Query psy7973
Match_columns 132
No_of_seqs 118 out of 1012
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 23:34:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3op1_A Macrolide-efflux protei 100.0 1.7E-48 5.9E-53 316.0 11.4 124 2-132 167-292 (308)
2 2x0k_A Riboflavin biosynthesis 100.0 3.5E-47 1.2E-51 311.4 10.2 126 2-132 164-302 (338)
3 1nb0_A Hypothetical protein FL 100.0 9.4E-47 3.2E-51 277.9 9.4 111 21-132 3-113 (147)
4 1mrz_A Riboflavin kinase/FMN a 100.0 1.7E-46 5.8E-51 302.4 11.7 125 2-132 137-265 (293)
5 1n08_A Putative riboflavin kin 100.0 9.6E-45 3.3E-49 271.2 11.6 107 21-132 22-131 (163)
6 3bnw_A Riboflavin kinase, puta 100.0 1.2E-44 4.1E-49 274.4 7.6 108 21-132 16-135 (181)
7 3dwl_G Actin-related protein 2 44.2 7.7 0.00026 28.0 1.1 22 2-23 40-65 (152)
8 1k8k_G P16, ARP2/3 complex 16 35.6 15 0.00052 26.3 1.6 19 2-20 39-57 (151)
9 2oyn_A Hypothetical protein MJ 34.7 12 0.00041 26.8 0.9 31 21-51 5-52 (146)
10 1ej2_A Nicotinamide mononucleo 32.9 14 0.00047 26.3 0.9 12 2-13 132-143 (181)
11 1keq_A F65A/Y131C-MI carbonic 30.7 21 0.00071 27.1 1.7 27 83-110 82-108 (248)
12 1jd0_A Carbonic anhydrase XII; 30.4 21 0.00071 27.4 1.7 27 83-110 101-127 (263)
13 1rj5_A Carbonic anhydrase XIV; 29.9 22 0.00074 27.2 1.7 26 84-110 103-128 (261)
14 3jxg_A Receptor-type tyrosine- 28.3 28 0.00095 26.8 2.1 27 83-110 108-134 (269)
15 2foy_A Carbonic anhydrase 1; l 27.5 25 0.00087 26.8 1.7 26 83-109 103-128 (260)
16 3d0n_A Carbonic anhydrase 13; 26.9 26 0.0009 26.8 1.7 26 83-109 106-131 (264)
17 2qjo_A Bifunctional NMN adenyl 26.5 20 0.00068 27.3 0.9 14 2-15 141-154 (341)
18 2w2j_A Carbonic anhydrase-rela 26.2 27 0.00094 27.2 1.7 25 84-109 127-151 (291)
19 1kqn_A Nmnat, nicotinamide mon 25.7 25 0.00087 27.0 1.4 12 2-13 223-234 (279)
20 3jxf_A Receptor-type tyrosine- 25.4 34 0.0011 26.4 2.1 27 83-110 108-134 (272)
21 3gmi_A UPF0348 protein MJ0951; 25.2 41 0.0014 27.1 2.6 19 2-20 229-247 (357)
22 1nup_A FKSG76; NAD biosynthesi 21.8 34 0.0012 25.7 1.4 12 2-13 202-213 (252)
23 1f9a_A Hypothetical protein MJ 21.8 29 0.00099 24.2 0.9 12 2-13 126-137 (168)
24 1yum_A 'probable nicotinate-nu 21.7 34 0.0012 25.6 1.4 12 2-13 199-210 (242)
No 1
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.7e-48 Score=316.01 Aligned_cols=124 Identities=27% Similarity=0.445 Sum_probs=110.4
Q ss_pred cHHHHHHHHCCChhhhhcc--CCeEEEEEEEccCCCCccccCceeecccCCccccCCCCCCCceEEEEEEEcCCCeEEEE
Q psy7973 2 SQSANIIKQNGVCHQAKDK--YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKM 79 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l--~py~i~G~Vv~G~~~G~~~lGfPTANl~~~~~~~lp~~~~~GVYa~~~~~~~~~~~~~~ 79 (132)
||+||++|++||+++|++| |||+++|+|+||+++|| +||||||||.+++...+|+ .|||++|+.++ +. +|+|
T Consensus 167 ST~IR~~L~~G~v~~A~~lLGrpy~i~G~Vv~G~~~Gr-~lGfPTANl~~~~~~~~P~---~GVYa~~v~~~-~~-~~~g 240 (308)
T 3op1_A 167 STRIRQAILDGNVKEAGKLLGAPLPSRGMVVHGNARGR-TIGYPTANLVLLDRTYMPA---DGVYVVDVEIQ-RQ-KYRA 240 (308)
T ss_dssp HHHHHHHHHHTCHHHHHHHHSSCCEEEEEEEBCC-------CCCCEEEEECSSBCCCC---SEEEEEEEEET-TE-EEEE
T ss_pred HHHHHHHHHcCCHHHHHhhcCcceeEEEEEEECCccCc-ccCCCcEeecCcccccCCC---CceEEEEEEEC-CE-EEEE
Confidence 8999999999999999999 99999999999999996 6999999999876678898 89999999994 66 9999
Q ss_pred EEEecCCCccCCCceEEEEEEccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 80 VMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 80 v~niG~~Ptf~~~~~~iEvhil~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
|+|||+||||++.+.++||||| ||++|+||++|+|+|++|||+|+||+|+||
T Consensus 241 v~niG~~PT~~~~~~~vE~hil-df~~dlYG~~i~v~f~~~lR~e~kF~s~e~ 292 (308)
T 3op1_A 241 MASVGKNVTFDGEEARFEVNIF-DFNQDIYGETVMVYWLDRIRDMTKFDSVDQ 292 (308)
T ss_dssp EEEECBTTTBC--CCEEEEEET-TCCCCCTTCEEEEEEEEEEECCCCCSSHHH
T ss_pred EEEeccCCccCCCceEEEEEEe-cCCCccCCCEEEEEEHHhcCCCCCCCCHHH
Confidence 9999999999877789999999 999999999999999999999999999874
No 2
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=100.00 E-value=3.5e-47 Score=311.41 Aligned_cols=126 Identities=29% Similarity=0.530 Sum_probs=116.7
Q ss_pred cHHHHHHHHCCChhhhhcc--CCeEEEEEEEccCCCCccccCceeecccCCccccCCCCCCCceEEEEEEEcC-------
Q psy7973 2 SQSANIIKQNGVCHQAKDK--YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSD------- 72 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l--~py~i~G~Vv~G~~~G~~~lGfPTANl~~~~~~~lp~~~~~GVYa~~~~~~~------- 72 (132)
||+||++|++||+++|++| |||+++|+|+||++||+|+||||||||.++....+|+ .|||++|+.++.
T Consensus 164 ST~IR~~L~~G~i~~a~~lLGrpy~i~G~Vv~G~~~Gsr~lGfPTANl~~~~~~~~P~---~GVYa~~v~~~~~~~~~~~ 240 (338)
T 2x0k_A 164 STTVREFLSEGDVARANWALGRHFYVTGPVVRGAGRGGKELGFPTANQYFHDTVALPA---DGVYAGWLTILPTEAPVSG 240 (338)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTSCCEEEEECBCCSSCSSSCTTSCSEEEEECTTBCCCC---SEEEEEEEEECSCCSCCEE
T ss_pred cchHHHHHhcCcHHHHHHhcceeeEEEEEEecCcccccceecccccccCCcccccCCC---CeEEEEEEEECcccccccc
Confidence 8999999999999999999 9999999999999999447999999998766677898 899999999841
Q ss_pred ----CCeEEEEEEEecCCCccCCCceEEEEEEccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 73 ----GPTVYKMVMSIGWNPFYKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 73 ----~~~~~~~v~niG~~Ptf~~~~~~iEvhil~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
+. +|+||+|||+||||++...++||||| ||++|+||++|+|+|++|||+|+||+|+||
T Consensus 241 ~~~~~~-~~~gv~niG~~PT~~~~~~~vE~hil-df~~dlYg~~i~v~f~~~lR~e~kF~s~e~ 302 (338)
T 2x0k_A 241 NMEPEV-AYAAAISVGTNPTFGDEQRSVESFVL-DRDADLYGHDVKVEFVDHVRAMEKFDSVEQ 302 (338)
T ss_dssp SCCTTC-EEEEEEEEEEETTTCTTEEEEEEEET-TCCEECTTCEEEEEEEEEEECCCCCSSHHH
T ss_pred ccCCCC-EEEEEEEEcCCCccCCCcceEEEEee-cCCcccCCCEEEEEEehhhCCccCCCCHHH
Confidence 56 89999999999999877788999999 899999999999999999999999999874
No 3
>1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A*
Probab=100.00 E-value=9.4e-47 Score=277.94 Aligned_cols=111 Identities=55% Similarity=1.118 Sum_probs=100.4
Q ss_pred CCeEEEEEEEccCCCCccccCceeecccCCccccCCCCCCCceEEEEEEEcCCCeEEEEEEEecCCCccCCCceEEEEEE
Q psy7973 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEAVKSLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKKKSMEVHI 100 (132)
Q Consensus 21 ~py~i~G~Vv~G~~~G~~~lGfPTANl~~~~~~~lp~~~~~GVYa~~~~~~~~~~~~~~v~niG~~Ptf~~~~~~iEvhi 100 (132)
|||+++|+|+||++|||++||||||||.++....+|+++..|||++|+.+.++. +|+||+|||+||||++...+|||||
T Consensus 3 ~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~P~~~~~GVYa~~v~~~~~~-~~~gv~nIG~~PT~~~~~~~vEvhi 81 (147)
T 1nb0_A 3 LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLPADISTGIYYGWASVGSGD-VHKMVVSIGWNPYYKNTKKSMETHI 81 (147)
T ss_dssp CSEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSCTTCCSEEEEEEEEETTCC-CEEEEEEEEECSSSSSSCEEEEEEE
T ss_pred ccEEEEEEEEeCCccCccccCCccEEEEccccccCCCCCCCEEEEEEEEECCCC-EEEEEEEecCCCeECCCceEEEEEE
Confidence 899999999999999977899999999775446788444489999999995556 8999999999999987778999999
Q ss_pred ccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 101 IHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 101 l~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
||||++||||++|+|+|++|||+|+||+|+||
T Consensus 82 l~df~~dlYG~~i~v~f~~~lR~E~kF~sle~ 113 (147)
T 1nb0_A 82 MHTFKEDFYGEILNVAIVGYLRPEKNFDSLES 113 (147)
T ss_dssp SSCCSSCCTTSEEEEEEEEEEECCCCCSSHHH
T ss_pred ecCCCCccCCCEEEEEEehhccCCcCCCCHHH
Confidence 99999999999999999999999999999874
No 4
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=100.00 E-value=1.7e-46 Score=302.40 Aligned_cols=125 Identities=30% Similarity=0.393 Sum_probs=96.6
Q ss_pred cHHHHHHHHCCChhhhhcc--CCeEEEEEEEccCCCCccccCceeecccCC-ccccCCCCCCCceEEEEEEEcCCCeEEE
Q psy7973 2 SQSANIIKQNGVCHQAKDK--YPYFTKGIIVKGFGRGSKELGIPTANMCDE-AVKSLPESFDPGVYYGWSKLSDGPTVYK 78 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l--~py~i~G~Vv~G~~~G~~~lGfPTANl~~~-~~~~lp~~~~~GVYa~~~~~~~~~~~~~ 78 (132)
||+||++|++||+++|++| |||+++|+|+||+++|| +||||||||..+ ....+|+ .|||++|+.+.++. +|+
T Consensus 137 ST~IR~~L~~G~i~~a~~lLGr~y~i~G~Vv~G~~~Gr-~lGfPTaNl~~~~~~~~~P~---~GVYa~~v~~~~~~-~~~ 211 (293)
T 1mrz_A 137 SSLIRNLVQEGRVEEIPAYLGRYFEIEGIVHKDREFGR-KLGFPTANIDRGNEKLVDLK---RGVYLVRVHLPDGK-KKF 211 (293)
T ss_dssp HHHHHHHHHTTCTTTTHHHHSSCCEEEEEC------------CCCEECBCCSSCBCCCC---SEEEEEEEECGGGC-EEE
T ss_pred HhHHHHHHhcCcHHHHhhhcCCCeEEEEEEccCccccc-eecccceEeccCccCcCCCC---CeEEEEEEEEecCc-EEE
Confidence 8999999999999999999 99999999999999996 699999999876 5578898 89999999972256 899
Q ss_pred EEEEecCCCccCCC-ceEEEEEEccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 79 MVMSIGWNPFYKNK-KKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 79 ~v~niG~~Ptf~~~-~~~iEvhil~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
||+|||+||||++. ..++||||| ||++|+||++|+|+|++|||+|+||+|+||
T Consensus 212 gv~niG~~PT~~~~~~~~iE~hil-df~~dlYg~~i~v~f~~~lR~e~kF~s~~~ 265 (293)
T 1mrz_A 212 GVMNVGFRPTVGDARNVKYEVYIL-DFEGDLYGQRLKLEVLKFMRDEKKFDSIEE 265 (293)
T ss_dssp EEEEEEEC------CCEEEEEEET-TCCSCCTTCEEEEEEEEEEECCCC----CC
T ss_pred EEEEeccCcccCCCccceEEEEec-cCCcccCCCEEEEEEHHhcCCCCCCCCHHH
Confidence 99999999999875 488999999 899999999999999999999999999986
No 5
>1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A*
Probab=100.00 E-value=9.6e-45 Score=271.16 Aligned_cols=107 Identities=51% Similarity=0.991 Sum_probs=97.4
Q ss_pred CCeEEEEEEEccCCCCccccCceeecccCCc--cc-cCCCCCCCceEEEEEEEcCCCeEEEEEEEecCCCccCCCceEEE
Q psy7973 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDEA--VK-SLPESFDPGVYYGWSKLSDGPTVYKMVMSIGWNPFYKNKKKSME 97 (132)
Q Consensus 21 ~py~i~G~Vv~G~~~G~~~lGfPTANl~~~~--~~-~lp~~~~~GVYa~~~~~~~~~~~~~~v~niG~~Ptf~~~~~~iE 97 (132)
|||+++|+|+||++|||++||||||||.++. .. .+|+ .|||++|+.++ +. +|+||+|||+||||+++..+||
T Consensus 22 rpy~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~~~~p~---~GVYa~~v~~~-~~-~~~gv~nIG~~PTf~~~~~~vE 96 (163)
T 1n08_A 22 YPIRFEGKVVHGFGRGSKELGIPTANISEDAIQELLRYRD---SGVYFGYAMVQ-KR-VFPMVMSVGWNPYYKNKLRSAE 96 (163)
T ss_dssp CCEEEEEEEECCSSSCGGGGTCCCEEECGGGTTTTTTTSC---SEEEEEEEEET-TE-EEEEEEEEEECTTCSSCCEEEE
T ss_pred CCEEEEEEEEeCCccCCCccCcCCCcccCcccccccCCCC---CEEEEEEEEEC-CE-EEEEEEEeCCCCeECCCceEEE
Confidence 9999999999999999878999999997741 23 4566 89999999995 55 8999999999999987778999
Q ss_pred EEEccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 98 VHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 98 vhil~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
|||||||++||||++|+|+|++|||+|+||+|+||
T Consensus 97 vhil~df~~dlYG~~i~V~f~~~lR~E~kF~sle~ 131 (163)
T 1n08_A 97 VHLIERQGEDFYEEIMRVIVLGYIRPELNYAGLDK 131 (163)
T ss_dssp EEETTCCSCCCTTCEEEEEEEEEEECCCCCCCHHH
T ss_pred EEEecCCCCccCCCEEEEEEHHhccCCCCCCCHHH
Confidence 99999999999999999999999999999999874
No 6
>3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei}
Probab=100.00 E-value=1.2e-44 Score=274.45 Aligned_cols=108 Identities=38% Similarity=0.629 Sum_probs=85.5
Q ss_pred CCeEEEEEEEccCCCCccccCceeecccCC----ccccCCCCCCCceEEEEEEEcC--------CCeEEEEEEEecCCCc
Q psy7973 21 YPYFTKGIIVKGFGRGSKELGIPTANMCDE----AVKSLPESFDPGVYYGWSKLSD--------GPTVYKMVMSIGWNPF 88 (132)
Q Consensus 21 ~py~i~G~Vv~G~~~G~~~lGfPTANl~~~----~~~~lp~~~~~GVYa~~~~~~~--------~~~~~~~v~niG~~Pt 88 (132)
|||+++|+|+||++|||++||||||||.++ ....+|+ .|||++|+.+++ +. +|+||+|||+|||
T Consensus 16 rpy~i~G~Vv~G~~rGrr~LGfPTANl~l~~~~~~~~~~p~---~GVYa~~v~~~~~~~~~~~~~~-~~~gv~nIG~nPT 91 (181)
T 3bnw_A 16 QPFFLRGKVVHGKGRGGSQLGFPTANIGLDKDVMECLQPYK---NLVVYGWGTVSQVPGKERESFG-PYPFAASIGFNMQ 91 (181)
T ss_dssp CCEEEEEEEEC------CCSCCCCCEECCCHHHHHHHGGGT---TEEEEEEEEEEEETTEEEEEEE-EEEEEEEEECC--
T ss_pred CCeEEEEEEEeCCccCccccCCccccccccccccccccCCC---CEEEEEEEEECCcccccccCCc-eeEEEEEecCCCe
Confidence 999999999999999977899999999742 2223477 899999999843 15 8999999999999
Q ss_pred cCCCceEEEEEEccccCCCCCCCeEEEEEeeecCCCCCCCCCCC
Q psy7973 89 YKNKKKSMEVHIIHEFGRDLYDLTLSICVLGYIRPELDFNSLGT 132 (132)
Q Consensus 89 f~~~~~~iEvhil~df~~dlYg~~i~v~~~~~iR~e~kF~s~~~ 132 (132)
|+++..+|||||||||++||||++|+|+|++|||+|+||+|+||
T Consensus 92 f~~~~~~vEvhilhDF~~DlYG~~i~V~fl~~LR~E~kF~sle~ 135 (181)
T 3bnw_A 92 FDEKTLTVEPYFLHEFGWDFYGAVVKIIVLGEIRSMGSFHSLQA 135 (181)
T ss_dssp ----CCEEEEEESSCCSSCCTTCEEEEEEEEEEEECCCCSSHHH
T ss_pred ECCCeeEEEEEEcCCCCCccCCCEEEEEEehhhcCCCCCCCHHH
Confidence 98777899999999999999999999999999999999999874
No 7
>3dwl_G Actin-related protein 2/3 complex subunit 5; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=44.18 E-value=7.7 Score=27.97 Aligned_cols=22 Identities=27% Similarity=0.280 Sum_probs=18.6
Q ss_pred cHHHHHHHHCCChhhhhcc----CCe
Q psy7973 2 SQSANIIKQNGVCHQAKDK----YPY 23 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l----~py 23 (132)
++.||.+|+.||..+|-+. -||
T Consensus 40 ~~qvr~lL~~g~~~~ALk~aL~~pP~ 65 (152)
T 3dwl_G 40 IPQARSAIQTGNALQGLKTLLSYVPY 65 (152)
T ss_dssp HHHHHHHHHHSCCHHHHHHHTSSCCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCCC
Confidence 5789999999999999665 565
No 8
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=35.63 E-value=15 Score=26.35 Aligned_cols=19 Identities=11% Similarity=0.050 Sum_probs=16.7
Q ss_pred cHHHHHHHHCCChhhhhcc
Q psy7973 2 SQSANIIKQNGVCHQAKDK 20 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l 20 (132)
+++||.+|..|+..+|-+.
T Consensus 39 ~~qv~~lL~~g~~~~ALk~ 57 (151)
T 1k8k_G 39 EGEVDSCLRQGNMTAALQA 57 (151)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHH
Confidence 4789999999999999665
No 9
>2oyn_A Hypothetical protein MJ0056; structural genomics, unknown function, PSI-2, protein structure initiative; HET: CDP; 1.85A {Methanocaldococcus jannaschii DSM2661} SCOP: b.43.5.2 PDB: 2p3m_A 2vbs_A 2vbt_A* 2vbu_A* 2vbv_A*
Probab=34.75 E-value=12 Score=26.77 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=24.5
Q ss_pred CCeEEEEEEEccCCCCccc-------------cCc---e-eecccCCc
Q psy7973 21 YPYFTKGIIVKGFGRGSKE-------------LGI---P-TANMCDEA 51 (132)
Q Consensus 21 ~py~i~G~Vv~G~~~G~~~-------------lGf---P-TANl~~~~ 51 (132)
+...+.|+|+.|.|-|+.- ||| | |.|+.+++
T Consensus 5 ~~i~l~G~VvSGlGEG~~y~sl~~Y~~qf~~~LGF~PfPGTLNi~l~~ 52 (146)
T 2oyn_A 5 KLMIIEGEVVSGLGEGRYFLSLPPYKEIFKKILGFEPYEGTLNLKLDR 52 (146)
T ss_dssp CEEEEEEEEECCSSHHHHHTTSHHHHHHHHHHHSSCCCSSCEEEEEEE
T ss_pred eEEEEEEEEEccccceEEEEeCHHHHHHHHHHhCCcCCCCcEEEEeCc
Confidence 7789999999999988632 465 5 99998754
No 10
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=32.94 E-value=14 Score=26.25 Aligned_cols=12 Identities=0% Similarity=-0.213 Sum_probs=10.8
Q ss_pred cHHHHHHHHCCC
Q psy7973 2 SQSANIIKQNGV 13 (132)
Q Consensus 2 s~~ir~~l~~g~ 13 (132)
||.||+++++|+
T Consensus 132 ST~IR~~l~~G~ 143 (181)
T 1ej2_A 132 GTEVRRRMLDDG 143 (181)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 899999999885
No 11
>1keq_A F65A/Y131C-MI carbonic anhydrase V; proton transfer, engineered residue, lyase; HET: 4MZ; 1.88A {Mus musculus} SCOP: b.74.1.1 PDB: 1dmx_A 1dmy_A* 1urt_A
Probab=30.65 E-value=21 Score=27.13 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=20.6
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLYD 110 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlYg 110 (132)
-|.--|++++...+|+||.| ++.+.|+
T Consensus 82 ~gSEHtidG~~~p~ElHlVH-~n~~~y~ 108 (248)
T 1keq_A 82 WGSEHAVDGHTYPAELHLVH-WNSTKYE 108 (248)
T ss_dssp CCCSSEETTBCCSEEEEEEE-EETTTCS
T ss_pred CCCcceecccccceeEEEEE-eCCcccC
Confidence 36677777778899999997 6766663
No 12
>1jd0_A Carbonic anhydrase XII; extracellular domain, bitopic protein, type I membrane protein, lyase; HET: AZM; 1.50A {Homo sapiens} SCOP: b.74.1.1 PDB: 1jcz_A*
Probab=30.45 E-value=21 Score=27.35 Aligned_cols=27 Identities=30% Similarity=0.530 Sum_probs=21.2
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLYD 110 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlYg 110 (132)
-|.--|++++...+|+||.| ++.+.|+
T Consensus 101 ~gSEHtidG~~yp~ElHlVH-~n~~~y~ 127 (263)
T 1jd0_A 101 HGSEHTVSGQHFAAELHIVH-YNSDLYP 127 (263)
T ss_dssp CCCSSEETTBCCSEEEEEEE-EETTTCS
T ss_pred CCCceeeCCcccceeEEEEE-eCCcccC
Confidence 47777788888899999997 6766664
No 13
>1rj5_A Carbonic anhydrase XIV; beta-sheet, alpha-helix, zinc enzyme, lyase; HET: NAG BMA; 2.81A {Mus musculus} SCOP: b.74.1.1 PDB: 1rj6_A*
Probab=29.91 E-value=22 Score=27.20 Aligned_cols=26 Identities=19% Similarity=0.526 Sum_probs=20.4
Q ss_pred cCCCccCCCceEEEEEEccccCCCCCC
Q psy7973 84 GWNPFYKNKKKSMEVHIIHEFGRDLYD 110 (132)
Q Consensus 84 G~~Ptf~~~~~~iEvhil~df~~dlYg 110 (132)
|..-|++++...+|+||.| ++.|.|+
T Consensus 103 gSEHtidG~~~p~ElHlVH-~n~~~y~ 128 (261)
T 1rj5_A 103 GSEHHINSEATAAELHVVH-YDSQSYS 128 (261)
T ss_dssp CCSSEETTBCCSEEEEEEE-EETTTCS
T ss_pred CCceeeCCccccceEEEEE-eCCcccC
Confidence 6677777778899999997 7776663
No 14
>3jxg_A Receptor-type tyrosine-protein phosphatase gamma; Ca-like domain, glycoprotein, hydrolase, membrane, phosphoprotein, transmembrane, cell adhesion; 1.70A {Mus musculus} SCOP: b.74.1.0 PDB: 3kld_B* 3jxh_C
Probab=28.34 E-value=28 Score=26.81 Aligned_cols=27 Identities=19% Similarity=0.373 Sum_probs=21.3
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLYD 110 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlYg 110 (132)
-|..-|++++...+|+||.| ++.+.|+
T Consensus 108 ~gSEHtidg~~~p~ElH~VH-~n~~~y~ 134 (269)
T 3jxg_A 108 AGSEHSVNGRRFPVEMQIFF-YNPDDFD 134 (269)
T ss_dssp CCCSSEETTBCCSEEEEEEE-ECTTTCS
T ss_pred CCCcceeCCcCcceeeEEEE-ecccccC
Confidence 46677778888899999997 7777664
No 15
>2foy_A Carbonic anhydrase 1; lyase, zinc, inhibitor, copper; HET: B30; 1.55A {Homo sapiens} SCOP: b.74.1.1 PDB: 1bzm_A* 1czm_A* 1azm_A 1hug_A 1huh_A 1hcb_A* 2fw4_A* 2nmx_A* 2nn1_A* 2nn7_A* 3lxe_A* 1jv0_A 1j9w_A 1crm_A 2cab_A 2it4_A
Probab=27.47 E-value=25 Score=26.82 Aligned_cols=26 Identities=27% Similarity=0.364 Sum_probs=19.8
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLY 109 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlY 109 (132)
-|.--|++++...+|+||.| ++.+.|
T Consensus 103 ~gSEHtidg~~~p~ElHlVH-~n~~~y 128 (260)
T 2foy_A 103 HGSEHTVDGVKYSAELHVAH-WNSAKY 128 (260)
T ss_dssp CCCSSEETTBCCSEEEEEEE-EETTTC
T ss_pred CCCccccccccCCceeEEEE-eccccc
Confidence 36666777778889999997 676666
No 16
>3d0n_A Carbonic anhydrase 13; lyase, metal-binding, metal binding PROT; HET: GOL; 1.55A {Homo sapiens} PDB: 3czv_A* 3da2_A*
Probab=26.93 E-value=26 Score=26.80 Aligned_cols=26 Identities=23% Similarity=0.465 Sum_probs=20.1
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLY 109 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlY 109 (132)
-|.--|++++...+|+||.| ++.+.|
T Consensus 106 ~gSEHtidG~~~p~ElHlVH-~n~~~y 131 (264)
T 3d0n_A 106 HGSEHIVDGVSYAAELHVVH-WNSDKY 131 (264)
T ss_dssp BCCSSEETTBCCSEEEEEEE-EETTTC
T ss_pred CCCccccccccCCceeEEEE-eCCccc
Confidence 36677777778899999997 676666
No 17
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=26.49 E-value=20 Score=27.31 Aligned_cols=14 Identities=14% Similarity=-0.135 Sum_probs=12.2
Q ss_pred cHHHHHHHHCCChh
Q psy7973 2 SQSANIIKQNGVCH 15 (132)
Q Consensus 2 s~~ir~~l~~g~i~ 15 (132)
||.||++|++|+..
T Consensus 141 ST~IR~~l~~g~~~ 154 (341)
T 2qjo_A 141 STAIRGAYFEGKEG 154 (341)
T ss_dssp HHHHHHHHHHTCGG
T ss_pred cHHHHHHHHcCCCc
Confidence 89999999999853
No 18
>2w2j_A Carbonic anhydrase-related protein; lyase, metal-binding; 1.60A {Homo sapiens}
Probab=26.16 E-value=27 Score=27.18 Aligned_cols=25 Identities=32% Similarity=0.518 Sum_probs=18.1
Q ss_pred cCCCccCCCceEEEEEEccccCCCCC
Q psy7973 84 GWNPFYKNKKKSMEVHIIHEFGRDLY 109 (132)
Q Consensus 84 G~~Ptf~~~~~~iEvhil~df~~dlY 109 (132)
|.--|++++...+|+||.| ++.+.|
T Consensus 127 gSEHtIdG~~yp~ElHlVH-~n~~~y 151 (291)
T 2w2j_A 127 GSEHTVNFKAFPMELHLIH-WNSTLF 151 (291)
T ss_dssp CCSSEETTBCCSEEEEEEE-EETTTC
T ss_pred CccceeCCccCCEeeeeee-eCcccc
Confidence 5566666777788999996 666555
No 19
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=25.69 E-value=25 Score=27.04 Aligned_cols=12 Identities=17% Similarity=0.097 Sum_probs=11.0
Q ss_pred cHHHHHHHHCCC
Q psy7973 2 SQSANIIKQNGV 13 (132)
Q Consensus 2 s~~ir~~l~~g~ 13 (132)
||.||++|++|+
T Consensus 223 ST~IR~~l~~g~ 234 (279)
T 1kqn_A 223 STKIRRALRRGQ 234 (279)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 899999999995
No 20
>3jxf_A Receptor-type tyrosine-protein phosphatase zeta; Ca-like domain, alternative splicing, glycoprotein, hydrolase, membrane, polymorphism; 2.00A {Homo sapiens} SCOP: b.74.1.0 PDB: 3s97_A*
Probab=25.40 E-value=34 Score=26.43 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=20.1
Q ss_pred ecCCCccCCCceEEEEEEccccCCCCCC
Q psy7973 83 IGWNPFYKNKKKSMEVHIIHEFGRDLYD 110 (132)
Q Consensus 83 iG~~Ptf~~~~~~iEvhil~df~~dlYg 110 (132)
-|..-|++++...+|+||.| ++.+.|+
T Consensus 108 ~gSEHtidG~~~p~ElHlVH-~n~~~y~ 134 (272)
T 3jxf_A 108 DGSEHSLEGQKFPLEMQIYC-FDADRFS 134 (272)
T ss_dssp CCCSSEETTBCCSEEEEEEE-ECTTTCS
T ss_pred CCCcceecceecccceeEEE-ecccccC
Confidence 46666777778899999997 6665553
No 21
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=25.17 E-value=41 Score=27.14 Aligned_cols=19 Identities=11% Similarity=0.025 Sum_probs=16.4
Q ss_pred cHHHHHHHHCCChhhhhcc
Q psy7973 2 SQSANIIKQNGVCHQAKDK 20 (132)
Q Consensus 2 s~~ir~~l~~g~i~~a~~l 20 (132)
.|+||++|.+|+++....+
T Consensus 229 AS~IR~~i~~g~~~~~~~l 247 (357)
T 3gmi_A 229 GTKIREAIFSGKFEDIKNM 247 (357)
T ss_dssp HHHHHHHHHTTCGGGTGGG
T ss_pred HHHHHHHHHcCChhHHHhc
Confidence 3789999999998887776
No 22
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=21.78 E-value=34 Score=25.68 Aligned_cols=12 Identities=8% Similarity=-0.047 Sum_probs=10.4
Q ss_pred cHHHHHHHHCCC
Q psy7973 2 SQSANIIKQNGV 13 (132)
Q Consensus 2 s~~ir~~l~~g~ 13 (132)
||.||+++++|.
T Consensus 202 ST~IR~~~~~g~ 213 (252)
T 1nup_A 202 ATYIRRALGQGQ 213 (252)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 889999999873
No 23
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=21.77 E-value=29 Score=24.17 Aligned_cols=12 Identities=17% Similarity=0.025 Sum_probs=10.5
Q ss_pred cHHHHHHHHCCC
Q psy7973 2 SQSANIIKQNGV 13 (132)
Q Consensus 2 s~~ir~~l~~g~ 13 (132)
||.||+.+++|+
T Consensus 126 ST~IR~~~~~g~ 137 (168)
T 1f9a_A 126 GTEIRRRMLNGE 137 (168)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 789999999875
No 24
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=21.66 E-value=34 Score=25.61 Aligned_cols=12 Identities=8% Similarity=0.113 Sum_probs=10.6
Q ss_pred cHHHHHHHHCCC
Q psy7973 2 SQSANIIKQNGV 13 (132)
Q Consensus 2 s~~ir~~l~~g~ 13 (132)
||.||+++++|+
T Consensus 199 ST~IR~~i~~g~ 210 (242)
T 1yum_A 199 ATQIRALLGAGR 210 (242)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 789999999885
Done!