BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7973
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O76206|RIFK_DROME Putative riboflavin kinase OS=Drosophila melanogaster GN=anon-84Ea
PE=2 SV=1
Length = 153
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/111 (63%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
Query: 20 KYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKM 79
+ P F G IV+GFGRGSKELGIPTAN E VKSLPES G YYGW+ + +GP V+KM
Sbjct: 4 QLPLFAGGEIVRGFGRGSKELGIPTANFPLEVVKSLPESLPTGAYYGWANVDNGP-VHKM 62
Query: 80 VMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
V+SIGWNPFY NK+KS+E H++H+F DLY TL IC++GY+RPE F+SL
Sbjct: 63 VLSIGWNPFYNNKEKSVETHMLHDFNCDLYGQTLKICIVGYLRPERSFDSL 113
>sp|Q969G6|RIFK_HUMAN Riboflavin kinase OS=Homo sapiens GN=RFK PE=1 SV=2
Length = 155
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
PYF +G +V+GFGRGSK+LGIPTAN ++ V +LP G+YYGW+ + G V+KMV+
Sbjct: 5 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSG-DVHKMVV 63
Query: 82 SIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
SIGWNP+YKN KKSME HI+H F D Y L++ ++GY+RPE +F+SL
Sbjct: 64 SIGWNPYYKNTKKSMETHIMHTFKEDFYGEILNVAIVGYLRPEKNFDSL 112
>sp|Q8CFV9|RIFK_MOUSE Riboflavin kinase OS=Mus musculus GN=Rfk PE=2 SV=2
Length = 155
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
P+F +G +V+GFGRGSK+LGIPTAN ++ V +LP G+YYGW+ + G V+KMV+
Sbjct: 5 PFFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADVSTGIYYGWASVGSG-DVHKMVV 63
Query: 82 SIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
SIGWNP+YKN KKSME HIIH F D Y L++ ++GY+RPE +F+SL
Sbjct: 64 SIGWNPYYKNVKKSMETHIIHTFKEDFYGEILNVAIVGYLRPEKNFDSL 112
>sp|O74866|RIFK_SCHPO Riboflavin kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=fmn1 PE=1 SV=1
Length = 163
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%), Gaps = 2/116 (1%)
Query: 15 HQAKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGP 74
+ + YP +G +V GFGRGSKELGIPTAN+ ++A++ L D GVY+G++ +
Sbjct: 16 EKVQSPYPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRDSGVYFGYAMVQK-- 73
Query: 75 TVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
V+ MVMS+GWNP+YKNK +S EVH+I G D Y+ + + VLGYIRPEL++ L
Sbjct: 74 RVFPMVMSVGWNPYYKNKLRSAEVHLIERQGEDFYEEIMRVIVLGYIRPELNYAGL 129
>sp|A5E1A0|RIFK_LODEL Riboflavin kinase OS=Lodderomyces elongisporus (strain ATCC 11503 /
CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=FMN1
PE=3 SV=1
Length = 182
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 33/146 (22%)
Query: 13 VCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTANM-CDEAVKSLPESFDPGVYYGWSKL- 70
+ + YP T I+ GFGRGS ELGIPTAN+ + + SLP G+YYGW K+
Sbjct: 8 IPEKPTSPYPIHTTAPIISGFGRGSSELGIPTANIPINAQLNSLPT----GIYYGWCKIH 63
Query: 71 ------------SDGP---------------TVYKMVMSIGWNPFYKNKKKSMEVHIIHE 103
DG V+ MVMSIGWNPFY+NK+K+ E+HI+ +
Sbjct: 64 PVSDQNDETRTRPDGQLILFNHGNKLQANELVVHPMVMSIGWNPFYQNKEKAAEIHIMSK 123
Query: 104 FGRDLYDLTLSICVLGYIRPELDFNS 129
F RD Y L VLGY+RPELD+ +
Sbjct: 124 FERDFYGAELEFIVLGYVRPELDYTT 149
>sp|A4QQ05|RIFK_MAGO7 Riboflavin kinase OS=Magnaporthe oryzae (strain 70-15 / ATCC
MYA-4617 / FGSC 8958) GN=FMN1 PE=3 SV=3
Length = 200
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 15/125 (12%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANM-CDEAVKSLPESFDPGVYYGWSKLS-------- 71
+PY +G ++ GFGRGSKELGIPTAN+ D + S GVYYGW+ L
Sbjct: 19 FPYKMEGKVISGFGRGSKELGIPTANLPVDATISPWISSISSGVYYGWASLQLPPSHPES 78
Query: 72 ------DGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPEL 125
V+ MVMSIG+NPFY N ++S EVHI+H+F D YD + + +LG+IR E
Sbjct: 79 PSSSSCSPYVVFPMVMSIGYNPFYNNTERSAEVHILHKFTADFYDAPMRLLILGFIRDEK 138
Query: 126 DFNSL 130
+++SL
Sbjct: 139 NYDSL 143
>sp|A5DAH9|RIFK_PICGU Riboflavin kinase OS=Meyerozyma guilliermondii (strain ATCC 6260 /
CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=FMN1 PE=3 SV=2
Length = 180
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 72/136 (52%), Gaps = 30/136 (22%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL---------- 70
YP G I GFGRGS ELGIPTAN+ V S + G+YYGW +L
Sbjct: 17 YPIIGAGTIESGFGRGSAELGIPTANI---PVTSELNKLETGIYYGWCRLVPRNQECAAK 73
Query: 71 --SDGPTVY---------------KMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTL 113
SDG VY M MSIGWNPFY N+ K+ EVHIIH+F + Y L
Sbjct: 74 QRSDGKKVYFNNGTKLADDELETFPMAMSIGWNPFYNNETKTAEVHIIHKFRENFYGADL 133
Query: 114 SICVLGYIRPELDFNS 129
V+G+IRPEL++ +
Sbjct: 134 RYAVMGHIRPELNYTT 149
>sp|P0C5D9|RIFK_CHAGB Riboflavin kinase OS=Chaetomium globosum (strain ATCC 6205 / CBS
148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=FMN1 PE=3
SV=1
Length = 235
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 78/152 (51%), Gaps = 42/152 (27%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANM-CDEAVKSLPESFDPGVYYGWSKLS-------- 71
YP+ G+++ GFGRGSKELGIPTAN+ D+A S GVY+GW+ L+
Sbjct: 22 YPFRMSGLVISGFGRGSKELGIPTANLPVDDAQTPWISSIPSGVYFGWASLNLPASHPDS 81
Query: 72 ---------------------------------DGPTVYKMVMSIGWNPFYKNKKKSMEV 98
+G VY MVMSIG+NPFYKN +S EV
Sbjct: 82 LTSSAAAAAAAAAAAAAPGEDGGGAGEQRQRGGNGFAVYPMVMSIGYNPFYKNTVRSAEV 141
Query: 99 HIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
H++H FG D Y + + + + G+IR E D++ L
Sbjct: 142 HVLHRFGADFYGVEMRLLIAGFIREEKDYSGL 173
>sp|Q6CG11|RIFK_YARLI Riboflavin kinase OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=FMN1 PE=3 SV=1
Length = 192
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 78/144 (54%), Gaps = 31/144 (21%)
Query: 17 AKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL--SDGP 74
A YP I+ G+GRGS +LGIPTAN+ + V L ++ D G+YYG ++ +D P
Sbjct: 20 ASTAYPIKFASSIIPGYGRGSADLGIPTANIPIDDVPVL-DALDTGIYYGLVQILKTDKP 78
Query: 75 T----------------------------VYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR 106
+ V MVMS+GWNPFYKN +KS E+HIIH+F
Sbjct: 79 SEKKTSEFQKDRVVDFQYTNKLNDQEINAVLPMVMSVGWNPFYKNDQKSAEIHIIHKFAH 138
Query: 107 DLYDLTLSICVLGYIRPELDFNSL 130
Y ++ + VLGY+RPE +F SL
Sbjct: 139 TFYGASIKVMVLGYLRPEKNFTSL 162
>sp|Q6CT57|RIFK_KLULA Riboflavin kinase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS
2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=FMN1 PE=3 SV=1
Length = 185
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 28/129 (21%)
Query: 29 IVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLS-------------DGP- 74
++ GFGRGS ELGIPTAN+ + + + E D GVY+GW K+ DG
Sbjct: 26 VIAGFGRGSAELGIPTANVPIDDLPKIVEQLDTGVYFGWCKVRMAKDRDTKVEQRPDGRE 85
Query: 75 --------------TVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGY 120
V +V+S+GWNPFY+NK K++E+HIIH+F + Y + LGY
Sbjct: 86 VQYNNGTLLNDEDLAVLPVVLSVGWNPFYQNKNKTVELHIIHKFSDNFYGAQIKFNFLGY 145
Query: 121 IRPELDFNS 129
IRPELD+ +
Sbjct: 146 IRPELDYTT 154
>sp|Q75DY2|RIFK_ASHGO Riboflavin kinase OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=FMN1 PE=3 SV=2
Length = 186
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 77/138 (55%), Gaps = 29/138 (21%)
Query: 21 YPYFTKGI-IVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL--------- 70
+P T+ + IV GFGRGS ELGIPTAN+ E + S GVY+GW++L
Sbjct: 18 FPILTEYVDIVAGFGRGSAELGIPTANVPIEQLPSEVNEMATGVYFGWARLRPNMDQEAQ 77
Query: 71 ----SDGPTV---------------YKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDL 111
+DG V + +V+S+GWNPFY N KK++E+HI+++F D Y
Sbjct: 78 VHHRNDGSEVIYNFGSKLSETERGVFPIVLSVGWNPFYNNSKKTVELHILNDFEEDFYGA 137
Query: 112 TLSICVLGYIRPELDFNS 129
+ LGYIRPEL++ +
Sbjct: 138 KIKFSFLGYIRPELNYTT 155
>sp|A3M0C9|RIFK_PICST Riboflavin kinase OS=Scheffersomyces stipitis (strain ATCC 58785 /
CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=FMN1 PE=3 SV=2
Length = 178
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 70/136 (51%), Gaps = 30/136 (22%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL---------- 70
YP ++V GFGRGS ELGIPTAN+ + + G+YYGW +L
Sbjct: 16 YPIVQDSVVVSGFGRGSSELGIPTANI---PINDDLNQLETGIYYGWCQLKPCTLPDECK 72
Query: 71 -----------------SDGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTL 113
+D V MVMSIGWNPFY K+K+ EVHI+H+F Y +
Sbjct: 73 TRTNGREVIYNHGKNLRNDDLKVLPMVMSIGWNPFYHLKEKAAEVHIMHKFDDFFYGAQI 132
Query: 114 SICVLGYIRPELDFNS 129
VLGYIRPELD+ +
Sbjct: 133 KFNVLGYIRPELDYTT 148
>sp|A2QFH1|RIFK_ASPNC Riboflavin kinase OS=Aspergillus niger (strain CBS 513.88 / FGSC
A1513) GN=fmn1 PE=3 SV=1
Length = 214
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 25/136 (18%)
Query: 18 KDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGW-----SKLSD 72
+ YP G ++KGFGRGSKELGIPTAN+ + + PE GVYYG ++ S
Sbjct: 18 ESPYPIRMSGPVIKGFGRGSKELGIPTANIPADELSQHPE-LSVGVYYGVVALDPARFST 76
Query: 73 GPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR-------------------DLYDLTL 113
G TV V+SIG+NPFYKN+ KS+E+HI+ D Y L
Sbjct: 77 GETVLPAVLSIGYNPFYKNESKSIEIHIMPPLSAPSPTATTSTDGQVTFHKLPDFYGTPL 136
Query: 114 SICVLGYIRPELDFNS 129
++ +LGYIRPE D+ S
Sbjct: 137 NLLILGYIRPEYDYIS 152
>sp|Q6M923|RIFK_NEUCR Riboflavin kinase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fmn-1
PE=3 SV=1
Length = 210
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 32/142 (22%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWS------------ 68
+P+ +G ++ GFGRGSKELGIPTAN+ + + ++ D G+Y+GW+
Sbjct: 23 FPFRMEGEVISGFGRGSKELGIPTANLPVDDENAWIKNIDSGIYFGWASLKLPASHPNSV 82
Query: 69 ----------------KLSDGPT----VYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDL 108
KL D T +Y MVMSIG+NPFYKN +S EVH++ EF D
Sbjct: 83 LYQKPPTSEPVMMDPEKLVDQETGQWQIYPMVMSIGYNPFYKNTVRSAEVHVLGEFAADF 142
Query: 109 YDLTLSICVLGYIRPELDFNSL 130
Y + + + + G+IR E D++ L
Sbjct: 143 YGVGMRLLITGFIRNEKDYSGL 164
>sp|Q2UMM4|RIFK_ASPOR Riboflavin kinase OS=Aspergillus oryzae (strain ATCC 42149 / RIB
40) GN=fmn1 PE=3 SV=1
Length = 198
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 24/133 (18%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGW-----SKLSDGPT 75
+P G ++KGFGRGSKELGIPTAN+ + + P+ GVYYG S+ + T
Sbjct: 21 FPIKLSGPVIKGFGRGSKELGIPTANIPPDGLSDYPD-LQVGVYYGVVALDPSRFTSETT 79
Query: 76 VYKMVMSIGWNPFYKNKKKSMEVHIIH-----------EFGR-------DLYDLTLSICV 117
+ V+SIG+NPFYKN +S+E+HI+ E G+ D Y L++ +
Sbjct: 80 ILPAVLSIGYNPFYKNTTRSVEIHIMPPLSSPSPTANGEAGQVKFNKLPDFYGTKLNLLI 139
Query: 118 LGYIRPELDFNSL 130
LGYIRPE D+ SL
Sbjct: 140 LGYIRPEYDYVSL 152
>sp|Q4WHD2|RIFK_ASPFU Riboflavin kinase OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=fmn1 PE=3 SV=1
Length = 214
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 71/147 (48%), Gaps = 38/147 (25%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDG------- 73
YP G ++KGFGRGSKELGIPTAN+ E ++ P+ GVYYG L
Sbjct: 21 YPVRLSGPVIKGFGRGSKELGIPTANIPAEGLEEYPD-LQVGVYYGVVALDPAKFQYQEG 79
Query: 74 -------------PTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR-------------- 106
V V+SIG+NPFYKNK KS+E+HI+
Sbjct: 80 QGSTSTSSTGGAEAAVLPAVLSIGYNPFYKNKTKSIEIHIMPPLSSPSPTADGAGEVKFH 139
Query: 107 ---DLYDLTLSICVLGYIRPELDFNSL 130
D Y L + +LGYIRPE D+ SL
Sbjct: 140 KLPDFYGTQLKLLILGYIRPEYDYVSL 166
>sp|A1C603|RIFK_ASPCL Riboflavin kinase OS=Aspergillus clavatus (strain ATCC 1007 / CBS
513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=fmn1 PE=3 SV=1
Length = 214
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 70/149 (46%), Gaps = 40/149 (26%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDG------- 73
YP G ++KGFGRGSKELGIPTAN+ E + P+ GVYYG L
Sbjct: 21 YPVRLSGPVIKGFGRGSKELGIPTANIPAEELAEHPD-LQVGVYYGVVALDPAKFQYHGD 79
Query: 74 ---------PTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR------------------ 106
+ V+SIG+NPFYKNK +S+E+HI+
Sbjct: 80 ASRKGEDSQAAILPAVLSIGYNPFYKNKTRSIEIHIMPPLSSPSPTAEVTTQGQGHGQVK 139
Query: 107 -----DLYDLTLSICVLGYIRPELDFNSL 130
D Y L + +LGYIRPE D+ SL
Sbjct: 140 FHKLPDFYGTQLKLLILGYIRPEFDYVSL 168
>sp|Q0CHR1|RIFK_ASPTN Riboflavin kinase OS=Aspergillus terreus (strain NIH 2624 / FGSC
A1156) GN=fmn1 PE=3 SV=1
Length = 205
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 71/138 (51%), Gaps = 27/138 (19%)
Query: 18 KDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL------- 70
+ +P G ++KGFGRGSKELGIPTAN+ + + P+ GVYYG L
Sbjct: 18 EPPFPIRLAGPVIKGFGRGSKELGIPTANIPADGLAEYPD-LQVGVYYGVVALNPAQSEV 76
Query: 71 -SDGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR------------------DLYDL 111
S + V+SIG+NPFYKN +S+E+HI+ D Y
Sbjct: 77 PSTSAQILPAVLSIGYNPFYKNTTRSIEIHIMPPLTAPSPTATGTPGHVTFHKLPDFYGT 136
Query: 112 TLSICVLGYIRPELDFNS 129
+L + +LGYIRPE D+ S
Sbjct: 137 SLKLLILGYIRPEYDYVS 154
>sp|Q5AW61|RIFK_EMENI Riboflavin kinase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=fmn1 PE=3 SV=1
Length = 210
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 35/145 (24%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANM-CDEAVKSLPESFDPGVYYGWSKLS-------- 71
+P G ++KGFGRGSKELGIPTAN+ D + LP+ GVYYG L
Sbjct: 21 FPIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPAPS 80
Query: 72 -------DGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFG------------------- 105
D + V+SIG+NP+YKNK +S+E+HI+
Sbjct: 81 SSDSTSGDAAPILPAVLSIGYNPYYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKFHKL 140
Query: 106 RDLYDLTLSICVLGYIRPELDFNSL 130
D Y L++ +LGYIRPE D+ S+
Sbjct: 141 PDFYGTKLNLLMLGYIRPEYDYVSM 165
>sp|A1DG00|RIFK_NEOFI Riboflavin kinase OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / FGSC A1164 / NRRL 181) GN=fmn1 PE=3 SV=1
Length = 218
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 71/151 (47%), Gaps = 42/151 (27%)
Query: 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYK-- 78
YP G ++KGFGRGSKELGIPTAN+ E + P+ GVYYG L Y+
Sbjct: 21 YPVRLSGPVIKGFGRGSKELGIPTANIPAEGLAEYPD-LQVGVYYGVVALDPAKFQYQED 79
Query: 79 ----------------------MVMSIGWNPFYKNKKKSMEVHIIHEFGR---------- 106
V+SIG+NPFYKNK KS+E+HI+
Sbjct: 80 QGEGSTSSTGGAGAGAGAAILPAVLSIGYNPFYKNKTKSIEIHIMPPLSSPSPTAEGAGE 139
Query: 107 -------DLYDLTLSICVLGYIRPELDFNSL 130
D Y L + +LGYIRPE D+ SL
Sbjct: 140 VKFHKLPDFYGTQLKLLILGYIRPEYDYVSL 170
>sp|Q6FM49|RIFK_CANGA Riboflavin kinase OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=FMN1 PE=3 SV=2
Length = 189
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 30/147 (20%)
Query: 13 VCHQAKDKYPYFTKGI-IVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLS 71
+ Q YP TK IV GFGRGS ELGIPTAN+ + + + + GVY+G++K++
Sbjct: 10 IPEQPGAPYPIVTKCCDIVCGFGRGSSELGIPTANVPVDQLPEVVNKLELGVYFGYAKVT 69
Query: 72 ------------DGPTV-----------------YKMVMSIGWNPFYKNKKKSMEVHIIH 102
DG V +V+S+G NPFY N K++E+HI+H
Sbjct: 70 PVAHDLEQVEREDGRVVSYNYGSHLEEDNGDLEVLPVVLSVGKNPFYHNDFKTVEIHILH 129
Query: 103 EFGRDLYDLTLSICVLGYIRPELDFNS 129
+F Y + +LGY+RPELD+ S
Sbjct: 130 DFKSTFYGAKIKFNILGYVRPELDYTS 156
>sp|Q03778|RIFK_YEAST Riboflavin kinase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=FMN1 PE=1 SV=1
Length = 218
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 36/134 (26%)
Query: 29 IVKGFGRGSKELGIPTANMCDEAVKSLPE---SFDPGVYYGW------------------ 67
IV GFGRGS ELGIPTAN+ + LP+ D GVY+G+
Sbjct: 57 IVCGFGRGSAELGIPTANV---PINQLPKGINDLDLGVYFGFAHIKTVDGQELSVETRRD 113
Query: 68 ------------SKLSDGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSI 115
S+ +D +V MV+S+G NPFY N K+ME+HIIH+F D Y +
Sbjct: 114 GRTVVYNYGQYLSEANDDLSVLPMVLSVGKNPFYGNDFKTMELHIIHDFKNDFYGARVKF 173
Query: 116 CVLGYIRPELDFNS 129
+LG+IRPEL++ +
Sbjct: 174 NILGHIRPELNYTT 187
>sp|P73651|RIBF_SYNY3 Riboflavin biosynthesis protein RibF OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=ribF PE=3 SV=1
Length = 284
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
PY +G +V+G G K LG PTAN+C A K P+ GVY GW L+ V+
Sbjct: 156 PYALRGTVVQGQQLGRK-LGFPTANLCLPADKLWPKY---GVYAGWVNLNALDVPIPAVI 211
Query: 82 SIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
++G P ++ S EVH++ G DLY L + + Y+RPE F L
Sbjct: 212 NLGDRPTVNGQEPSAEVHLLQWSG-DLYGQGLEVALTHYLRPETKFAGL 259
>sp|Q59263|RIBF_CORAM Riboflavin biosynthesis protein RibF OS=Corynebacterium
ammoniagenes GN=ribF PE=1 SV=1
Length = 338
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 14/118 (11%)
Query: 23 YFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKL--SDGP------ 74
++ G +V+G GRG KELG PTAN +LP GVY GW + ++ P
Sbjct: 187 FYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPAD---GVYAGWLTILPTEAPVSGNME 243
Query: 75 --TVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
Y +S+G NP + ++++S+E ++ + DLY + + + ++R F+S+
Sbjct: 244 PEVAYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSV 300
>sp|P54575|RIBC_BACSU Riboflavin biosynthesis protein RibC OS=Bacillus subtilis (strain
168) GN=ribC PE=3 SV=2
Length = 316
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
PYF KGI++ G RG + +G PTAN+ +P + GVY ++++ VY V
Sbjct: 189 PYFIKGIVIHGDKRG-RTIGFPTANVGLNNSYIVPPT---GVYAVKAEVNG--EVYNGVC 242
Query: 82 SIGWNP-FYKNK--KKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
+IG+ P FY+ + + S+EV++ +F +++Y + I IR E FN +
Sbjct: 243 NIGYKPTFYEKRPEQPSIEVNLF-DFNQEVYGAAIKIEWYKRIRSERKFNGI 293
>sp|Q7NBZ0|MNMA_MYCGA Trifunctional protein RibF/MnmA OS=Mycoplasma gallisepticum (strain
R(low / passage 15 / clone 2)) GN=ribF/mnmA PE=3 SV=1
Length = 657
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANM-CDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMV 80
P++ KG ++K RG + +G TAN+ D + L E Y + D T Y+ +
Sbjct: 162 PFYLKGTVIKNAQRG-RTIGFVTANIILDNQLIELTEG-----SYVCKVIVDNKT-YQGI 214
Query: 81 MSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLG 131
IG + K++ E HI +F +D+Y + + + +IRP + FNS+
Sbjct: 215 CFIGKPKTFDEKQRQCEAHIF-DFDQDIYGKKIKVELYQFIRPTVKFNSIN 264
>sp|P94465|RIBR_BACSU Regulatory protein RibR OS=Bacillus subtilis (strain 168) GN=ribR
PE=4 SV=1
Length = 230
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 27 GIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWN 86
G +VKG G K LG PTAN+ D + L GVY + ++ + VM+IG
Sbjct: 6 GTVVKGKQLGRK-LGFPTANV-DAKIHGLRN----GVYGVLATVNH--QFHLGVMNIGVK 57
Query: 87 PFY-KNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
P N +K++E+ + +F RD+Y + +L IR E F+SL
Sbjct: 58 PTVGSNLEKTLEIFLF-DFHRDIYGEKIECSILFKIREERRFDSL 101
>sp|P22990|RIBF_PSEFL Riboflavin biosynthesis protein RibF OS=Pseudomonas fluorescens
GN=ribF PE=3 SV=1
Length = 311
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
P+ G ++ G + +++LG PTAN+ + + +P + GVY S DG + + V
Sbjct: 186 PFRIAGRVLHG-QKLARQLGTPTANVQLKR-RRVPLT---GVYL-VSVDIDGQS-WPGVA 238
Query: 82 SIGWNPFYKNKKKS-MEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
+IG P K+ +EVH++ +F DLYD L++ +R E F SL
Sbjct: 239 NIGVRPTVAGDGKAHLEVHLL-DFAGDLYDRRLTVVFHQKLREEQRFASL 287
>sp|P75587|RIBF_MYCPN Putative riboflavin biosynthesis protein RibF OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=ribF PE=1 SV=1
Length = 269
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 22 PYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVM 81
PYF +G++++G + ++ LG PTAN+ +K G Y ++ T Y V
Sbjct: 149 PYFREGVVIRG-NQQARFLGWPTANI---TLKPYMVPLRCGSYV--ITVTYHQTNYPGVG 202
Query: 82 SIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSL 130
I YKN + E H+I F DLY L +IRP+ F+ +
Sbjct: 203 FIS----YKNDQLVCETHLI-GFSGDLYGKQLRFTFNQFIRPQQKFSGV 246
>sp|B9DPG4|XERC_STACT Tyrosine recombinase XerC OS=Staphylococcus carnosus (strain TM300)
GN=xerC PE=3 SV=1
Length = 296
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 30 VKGFGRGSKELGIPTANMCDEAVKSLPESFDP 61
VK G+G+KE IP NMC E+++ E F P
Sbjct: 164 VKVLGKGNKERFIPFGNMCRESIERYLELFPP 195
>sp|A6GWN3|MUTS_FLAPJ DNA mismatch repair protein MutS OS=Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511) GN=mutS PE=3 SV=1
Length = 866
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 12 GVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYG 66
+C Q +D P TK I+ RG EL P +M DE + S +F +Y+G
Sbjct: 89 AICDQLED--PKMTKTIV----KRGVTELVTPGVSMNDEVLNSKTNNFLASIYFG 137
>sp|Q9U5P1|FABP_LEPDS Fatty acid-binding protein OS=Lepidoglyphus destructor PE=1 SV=1
Length = 131
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 71 SDGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRP 123
+DG V +++ G N F + + EV ++ EF D ++T S+ + +RP
Sbjct: 75 ADGKRVKTVIVKDGDNKFVQTQYGDKEVKVVREFKGDEVEVTASVDGVTSVRP 127
>sp|Q6BJJ8|LONP2_DEBHA Lon protease homolog 2, peroxisomal OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DEHA2G01892g PE=3 SV=2
Length = 1147
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 38 KELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWN 86
K LG+P AN+ E +S ES GV G S SDG + SIG+N
Sbjct: 883 KYLGLPFANLSTELFESPIESAKCGVVNGLSYNSDGSGSVLVFESIGFN 931
>sp|Q2YXL6|XERC_STAAB Tyrosine recombinase XerC OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=xerC PE=3 SV=1
Length = 298
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 8 IKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDP 61
I+ + + + K ++ G+ V FG+GSKE +P C +++++ E F P
Sbjct: 144 IRVSELVNIKKQDIDFYANGVTV--FGKGSKERFVPFGAYCRQSIENYLEHFKP 195
>sp|Q9C5P1|SUVH7_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH7
OS=Arabidopsis thaliana GN=SUVH7 PE=2 SV=1
Length = 693
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 26 KGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFD 60
+G I++ G++ L +P N DE K++PE FD
Sbjct: 400 QGFILEDLSFGAELLRVPLVNEVDEDDKTIPEDFD 434
>sp|Q5E635|HIS5_VIBF1 Imidazole glycerol phosphate synthase subunit HisH OS=Vibrio
fischeri (strain ATCC 700601 / ES114) GN=hisH PE=3 SV=1
Length = 204
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 47 MCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGR 106
+CD V+ L P + GW+ + + NP +K+ ++ + +H FG
Sbjct: 106 LCDGEVRKLQTGDLPLPHMGWNTIK----------PVEGNPLFKDIPENSYFYFVHSFGM 155
Query: 107 DLYDLTLSICVLG 119
+ D T++ C G
Sbjct: 156 QVGDYTIASCDYG 168
>sp|Q87QK8|HIS5_VIBPA Imidazole glycerol phosphate synthase subunit HisH OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=hisH PE=3 SV=1
Length = 204
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 11/86 (12%)
Query: 34 GRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKK 93
G+ + EL + +CD VK L P + GW+ +S + NP +K+ +
Sbjct: 94 GQKADEL-VECLGLCDGEVKLLQTGDLPLPHMGWNTVS----------AKAGNPLFKDIE 142
Query: 94 KSMEVHIIHEFGRDLYDLTLSICVLG 119
+ + +H F + D T++ C G
Sbjct: 143 EGEYFYFVHSFAMPVGDYTIAECDYG 168
>sp|A7H5Q5|Y1899_CAMJD UPF0271 protein JJD26997_1899 OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97)
GN=JJD26997_1899 PE=3 SV=1
Length = 255
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 14/72 (19%)
Query: 1 MSQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFD 60
M ++ N+ KQNGVC A YP GFGR + ++ A + A+ L
Sbjct: 46 MDKTLNLAKQNGVCIGAHPSYPDLL------GFGRRNMQISFEEAK--NYALYQL----- 92
Query: 61 PGVYYGWSKLSD 72
G +G++K D
Sbjct: 93 -GALFGFAKAKD 103
>sp|Q9PMC8|Y1541_CAMJE UPF0271 protein Cj1541 OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=Cj1541 PE=3 SV=1
Length = 255
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 1 MSQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTA 45
M ++ N+ KQNGVC A YP GFGR + ++ A
Sbjct: 46 MDETLNLAKQNGVCIGAHPSYPDLL------GFGRRNMQISFEEA 84
>sp|A1W1E0|Y1526_CAMJJ UPF0271 protein CJJ81176_1526 OS=Campylobacter jejuni subsp.
jejuni serotype O:23/36 (strain 81-176)
GN=CJJ81176_1526 PE=3 SV=1
Length = 255
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 1 MSQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTA 45
M ++ N+ KQNGVC A YP GFGR + ++ A
Sbjct: 46 MDETLNLAKQNGVCIGAHPSYPDLL------GFGRRNMQISFEEA 84
>sp|Q5HSP5|Y1712_CAMJR UPF0271 protein CJE1712 OS=Campylobacter jejuni (strain RM1221)
GN=CJE1712 PE=3 SV=1
Length = 255
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 1 MSQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTA 45
M ++ N+ KQNGVC A YP GFGR + ++ A
Sbjct: 46 MDETLNLAKQNGVCIGAHPSYPDLL------GFGRRNMQISFEEA 84
>sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN
PE=1 SV=3
Length = 5488
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 15/83 (18%)
Query: 23 YFTKGIIVKGFGRGSKELGIP-TANMCDEAVKSLPESFDPGVY------------YGWSK 69
+ G K RG E GI T DE K+L S++P +Y GWSK
Sbjct: 4600 FIEGGTNAKYMYRGRAEKGIAQTLRSDDEVQKTLNNSWEPHIYERLLDLWVKGMEIGWSK 4659
Query: 70 LSDGPTVYKMVMSIGWNPFYKNK 92
L DG + +S+ PF K +
Sbjct: 4660 LYDGKQPKR--ISLPTYPFAKER 4680
>sp|Q8D8Q3|HIS5_VIBVU Imidazole glycerol phosphate synthase subunit HisH OS=Vibrio
vulnificus (strain CMCP6) GN=hisH PE=3 SV=1
Length = 204
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 34 GRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKK 93
G+ + EL + +CD VK L P + GW+ +S + NP +K +
Sbjct: 94 GQKADEL-VECLGLCDGEVKLLQTGDLPLPHMGWNTVS----------AKAGNPLFKGIE 142
Query: 94 KSMEVHIIHEFGRDLYDLTLSICVLG 119
+ + +H F + D T++ C G
Sbjct: 143 EGEYFYFVHSFAMPVGDYTIAECEYG 168
>sp|Q7MLS3|HIS51_VIBVY Imidazole glycerol phosphate synthase subunit HisH 1 OS=Vibrio
vulnificus (strain YJ016) GN=hisH1 PE=3 SV=1
Length = 204
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 11/86 (12%)
Query: 34 GRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKK 93
G+ + EL + +CD VK L P + GW+ +S + NP +K +
Sbjct: 94 GQKADEL-VECLGLCDGEVKLLQTGDLPLPHMGWNTVS----------AKAGNPLFKGIE 142
Query: 94 KSMEVHIIHEFGRDLYDLTLSICVLG 119
+ + +H F + D T++ C G
Sbjct: 143 EGEYFYFVHSFAMPVGDYTIAECEYG 168
>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus
GN=Tmtc3 PE=2 SV=2
Length = 920
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 SQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPES 58
SQ+A +K + + YP TKG+I+KG +++ IP A C E + + S
Sbjct: 718 SQTAKELKALPILEELLKYYPDHTKGLILKGDILMNQKKDIPGAKKCFEKILEMDPS 774
>sp|A8FNK1|Y1440_CAMJ8 UPF0271 protein C8J_1440 OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=C8J_1440
PE=3 SV=1
Length = 255
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 1 MSQSANIIKQNGVCHQAKDKYPYFTKGIIVKGFGRGSKELGIPTA 45
M ++ N+ KQNGVC A YP GFGR + ++ A
Sbjct: 46 MDKTLNLAKQNGVCIGAHPSYPDLL------GFGRRNMQISFEEA 84
>sp|Q7MTW1|NRFA_PORGI Cytochrome c-552 OS=Porphyromonas gingivalis (strain ATCC BAA-308 /
W83) GN=nrfA PE=3 SV=1
Length = 498
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 74 PTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFG 105
P V +M+ +IG + FYKNK S+ I++ G
Sbjct: 154 PDVPRMMQAIGVDEFYKNKWSSLGSDIVNPIG 185
>sp|Q54I78|SYVM_DICDI Probable valine--tRNA ligase, mitochondrial OS=Dictyostelium
discoideum GN=valS2 PE=3 SV=2
Length = 1051
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 22/103 (21%)
Query: 51 AVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFY--------------------- 89
+V +L E + V + ++ + +Y+ + W P+
Sbjct: 170 SVFTLDEQRNDAVQTAFIRMFEMGLIYRSTRLVNWCPYLQSVISDIEVDHKVIEKPTMLK 229
Query: 90 -KNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLG 131
K++KKS+EV IH + D L+ ++ RPE F G
Sbjct: 230 LKSRKKSVEVGAIHNIAYMMEDPMLAPLIVSTTRPETIFGDTG 272
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,797,178
Number of Sequences: 539616
Number of extensions: 2203721
Number of successful extensions: 3863
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3793
Number of HSP's gapped (non-prelim): 56
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)