartite motif-contai 98.0 7.6E-06 2.6E-10 59.9 5.2 48 73-121 14-71 (85)
78 2egp_A Tripartite motif-contai 98.0 2.8E-06 9.5E-11 61.8 2.7 50 71-121 5-65 (79)
79 2ct2_A Tripartite motif protei 98.0 6.5E-06 2.2E-10 60.9 4.8 49 72-121 9-68 (88)
80 2ecw_A Tripartite motif-contai 98.0 8.4E-06 2.9E-10 59.7 5.3 48 73-121 14-71 (85)
81 1e4u_A Transcriptional repress 98.0 3.3E-06 1.1E-10 62.2 3.0 51 73-124 6-65 (78)
82 2kiz_A E3 ubiquitin-protein li 98.0 6.6E-06 2.2E-10 58.4 4.3 51 73-124 9-66 (69)
83 2ect_A Ring finger protein 126 97.9 1.1E-05 3.6E-10 58.7 5.2 49 73-122 10-65 (78)
84 2djb_A Polycomb group ring fin 97.9 9.1E-06 3.1E-10 58.3 4.2 49 73-122 10-63 (72)
85 1bor_A Transcription factor PM 97.9 6E-06 2.1E-10 56.6 2.7 45 76-121 4-49 (56)
86 2ecy_A TNF receptor-associated 97.9 6.7E-06 2.3E-10 57.9 3.0 48 73-121 10-62 (66)
87 4ayc_A E3 ubiquitin-protein li 97.9 9.4E-06 3.2E-10 65.8 3.9 43 126-169 54-100 (138)
88 1wim_A KIAA0161 protein; ring 97.8 3E-06 1E-10 64.2 0.8 41 242-282 3-61 (94)
89 1iym_A EL5; ring-H2 finger, ub 97.8 1.4E-05 4.9E-10 53.9 3.9 44 76-120 3-54 (55)
90 1x4j_A Ring finger protein 38; 97.8 9.9E-06 3.4E-10 58.5 2.9 47 74-121 19-72 (75)
91 2ep4_A Ring finger protein 24; 97.8 1.1E-05 3.8E-10 58.0 3.1 52 72-124 9-67 (74)
92 3ng2_A RNF4, snurf, ring finge 97.8 5.5E-06 1.9E-10 58.9 1.3 46 75-121 7-63 (71)
93 2ecj_A Tripartite motif-contai 97.7 2.3E-05 7.7E-10 53.4 3.8 42 73-115 10-58 (58)
94 2yur_A Retinoblastoma-binding 97.7 3.3E-05 1.1E-09 55.8 4.6 47 73-120 10-63 (74)
95 3dpl_R Ring-box protein 1; ubi 97.7 1.2E-05 4.2E-10 62.7 2.1 42 243-284 36-100 (106)
96 2xeu_A Ring finger protein 4; 97.7 1.5E-05 5.2E-10 55.2 2.1 41 127-168 5-56 (64)
97 2l0b_A E3 ubiquitin-protein li 97.6 2.7E-05 9.3E-10 58.6 3.1 46 75-121 37-89 (91)
98 1g25_A CDK-activating kinase a 97.6 1.7E-05 5.6E-10 55.7 1.7 42 126-168 4-55 (65)
99 3ztg_A E3 ubiquitin-protein li 97.6 3.9E-05 1.3E-09 57.4 3.5 47 73-120 8-61 (92)
100 2ysj_A Tripartite motif-contai 97.6 6.9E-05 2.4E-09 52.0 4.2 42 73-115 15-63 (63)
101 2ckl_A Polycomb group ring fin 97.5 5.3E-05 1.8E-09 58.6 3.6 46 123-169 13-63 (108)
102 3fl2_A E3 ubiquitin-protein li 97.5 5.9E-05 2E-09 59.8 3.9 43 125-168 52-99 (124)
103 3lrq_A E3 ubiquitin-protein li 97.5 5.3E-05 1.8E-09 58.0 3.3 43 125-168 22-70 (100)
104 2y1n_A E3 ubiquitin-protein li 97.5 5.4E-05 1.9E-09 71.7 3.9 46 126-172 333-383 (389)
105 3l11_A E3 ubiquitin-protein li 97.5 6E-05 2E-09 58.9 3.5 43 125-168 15-62 (115)
106 2bay_A PRE-mRNA splicing facto 97.4 3.7E-05 1.3E-09 53.9 1.4 46 244-289 3-54 (61)
107 1jm7_A BRCA1, breast cancer ty 97.4 4.5E-05 1.5E-09 59.0 1.9 43 125-168 21-70 (112)
108 2y43_A E3 ubiquitin-protein li 97.4 0.00012 4.1E-09 55.6 3.9 43 125-168 22-69 (99)
109 1t1h_A Gspef-atpub14, armadill 97.3 0.00014 4.7E-09 52.7 3.5 43 125-168 8-55 (78)
110 4a0k_B E3 ubiquitin-protein li 97.3 3.6E-05 1.2E-09 61.1 0.2 40 245-284 49-111 (117)
111 1jm7_B BARD1, BRCA1-associated 97.3 9.4E-05 3.2E-09 58.1 2.6 42 125-167 22-66 (117)
112 1z6u_A NP95-like ring finger p 97.3 0.00016 5.4E-09 59.6 3.9 44 125-169 78-126 (150)
113 3hct_A TNF receptor-associated 97.3 0.00017 5.7E-09 56.7 3.5 43 125-168 18-65 (118)
114 2ckl_B Ubiquitin ligase protei 97.2 0.00025 8.5E-09 58.9 3.7 43 125-168 54-102 (165)
115 1rmd_A RAG1; V(D)J recombinati 97.1 0.00031 1E-08 54.8 3.9 43 125-168 23-70 (116)
116 2ecl_A Ring-box protein 2; RNF 97.1 0.00036 1.2E-08 51.2 3.5 41 127-168 28-76 (81)
117 1v87_A Deltex protein 2; ring- 96.9 0.0003 1E-08 54.6 1.5 32 137-169 55-95 (114)
118 2d8s_A Cellular modulator of i 96.8 0.00053 1.8E-08 50.5 2.5 44 243-286 14-71 (80)
119 3hcs_A TNF receptor-associated 96.7 0.00094 3.2E-08 55.6 3.7 44 124-168 17-65 (170)
120 3knv_A TNF receptor-associated 96.6 0.00026 9.1E-09 57.7 -0.3 42 124-166 30-76 (141)
121 3vk6_A E3 ubiquitin-protein li 96.6 0.002 6.8E-08 49.3 4.1 33 138-171 15-52 (101)
122 3dpl_R Ring-box protein 1; ubi 96.4 0.0021 7.3E-08 49.8 3.6 29 137-166 67-99 (106)
123 2kr4_A Ubiquitin conjugation f 96.3 0.0037 1.3E-07 46.2 4.4 44 124-168 13-60 (85)
124 3vk6_A E3 ubiquitin-protein li 96.3 0.0018 6.3E-08 49.5 2.5 41 246-286 3-50 (101)
125 2kre_A Ubiquitin conjugation f 96.2 0.0034 1.2E-07 48.0 3.4 44 124-168 28-75 (100)
126 1wgm_A Ubiquitin conjugation f 96.1 0.0044 1.5E-07 47.2 3.9 44 124-168 21-69 (98)
127 2c2l_A CHIP, carboxy terminus 95.8 0.0065 2.2E-07 53.7 4.2 44 124-168 207-255 (281)
128 3aaa_C Myotrophin, protein V-1 95.4 0.0063 2.2E-07 46.4 2.2 43 14-56 53-95 (123)
129 3c5r_A BARD-1, BRCA1-associate 95.4 0.0099 3.4E-07 46.1 3.4 39 15-53 90-128 (137)
130 4a0k_B E3 ubiquitin-protein li 95.1 0.0036 1.2E-07 49.4 0.0 28 138-166 79-110 (117)
131 1n0q_A 3ANK, 3 ankyrin repeats 95.1 0.0055 1.9E-07 44.5 0.9 42 14-55 15-56 (93)
132 3t8k_A Uncharacterized protein 94.8 0.013 4.4E-07 49.0 2.7 27 15-41 134-161 (186)
133 4b93_B Ankyrin repeat domain-c 94.7 0.02 6.7E-07 50.5 3.8 38 14-51 198-236 (269)
134 2l6b_A NR1C; ankyrin, consensu 94.4 0.017 5.7E-07 43.3 2.2 40 15-54 56-95 (115)
135 1s70_B 130 kDa myosin-binding 94.4 0.042 1.4E-06 48.0 5.0 41 15-56 246-286 (299)
136 2yu4_A E3 SUMO-protein ligase 94.4 0.026 9E-07 42.2 3.2 40 125-165 7-59 (94)
137 2f42_A STIP1 homology and U-bo 94.2 0.037 1.3E-06 46.8 4.1 44 124-168 105-153 (179)
138 3f6q_A Integrin-linked protein 94.1 0.039 1.3E-06 44.7 4.0 42 15-56 119-160 (179)
139 1n0q_A 3ANK, 3 ankyrin repeats 94.1 0.014 4.7E-07 42.3 1.0 41 14-54 48-88 (93)
140 1ikn_D Protein (I-kappa-B-alph 94.0 0.1 3.6E-06 43.9 6.5 45 14-58 164-208 (236)
141 3twr_A Tankyrase-2; ankyrin re 93.9 0.057 2E-06 42.9 4.5 28 15-42 89-116 (165)
142 2d8s_A Cellular modulator of i 93.9 0.088 3E-06 38.4 5.1 48 74-122 11-71 (80)
143 4gpm_A Engineered protein OR26 93.7 0.016 5.4E-07 47.7 0.8 43 14-56 83-125 (169)
144 2ct0_A Non-SMC element 1 homol 93.5 0.046 1.6E-06 39.5 2.9 43 243-285 14-64 (74)
145 3ehr_A Osteoclast-stimulating 93.5 0.024 8.1E-07 47.7 1.6 43 15-57 154-196 (222)
146 1wim_A KIAA0161 protein; ring 93.5 0.027 9.2E-07 42.0 1.7 40 125-165 5-61 (94)
147 2xai_A ASB-9, ankyrin repeat a 93.3 0.073 2.5E-06 46.0 4.4 38 14-51 179-217 (261)
148 3t8k_A Uncharacterized protein 93.2 0.027 9.2E-07 47.0 1.5 28 14-41 55-82 (186)
149 2jun_A Midline-1; B-BOX, TRIM, 93.2 0.034 1.2E-06 41.9 1.9 30 243-272 2-35 (101)
150 1d9s_A Cyclin-dependent kinase 93.2 0.096 3.3E-06 40.4 4.6 42 14-56 25-66 (136)
151 4gpm_A Engineered protein OR26 93.0 0.025 8.6E-07 46.5 1.0 44 14-57 50-93 (169)
152 3d9h_A CDNA FLJ77766, highly s 92.8 0.089 3.1E-06 46.2 4.4 28 15-42 236-263 (285)
153 3aaa_C Myotrophin, protein V-1 92.7 0.027 9.2E-07 42.8 0.6 41 15-55 21-61 (123)
154 2zgd_A 3 repeat synthetic anky 92.6 0.025 8.4E-07 42.5 0.4 43 14-56 37-79 (110)
155 1d9s_A Cyclin-dependent kinase 92.4 0.025 8.6E-07 43.8 0.2 42 14-55 57-99 (136)
156 3aji_A 26S proteasome non-ATPa 92.4 0.043 1.5E-06 46.0 1.6 40 15-54 153-192 (231)
157 3k1l_B Fancl; UBC, ring, RWD, 92.4 0.032 1.1E-06 51.9 0.8 43 243-285 307-373 (381)
158 1dcq_A PYK2-associated protein 92.2 0.035 1.2E-06 49.3 0.8 27 15-41 186-212 (278)
159 3b7b_A Euchromatic histone-lys 92.1 0.073 2.5E-06 44.7 2.7 41 15-55 158-198 (237)
160 1n0r_A 4ANK, 4 ankyrin repeats 92.0 0.037 1.3E-06 41.3 0.6 42 14-55 48-89 (126)
161 1bi7_B P16INK4A, MTS1, multipl 91.9 0.029 1E-06 44.5 -0.0 39 15-53 92-130 (156)
162 1oy3_D Transcription factor in 91.6 0.059 2E-06 46.3 1.6 45 14-58 205-249 (282)
163 1yyh_A HN1;, notch 1, ankyrin 91.6 0.042 1.4E-06 47.2 0.7 40 15-54 171-210 (253)
164 2jab_A H10-2-G3; HER2, darpin, 91.6 0.043 1.5E-06 42.4 0.7 43 14-56 60-102 (136)
165 2zgd_A 3 repeat synthetic anky 91.6 0.051 1.8E-06 40.6 1.0 33 14-46 70-102 (110)
166 2b0o_E UPLC1; arfgap, structur 91.1 0.048 1.6E-06 49.0 0.5 29 14-42 206-234 (301)
167 3v30_A DNA-binding protein rfx 90.8 0.049 1.7E-06 43.6 0.2 26 16-41 117-142 (172)
168 2l6b_A NR1C; ankyrin, consensu 90.6 0.11 3.7E-06 38.7 2.0 43 14-56 22-64 (115)
169 1bi7_B P16INK4A, MTS1, multipl 90.6 0.3 1E-05 38.4 4.9 40 15-55 26-65 (156)
170 2y1l_E Darpin-8.4; hydrolase-i 90.4 0.066 2.3E-06 42.9 0.7 43 14-56 93-135 (169)
171 1awc_B Protein (GA binding pro 90.2 0.075 2.6E-06 41.7 0.9 40 15-54 81-120 (153)
172 1awc_B Protein (GA binding pro 90.2 0.066 2.2E-06 42.1 0.5 33 14-46 113-145 (153)
173 2fo1_E LIN-12 protein; beta-ba 90.1 0.076 2.6E-06 48.7 0.9 28 15-42 293-321 (373)
174 3c5r_A BARD-1, BRCA1-associate 90.1 0.068 2.3E-06 41.2 0.5 40 15-54 57-96 (137)
175 1dcq_A PYK2-associated protein 89.9 0.068 2.3E-06 47.3 0.4 42 14-55 218-259 (278)
176 3v31_A Ankyrin repeat family A 89.9 0.064 2.2E-06 42.7 0.2 40 15-54 83-122 (167)
177 2jab_A H10-2-G3; HER2, darpin, 89.7 0.086 2.9E-06 40.7 0.8 43 14-56 27-69 (136)
178 1bd8_A P19INK4D CDK4/6 inhibit 89.7 0.079 2.7E-06 41.5 0.6 26 16-41 83-108 (156)
179 3lvq_E ARF-GAP with SH3 domain 89.7 0.088 3E-06 50.5 1.0 29 15-43 221-249 (497)
180 1ihb_A P18-INK4C(INK6), cyclin 89.6 0.084 2.9E-06 41.6 0.6 29 15-43 84-112 (162)
181 3lvq_E ARF-GAP with SH3 domain 89.5 0.18 6.3E-06 48.3 3.1 45 14-58 187-231 (497)
182 3eu9_A Huntingtin-interacting 89.5 0.061 2.1E-06 44.8 -0.3 41 15-55 191-231 (240)
183 1ycs_B 53BP2, P53BP2; ankyrin 88.9 0.091 3.1E-06 44.8 0.4 40 15-54 84-123 (239)
184 3f6q_A Integrin-linked protein 88.9 0.11 3.8E-06 41.9 1.0 39 15-53 86-124 (179)
185 2rfa_A Transient receptor pote 88.9 0.14 4.7E-06 42.9 1.5 34 14-47 134-167 (232)
186 2f8y_A Notch homolog 1, transl 88.9 0.13 4.4E-06 42.6 1.4 42 14-55 138-179 (223)
187 3htk_C E3 SUMO-protein ligase 88.9 0.19 6.7E-06 44.9 2.5 43 125-168 181-232 (267)
188 1vyx_A ORF K3, K3RING; zinc-bi 88.8 0.22 7.6E-06 34.2 2.3 43 242-284 4-58 (60)
189 2b0o_E UPLC1; arfgap, structur 88.6 0.095 3.2E-06 47.0 0.4 41 14-54 239-279 (301)
190 3deo_A Signal recognition part 88.6 0.092 3.1E-06 42.8 0.2 27 15-41 124-150 (183)
191 3twr_A Tankyrase-2; ankyrin re 88.6 0.11 3.9E-06 41.1 0.8 29 15-43 56-84 (165)
192 1oy3_D Transcription factor in 88.3 0.2 6.7E-06 42.9 2.2 43 15-57 59-101 (282)
193 1yyh_A HN1;, notch 1, ankyrin 88.2 0.12 4.2E-06 44.2 0.8 26 16-41 139-164 (253)
194 1bd8_A P19INK4D CDK4/6 inhibit 88.2 0.13 4.4E-06 40.3 0.8 42 14-55 48-89 (156)
195 2rfm_A Putative ankyrin repeat 88.1 0.13 4.5E-06 41.9 0.9 40 15-54 115-154 (192)
196 2y1l_E Darpin-8.4; hydrolase-i 88.1 0.14 4.7E-06 41.0 1.0 43 14-56 60-102 (169)
197 4hbd_A KN motif and ankyrin re 88.0 0.11 3.9E-06 45.4 0.5 42 14-55 196-237 (276)
198 3ljn_A Hypothetical protein; a 88.0 0.11 3.9E-06 46.8 0.4 41 15-55 225-265 (364)
199 1n0r_A 4ANK, 4 ankyrin repeats 87.8 0.14 4.7E-06 38.1 0.8 42 14-55 15-56 (126)
200 2vge_A RELA-associated inhibit 87.8 0.15 5.1E-06 43.6 1.1 40 15-54 68-107 (229)
201 2jrp_A Putative cytoplasmic pr 87.7 0.27 9.3E-06 36.0 2.3 59 110-168 3-63 (81)
202 3jue_A Arfgap with coiled-coil 87.3 0.14 4.8E-06 47.6 0.7 28 15-42 282-309 (368)
203 2vge_A RELA-associated inhibit 87.1 0.64 2.2E-05 39.5 4.7 43 14-56 100-145 (229)
204 1k1a_A B-cell lymphoma 3-encod 86.7 0.15 5.2E-06 42.6 0.5 24 18-41 167-190 (241)
205 4hbd_A KN motif and ankyrin re 86.7 0.14 4.9E-06 44.8 0.3 42 14-55 229-271 (276)
206 3deo_A Signal recognition part 86.6 0.26 9E-06 40.0 1.9 41 15-55 90-131 (183)
207 3aji_A 26S proteasome non-ATPa 86.4 0.2 6.7E-06 41.8 1.0 27 15-41 120-146 (231)
208 3b7b_A Euchromatic histone-lys 86.3 0.2 6.7E-06 41.9 1.0 40 15-54 125-164 (237)
209 3ui2_A Signal recognition part 86.3 0.19 6.4E-06 43.2 0.9 27 15-41 125-151 (244)
210 4b93_B Ankyrin repeat domain-c 86.2 0.14 4.8E-06 44.9 -0.0 27 15-41 133-159 (269)
211 1n11_A Ankyrin; clathrin, BAND 86.2 0.29 9.8E-06 45.2 2.1 27 15-41 358-384 (437)
212 3v30_A DNA-binding protein rfx 86.1 0.2 6.8E-06 39.9 0.9 26 16-41 84-109 (172)
213 3v31_A Ankyrin repeat family A 86.0 0.17 5.8E-06 40.1 0.4 41 14-54 49-89 (167)
214 3utm_A Tankyrase-1; tankyrase, 85.8 0.2 6.8E-06 44.2 0.8 26 16-41 262-287 (351)
215 4g8k_A 2-5A-dependent ribonucl 85.7 0.2 6.8E-06 44.6 0.8 41 15-55 220-260 (337)
216 4g8k_A 2-5A-dependent ribonucl 85.6 0.18 6.1E-06 45.0 0.4 42 15-56 39-81 (337)
217 2bay_A PRE-mRNA splicing facto 85.5 0.64 2.2E-05 31.8 3.1 42 126-168 4-50 (61)
218 2f8y_A Notch homolog 1, transl 85.4 0.21 7.2E-06 41.3 0.7 42 14-55 105-146 (223)
219 1ihb_A P18-INK4C(INK6), cyclin 85.2 0.4 1.4E-05 37.5 2.2 42 14-56 18-59 (162)
220 2etb_A Transient receptor pote 85.1 0.063 2.2E-06 45.9 -2.8 42 15-56 195-243 (256)
221 3jue_A Arfgap with coiled-coil 84.9 0.26 8.9E-06 45.8 1.2 41 15-55 249-289 (368)
222 2dzn_A Probable 26S proteasome 84.9 0.25 8.4E-06 41.0 0.9 40 15-54 121-160 (228)
223 3utm_A Tankyrase-1; tankyrase, 84.7 0.32 1.1E-05 42.8 1.6 29 14-42 293-321 (351)
224 3jxi_A Vanilloid receptor-rela 84.6 0.045 1.6E-06 46.8 -4.0 45 14-58 198-249 (260)
225 3ehr_A Osteoclast-stimulating 84.2 0.19 6.5E-06 42.0 -0.1 27 15-41 87-113 (222)
226 1n11_A Ankyrin; clathrin, BAND 84.2 0.25 8.4E-06 45.7 0.6 40 15-54 325-364 (437)
227 1sw6_A Regulatory protein SWI6 84.0 0.28 9.6E-06 44.0 0.9 30 14-43 144-173 (327)
228 1ikn_D Protein (I-kappa-B-alph 83.9 0.25 8.5E-06 41.5 0.5 43 14-56 130-173 (236)
229 1wdy_A 2-5A-dependent ribonucl 83.7 0.33 1.1E-05 41.2 1.2 42 14-55 199-240 (285)
230 3hra_A Ankyrin repeat family p 83.5 0.27 9.3E-06 39.9 0.5 41 14-54 52-92 (201)
231 3ui2_A Signal recognition part 83.3 0.33 1.1E-05 41.6 1.1 41 15-55 91-132 (244)
232 1wdy_A 2-5A-dependent ribonucl 82.9 0.31 1.1E-05 41.4 0.7 29 13-41 160-189 (285)
233 1vyx_A ORF K3, K3RING; zinc-bi 82.9 0.63 2.1E-05 31.8 2.1 46 75-120 3-58 (60)
234 1s70_B 130 kDa myosin-binding 82.8 0.63 2.1E-05 40.3 2.7 39 15-53 87-125 (299)
235 2etb_A Transient receptor pote 82.2 0.36 1.2E-05 41.0 0.8 29 14-42 149-180 (256)
236 2rfa_A Transient receptor pote 81.8 0.31 1.1E-05 40.6 0.2 42 16-57 173-220 (232)
237 3kea_A K1L; tropism, ANK repea 81.4 0.32 1.1E-05 42.7 0.2 41 15-55 76-116 (285)
238 2dzn_A Probable 26S proteasome 81.0 0.38 1.3E-05 39.7 0.6 40 15-54 154-194 (228)
239 2xai_A ASB-9, ankyrin repeat a 80.9 0.41 1.4E-05 41.1 0.8 28 15-42 50-77 (261)
240 3jxi_A Vanilloid receptor-rela 80.4 0.45 1.5E-05 40.4 0.8 29 14-42 153-184 (260)
241 1ycs_B 53BP2, P53BP2; ankyrin 80.1 0.31 1E-05 41.5 -0.4 42 14-55 50-91 (239)
242 2ko5_A Ring finger protein Z; 80.1 0.8 2.8E-05 34.4 2.0 48 242-289 26-77 (99)
243 2pnn_A Transient receptor pote 80.0 0.47 1.6E-05 40.8 0.8 29 14-42 161-192 (273)
244 2rfm_A Putative ankyrin repeat 79.8 0.36 1.2E-05 39.2 -0.0 39 15-53 82-120 (192)
245 2fo1_E LIN-12 protein; beta-ba 78.1 0.59 2E-05 42.6 0.9 40 15-54 180-219 (373)
246 3d9h_A CDNA FLJ77766, highly s 77.2 0.59 2E-05 40.8 0.6 40 15-54 73-112 (285)
247 2pnn_A Transient receptor pote 76.8 0.59 2E-05 40.1 0.5 41 15-55 115-169 (273)
248 1k1a_A B-cell lymphoma 3-encod 75.8 0.65 2.2E-05 38.6 0.4 40 15-54 60-99 (241)
249 3ljn_A Hypothetical protein; a 75.3 1.2 4.2E-05 39.8 2.2 40 14-53 153-192 (364)
250 3kea_A K1L; tropism, ANK repea 75.0 0.35 1.2E-05 42.4 -1.6 43 14-56 174-217 (285)
251 3hra_A Ankyrin repeat family p 72.5 0.85 2.9E-05 36.8 0.4 27 15-41 120-147 (201)
252 3eu9_A Huntingtin-interacting 70.1 1.2 4.2E-05 36.6 0.8 43 14-56 22-64 (240)
253 1sw6_A Regulatory protein SWI6 70.1 0.78 2.7E-05 41.0 -0.4 44 14-57 110-154 (327)
254 2zet_C Melanophilin; complex, 65.8 1.9 6.4E-05 35.3 1.0 55 228-282 40-117 (153)
255 1zbd_B Rabphilin-3A; G protein 64.5 1.3 4.4E-05 35.5 -0.2 55 228-282 33-107 (134)
256 2ct0_A Non-SMC element 1 homol 59.8 9.7 0.00033 27.0 3.8 27 142-169 33-65 (74)
257 3m62_A Ubiquitin conjugation f 56.8 5.7 0.00019 41.5 2.9 49 240-288 887-941 (968)
258 3nw0_A Non-structural maintena 47.8 20 0.00069 31.0 4.7 58 228-285 162-229 (238)
259 2ko5_A Ring finger protein Z; 47.1 17 0.00059 27.2 3.4 49 75-125 25-77 (99)
260 3k1l_B Fancl; UBC, ring, RWD, 47.0 11 0.00039 35.0 3.0 48 75-123 305-375 (381)
261 2aja_A Ankyrin repeat family p 45.9 1.3 4.6E-05 41.0 -3.5 41 15-55 177-220 (376)
262 3i2d_A E3 SUMO-protein ligase 45.2 9.6 0.00033 35.5 2.2 43 244-286 249-301 (371)
263 2cs3_A Protein C14ORF4, MY039 45.1 11 0.00037 27.5 2.0 31 243-273 14-49 (93)
264 2cup_A Skeletal muscle LIM-pro 42.8 18 0.00062 26.2 3.1 57 110-167 6-77 (101)
265 1z60_A TFIIH basal transcripti 41.6 23 0.00078 24.1 3.1 35 245-279 16-58 (59)
266 4fo9_A E3 SUMO-protein ligase 41.0 12 0.00041 34.7 2.2 44 243-286 214-267 (360)
267 2jne_A Hypothetical protein YF 40.1 6.1 0.00021 29.8 0.0 24 110-133 33-56 (101)
268 1m3v_A FLIN4, fusion of the LI 39.6 21 0.00071 27.2 3.1 58 110-168 6-81 (122)
269 2rgt_A Fusion of LIM/homeobox 38.9 29 0.00098 27.9 4.0 59 109-168 6-77 (169)
270 1wil_A KIAA1045 protein; ring 38.7 16 0.00056 26.8 2.1 32 241-272 12-46 (89)
271 2jtn_A LIM domain-binding prot 37.4 29 0.001 28.2 3.9 59 109-168 60-131 (182)
272 2xqn_T Testin, TESS; metal-bin 37.0 28 0.00096 26.3 3.5 58 110-168 4-75 (126)
273 2egq_A FHL1 protein; LIM domai 36.3 21 0.00072 24.4 2.4 22 100-121 4-27 (77)
274 2jun_A Midline-1; B-BOX, TRIM, 36.2 14 0.00049 26.9 1.6 28 127-155 5-35 (101)
275 1z2q_A LM5-1; membrane protein 30.9 23 0.00079 25.4 1.9 30 243-272 20-54 (84)
276 2yw8_A RUN and FYVE domain-con 30.0 24 0.00082 25.2 1.9 31 242-272 17-52 (82)
277 2jmo_A Parkin; IBR, E3 ligase, 29.4 16 0.00056 26.0 0.9 21 260-281 55-75 (80)
278 1v6g_A Actin binding LIM prote 28.2 52 0.0018 22.7 3.4 23 99-121 3-27 (81)
279 1joc_A EEA1, early endosomal a 27.4 28 0.00094 27.1 1.9 29 244-272 69-102 (125)
280 3mjh_B Early endosome antigen 26.9 12 0.00041 22.6 -0.2 15 243-257 4-18 (34)
281 1vfy_A Phosphatidylinositol-3- 25.9 35 0.0012 23.7 2.1 28 244-271 11-43 (73)
282 1b8t_A Protein (CRP1); LIM dom 25.2 48 0.0016 27.1 3.2 56 111-166 117-185 (192)
283 1x4u_A Zinc finger, FYVE domai 24.9 29 0.00098 24.9 1.5 30 243-272 13-47 (84)
284 1wfk_A Zinc finger, FYVE domai 23.1 30 0.001 25.1 1.3 30 243-272 8-42 (88)
285 3t7l_A Zinc finger FYVE domain 23.0 39 0.0013 24.5 1.9 30 243-272 19-53 (90)
286 2cuq_A Four and A half LIM dom 22.5 61 0.0021 22.1 2.9 23 100-122 4-28 (80)
287 2xjy_A Rhombotin-2; oncoprotei 22.3 45 0.0015 25.3 2.3 58 110-168 3-78 (131)
288 1x63_A Skeletal muscle LIM-pro 20.3 65 0.0022 22.1 2.6 21 100-120 4-26 (82)
No 1
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.39 E-value=5.9e-14 Score=112.85 Aligned_cols=97 Identities=26% Similarity=0.663 Sum_probs=72.5
Q ss_pred cccccccccCCce-------EEeCCCCeecchhhHhc----CCCCCCCCcccccccceeeecCCCCccccccCCCChhhh
Q psy7970 126 EECMVCSLKKASV-------LFKPCYHMVACESCASL----MKKCVQCRTQIDHMHPMVVCCGGPGIISEVQHTTDPAEE 194 (290)
Q Consensus 126 ~~C~~C~~~~~~~-------~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e 194 (290)
..|.||++...+. +.+||||. +|..|..+ ...||.||+.+....-.
T Consensus 8 ~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~---------------------- 64 (133)
T 4ap4_A 8 VSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYH---------------------- 64 (133)
T ss_dssp CBCTTTCCBHHHHHHTTCCEEEETTCCE-EEHHHHHHHHTTCSBCTTTCCBCTTTCEE----------------------
T ss_pred CCCcccChhhhCccccccCeEecCCCCh-hhHHHHHHHHHhCCCCCCCCCcCcccccc----------------------
Confidence 4677777665544 89999998 99999954 46999999887543110
Q ss_pred hhhhccCCCCccchhhhccccccccccCCCCCChhHHHHHHHHHHhccCCCcccccccccccc-------ccc-cCCccc
Q psy7970 195 ENAVALSPNTSAATLVEASTSGALMNNGSRDTSTSDIQKLQQQLQDIKEQTMCPVCLDRLKNM-------IFL-CGHGTC 266 (290)
Q Consensus 195 ~n~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~~~l~e~~~C~IC~~~~~~~-------v~~-CGH~fC 266 (290)
++ . ..++...|+||++.+.++ +.. |||.||
T Consensus 65 ----------------------~l----~----------------i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc 102 (133)
T 4ap4_A 65 ----------------------PI----Y----------------IGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFC 102 (133)
T ss_dssp ----------------------EC----B----------------CSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEE
T ss_pred ----------------------cc----c----------------cCCCCCCCCCCCCccccccccCcceEeCCCCChhh
Confidence 00 0 003568899999999886 454 999999
Q ss_pred hHHHhcC----CCCCCCcccccccc
Q psy7970 267 QMCGDRM----SECPICRKAVEKRI 287 (290)
Q Consensus 267 ~~C~~~~----~~CP~CR~~i~~~~ 287 (290)
..|+.+| ..||+||.++....
T Consensus 103 ~~Ci~~~~~~~~~CP~Cr~~~~~~~ 127 (133)
T 4ap4_A 103 SQCLRDSLKNANTCPTCRKKINHKR 127 (133)
T ss_dssp HHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred HHHHHHHHHcCCCCCCCCCcCChhc
Confidence 9999987 48999999997654
No 2
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=4.4e-13 Score=97.04 Aligned_cols=54 Identities=20% Similarity=0.618 Sum_probs=49.2
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhhccCCCCCCcchhhcccc
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRVKKCLICREPVEKRIKIE 126 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~i~ 126 (290)
....+...|.||+++.++++|+||||.++|..|+..+++||+||++|..+++++
T Consensus 10 ~~~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~ 63 (68)
T 2ea5_A 10 PSEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALS 63 (68)
T ss_dssp CSCCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCC
T ss_pred ccCCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEee
Confidence 344566799999999999999999999999999999999999999999988765
No 3
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.27 E-value=1.3e-12 Score=95.83 Aligned_cols=57 Identities=30% Similarity=0.897 Sum_probs=49.9
Q ss_pred HHHHHHhccCCCccccccccccccccc-cCCc-cchHHHhcCCCCCCCcccccccccCC
Q psy7970 234 LQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHG-TCQMCGDRMSECPICRKAVEKRILLY 290 (290)
Q Consensus 234 l~~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~-fC~~C~~~~~~CP~CR~~i~~~~~~y 290 (290)
++++++.++++..|+||++.+.+++++ |||. ||..|+..|..||+||++|...+.+|
T Consensus 14 ~~~~~~~~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 72 (74)
T 4ic3_A 14 TEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIL 72 (74)
T ss_dssp HHHHHHHHHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEECB
T ss_pred HHHHHhcCccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEEe
Confidence 334555667789999999999999885 9999 99999999999999999999888776
No 4
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.24 E-value=3e-12 Score=102.74 Aligned_cols=92 Identities=28% Similarity=0.667 Sum_probs=74.5
Q ss_pred CCCCccccccccCcce-------EeecCCCcccccchhhhh----ccCCCCCCcchhhcc--------ccccccccccCC
Q psy7970 76 VTLDECRICSDLKRDI-------LFQPCGHVACCSVCAPRV----KKCLICREPVEKRIK--------IEECMVCSLKKA 136 (290)
Q Consensus 76 ~~~~~C~iC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~--------i~~C~~C~~~~~ 136 (290)
.+...|.||++...+. +.+||||. +|..|..+. ..||+||+.+..... ...|.+|++...
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~l~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIYIGSGTVSCPICMDGYS 83 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCE-EEHHHHHHHHTTCSBCTTTCCBCTTTCEEECBCSSSSCBCTTTCCBHH
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCCh-hhHHHHHHHHHhCCCCCCCCCcCccccccccccCCCCCCCCCCCCccc
Confidence 3456899999987665 89999996 699998654 589999999875332 358999998765
Q ss_pred ce-------EEeCCCCeecchhhHh----cCCCCCCCCcccccc
Q psy7970 137 SV-------LFKPCYHMVACESCAS----LMKKCVQCRTQIDHM 169 (290)
Q Consensus 137 ~~-------~~~PCgH~~~C~~Ca~----~~~~Cp~Cr~~i~~~ 169 (290)
.. +.+||||. +|..|.. ..+.||.||.++...
T Consensus 84 ~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 84 EIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp HHHHTTCCEEEETTSBE-EEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred cccccCcceEeCCCCCh-hhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 54 88999999 9999995 357999999998753
No 5
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.23 E-value=1.9e-12 Score=96.42 Aligned_cols=58 Identities=38% Similarity=0.883 Sum_probs=51.8
Q ss_pred HHHHHHHhccCCCccccccccccccccc-cCCc-cchHHHhcCCCCCCCcccccccccCC
Q psy7970 233 KLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHG-TCQMCGDRMSECPICRKAVEKRILLY 290 (290)
Q Consensus 233 ~l~~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~-fC~~C~~~~~~CP~CR~~i~~~~~~y 290 (290)
.++++++.+++...|+||++.+.++++. |||. ||..|+..++.||+||.++...+.+|
T Consensus 7 ~l~~~~~~l~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 66 (79)
T 2yho_A 7 VLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 66 (79)
T ss_dssp THHHHHHHHHHHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECB
T ss_pred HHHHHHHcCCCCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEE
Confidence 3667777778889999999999999885 9999 99999999999999999998887765
No 6
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=4e-12 Score=93.37 Aligned_cols=55 Identities=31% Similarity=0.958 Sum_probs=48.3
Q ss_pred HHHHhccCCCccccccccccccccc-cCCc-cchHHHhcCCCCCCCcccccccccCC
Q psy7970 236 QQLQDIKEQTMCPVCLDRLKNMIFL-CGHG-TCQMCGDRMSECPICRKAVEKRILLY 290 (290)
Q Consensus 236 ~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~-fC~~C~~~~~~CP~CR~~i~~~~~~y 290 (290)
+.+++++++..|+||++.+.+++++ |||. ||..|+..+..||+||+++...+.+|
T Consensus 17 ~~~~~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 73 (75)
T 2ecg_A 17 EQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIF 73 (75)
T ss_dssp HHHHHHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBCC
T ss_pred HHHHcCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEEe
Confidence 3444556678999999999999885 9999 99999999999999999999988887
No 7
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.21 E-value=2.4e-12 Score=91.66 Aligned_cols=52 Identities=33% Similarity=0.650 Sum_probs=46.9
Q ss_pred CCCCCccccccccCcceEee--cCCCcccccchhhhhc----cCCCCCCcchhhcccc
Q psy7970 75 MVTLDECRICSDLKRDILFQ--PCGHVACCSVCAPRVK----KCLICREPVEKRIKIE 126 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~~~~--PCgH~~~C~~Ca~~~~----~Cp~Cr~~i~~~~~i~ 126 (290)
.....+|.||+++.++++++ ||||+++|..|+.++. +||+||++|...+++|
T Consensus 4 ~~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~ 61 (63)
T 2vje_B 4 QNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVF 61 (63)
T ss_dssp GGGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEE
T ss_pred CCcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEe
Confidence 34567899999999998888 9999999999999987 9999999999988876
No 8
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.15 E-value=5.7e-12 Score=89.95 Aligned_cols=52 Identities=25% Similarity=0.678 Sum_probs=46.6
Q ss_pred CCCCCccccccccCcceEee--cCCCcccccchhhhhc----cCCCCCCcchhhcccc
Q psy7970 75 MVTLDECRICSDLKRDILFQ--PCGHVACCSVCAPRVK----KCLICREPVEKRIKIE 126 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~~~~--PCgH~~~C~~Ca~~~~----~Cp~Cr~~i~~~~~i~ 126 (290)
..+..+|.||+++.++++|+ ||||.++|..|+.++. .||+||++|...+++|
T Consensus 5 ~~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~ 62 (64)
T 2vje_A 5 LNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTY 62 (64)
T ss_dssp CGGGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEE
T ss_pred CCCcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeee
Confidence 34567899999999999998 9999999999999885 4999999999888876
No 9
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.09 E-value=2.1e-11 Score=90.66 Aligned_cols=50 Identities=32% Similarity=0.836 Sum_probs=46.5
Q ss_pred CCCccccccccCcceEeecCCCcccccchhhhhccCCCCCCcchhhcccc
Q psy7970 77 TLDECRICSDLKRDILFQPCGHVACCSVCAPRVKKCLICREPVEKRIKIE 126 (290)
Q Consensus 77 ~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~i~ 126 (290)
+...|.||++..++++|+||||.++|..|+..++.||+||++|..++++|
T Consensus 17 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~ 66 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVY 66 (79)
T ss_dssp HHTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECB
T ss_pred CCCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEE
Confidence 34589999999999999999999999999999999999999999988766
No 10
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=4.7e-11 Score=86.27 Aligned_cols=50 Identities=22% Similarity=0.685 Sum_probs=46.9
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhcCCCCCCCCcccccccceee
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASLMKKCVQCRTQIDHMHPMVV 174 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~~~~ 174 (290)
...|.||++...+++|+||||.++|..|+.+++.||+||.+|...+++|.
T Consensus 15 ~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 15 SKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALSG 64 (68)
T ss_dssp SSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCCS
T ss_pred CCCCCCcCcCCCCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEeec
Confidence 46899999999999999999999999999999999999999999888763
No 11
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.00 E-value=1e-10 Score=85.63 Aligned_cols=51 Identities=37% Similarity=0.787 Sum_probs=47.0
Q ss_pred CCCccccccccCcceEeecCCCcccccchhhhhccCCCCCCcchhhccccc
Q psy7970 77 TLDECRICSDLKRDILFQPCGHVACCSVCAPRVKKCLICREPVEKRIKIEE 127 (290)
Q Consensus 77 ~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~i~~ 127 (290)
+...|.||++...+.+++||||.++|..|...+..||+||++|..++++|.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~ 73 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKILM 73 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEECBC
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEEee
Confidence 346899999999999999999999999999999999999999999888763
No 12
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=1.2e-10 Score=85.38 Aligned_cols=50 Identities=38% Similarity=0.796 Sum_probs=46.3
Q ss_pred CCccccccccCcceEeecCCCcccccchhhhhccCCCCCCcchhhccccc
Q psy7970 78 LDECRICSDLKRDILFQPCGHVACCSVCAPRVKKCLICREPVEKRIKIEE 127 (290)
Q Consensus 78 ~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~i~~ 127 (290)
..+|.||++..++.+++||||.++|..|..++..||+||++|..++++|.
T Consensus 25 ~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~ 74 (75)
T 2ecg_A 25 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFM 74 (75)
T ss_dssp HHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBCCC
T ss_pred CCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEEec
Confidence 45799999999999999999999999999999999999999999888763
No 13
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.98 E-value=1.4e-10 Score=82.43 Aligned_cols=50 Identities=22% Similarity=0.550 Sum_probs=44.8
Q ss_pred ccccccccccCCceEEe--CCCCeecchhhHhcCC----CCCCCCcccccccceee
Q psy7970 125 IEECMVCSLKKASVLFK--PCYHMVACESCASLMK----KCVQCRTQIDHMHPMVV 174 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~--PCgH~~~C~~Ca~~~~----~Cp~Cr~~i~~~~~~~~ 174 (290)
...|.||++...+++++ ||||.++|..|+.++. +||+||++|.+.+++|.
T Consensus 7 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~ 62 (63)
T 2vje_B 7 LKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFI 62 (63)
T ss_dssp GSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEEE
T ss_pred CCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEec
Confidence 45899999999888777 9999999999998776 99999999999988874
No 14
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=2e-10 Score=83.14 Aligned_cols=48 Identities=35% Similarity=1.023 Sum_probs=41.7
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC-------CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-------ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-------~CP~CR~~i~~~~ 287 (290)
.+++...|+||++.+.+|+++ |||.||..|+..|. .||+||+++....
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred hCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 456789999999999999775 99999999999875 6999999987654
No 15
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=1.7e-10 Score=83.70 Aligned_cols=50 Identities=26% Similarity=0.587 Sum_probs=42.7
Q ss_pred hccCCCcccccccccccccc--ccCCccchHHHhcC----CCCCCCcccccccccC
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRM----SECPICRKAVEKRILL 289 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~----~~CP~CR~~i~~~~~~ 289 (290)
++++...|+||++.+.+|++ .|||.||..|+..| ..||+||+.+.....+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 66 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPL 66 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCSC
T ss_pred hcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCccccc
Confidence 45678999999999999965 49999999999987 3799999999776554
No 16
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.94 E-value=2.3e-10 Score=93.49 Aligned_cols=48 Identities=29% Similarity=0.815 Sum_probs=41.3
Q ss_pred HhccCCCccccccccccccccc-cCCccchHHHhcCC----CCCCCccccccc
Q psy7970 239 QDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS----ECPICRKAVEKR 286 (290)
Q Consensus 239 ~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~----~CP~CR~~i~~~ 286 (290)
+.+++++.|+||++.+.+|+++ |||.||..|+..|+ .||+||+++...
T Consensus 48 ~~~~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 48 DVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp HHHHHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred HhccccCCCcccCcccCCceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 3456778999999999999775 99999999999874 699999998653
No 17
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.93 E-value=3.2e-10 Score=84.12 Aligned_cols=51 Identities=31% Similarity=0.864 Sum_probs=41.4
Q ss_pred hccCCCcccccccccc--cccc-c--cCCccchHHHhcCC-----CCCCCcccccccccCC
Q psy7970 240 DIKEQTMCPVCLDRLK--NMIF-L--CGHGTCQMCGDRMS-----ECPICRKAVEKRILLY 290 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~--~~v~-~--CGH~fC~~C~~~~~-----~CP~CR~~i~~~~~~y 290 (290)
.++++..||||++.+. ++.+ + |||.||..|+..+| .||.||+++..+..+|
T Consensus 7 ~~~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~ 67 (78)
T 1e4u_A 7 AKEDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPAVY 67 (78)
T ss_dssp CCCCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCSSCC
T ss_pred ccccCCcCCccCccCccccccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCchhh
Confidence 3578899999999884 4444 3 99999999999875 6999999998766554
No 18
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.92 E-value=2.4e-10 Score=91.56 Aligned_cols=50 Identities=30% Similarity=0.644 Sum_probs=43.0
Q ss_pred HHHHhccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCcccccc
Q psy7970 236 QQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEK 285 (290)
Q Consensus 236 ~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~ 285 (290)
..++.+++++.|+||++.+.+|+++ |||+||..|+..|+ .||+||+++..
T Consensus 44 ~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 44 LFLSKVEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHHHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred HHHHhCccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 3455667789999999999999775 99999999998763 79999999966
No 19
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.91 E-value=2.7e-10 Score=81.19 Aligned_cols=50 Identities=28% Similarity=0.575 Sum_probs=44.8
Q ss_pred ccccccccccCCceEEe--CCCCeecchhhHhcCC----CCCCCCcccccccceee
Q psy7970 125 IEECMVCSLKKASVLFK--PCYHMVACESCASLMK----KCVQCRTQIDHMHPMVV 174 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~--PCgH~~~C~~Ca~~~~----~Cp~Cr~~i~~~~~~~~ 174 (290)
..+|.||++...+++|+ ||||.+.|..|+.++. .||+||++|+..+++|+
T Consensus 8 ~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~ 63 (64)
T 2vje_A 8 IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYF 63 (64)
T ss_dssp GSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEEC
T ss_pred cCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeeec
Confidence 45899999999999998 9999999999997664 69999999999988874
No 20
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.90 E-value=3e-10 Score=87.81 Aligned_cols=52 Identities=29% Similarity=0.701 Sum_probs=43.9
Q ss_pred HHHHhccCCCcccccccccccccc-c-cCCccchHHHhcC-----CCCCCCcccccccc
Q psy7970 236 QQLQDIKEQTMCPVCLDRLKNMIF-L-CGHGTCQMCGDRM-----SECPICRKAVEKRI 287 (290)
Q Consensus 236 ~~~~~l~e~~~C~IC~~~~~~~v~-~-CGH~fC~~C~~~~-----~~CP~CR~~i~~~~ 287 (290)
.....+++.+.|+||++.+.+|++ + |||.||..|+..| ..||+||.++....
T Consensus 14 ~~~~~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (100)
T 3lrq_A 14 QSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRE 72 (100)
T ss_dssp HHHHHHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred cccccCCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHH
Confidence 344566788999999999999977 5 9999999999987 37999999986543
No 21
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=4.3e-10 Score=80.04 Aligned_cols=48 Identities=23% Similarity=0.567 Sum_probs=41.5
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~~~ 287 (290)
.+++...|+||++.+.+|+.+ |||.||..|+..|+ .||+||+++....
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 11 TVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp SCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred cCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 346789999999999999765 99999999999763 6999999987764
No 22
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.88 E-value=3.6e-10 Score=88.40 Aligned_cols=56 Identities=27% Similarity=0.813 Sum_probs=46.9
Q ss_pred HHHHHHHHHhccCCCccccccccccccccc-cCCccchHHHhcCC-------CCCCCccccccc
Q psy7970 231 IQKLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-------ECPICRKAVEKR 286 (290)
Q Consensus 231 ~~~l~~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-------~CP~CR~~i~~~ 286 (290)
+++++..++.+++...|+||++.+.+|+++ |||.||..|+..|+ .||+||.++...
T Consensus 8 ~~~~~~~~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 71 (112)
T 1jm7_A 8 VEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKR 71 (112)
T ss_dssp HHHHHHHHHHHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTT
T ss_pred HHHHHHHHHhccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHh
Confidence 445666667778889999999999999775 99999999999762 699999998654
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.87 E-value=4.1e-10 Score=82.19 Aligned_cols=48 Identities=23% Similarity=0.640 Sum_probs=40.7
Q ss_pred hccCCCcccccccccccccc-c-cCCccchHHHhcCC------CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF-L-CGHGTCQMCGDRMS------ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~-~-CGH~fC~~C~~~~~------~CP~CR~~i~~~~ 287 (290)
.+++.+.|+||++.+.+|+. . |||.||..|+..|+ .||+||+++....
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 11 PIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp CSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred cCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 45678999999999999965 6 99999999999873 7999999875543
No 24
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.87 E-value=7.1e-10 Score=103.96 Aligned_cols=58 Identities=34% Similarity=0.936 Sum_probs=53.2
Q ss_pred HHHHHHHhccCCCccccccccccccccc-cCCc-cchHHHhcCCCCCCCcccccccccCC
Q psy7970 233 KLQQQLQDIKEQTMCPVCLDRLKNMIFL-CGHG-TCQMCGDRMSECPICRKAVEKRILLY 290 (290)
Q Consensus 233 ~l~~~~~~l~e~~~C~IC~~~~~~~v~~-CGH~-fC~~C~~~~~~CP~CR~~i~~~~~~y 290 (290)
.++++++.++++..|+||++.+.+++++ |||. ||..|+..+..||+||.+|...+.+|
T Consensus 284 ~~~~~~~~l~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i~ 343 (345)
T 3t6p_A 284 SLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 343 (345)
T ss_dssp CHHHHHHHHHTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGCSBCTTTCCBCCEEEECC
T ss_pred cHHHHHHhCcCCCCCCccCCcCCceEEcCCCChhHhHHHHhcCCcCCCCCCCccCeEEee
Confidence 3667788889999999999999999885 9999 99999999999999999999988887
No 25
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.85 E-value=5.6e-10 Score=84.51 Aligned_cols=45 Identities=24% Similarity=0.716 Sum_probs=39.5
Q ss_pred hccCCCcccccccccccccc-c-cCCccchHHHhcCC------CCCCCccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF-L-CGHGTCQMCGDRMS------ECPICRKAVE 284 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~-~-CGH~fC~~C~~~~~------~CP~CR~~i~ 284 (290)
.+++++.|+||++.+.+|++ . |||+||..|+..|+ .||+||+++.
T Consensus 9 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred cCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 45788999999999999966 6 99999999999773 7999999973
No 26
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.84 E-value=1.2e-09 Score=79.99 Aligned_cols=47 Identities=34% Similarity=0.891 Sum_probs=40.5
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC-----------CCCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-----------SECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-----------~~CP~CR~~i~~~ 286 (290)
.++++..|+||++.+.+|+++ |||.||..|+..| ..||+||+++...
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~ 66 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFE 66 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSS
T ss_pred hcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHh
Confidence 457889999999999999765 9999999999975 2699999998653
No 27
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.84 E-value=1e-09 Score=75.96 Aligned_cols=44 Identities=27% Similarity=0.547 Sum_probs=38.8
Q ss_pred cCCCccccccccccccccc-cCCccchHHHhcC-CCCCCCcccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-SECPICRKAVEK 285 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-~~CP~CR~~i~~ 285 (290)
++.+.|+||++.+.+|+++ |||+||..|+..+ ..||+||+.+..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEeec
Confidence 5678999999999999765 9999999999876 479999999854
No 28
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.82 E-value=8.6e-10 Score=80.91 Aligned_cols=47 Identities=17% Similarity=0.417 Sum_probs=40.7
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC-----CCCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-----SECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-----~~CP~CR~~i~~~ 286 (290)
.+.+++.||||++.+.+|+++ |||+||+.|+..| ..||+||+++...
T Consensus 4 ~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~ 56 (78)
T 1t1h_A 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHA 56 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSC
T ss_pred CCcccCCCCCccccccCCEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChh
Confidence 356789999999999999775 9999999999976 3699999998654
No 29
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.81 E-value=9.7e-10 Score=79.39 Aligned_cols=45 Identities=27% Similarity=0.699 Sum_probs=39.4
Q ss_pred cCCCccccccccccccccc-cCCccchHHHhcCC----CCCCCccccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS----ECPICRKAVEKR 286 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~----~CP~CR~~i~~~ 286 (290)
.+...|+||++.+.+++++ |||.||..|+..|. .||+||+.+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred CCCCCCccCCcccCCCEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 4668999999999999775 99999999999873 699999998654
No 30
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.81 E-value=2.5e-09 Score=84.77 Aligned_cols=52 Identities=21% Similarity=0.521 Sum_probs=44.1
Q ss_pred HHHHHhccCCCcccccccccccccc--ccCCccchHHHhcCC--CCCCCccccccc
Q psy7970 235 QQQLQDIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRMS--ECPICRKAVEKR 286 (290)
Q Consensus 235 ~~~~~~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~~--~CP~CR~~i~~~ 286 (290)
...++.+++.+.|+||++.+.+|++ .|||.||..|+..|+ .||+||.++...
T Consensus 13 ~~~~~~l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~~~ 68 (117)
T 1jm7_B 13 RAALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQ 68 (117)
T ss_dssp HHHHHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCSCS
T ss_pred HHHHHhchhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCccc
Confidence 3455667889999999999999965 499999999999985 699999998543
No 31
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.2e-09 Score=77.87 Aligned_cols=46 Identities=30% Similarity=0.855 Sum_probs=39.1
Q ss_pred ccCCCcccccccccccc-------ccc-cCCccchHHHhcC----CCCCCCccccccc
Q psy7970 241 IKEQTMCPVCLDRLKNM-------IFL-CGHGTCQMCGDRM----SECPICRKAVEKR 286 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~-------v~~-CGH~fC~~C~~~~----~~CP~CR~~i~~~ 286 (290)
+++...|+||++.+.++ +++ |||.||..|+..| ..||+||+++..+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~r 69 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 69 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCCC
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCcC
Confidence 35778999999999987 554 9999999999988 3799999998653
No 32
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=9.7e-10 Score=78.95 Aligned_cols=51 Identities=31% Similarity=0.748 Sum_probs=41.8
Q ss_pred hccCCCccccccccccccccccCCccchHHHhcCC----CCCCCcccccccccCC
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFLCGHGTCQMCGDRMS----ECPICRKAVEKRILLY 290 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~CGH~fC~~C~~~~~----~CP~CR~~i~~~~~~y 290 (290)
++++...|+||++.+.+.++.|||.||..|+..|. .||+||+++......|
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 65 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGANESS 65 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCCCCC
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCCccc
Confidence 34677999999999999333599999999999884 6999999997765543
No 33
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.78 E-value=1.7e-09 Score=80.08 Aligned_cols=44 Identities=23% Similarity=0.533 Sum_probs=38.9
Q ss_pred ccCCCccccccccccccccc-cCCccchHHHhcCC----CCCCCccccc
Q psy7970 241 IKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS----ECPICRKAVE 284 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~----~CP~CR~~i~ 284 (290)
.++.+.|+||++.+.+|+++ |||.||..|+..|+ .||+||+++.
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 12 EEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 35678999999999999775 99999999999874 6999999975
No 34
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.76 E-value=2.1e-09 Score=76.18 Aligned_cols=45 Identities=31% Similarity=0.826 Sum_probs=38.0
Q ss_pred CCCccccccc-cccccc----c-ccCCccchHHHhcC-----CCCCCCcccccccc
Q psy7970 243 EQTMCPVCLD-RLKNMI----F-LCGHGTCQMCGDRM-----SECPICRKAVEKRI 287 (290)
Q Consensus 243 e~~~C~IC~~-~~~~~v----~-~CGH~fC~~C~~~~-----~~CP~CR~~i~~~~ 287 (290)
++..||||++ .+.+|+ + .|||.||..|+.+| ..||+||+++....
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 57 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCcccccc
Confidence 5688999999 899983 3 49999999999987 36999999997643
No 35
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.75 E-value=2.2e-09 Score=77.03 Aligned_cols=46 Identities=30% Similarity=0.855 Sum_probs=39.3
Q ss_pred ccCCCcccccccccccc-------ccc-cCCccchHHHhcC----CCCCCCccccccc
Q psy7970 241 IKEQTMCPVCLDRLKNM-------IFL-CGHGTCQMCGDRM----SECPICRKAVEKR 286 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~-------v~~-CGH~fC~~C~~~~----~~CP~CR~~i~~~ 286 (290)
.+++..|+||++.+.++ +++ |||.||..|+..| ..||+||+++...
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 35678999999999987 554 9999999999987 3799999999654
No 36
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=2.7e-09 Score=79.68 Aligned_cols=46 Identities=30% Similarity=0.932 Sum_probs=39.6
Q ss_pred hccCCCccccccccccc----cccc-cCCccchHHHhcC-------CCCCCCcccccc
Q psy7970 240 DIKEQTMCPVCLDRLKN----MIFL-CGHGTCQMCGDRM-------SECPICRKAVEK 285 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~----~v~~-CGH~fC~~C~~~~-------~~CP~CR~~i~~ 285 (290)
.+++...|+||++.+.+ |+++ |||.||..|+..| ..||+||+++..
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 44678999999999999 8664 9999999999987 479999998854
No 37
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.74 E-value=3.9e-09 Score=78.00 Aligned_cols=47 Identities=36% Similarity=0.817 Sum_probs=40.0
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC----------CCCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM----------SECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~----------~~CP~CR~~i~~~ 286 (290)
.+++...|+||++.+.+|+++ |||.||..|+..| ..||+||+++...
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 346779999999999999765 9999999999864 4799999998653
No 38
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.72 E-value=2e-09 Score=80.95 Aligned_cols=48 Identities=15% Similarity=0.105 Sum_probs=42.4
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC----CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS----ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~----~CP~CR~~i~~~~ 287 (290)
.+.+++.||||++.+.+||++ |||+||+.||..|+ .||+||+++....
T Consensus 10 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~ 62 (85)
T 2kr4_A 10 DAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESM 62 (85)
T ss_dssp TCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGG
T ss_pred cCchheECcccCchhcCCeECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHh
Confidence 456789999999999999886 99999999999884 7999999987654
No 39
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.72 E-value=5e-09 Score=77.43 Aligned_cols=47 Identities=40% Similarity=0.979 Sum_probs=40.4
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC----------CCCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM----------SECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~----------~~CP~CR~~i~~~ 286 (290)
.+++...|+||++.+.+|+++ |||.||..|+..| ..||+||+.+...
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPE 72 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSS
T ss_pred HccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHH
Confidence 446789999999999999765 9999999999874 4799999998654
No 40
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.71 E-value=3.8e-09 Score=82.42 Aligned_cols=49 Identities=29% Similarity=0.642 Sum_probs=42.2
Q ss_pred HHhccCCCcccccccccccccc--ccCCccchHHHhcC----CCCCCCccccccc
Q psy7970 238 LQDIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRM----SECPICRKAVEKR 286 (290)
Q Consensus 238 ~~~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~----~~CP~CR~~i~~~ 286 (290)
++.+++++.|+||++.+.+|++ .|||.||..|+..| ..||+||..+...
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 9 ITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp HHHHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred hhccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3456788999999999999965 49999999999987 4799999998653
No 41
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=3.4e-09 Score=74.50 Aligned_cols=40 Identities=38% Similarity=1.140 Sum_probs=34.9
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC-------CCCCC
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-------ECPIC 279 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-------~CP~C 279 (290)
.++++..|+||++.+.+|+++ |||.||..|+.+|+ .||+|
T Consensus 16 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCBCTTTCSBCSSCEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred hCccCCCCCcCCchhCCeEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 456789999999999999775 99999999999773 69987
No 42
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.69 E-value=3.6e-09 Score=83.40 Aligned_cols=44 Identities=30% Similarity=0.774 Sum_probs=38.7
Q ss_pred cCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCcccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEK 285 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~ 285 (290)
++++.|+||++.+.+|+++ |||+||..|+..|+ .||+||+.+..
T Consensus 13 ~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccCceeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 4568999999999999775 99999999999885 69999999853
No 43
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.68 E-value=5.4e-09 Score=80.72 Aligned_cols=48 Identities=13% Similarity=0.088 Sum_probs=42.4
Q ss_pred hccCCCccccccccccccccc-cC-CccchHHHhcCC----CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CG-HGTCQMCGDRMS----ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CG-H~fC~~C~~~~~----~CP~CR~~i~~~~ 287 (290)
.+.+++.||||++++++||++ || |+||+.||..|+ .||+||+++....
T Consensus 18 ~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~ 71 (98)
T 1wgm_A 18 DACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQ 71 (98)
T ss_dssp SCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTT
T ss_pred cCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhh
Confidence 456789999999999999886 99 999999999886 6999999987654
No 44
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.68 E-value=4.7e-09 Score=81.39 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=42.5
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC----CCCCCcccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS----ECPICRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~----~CP~CR~~i~~~~ 287 (290)
.+.+++.||||++.+.+||++ |||+||+.||..|+ .||+||+++....
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~ 77 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESM 77 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTS
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhh
Confidence 456889999999999999875 99999999999886 6999999987654
No 45
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.68 E-value=3.4e-09 Score=81.36 Aligned_cols=46 Identities=24% Similarity=0.753 Sum_probs=39.4
Q ss_pred hccCCCcccccccccccccc--ccCCccchHHHhcCC----CCCCCcccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRMS----ECPICRKAVEK 285 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~~----~CP~CR~~i~~ 285 (290)
.+++...|+||++.+.+|++ .|||.||..|+..|+ .||+||.++..
T Consensus 18 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 18 TIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred hCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 34567899999999999955 499999999999873 79999999865
No 46
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.67 E-value=4.6e-09 Score=87.17 Aligned_cols=49 Identities=27% Similarity=0.685 Sum_probs=42.0
Q ss_pred HHhccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCccccccc
Q psy7970 238 LQDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEKR 286 (290)
Q Consensus 238 ~~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~~ 286 (290)
++.+++.+.|+||++.+.+|+++ |||+||..|+..|+ .||+||.++...
T Consensus 72 ~~~l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 72 LKKLEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred HHhCccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 34556779999999999999775 99999999999873 699999998765
No 47
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.66 E-value=7.3e-09 Score=71.28 Aligned_cols=40 Identities=38% Similarity=1.045 Sum_probs=34.5
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC-------CCCCCC
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-------SECPIC 279 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-------~~CP~C 279 (290)
.+++...|+||++.+.+|+++ |||.||..|+..| ..||+|
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccccCCCCccCCcccCccEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 346789999999999999775 9999999999987 268887
No 48
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.65 E-value=4.9e-09 Score=73.46 Aligned_cols=44 Identities=32% Similarity=0.877 Sum_probs=37.5
Q ss_pred CCCcccccccccccc-------cc-ccCCccchHHHhcCC----CCCCCccccccc
Q psy7970 243 EQTMCPVCLDRLKNM-------IF-LCGHGTCQMCGDRMS----ECPICRKAVEKR 286 (290)
Q Consensus 243 e~~~C~IC~~~~~~~-------v~-~CGH~fC~~C~~~~~----~CP~CR~~i~~~ 286 (290)
++..|+||++.+.++ ++ .|||.||..|+..|. .||+||+++...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 57 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHK 57 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTT
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCcc
Confidence 568999999999886 44 499999999999873 799999999653
No 49
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.64 E-value=8e-09 Score=73.56 Aligned_cols=46 Identities=33% Similarity=0.813 Sum_probs=38.7
Q ss_pred cCCCcccccccccccc-cc-ccCCccchHHHhcC----CCCCCCcccccccc
Q psy7970 242 KEQTMCPVCLDRLKNM-IF-LCGHGTCQMCGDRM----SECPICRKAVEKRI 287 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~-v~-~CGH~fC~~C~~~~----~~CP~CR~~i~~~~ 287 (290)
++...|+||++.+.++ ++ .|||.||..|+..| ..||+||+++....
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 54 (68)
T 1chc_A 3 TVAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESVV 54 (68)
T ss_dssp CCCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCCEE
T ss_pred CCCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHhhh
Confidence 4678999999999997 44 49999999999987 47999999986543
No 50
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.63 E-value=6.4e-09 Score=82.10 Aligned_cols=46 Identities=28% Similarity=0.543 Sum_probs=39.5
Q ss_pred cCCCccccccccccccccc-cCCccchHHHhcC-----CCCCCCcccccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-----SECPICRKAVEKRI 287 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-----~~CP~CR~~i~~~~ 287 (290)
++++.|+||++.+.+|+.+ |||.||..|+..| ..||+||.++....
T Consensus 21 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 72 (116)
T 1rmd_A 21 VKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTD 72 (116)
T ss_dssp HHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGG
T ss_pred cCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhh
Confidence 4568999999999999775 9999999999976 36999999986543
No 51
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.63 E-value=6.7e-09 Score=82.42 Aligned_cols=47 Identities=26% Similarity=0.711 Sum_probs=41.2
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcC-----CCCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-----SECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-----~~CP~CR~~i~~~ 286 (290)
.+++.+.|+||++.+.+|+++ |||.||..|+..| ..||+||.++...
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHH
Confidence 456789999999999999775 9999999999987 3899999998764
No 52
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.61 E-value=1.2e-08 Score=74.79 Aligned_cols=47 Identities=26% Similarity=0.547 Sum_probs=38.8
Q ss_pred ccCCCcccccccccccc---c-cccCCccchHHHhcC----CCCCCCcccccccc
Q psy7970 241 IKEQTMCPVCLDRLKNM---I-FLCGHGTCQMCGDRM----SECPICRKAVEKRI 287 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~---v-~~CGH~fC~~C~~~~----~~CP~CR~~i~~~~ 287 (290)
+++...|+||++.+.++ + +.|||.||..|+..| ..||+||+.+....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 35678999999998866 2 249999999999987 37999999987654
No 53
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.60 E-value=1.7e-08 Score=68.79 Aligned_cols=44 Identities=36% Similarity=0.848 Sum_probs=37.1
Q ss_pred ccCCCccccccccccc---c-ccc-cCCccchHHHhcCC----CCCCCccccc
Q psy7970 241 IKEQTMCPVCLDRLKN---M-IFL-CGHGTCQMCGDRMS----ECPICRKAVE 284 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~---~-v~~-CGH~fC~~C~~~~~----~CP~CR~~i~ 284 (290)
++++..|+||++.+.+ + +++ |||.||..|+..|. .||+||+++.
T Consensus 2 ~~~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 4678899999999988 4 445 99999999999884 7999998763
No 54
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=1.7e-08 Score=73.12 Aligned_cols=48 Identities=25% Similarity=0.585 Sum_probs=39.3
Q ss_pred ccCCCcccccccccccc-cc---ccCCccchHHHhcC----CCCCCCccccccccc
Q psy7970 241 IKEQTMCPVCLDRLKNM-IF---LCGHGTCQMCGDRM----SECPICRKAVEKRIL 288 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~-v~---~CGH~fC~~C~~~~----~~CP~CR~~i~~~~~ 288 (290)
++++..|+||++.+.++ .+ .|||.||..|+..| ..||+||+++.....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQLAQ 67 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSCCS
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccccc
Confidence 45678999999999876 22 59999999999987 379999999866443
No 55
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.56 E-value=2.9e-08 Score=92.99 Aligned_cols=52 Identities=33% Similarity=0.864 Sum_probs=47.4
Q ss_pred CCCCccccccccCcceEeecCCCcccccchhhhhccCCCCCCcchhhccccc
Q psy7970 76 VTLDECRICSDLKRDILFQPCGHVACCSVCAPRVKKCLICREPVEKRIKIEE 127 (290)
Q Consensus 76 ~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~~Cp~Cr~~i~~~~~i~~ 127 (290)
.+...|.||++...+.+++||||.++|..|+..+..||+||.+|..++++|.
T Consensus 293 ~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~~~~CP~CR~~i~~~~~i~~ 344 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTFL 344 (345)
T ss_dssp HTTCBCTTTSSSBCCEEEETTCCEEECTTTGGGCSBCTTTCCBCCEEEECC-
T ss_pred cCCCCCCccCCcCCceEEcCCCChhHhHHHHhcCCcCCCCCCCccCeEEeec
Confidence 3456899999999999999999999999999999999999999999988763
No 56
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.55 E-value=2e-08 Score=68.30 Aligned_cols=42 Identities=29% Similarity=0.788 Sum_probs=35.6
Q ss_pred CCCccccccccccc----ccc-ccCCccchHHHhcC----CCCCCCccccc
Q psy7970 243 EQTMCPVCLDRLKN----MIF-LCGHGTCQMCGDRM----SECPICRKAVE 284 (290)
Q Consensus 243 e~~~C~IC~~~~~~----~v~-~CGH~fC~~C~~~~----~~CP~CR~~i~ 284 (290)
++..|+||++.+.+ +++ .|||.||..|+..| ..||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 56889999999866 444 49999999999988 47999999875
No 57
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.55 E-value=6.4e-09 Score=85.47 Aligned_cols=45 Identities=22% Similarity=0.670 Sum_probs=39.8
Q ss_pred HhccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCcccc
Q psy7970 239 QDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAV 283 (290)
Q Consensus 239 ~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i 283 (290)
+.+++++.|+||++.+.+|+.+ |||.||..|+..|+ .||+||.++
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHGGGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHHHhcCCCCCCCCCCcc
Confidence 3567889999999999999775 99999999999873 699999975
No 58
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.52 E-value=1.4e-08 Score=85.17 Aligned_cols=48 Identities=40% Similarity=0.806 Sum_probs=39.7
Q ss_pred HHhccCCCcccccccccccccc--ccCCccchHHHhcCC-----CCCCCcccccc
Q psy7970 238 LQDIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRMS-----ECPICRKAVEK 285 (290)
Q Consensus 238 ~~~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~~-----~CP~CR~~i~~ 285 (290)
.+.+++.+.|+||++.+.+|++ .|||.||..|+..|+ .||+||.++..
T Consensus 48 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 48 PRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp --CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred hhhCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 3455677899999999999965 499999999999873 59999999854
No 59
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.46 E-value=6e-08 Score=69.22 Aligned_cols=46 Identities=33% Similarity=0.737 Sum_probs=37.1
Q ss_pred cCCCccccccccccc---ccc-ccCCccchHHHhcC----CCCCCCcccccccc
Q psy7970 242 KEQTMCPVCLDRLKN---MIF-LCGHGTCQMCGDRM----SECPICRKAVEKRI 287 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~---~v~-~CGH~fC~~C~~~~----~~CP~CR~~i~~~~ 287 (290)
++...|+||++.+.+ +++ .|||.||..|+..| ..||+||..+....
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 65 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQL 65 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSCC
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCcC
Confidence 467899999998854 233 49999999999987 47999999986543
No 60
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=3.7e-08 Score=75.20 Aligned_cols=47 Identities=26% Similarity=0.482 Sum_probs=39.2
Q ss_pred hccCCCcccccccccccccc-c-cCCccchHHHhcCC----------CCCC--Cccc-cccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF-L-CGHGTCQMCGDRMS----------ECPI--CRKA-VEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~-~-CGH~fC~~C~~~~~----------~CP~--CR~~-i~~~ 286 (290)
...+++.||||++.+.+||+ . |||+||+.||..|+ .||+ |++. +...
T Consensus 3 ~~~~~~~CPI~~~~~~dPV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~ 64 (94)
T 2yu4_A 3 SGSSGFTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKS 64 (94)
T ss_dssp SCSSCCBCTTTCSBCSSEEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGG
T ss_pred CCCcEeECcCcCchhcCCEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHh
Confidence 34678999999999999977 4 99999999999773 7999 9876 5443
No 61
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.44 E-value=3.7e-08 Score=82.85 Aligned_cols=47 Identities=26% Similarity=0.699 Sum_probs=41.4
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEKR 286 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~~ 286 (290)
.+++.+.|+||++.+.+|+.. |||+||..|+..|+ .||+||.++...
T Consensus 14 ~~~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 66 (170)
T 3hcs_A 14 PLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLEN 66 (170)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCChhhcCcEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchh
Confidence 456789999999999999775 99999999999873 899999998664
No 62
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=98.41 E-value=4.4e-08 Score=76.82 Aligned_cols=44 Identities=23% Similarity=0.637 Sum_probs=35.9
Q ss_pred CCCccccccccccccc------------------c-ccCCccchHHHhcCC---------CCCCCccccccc
Q psy7970 243 EQTMCPVCLDRLKNMI------------------F-LCGHGTCQMCGDRMS---------ECPICRKAVEKR 286 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v------------------~-~CGH~fC~~C~~~~~---------~CP~CR~~i~~~ 286 (290)
.+..|+||++.+.++. + .|||.||..|+..|. .||+||..+..+
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 3469999999997653 3 499999999999874 699999988543
No 63
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.41 E-value=6.1e-08 Score=73.40 Aligned_cols=44 Identities=23% Similarity=0.551 Sum_probs=36.9
Q ss_pred cCCCccccccccccc---ccc-ccCCccchHHHhcC----CCCCCCcccccc
Q psy7970 242 KEQTMCPVCLDRLKN---MIF-LCGHGTCQMCGDRM----SECPICRKAVEK 285 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~---~v~-~CGH~fC~~C~~~~----~~CP~CR~~i~~ 285 (290)
+++..|+||++.+.+ ++. .|||.||..|+..| ..||+||..+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 567899999998877 433 59999999999987 379999998864
No 64
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.41 E-value=5.9e-08 Score=70.55 Aligned_cols=44 Identities=34% Similarity=0.727 Sum_probs=37.2
Q ss_pred cCCCcccccccccccc---cc-ccCCccchHHHhcC----CCCCCCcccccc
Q psy7970 242 KEQTMCPVCLDRLKNM---IF-LCGHGTCQMCGDRM----SECPICRKAVEK 285 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~---v~-~CGH~fC~~C~~~~----~~CP~CR~~i~~ 285 (290)
+++..|+||++.+.++ +. .|||.||..|+..| ..||+||+.+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 4678999999998876 33 49999999999988 479999998864
No 65
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.39 E-value=2.3e-07 Score=66.67 Aligned_cols=49 Identities=31% Similarity=0.743 Sum_probs=41.8
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh----ccCCCCCCcchhh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV----KKCLICREPVEKR 122 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~ 122 (290)
....+...|.||++...+.+++||||. +|..|.... ..||+||..+...
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (71)
T 2d8t_A 10 APSLTVPECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEIPED 62 (71)
T ss_dssp CSSSSCCBCSSSSSBCSSEEEETTTEE-EEHHHHHHCTTCSSBCSSSCCBCCHH
T ss_pred ccCCCCCCCccCCcccCCCEEccCCCH-HHHHHHHHHHHCCCcCcCcCchhCHh
Confidence 445666789999999999999999999 799998764 6899999998653
No 66
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.37 E-value=7.7e-08 Score=86.12 Aligned_cols=46 Identities=7% Similarity=0.043 Sum_probs=40.0
Q ss_pred cCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCcccccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEKRI 287 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~~~ 287 (290)
.+.+.||||++.+.+||++ |||+||+.||..|+ .||+||.++....
T Consensus 206 ~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~ 257 (281)
T 2c2l_A 206 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQ 257 (281)
T ss_dssp CSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGG
T ss_pred CcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhc
Confidence 3578999999999999885 99999999999773 4999999997654
No 67
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.29 E-value=3.2e-07 Score=86.89 Aligned_cols=51 Identities=24% Similarity=0.586 Sum_probs=42.1
Q ss_pred HhccCCCccccccccccccccc-cCCccchHHHhcC-----CCCCCCcccccccccC
Q psy7970 239 QDIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRM-----SECPICRKAVEKRILL 289 (290)
Q Consensus 239 ~~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~-----~~CP~CR~~i~~~~~~ 289 (290)
+..+....|+||++.+.+|++. |||.||..|+..| ..||+||+++.....+
T Consensus 327 e~~~~~~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 327 EMGSTFQLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp HTTTSSSBCTTTSSSBCCEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEEEEC
T ss_pred hhcCCCCCCCccCcCCCCeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCceeE
Confidence 3445568999999999999774 9999999999865 4799999999775543
No 68
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.25 E-value=2e-07 Score=79.48 Aligned_cols=49 Identities=10% Similarity=0.099 Sum_probs=41.7
Q ss_pred hccCCCccccccccccccccc-cCCccchHHHhcCC-----CCCCCccccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CGHGTCQMCGDRMS-----ECPICRKAVEKRIL 288 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CGH~fC~~C~~~~~-----~CP~CR~~i~~~~~ 288 (290)
.+.+.+.||||++.+.+||++ |||+||+.||..|+ .||+||.++....+
T Consensus 102 ~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L 156 (179)
T 2f42_A 102 EIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQL 156 (179)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGC
T ss_pred CCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhC
Confidence 345679999999999999885 99999999999873 59999999876543
No 69
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=9.9e-07 Score=63.30 Aligned_cols=48 Identities=29% Similarity=0.693 Sum_probs=40.9
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhhc-------cCCCCCCcchh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRVK-------KCLICREPVEK 121 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~~-------~Cp~Cr~~i~~ 121 (290)
.+..+...|.||++...+.+++||||. +|..|..... .||+||+++..
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCE-EEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCCh-hhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 445667799999999999999999999 7999997653 79999998864
No 70
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.17 E-value=4.1e-07 Score=81.68 Aligned_cols=48 Identities=21% Similarity=0.362 Sum_probs=41.1
Q ss_pred hccCCCcccccccccccccc--ccCCccchHHHhcCC------CCCC--Ccccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRMS------ECPI--CRKAVEKRI 287 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~~------~CP~--CR~~i~~~~ 287 (290)
....++.||||++.+.+||+ .|||+||+.||..|| .||+ ||+.+....
T Consensus 177 ~~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~d 234 (267)
T 3htk_C 177 GGKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRD 234 (267)
T ss_dssp SSBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGG
T ss_pred CCceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhh
Confidence 34678999999999999986 399999999999875 5999 999886544
No 71
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=8.1e-07 Score=62.82 Aligned_cols=49 Identities=31% Similarity=0.634 Sum_probs=39.5
Q ss_pred CCCCCCCCccccccccCcce-------EeecCCCcccccchhhhh----ccCCCCCCcchh
Q psy7970 72 TEDMVTLDECRICSDLKRDI-------LFQPCGHVACCSVCAPRV----KKCLICREPVEK 121 (290)
Q Consensus 72 ~~~~~~~~~C~iC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~ 121 (290)
.....+...|.||++...+. +++||||. +|..|.... ..||+||+++..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 9 GLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp CCCTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCE-EEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred ccCCCCCCCCcccCccccccccccCCeEeCCCCCh-hcHHHHHHHHHcCCCCCCCCCccCc
Confidence 34556678999999987665 88999995 699999764 589999998864
No 72
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.16 E-value=5e-07 Score=64.49 Aligned_cols=50 Identities=32% Similarity=0.762 Sum_probs=41.6
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh----ccCCCCCCcchhhcc
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV----KKCLICREPVEKRIK 124 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~ 124 (290)
.+..+...|.||++...+ +++||||. +|..|.... ..||+||.++.....
T Consensus 10 ~~~~~~~~C~IC~~~~~~-~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 63 (70)
T 2ecn_A 10 KQLTDEEECCICMDGRAD-LILPCAHS-FCQKCIDKWSDRHRNCPICRLQMTGANE 63 (70)
T ss_dssp CCCCCCCCCSSSCCSCCS-EEETTTEE-ECHHHHHHSSCCCSSCHHHHHCTTCCCC
T ss_pred hcCCCCCCCeeCCcCccC-cccCCCCc-ccHHHHHHHHHCcCcCCCcCCcccCCCc
Confidence 345667899999999999 88999999 799999764 689999998876543
No 73
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=7.6e-07 Score=65.89 Aligned_cols=44 Identities=20% Similarity=0.611 Sum_probs=34.8
Q ss_pred CCCccccccccccc--------------c-ccc-cCCccchHHHhcCC----CCCCCccccccc
Q psy7970 243 EQTMCPVCLDRLKN--------------M-IFL-CGHGTCQMCGDRMS----ECPICRKAVEKR 286 (290)
Q Consensus 243 e~~~C~IC~~~~~~--------------~-v~~-CGH~fC~~C~~~~~----~CP~CR~~i~~~ 286 (290)
++..|+||++.+.+ + +++ |||.|+..|+.+|. .||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 45678898888865 2 334 99999999999873 699999988543
No 74
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.09 E-value=1.8e-06 Score=61.08 Aligned_cols=47 Identities=32% Similarity=0.774 Sum_probs=39.5
Q ss_pred CCCccccccccCcc-eEeecCCCcccccchhhhh----ccCCCCCCcchhhcc
Q psy7970 77 TLDECRICSDLKRD-ILFQPCGHVACCSVCAPRV----KKCLICREPVEKRIK 124 (290)
Q Consensus 77 ~~~~C~iC~~~~~~-~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~ 124 (290)
+...|.||++...+ ++++||||. +|..|.... ..||+||+++.....
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 55 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHA-FCYVCITRWIRQNPTCPLCKVPVESVVH 55 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEE-ESTTHHHHHHHHSCSTTTTCCCCCCEEC
T ss_pred CCCCCeeCCccccCCcEecCCCCe-eHHHHHHHHHhCcCcCcCCChhhHhhhh
Confidence 45689999999988 689999999 799999753 689999999876544
No 75
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.08 E-value=3.2e-06 Score=62.10 Aligned_cols=48 Identities=27% Similarity=0.610 Sum_probs=40.4
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh----ccCCCCCCcchh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV----KKCLICREPVEK 121 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~ 121 (290)
.+..+...|.||++...+.+++||||.. |..|.... ..||+||+++..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 10 EEEEIPFRCFICRQAFQNPVVTKCRHYF-CESCALEHFRATPRCYICDQPTGG 61 (81)
T ss_dssp SCCCCCSBCSSSCSBCCSEEECTTSCEE-EHHHHHHHHHHCSBCSSSCCBCCS
T ss_pred ccCCCCCCCcCCCchhcCeeEccCCCHh-HHHHHHHHHHCCCcCCCcCccccc
Confidence 3455567899999999999999999985 99999764 579999999863
No 76
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.00 E-value=4.6e-06 Score=56.33 Aligned_cols=44 Identities=25% Similarity=0.634 Sum_probs=36.3
Q ss_pred CCCCccccccccCcc----eEeecCCCcccccchhhhh----ccCCCCCCcch
Q psy7970 76 VTLDECRICSDLKRD----ILFQPCGHVACCSVCAPRV----KKCLICREPVE 120 (290)
Q Consensus 76 ~~~~~C~iC~~~~~~----~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~ 120 (290)
.+...|.||++...+ .+++||||. +|..|.... ..||+||.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHL-LHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCE-EETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCc-ccHHHHHHHHHcCCcCCCCCCcCC
Confidence 345789999998755 889999995 799999765 68999999875
No 77
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.99 E-value=7.6e-06 Score=59.94 Aligned_cols=48 Identities=27% Similarity=0.614 Sum_probs=40.5
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhh----------hccCCCCCCcchh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPR----------VKKCLICREPVEK 121 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~----------~~~Cp~Cr~~i~~ 121 (290)
.+..+...|.||++...+.+.+||||. +|..|... ...||+||+.+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHS-FCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCC-BCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCH-HHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 455667899999999999999999998 69999865 3589999998864
No 78
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=97.98 E-value=2.8e-06 Score=61.79 Aligned_cols=50 Identities=24% Similarity=0.544 Sum_probs=41.1
Q ss_pred CCCCCCCCCccccccccCcceEeecCCCcccccchhhh-----------hccCCCCCCcchh
Q psy7970 71 GTEDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPR-----------VKKCLICREPVEK 121 (290)
Q Consensus 71 ~~~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~-----------~~~Cp~Cr~~i~~ 121 (290)
...+..+...|.||++...+.+.+||||. +|..|..+ ...||+||+++..
T Consensus 5 ~~~~~~~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 5 SSGNVQEEVTCPICLELLTEPLSLDCGHS-LCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp SSCCCCCCCEETTTTEECSSCCCCSSSCC-CCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hHhhcccCCCCcCCCcccCCeeECCCCCH-HHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 33456677899999999999888999997 59999874 3579999998864
No 79
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.98 E-value=6.5e-06 Score=60.95 Aligned_cols=49 Identities=22% Similarity=0.605 Sum_probs=40.3
Q ss_pred CCCCCCCCccccccccCcc----eEeecCCCcccccchhhhh-------ccCCCCCCcchh
Q psy7970 72 TEDMVTLDECRICSDLKRD----ILFQPCGHVACCSVCAPRV-------KKCLICREPVEK 121 (290)
Q Consensus 72 ~~~~~~~~~C~iC~~~~~~----~~~~PCgH~~~C~~Ca~~~-------~~Cp~Cr~~i~~ 121 (290)
.....+..+|.||++...+ .+++||||. +|..|.... ..||+||+.+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 9 LDALREVLECPICMESFTEEQLRPKLLHCGHT-ICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp CCCCCSCCBCTTTCCBCCTTSSCEEECSSSCE-EEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred hhhccCCCCCccCCccccccCCCeEECCCCCh-hhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 3455667899999999888 889999997 599999764 589999998754
No 80
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.98 E-value=8.4e-06 Score=59.71 Aligned_cols=48 Identities=27% Similarity=0.614 Sum_probs=40.3
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhh----------hccCCCCCCcchh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPR----------VKKCLICREPVEK 121 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~----------~~~Cp~Cr~~i~~ 121 (290)
.+..+...|.||++...+.+++||||. +|..|... ...||+||..+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHS-FCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCC-BCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCH-HHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 445667799999999999999999997 69999865 4579999998864
No 81
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=97.98 E-value=3.3e-06 Score=62.22 Aligned_cols=51 Identities=31% Similarity=0.670 Sum_probs=40.5
Q ss_pred CCCCCCCccccccccC--cceEeec--CCCcccccchhhhh-----ccCCCCCCcchhhcc
Q psy7970 73 EDMVTLDECRICSDLK--RDILFQP--CGHVACCSVCAPRV-----KKCLICREPVEKRIK 124 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~--~~~~~~P--CgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~~~~ 124 (290)
.+..+...|.||++.. .+.++.| |||. +|..|..++ ..||+||+++.....
T Consensus 6 ~~~~~~~~CpICle~~~~~d~~~~p~~CGH~-fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~ 65 (78)
T 1e4u_A 6 DAKEDPVECPLCMEPLEIDDINFFPCTCGYQ-ICRFCWHRIRTDENGLCPACRKPYPEDPA 65 (78)
T ss_dssp CCCCCCCBCTTTCCBCCTTTTTCCSSTTSCC-CCHHHHHHHTTSSCSBCTTTCCBCSSCSS
T ss_pred cccccCCcCCccCccCccccccccccCCCCC-cCHHHHHHHHhcCCCCCCCCCCccCCCch
Confidence 3456667899999976 4567777 9998 699999876 389999999976543
No 82
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=97.96 E-value=6.6e-06 Score=58.37 Aligned_cols=51 Identities=33% Similarity=0.695 Sum_probs=39.5
Q ss_pred CCCCCCCccccccccC---cceEeecCCCcccccchhhhh----ccCCCCCCcchhhcc
Q psy7970 73 EDMVTLDECRICSDLK---RDILFQPCGHVACCSVCAPRV----KKCLICREPVEKRIK 124 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~---~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~ 124 (290)
.+......|.||++.. ..++.+||||. +|..|.... ..||+||..+...+.
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRLPCMHL-FHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CcCCCCCCCeeCCccccCCCcEEEeCCCCH-HHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 3445567899997654 56788999999 699998753 689999999876543
No 83
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.94 E-value=1.1e-05 Score=58.69 Aligned_cols=49 Identities=22% Similarity=0.554 Sum_probs=38.0
Q ss_pred CCCCCCCccccccccC---cceEeecCCCcccccchhhhh----ccCCCCCCcchhh
Q psy7970 73 EDMVTLDECRICSDLK---RDILFQPCGHVACCSVCAPRV----KKCLICREPVEKR 122 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~---~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~ 122 (290)
....+..+|.||++.. ..+..+||||. +|..|.... ..||+||..+...
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCNHL-FHDSCIVPWLEQHDSCPVCRKSLTGQ 65 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTSCE-EETTTTHHHHTTTCSCTTTCCCCCCS
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCCCe-ecHHHHHHHHHcCCcCcCcCCccCCc
Confidence 4455667999997654 45577899997 799998753 6899999998754
No 84
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.91 E-value=9.1e-06 Score=58.31 Aligned_cols=49 Identities=24% Similarity=0.516 Sum_probs=40.2
Q ss_pred CCCCCCCccccccccCcceEee-cCCCcccccchhhhh----ccCCCCCCcchhh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQ-PCGHVACCSVCAPRV----KKCLICREPVEKR 122 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~ 122 (290)
.+..+...|.||++...+.+.+ ||||.. |..|.... ..||+||.++...
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~f-C~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTF-CKSCIVRHFYYSNRCPKCNIVVHQT 63 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEE-CHHHHHHHHHHCSSCTTTCCCCCSS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHH-HHHHHHHHHHcCCcCCCcCcccCcc
Confidence 4556677899999999987776 999985 99998653 6899999998754
No 85
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.88 E-value=6e-06 Score=56.60 Aligned_cols=45 Identities=27% Similarity=0.589 Sum_probs=38.0
Q ss_pred CCCCccccccccCcceEeecCCCcccccchhhhh-ccCCCCCCcchh
Q psy7970 76 VTLDECRICSDLKRDILFQPCGHVACCSVCAPRV-KKCLICREPVEK 121 (290)
Q Consensus 76 ~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~-~~Cp~Cr~~i~~ 121 (290)
.+...|.||++...+.+.+||||. +|..|.... ..||+||+.+..
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHT-LCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCC-SBTTTCSSSSSSCSSCCSSSSC
T ss_pred ccCCCceEeCCccCCeEEcCCCCc-ccHHHHccCCCCCCcCCcEeec
Confidence 455679999999999999999997 589998654 689999998764
No 86
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.88 E-value=6.7e-06 Score=57.93 Aligned_cols=48 Identities=25% Similarity=0.571 Sum_probs=40.2
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh-----ccCCCCCCcchh
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV-----KKCLICREPVEK 121 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 121 (290)
....+...|.||++...+.+.+||||. +|..|.... ..||+||+++..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHR-FCESCMAALLSSSSPKCTACQESIVK 62 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCC-CCHHHHHHHHTTSSCCCTTTCCCCCT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCH-HHHHHHHHHHHhCcCCCCCCCcCCCh
Confidence 345666789999999999888999999 599998754 479999999865
No 87
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=97.85 E-value=9.4e-06 Score=65.85 Aligned_cols=43 Identities=26% Similarity=0.569 Sum_probs=37.1
Q ss_pred cccccccccCCceEEeCCCCeecchhhHhc----CCCCCCCCcccccc
Q psy7970 126 EECMVCSLKKASVLFKPCYHMVACESCASL----MKKCVQCRTQIDHM 169 (290)
Q Consensus 126 ~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~~ 169 (290)
..|.||++...+.+++||||. +|..|... ...||.||.+|...
T Consensus 54 ~~C~iC~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 100 (138)
T 4ayc_A 54 LQCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIKSK 100 (138)
T ss_dssp SBCTTTCSBCSSEEEETTSCE-EEHHHHHHHTTTCSBCTTTCCBCCCE
T ss_pred CCCcccCcccCCceECCCCCC-ccHHHHHHHHHcCCcCCCCCCcCCCC
Confidence 369999999999999999997 99999964 46899999998654
No 88
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.85 E-value=3e-06 Score=64.21 Aligned_cols=41 Identities=24% Similarity=0.590 Sum_probs=33.8
Q ss_pred cCCCcccccccccccccc----ccCCccchHHHhcC------------CCCCC--Cccc
Q psy7970 242 KEQTMCPVCLDRLKNMIF----LCGHGTCQMCGDRM------------SECPI--CRKA 282 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~----~CGH~fC~~C~~~~------------~~CP~--CR~~ 282 (290)
.+...|+||++.+.++.+ .|||.||..|+..+ ..||. |+..
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp CSBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 356899999999988833 39999999999854 25999 9988
No 89
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=97.83 E-value=1.4e-05 Score=53.90 Aligned_cols=44 Identities=32% Similarity=0.594 Sum_probs=35.6
Q ss_pred CCCCccccccccCcc---eEeec-CCCcccccchhhhh----ccCCCCCCcch
Q psy7970 76 VTLDECRICSDLKRD---ILFQP-CGHVACCSVCAPRV----KKCLICREPVE 120 (290)
Q Consensus 76 ~~~~~C~iC~~~~~~---~~~~P-CgH~~~C~~Ca~~~----~~Cp~Cr~~i~ 120 (290)
.+..+|.||++...+ .+.+| |||. +|..|.... ..||+||.++.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~C~H~-f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 3 DDGVECAVCLAELEDGEEARFLPRCGHG-FHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCE-ECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCcCccCCccccCCCceEECCCCCCc-ccHHHHHHHHHcCCcCcCCCCEeE
Confidence 456789999998776 77777 9997 699998753 68999998764
No 90
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.80 E-value=9.9e-06 Score=58.53 Aligned_cols=47 Identities=21% Similarity=0.477 Sum_probs=36.8
Q ss_pred CCCCCCccccccccCcc---eEeecCCCcccccchhhhh----ccCCCCCCcchh
Q psy7970 74 DMVTLDECRICSDLKRD---ILFQPCGHVACCSVCAPRV----KKCLICREPVEK 121 (290)
Q Consensus 74 ~~~~~~~C~iC~~~~~~---~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~ 121 (290)
...+..+|.||++...+ ++.+||||. +|..|.... ..||+||+++..
T Consensus 19 ~~~~~~~C~IC~~~~~~~~~~~~l~C~H~-fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 19 HQSEQTLCVVCMCDFESRQLLRVLPCNHE-FHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp CSSSCCEETTTTEECCBTCEEEEETTTEE-EETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred ccCCCCCCeECCcccCCCCeEEEECCCCH-hHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 34566789999966443 588899998 799998754 589999998864
No 91
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.80 E-value=1.1e-05 Score=57.97 Aligned_cols=52 Identities=21% Similarity=0.506 Sum_probs=39.8
Q ss_pred CCCCCCCCccccccccC---cceEeecCCCcccccchhhhh----ccCCCCCCcchhhcc
Q psy7970 72 TEDMVTLDECRICSDLK---RDILFQPCGHVACCSVCAPRV----KKCLICREPVEKRIK 124 (290)
Q Consensus 72 ~~~~~~~~~C~iC~~~~---~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~ 124 (290)
..+......|.||++.. ..+..+||||. +|..|.... ..||+||.++.....
T Consensus 9 ~~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~-f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 67 (74)
T 2ep4_A 9 VKELNLHELCAVCLEDFKPRDELGICPCKHA-FHRKCLIKWLEVRKVCPLCNMPVLQLAQ 67 (74)
T ss_dssp CCCCCCSCBCSSSCCBCCSSSCEEEETTTEE-EEHHHHHHHHHHCSBCTTTCCBCSSCCS
T ss_pred cccCCCCCCCcCCCcccCCCCcEEEcCCCCE-ecHHHHHHHHHcCCcCCCcCcccccccc
Confidence 34556678999999885 34566699998 789998653 589999999876543
No 92
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=97.79 E-value=5.5e-06 Score=58.90 Aligned_cols=46 Identities=33% Similarity=0.705 Sum_probs=37.6
Q ss_pred CCCCCccccccccCcce-------EeecCCCcccccchhhhh----ccCCCCCCcchh
Q psy7970 75 MVTLDECRICSDLKRDI-------LFQPCGHVACCSVCAPRV----KKCLICREPVEK 121 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~-------~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~ 121 (290)
..+...|.||++...+. +++||||. +|..|.... ..||+||.++..
T Consensus 7 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 63 (71)
T 3ng2_A 7 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 63 (71)
T ss_dssp CTTCCBCTTTCCBHHHHHTTTCCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCC
T ss_pred CCCCCCCcccChhhhccccccCCeEeCCCCCh-HhHHHHHHHHHcCCCCCCCCCccCh
Confidence 34567899999987664 88999997 699998654 699999998864
No 93
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.74 E-value=2.3e-05 Score=53.36 Aligned_cols=42 Identities=26% Similarity=0.773 Sum_probs=34.7
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh-------ccCCCC
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV-------KKCLIC 115 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~Cp~C 115 (290)
....+...|.||++...+.+.+||||. +|..|.... ..||+|
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKEPVIIECGHN-FCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp SCSCCCCBCSSSCCBCSSCCCCSSCCC-CCHHHHHHHTTSSCCSCCCSCC
T ss_pred hccccCCCCccCCcccCccEeCCCCCc-cCHHHHHHHHHhcCCCCCCCCC
Confidence 445667799999999999999999999 699998754 467776
No 94
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=97.72 E-value=3.3e-05 Score=55.75 Aligned_cols=47 Identities=26% Similarity=0.641 Sum_probs=39.3
Q ss_pred CCCCCCCccccccccCcceEeec-CCCcccccchhhhh------ccCCCCCCcch
Q psy7970 73 EDMVTLDECRICSDLKRDILFQP-CGHVACCSVCAPRV------KKCLICREPVE 120 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~P-CgH~~~C~~Ca~~~------~~Cp~Cr~~i~ 120 (290)
.+..+...|.||++...+.+.+| |||. +|..|.... ..||+||+++.
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 10 DPIPDELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp CCSCGGGSCSSSCCCCTTCEECSSSCCE-ECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred ccCCCCCCCcCCChHHhCCeEcCCCCCH-HHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 45566679999999999999999 9997 599998654 37999999754
No 95
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.70 E-value=1.2e-05 Score=62.69 Aligned_cols=42 Identities=21% Similarity=0.600 Sum_probs=34.0
Q ss_pred CCCcccccccccccc------------------cc-ccCCccchHHHhcC----CCCCCCccccc
Q psy7970 243 EQTMCPVCLDRLKNM------------------IF-LCGHGTCQMCGDRM----SECPICRKAVE 284 (290)
Q Consensus 243 e~~~C~IC~~~~~~~------------------v~-~CGH~fC~~C~~~~----~~CP~CR~~i~ 284 (290)
++..|+||++.+.++ ++ .|||.|+..|+..| ..||+||+.+.
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCcce
Confidence 346799999988765 22 39999999999987 37999999864
No 96
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=97.66 E-value=1.5e-05 Score=55.20 Aligned_cols=41 Identities=27% Similarity=0.724 Sum_probs=31.3
Q ss_pred ccccccccCCc-------eEEeCCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 127 ECMVCSLKKAS-------VLFKPCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 127 ~C~~C~~~~~~-------~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
.|.||++...+ ++.+||||. +|..|..+ ...||.||.++..
T Consensus 5 ~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 5 SCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 56 (64)
T ss_dssp BCTTTCCBHHHHHHTTCCEEEETTSCE-EEHHHHHHHHHHCSBCTTTCCBCTT
T ss_pred CCCccChhhhCccccCCCEEeCCCCCc-hhHHHHHHHHHcCCCCCCCCccCCc
Confidence 45566554333 488999999 99999954 4699999999875
No 97
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=97.62 E-value=2.7e-05 Score=58.58 Aligned_cols=46 Identities=22% Similarity=0.357 Sum_probs=36.8
Q ss_pred CCCCCccccccccCcc---eEeecCCCcccccchhhhh----ccCCCCCCcchh
Q psy7970 75 MVTLDECRICSDLKRD---ILFQPCGHVACCSVCAPRV----KKCLICREPVEK 121 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~---~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~ 121 (290)
..+...|.||++.... ++.+||||. +|..|.... ..||+||..+..
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~-Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHY-FHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEE-EEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCCh-HHHHHHHHHHHcCCcCcCcCccCCC
Confidence 3456789999987666 888999996 689998653 689999998865
No 98
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.62 E-value=1.7e-05 Score=55.69 Aligned_cols=42 Identities=31% Similarity=0.769 Sum_probs=31.3
Q ss_pred cccccccc-cC----CceEEeCCCCeecchhhHhcC-----CCCCCCCccccc
Q psy7970 126 EECMVCSL-KK----ASVLFKPCYHMVACESCASLM-----KKCVQCRTQIDH 168 (290)
Q Consensus 126 ~~C~~C~~-~~----~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 168 (290)
+.|.||++ .. ..++++||||. +|..|..+. ..||.||.++..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCGHT-LCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTCCC-EEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CcCCcCCCCccCCCccCeecCCCCCH-hHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 45777777 22 22267899999 999999654 579999999765
No 99
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.58 E-value=3.9e-05 Score=57.40 Aligned_cols=47 Identities=26% Similarity=0.641 Sum_probs=39.2
Q ss_pred CCCCCCCccccccccCcceEeec-CCCcccccchhhhh------ccCCCCCCcch
Q psy7970 73 EDMVTLDECRICSDLKRDILFQP-CGHVACCSVCAPRV------KKCLICREPVE 120 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~P-CgH~~~C~~Ca~~~------~~Cp~Cr~~i~ 120 (290)
.+..+...|.||++...+-+.+| |||. +|..|.... ..||+||.++.
T Consensus 8 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 8 DPIPDELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CCCCTTTEETTTTEECSSCEECTTTCCE-ECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred ccCCcCCCCCCCChhhcCceECCCCCCH-HHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 45566789999999999999999 9999 589998654 48999999863
No 100
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.56 E-value=6.9e-05 Score=52.03 Aligned_cols=42 Identities=29% Similarity=0.695 Sum_probs=34.9
Q ss_pred CCCCCCCccccccccCcceEeecCCCcccccchhhhh-------ccCCCC
Q psy7970 73 EDMVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV-------KKCLIC 115 (290)
Q Consensus 73 ~~~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~Cp~C 115 (290)
....+...|.||++...+.+.+||||. +|..|..+. .+||+|
T Consensus 15 ~~~~~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCCCCBCTTTCSBCSSCEECTTSSE-ECHHHHHHHHHHCSSCCCCSCC
T ss_pred HhCccCCCCCcCCchhCCeEEeCCCCc-chHHHHHHHHHcCCCCCcCcCC
Confidence 455667899999999999999999999 699998754 268877
No 101
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.52 E-value=5.3e-05 Score=58.56 Aligned_cols=46 Identities=22% Similarity=0.449 Sum_probs=38.5
Q ss_pred ccccccccccccCCceEEe-CCCCeecchhhHhcC----CCCCCCCcccccc
Q psy7970 123 IKIEECMVCSLKKASVLFK-PCYHMVACESCASLM----KKCVQCRTQIDHM 169 (290)
Q Consensus 123 ~~i~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~ 169 (290)
.....|.+|++...+.+.+ ||||. +|..|.... ..||.||..+...
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHS-FCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CCcCCCccCChHHhCcCEeCCCCCh-hhHHHHHHHHHhCCcCcCCCcccccc
Confidence 3456899999998888887 99999 999999643 6899999997653
No 102
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=97.52 E-value=5.9e-05 Score=59.77 Aligned_cols=43 Identities=21% Similarity=0.566 Sum_probs=36.6
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+||||. +|..|..+ ...||.||.++..
T Consensus 52 ~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 52 TFQCICCQELVFRPITTVCQHN-VCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred CCCCCcCChHHcCcEEeeCCCc-ccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 3579999998889999999999 99999953 3489999999865
No 103
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=97.51 E-value=5.3e-05 Score=57.97 Aligned_cols=43 Identities=23% Similarity=0.646 Sum_probs=36.9
Q ss_pred ccccccccccCCceEE-eCCCCeecchhhHhcC-----CCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLF-KPCYHMVACESCASLM-----KKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~-~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+. +||||. +|..|..+. ..||.||.++..
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 22 VFRCFICMEKLRDARLCPHCSKL-CCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCccCCccccCccccCCCCCh-hhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 4689999999999999 999999 999999642 589999999754
No 104
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=97.50 E-value=5.4e-05 Score=71.66 Aligned_cols=46 Identities=30% Similarity=0.775 Sum_probs=40.4
Q ss_pred cccccccccCCceEEeCCCCeecchhhHh-----cCCCCCCCCcccccccce
Q psy7970 126 EECMVCSLKKASVLFKPCYHMVACESCAS-----LMKKCVQCRTQIDHMHPM 172 (290)
Q Consensus 126 ~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~-----~~~~Cp~Cr~~i~~~~~~ 172 (290)
..|.||++...+++++||||. .|..|.. ....||.||.++.....+
T Consensus 333 ~~C~ICle~~~~pv~lpCGH~-FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i 383 (389)
T 2y1n_A 333 QLCKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIKGTEPI 383 (389)
T ss_dssp SBCTTTSSSBCCEEEETTCCE-ECHHHHHHHHHHTCSBCTTTCCBCCEEEEC
T ss_pred CCCCccCcCCCCeEEeCCCCh-hhHHHHHHHHhcCCCCCCCCCCccCCceeE
Confidence 589999999999999999999 6999995 457999999999876544
No 105
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=97.49 E-value=6e-05 Score=58.89 Aligned_cols=43 Identities=23% Similarity=0.551 Sum_probs=36.8
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhcC-----CCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASLM-----KKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+||||. +|..|..+. ..||.||..+..
T Consensus 15 ~~~C~iC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 15 ECQCGICMEILVEPVTLPCNHT-LCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHBCTTTCSBCSSCEECTTSCE-ECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCccCCcccCceeEcCCCCH-HhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 3579999998888999999999 999999653 489999999865
No 106
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=97.43 E-value=3.7e-05 Score=53.86 Aligned_cols=46 Identities=7% Similarity=0.096 Sum_probs=39.4
Q ss_pred CCccccccccccccccc--cCCccchHHHhcCC----CCCCCcccccccccC
Q psy7970 244 QTMCPVCLDRLKNMIFL--CGHGTCQMCGDRMS----ECPICRKAVEKRILL 289 (290)
Q Consensus 244 ~~~C~IC~~~~~~~v~~--CGH~fC~~C~~~~~----~CP~CR~~i~~~~~~ 289 (290)
.+.|||+++.+.|||+. +||+|++.+|.+|. .||+.++++....++
T Consensus 3 ~~~CpIs~~~m~dPV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Li 54 (61)
T 2bay_A 3 HMLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV 54 (61)
T ss_dssp -CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCE
T ss_pred eEEecCCCCCCCCCEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcE
Confidence 47899999999999764 99999999999883 799999999776543
No 107
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.42 E-value=4.5e-05 Score=59.00 Aligned_cols=43 Identities=26% Similarity=0.620 Sum_probs=35.8
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhcC-------CCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASLM-------KKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-------~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+||||. +|..|..+. ..||.||.++..
T Consensus 21 ~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIKEPVSTKCDHI-FCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCSSCCBCTTSCC-CCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhcCeEECCCCCH-HHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 4589999988888888999998 999999532 379999998754
No 108
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=97.39 E-value=0.00012 Score=55.57 Aligned_cols=43 Identities=19% Similarity=0.492 Sum_probs=36.0
Q ss_pred ccccccccccCCceEEe-CCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFK-PCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+ ||||. +|..|..+ ...||.||.++..
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 22 LLRCGICFEYFNIAMIIPQCSHN-YCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCcccCChhhCCcCEECCCCCH-hhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 46899998888888887 99999 99999954 3589999998764
No 109
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.33 E-value=0.00014 Score=52.66 Aligned_cols=43 Identities=12% Similarity=0.079 Sum_probs=36.6
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
...|.+|++...+.+.+||||. +|..|..+ ...||.||.++..
T Consensus 8 ~~~C~IC~~~~~~Pv~~~CgH~-fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 8 YFRCPISLELMKDPVIVSTGQT-YERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSCTTTSCCCSSEEEETTTEE-EEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred cCCCCCccccccCCEEcCCCCe-ecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 4689999998889999999999 99999953 4579999998754
No 110
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=97.31 E-value=3.6e-05 Score=61.07 Aligned_cols=40 Identities=23% Similarity=0.623 Sum_probs=0.0
Q ss_pred Ccccccccccccc-----------------cc--ccCCccchHHHhcCC----CCCCCccccc
Q psy7970 245 TMCPVCLDRLKNM-----------------IF--LCGHGTCQMCGDRMS----ECPICRKAVE 284 (290)
Q Consensus 245 ~~C~IC~~~~~~~-----------------v~--~CGH~fC~~C~~~~~----~CP~CR~~i~ 284 (290)
..|+||++.+.++ ++ .|||.|+..|+..|. .||+||+.+.
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~ 111 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWE 111 (117)
T ss_dssp ---------------------------------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeee
Confidence 5799999988763 22 499999999999983 7999999864
No 111
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.31 E-value=9.4e-05 Score=58.09 Aligned_cols=42 Identities=24% Similarity=0.470 Sum_probs=36.3
Q ss_pred ccccccccccCCceEEe-CCCCeecchhhHhcC--CCCCCCCcccc
Q psy7970 125 IEECMVCSLKKASVLFK-PCYHMVACESCASLM--KKCVQCRTQID 167 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~~--~~Cp~Cr~~i~ 167 (290)
...|.||++...+.+++ ||||. +|..|..+. ..||.||.++.
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~-fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHI-FCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCC-BCTTTGGGGTTTBCSSSCCBCS
T ss_pred CCCCCCCChHhhCccEeCCCCCH-HHHHHHHHHhcCCCcCCCCcCc
Confidence 46888998888888888 99999 999999766 57999999863
No 112
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=97.29 E-value=0.00016 Score=59.58 Aligned_cols=44 Identities=20% Similarity=0.542 Sum_probs=37.2
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhcC-----CCCCCCCcccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASLM-----KKCVQCRTQIDHM 169 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~~ 169 (290)
...|.||++...+.+.+||||. +|..|..+. ..||.||.++...
T Consensus 78 ~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVTTECFHN-VCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred CCEeecCChhhcCCEEcCCCCc-hhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 4689999999999999999998 999999643 3799999987653
No 113
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.26 E-value=0.00017 Score=56.72 Aligned_cols=43 Identities=23% Similarity=0.484 Sum_probs=37.0
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhcC-----CCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASLM-----KKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 168 (290)
...|.+|++...+.+.+||||. +|..|.... ..||.||.++..
T Consensus 18 ~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 18 KYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCcCChhhcCeEECCcCCh-hhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 4689999999889999999999 999999542 499999998765
No 114
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.15 E-value=0.00025 Score=58.90 Aligned_cols=43 Identities=23% Similarity=0.542 Sum_probs=35.2
Q ss_pred ccccccccccCCceEEe-CCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFK-PCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+ ||||. +|..|..+ ...||.||.++..
T Consensus 54 ~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 54 ELMCPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCcccChHhhCcCEeCCCCCh-hHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 35788888888888877 99998 99999954 4579999999854
No 115
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.14 E-value=0.00031 Score=54.84 Aligned_cols=43 Identities=23% Similarity=0.455 Sum_probs=37.0
Q ss_pred ccccccccccCCceEEeCCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 125 IEECMVCSLKKASVLFKPCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
...|.||++...+.+.+||||. +|..|..+ ...||.||.++..
T Consensus 23 ~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADPVETSCKHL-FCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCcEEcCCCCc-ccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 4689999999999999999999 99999953 4589999998765
No 116
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.08 E-value=0.00036 Score=51.22 Aligned_cols=41 Identities=24% Similarity=0.586 Sum_probs=27.8
Q ss_pred cccccccc---CCceEEe-CCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 127 ECMVCSLK---KASVLFK-PCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 127 ~C~~C~~~---~~~~~~~-PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
.|.+|++. ...++.+ +|||. ++..|..+ -..||+||.++..
T Consensus 28 ~C~iC~~~~~~~~~~~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 28 ACLRCQAENKQEDCVVVWGECNHS-FHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CCTTHHHHTCTTTCCEEEETTSCE-EEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred cCcccccccCCCceEEEeCCCCCc-cChHHHHHHHHhCCCCCCcCCCcch
Confidence 35555442 2223444 59999 99999963 4689999988643
No 117
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=96.85 E-value=0.0003 Score=54.56 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=25.3
Q ss_pred ceEEeCCCCeecchhhHhc---------CCCCCCCCcccccc
Q psy7970 137 SVLFKPCYHMVACESCASL---------MKKCVQCRTQIDHM 169 (290)
Q Consensus 137 ~~~~~PCgH~~~C~~Ca~~---------~~~Cp~Cr~~i~~~ 169 (290)
.+.++||||. +|..|... -..||.||..+...
T Consensus 55 ~~~~~~C~H~-Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 55 VGRLTKCSHA-FHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEEESSSCCE-ECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred ceecCCCCCc-ccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 3458899998 99999853 24899999887654
No 118
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.83 E-value=0.00053 Score=50.54 Aligned_cols=44 Identities=20% Similarity=0.464 Sum_probs=34.8
Q ss_pred CCCcccccccccc--cccc-ccC-----CccchHHHhcC------CCCCCCccccccc
Q psy7970 243 EQTMCPVCLDRLK--NMIF-LCG-----HGTCQMCGDRM------SECPICRKAVEKR 286 (290)
Q Consensus 243 e~~~C~IC~~~~~--~~v~-~CG-----H~fC~~C~~~~------~~CP~CR~~i~~~ 286 (290)
++..|.||++.+. ++++ +|. |.|-..|+.+| ..||+||..+.-.
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 5678999998764 3444 485 99999999998 3799999998543
No 119
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=96.72 E-value=0.00094 Score=55.56 Aligned_cols=44 Identities=23% Similarity=0.474 Sum_probs=37.8
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhcC-----CCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASLM-----KKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i~~ 168 (290)
..+.|.||++...+.+.+||||. +|..|..+. ..||.||.++..
T Consensus 17 ~~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcCcEECCCCCH-HHHHHHHHHHHhCCCCCCCCccCcch
Confidence 35689999999999999999999 999999643 499999998765
No 120
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=96.64 E-value=0.00026 Score=57.66 Aligned_cols=42 Identities=19% Similarity=0.424 Sum_probs=36.1
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhcC-----CCCCCCCccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASLM-----KKCVQCRTQI 166 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~-----~~Cp~Cr~~i 166 (290)
..+.|.||++...+.+.+||||. +|..|..+. ..||.||.++
T Consensus 30 ~~~~C~IC~~~~~~pv~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQAQCGHR-YCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcCcEECCCCCc-cCHHHHHHHHhcCCCCCCCCCCcc
Confidence 35689999999888899999999 999999653 4899999875
No 121
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.57 E-value=0.002 Score=49.31 Aligned_cols=33 Identities=30% Similarity=0.683 Sum_probs=27.4
Q ss_pred eEEeCCCCeecchhhHhc-----CCCCCCCCcccccccc
Q psy7970 138 VLFKPCYHMVACESCASL-----MKKCVQCRTQIDHMHP 171 (290)
Q Consensus 138 ~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~~~~ 171 (290)
..++||+|. +|.+|+.. .+.||.|+.+|.++..
T Consensus 15 gRmIPCkHv-FCydCa~~~~~~~~k~Cp~C~~~V~rVe~ 52 (101)
T 3vk6_A 15 GRMIPCKHV-FCYDCAILHEKKGDKMCPGCSDPVQRIEQ 52 (101)
T ss_dssp EEEETTCCE-EEHHHHHHHHHTTCCBCTTTCCBCSEEEE
T ss_pred eeecccccc-HHHHHHHHHHhccCCCCcCcCCeeeeeEE
Confidence 367899996 99999953 5789999999988653
No 122
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=96.42 E-value=0.0021 Score=49.79 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=24.5
Q ss_pred ceEEeCCCCeecchhhHhc----CCCCCCCCccc
Q psy7970 137 SVLFKPCYHMVACESCASL----MKKCVQCRTQI 166 (290)
Q Consensus 137 ~~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i 166 (290)
.++.+||||. ++..|... -..||+||...
T Consensus 67 ~~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~Cr~~~ 99 (106)
T 3dpl_R 67 TVAWGVCNHA-FHFHCISRWLKTRQVCPLDNREW 99 (106)
T ss_dssp CEEEETTSCE-EEHHHHHHHHTTCSBCSSSCSBC
T ss_pred eEeecccCcE-ECHHHHHHHHHcCCcCcCCCCcc
Confidence 4678899999 99999964 46899999885
No 123
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=96.34 E-value=0.0037 Score=46.24 Aligned_cols=44 Identities=7% Similarity=-0.192 Sum_probs=38.1
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
..+.|.+|++-..+.+.+||||. +|..|..+ ...||.||+++..
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hheECcccCchhcCCeECCCCCE-ECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 45789999999999999999999 99999853 4689999988754
No 124
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.30 E-value=0.0018 Score=49.52 Aligned_cols=41 Identities=27% Similarity=0.572 Sum_probs=31.6
Q ss_pred cccccccccccc--ccccCCccchHHHhcC-----CCCCCCccccccc
Q psy7970 246 MCPVCLDRLKNM--IFLCGHGTCQMCGDRM-----SECPICRKAVEKR 286 (290)
Q Consensus 246 ~C~IC~~~~~~~--v~~CGH~fC~~C~~~~-----~~CP~CR~~i~~~ 286 (290)
.|++|---++.- +++|.|.||..|+..| ..||.|+.+|.+.
T Consensus 3 fC~~C~~Pi~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~rV 50 (101)
T 3vk6_A 3 FCDKCGLPIKVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRI 50 (101)
T ss_dssp BCTTTCSBCSEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSEE
T ss_pred ecCccCCCeEEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeeee
Confidence 477776655444 5679999999999764 4799999998764
No 125
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=96.15 E-value=0.0034 Score=47.99 Aligned_cols=44 Identities=7% Similarity=-0.178 Sum_probs=37.7
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
..+.|.+|++-..+.+.+||||. +|..|..+ ...||.||.++..
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEE-EEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred HhhCCcCccCcccCCeECCCCCE-EchHHHHHHHHcCCCCCCCCCCCCh
Confidence 35689999999999999999999 99999854 3589999988654
No 126
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=96.11 E-value=0.0044 Score=47.19 Aligned_cols=44 Identities=9% Similarity=-0.140 Sum_probs=37.5
Q ss_pred cccccccccccCCceEEeCCC-CeecchhhHhc----CCCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCY-HMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCg-H~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
..+.|.+|++-..+.+.+||| |. +|..|..+ ...||+||+++..
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~ht-f~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVT-VDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred HhcCCcCccccccCCeECCCCCeE-ECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 356899999999999999999 98 99999854 3589999988654
No 127
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.82 E-value=0.0065 Score=53.67 Aligned_cols=44 Identities=5% Similarity=-0.226 Sum_probs=37.5
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
....|.+|.+...+.+.+||||. +|..|..+ ...||.||.++..
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~-f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCE-EETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcCCeECCCCCE-ECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 45789999999999999999999 99999853 2349999998754
No 128
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=95.41 E-value=0.0063 Score=46.42 Aligned_cols=43 Identities=23% Similarity=0.196 Sum_probs=30.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|+|++.+|..|.|||+++......+.+.-+.+.
T Consensus 53 ~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 95 (123)
T 3aaa_C 53 LEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSK 95 (123)
T ss_dssp HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3677788888888888888888888888554444444444443
No 129
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=95.40 E-value=0.0099 Score=46.10 Aligned_cols=39 Identities=26% Similarity=0.249 Sum_probs=27.2
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 90 DIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 466677777777777777777777777766666655544
No 130
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=95.13 E-value=0.0036 Score=49.44 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=0.0
Q ss_pred eEEeCCCCeecchhhHhc----CCCCCCCCccc
Q psy7970 138 VLFKPCYHMVACESCASL----MKKCVQCRTQI 166 (290)
Q Consensus 138 ~~~~PCgH~~~C~~Ca~~----~~~Cp~Cr~~i 166 (290)
++..||||. ++..|..+ -..||+||.+.
T Consensus 79 v~~~~C~H~-FH~~CI~~Wl~~~~~CP~Cr~~~ 110 (117)
T 4a0k_B 79 VAWGVCNHA-FHFHCISRWLKTRQVCPLDNREW 110 (117)
T ss_dssp ---------------------------------
T ss_pred cccCCcCce-EcHHHHHHHHHcCCcCCCCCCee
Confidence 456799999 99999964 46899999874
No 131
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=95.08 E-value=0.0055 Score=44.50 Aligned_cols=42 Identities=26% Similarity=0.415 Sum_probs=28.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|+++|+|++.+|..|.|||.++......+.++-+.+
T Consensus 15 ~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 56 (93)
T 1n0q_A 15 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 56 (93)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 367778888888888888888888887754444444444443
No 132
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=94.82 E-value=0.013 Score=48.96 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=16.1
Q ss_pred HHHHHHHh-CCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAG-NGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~-~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++ .|||++++|..|+|||+++
T Consensus 134 ~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 134 PLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp HHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 35555555 6666666666666666665
No 133
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=94.74 E-value=0.02 Score=50.54 Aligned_cols=38 Identities=21% Similarity=0.320 Sum_probs=29.9
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCc-hhHHHHH
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDP-NLCKALT 51 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~-~~~~~l~ 51 (290)
..++-+|+++|||++++|.+|+|||+++..- .+.++|+
T Consensus 198 ~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~ 236 (269)
T 4b93_B 198 VFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQ 236 (269)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHH
Confidence 3678899999999999999999999998643 3344443
No 134
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=94.43 E-value=0.017 Score=43.31 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-||+++|+|++.+|..|+|||+++......+.+.-+.
T Consensus 56 ~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll 95 (115)
T 2l6b_A 56 EIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLD 95 (115)
T ss_dssp HHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 4555666666666666666666666664444444444444
No 135
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=94.39 E-value=0.042 Score=47.95 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=30.5
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
.++-+|+++|||++++|..|+|||+++.. ...+.+..+.++
T Consensus 246 ~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~ 286 (299)
T 1s70_B 246 EACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQKK 286 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence 56778888899988888889999988865 445555555543
No 136
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.39 E-value=0.026 Score=42.24 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=33.5
Q ss_pred ccccccccccCCceEEeC-CCCeecchhhHhc----------CCCCCC--CCcc
Q psy7970 125 IEECMVCSLKKASVLFKP-CYHMVACESCASL----------MKKCVQ--CRTQ 165 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~P-CgH~~~C~~Ca~~----------~~~Cp~--Cr~~ 165 (290)
.+.|.+|++...+.+.+| |||. +|..|... ...||. |+..
T Consensus 7 ~~~CPI~~~~~~dPV~~~~cGh~-f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 7 GFTCPITKEEMKKPVKNKVCGHT-YEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp CCBCTTTCSBCSSEEEESSSCCE-EEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred EeECcCcCchhcCCEEcCCCCCe-ecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 467999999999999997 9999 99999843 238999 8865
No 137
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=94.20 E-value=0.037 Score=46.76 Aligned_cols=44 Identities=5% Similarity=-0.237 Sum_probs=36.7
Q ss_pred cccccccccccCCceEEeCCCCeecchhhHhc-----CCCCCCCCccccc
Q psy7970 124 KIEECMVCSLKKASVLFKPCYHMVACESCASL-----MKKCVQCRTQIDH 168 (290)
Q Consensus 124 ~i~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~-----~~~Cp~Cr~~i~~ 168 (290)
.-..|.+|.+-..+.+++||||. +|..|..+ ...||.||.++..
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ght-fer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhhcccCccccCCCCeECCCCCE-ECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 34689999999999999999998 99999843 2359999988754
No 138
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=94.15 E-value=0.039 Score=44.66 Aligned_cols=42 Identities=33% Similarity=0.283 Sum_probs=31.9
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
.++-+|+++|||++.+|..|+|||+++........+..+.+.
T Consensus 119 ~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 119 QVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKM 160 (179)
T ss_dssp HHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 577888888888888888888888888776665555555543
No 139
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=94.06 E-value=0.014 Score=42.28 Aligned_cols=41 Identities=27% Similarity=0.415 Sum_probs=32.9
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
..++-||++.|||++.+|..|.|||+++......+.+.-+.
T Consensus 48 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll 88 (93)
T 1n0q_A 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL 88 (93)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 36788999999999999999999999986555555554444
No 140
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=93.95 E-value=0.1 Score=43.91 Aligned_cols=45 Identities=16% Similarity=0.136 Sum_probs=36.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhccc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDKE 58 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~~ 58 (290)
..++-+|++.|||++.+|..|+|||+++......+.++-+.+...
T Consensus 164 ~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 164 PDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 367889999999999999999999999987777676666665443
No 141
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=93.90 E-value=0.057 Score=42.87 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=15.3
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
.++-+|++.|+|++..|..|.|||+++.
T Consensus 89 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 116 (165)
T 3twr_A 89 EVAELLVKHGAVVNVADLWKFTPLHEAA 116 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 3455555555555555555555555553
No 142
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.90 E-value=0.088 Score=38.39 Aligned_cols=48 Identities=25% Similarity=0.535 Sum_probs=33.6
Q ss_pred CCCCCCccccccccC--cceEeecCC-----Ccccccchhhhh------ccCCCCCCcchhh
Q psy7970 74 DMVTLDECRICSDLK--RDILFQPCG-----HVACCSVCAPRV------KKCLICREPVEKR 122 (290)
Q Consensus 74 ~~~~~~~C~iC~~~~--~~~~~~PCg-----H~~~C~~Ca~~~------~~Cp~Cr~~i~~~ 122 (290)
...+...|.||++.. .+.+++||+ |.. -..|-.+- ..||+||..+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~f-H~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 11 TPSSQDICRICHCEGDDESPLITPCHCTGSLHFV-HQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp CCTTSCCCSSSCCCCCSSSCEECSSSCCSSSCCE-ETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCCCeEcCccccCCCeeEeccccCCcCCee-CHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 345567899999653 345678996 874 66776542 3899999987543
No 143
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=93.68 E-value=0.016 Score=47.71 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|||++.+|..|.|||.++......+.+.-+.+.
T Consensus 83 ~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ 125 (169)
T 4gpm_A 83 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISK 125 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4677888888888888888888888887555545555555444
No 144
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.53 E-value=0.046 Score=39.47 Aligned_cols=43 Identities=21% Similarity=0.470 Sum_probs=35.0
Q ss_pred CCCcccccccccccccc--ccCCccchHHHhcC------CCCCCCcccccc
Q psy7970 243 EQTMCPVCLDRLKNMIF--LCGHGTCQMCGDRM------SECPICRKAVEK 285 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~--~CGH~fC~~C~~~~------~~CP~CR~~i~~ 285 (290)
....|.||.+.+..-.. .|+|.|=..|+.+| ..||.||..+..
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~ 64 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 64 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCS
T ss_pred CCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCC
Confidence 45789999999875433 49999999999977 369999998754
No 145
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=93.52 E-value=0.024 Score=47.70 Aligned_cols=43 Identities=19% Similarity=0.284 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhcc
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDK 57 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~ 57 (290)
.++-+|++.|||++++|..|+|||+++......+.+..+.+..
T Consensus 154 ~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 154 DIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp HHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred HHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 5788899999999999999999999998888888777776543
No 146
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=93.46 E-value=0.027 Score=41.97 Aligned_cols=40 Identities=20% Similarity=0.486 Sum_probs=28.6
Q ss_pred ccccccccccCCce---EEeCCCCeecchhhHhc------------CCCCCC--CCcc
Q psy7970 125 IEECMVCSLKKASV---LFKPCYHMVACESCASL------------MKKCVQ--CRTQ 165 (290)
Q Consensus 125 i~~C~~C~~~~~~~---~~~PCgH~~~C~~Ca~~------------~~~Cp~--Cr~~ 165 (290)
...|.||++..... .+.||||. +|..|... ...||. |+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~-FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCI-FCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEE-EEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CcCCcccCcccccccceEcCCCCCc-ccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 35688888764432 23489999 99999831 238999 9977
No 147
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=93.27 E-value=0.073 Score=45.95 Aligned_cols=38 Identities=34% Similarity=0.656 Sum_probs=30.2
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCC-chhHHHHH
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPD-PNLCKALT 51 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d-~~~~~~l~ 51 (290)
..++-+|++.|||++.+|.+|+|||+++.. ..+.+.+.
T Consensus 179 ~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~~~~~~~ll 217 (261)
T 2xai_A 179 EELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFL 217 (261)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCGGGGSCTTCTHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhccccccHHHHHH
Confidence 368899999999999999999999999953 33333333
No 148
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=93.24 E-value=0.027 Score=46.99 Aligned_cols=28 Identities=32% Similarity=0.434 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
..|+-||++.|||++.+|..|.|||.++
T Consensus 55 ~~iv~~Ll~~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 55 YKISMFLINKGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HHHHHHHHHTTCCSSCCCTTCCCTHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4589999999999999999999999986
No 149
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=93.24 E-value=0.034 Score=41.90 Aligned_cols=30 Identities=20% Similarity=0.616 Sum_probs=25.0
Q ss_pred CCCcccccccc-cccccc--c-cCCccchHHHhc
Q psy7970 243 EQTMCPVCLDR-LKNMIF--L-CGHGTCQMCGDR 272 (290)
Q Consensus 243 e~~~C~IC~~~-~~~~v~--~-CGH~fC~~C~~~ 272 (290)
++..|+||.+. +.+++. + |+|.||..|+..
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~C~~~~C~~Cl~~ 35 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 35 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCCcCCCCCCCCCceEECCcCChHHhHHHCHH
Confidence 56899999975 677765 3 999999999996
No 150
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=93.19 E-value=0.096 Score=40.40 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++.+|..|.|||.++.. ...+.+.-+.+.
T Consensus 25 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 66 (136)
T 1d9s_A 25 VETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLH 66 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC
Confidence 367889999999999999999999999988 777777777654
No 151
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=93.04 E-value=0.025 Score=46.48 Aligned_cols=44 Identities=20% Similarity=0.347 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhcc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDK 57 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~ 57 (290)
..++-+|++.|||++.+|..|.|||.++......+.++-+.+..
T Consensus 50 ~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~g 93 (169)
T 4gpm_A 50 KEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 93 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 46778888888888888888888888885555455555555443
No 152
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=92.83 E-value=0.089 Score=46.23 Aligned_cols=28 Identities=43% Similarity=0.838 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
.++-+|++.|||++.+|.+|+|||+++.
T Consensus 236 ~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 236 ELACLLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHhc
Confidence 6888999999999999999999999996
No 153
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=92.68 E-value=0.027 Score=42.77 Aligned_cols=41 Identities=17% Similarity=0.149 Sum_probs=27.3
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|+|++.+|..|.|||.++......+.+.-+.+
T Consensus 21 ~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 61 (123)
T 3aaa_C 21 DEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLL 61 (123)
T ss_dssp HHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 56777788888888888888888887744444444444443
No 154
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=92.64 E-value=0.025 Score=42.49 Aligned_cols=43 Identities=28% Similarity=0.401 Sum_probs=32.1
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|+|++.+|..|.|||.++......+.++-+.+.
T Consensus 37 ~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ 79 (110)
T 2zgd_A 37 DDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA 79 (110)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3678888899999999999999999888555555555555544
No 155
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=92.43 E-value=0.025 Score=43.82 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=26.5
Q ss_pred HHHHHHHHhCCCCCcccccC-CCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKK-GQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~-g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|.. |.|||.++......+.+.-+.+
T Consensus 57 ~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 99 (136)
T 1d9s_A 57 AQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHR 99 (136)
T ss_dssp HHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45667777777777777777 7777777754444444444443
No 156
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=92.38 E-value=0.043 Score=45.95 Aligned_cols=40 Identities=23% Similarity=0.246 Sum_probs=21.4
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 153 KMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 4555666666666666666666666654333333333333
No 157
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=92.38 E-value=0.032 Score=51.91 Aligned_cols=43 Identities=19% Similarity=0.560 Sum_probs=34.4
Q ss_pred CCCccccccccccc----ccc-----ccCCccchHHHhcCC---------------CCCCCcccccc
Q psy7970 243 EQTMCPVCLDRLKN----MIF-----LCGHGTCQMCGDRMS---------------ECPICRKAVEK 285 (290)
Q Consensus 243 e~~~C~IC~~~~~~----~v~-----~CGH~fC~~C~~~~~---------------~CP~CR~~i~~ 285 (290)
....|+||++.+.+ |.. .|||.|=..|+.+|. .||.||++++.
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 45689999998877 211 399999999998872 49999999853
No 158
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=92.21 E-value=0.035 Score=49.26 Aligned_cols=27 Identities=37% Similarity=0.614 Sum_probs=13.5
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-||+++|||++.+|..|.|||+++
T Consensus 186 ~~v~~Ll~~ga~in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 186 HIVDFLVQNSGNLDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHCCCCccccCCCCCCHHHHH
Confidence 444455555555555555555555544
No 159
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=92.08 E-value=0.073 Score=44.66 Aligned_cols=41 Identities=24% Similarity=0.331 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|+|++..|..|.|||+++...+..+.+.-+.+
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 56667777777777777777777776644444444444443
No 160
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=91.96 E-value=0.037 Score=41.34 Aligned_cols=42 Identities=26% Similarity=0.415 Sum_probs=29.2
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-||++.|+|++.+|..|.|||.++......+.+.-+.+
T Consensus 48 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 89 (126)
T 1n0r_A 48 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89 (126)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHH
Confidence 367778888888888888888888888754444444444443
No 161
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=91.94 E-value=0.029 Score=44.54 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=18.9
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+
T Consensus 92 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~L 130 (156)
T 1bi7_B 92 DTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 130 (156)
T ss_dssp HHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHH
Confidence 344555555555555555555555555333333333333
No 162
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=91.63 E-value=0.059 Score=46.26 Aligned_cols=45 Identities=22% Similarity=0.088 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhccc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDKE 58 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~~ 58 (290)
..++-+|++.|||++.+|..|+|||+++......+.+.-+.+...
T Consensus 205 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 249 (282)
T 1oy3_D 205 ASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249 (282)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCC
Confidence 367889999999999999999999999866665555555555443
No 163
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=91.62 E-value=0.042 Score=47.20 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+.
T Consensus 171 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 210 (253)
T 1yyh_A 171 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL 210 (253)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 5666777777777777777777777764433333333333
No 164
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=91.59 E-value=0.043 Score=42.44 Aligned_cols=43 Identities=28% Similarity=0.250 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++.+|..|.|||.++......+.++-+.+.
T Consensus 60 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 102 (136)
T 2jab_A 60 LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH 102 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4678889999999999999999999988555444444444443
No 165
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=91.56 E-value=0.051 Score=40.65 Aligned_cols=33 Identities=27% Similarity=0.416 Sum_probs=28.1
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNL 46 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~ 46 (290)
..++-||++.|||++.+|..|.|||+++.....
T Consensus 70 ~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~ 102 (110)
T 2zgd_A 70 LEVVKLLLEAGADVXAQDKFGKTAFDISIDNGN 102 (110)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCccccccCCCcHHHHHHHcCC
Confidence 367889999999999999999999998854433
No 166
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=91.05 E-value=0.048 Score=48.99 Aligned_cols=29 Identities=28% Similarity=0.463 Sum_probs=16.1
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
..++-||+++|||++.+|..|.|||.++.
T Consensus 206 ~~iv~~Ll~~gadvn~~d~~G~TpLh~A~ 234 (301)
T 2b0o_E 206 LPLVDFIIQNGGHLDAKAADGNTALHYAA 234 (301)
T ss_dssp HHHHHHHHHHSSCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 34555555555555555555555555553
No 167
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=90.80 E-value=0.049 Score=43.61 Aligned_cols=26 Identities=38% Similarity=0.570 Sum_probs=12.9
Q ss_pred HHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 16 IACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 16 iacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
++-+|++.|||++.+|..|.|||+++
T Consensus 117 ~v~~Ll~~ga~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 117 CVEALLARGADLTTEADSGYTPMDLA 142 (172)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCCccccCCCCCCHHHHH
Confidence 44445555555555555555555544
No 168
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=90.64 E-value=0.11 Score=38.71 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=35.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++.+|..|.|||.++......+.+.-+.+.
T Consensus 22 ~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 64 (115)
T 2l6b_A 22 AEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64 (115)
T ss_dssp HHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 3678899999999999999999999999776666666666643
No 169
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=90.64 E-value=0.3 Score=38.42 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|+++|+|++.+|..|.|||.++. ....+.+..+.+
T Consensus 26 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~ 65 (156)
T 1bi7_B 26 EEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLL 65 (156)
T ss_dssp HHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHH
Confidence 5778999999999999999999999985 445555555554
No 170
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=90.39 E-value=0.066 Score=42.91 Aligned_cols=43 Identities=28% Similarity=0.356 Sum_probs=32.7
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|+|++.+|..|.|||+++......+.++-+.+.
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 135 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN 135 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4688899999999999999999999988555555555555544
No 171
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=90.22 E-value=0.075 Score=41.75 Aligned_cols=40 Identities=23% Similarity=0.229 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4556666666666666666666666664433333333333
No 172
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=90.22 E-value=0.066 Score=42.10 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNL 46 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~ 46 (290)
..++-+|++.|||++.+|..|.|||+++.....
T Consensus 113 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 113 QEVVELLIKYGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 368889999999999999999999999844433
No 173
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=90.13 E-value=0.076 Score=48.68 Aligned_cols=28 Identities=25% Similarity=0.538 Sum_probs=14.2
Q ss_pred HHHHHHHhCC-CCCcccccCCCCCCCCCC
Q psy7970 15 SIACFLAGNG-ADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 15 aiacfL~~~G-adl~~~n~~g~tpldl~~ 42 (290)
.++-+|+++| +|++.+|..|.|||+++.
T Consensus 293 ~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~ 321 (373)
T 2fo1_E 293 PIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321 (373)
T ss_dssp HHHHHHHHHSCCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHHHHhcCCCccCcCCCCCCHHHHHH
Confidence 4445555443 555555555555555553
No 174
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=90.12 E-value=0.068 Score=41.17 Aligned_cols=40 Identities=10% Similarity=0.105 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 57 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 96 (137)
T 3c5r_A 57 KVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLL 96 (137)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4556666666666666666666666664333333333333
No 175
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=89.91 E-value=0.068 Score=47.33 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=33.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|||++.+|..|+|||+++......+.+.-+.+
T Consensus 218 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 259 (278)
T 1dcq_A 218 AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQ 259 (278)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 368889999999999999999999999965554444444443
No 176
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=89.91 E-value=0.064 Score=42.65 Aligned_cols=40 Identities=25% Similarity=0.261 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+..+.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 122 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122 (167)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5566666667777666666777766664433334433333
No 177
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=89.71 E-value=0.086 Score=40.68 Aligned_cols=43 Identities=28% Similarity=0.349 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++.+|..|.|||.++......+.+..+.+.
T Consensus 27 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 69 (136)
T 2jab_A 27 DDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN 69 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4678899999999999999999999998554444555444443
No 178
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=89.70 E-value=0.079 Score=41.52 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=13.0
Q ss_pred HHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 16 IACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 16 iacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
++-+|++.|+|++.+|..|.|||+++
T Consensus 83 ~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (156)
T 1bd8_A 83 TLKVLVEHGADVNVPDGTGALPIHLA 108 (156)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 44445555555555555555555544
No 179
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=89.68 E-value=0.088 Score=50.52 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=16.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPD 43 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d 43 (290)
.++-+|+++|||++++|..|.|||+++..
T Consensus 221 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 221 DCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp HHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 45555666666666666666666665533
No 180
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=89.56 E-value=0.084 Score=41.57 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=16.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPD 43 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d 43 (290)
.++-+|++.|+|++.+|..|.|||+++..
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 112 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGNLPLHLAAK 112 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 45555666666666666666666655533
No 181
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=89.46 E-value=0.18 Score=48.25 Aligned_cols=45 Identities=24% Similarity=0.296 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhccc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDKE 58 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~~ 58 (290)
..++-||+++|||++.+|..|.|||+++......+.+.-+++...
T Consensus 187 ~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga 231 (497)
T 3lvq_E 187 LPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 231 (497)
T ss_dssp HHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 458889999999999999999999999987777776666665543
No 182
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=89.46 E-value=0.061 Score=44.80 Aligned_cols=41 Identities=22% Similarity=0.366 Sum_probs=30.6
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+.+
T Consensus 191 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~ 231 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQE 231 (240)
T ss_dssp HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 56778888899998889999999988865555555544443
No 183
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=88.92 E-value=0.091 Score=44.85 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+.
T Consensus 84 ~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4566677777777777777777777764444444444444
No 184
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=88.91 E-value=0.11 Score=41.86 Aligned_cols=39 Identities=21% Similarity=0.123 Sum_probs=20.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+
T Consensus 86 ~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~L 124 (179)
T 3f6q_A 86 DIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124 (179)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 355556666666666666666666665333333333333
No 185
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=88.90 E-value=0.14 Score=42.87 Aligned_cols=34 Identities=24% Similarity=0.248 Sum_probs=28.8
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhH
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLC 47 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~ 47 (290)
..++-+|++.|||++.+|..|.|||+++......
T Consensus 134 ~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~ 167 (232)
T 2rfa_A 134 EEIVRLLIEHGADIRAQDSLGNTVLHILILQPNK 167 (232)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCH
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCh
Confidence 3688899999999999999999999999544433
No 186
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=88.87 E-value=0.13 Score=42.65 Aligned_cols=42 Identities=24% Similarity=0.311 Sum_probs=26.4
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|..|.|||+++......+.+.-+.+
T Consensus 138 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 179 (223)
T 2f8y_A 138 VDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 179 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 356777777777777777777777777744443344443433
No 187
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=88.85 E-value=0.19 Score=44.86 Aligned_cols=43 Identities=16% Similarity=0.313 Sum_probs=34.8
Q ss_pred ccccccccccCCceEEe-CCCCeecchhhHhcC------CCCCC--CCccccc
Q psy7970 125 IEECMVCSLKKASVLFK-PCYHMVACESCASLM------KKCVQ--CRTQIDH 168 (290)
Q Consensus 125 i~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~~------~~Cp~--Cr~~i~~ 168 (290)
-..|.+|++...+.+.. .|||. +|..|..+. ..||. |++.+..
T Consensus 181 el~CPIcl~~f~DPVts~~CGHs-FcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 181 ELTCPITCKPYEAPLISRKCNHV-FDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp CSBCTTTSSBCSSEEEESSSCCE-EEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eeECcCccCcccCCeeeCCCCCc-ccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 35788898888888875 99998 999999643 36999 9987654
No 188
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=88.84 E-value=0.22 Score=34.16 Aligned_cols=43 Identities=26% Similarity=0.630 Sum_probs=31.6
Q ss_pred cCCCcccccccccccccc-ccC--C---ccchHHHhcC------CCCCCCccccc
Q psy7970 242 KEQTMCPVCLDRLKNMIF-LCG--H---GTCQMCGDRM------SECPICRKAVE 284 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~-~CG--H---~fC~~C~~~~------~~CP~CR~~i~ 284 (290)
++...|.||++...++.+ +|. + .|=..|+.+| ..||+|+..+.
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 456789999987666644 544 4 5667788877 37999998875
No 189
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=88.62 E-value=0.095 Score=47.01 Aligned_cols=41 Identities=17% Similarity=0.106 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
..++-+|++.|||++++|..|+|||+++......+.+.-+.
T Consensus 239 ~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll 279 (301)
T 2b0o_E 239 PDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLE 279 (301)
T ss_dssp HHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 36889999999999999999999999996555444444444
No 190
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=88.58 E-value=0.092 Score=42.80 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=18.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++.|||++.+|..|+|||+++
T Consensus 124 ~~v~~Ll~~ga~~~~~d~~g~tpl~~A 150 (183)
T 3deo_A 124 EVVEALVELGADIEVEDERGLTALELA 150 (183)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCCCcCCCCCCCCHHHHH
Confidence 456667777777777777777777665
No 191
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=88.56 E-value=0.11 Score=41.06 Aligned_cols=29 Identities=34% Similarity=0.511 Sum_probs=19.1
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPD 43 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d 43 (290)
.++-+|++.|+|++.+|..|.|||.++..
T Consensus 56 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 56 SVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 56666666666666666666666666633
No 192
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=88.29 E-value=0.2 Score=42.89 Aligned_cols=43 Identities=19% Similarity=0.178 Sum_probs=35.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhcc
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKDK 57 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~~ 57 (290)
.++-+|++.|||++.+|..|.|||.++......+.+..+.+..
T Consensus 59 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~ 101 (282)
T 1oy3_D 59 STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR 101 (282)
T ss_dssp HHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSC
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccC
Confidence 5778899999999999999999999998777777777666543
No 193
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=88.16 E-value=0.12 Score=44.20 Aligned_cols=26 Identities=19% Similarity=0.244 Sum_probs=14.4
Q ss_pred HHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 16 IACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 16 iacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
++-+|++.|+|++.+|..|.|||.++
T Consensus 139 ~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 139 MLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp HHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred HHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 44555555555555555555555555
No 194
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=88.16 E-value=0.13 Score=40.28 Aligned_cols=42 Identities=19% Similarity=0.301 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|..|.|||.++......+.+.-+.+
T Consensus 48 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 89 (156)
T 1bd8_A 48 TAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVE 89 (156)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 467788888899998888899999888865555555555554
No 195
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=88.08 E-value=0.13 Score=41.89 Aligned_cols=40 Identities=25% Similarity=0.419 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 115 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 115 EMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp HHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4566677777777777777777777664444334444443
No 196
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=88.05 E-value=0.14 Score=40.96 Aligned_cols=43 Identities=28% Similarity=0.309 Sum_probs=33.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++..|..|.|||+++......+.+.-+.+.
T Consensus 60 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 102 (169)
T 2y1l_E 60 LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN 102 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4788999999999999999999999998554444444444443
No 197
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=87.98 E-value=0.11 Score=45.43 Aligned_cols=42 Identities=14% Similarity=0.120 Sum_probs=32.7
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|||++.+|..|.|||+++......+.+.-+.+
T Consensus 196 ~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 237 (276)
T 4hbd_A 196 VDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA 237 (276)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 367889999999999999999999999865555555555553
No 198
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=87.98 E-value=0.11 Score=46.82 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|||++.+|..|.|||+++......+.+.-+.+
T Consensus 225 ~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~ 265 (364)
T 3ljn_A 225 DVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQ 265 (364)
T ss_dssp HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHH
Confidence 56667777777777777777777777644444444444443
No 199
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=87.85 E-value=0.14 Score=38.06 Aligned_cols=42 Identities=26% Similarity=0.415 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|+++|+|++..|..|.|||.++......+.+..+.+
T Consensus 15 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 56 (126)
T 1n0r_A 15 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 56 (126)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHH
Confidence 467778888888888888888888888754444444444443
No 200
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=87.77 E-value=0.15 Score=43.55 Aligned_cols=40 Identities=28% Similarity=0.277 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-||++.|||++.+|..|.|||.++......+.+.-+.
T Consensus 68 ~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll 107 (229)
T 2vge_A 68 SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV 107 (229)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4455566666666666666666666654333333333333
No 201
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=87.71 E-value=0.27 Score=36.02 Aligned_cols=59 Identities=17% Similarity=0.436 Sum_probs=35.3
Q ss_pred ccCCCCCCcchhhccccccccccccCCceEEeC-CCCee-cchhhHhcCCCCCCCCccccc
Q psy7970 110 KKCLICREPVEKRIKIEECMVCSLKKASVLFKP-CYHMV-ACESCASLMKKCVQCRTQIDH 168 (290)
Q Consensus 110 ~~Cp~Cr~~i~~~~~i~~C~~C~~~~~~~~~~P-CgH~~-~C~~Ca~~~~~Cp~Cr~~i~~ 168 (290)
..||.|.+++....+.+.|..|........|=| ||+.. .|..|+..-.-|+.|+.-|.+
T Consensus 3 ~~CP~C~~~l~~~~~~~~C~~C~~~~~~~afCPeCgq~Le~lkACGA~~yFC~~C~~LiSk 63 (81)
T 2jrp_A 3 ITCPVCHHALERNGDTAHCETCAKDFSLQALCPDCRQPLQVLKACGAVDYFCQNGHGLISK 63 (81)
T ss_dssp CCCSSSCSCCEECSSEEECTTTCCEEEEEEECSSSCSCCCEEEETTEEEECCTTTTCCCCT
T ss_pred CCCCCCCCccccCCCceECccccccCCCcccCcchhhHHHHHHhcCCcCeeeccCCCEeec
Confidence 469999999988777778888877655555444 33331 133444444445555544443
No 202
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=87.26 E-value=0.14 Score=47.60 Aligned_cols=28 Identities=32% Similarity=0.752 Sum_probs=19.4
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
.++.||+++|||++++|..|.|||+++.
T Consensus 282 ~~v~~LL~~Gad~~~~d~~G~TpL~~A~ 309 (368)
T 3jue_A 282 GLACLFLKRGADLGARDSEGRDPLTIAM 309 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHCcCCCCCcCCCCCCHHHHHH
Confidence 4566777777777777777777777663
No 203
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=87.09 E-value=0.64 Score=39.52 Aligned_cols=43 Identities=19% Similarity=0.224 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCCCCcccc-cCCCCCCCCC--CCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKN-KKGQTPLDLC--PDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n-~~g~tpldl~--~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|||++.++ ..|.|||+++ ......+.+.-+.+.
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 467889999999999985 7999999999 666666666655544
No 204
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=86.75 E-value=0.15 Score=42.58 Aligned_cols=24 Identities=21% Similarity=0.340 Sum_probs=9.1
Q ss_pred HHHHhCCCCCcccccCCCCCCCCC
Q psy7970 18 CFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 18 cfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
-+|++.|+|++.+|..|.|||+++
T Consensus 167 ~~Ll~~g~~~~~~~~~g~t~L~~A 190 (241)
T 1k1a_A 167 QLLLQHGANVNAQMYSGSSALHSA 190 (241)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHH
Confidence 333333333333333333333333
No 205
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=86.67 E-value=0.14 Score=44.80 Aligned_cols=42 Identities=24% Similarity=0.380 Sum_probs=33.5
Q ss_pred HHHHHHHHh-CCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAG-NGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~-~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++ .|||++++|.+|+|||+++......+.+.-+.+
T Consensus 229 ~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~ 271 (276)
T 4hbd_A 229 KEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYS 271 (276)
T ss_dssp HHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 367889999 999999999999999999966655555555543
No 206
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=86.62 E-value=0.26 Score=39.96 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=29.8
Q ss_pred HHHHHHHhCCCCCcccc-cCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKN-KKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n-~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|||++.++ ..|.|||+++......+.+.-+.+
T Consensus 90 ~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 131 (183)
T 3deo_A 90 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 131 (183)
T ss_dssp HHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHH
Confidence 57788888999998887 888899988855444444444443
No 207
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=86.42 E-value=0.2 Score=41.77 Aligned_cols=27 Identities=26% Similarity=0.338 Sum_probs=15.1
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++.|+|++.+|..|.|||+++
T Consensus 120 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A 146 (231)
T 3aji_A 120 EIAVMLLEGGANPDAKDHYDATAMHRA 146 (231)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 455555555555555555555555555
No 208
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=86.28 E-value=0.2 Score=41.94 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 125 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 125 DLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 5667777777777777777777777764433333443333
No 209
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=86.28 E-value=0.19 Score=43.17 Aligned_cols=27 Identities=30% Similarity=0.550 Sum_probs=21.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++.|||++.+|..|.|||+++
T Consensus 125 ~~v~~Ll~~ga~~~~~d~~g~t~l~~A 151 (244)
T 3ui2_A 125 EVVEALVELGADIEVEDERGLTALELA 151 (244)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 567778888888888888888887776
No 210
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=86.20 E-value=0.14 Score=44.95 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=13.4
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++.|+|++.+|..|.|||.++
T Consensus 133 ~~~~~Ll~~g~~~n~~d~~g~TpL~~A 159 (269)
T 4b93_B 133 QVVKCLLDSNAKPNKKDLSGNTPLIYA 159 (269)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCCHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 344445555555555555555555444
No 211
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=86.20 E-value=0.29 Score=45.22 Aligned_cols=27 Identities=33% Similarity=0.501 Sum_probs=17.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.|+-+|+++|||++.+|.+|+|||+++
T Consensus 358 ~iv~~Ll~~ga~~~~~~~~g~t~l~~A 384 (437)
T 1n11_A 358 DIVTLLLKNGASPNEVSSDGTTPLAIA 384 (437)
T ss_dssp HHHHHHHHTTCCSCCCCSSSCCHHHHH
T ss_pred HHHHHHHHCcCCCCCCCCCCCCHHHHH
Confidence 455666666666666666666666665
No 212
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=86.14 E-value=0.2 Score=39.92 Aligned_cols=26 Identities=31% Similarity=0.419 Sum_probs=12.9
Q ss_pred HHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 16 IACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 16 iacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
++-+|++.|+|++.+|..|.|||.++
T Consensus 84 ~v~~Ll~~g~~~~~~~~~g~t~L~~A 109 (172)
T 3v30_A 84 IVGLLLERDVDINIYDWNGGTPLLYA 109 (172)
T ss_dssp HHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 44444555555555555555555444
No 213
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=86.01 E-value=0.17 Score=40.11 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
..++-+|++.|+|++..|..|.|||.++......+.+.-+.
T Consensus 49 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 89 (167)
T 3v31_A 49 IAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLL 89 (167)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 46778888888888888888888888884444444444333
No 214
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=85.77 E-value=0.2 Score=44.18 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=11.7
Q ss_pred HHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 16 IACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 16 iacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
++-+|++.|||++.+|..|+|||+++
T Consensus 262 ~v~~Ll~~ga~~n~~d~~g~t~L~~A 287 (351)
T 3utm_A 262 VMEVLHKHGAKMNALDSLGQTALHRA 287 (351)
T ss_dssp HHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 33444444444444444444444444
No 215
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=85.74 E-value=0.2 Score=44.63 Aligned_cols=41 Identities=24% Similarity=0.485 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.|+-+|++.|||++.+|..|.|||.++........+..+.+
T Consensus 220 ~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~ 260 (337)
T 4g8k_A 220 AITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 260 (337)
T ss_dssp HHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHH
Confidence 57788999999999999999999988866665566555553
No 216
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=85.56 E-value=0.18 Score=44.95 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCCCcccccC-CCCCCCCCCCchhHHHHHhhhhc
Q psy7970 15 SIACFLAGNGADLSIKNKK-GQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~-g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
.++-+|+++|||+++++.+ |.|||.++..-...+.+.-+++.
T Consensus 39 ~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ 81 (337)
T 4g8k_A 39 DLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 81 (337)
T ss_dssp HHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 5788999999999998765 89999998555545555555443
No 217
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=85.53 E-value=0.64 Score=31.83 Aligned_cols=42 Identities=5% Similarity=-0.051 Sum_probs=34.9
Q ss_pred cccccccccCCceEEe-CCCCeecchhhHhc----CCCCCCCCccccc
Q psy7970 126 EECMVCSLKKASVLFK-PCYHMVACESCASL----MKKCVQCRTQIDH 168 (290)
Q Consensus 126 ~~C~~C~~~~~~~~~~-PCgH~~~C~~Ca~~----~~~Cp~Cr~~i~~ 168 (290)
+.|.++++...+.++. ++||. ++..+..+ -..||+.++++..
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~-yer~~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTI-FEKSLLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEE-EEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred EEecCCCCCCCCCEEeCCCCcE-EcHHHHHHHHHhCCCCcCCcCCCCh
Confidence 4688888888899999 99999 99999954 3579999988754
No 218
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=85.44 E-value=0.21 Score=41.32 Aligned_cols=42 Identities=19% Similarity=0.161 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|..|.|||.++......+.+..+.+
T Consensus 105 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 146 (223)
T 2f8y_A 105 EGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLK 146 (223)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 357778888888888888888888887754444444444443
No 219
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=85.16 E-value=0.4 Score=37.49 Aligned_cols=42 Identities=14% Similarity=0.065 Sum_probs=34.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|+++|+|++.+|..|.|||.++.. ...+.+..+.+.
T Consensus 18 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 59 (162)
T 1ihb_A 18 LEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR 59 (162)
T ss_dssp HHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT
T ss_pred HHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHc
Confidence 467888999999999999999999999877 666666666644
No 220
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=85.12 E-value=0.063 Score=45.89 Aligned_cols=42 Identities=26% Similarity=0.309 Sum_probs=34.0
Q ss_pred HHHHHHHhCCCCC-------cccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 15 SIACFLAGNGADL-------SIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 15 aiacfL~~~Gadl-------~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
.++-+|++.|||+ +.+|..|+|||+++......+.+.-+.++
T Consensus 195 ~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 195 HMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQR 243 (256)
T ss_dssp HHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhC
Confidence 3889999999999 99999999999999666555555555544
No 221
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=84.94 E-value=0.26 Score=45.77 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=28.1
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-||+++|||++.+|..|.|||+++........+.-+++
T Consensus 249 ~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~ 289 (368)
T 3jue_A 249 LACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLK 289 (368)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 56777888888888888888888887754444444444443
No 222
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=84.88 E-value=0.25 Score=40.96 Aligned_cols=40 Identities=30% Similarity=0.375 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||+++......+.+.-+.
T Consensus 121 ~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 160 (228)
T 2dzn_A 121 EVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC 160 (228)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5666777777777777777777777764444444444444
No 223
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=84.67 E-value=0.32 Score=42.76 Aligned_cols=29 Identities=24% Similarity=0.248 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
..++-+|++.|||++++|..|+||++++.
T Consensus 293 ~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 293 LQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred HHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 36788999999999999999999999984
No 224
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=84.57 E-value=0.045 Score=46.85 Aligned_cols=45 Identities=16% Similarity=0.202 Sum_probs=36.4
Q ss_pred HHHHHHHHhCCCCC-------cccccCCCCCCCCCCCchhHHHHHhhhhccc
Q psy7970 14 ASIACFLAGNGADL-------SIKNKKGQTPLDLCPDPNLCKALTKCYKDKE 58 (290)
Q Consensus 14 ~aiacfL~~~Gadl-------~~~n~~g~tpldl~~d~~~~~~l~~~~~~~~ 58 (290)
..++-+|++.|||+ +++|..|.|||+++......+.+.-+.++..
T Consensus 198 ~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 198 TKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 36777999999999 7899999999999977766666666665543
No 225
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=84.23 E-value=0.19 Score=41.98 Aligned_cols=27 Identities=22% Similarity=0.067 Sum_probs=13.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~ 41 (290)
.++-+|++.|+|++.+|..|.|||.++
T Consensus 87 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A 113 (222)
T 3ehr_A 87 SWLRECLDNRVGVNGLDKAGSTALYWA 113 (222)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHhCCCCccccCCCCCCHHHHH
Confidence 344444444444444444444544444
No 226
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=84.18 E-value=0.25 Score=45.68 Aligned_cols=40 Identities=25% Similarity=0.332 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-||+++|||++.+|..|.|||+++......+.+.-+.
T Consensus 325 ~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll 364 (437)
T 1n11_A 325 KLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 364 (437)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHH
Confidence 3555666666666666666666666654433333333333
No 227
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=83.98 E-value=0.28 Score=44.02 Aligned_cols=30 Identities=13% Similarity=0.152 Sum_probs=26.9
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCC
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPD 43 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d 43 (290)
..++-+|++.|||++.+|..|.|||.++..
T Consensus 144 ~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 144 LELVKHLVKHGSNRLYGDNMGESCLVKAVK 173 (327)
T ss_dssp HHHHHHHHHTTCCTTBCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 367889999999999999999999999854
No 228
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=83.87 E-value=0.25 Score=41.49 Aligned_cols=43 Identities=26% Similarity=0.281 Sum_probs=33.1
Q ss_pred HHHHHHHHhCCCCCccccc-CCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNK-KGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~-~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|+|++.+|. .|.|||+++......+.+.-+.+.
T Consensus 130 ~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 130 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173 (236)
T ss_dssp HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3678899999999999997 999999998655555555555543
No 229
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=83.65 E-value=0.33 Score=41.21 Aligned_cols=42 Identities=24% Similarity=0.473 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|..|.|||+++......+.++.+.+
T Consensus 199 ~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 199 EAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 578888999999999999999999988865555555555554
No 230
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=83.49 E-value=0.27 Score=39.91 Aligned_cols=41 Identities=22% Similarity=0.264 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
..++-+|++.|+|++.+|..|.|||.++......+.+..+.
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 92 (201)
T 3hra_A 52 IEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML 92 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 36778899999999999999999999885555555555554
No 231
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=83.28 E-value=0.33 Score=41.57 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCCcccc-cCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKN-KKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n-~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-||++.|||++.++ ..|.|||.++........+.-+.+
T Consensus 91 ~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 132 (244)
T 3ui2_A 91 KCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132 (244)
T ss_dssp HHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 56778888888888877 778888888855554555555544
No 232
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=82.92 E-value=0.31 Score=41.41 Aligned_cols=29 Identities=21% Similarity=0.302 Sum_probs=20.2
Q ss_pred HHHHHHHHHhC-CCCCcccccCCCCCCCCC
Q psy7970 13 SASIACFLAGN-GADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 13 ~~aiacfL~~~-Gadl~~~n~~g~tpldl~ 41 (290)
...++-+|+++ |+|++..|..|.|||.++
T Consensus 160 ~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a 189 (285)
T 1wdy_A 160 HVEVLKILLDEMGADVNACDNMGRNALIHA 189 (285)
T ss_dssp CHHHHHHHHHTSCCCTTCCCTTSCCHHHHH
T ss_pred CHHHHHHHHHhcCCCCCccCCCCCCHHHHH
Confidence 34666677766 777777777777777666
No 233
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=82.86 E-value=0.63 Score=31.83 Aligned_cols=46 Identities=22% Similarity=0.485 Sum_probs=29.7
Q ss_pred CCCCCccccccccCcceEeecCCCcc----cccchhhh------hccCCCCCCcch
Q psy7970 75 MVTLDECRICSDLKRDILFQPCGHVA----CCSVCAPR------VKKCLICREPVE 120 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~~~~PCgH~~----~C~~Ca~~------~~~Cp~Cr~~i~ 120 (290)
..+...|.||++..-+-++.||.+.. +=..|..+ -..||+|+..+.
T Consensus 3 ~~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 3 DEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp TCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 34567899999876666789976432 11224332 257999998764
No 234
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=82.76 E-value=0.63 Score=40.25 Aligned_cols=39 Identities=21% Similarity=0.318 Sum_probs=22.4
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
.++-+|+++|||++..|..|.|||.++......+.+.-+
T Consensus 87 ~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~L 125 (299)
T 1s70_B 87 DMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 456666666666666666666666666433333333333
No 235
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=82.16 E-value=0.36 Score=41.03 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=26.6
Q ss_pred HHHHHHHHh---CCCCCcccccCCCCCCCCCC
Q psy7970 14 ASIACFLAG---NGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 14 ~aiacfL~~---~Gadl~~~n~~g~tpldl~~ 42 (290)
..++-+|++ .|||++.+|..|.|||+++.
T Consensus 149 ~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~ 180 (256)
T 2etb_A 149 WDVVTYLLENPHQPASLEATDSLGNTVLHALV 180 (256)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHhccccCCCcCccCCCCCCHHHHHH
Confidence 468889999 99999999999999999985
No 236
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=81.79 E-value=0.31 Score=40.64 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=32.8
Q ss_pred HHHHHHhCCCCC------cccccCCCCCCCCCCCchhHHHHHhhhhcc
Q psy7970 16 IACFLAGNGADL------SIKNKKGQTPLDLCPDPNLCKALTKCYKDK 57 (290)
Q Consensus 16 iacfL~~~Gadl------~~~n~~g~tpldl~~d~~~~~~l~~~~~~~ 57 (290)
+.-+|++.|+|. +.+|..|+|||+++......+.++-+.++.
T Consensus 173 i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 173 MYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp HHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 458999999998 689999999999996665555555555443
No 237
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=81.38 E-value=0.32 Score=42.66 Aligned_cols=41 Identities=27% Similarity=0.203 Sum_probs=28.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|+++|||++.+|..|.|||.++......+.+.-+.+
T Consensus 76 ~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 116 (285)
T 3kea_A 76 KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVK 116 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 56778888888888888888888888754444444444443
No 238
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=80.96 E-value=0.38 Score=39.74 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=24.5
Q ss_pred HHHHHHHhCC-CCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNG-ADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~G-adl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.| +|++.+|..|.|||+++......+.+..+.
T Consensus 154 ~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 154 KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4666777777 777777777777777764444334444333
No 239
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=80.91 E-value=0.41 Score=41.07 Aligned_cols=28 Identities=25% Similarity=0.127 Sum_probs=15.2
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCC
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~ 42 (290)
.++-+|++.|+|++.+|..|.|||.++.
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 50 SCVKILLKHGAQVNGVTADWHTPLFNAC 77 (261)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 3445555555555555555555555553
No 240
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=80.38 E-value=0.45 Score=40.41 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=26.7
Q ss_pred HHHHHHHHh---CCCCCcccccCCCCCCCCCC
Q psy7970 14 ASIACFLAG---NGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 14 ~aiacfL~~---~Gadl~~~n~~g~tpldl~~ 42 (290)
..++-+|++ .|||++.+|..|.|||+++.
T Consensus 153 ~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~ 184 (260)
T 3jxi_A 153 PHIVHYLTENGHKQADLRRQDSRGNTVLHALV 184 (260)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHhccccCCCCcccCCCCCcHHHHHH
Confidence 367889999 99999999999999999986
No 241
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=80.14 E-value=0.31 Score=41.46 Aligned_cols=42 Identities=14% Similarity=0.032 Sum_probs=33.0
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
..++-+|++.|+|++.+|..|.|||.++......+.+.-+.+
T Consensus 50 ~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~ 91 (239)
T 1ycs_B 50 FDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQ 91 (239)
T ss_dssp HHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 367889999999999999999999999955544444444443
No 242
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=80.07 E-value=0.8 Score=34.43 Aligned_cols=48 Identities=21% Similarity=0.472 Sum_probs=37.3
Q ss_pred cCCCccccccccccccccccCCccchHHHhcCC----CCCCCcccccccccC
Q psy7970 242 KEQTMCPVCLDRLKNMIFLCGHGTCQMCGDRMS----ECPICRKAVEKRILL 289 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~~CGH~fC~~C~~~~~----~CP~CR~~i~~~~~~ 289 (290)
--...|..|+-..++-|.-.-|.+|..|+..+. .||+|.+++..++.+
T Consensus 26 ~G~~nCKsCWf~~k~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 26 LGPQFCKSCWFENKGLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp SCCCCCCSSCSCCSSEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred cCcccChhhccccCCeeeecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 355889999988886544456899999999774 599999998766543
No 243
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=80.04 E-value=0.47 Score=40.78 Aligned_cols=29 Identities=31% Similarity=0.365 Sum_probs=26.6
Q ss_pred HHHHHHHHh---CCCCCcccccCCCCCCCCCC
Q psy7970 14 ASIACFLAG---NGADLSIKNKKGQTPLDLCP 42 (290)
Q Consensus 14 ~aiacfL~~---~Gadl~~~n~~g~tpldl~~ 42 (290)
..++-||++ .|||++.+|.+|.|||+++.
T Consensus 161 ~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~ 192 (273)
T 2pnn_A 161 LAIVKFLLQNSWQPADISARDSVGNTVLHALV 192 (273)
T ss_dssp HHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHhcccCCCCceeeCCCCCcHHHHHH
Confidence 368889999 99999999999999999984
No 244
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=79.81 E-value=0.36 Score=39.16 Aligned_cols=39 Identities=23% Similarity=0.167 Sum_probs=22.1
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
.++-+|++.|+|++..|..|.|||.++......+.+.-+
T Consensus 82 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (192)
T 2rfm_A 82 GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120 (192)
T ss_dssp HHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Confidence 455666666666666666666666666433333333333
No 245
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=78.07 E-value=0.59 Score=42.62 Aligned_cols=40 Identities=20% Similarity=0.256 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|+++|||++.+|..|.|||+++......+.+..+.
T Consensus 180 ~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 180 RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 4566667777777766777777766664444344444333
No 246
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=77.21 E-value=0.59 Score=40.82 Aligned_cols=40 Identities=13% Similarity=-0.020 Sum_probs=23.0
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++.+|..|.|||.++......+.+..+.
T Consensus 73 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll 112 (285)
T 3d9h_A 73 LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILL 112 (285)
T ss_dssp HHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHH
Confidence 5566666666666666666666666664333333333333
No 247
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=76.76 E-value=0.59 Score=40.12 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=33.8
Q ss_pred HHHHHHHhCCCCCccccc--------------CCCCCCCCCCCchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSIKNK--------------KGQTPLDLCPDPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~--------------~g~tpldl~~d~~~~~~l~~~~~ 55 (290)
.++-+|++.|||++.+|. .|.|||.++......+.+.-+.+
T Consensus 115 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 169 (273)
T 2pnn_A 115 TLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQ 169 (273)
T ss_dssp HHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHh
Confidence 578899999999999997 89999999966666666666664
No 248
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=75.85 E-value=0.65 Score=38.59 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhh
Q psy7970 15 SIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCY 54 (290)
Q Consensus 15 aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~ 54 (290)
.++-+|++.|+|++..|..|.|||.++......+.+..+.
T Consensus 60 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 99 (241)
T 1k1a_A 60 SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALL 99 (241)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 5666777777777777777777777774433334433333
No 249
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=75.30 E-value=1.2 Score=39.82 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=24.2
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhh
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKC 53 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~ 53 (290)
..++-+|++.|||++.+|..|.|||.++......+.+..+
T Consensus 153 ~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~L 192 (364)
T 3ljn_A 153 LEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLM 192 (364)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4666677777777777777777777766433333333333
No 250
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=75.02 E-value=0.35 Score=42.42 Aligned_cols=43 Identities=16% Similarity=0.132 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCCCCcccccCCCCC-CCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTP-LDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tp-ldl~~d~~~~~~l~~~~~~ 56 (290)
..++-||++.|||++.+|..|+|| |+++......+.+.-+.+.
T Consensus 174 ~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ 217 (285)
T 3kea_A 174 VDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217 (285)
T ss_dssp HHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTS
T ss_pred HHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHc
Confidence 367889999999999999999998 9888666656666655543
No 251
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=72.53 E-value=0.85 Score=36.83 Aligned_cols=27 Identities=26% Similarity=0.309 Sum_probs=18.1
Q ss_pred HHHHHHHhCC-CCCcccccCCCCCCCCC
Q psy7970 15 SIACFLAGNG-ADLSIKNKKGQTPLDLC 41 (290)
Q Consensus 15 aiacfL~~~G-adl~~~n~~g~tpldl~ 41 (290)
.++-+|++.| +|++.+|..|.|||+++
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 120 DNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp HHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 4566666666 66666666777776666
No 252
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=70.13 E-value=1.2 Score=36.57 Aligned_cols=43 Identities=16% Similarity=0.047 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCCCCcccccCCCCCCCCCCCchhHHHHHhhhhc
Q psy7970 14 ASIACFLAGNGADLSIKNKKGQTPLDLCPDPNLCKALTKCYKD 56 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~~n~~g~tpldl~~d~~~~~~l~~~~~~ 56 (290)
..++-+|++.|+|++..|..|.|||.++......+.+..+.+.
T Consensus 22 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 64 (240)
T 3eu9_A 22 YERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISK 64 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred hHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 4678899999999999999999999998555545555555543
No 253
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=70.09 E-value=0.78 Score=41.01 Aligned_cols=44 Identities=16% Similarity=0.206 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCCCCcc-cccCCCCCCCCCCCchhHHHHHhhhhcc
Q psy7970 14 ASIACFLAGNGADLSI-KNKKGQTPLDLCPDPNLCKALTKCYKDK 57 (290)
Q Consensus 14 ~aiacfL~~~Gadl~~-~n~~g~tpldl~~d~~~~~~l~~~~~~~ 57 (290)
..+.-+|...|+|++. +|..|.|||.++......+.++.+++..
T Consensus 110 ~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G 154 (327)
T 1sw6_A 110 QEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG 154 (327)
T ss_dssp HHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC
Confidence 3678899999999999 9999999999996666666666666543
No 254
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=65.76 E-value=1.9 Score=35.28 Aligned_cols=55 Identities=25% Similarity=0.492 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHhc------------cCCCcccccccccccc----cc-c-cCCccchHHHhc-----CCCCCCCccc
Q psy7970 228 TSDIQKLQQQLQDI------------KEQTMCPVCLDRLKNM----IF-L-CGHGTCQMCGDR-----MSECPICRKA 282 (290)
Q Consensus 228 ~~~~~~l~~~~~~l------------~e~~~C~IC~~~~~~~----v~-~-CGH~fC~~C~~~-----~~~CP~CR~~ 282 (290)
.+.+.+|+++++++ ..+..|.+|...|.-. .+ . |.|.+|..|... .|.|-+|++.
T Consensus 40 eeRi~kLk~~l~~~~~k~~~~~~~~~~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 40 EERLQGLKGKIQKESSKRELLSDTAHLNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSHAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSTTGGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEECCSSSSSCEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcccccCCCccchhhcCccccccCCCCcCCCCCchhhcccccccCCCCcEeeHHHHHH
Confidence 45566676666554 1578999999975432 22 2 999999999853 3678777654
No 255
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=64.55 E-value=1.3 Score=35.48 Aligned_cols=55 Identities=24% Similarity=0.582 Sum_probs=38.9
Q ss_pred hhHHHHHHHHHHhcc------CCCccccccccccc---c-cc-c-cCCccchHHHhcC--------CCCCCCccc
Q psy7970 228 TSDIQKLQQQLQDIK------EQTMCPVCLDRLKN---M-IF-L-CGHGTCQMCGDRM--------SECPICRKA 282 (290)
Q Consensus 228 ~~~~~~l~~~~~~l~------e~~~C~IC~~~~~~---~-v~-~-CGH~fC~~C~~~~--------~~CP~CR~~ 282 (290)
.+.+.+|++++++++ .+..|.+|...+.- . .. . |.|.+|..|.... |.|-+|++.
T Consensus 33 ~~ri~kL~~~l~~~k~~~~~~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 33 QERIGRLVDRLETMRKNVAGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp HHHHHHHHHHHHHHHHTCCSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 456777777777664 56789999997731 1 22 2 9999999998833 567777654
No 256
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.82 E-value=9.7 Score=27.01 Aligned_cols=27 Identities=19% Similarity=0.400 Sum_probs=18.5
Q ss_pred CCCCeecchhhHhc----C--CCCCCCCcccccc
Q psy7970 142 PCYHMVACESCASL----M--KKCVQCRTQIDHM 169 (290)
Q Consensus 142 PCgH~~~C~~Ca~~----~--~~Cp~Cr~~i~~~ 169 (290)
.|+|. +=..|..+ . ..||.||......
T Consensus 33 ~C~h~-fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 33 TCGIR-MHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSCCE-ECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCch-hhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 47776 44778752 2 6899999886543
No 257
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=56.77 E-value=5.7 Score=41.54 Aligned_cols=49 Identities=14% Similarity=0.189 Sum_probs=40.6
Q ss_pred hccCCCccccccccccccccc-cC-CccchHHHhcC----CCCCCCccccccccc
Q psy7970 240 DIKEQTMCPVCLDRLKNMIFL-CG-HGTCQMCGDRM----SECPICRKAVEKRIL 288 (290)
Q Consensus 240 ~l~e~~~C~IC~~~~~~~v~~-CG-H~fC~~C~~~~----~~CP~CR~~i~~~~~ 288 (290)
++.+.+.|||=.+.+.|||+. -| ++|=+..|.+| .+||+-|+++....+
T Consensus 887 ~iP~~F~cPIs~~lM~DPVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~l 941 (968)
T 3m62_A 887 DVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDV 941 (968)
T ss_dssp CSCGGGBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGC
T ss_pred CCcHHhCCcchhhHHhCCeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccc
Confidence 445678999999999999886 67 58999999987 379999999876543
No 258
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=47.76 E-value=20 Score=31.04 Aligned_cols=58 Identities=19% Similarity=0.398 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHhc-c-CCCcccccccccccccc-c-cCCccchHHHhcCC------CCCCCcccccc
Q psy7970 228 TSDIQKLQQQLQDI-K-EQTMCPVCLDRLKNMIF-L-CGHGTCQMCGDRMS------ECPICRKAVEK 285 (290)
Q Consensus 228 ~~~~~~l~~~~~~l-~-e~~~C~IC~~~~~~~v~-~-CGH~fC~~C~~~~~------~CP~CR~~i~~ 285 (290)
+.-+-+|+.-+.+. . ....|.||.+....-.. . |+|.|=..|+..|+ .||.|+.+...
T Consensus 162 ~R~l~El~~~l~~~~~~~i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~ 229 (238)
T 3nw0_A 162 GRAILEMEQYIRETYPDAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPH 229 (238)
T ss_dssp HHHHHHHHHHHHHHCTTTCCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCS
T ss_pred CccHHHHHHHHHHhcCCCCCcCcchhhHHhCCcccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 45555666655543 2 36889999998886544 3 88888889998763 79999988754
No 259
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=47.06 E-value=17 Score=27.21 Aligned_cols=49 Identities=18% Similarity=0.508 Sum_probs=39.2
Q ss_pred CCCCCccccccccCcceEeecCCCcccccchhhhh----ccCCCCCCcchhhccc
Q psy7970 75 MVTLDECRICSDLKRDILFQPCGHVACCSVCAPRV----KKCLICREPVEKRIKI 125 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~~~~PCgH~~~C~~Ca~~~----~~Cp~Cr~~i~~~~~i 125 (290)
.....-|..|+-..+ -|+-|..-.+|..|-..| ..||+|..++..++++
T Consensus 25 ~~G~~nCKsCWf~~k--~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 25 HLGPQFCKSCWFENK--GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CSCCCCCCSSCSCCS--SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred ccCcccChhhccccC--CeeeecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 344568999988766 566788777899999876 6899999999887765
No 260
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=46.99 E-value=11 Score=34.95 Aligned_cols=48 Identities=19% Similarity=0.353 Sum_probs=31.4
Q ss_pred CCCCCccccccccCcceE--------eecCCCcccccchhhh---------------hccCCCCCCcchhhc
Q psy7970 75 MVTLDECRICSDLKRDIL--------FQPCGHVACCSVCAPR---------------VKKCLICREPVEKRI 123 (290)
Q Consensus 75 ~~~~~~C~iC~~~~~~~~--------~~PCgH~~~C~~Ca~~---------------~~~Cp~Cr~~i~~~~ 123 (290)
.....+|.||++...+.- ..+|||.. =..|-.+ ...||.||++|....
T Consensus 305 ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~F-H~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~sf 375 (381)
T 3k1l_B 305 DNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKC-HAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTSF 375 (381)
T ss_dssp CCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCB-CSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGGG
T ss_pred ccCCccCcccceeecCCCCCccccccCCccCCcc-chHHHHHHHHhCCCccccccccCCCCCCCCCcCCccH
Confidence 345679999998776511 23688875 3444422 147999999987544
No 261
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=45.92 E-value=1.3 Score=40.98 Aligned_cols=41 Identities=2% Similarity=-0.074 Sum_probs=33.5
Q ss_pred HHHHHHHhCCCCCcc--cccCCCCCCCCCC-CchhHHHHHhhhh
Q psy7970 15 SIACFLAGNGADLSI--KNKKGQTPLDLCP-DPNLCKALTKCYK 55 (290)
Q Consensus 15 aiacfL~~~Gadl~~--~n~~g~tpldl~~-d~~~~~~l~~~~~ 55 (290)
.++-+|+++|||++. .|.+|.|||+++. .....+.++-+.+
T Consensus 177 eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 177 HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred HHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHh
Confidence 678899999999887 8999999999998 7776666666654
No 262
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=45.21 E-value=9.6 Score=35.51 Aligned_cols=43 Identities=23% Similarity=0.475 Sum_probs=32.8
Q ss_pred CCccccccccccccccc--cCCccchHHH--------hcCCCCCCCccccccc
Q psy7970 244 QTMCPVCLDRLKNMIFL--CGHGTCQMCG--------DRMSECPICRKAVEKR 286 (290)
Q Consensus 244 ~~~C~IC~~~~~~~v~~--CGH~fC~~C~--------~~~~~CP~CR~~i~~~ 286 (290)
.+.||+=...+..|+.. |.|.-|.+=. ...|.||+|.+.+.-.
T Consensus 249 SL~CPlS~~ri~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~ 301 (371)
T 3i2d_A 249 SLQCPISYTRMKYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALE 301 (371)
T ss_dssp ESBCTTTSSBCSSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGG
T ss_pred eecCCCccccccccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHH
Confidence 48999999999999773 9998554432 1348999999887543
No 263
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=45.15 E-value=11 Score=27.48 Aligned_cols=31 Identities=29% Similarity=0.791 Sum_probs=25.8
Q ss_pred CCCccccccccccccccc-c----CCccchHHHhcC
Q psy7970 243 EQTMCPVCLDRLKNMIFL-C----GHGTCQMCGDRM 273 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~~-C----GH~fC~~C~~~~ 273 (290)
..+.|-+|.+.+.+.-|. | +|.||..|.+..
T Consensus 14 a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~s 49 (93)
T 2cs3_A 14 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRES 49 (93)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHH
T ss_pred CeeEeecchhhhccCceeeCCCccCCeeeccccHHH
Confidence 458999999999999763 5 589999998853
No 264
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=42.78 E-value=18 Score=26.20 Aligned_cols=57 Identities=25% Similarity=0.564 Sum_probs=36.0
Q ss_pred ccCCCCCCcchh---hccc---------cccccccccCCceEE-eCCCCeecchhhHhcC--CCCCCCCcccc
Q psy7970 110 KKCLICREPVEK---RIKI---------EECMVCSLKKASVLF-KPCYHMVACESCASLM--KKCVQCRTQID 167 (290)
Q Consensus 110 ~~Cp~Cr~~i~~---~~~i---------~~C~~C~~~~~~~~~-~PCgH~~~C~~Ca~~~--~~Cp~Cr~~i~ 167 (290)
..|+.|..+|.. .+.+ ..|..|........| .--|.. .|..|..+. .+|..|+++|.
T Consensus 6 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~-yC~~cy~~~~~~~C~~C~~~I~ 77 (101)
T 2cup_A 6 SGCVECRKPIGADSKEVHYKNRFWHDTCFRCAKCLHPLANETFVAKDNKI-LCNKCTTREDSPKCKGCFKAIV 77 (101)
T ss_dssp CBCSSSCCBCCSSSCEEEETTEEEETTTCCCSSSCCCTTSSCCEEETTEE-ECHHHHTTCCCCBCSSSCCBCC
T ss_pred CcCcccCCcccCCceEEEECccChhhcCCcccccCCCCCcCeeECcCCEE-EChhHhhhhcCCccccCCCccc
Confidence 568888888852 2221 244555544443323 334544 899999765 69999999986
No 265
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=41.63 E-value=23 Score=24.07 Aligned_cols=35 Identities=29% Similarity=0.767 Sum_probs=26.8
Q ss_pred Cccccccccccccc-cc---cCCccchHHHh----cCCCCCCC
Q psy7970 245 TMCPVCLDRLKNMI-FL---CGHGTCQMCGD----RMSECPIC 279 (290)
Q Consensus 245 ~~C~IC~~~~~~~v-~~---CGH~fC~~C~~----~~~~CP~C 279 (290)
..|-.|+..+.+.. +. |++.||.+|-. .+..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 56999999886653 42 99999999966 34579987
No 266
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=40.97 E-value=12 Score=34.68 Aligned_cols=44 Identities=27% Similarity=0.419 Sum_probs=33.2
Q ss_pred CCCccccccccccccccc--cCCccchHHHh--------cCCCCCCCccccccc
Q psy7970 243 EQTMCPVCLDRLKNMIFL--CGHGTCQMCGD--------RMSECPICRKAVEKR 286 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~~--CGH~fC~~C~~--------~~~~CP~CR~~i~~~ 286 (290)
-.+.||+=...+..|+.. |.|.-|.+=.. ..|.||+|.+.+.-.
T Consensus 214 vSL~CPlS~~ri~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~ 267 (360)
T 4fo9_A 214 VSLMCPLGKMRLTIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYE 267 (360)
T ss_dssp EESBCTTTCSBCSSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGG
T ss_pred EeeeCCCccceeccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHH
Confidence 357899999999999773 99985543322 348999999987543
No 267
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=40.14 E-value=6.1 Score=29.80 Aligned_cols=24 Identities=17% Similarity=0.491 Sum_probs=14.2
Q ss_pred ccCCCCCCcchhhccccccccccc
Q psy7970 110 KKCLICREPVEKRIKIEECMVCSL 133 (290)
Q Consensus 110 ~~Cp~Cr~~i~~~~~i~~C~~C~~ 133 (290)
..||.|.+++...-..+-|..|..
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~ 56 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGE 56 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCC
T ss_pred ccCccCCCcceecCCEEECccccc
Confidence 467878777665444444555544
No 268
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=39.61 E-value=21 Score=27.17 Aligned_cols=58 Identities=12% Similarity=0.229 Sum_probs=38.7
Q ss_pred ccCCCCCCcchhhccc-----------cccccccccCC---ceEEeCCCCeecchhhHhcC--C--CCCCCCccccc
Q psy7970 110 KKCLICREPVEKRIKI-----------EECMVCSLKKA---SVLFKPCYHMVACESCASLM--K--KCVQCRTQIDH 168 (290)
Q Consensus 110 ~~Cp~Cr~~i~~~~~i-----------~~C~~C~~~~~---~~~~~PCgH~~~C~~Ca~~~--~--~Cp~Cr~~i~~ 168 (290)
..|..|..+|.....+ ..|..|..... ...+..-|.. .|..|-.+. . +|..|..+|..
T Consensus 6 ~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~-yC~~cy~~~f~~~~~C~~C~~~I~~ 81 (122)
T 1m3v_A 6 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMI-LCRNDYIRLFGNSGAGGSGGHMGSG 81 (122)
T ss_dssp CCBSSSSSCCCSSCCEEETTEEECHHHHCCSSSCCCTTTSEECCEEETTEE-ECHHHHHHHHCCCCSSSCSSCCSCC
T ss_pred CCCcccCCEeCCcEEEEECCceeHhhCCCcCCCCCcccccCCeEEEECCee-ecHHHHHHHcCCCCccccCCCCcCc
Confidence 4677788877665321 25666666554 2345556665 899999653 3 89999999875
No 269
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=38.88 E-value=29 Score=27.91 Aligned_cols=59 Identities=20% Similarity=0.379 Sum_probs=38.5
Q ss_pred hccCCCCCCcchhhcc--c---------cccccccccCCceEEeCCCCeecchhhHhcC--CCCCCCCccccc
Q psy7970 109 VKKCLICREPVEKRIK--I---------EECMVCSLKKASVLFKPCYHMVACESCASLM--KKCVQCRTQIDH 168 (290)
Q Consensus 109 ~~~Cp~Cr~~i~~~~~--i---------~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~--~~Cp~Cr~~i~~ 168 (290)
...|..|..+|..... + ..|..|........|.--|.. .|..|-.+. .+|..|+.+|..
T Consensus 6 ~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~f~~~g~~-yC~~~y~~~f~~~C~~C~~~I~~ 77 (169)
T 2rgt_A 6 IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESV-YCKDDFFKRFGTKCAACQLGIPP 77 (169)
T ss_dssp -CBBSSSSSBCCSSSCEECSSCEECTTTSBCTTTCCBCCSCCEESSSCE-ECHHHHHHHHSCBCTTTCCBCCT
T ss_pred CCccccCCCccCCcEEEEECCcEEccccCccCCCCCcCCCCCcccCCee-eecccccccccccccccccccCC
Confidence 4567778887765421 1 245555555544446666665 999998654 799999998864
No 270
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=38.67 E-value=16 Score=26.78 Aligned_cols=32 Identities=25% Similarity=0.461 Sum_probs=25.1
Q ss_pred ccCCCccccccccccccccc---cCCccchHHHhc
Q psy7970 241 IKEQTMCPVCLDRLKNMIFL---CGHGTCQMCGDR 272 (290)
Q Consensus 241 l~e~~~C~IC~~~~~~~v~~---CGH~fC~~C~~~ 272 (290)
+..+.+|.||--.-.+..++ |+-.|=..|+.+
T Consensus 12 ~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r 46 (89)
T 1wil_A 12 VVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRR 46 (89)
T ss_dssp CCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHH
T ss_pred CCCCcccCccccccccceeccccccccccHhhccc
Confidence 34678999999777666665 888888888885
No 271
>2jtn_A LIM domain-binding protein 1, LIM/homeobox protein LHX3; intramolecular (fusion) protein-protein complex, protein binding/transcription complex; NMR {Mus musculus}
Probab=37.44 E-value=29 Score=28.21 Aligned_cols=59 Identities=20% Similarity=0.379 Sum_probs=37.8
Q ss_pred hccCCCCCCcchhhcc--c---------cccccccccCCceEEeCCCCeecchhhHhcC--CCCCCCCccccc
Q psy7970 109 VKKCLICREPVEKRIK--I---------EECMVCSLKKASVLFKPCYHMVACESCASLM--KKCVQCRTQIDH 168 (290)
Q Consensus 109 ~~~Cp~Cr~~i~~~~~--i---------~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~--~~Cp~Cr~~i~~ 168 (290)
...|..|..+|..... . ..|..|........|.--|.. .|..|..+. .+|..|+.+|..
T Consensus 60 ~~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~f~~~g~~-yC~~~y~~~f~~kC~~C~~~I~~ 131 (182)
T 2jtn_A 60 IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESV-YCKDDFFKRFGTKCAACQLGIPP 131 (182)
T ss_dssp CCBCBTSSSBCCCSEEEEETTEEECSSTTSCTTTCCCCSSCCEEETTEE-ECHHHHHHTTSCCCTTTCCCCCS
T ss_pred CCcCccCCCCccCceeEEecCCeEccccCccCCCCCccCCCceeECCEe-eecCccccccccccccCCCccCC
Confidence 4577777777765421 1 244455554444445555655 899998765 699999998754
No 272
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=36.99 E-value=28 Score=26.31 Aligned_cols=58 Identities=21% Similarity=0.365 Sum_probs=37.6
Q ss_pred ccCCCCCCcchhh--ccc---------cccccccccCCce-EEeCCCCeecchhhHhcC--CCCCCCCccccc
Q psy7970 110 KKCLICREPVEKR--IKI---------EECMVCSLKKASV-LFKPCYHMVACESCASLM--KKCVQCRTQIDH 168 (290)
Q Consensus 110 ~~Cp~Cr~~i~~~--~~i---------~~C~~C~~~~~~~-~~~PCgH~~~C~~Ca~~~--~~Cp~Cr~~i~~ 168 (290)
..|+.|..+|... +.+ ..|..|....... .+.--|.. .|..|-.+. .+|..|+++|..
T Consensus 4 ~~C~~C~~~I~~~~~~~a~~~~~H~~CF~C~~C~~~L~~~~f~~~~g~~-yC~~cy~~~~~~~C~~C~~~I~~ 75 (126)
T 2xqn_T 4 PRCAGCDELIFSNEYTQAENQNWHLKHFCCFDCDSILAGEIYVMVNDKP-VCKPCYVKNHAVVCQGCHNAIDP 75 (126)
T ss_dssp CBBTTTSSBCCSSCEEEETTEEECGGGSBCTTTCCBCTTSEEEEETTEE-EEHHHHHHHSCCBCTTTCSBCCT
T ss_pred CCCccCCCEeCCceEEeeCCCCccCCCCCcCCCCCCCCcCEEEeECCEE-echHHhCcCcCccCcccCCcCCc
Confidence 4677788877642 221 2555555554443 33445655 899999764 699999999874
No 273
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=36.32 E-value=21 Score=24.44 Aligned_cols=22 Identities=27% Similarity=0.668 Sum_probs=16.5
Q ss_pred ccccchhhhh--ccCCCCCCcchh
Q psy7970 100 ACCSVCAPRV--KKCLICREPVEK 121 (290)
Q Consensus 100 ~~C~~Ca~~~--~~Cp~Cr~~i~~ 121 (290)
..|..|..++ .+|+.|..+|..
T Consensus 4 ~yC~~cy~~~~~~~C~~C~~~I~~ 27 (77)
T 2egq_A 4 GSSGDCYKNFVAKKCAGCKNPITG 27 (77)
T ss_dssp SCCTTCCCSCCCCCCSSSCCCCCC
T ss_pred eEchhHhchhhCccCcccCCcccC
Confidence 3577777664 689999999884
No 274
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=36.19 E-value=14 Score=26.91 Aligned_cols=28 Identities=18% Similarity=0.506 Sum_probs=21.2
Q ss_pred cccccccc-CCceEE--eCCCCeecchhhHhc
Q psy7970 127 ECMVCSLK-KASVLF--KPCYHMVACESCASL 155 (290)
Q Consensus 127 ~C~~C~~~-~~~~~~--~PCgH~~~C~~Ca~~ 155 (290)
.|.+|.+. ...++. ++|+|. +|..|...
T Consensus 5 ~C~~C~~~~~~~av~~C~~C~~~-~C~~Cl~~ 35 (101)
T 2jun_A 5 LCQFCDQDPAQDAVKTCVTCEVS-YCDECLKA 35 (101)
T ss_dssp BCTTCCSSSCCBCCEEETTTTEE-ECHHHHHH
T ss_pred CCcCCCCCCCCCceEECCcCChH-HhHHHCHH
Confidence 58888853 344444 899999 99999875
No 275
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=30.92 E-value=23 Score=25.40 Aligned_cols=30 Identities=20% Similarity=0.456 Sum_probs=23.1
Q ss_pred CCCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 243 EQTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
+...|.+|...|.-... .||+.||..|...
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred CCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 55789999998764322 3999999999874
No 276
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=29.97 E-value=24 Score=25.19 Aligned_cols=31 Identities=29% Similarity=0.590 Sum_probs=23.3
Q ss_pred cCCCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 242 KEQTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 242 ~e~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
++...|.+|...|.-... .||..||..|...
T Consensus 17 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 17 DEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred ccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 355789999998763322 3999999999874
No 277
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=29.42 E-value=16 Score=26.00 Aligned_cols=21 Identities=29% Similarity=0.717 Sum_probs=16.9
Q ss_pred ccCCccchHHHhcCCCCCCCcc
Q psy7970 260 LCGHGTCQMCGDRMSECPICRK 281 (290)
Q Consensus 260 ~CGH~fC~~C~~~~~~CP~CR~ 281 (290)
.||+.||..|...|.. -.|..
T Consensus 55 ~C~~~FC~~C~~~wH~-~~C~~ 75 (80)
T 2jmo_A 55 GCGFAFCRECKEAYHE-GECSA 75 (80)
T ss_dssp CCSCCEETTTTEECCS-SCSSS
T ss_pred CCCCeeccccCccccC-Ccccc
Confidence 3799999999998866 66654
No 278
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.16 E-value=52 Score=22.68 Aligned_cols=23 Identities=17% Similarity=0.465 Sum_probs=17.8
Q ss_pred cccccchhhhh--ccCCCCCCcchh
Q psy7970 99 VACCSVCAPRV--KKCLICREPVEK 121 (290)
Q Consensus 99 ~~~C~~Ca~~~--~~Cp~Cr~~i~~ 121 (290)
...|..|..++ .+|..|..+|..
T Consensus 3 ~~yC~~dy~~~~~~~C~~C~~~I~~ 27 (81)
T 1v6g_A 3 SGSSGLDYQRLYGTRCFSCDQFIEG 27 (81)
T ss_dssp CCCCCSCGGGSCCCBCTTTCCBCCS
T ss_pred CCcchHHHHhHhCCcCccccCEecc
Confidence 34678888776 589999998874
No 279
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=27.42 E-value=28 Score=27.07 Aligned_cols=29 Identities=21% Similarity=0.528 Sum_probs=22.0
Q ss_pred CCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 244 QTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 244 ~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
...|.+|...|.-... .||+.||..|...
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 4579999998763322 3999999999764
No 280
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=26.94 E-value=12 Score=22.62 Aligned_cols=15 Identities=33% Similarity=0.848 Sum_probs=11.4
Q ss_pred CCCcccccccccccc
Q psy7970 243 EQTMCPVCLDRLKNM 257 (290)
Q Consensus 243 e~~~C~IC~~~~~~~ 257 (290)
|-+.||+|+..+.++
T Consensus 4 EGFiCP~C~~~l~s~ 18 (34)
T 3mjh_B 4 EGFICPQCMKSLGSA 18 (34)
T ss_dssp EEEECTTTCCEESSH
T ss_pred cccCCcHHHHHcCCH
Confidence 347888888887776
No 281
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=25.93 E-value=35 Score=23.67 Aligned_cols=28 Identities=21% Similarity=0.490 Sum_probs=21.1
Q ss_pred CCcccccccccccccc-----ccCCccchHHHh
Q psy7970 244 QTMCPVCLDRLKNMIF-----LCGHGTCQMCGD 271 (290)
Q Consensus 244 ~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~ 271 (290)
+..|.+|...|.-... .||..||..|..
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 3579999987763322 399999999976
No 282
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=25.18 E-value=48 Score=27.13 Aligned_cols=56 Identities=16% Similarity=0.240 Sum_probs=34.3
Q ss_pred cCCCCCCcchh--hccc---------cccccccccCCceEEeCCCCeecchhhHhcC--CCCCCCCccc
Q psy7970 111 KCLICREPVEK--RIKI---------EECMVCSLKKASVLFKPCYHMVACESCASLM--KKCVQCRTQI 166 (290)
Q Consensus 111 ~Cp~Cr~~i~~--~~~i---------~~C~~C~~~~~~~~~~PCgH~~~C~~Ca~~~--~~Cp~Cr~~i 166 (290)
.|..|..+|.. .+.. ..|..|........|.+=.-...|..|..+. .+|..|.+.+
T Consensus 117 ~C~~C~~~I~~~~~v~a~~~~~H~~CF~C~~C~~~L~~~~~~~~~g~~yC~~cy~~~f~~kc~~C~~~~ 185 (192)
T 1b8t_A 117 GCPRCGQAVYAAEKVIGAGKSWHKSCFRCAKCGKSLESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGA 185 (192)
T ss_dssp ECTTTSCEECSSSCEEETTEEECTTTCBCTTTCCBCCSSSEEEETTEEEEHHHHHHHTCCCCCCCCCCC
T ss_pred cCCCCCCEecCcEEEecCCCccchhcCCccccCCCCCCCcccccCCEEeCHHHHHHhcCCcCCCCCCcc
Confidence 48899998863 2321 2455555544332233333344899999764 6899888774
No 283
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.87 E-value=29 Score=24.85 Aligned_cols=30 Identities=20% Similarity=0.454 Sum_probs=22.4
Q ss_pred CCCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 243 EQTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
+...|.+|...|.-... .||..||..|...
T Consensus 13 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 47 (84)
T 1x4u_A 13 NFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCCSF 47 (84)
T ss_dssp CCSSCSSSCCCCCSSSCCEECSSSCCEECTTTSCE
T ss_pred CCCcCcCcCCccccchhhhhhcCCCcEEChhhcCC
Confidence 45789999998753322 3999999999763
No 284
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=23.12 E-value=30 Score=25.14 Aligned_cols=30 Identities=20% Similarity=0.413 Sum_probs=22.5
Q ss_pred CCCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 243 EQTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
+...|.+|...|.-... .||..||..|...
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 45689999987764322 3999999999764
No 285
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=23.04 E-value=39 Score=24.55 Aligned_cols=30 Identities=27% Similarity=0.573 Sum_probs=22.4
Q ss_pred CCCcccccccccccccc-----ccCCccchHHHhc
Q psy7970 243 EQTMCPVCLDRLKNMIF-----LCGHGTCQMCGDR 272 (290)
Q Consensus 243 e~~~C~IC~~~~~~~v~-----~CGH~fC~~C~~~ 272 (290)
+...|.+|...|.-... .||+.||..|...
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~ 53 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNR 53 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCC
Confidence 45789999987763321 3999999999874
No 286
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.51 E-value=61 Score=22.12 Aligned_cols=23 Identities=13% Similarity=0.457 Sum_probs=16.6
Q ss_pred ccccchhhhh--ccCCCCCCcchhh
Q psy7970 100 ACCSVCAPRV--KKCLICREPVEKR 122 (290)
Q Consensus 100 ~~C~~Ca~~~--~~Cp~Cr~~i~~~ 122 (290)
..|..|..++ .+|..|..+|...
T Consensus 4 ~yC~~cy~~~~~~~C~~C~~~I~~~ 28 (80)
T 2cuq_A 4 GSSGPCYENKFAPRCARCSKTLTQG 28 (80)
T ss_dssp CSCCCCCCCCSSCCCTTTCCCCCSC
T ss_pred EEcHHHHccccCCcCCCCCCEecCc
Confidence 4577777654 6888899888653
No 287
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=22.30 E-value=45 Score=25.26 Aligned_cols=58 Identities=19% Similarity=0.410 Sum_probs=37.2
Q ss_pred ccCCCCCCcchhhc--cc---------cccccccccCC---ceEEeCCCCeecchhhHhcC--C--CCCCCCccccc
Q psy7970 110 KKCLICREPVEKRI--KI---------EECMVCSLKKA---SVLFKPCYHMVACESCASLM--K--KCVQCRTQIDH 168 (290)
Q Consensus 110 ~~Cp~Cr~~i~~~~--~i---------~~C~~C~~~~~---~~~~~PCgH~~~C~~Ca~~~--~--~Cp~Cr~~i~~ 168 (290)
..|..|.++|.... .+ ..|..|..... ...+.--|.. .|..|-.+. . +|..|+++|..
T Consensus 3 ~~C~~C~~~I~~~~~~~a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~-yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 3 LTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRK-LCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp CBBTTTCCBCCSSEEEEETTEEEETTTCBCTTTCCBCSSTTCCEEEETTEE-ECHHHHHHHHCCCEECTTTCCEECT
T ss_pred ccCcCCCCEeCCcEEEEECCCcccHHHcccCcCCCccccCCCeEEEECCEE-eecCchhhhCCCccChhhcCCccCc
Confidence 46777888887652 21 24445554442 2345556665 999998754 3 89999999864
No 288
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.26 E-value=65 Score=22.10 Aligned_cols=21 Identities=24% Similarity=0.523 Sum_probs=16.1
Q ss_pred ccccchhhhh--ccCCCCCCcch
Q psy7970 100 ACCSVCAPRV--KKCLICREPVE 120 (290)
Q Consensus 100 ~~C~~Ca~~~--~~Cp~Cr~~i~ 120 (290)
..|..|..+. ..|..|..+|.
T Consensus 4 ~yC~~cy~~~~~~~C~~C~~~I~ 26 (82)
T 1x63_A 4 GSSGKCTTREDSPKCKGCFKAIV 26 (82)
T ss_dssp CCCCCCCSCCCSCBCSSSCCBCC
T ss_pred cCchhHHccccCCcCccCCcccc
Confidence 4577777665 58999999887
Done!